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[1][TOP]
>UniRef100_Q99367 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99367_SOYBN
Length = 494
Score = 285 bits (730), Expect = 8e-76
Identities = 132/136 (97%), Positives = 135/136 (99%)
Frame = +2
Query: 5 LQLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAF 184
LQLPSYMDGLDFGMTP RSPISGTPYHEG+MSPSY+LSPNLRLSPT+DAQFSPYVGGMAF
Sbjct: 143 LQLPSYMDGLDFGMTPARSPISGTPYHEGLMSPSYLLSPNLRLSPTSDAQFSPYVGGMAF 202
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT
Sbjct: 203 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 262
Query: 365 SPAYSPTSPSYSPTSP 412
SPAYSPTSPSYSPTSP
Sbjct: 263 SPAYSPTSPSYSPTSP 278
Score = 146 bits (369), Expect = 6e-34
Identities = 76/106 (71%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 284 SPSYSPTSPSY--SPTSPS-YSPT--SPAYSPTS-PAYSPTSPSYSPTSPSYSPTSPSYS 337
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SPGYSPTSP+YSPTSPSYSPTSP
Sbjct: 338 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSP 383
Score = 138 bits (348), Expect = 2e-31
Identities = 73/105 (69%), Positives = 82/105 (78%), Gaps = 1/105 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 291 SPSYSPTSPSY--SPTSPA-YSPT--SPAYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 344
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
PTSP YSPTSP YSPTSP YSP+SP YSPTSP+YSPTSPSY+P S
Sbjct: 345 PTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQS 389
Score = 130 bits (327), Expect = 5e-29
Identities = 77/138 (55%), Positives = 85/138 (61%), Gaps = 33/138 (23%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SP SPT+ A +SP ++SPTS SP YSP+SP YSP+SP YSP
Sbjct: 298 SPSYSPTSP--AYSPTSPA-YSPT--SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 352
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG--------------------------YS 358
TSP YSPTSPGYSPTSP YSPTSP+YSP+SP YS
Sbjct: 353 TSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYS 412
Query: 359 PTSPAYSPTSPSYSPTSP 412
PTSP YSPTSPSYSPTSP
Sbjct: 413 PTSPNYSPTSPSYSPTSP 430
Score = 118 bits (296), Expect = 2e-25
Identities = 71/132 (53%), Positives = 81/132 (61%), Gaps = 27/132 (20%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY- 271
SPSY SP+ SPT+ + +SP A+SPTS PGYSP+SP YSP+SP YSPTSP Y
Sbjct: 333 SPSYSPTSPSY--SPTSPS-YSPT--SPAYSPTS-PGYSPTSPSYSPTSPSYSPTSPSYN 386
Query: 272 -------------------------SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPTSP YSPTSP YSPTSP+YSPSSP YSP+SP
Sbjct: 387 PQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN 446
Query: 377 SPTSPSYSPTSP 412
S SP YSP+SP
Sbjct: 447 SGVSPDYSPSSP 458
Score = 114 bits (286), Expect = 3e-24
Identities = 69/127 (54%), Positives = 82/127 (64%), Gaps = 6/127 (4%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+PG SP S + SPSY SP SP+ + Q + Y +A+SP SSP SPSSP
Sbjct: 361 SPGYSPTSPS---YSPTSPSY--SPT---SPSYNPQSAKYSPSLAYSP-SSPRLSPSSP- 410
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP------AYSPTS 388
YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP S SP YSP+SP YSP+
Sbjct: 411 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDYSPSSPQFSPSTGYSPSQ 470
Query: 389 PSYSPTS 409
P YSP+S
Sbjct: 471 PGYSPSS 477
Score = 107 bits (267), Expect = 4e-22
Identities = 68/131 (51%), Positives = 79/131 (60%), Gaps = 27/131 (20%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGY-------- 250
SPSY SP+ SPT+ A +SP G +SPTS P YSP+SP YSP+SP Y
Sbjct: 340 SPSYSPTSPSY--SPTSPA-YSPTSPG--YSPTS-PSYSPTSPSYSPTSPSYNPQSAKYS 393
Query: 251 ------------------SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP Y
Sbjct: 394 PSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPDY 453
Query: 377 SPTSPSYSPTS 409
SP+SP +SP++
Sbjct: 454 SPSSPQFSPST 464
Score = 57.4 bits (137), Expect = 5e-07
Identities = 38/82 (46%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Frame = +2
Query: 59 SPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSP 235
SP S T + SPSY SP+ S + SPY G+ SP YSPSSP +SP
Sbjct: 409 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGV------SPDYSPSSPQFSP 462
Query: 236 SSPGYSPTSPGYSPTSPG-YSP 298
S+ GYSP+ PGYSP+S Y+P
Sbjct: 463 ST-GYSPSQPGYSPSSTSQYTP 483
[2][TOP]
>UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA
binding / DNA-directed RNA polymerase n=1 Tax=Vitis
vinifera RepID=UPI0001985649
Length = 1848
Score = 279 bits (713), Expect = 8e-74
Identities = 128/136 (94%), Positives = 133/136 (97%)
Frame = +2
Query: 5 LQLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAF 184
LQLPSYM+GLDFGMTP RSPI+GTPYH+GMMSP+Y+LSPNLRLSP DAQFSPYVGGMAF
Sbjct: 1476 LQLPSYMEGLDFGMTPSRSPITGTPYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAF 1535
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT
Sbjct: 1536 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 1595
Query: 365 SPAYSPTSPSYSPTSP 412
SPAYSPTSPSYSPTSP
Sbjct: 1596 SPAYSPTSPSYSPTSP 1611
Score = 147 bits (370), Expect = 5e-34
Identities = 73/105 (69%), Positives = 80/105 (76%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP + +SP A+SPTS P YSP+SP YSP+SP YSPTSP YSP
Sbjct: 1638 SPSY--SPTSPVYSPTSPSYSPT--SPAYSPTS-PAYSPTSPSYSPTSPSYSPTSPSYSP 1692
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP YSP+SPGYSPTSP+YSPTSPSYSPTSP
Sbjct: 1693 TSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSP 1737
Score = 145 bits (366), Expect = 1e-33
Identities = 77/130 (59%), Positives = 86/130 (66%), Gaps = 8/130 (6%)
Frame = +2
Query: 47 TPGRSPISGT--PYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS------SP 202
+PG SP S T P G S SP +SP ++SPTS SP
Sbjct: 1575 SPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPT--SPSYSPTSPSYSPTSP 1632
Query: 203 GYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 382
YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSP
Sbjct: 1633 SYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSP 1692
Query: 383 TSPSYSPTSP 412
TSPSYSPTSP
Sbjct: 1693 TSPSYSPTSP 1702
Score = 144 bits (362), Expect = 4e-33
Identities = 80/129 (62%), Positives = 92/129 (71%), Gaps = 7/129 (5%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPG 205
+PG SP S SPSY SP+ SPT+ + +SP ++SPTS SP
Sbjct: 1589 SPGYSPTSPA---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTSPSYSPTSPS 1640
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPT
Sbjct: 1641 YSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1700
Query: 386 SPSYSPTSP 412
SPSYSPTSP
Sbjct: 1701 SPSYSPTSP 1709
Score = 138 bits (347), Expect = 2e-31
Identities = 71/104 (68%), Positives = 80/104 (76%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YSP
Sbjct: 1652 SPSY--------SPTSPA-YSPT--SPAYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYSP 1699
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
TSP YSPTSP YSPTSP YSP+SP YSPTSP+YSPTSPSY+P+S
Sbjct: 1700 TSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSS 1743
Score = 128 bits (322), Expect = 2e-28
Identities = 72/131 (54%), Positives = 82/131 (62%), Gaps = 26/131 (19%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSPGYSP
Sbjct: 1673 SPSY--------SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPAYSPTSPGYSP 1720
Query: 278 TSPGYSPTSPGYSPTSPT--------------------------YSPSSPGYSPTSPAYS 379
TSP YSPTSP YSPTSP+ YSP+SP YSPTSP+YS
Sbjct: 1721 TSPSYSPTSPSYSPTSPSYNPSSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYS 1780
Query: 380 PTSPSYSPTSP 412
PTSPSYSP SP
Sbjct: 1781 PTSPSYSPASP 1791
Score = 119 bits (297), Expect = 1e-25
Identities = 71/132 (53%), Positives = 81/132 (61%), Gaps = 27/132 (20%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY- 271
SPSY SP+ SPT+ + +SP A+SPTS PGYSP+SP YSP+SP YSPTSP Y
Sbjct: 1687 SPSYSPTSPSY--SPTSPS-YSPT--SPAYSPTS-PGYSPTSPSYSPTSPSYSPTSPSYN 1740
Query: 272 -------------------------SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1741 PSSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPASPTYSPTSPYN 1800
Query: 377 SPTSPSYSPTSP 412
S SP YSP+SP
Sbjct: 1801 SGVSPDYSPSSP 1812
Score = 115 bits (287), Expect = 2e-24
Identities = 71/128 (55%), Positives = 82/128 (64%), Gaps = 7/128 (5%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+PG SP S + SPSY SP SP+ + + Y +A+SP SSP SPSSP
Sbjct: 1715 SPGYSPTSPS---YSPTSPSY--SPT---SPSYNPSSAKYSPSLAYSP-SSPRLSPSSP- 1764
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP-------TYSPSSPGYSPTSPAYSPT 385
YSP+SP YSPTSP YSPTSP YSP SP YSPTSP YSPSSP YSP S YSP+
Sbjct: 1765 YSPTSPNYSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSP-SAGYSPS 1823
Query: 386 SPSYSPTS 409
+P YSP+S
Sbjct: 1824 APGYSPSS 1831
[3][TOP]
>UniRef100_A7NVN7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7NVN7_VITVI
Length = 1010
Score = 279 bits (713), Expect = 8e-74
Identities = 128/136 (94%), Positives = 133/136 (97%)
Frame = +2
Query: 5 LQLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAF 184
LQLPSYM+GLDFGMTP RSPI+GTPYH+GMMSP+Y+LSPNLRLSP DAQFSPYVGGMAF
Sbjct: 713 LQLPSYMEGLDFGMTPSRSPITGTPYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAF 772
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT
Sbjct: 773 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 832
Query: 365 SPAYSPTSPSYSPTSP 412
SPAYSPTSPSYSPTSP
Sbjct: 833 SPAYSPTSPSYSPTSP 848
Score = 147 bits (370), Expect = 5e-34
Identities = 73/105 (69%), Positives = 80/105 (76%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP + +SP A+SPTS P YSP+SP YSP+SP YSPTSP YSP
Sbjct: 875 SPSY--SPTSPVYSPTSPSYSPT--SPAYSPTS-PAYSPTSPSYSPTSPSYSPTSPSYSP 929
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP YSP+SPGYSPTSP+YSPTSPSYSPTSP
Sbjct: 930 TSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSP 974
Score = 145 bits (366), Expect = 1e-33
Identities = 77/130 (59%), Positives = 86/130 (66%), Gaps = 8/130 (6%)
Frame = +2
Query: 47 TPGRSPISGT--PYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS------SP 202
+PG SP S T P G S SP +SP ++SPTS SP
Sbjct: 812 SPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPT--SPSYSPTSPSYSPTSP 869
Query: 203 GYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 382
YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSP
Sbjct: 870 SYSPTSPSYSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSP 929
Query: 383 TSPSYSPTSP 412
TSPSYSPTSP
Sbjct: 930 TSPSYSPTSP 939
Score = 144 bits (362), Expect = 4e-33
Identities = 80/129 (62%), Positives = 92/129 (71%), Gaps = 7/129 (5%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPG 205
+PG SP S SPSY SP+ SPT+ + +SP ++SPTS SP
Sbjct: 826 SPGYSPTSPA---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTSPSYSPTSPS 877
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPT
Sbjct: 878 YSPTSPVYSPTSPSYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 937
Query: 386 SPSYSPTSP 412
SPSYSPTSP
Sbjct: 938 SPSYSPTSP 946
Score = 138 bits (347), Expect = 2e-31
Identities = 71/104 (68%), Positives = 80/104 (76%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YSP
Sbjct: 889 SPSY--------SPTSPA-YSPT--SPAYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYSP 936
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
TSP YSPTSP YSPTSP YSP+SP YSPTSP+YSPTSPSY+P+S
Sbjct: 937 TSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSS 980
Score = 123 bits (309), Expect = 6e-27
Identities = 67/105 (63%), Positives = 78/105 (74%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSPGYSP
Sbjct: 910 SPSY--------SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPAYSPTSPGYSP 957
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP+Y+PSS YSP S AYSP+SP SP+SP
Sbjct: 958 TSPSYSPTSPSYSPTSPSYNPSSAKYSP-SLAYSPSSPRLSPSSP 1001
[4][TOP]
>UniRef100_Q99366 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99366_SOYBN
Length = 625
Score = 273 bits (698), Expect = 4e-72
Identities = 126/136 (92%), Positives = 131/136 (96%)
Frame = +2
Query: 5 LQLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAF 184
LQLPSYMDGLDFGMTP RSPISGTPYHEG+MSPSY+LSPNLRLSPT DAQFSPYVGGMAF
Sbjct: 303 LQLPSYMDGLDFGMTPARSPISGTPYHEGLMSPSYLLSPNLRLSPTTDAQFSPYVGGMAF 362
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSP YSP+SP YSP+SP YSPT
Sbjct: 363 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 422
Query: 365 SPAYSPTSPSYSPTSP 412
SP+YSPTSPSYSPTSP
Sbjct: 423 SPSYSPTSPSYSPTSP 438
Score = 147 bits (372), Expect = 3e-34
Identities = 77/106 (72%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 444 SPSYSPTSPSY--SPTSPA-YSPT--SPAYSPTS-PAYSPTSPSYSPTSPSYSPTSPSYS 497
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SPGYSPTSP+YSPTSPSYSPTSP
Sbjct: 498 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSP 543
Score = 133 bits (334), Expect = 7e-30
Identities = 71/110 (64%), Positives = 81/110 (73%), Gaps = 7/110 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SP SPT+ A +SP A+SPTS SP YSP+SP YSP+SP YSP
Sbjct: 451 SPSYSPTSP--AYSPTSPA-YSPT--SPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 505
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
TSP YSPTSP YSPTSPGYSPTSP+YSP+SP YSPTSP+Y+P S YSP+
Sbjct: 506 TSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPS 555
Score = 129 bits (323), Expect = 1e-28
Identities = 72/131 (54%), Positives = 83/131 (63%), Gaps = 26/131 (19%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSPGYSP
Sbjct: 479 SPSY--------SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPAYSPTSPGYSP 526
Query: 278 TSPGYSPTSPGYSPTSPTY--------------------------SPSSPGYSPTSPAYS 379
TSP YSPTSP YSPTSP+Y SP+SP YSPTSP+YS
Sbjct: 527 TSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYS 586
Query: 380 PTSPSYSPTSP 412
PTSPSYSP+SP
Sbjct: 587 PTSPSYSPSSP 597
Score = 112 bits (279), Expect = 2e-23
Identities = 67/127 (52%), Positives = 80/127 (62%), Gaps = 24/127 (18%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SPGYSP+SP YSPTSP YS
Sbjct: 486 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PAYSPTSPGYSPTSPSYSPTSPSYS 539
Query: 275 PTSPGY-----------------------SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
PTSP Y SP YSPTSP YSP+SP YSPTSP+YSP+
Sbjct: 540 PTSPSYNPQSAKYSPSLAYSPSSPRLSPSSP----YSPTSPNYSPTSPSYSPTSPSYSPS 595
Query: 386 SPSYSPT 406
SP+YSP+
Sbjct: 596 SPTYSPS 602
Score = 88.6 bits (218), Expect = 2e-16
Identities = 55/99 (55%), Positives = 62/99 (62%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+PG SP S + SPSY SP SP+ + Q + Y +A YSPSSP
Sbjct: 521 SPGYSPTSPS---YSPTSPSY--SPT---SPSYNPQSAKYSPSLA--------YSPSSPR 564
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPS 343
SPSSP YSPTSP YSPTSP YSPTSP YSP+SPTYSPS
Sbjct: 565 LSPSSP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 602
[5][TOP]
>UniRef100_B9SXC0 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9SXC0_RICCO
Length = 1855
Score = 273 bits (697), Expect = 6e-72
Identities = 126/136 (92%), Positives = 130/136 (95%)
Frame = +2
Query: 5 LQLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAF 184
LQLPSYMDGLDFGMTP RSP+S TPYH+GMMSPSY+LSP+LRLSPT DAQFSPYV GM F
Sbjct: 1476 LQLPSYMDGLDFGMTPARSPVSVTPYHDGMMSPSYLLSPSLRLSPTTDAQFSPYVSGMPF 1535
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SPT SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT
Sbjct: 1536 SPTLSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 1595
Query: 365 SPAYSPTSPSYSPTSP 412
SPAYSPTSPSYSPTSP
Sbjct: 1596 SPAYSPTSPSYSPTSP 1611
Score = 146 bits (368), Expect = 8e-34
Identities = 76/106 (71%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1631 SPSYSPTSPSY--SPTSPV-YSPT--SPAYSPTS-PAYSPTSPSYSPTSPSYSPTSPSYS 1684
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SPGYSPTSP+YSPTSPSYSPTSP
Sbjct: 1685 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSP 1730
Score = 145 bits (367), Expect = 1e-33
Identities = 76/124 (61%), Positives = 85/124 (68%), Gaps = 2/124 (1%)
Frame = +2
Query: 47 TPGRSPISGT--PYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
+PG SP S T P G S SP +SP ++SPTS P YSP+S
Sbjct: 1575 SPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTS 1631
Query: 221 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 400
P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYS
Sbjct: 1632 PSYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1691
Query: 401 PTSP 412
PTSP
Sbjct: 1692 PTSP 1695
Score = 138 bits (347), Expect = 2e-31
Identities = 73/105 (69%), Positives = 82/105 (78%), Gaps = 1/105 (0%)
Frame = +2
Query: 98 SPSYMLSPNLRL-SPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1638 SPSY--SPTSPVYSPTSPA-YSPT--SPAYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1691
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
PTSP YSPTSP YSPTSP YSP+SP YSPTSP+YSPTSPSY+P S
Sbjct: 1692 PTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPQS 1736
Score = 129 bits (323), Expect = 1e-28
Identities = 72/131 (54%), Positives = 83/131 (63%), Gaps = 26/131 (19%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSPGYSP
Sbjct: 1666 SPSY--------SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPAYSPTSPGYSP 1713
Query: 278 TSPGYSPTSPGYSPTSPT--------------------------YSPSSPGYSPTSPAYS 379
TSP YSPTSP YSPTSP+ YSP+SP YSPTSP+YS
Sbjct: 1714 TSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYS 1773
Query: 380 PTSPSYSPTSP 412
PTSPSYSP+SP
Sbjct: 1774 PTSPSYSPSSP 1784
Score = 117 bits (292), Expect = 5e-25
Identities = 70/132 (53%), Positives = 80/132 (60%), Gaps = 27/132 (20%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY- 271
SPSY SP+ SPT+ + +SP A+SPTS PGYSP+SP YSP+SP YSPTSP Y
Sbjct: 1680 SPSYSPTSPSY--SPTSPS-YSPT--SPAYSPTS-PGYSPTSPSYSPTSPSYSPTSPSYN 1733
Query: 272 -------------------------SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPTSP YSPTSP YSPTSP+YSPSSP YSP+SP
Sbjct: 1734 PQSAKYSPSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYN 1793
Query: 377 SPTSPSYSPTSP 412
S P YSP+SP
Sbjct: 1794 SGVGPDYSPSSP 1805
Score = 115 bits (289), Expect = 1e-24
Identities = 71/128 (55%), Positives = 84/128 (65%), Gaps = 7/128 (5%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+PG SP S + SPSY SP SP+ + Q + Y +A+SP SSP SPSSP
Sbjct: 1708 SPGYSPTSPS---YSPTSPSY--SPT---SPSYNPQSAKYSPSLAYSP-SSPRLSPSSP- 1757
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP-------TYSPSSPGYSPTSPAYSPT 385
YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP YSPSSP YSP S YSP+
Sbjct: 1758 YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVGPDYSPSSPQYSP-SAGYSPS 1816
Query: 386 SPSYSPTS 409
+P YSP+S
Sbjct: 1817 APGYSPSS 1824
Score = 107 bits (267), Expect = 4e-22
Identities = 68/131 (51%), Positives = 78/131 (59%), Gaps = 27/131 (20%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGY-------- 250
SPSY SP+ SPT+ A +SP G +SPTS P YSP+SP YSP+SP Y
Sbjct: 1687 SPSYSPTSPSY--SPTSPA-YSPTSPG--YSPTS-PSYSPTSPSYSPTSPSYNPQSAKYS 1740
Query: 251 ------------------SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S P Y
Sbjct: 1741 PSLAYSPSSPRLSPSSPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVGPDY 1800
Query: 377 SPTSPSYSPTS 409
SP+SP YSP++
Sbjct: 1801 SPSSPQYSPSA 1811
Score = 53.1 bits (126), Expect = 9e-06
Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Frame = +2
Query: 59 SPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMA--FSPTSSPGYSPSSPGY 229
SP S T + SPSY SP+ S + SPY G+ +SP SSP YSPS+ GY
Sbjct: 1756 SPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVGPDYSP-SSPQYSPSA-GY 1813
Query: 230 SPSSPGYSPTSPG-YSPTSPGYSPTSPG 310
SPS+PGYSP+S Y+ TS T G
Sbjct: 1814 SPSAPGYSPSSTSQYTQTSTKDDRTDKG 1841
[6][TOP]
>UniRef100_Q4QZ03 DNA-directed RNA polymerase (Fragment) n=1 Tax=Solanum tuberosum
RepID=Q4QZ03_SOLTU
Length = 361
Score = 271 bits (694), Expect = 1e-71
Identities = 125/137 (91%), Positives = 133/137 (97%), Gaps = 1/137 (0%)
Frame = +2
Query: 5 LQLPSYMDG-LDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMA 181
+ LPSYM+G L+FGMTPGRSPISGTPYH+GMMSP+Y+LSPN+R+SP DAQFSPYVGGMA
Sbjct: 55 IPLPSYMEGGLEFGMTPGRSPISGTPYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMA 114
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP
Sbjct: 115 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 174
Query: 362 TSPAYSPTSPSYSPTSP 412
TSPAYSPTSPSYSPTSP
Sbjct: 175 TSPAYSPTSPSYSPTSP 191
Score = 141 bits (356), Expect = 2e-32
Identities = 78/123 (63%), Positives = 88/123 (71%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRL-SPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S + SPSY SP + SPT+ A +SP A+SPTS P YSP+ P
Sbjct: 190 SPSYSPTSSS---YSPTSPSY--SPTSPIYSPTSPA-YSPT--SPAYSPTS-PAYSPTLP 240
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+ P YSPTSP YSPTSP YSPTSP YSPT P YSP+SPGYSPTSP+YSPTSPSYSP
Sbjct: 241 SYSPTLPSYSPTSPSYSPTSPSYSPTSPSYSPTFPAYSPTSPGYSPTSPSYSPTSPSYSP 300
Query: 404 TSP 412
TSP
Sbjct: 301 TSP 303
Score = 128 bits (321), Expect = 2e-28
Identities = 71/130 (54%), Positives = 80/130 (61%), Gaps = 25/130 (19%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SP+Y SP L +SP ++SPTS P YSP+SP YSP+ P YSPTSPGYSP
Sbjct: 232 SPAY--SPTLPSYSPTLPSYSPT--SPSYSPTS-PSYSPTSPSYSPTFPAYSPTSPGYSP 286
Query: 278 TSPGYSPTSPGYSPTSPTY-------------------------SPSSPGYSPTSPAYSP 382
TSP YSPTSP YSPTSP+Y SPSSP YSPTSP+YSP
Sbjct: 287 TSPSYSPTSPSYSPTSPSYNPSARYSPSLAYSPTSPKLSPSSPYSPSSPSYSPTSPSYSP 346
Query: 383 TSPSYSPTSP 412
TSPSYSP+SP
Sbjct: 347 TSPSYSPSSP 356
Score = 126 bits (316), Expect = 9e-28
Identities = 73/136 (53%), Positives = 85/136 (62%), Gaps = 31/136 (22%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMA-----FSPTSSPGYSPSSPGYSPSSPGYSPT 259
SP+Y SP SPT+ A +SP + + +SPTS P YSP+SP YSP+SP YSPT
Sbjct: 218 SPAYSPTSP--AYSPTSPA-YSPTLPSYSPTLPSYSPTS-PSYSPTSPSYSPTSPSYSPT 273
Query: 260 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-------------------------YSPT 364
P YSPTSPGYSPTSP YSPTSP+YSP+SP YSP+
Sbjct: 274 FPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSLAYSPTSPKLSPSSPYSPS 333
Query: 365 SPAYSPTSPSYSPTSP 412
SP+YSPTSPSYSPTSP
Sbjct: 334 SPSYSPTSPSYSPTSP 349
Score = 120 bits (300), Expect = 6e-26
Identities = 70/145 (48%), Positives = 85/145 (58%), Gaps = 25/145 (17%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P SP S P + + PSY SP L +SP ++SPTS P YSP+ P
Sbjct: 225 SPAYSPTS--PAYSPTL-PSY--SPTLPSYSPTSPSYSPT--SPSYSPTS-PSYSPTFPA 276
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGY-------------------------SPTSPT 331
YSP+SPGYSPTSP YSPTSP YSPTSP Y SP+SP+
Sbjct: 277 YSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSLAYSPTSPKLSPSSPYSPSSPS 336
Query: 332 YSPSSPGYSPTSPAYSPTSPSYSPT 406
YSP+SP YSPTSP+YSP+SP+YSP+
Sbjct: 337 YSPTSPSYSPTSPSYSPSSPTYSPS 361
Score = 98.6 bits (244), Expect = 2e-19
Identities = 67/143 (46%), Positives = 77/143 (53%), Gaps = 25/143 (17%)
Frame = +2
Query: 11 LPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
LPSY L P SP S + SPSY SPT+ + +SP A+SP
Sbjct: 239 LPSYSPTL-----PSYSPTSPS---YSPTSPSY--------SPTSPS-YSPTFP--AYSP 279
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGY-------------------------SPTSPGYS 295
TS PGYSP+SP YSP+SP YSPTSP Y SP+SP YS
Sbjct: 280 TS-PGYSPTSPSYSPTSPSYSPTSPSYNPSARYSPSLAYSPTSPKLSPSSPYSPSSPSYS 338
Query: 296 PTSPGYSPTSPTYSPSSPGYSPT 364
PTSP YSPTSP+YSPSSP YSP+
Sbjct: 339 PTSPSYSPTSPSYSPSSPTYSPS 361
[7][TOP]
>UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis
thaliana RepID=RPB1_ARATH
Length = 1840
Score = 266 bits (679), Expect = 7e-70
Identities = 120/136 (88%), Positives = 131/136 (96%)
Frame = +2
Query: 5 LQLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAF 184
LQLPSYMDGL+FGMTP RSP+SGTPYHEGMMSP+Y+LSPN+RLSP +DAQFSPYVGGMAF
Sbjct: 1478 LQLPSYMDGLEFGMTPARSPVSGTPYHEGMMSPNYLLSPNMRLSPMSDAQFSPYVGGMAF 1537
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SP+SSPGYSPSSPGYSP+SPGYSPTSPGYSPTSPGYSPTSP YSP+SP YSP+SP YSPT
Sbjct: 1538 SPSSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 1597
Query: 365 SPAYSPTSPSYSPTSP 412
SP+YSPTSPSYSPTSP
Sbjct: 1598 SPSYSPTSPSYSPTSP 1613
Score = 146 bits (368), Expect = 8e-34
Identities = 76/106 (71%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1626 SPSYSPTSPSY--SPTSPA-YSPT--SPAYSPTS-PAYSPTSPSYSPTSPSYSPTSPSYS 1679
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SPGYSPTSP+YSPTSPSY PTSP
Sbjct: 1680 PTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSP 1725
Score = 131 bits (330), Expect = 2e-29
Identities = 70/110 (63%), Positives = 80/110 (72%), Gaps = 7/110 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SP SPT+ A +SP A+SPTS SP YSP+SP YSP+SP YSP
Sbjct: 1633 SPSYSPTSP--AYSPTSPA-YSPT--SPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1687
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
TSP YSPTSP YSPTSPGYSPTSP+YSP+SP Y PTSP+Y+P S YSP+
Sbjct: 1688 TSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYGPTSPSYNPQSAKYSPS 1737
Score = 112 bits (280), Expect = 1e-23
Identities = 71/144 (49%), Positives = 81/144 (56%), Gaps = 40/144 (27%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY- 271
SPSY SP+ SPT+ + +SP A+SPTS PGYSP+SP YSP+SP Y PTSP Y
Sbjct: 1675 SPSYSPTSPSY--SPTSPS-YSPT--SPAYSPTS-PGYSPTSPSYSPTSPSYGPTSPSYN 1728
Query: 272 -------------------------SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP-- 370
SPTSP YSPTSP YSPTSP+YSPSSP YSP+SP
Sbjct: 1729 PQSAKYSPSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYS 1788
Query: 371 -----------AYSPTSPSYSPTS 409
YSPT P YSP+S
Sbjct: 1789 SGASPDYSPSAGYSPTLPGYSPSS 1812
Score = 106 bits (265), Expect = 7e-22
Identities = 69/132 (52%), Positives = 76/132 (57%), Gaps = 27/132 (20%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGY-------- 250
SPSY SP+ SPT+ A +SP G +SPTS P YSP+SP Y P+SP Y
Sbjct: 1682 SPSYSPTSPSY--SPTSPA-YSPTSPG--YSPTS-PSYSPTSPSYGPTSPSYNPQSAKYS 1735
Query: 251 ------------------SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP Y
Sbjct: 1736 PSIAYSPSNARLSPASPYSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDY 1795
Query: 377 SPTSPSYSPTSP 412
SP S YSPT P
Sbjct: 1796 SP-SAGYSPTLP 1806
Score = 103 bits (258), Expect = 5e-21
Identities = 64/125 (51%), Positives = 80/125 (64%), Gaps = 6/125 (4%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS---SPG--YS 211
+PG SP S + SPSY P SP+ + Q + Y +A+SP++ SP YS
Sbjct: 1703 SPGYSPTSPS---YSPTSPSY--GPT---SPSYNPQSAKYSPSIAYSPSNARLSPASPYS 1754
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
P+SP YSP+SP YSPTSP YSP+SP YSP+SP S SP YSPS+ GYSPT P YSP+S
Sbjct: 1755 PTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPTLPGYSPSST 1813
Query: 392 -SYSP 403
Y+P
Sbjct: 1814 GQYTP 1818
[8][TOP]
>UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99368_SOYBN
Length = 977
Score = 241 bits (615), Expect = 2e-62
Identities = 115/137 (83%), Positives = 124/137 (90%), Gaps = 1/137 (0%)
Frame = +2
Query: 5 LQLPSYMDGLDFGMTPGRSPISGTPYHEG-MMSPSYMLSPNLRLSPTNDAQFSPYVGGMA 181
LQLPSY DGLDFG+ G TPYHEG MMSPSY+LSPNLRLSP++DAQFSPYVGGMA
Sbjct: 668 LQLPSYTDGLDFGIMSG-----ATPYHEGTMMSPSYLLSPNLRLSPSSDAQFSPYVGGMA 722
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
FSP+SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSP YSP+SP YSP+SP YSP
Sbjct: 723 FSPSSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 782
Query: 362 TSPAYSPTSPSYSPTSP 412
TSP+YSPTSP+YSPTSP
Sbjct: 783 TSPSYSPTSPAYSPTSP 799
Score = 127 bits (319), Expect = 4e-28
Identities = 72/125 (57%), Positives = 82/125 (65%), Gaps = 20/125 (16%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SP+Y S + SPT+ + +SP A+SPTS P YS +SP YSP+SP YSPTSP YSP
Sbjct: 798 SPAYS-STSPAYSPTSPS-YSPT--SPAYSPTS-PSYSLTSPSYSPTSPSYSPTSPSYSP 852
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGY--------------------SPTSPAYSPTSPSY 397
TSP YSPTSP YSPTSP+YSP+SP Y SPTSP YSPTSPSY
Sbjct: 853 TSPAYSPTSPSYSPTSPSYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPTSPNYSPTSPSY 912
Query: 398 SPTSP 412
SPTSP
Sbjct: 913 SPTSP 917
Score = 120 bits (302), Expect = 4e-26
Identities = 71/126 (56%), Positives = 81/126 (64%), Gaps = 21/126 (16%)
Frame = +2
Query: 98 SPSYML-SPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY- 271
SPSY L SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y
Sbjct: 826 SPSYSLTSPSY--SPTSPS-YSPT--SPSYSPTS-PAYSPTSPSYSPTSPSYSPTSPSYN 879
Query: 272 -------------------SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
SPTSP YSPTSP YSPTSP+YSPSSP YSP+SP S SP
Sbjct: 880 PQSAKYSPSLAYSPSSPRLSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYNSGVSPD 939
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 940 YSPTSP 945
Score = 115 bits (289), Expect = 1e-24
Identities = 72/142 (50%), Positives = 86/142 (60%), Gaps = 21/142 (14%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S + + SPSY SP+ SPT+ + +SP A+SPTS P YSP+SP
Sbjct: 819 SPAYSPTSPS---YSLTSPSYSPTSPSY--SPTSPS-YSPT--SPAYSPTS-PSYSPTSP 869
Query: 224 GYSPSSPGY--------------------SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPS 343
YSP+SP Y SPTSP YSPTSP YSPTSP YSP+SPTYSPS
Sbjct: 870 SYSPTSPSYNPQSAKYSPSLAYSPSSPRLSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPS 929
Query: 344 SPGYSPTSPAYSPTSPSYSPTS 409
SP S SP YSPTSP +SP++
Sbjct: 930 SPYNSGVSPDYSPTSPQFSPSA 951
Score = 105 bits (262), Expect = 2e-21
Identities = 61/106 (57%), Positives = 74/106 (69%), Gaps = 7/106 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP SP+ + Q + Y +A+SP SSP SP+SP YSP+SP YSPTSP YSP
Sbjct: 868 SPSY--SPT---SPSYNPQSAKYSPSLAYSP-SSPRLSPTSPNYSPTSPSYSPTSPSYSP 921
Query: 278 TSPGYSPTSP---G----YSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
+SP YSP+SP G YSPTSP +SPS+ GYSP+ P YSP+S S
Sbjct: 922 SSPTYSPSSPYNSGVSPDYSPTSPQFSPSA-GYSPSQPGYSPSSTS 966
[9][TOP]
>UniRef100_B9FZ51 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FZ51_ORYSJ
Length = 1526
Score = 241 bits (615), Expect = 2e-62
Identities = 115/143 (80%), Positives = 123/143 (86%), Gaps = 7/143 (4%)
Frame = +2
Query: 5 LQLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAF 184
LQLPSY++GLDFGMTP RSPISGTPYHEGMMSPSY+LSPN+R SP DAQFSPYVGGMAF
Sbjct: 1147 LQLPSYVEGLDFGMTPARSPISGTPYHEGMMSPSYLLSPNIRASPITDAQFSPYVGGMAF 1206
Query: 185 SPTSSPGYSPSS-PGYSPSS------PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPS 343
SP SPGY+PSS GYSPSS PGYSPTSP YSP SP YSPTSP Y+P SPTYSP+
Sbjct: 1207 SPVPSPGYTPSSGGGYSPSSPVYSPGPGYSPTSPSYSPASPSYSPTSPSYTPGSPTYSPT 1266
Query: 344 SPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1267 SPSYSPTSPSYSPTSPSYSPTSP 1289
Score = 146 bits (369), Expect = 6e-34
Identities = 79/123 (64%), Positives = 90/123 (73%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
TPG S T SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1257 TPGSPTYSPTSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1310
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1311 SYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1370
Query: 404 TSP 412
TSP
Sbjct: 1371 TSP 1373
Score = 145 bits (367), Expect = 1e-33
Identities = 77/112 (68%), Positives = 86/112 (76%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRL-SPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SP + SPT+ A +SP A+SPTS SP YSP+SP YSP+SP YSP
Sbjct: 1309 SPSY--SPTSPVYSPTSPA-YSPT--SPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1363
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP YSPTSP YSP+SPGYSPTSP+YSPTSP+YSPTSP
Sbjct: 1364 TSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPNYSPTSP 1415
Score = 131 bits (330), Expect = 2e-29
Identities = 66/103 (64%), Positives = 79/103 (76%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YSP
Sbjct: 1337 SPSY--------SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYSP 1384
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
TSP YSPTSPGYSPTSP+YSP+SP YSPTSP+Y+P+S YSP+
Sbjct: 1385 TSPAYSPTSPGYSPTSPSYSPTSPNYSPTSPSYNPSSAKYSPS 1427
Score = 118 bits (296), Expect = 2e-25
Identities = 72/138 (52%), Positives = 83/138 (60%), Gaps = 33/138 (23%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SPGYSP+SP YSPTSP YS
Sbjct: 1358 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PAYSPTSPGYSPTSPSYSPTSPNYS 1411
Query: 275 PTSPGYSP-----------------------TSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
PTSP Y+P TSP YSPTSPTYSP+SP YS SP+YSPT
Sbjct: 1412 PTSPSYNPSSAKYSPSHAYSPSSPRLSPYSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPT 1471
Query: 386 ---------SPSYSPTSP 412
SP YSPTSP
Sbjct: 1472 SPYTTSGGPSPDYSPTSP 1489
Score = 112 bits (280), Expect = 1e-23
Identities = 70/136 (51%), Positives = 81/136 (59%), Gaps = 33/136 (24%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP A+SPTS PGYSP+SP YSP+SP YSPTSP Y+
Sbjct: 1365 SPSYSPTSPSY--SPTSPS-YSPT--SPAYSPTS-PGYSPTSPSYSPTSPNYSPTSPSYN 1418
Query: 275 P-----------------------TSPGYSPTSPGYSPTSPTYSPSSPGYSPT------- 364
P TSP YSPTSP YSPTSP+YS SP YSPT
Sbjct: 1419 PSSAKYSPSHAYSPSSPRLSPYSQTSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSG 1478
Query: 365 --SPAYSPTSPSYSPT 406
SP YSPTSP+YSP+
Sbjct: 1479 GPSPDYSPTSPNYSPS 1494
Score = 91.7 bits (226), Expect = 2e-17
Identities = 62/139 (44%), Positives = 75/139 (53%), Gaps = 20/139 (14%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLR-LSPTNDAQFSPYVGGMAFSPTS-------- 196
+PG SP S PSY SPN SP+ + + Y A+SP+S
Sbjct: 1393 SPGYSPTS----------PSYSPTSPNYSPTSPSYNPSSAKYSPSHAYSPSSPRLSPYSQ 1442
Query: 197 -SPGYSPSSPGYSPSSPGYSPTSPGYSPTSP---------GYSPTSPGYSPTSPTYSPSS 346
SP YSP+SP YSP+SP YS SP YSPTSP YSPTSP YSP S +YSP++
Sbjct: 1443 TSPNYSPTSPTYSPTSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTSPNYSP-SGSYSPTA 1501
Query: 347 PGYSPTSPAYSPTSPSYSP 403
PGYSP+S T +SP
Sbjct: 1502 PGYSPSS-----TGQQFSP 1515
[10][TOP]
>UniRef100_A9TK89 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TK89_PHYPA
Length = 1646
Score = 241 bits (614), Expect = 2e-62
Identities = 113/136 (83%), Positives = 125/136 (91%)
Frame = +2
Query: 5 LQLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAF 184
LQLPS+ +G D+GMTP RSP+ GTP++EGMMSPSY+LSP+LR SP ++AQFSPYVG M F
Sbjct: 1463 LQLPSF-EGTDYGMTPSRSPMIGTPHNEGMMSPSYLLSPSLRASPLSEAQFSPYVGSMPF 1521
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SP SSPGYSPSSPGYSP SPGYSPTSPGYSPTSPGYSPTSPGYSPTSP+YSP+SPGYSPT
Sbjct: 1522 SP-SSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTSPGYSPT 1580
Query: 365 SPAYSPTSPSYSPTSP 412
SP YSPTSPSYSPTSP
Sbjct: 1581 SPGYSPTSPSYSPTSP 1596
[11][TOP]
>UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U396_PHYPA
Length = 1742
Score = 234 bits (597), Expect = 2e-60
Identities = 109/142 (76%), Positives = 126/142 (88%), Gaps = 6/142 (4%)
Frame = +2
Query: 5 LQLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAF 184
LQLPS+ + D+GMTP R+P+ GTP+++GMMSPSY+LSP+LR SP +DAQFSPYVG M F
Sbjct: 1478 LQLPSF-EATDYGMTPSRTPMIGTPHNDGMMSPSYLLSPSLRASPLSDAQFSPYVGNMPF 1536
Query: 185 SPTS------SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSS 346
SP+S SPGYSP SPGYSP+SPGYSPTSPGYSPTSPGYSPTSPGYSPTSP+YSP+S
Sbjct: 1537 SPSSPGYSPSSPGYSPLSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPSYSPTS 1596
Query: 347 PGYSPTSPAYSPTSPSYSPTSP 412
PGYSPTSP+YSPTSPSY+PTSP
Sbjct: 1597 PGYSPTSPSYSPTSPSYAPTSP 1618
Score = 145 bits (367), Expect = 1e-33
Identities = 81/133 (60%), Positives = 94/133 (70%), Gaps = 11/133 (8%)
Frame = +2
Query: 47 TPGRSPISG----TPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS----- 196
+PG SP S T SPSY SP+ SPT+ + +SP ++SPTS
Sbjct: 1596 SPGYSPTSPSYSPTSPSYAPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTSPSYSP 1650
Query: 197 -SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
SP YSP+SP YSP+SP Y+PTSP YSPTSP YSPTSPGYSPTSP+YSPSSP YSPTSP+
Sbjct: 1651 TSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYSPSSPSYSPTSPS 1710
Query: 374 YSPTSPSYSPTSP 412
YSPTSP+YSPTSP
Sbjct: 1711 YSPTSPAYSPTSP 1723
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP A+SPTS P Y+P+SP YSP+SP YSPTSPGYS
Sbjct: 1638 SPSYSPTSPSY--SPTSPS-YSPT--SPAYSPTS-PSYAPTSPAYSPTSPSYSPTSPGYS 1691
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSP+SP YSPTSP+YSP+SP YSPTSP YSP+SPSYSPTSP
Sbjct: 1692 PTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPSSPSYSPTSP 1737
Score = 140 bits (354), Expect = 3e-32
Identities = 72/106 (67%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1631 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PAYSPTSPSYAPTSPAYSPTSPSYS 1684
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSPGYSPTSP YSP+SP+YSP+SP YSPTSPAYSPTSP YSP+SP
Sbjct: 1685 PTSPGYSPTSPSYSPSSPSYSPTSPSYSPTSPAYSPTSPRYSPSSP 1730
Score = 134 bits (336), Expect = 4e-30
Identities = 74/131 (56%), Positives = 86/131 (65%), Gaps = 9/131 (6%)
Frame = +2
Query: 47 TPGRSPISGT--PYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
+PG SP S + P G S SP +SP ++SPTS P YSP+S
Sbjct: 1582 SPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYAPTSPSYSPT--SPSYSPTS-PSYSPTS 1638
Query: 221 P-------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
P YSP+SP YSPTSP YSPTSP Y+PTSP YSPTSP+YSP+SPGYSPTSP+YS
Sbjct: 1639 PSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYAPTSPAYSPTSPSYSPTSPGYSPTSPSYS 1698
Query: 380 PTSPSYSPTSP 412
P+SPSYSPTSP
Sbjct: 1699 PSSPSYSPTSP 1709
Score = 119 bits (299), Expect = 8e-26
Identities = 62/94 (65%), Positives = 69/94 (73%), Gaps = 1/94 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + + A SP A+SPTS P YSP+SPGYSP+SP YSP+SP YS
Sbjct: 1652 SPSYSPTSPAYSPTSPSYAPTSP-----AYSPTS-PSYSPTSPGYSPTSPSYSPSSPSYS 1705
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
PTSP YSPTSP YSPTSP YSPSSP YSPTSP+Y
Sbjct: 1706 PTSPSYSPTSPAYSPTSPRYSPSSPSYSPTSPSY 1739
[12][TOP]
>UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5YGY9_SORBI
Length = 1857
Score = 229 bits (585), Expect = 6e-59
Identities = 113/158 (71%), Positives = 121/158 (76%), Gaps = 22/158 (13%)
Frame = +2
Query: 5 LQLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTN-DAQFSPYVGGMA 181
LQLPSY++GLDFGMTP RSPISGTPYHEGMMSPSY+LSPN+R SP N DA FSPYVG MA
Sbjct: 1475 LQLPSYVEGLDFGMTPARSPISGTPYHEGMMSPSYLLSPNIRASPINTDASFSPYVGHMA 1534
Query: 182 FSPTSSPG---------------------YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSP 298
FSP SPG YSP SP YSP+SP YSPTSP Y+P SP YSP
Sbjct: 1535 FSPFPSPGGYSPSSGGYSPSSPVFTPEKGYSPLSPSYSPASPSYSPTSPSYTPGSPTYSP 1594
Query: 299 TSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSPTYSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1595 TSPNYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSP 1632
Score = 147 bits (370), Expect = 5e-34
Identities = 78/112 (69%), Positives = 86/112 (76%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRL-SPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SP + SPT+ A +SP A+SPTS SP YSP+SP YSP+SP YSP
Sbjct: 1645 SPSY--SPTSPVYSPTSPA-YSPT--SPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1699
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP YSPTSP YSP+SPGYSPTSP+YSPTSPSYSPTSP
Sbjct: 1700 TSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPGYSPTSPSYSPTSPSYSPTSP 1751
Score = 146 bits (368), Expect = 8e-34
Identities = 78/123 (63%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
TPG S T + SP+Y SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1586 TPGSPTYSPTSPNYSPTSPTYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1639
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1640 SYSPTSPSYSPTSPVYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1699
Query: 404 TSP 412
TSP
Sbjct: 1700 TSP 1702
Score = 131 bits (330), Expect = 2e-29
Identities = 66/103 (64%), Positives = 79/103 (76%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YSP
Sbjct: 1673 SPSY--------SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYSP 1720
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
TSP YSPTSPGYSPTSP+YSP+SP YSPTSP+Y+P+S YSP+
Sbjct: 1721 TSPAYSPTSPGYSPTSPSYSPTSPSYSPTSPSYNPSSAKYSPS 1763
Score = 118 bits (296), Expect = 2e-25
Identities = 72/138 (52%), Positives = 83/138 (60%), Gaps = 33/138 (23%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SPGYSP+SP YSPTSP YS
Sbjct: 1694 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PAYSPTSPGYSPTSPSYSPTSPSYS 1747
Query: 275 PTSPGYSP-----------------------TSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
PTSP Y+P TSP YSPTSPTYSP+SP YS SP+YSPT
Sbjct: 1748 PTSPSYNPSSAKYSPSHAYSPSSPRMTPYSQTSPSYSPTSPTYSPTSPSYSQPSPSYSPT 1807
Query: 386 ---------SPSYSPTSP 412
SP YSPTSP
Sbjct: 1808 SPFNTSGGPSPDYSPTSP 1825
Score = 112 bits (280), Expect = 1e-23
Identities = 70/136 (51%), Positives = 81/136 (59%), Gaps = 33/136 (24%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP A+SPTS PGYSP+SP YSP+SP YSPTSP Y+
Sbjct: 1701 SPSYSPTSPSY--SPTSPS-YSPT--SPAYSPTS-PGYSPTSPSYSPTSPSYSPTSPSYN 1754
Query: 275 P-----------------------TSPGYSPTSPGYSPTSPTYSPSSPGYSPT------- 364
P TSP YSPTSP YSPTSP+YS SP YSPT
Sbjct: 1755 PSSAKYSPSHAYSPSSPRMTPYSQTSPSYSPTSPTYSPTSPSYSQPSPSYSPTSPFNTSG 1814
Query: 365 --SPAYSPTSPSYSPT 406
SP YSPTSP+YSP+
Sbjct: 1815 GPSPDYSPTSPNYSPS 1830
Score = 98.2 bits (243), Expect = 3e-19
Identities = 61/123 (49%), Positives = 71/123 (57%), Gaps = 9/123 (7%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+PG SP S + SPSY SP + A++SP SP +P YS +SP
Sbjct: 1729 SPGYSPTSPS---YSPTSPSY--SPTSPSYNPSSAKYSPSHAYSPSSPRMTP-YSQTSPS 1782
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSP---------GYSPTSPTYSPSSPGYSPTSPAYS 379
YSP+SP YSPTSP YS SP YSPTSP YSPTSP YSPS YSPT+P YS
Sbjct: 1783 YSPTSPTYSPTSPSYSQPSPSYSPTSPFNTSGGPSPDYSPTSPNYSPSG-SYSPTAPGYS 1841
Query: 380 PTS 388
P+S
Sbjct: 1842 PSS 1844
Score = 57.0 bits (136), Expect = 6e-07
Identities = 39/81 (48%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Frame = +2
Query: 74 TPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS--------SPGYSPSSPG 226
TPY + SPSY SP SPT+ + P ++SPTS SP YSP+SP
Sbjct: 1774 TPYSQ--TSPSYSPTSPTY--SPTSPSYSQP---SPSYSPTSPFNTSGGPSPDYSPTSPN 1826
Query: 227 YSPSSPGYSPTSPGYSPTSPG 289
YSPS YSPT+PGYSP+S G
Sbjct: 1827 YSPSG-SYSPTAPGYSPSSTG 1846
[13][TOP]
>UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351
Length = 2085
Score = 189 bits (481), Expect = 6e-47
Identities = 107/168 (63%), Positives = 117/168 (69%), Gaps = 32/168 (19%)
Frame = +2
Query: 5 LQLPSYMDGLDFGM-TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPT-NDAQFSPYVGGM 178
LQLPSY++GLDFGM T SPISGTPYH+GMMSPSY+LSP++R SPT DAQFSPYVGGM
Sbjct: 1477 LQLPSYVEGLDFGMMTSACSPISGTPYHQGMMSPSYLLSPDIRASPTAADAQFSPYVGGM 1536
Query: 179 AFSPTSSPG-YSPSSPG---------------------YSPSSPGYSP--------TSPG 268
AFSP SSPG Y+PSS G Y+P SP YSP TSP
Sbjct: 1537 AFSPVSSPGNYTPSSGGGYSPSPPVCTPGPGSFTSSSPYNPVSPFYSPASPLSCPLTSPS 1596
Query: 269 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
Y PTS +SPTSP YS TSP YSPSSP YSPTS +YSPTSP YSPTSP
Sbjct: 1597 YVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSP 1644
Score = 144 bits (363), Expect = 3e-33
Identities = 74/122 (60%), Positives = 89/122 (72%), Gaps = 1/122 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P +P S + Y SPSY SP+ SPT+ + +SP +SPTS P YSP+SP
Sbjct: 1657 SPSYNPTSPS-YSYSPTSPSYSPTSPSYSYSPTSPS-YSPTSPSYNYSPTS-PSYSPTSP 1713
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTS YSPTSP YSP+SPGYSPTSP+YSP+SPSY+P
Sbjct: 1714 SYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNP 1773
Query: 404 TS 409
+S
Sbjct: 1774 SS 1775
Score = 140 bits (354), Expect = 3e-32
Identities = 72/114 (63%), Positives = 82/114 (71%), Gaps = 9/114 (7%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS--------SPGYSPSSPGYSPSSPGY 250
SPSY SP+ SPT+ + +SP ++SPTS S YSP+SP YSP+SP Y
Sbjct: 1657 SPSYNPTSPSYSYSPTSPS-YSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSY 1715
Query: 251 SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSP YSPTSP YSPTSP YSPTS YSP+SP YSPTSP YSPTSPSYSP+SP
Sbjct: 1716 SPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSP 1769
Score = 132 bits (333), Expect = 9e-30
Identities = 75/137 (54%), Positives = 90/137 (65%), Gaps = 15/137 (10%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S + Y SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1673 SPSYSPTSPS-YSYSPTSPSYSPTSPSYNYSPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1727
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP------- 382
YSP+SP YSPTS YSPTSP YSPTSPGYSPTSP+YSPSSP Y+P+S Y+P
Sbjct: 1728 SYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPS 1787
Query: 383 -------TSPSYSPTSP 412
TSP+YSPTSP
Sbjct: 1788 SPNYYSSTSPTYSPTSP 1804
Score = 121 bits (303), Expect = 3e-26
Identities = 75/138 (54%), Positives = 89/138 (64%), Gaps = 15/138 (10%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLS--PNLRLSPTNDAQFSPYV-GGMAFSPTS------ 196
++P SP S P + SPSY+ + P+ SP A Y +SPTS
Sbjct: 1578 VSPFYSPAS--PLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPT 1635
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSP--GYSPTSPGYSPTSP--TYSPSSPGYSPT 364
SP YSP+SP Y+P+S YSPTSP Y+PTSP YSPTSP YSPTSP +YSP+SP YSPT
Sbjct: 1636 SPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPT 1695
Query: 365 SPA--YSPTSPSYSPTSP 412
SP+ YSPTSPSYSPTSP
Sbjct: 1696 SPSYNYSPTSPSYSPTSP 1713
Score = 114 bits (285), Expect = 3e-24
Identities = 68/126 (53%), Positives = 83/126 (65%), Gaps = 4/126 (3%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVG--GMAFSPTSSPGYSPS 217
+P SP S + Y+ SPSY SP+ + + + SP ++SPTSS YSP+
Sbjct: 1689 SPSYSPTSPS-YNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSS-AYSPT 1746
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTSPAYSPTSPS 394
SP YSP+SPGYSPTSP YSP+SP Y+P+S Y+P S YSPSSP YS TSP YSPTSPS
Sbjct: 1747 SPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTP-SHAYSPSSPNYYSSTSPTYSPTSPS 1805
Query: 395 YSPTSP 412
YS SP
Sbjct: 1806 YSQPSP 1811
Score = 108 bits (270), Expect = 2e-22
Identities = 69/134 (51%), Positives = 85/134 (63%), Gaps = 3/134 (2%)
Frame = +2
Query: 14 PSYMD-GLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFS 187
PSY + +P S T SPSY SP+ SPT+ + +SP A+S
Sbjct: 1690 PSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SSAYS 1744
Query: 188 PTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT-YSPSSPGYSPT 364
PTS P YSP+SPGYSP+SP YSP+SP Y+P+S Y+P S YSP+SP YS +SP YSPT
Sbjct: 1745 PTS-PAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTP-SHAYSPSSPNYYSSTSPTYSPT 1802
Query: 365 SPAYSPTSPSYSPT 406
SP+YS SPSYSPT
Sbjct: 1803 SPSYSQPSPSYSPT 1816
[14][TOP]
>UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q5WMZ9_ORYSJ
Length = 1741
Score = 189 bits (481), Expect = 6e-47
Identities = 107/168 (63%), Positives = 117/168 (69%), Gaps = 32/168 (19%)
Frame = +2
Query: 5 LQLPSYMDGLDFGM-TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPT-NDAQFSPYVGGM 178
LQLPSY++GLDFGM T SPISGTPYH+GMMSPSY+LSP++R SPT DAQFSPYVGGM
Sbjct: 1424 LQLPSYVEGLDFGMMTSACSPISGTPYHQGMMSPSYLLSPDIRASPTAADAQFSPYVGGM 1483
Query: 179 AFSPTSSPG-YSPSSPG---------------------YSPSSPGYSP--------TSPG 268
AFSP SSPG Y+PSS G Y+P SP YSP TSP
Sbjct: 1484 AFSPVSSPGNYTPSSGGGYSPSPPVCTPGPGSFTSSSPYNPVSPFYSPASPLSCPLTSPS 1543
Query: 269 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
Y PTS +SPTSP YS TSP YSPSSP YSPTS +YSPTSP YSPTSP
Sbjct: 1544 YVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSP 1591
Score = 144 bits (363), Expect = 3e-33
Identities = 74/122 (60%), Positives = 89/122 (72%), Gaps = 1/122 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P +P S + Y SPSY SP+ SPT+ + +SP +SPTS P YSP+SP
Sbjct: 1604 SPSYNPTSPS-YSYSPTSPSYSPTSPSYSYSPTSPS-YSPTSPSYNYSPTS-PSYSPTSP 1660
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTS YSPTSP YSP+SPGYSPTSP+YSP+SPSY+P
Sbjct: 1661 SYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNP 1720
Query: 404 TS 409
+S
Sbjct: 1721 SS 1722
Score = 140 bits (354), Expect = 3e-32
Identities = 72/114 (63%), Positives = 82/114 (71%), Gaps = 9/114 (7%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS--------SPGYSPSSPGYSPSSPGY 250
SPSY SP+ SPT+ + +SP ++SPTS S YSP+SP YSP+SP Y
Sbjct: 1604 SPSYNPTSPSYSYSPTSPS-YSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSY 1662
Query: 251 SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSP YSPTSP YSPTSP YSPTS YSP+SP YSPTSP YSPTSPSYSP+SP
Sbjct: 1663 SPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSP 1716
Score = 130 bits (328), Expect = 3e-29
Identities = 72/123 (58%), Positives = 88/123 (71%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S + Y SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1620 SPSYSPTSPS-YSYSPTSPSYSPTSPSYNYSPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1674
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTS YSPTSP YSPTSPGYSPTSP+YSPSSP Y+P+S Y+P S +YSP
Sbjct: 1675 SYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTP-SHAYSP 1733
Query: 404 TSP 412
+SP
Sbjct: 1734 SSP 1736
Score = 121 bits (303), Expect = 3e-26
Identities = 75/138 (54%), Positives = 89/138 (64%), Gaps = 15/138 (10%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLS--PNLRLSPTNDAQFSPYV-GGMAFSPTS------ 196
++P SP S P + SPSY+ + P+ SP A Y +SPTS
Sbjct: 1525 VSPFYSPAS--PLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPT 1582
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSP--GYSPTSPGYSPTSP--TYSPSSPGYSPT 364
SP YSP+SP Y+P+S YSPTSP Y+PTSP YSPTSP YSPTSP +YSP+SP YSPT
Sbjct: 1583 SPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPT 1642
Query: 365 SPA--YSPTSPSYSPTSP 412
SP+ YSPTSPSYSPTSP
Sbjct: 1643 SPSYNYSPTSPSYSPTSP 1660
[15][TOP]
>UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DKN9_ORYSJ
Length = 1834
Score = 189 bits (481), Expect = 6e-47
Identities = 107/168 (63%), Positives = 117/168 (69%), Gaps = 32/168 (19%)
Frame = +2
Query: 5 LQLPSYMDGLDFGM-TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPT-NDAQFSPYVGGM 178
LQLPSY++GLDFGM T SPISGTPYH+GMMSPSY+LSP++R SPT DAQFSPYVGGM
Sbjct: 1477 LQLPSYVEGLDFGMMTSACSPISGTPYHQGMMSPSYLLSPDIRASPTAADAQFSPYVGGM 1536
Query: 179 AFSPTSSPG-YSPSSPG---------------------YSPSSPGYSP--------TSPG 268
AFSP SSPG Y+PSS G Y+P SP YSP TSP
Sbjct: 1537 AFSPVSSPGNYTPSSGGGYSPSPPVCTPGPGSFTSSSPYNPVSPFYSPASPLSCPLTSPS 1596
Query: 269 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
Y PTS +SPTSP YS TSP YSPSSP YSPTS +YSPTSP YSPTSP
Sbjct: 1597 YVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSP 1644
Score = 144 bits (363), Expect = 3e-33
Identities = 74/122 (60%), Positives = 89/122 (72%), Gaps = 1/122 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P +P S + Y SPSY SP+ SPT+ + +SP +SPTS P YSP+SP
Sbjct: 1657 SPSYNPTSPS-YSYSPTSPSYSPTSPSYSYSPTSPS-YSPTSPSYNYSPTS-PSYSPTSP 1713
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTS YSPTSP YSP+SPGYSPTSP+YSP+SPSY+P
Sbjct: 1714 SYSPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNP 1773
Query: 404 TS 409
+S
Sbjct: 1774 SS 1775
Score = 140 bits (354), Expect = 3e-32
Identities = 72/114 (63%), Positives = 82/114 (71%), Gaps = 9/114 (7%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS--------SPGYSPSSPGYSPSSPGY 250
SPSY SP+ SPT+ + +SP ++SPTS S YSP+SP YSP+SP Y
Sbjct: 1657 SPSYNPTSPSYSYSPTSPS-YSPTSPSYSYSPTSPSYSPTSPSYNYSPTSPSYSPTSPSY 1715
Query: 251 SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSP YSPTSP YSPTSP YSPTS YSP+SP YSPTSP YSPTSPSYSP+SP
Sbjct: 1716 SPTSPSYSPTSPSYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSP 1769
Score = 132 bits (333), Expect = 9e-30
Identities = 75/137 (54%), Positives = 90/137 (65%), Gaps = 15/137 (10%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S + Y SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1673 SPSYSPTSPS-YSYSPTSPSYSPTSPSYNYSPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1727
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP------- 382
YSP+SP YSPTS YSPTSP YSPTSPGYSPTSP+YSPSSP Y+P+S Y+P
Sbjct: 1728 SYSPTSPSYSPTSSAYSPTSPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTPSHAYSPS 1787
Query: 383 -------TSPSYSPTSP 412
TSP+YSPTSP
Sbjct: 1788 SPNYYSSTSPTYSPTSP 1804
Score = 121 bits (303), Expect = 3e-26
Identities = 75/138 (54%), Positives = 89/138 (64%), Gaps = 15/138 (10%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLS--PNLRLSPTNDAQFSPYV-GGMAFSPTS------ 196
++P SP S P + SPSY+ + P+ SP A Y +SPTS
Sbjct: 1578 VSPFYSPAS--PLSCPLTSPSYVPTSLPHSPTSPIYSATSPIYSPSSPIYSPTSLSYSPT 1635
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSP--GYSPTSPGYSPTSP--TYSPSSPGYSPT 364
SP YSP+SP Y+P+S YSPTSP Y+PTSP YSPTSP YSPTSP +YSP+SP YSPT
Sbjct: 1636 SPVYSPTSPVYNPTSSAYSPTSPSYNPTSPSYSYSPTSPSYSPTSPSYSYSPTSPSYSPT 1695
Query: 365 SPA--YSPTSPSYSPTSP 412
SP+ YSPTSPSYSPTSP
Sbjct: 1696 SPSYNYSPTSPSYSPTSP 1713
Score = 114 bits (285), Expect = 3e-24
Identities = 68/126 (53%), Positives = 83/126 (65%), Gaps = 4/126 (3%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVG--GMAFSPTSSPGYSPS 217
+P SP S + Y+ SPSY SP+ + + + SP ++SPTSS YSP+
Sbjct: 1689 SPSYSPTSPS-YNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSS-AYSPT 1746
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTSPAYSPTSPS 394
SP YSP+SPGYSPTSP YSP+SP Y+P+S Y+P S YSPSSP YS TSP YSPTSPS
Sbjct: 1747 SPAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTP-SHAYSPSSPNYYSSTSPTYSPTSPS 1805
Query: 395 YSPTSP 412
YS SP
Sbjct: 1806 YSQPSP 1811
Score = 110 bits (274), Expect = 6e-23
Identities = 70/135 (51%), Positives = 86/135 (63%), Gaps = 3/135 (2%)
Frame = +2
Query: 14 PSYMD-GLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFS 187
PSY + +P S T SPSY SP+ SPT+ + +SP A+S
Sbjct: 1690 PSYSPTSPSYNYSPTSPSYSPTSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SSAYS 1744
Query: 188 PTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT-YSPSSPGYSPT 364
PTS P YSP+SPGYSP+SP YSP+SP Y+P+S Y+P S YSP+SP YS +SP YSPT
Sbjct: 1745 PTS-PAYSPTSPGYSPTSPSYSPSSPSYNPSSVKYTP-SHAYSPSSPNYYSSTSPTYSPT 1802
Query: 365 SPAYSPTSPSYSPTS 409
SP+YS SPSYSPTS
Sbjct: 1803 SPSYSQPSPSYSPTS 1817
[16][TOP]
>UniRef100_C1EA31 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
RepID=C1EA31_9CHLO
Length = 1720
Score = 172 bits (435), Expect = 1e-41
Identities = 89/139 (64%), Positives = 102/139 (73%), Gaps = 11/139 (7%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDA-QFSP-------YVGG--- 175
GL G+TPGR TP EG MSPS++LSP +SP +D+ +FSP + GG
Sbjct: 1468 GLGVGVTPGRGI---TPGREGAMSPSFLLSPTAHMSPFDDSMRFSPQGTDYGSHAGGGQS 1524
Query: 176 MAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY 355
+SPTS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP Y
Sbjct: 1525 PGYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 1583
Query: 356 SPTSPAYSPTSPSYSPTSP 412
SPTSPAYSPTSP+YSPTSP
Sbjct: 1584 SPTSPAYSPTSPAYSPTSP 1602
Score = 143 bits (361), Expect = 5e-33
Identities = 75/106 (70%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1566 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 1619
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 1620 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1665
Score = 143 bits (360), Expect = 7e-33
Identities = 75/106 (70%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1573 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 1626
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSP YSPTSP
Sbjct: 1627 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSP 1672
Score = 141 bits (355), Expect = 3e-32
Identities = 74/106 (69%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1580 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 1633
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1634 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSPQYSPTSP 1679
Score = 140 bits (353), Expect = 4e-32
Identities = 74/106 (69%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1587 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 1640
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1641 PTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSPQYSPTSPQYSPTSP 1686
Score = 137 bits (345), Expect = 4e-31
Identities = 73/105 (69%), Positives = 80/105 (76%), Gaps = 1/105 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1594 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 1647
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTS
Sbjct: 1648 PTSPAYSPTSPAYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTS 1692
Score = 114 bits (286), Expect = 3e-24
Identities = 66/106 (62%), Positives = 76/106 (71%), Gaps = 2/106 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1615 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPQYS 1668
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPT-SPAYSPTSPSYSPTS 409
PTSP YSPTSP YSPTSP YSP+S G S +P SPTSP YSP++
Sbjct: 1669 PTSPQYSPTSPQYSPTSPQYSPTSLGLSDADAPTRSPTSPQYSPST 1714
Score = 98.6 bits (244), Expect = 2e-19
Identities = 60/101 (59%), Positives = 69/101 (68%), Gaps = 9/101 (8%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1622 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPQYSPTSPQYS 1675
Query: 275 PTSPGYSPTSPGYSPTS--------PTYSPSSPGYSPTSPA 373
PTSP YSPTSP YSPTS PT SP+SP YSP++ A
Sbjct: 1676 PTSPQYSPTSPQYSPTSLGLSDADAPTRSPTSPQYSPSTEA 1716
[17][TOP]
>UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IRZ2_CHLRE
Length = 1789
Score = 169 bits (427), Expect = 1e-40
Identities = 88/143 (61%), Positives = 100/143 (69%), Gaps = 7/143 (4%)
Frame = +2
Query: 5 LQLPSYMDGLDFGMTPGRSPISGTPYHE-GMMSPSYMLSP------NLRLSPTNDAQFSP 163
+Q+ + G D+ MTPGR S +P G MSPS++LSP SP + FSP
Sbjct: 1477 VQIGNLAFGEDYTMTPGRMTPSRSPARTPGPMSPSHLLSPMHSPFVGSGFSPMHPGAFSP 1536
Query: 164 YVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPS 343
GG P S PGYSP+SPGYSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+
Sbjct: 1537 AHGGGVGGPMS-PGYSPTSPGYSPTSPRYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1595
Query: 344 SPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 1596 SPAYSPTSPAYSPTSPAYSPTSP 1618
Score = 125 bits (315), Expect = 1e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 5/109 (4%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1596 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 1649
Query: 275 PTSPGYSP----TSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
PTSP YSP TSP YSPTSP+ SP+SP YSPTSP YSPTSP+YSP++
Sbjct: 1650 PTSPAYSPAYSPTSPQYSPTSPSMSPTSPRYSPTSPNYSPTSPNYSPST 1698
[18][TOP]
>UniRef100_A4S3M0 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S3M0_OSTLU
Length = 1646
Score = 167 bits (424), Expect = 3e-40
Identities = 88/135 (65%), Positives = 96/135 (71%), Gaps = 12/135 (8%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQ-FSPYVGGMAFSPTSSPG----- 205
MTPGR GTP G SPS++LSP SP + + FSPY GMAFSP SPG
Sbjct: 1468 MTPGRD---GTPGW-GSKSPSFLLSPGGHQSPFDTSMAFSPYSDGMAFSPGMSPGGFGGY 1523
Query: 206 ------YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTS 367
YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTS
Sbjct: 1524 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTS 1583
Query: 368 PAYSPTSPSYSPTSP 412
PAYSPTSP+YSPTSP
Sbjct: 1584 PAYSPTSPAYSPTSP 1598
Score = 97.8 bits (242), Expect = 3e-19
Identities = 54/82 (65%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1562 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 1615
Query: 275 PTSPGYSPTSPGYSPTSPTYSP 340
PTSP YSPTSP YSPTSP YSP
Sbjct: 1616 PTSPAYSPTSPAYSPTSPAYSP 1637
[19][TOP]
>UniRef100_UPI00005A0B1F PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 10 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1F
Length = 1840
Score = 160 bits (405), Expect = 4e-38
Identities = 83/134 (61%), Positives = 94/134 (70%), Gaps = 5/134 (3%)
Frame = +2
Query: 26 DGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGM-----AFSP 190
DG G +P SP G+P G SP Y+ SP SPT+ A GG ++SP
Sbjct: 1492 DGFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGELYSPTSPAYEPRSPGGYTPQSPSYSP 1550
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1551 TS-PSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1609
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1610 SYSPTSPSYSPTSP 1623
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1531 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1585
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1586 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1644
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1645 SYSPTSPSYSPTSP 1658
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1608 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1661
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1662 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1707
Score = 136 bits (343), Expect = 6e-31
Identities = 71/106 (66%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSPS P Y+PTSP YS
Sbjct: 1643 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPSRPNYTPTSPSYS 1696
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP+YSPSSP Y+PTSP YSPTSP YSPTSP
Sbjct: 1697 PTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1742
Score = 135 bits (341), Expect = 1e-30
Identities = 69/106 (65%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1615 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1668
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP Y+PTSP
Sbjct: 1669 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSP 1714
Score = 133 bits (334), Expect = 7e-30
Identities = 72/121 (59%), Positives = 81/121 (66%), Gaps = 16/121 (13%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVG--GMAFSPTS-------------SPGYSPSSPGY 229
SPSY SPN S N SP ++SPTS SP Y+P+SP Y
Sbjct: 1671 SPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY 1730
Query: 230 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
SP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTS
Sbjct: 1731 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1790
Query: 410 P 412
P
Sbjct: 1791 P 1791
Score = 132 bits (333), Expect = 9e-30
Identities = 72/123 (58%), Positives = 86/123 (69%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P R + T SPSY SP + +PT+ + +SP ++PTS P YSP+SP
Sbjct: 1682 SPSRPNYTPTSPSYSPTSPSYSPTSP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSP 1735
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPT+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSP
Sbjct: 1736 KYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSP 1795
Query: 404 TSP 412
TSP
Sbjct: 1796 TSP 1798
Score = 129 bits (323), Expect = 1e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 1713 SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 1767
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1768 TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1815
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1727 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 1780
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1781 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1829
Score = 119 bits (297), Expect = 1e-25
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ +SP +SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1734 SPKYSPTSP--KYSPTSPT-YSPTTP--KYSPTS-PTYSPTSPVYTPTSPKYSPTSPTYS 1787
Query: 275 PTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1788 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1833
[20][TOP]
>UniRef100_UPI00019270E9 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 2 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270E9
Length = 2014
Score = 158 bits (399), Expect = 2e-37
Identities = 84/144 (58%), Positives = 98/144 (68%), Gaps = 11/144 (7%)
Frame = +2
Query: 14 PSYMDG----LDFGMTPGRSPISGTPYHE-------GMMSPSYMLSPNLRLSPTNDAQFS 160
P Y DG L GMTPG + S + + + G SP++ ++ N F+
Sbjct: 1522 PGYGDGWSPALGSGMTPGAASFSPSAHSDASGFSPAGGFSPAWSPQDSIPSYSPNSPAFN 1581
Query: 161 PYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 340
P A SP SSPGYSP+SP YSP+SPGYSPTSP YSPTSPGYSPTSP YSPTSP+YSP
Sbjct: 1582 PQ--SPAMSP-SSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSP 1638
Query: 341 SSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1639 TSPSYSPTSPSYSPTSPSYSPTSP 1662
Score = 145 bits (365), Expect = 2e-33
Identities = 79/123 (64%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG SP S + SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1619 SPGYSPTSPS---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1669
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1670 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSP 1729
Query: 404 TSP 412
TSP
Sbjct: 1730 TSP 1732
Score = 144 bits (363), Expect = 3e-33
Identities = 79/126 (62%), Positives = 90/126 (71%), Gaps = 4/126 (3%)
Frame = +2
Query: 47 TPGRSPISG--TPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
+PG SP S +P G SPSY SPT+ +SP ++SPTS P YSP
Sbjct: 1591 SPGYSPTSPLYSPTSPGYSPTSPSY--------SPTSPG-YSPT--SPSYSPTS-PSYSP 1638
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPS
Sbjct: 1639 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1698
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1699 YSPTSP 1704
Score = 142 bits (357), Expect = 2e-32
Identities = 75/106 (70%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + SPT+ ++SP +SPTS P YSPSSP YSPSSP YSPTSP YS
Sbjct: 1773 SPSYSPTSP--KYSPTSP-KYSPT--SPKYSPTS-PSYSPSSPSYSPSSPNYSPTSPTYS 1826
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP+YSPTSP
Sbjct: 1827 PTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSP 1872
Score = 139 bits (351), Expect = 7e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1654 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPIYS 1707
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSP 1753
Score = 139 bits (351), Expect = 7e-32
Identities = 73/111 (65%), Positives = 85/111 (76%), Gaps = 6/111 (5%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDA------QFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 259
SPSY S + + SPT+ A +SP ++SPTS P YSP+SP YSP+SP YSPT
Sbjct: 1745 SPSYSPS-SPQYSPTSPAYSPQSPSYSP--SSPSYSPTS-PKYSPTSPKYSPTSPKYSPT 1800
Query: 260 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSP+SP YSP+SP YSPTSPTYSP+SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 1801 SPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSP 1851
Score = 139 bits (351), Expect = 7e-32
Identities = 79/136 (58%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Frame = +2
Query: 8 QLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAF 184
Q PSY +P S T SP Y SP + SPT+ + +SP ++
Sbjct: 1765 QSPSY--------SPSSPSYSPTSPKYSPTSPKYSPTSP--KYSPTSPS-YSP--SSPSY 1811
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SP SSP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPT
Sbjct: 1812 SP-SSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPT 1870
Query: 365 SPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP
Sbjct: 1871 SPKYSPTSPKYSPTSP 1886
Score = 139 bits (349), Expect = 1e-31
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1675 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PIYSPTSPSYSPTSPSYSPTSPSYS 1728
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP YSPTSPAYSP SPSYSP+SP
Sbjct: 1729 PTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSP 1774
Score = 137 bits (346), Expect = 3e-31
Identities = 69/105 (65%), Positives = 77/105 (73%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YSP
Sbjct: 1696 SPSY--SPTSPIYSPTSPSYSPT--SPSYSPTS-PSYSPTSPKYSPTSPSYSPTSPSYSP 1750
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSPTSP YSP SP+YSPSSP YSPTSP YSPTSP YSPTSP
Sbjct: 1751 SSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSP 1795
Score = 136 bits (343), Expect = 6e-31
Identities = 74/106 (69%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SPN SPT+ +SP +SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1808 SPSYSPSSPNY--SPTSPT-YSPT--SPTYSPTS-PAYSPTSPAYSPTSPAYSPTSPVYS 1861
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTS YSPTSP
Sbjct: 1862 PTSPAYSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSP 1907
Score = 135 bits (340), Expect = 1e-30
Identities = 72/106 (67%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP +SPTS P YSP+SP YSPSSP YSPTSP YS
Sbjct: 1710 SPSYSPTSPSY--SPTSPS-YSPT--SPKYSPTS-PSYSPTSPSYSPSSPQYSPTSPAYS 1763
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSP+SP YSPTSP YSP+SP YSPTSP YSPTSPSYSP+SP
Sbjct: 1764 PQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSP 1809
Score = 135 bits (340), Expect = 1e-30
Identities = 79/129 (61%), Positives = 87/129 (67%), Gaps = 7/129 (5%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPG 205
+P SP S T SP+Y SP SPT+ A +SP A+SPTS SP
Sbjct: 1815 SPNYSPTSPT---YSPTSPTYSPTSP--AYSPTSPA-YSPT--SPAYSPTSPVYSPTSPA 1866
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
YSP+SP YSP+SP YSPTSP YSPTSP YSPTS GYSPTSP YSPSSP YSPT+P YSPT
Sbjct: 1867 YSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPT 1926
Query: 386 SPSYSPTSP 412
SP YSP SP
Sbjct: 1927 SPKYSPASP 1935
Score = 134 bits (338), Expect = 2e-30
Identities = 71/106 (66%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ ++SP ++SPTS P YSPSSP YSP+SP YSP SP YS
Sbjct: 1717 SPSYSPTSPSY--SPTSP-KYSPT--SPSYSPTS-PSYSPSSPQYSPTSPAYSPQSPSYS 1770
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSPTSP YSPTSP YSP+SP YSPTSP+YSP+SPSYSP+SP
Sbjct: 1771 PSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSP 1816
Score = 130 bits (326), Expect = 6e-29
Identities = 72/112 (64%), Positives = 79/112 (70%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP + Q+SP A+SP SP YSPSSP YSP+SP YSPTSP YSP
Sbjct: 1738 SPSY--SPTSPSYSPSSPQYSPT--SPAYSP-QSPSYSPSSPSYSPTSPKYSPTSPKYSP 1792
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP-------AYSPTSPSYSPTSP 412
TSP YSPTSP YSP+SP+YSPSSP YSPTSP YSPTSP+YSPTSP
Sbjct: 1793 TSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSP 1844
Score = 127 bits (319), Expect = 4e-28
Identities = 74/129 (57%), Positives = 87/129 (67%), Gaps = 7/129 (5%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPG 205
+P SP S T SP+Y SP SPT+ A +SP +SPTS SP
Sbjct: 1822 SPTYSPTSPT---YSPTSPAYSPTSP--AYSPTSPA-YSPT--SPVYSPTSPAYSPTSPK 1873
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
YSP+SP YSP+SP YSPTSP YSPTS GYSPTSP YSP+SP YSP++P YSPTSP YSP
Sbjct: 1874 YSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPA 1933
Query: 386 SPSYSPTSP 412
SP+YSP++P
Sbjct: 1934 SPTYSPSTP 1942
Score = 116 bits (290), Expect = 9e-25
Identities = 66/114 (57%), Positives = 79/114 (69%), Gaps = 9/114 (7%)
Frame = +2
Query: 98 SPSYMLSPNLRL-SPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP + SPT+ A +SP +SPTS P YSP+SP YSP+SP YSPTS GYS
Sbjct: 1850 SPAY--SPTSPVYSPTSPA-YSPT--SPKYSPTS-PKYSPTSPIYSPTSPAYSPTSTGYS 1903
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP--------SYSPTSP 412
PTSP YSP+SP YSPT+P YSP+SP YSP SP YSP++P +YSP P
Sbjct: 1904 PTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEP 1957
Score = 57.4 bits (137), Expect = 5e-07
Identities = 51/124 (41%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP- 223
+P SP S T Y SP Y S + + SPT Q+SP +SP +SP YSPS+P
Sbjct: 1892 SPAYSPTS-TGYSP--TSPEYSPS-SPKYSPTTP-QYSPT--SPKYSP-ASPTYSPSTPT 1943
Query: 224 -------GYSPSSPGYSPTSPGYSPT-SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
YSP P YSP +P YSP +P YSP G+S T+ + S YSP+SP+
Sbjct: 1944 DKSVGSINYSPLEPDYSPGTPTYSPDGTPTYSPDGRGFSGTA-AKNISPMDYSPSSPS-G 2001
Query: 380 PTSP 391
P +P
Sbjct: 2002 PGTP 2005
[21][TOP]
>UniRef100_A8PU11 DNA-directed RNA polymerase n=1 Tax=Brugia malayi RepID=A8PU11_BRUMA
Length = 1943
Score = 157 bits (398), Expect = 3e-37
Identities = 85/133 (63%), Positives = 102/133 (76%), Gaps = 2/133 (1%)
Frame = +2
Query: 20 YMDGLDFGMTPGRSPIS-GTPYHEGMMSPSY-MLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
Y GL+ +PG SP S +PY G SP+Y ++SP R SPT+ + +SP ++SPT
Sbjct: 1655 YGSGLEGLSSPGYSPTSPASPY--GASSPAYGVMSP--RYSPTSPS-YSPT--SPSYSPT 1707
Query: 194 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
S P YSP+SP YSP+SP YSPTSPGYSPTSP YSPTSP YSPTSP+YSP+SPGYSP+SP
Sbjct: 1708 S-PSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPASPGYSPSSPR 1766
Query: 374 YSPTSPSYSPTSP 412
YSPTSP+YSPTSP
Sbjct: 1767 YSPTSPAYSPTSP 1779
Score = 137 bits (345), Expect = 4e-31
Identities = 76/122 (62%), Positives = 86/122 (70%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+PG SP S + SPSY SPT+ + +SP G +SP SSP YSP+SP
Sbjct: 1729 SPGYSPTSPS---YSPTSPSY--------SPTSPS-YSPASPG--YSP-SSPRYSPTSPA 1773
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
YSP+SP YSPTSP YSPTSP YSPTSP YSP SP YSPSSP YSPTSP YSPTSP+YSP+
Sbjct: 1774 YSPTSPTYSPTSPAYSPTSPTYSPTSPSYSPASPGYSPSSPRYSPTSPTYSPTSPAYSPS 1833
Query: 407 SP 412
SP
Sbjct: 1834 SP 1835
Score = 126 bits (317), Expect = 7e-28
Identities = 76/135 (56%), Positives = 88/135 (65%), Gaps = 13/135 (9%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPG 205
+PG SP S SP+Y SP SPT+ A +SP +SPTS SPG
Sbjct: 1757 SPGYSPSSP---RYSPTSPAYSPTSPTY--SPTSPA-YSPT--SPTYSPTSPSYSPASPG 1808
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPS------SPGYSPTS 367
YSPSSP YSP+SP YSPTSP YSP+SP YSP+SP YSP+SP Y+PS SP YSPTS
Sbjct: 1809 YSPSSPRYSPTSPTYSPTSPAYSPSSPQYSPSSPQYSPSSPQYTPSSPAGDASPAYSPTS 1868
Query: 368 PAYSPTSPSYSPTSP 412
P YSP+SP YSP+SP
Sbjct: 1869 PQYSPSSPRYSPSSP 1883
Score = 122 bits (306), Expect = 1e-26
Identities = 72/143 (50%), Positives = 87/143 (60%), Gaps = 10/143 (6%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
PSY G +P S T SP+Y SP+ + Q+SP ++P+
Sbjct: 1800 PSYSPASP-GYSPSSPRYSPTSPTYSPTSPAY--SPSSPQYSPSSPQYSP--SSPQYTPS 1854
Query: 194 S-----SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPG-----YSPTSPTYSPS 343
S SP YSP+SP YSPSSP YSP+SP YSPTSP YSP+SPG YS +SP YSPS
Sbjct: 1855 SPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSPGGAGTSYSRSSPQYSPS 1914
Query: 344 SPGYSPTSPAYSPTSPSYSPTSP 412
SP YSP+SP YSP+SP YSP+SP
Sbjct: 1915 SPQYSPSSPQYSPSSPQYSPSSP 1937
Score = 118 bits (296), Expect = 2e-25
Identities = 78/152 (51%), Positives = 90/152 (59%), Gaps = 30/152 (19%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-----LSPNL-RLSPTNDAQFSPYVGGMAFSPTS---- 196
+P SP S T SPSY SP+ R SPT+ +SP A+SP+S
Sbjct: 1785 SPAYSPTSPT---YSPTSPSYSPASPGYSPSSPRYSPTSPT-YSPT--SPAYSPSSPQYS 1838
Query: 197 --SPGYSPSSPGYSPSSPG------YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG 352
SP YSPSSP Y+PSSP YSPTSP YSP+SP YSP+SP YSPTSP YSPSSPG
Sbjct: 1839 PSSPQYSPSSPQYTPSSPAGDASPAYSPTSPQYSPSSPRYSPSSPQYSPTSPQYSPSSPG 1898
Query: 353 ------------YSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSP+SP YSP+SP
Sbjct: 1899 GAGTSYSRSSPQYSPSSPQYSPSSPQYSPSSP 1930
Score = 108 bits (270), Expect = 2e-22
Identities = 70/151 (46%), Positives = 86/151 (56%), Gaps = 19/151 (12%)
Frame = +2
Query: 17 SYMDGLDFGMTPGRSPISG--TPYHEGMMSP---SYMLSPNLRLSPTNDAQ--FSPYVGG 175
S M M+P ++P + TP + SP S M SP+ ++ FSPY GG
Sbjct: 1566 SSMSPASSAMSPAQTPWNAGTTPAYGAAWSPATGSGMTPGGAGFSPSGHSEGGFSPYGGG 1625
Query: 176 MAFSPTSSPG----YSPSSPG-YSPSSPGYSP-----TSPGYSPTSPG--YSPTSPGYSP 319
++SP S G SPS G YSP++ Y +SPGYSPTSP Y +SP Y
Sbjct: 1626 GSWSPGSPGGSLGGMSPSGAGAYSPAASDYGSGLEGLSSPGYSPTSPASPYGASSPAYGV 1685
Query: 320 TSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1686 MSPRYSPTSPSYSPTSPSYSPTSPSYSPTSP 1716
Score = 54.3 bits (129), Expect = 4e-06
Identities = 37/70 (52%), Positives = 43/70 (61%), Gaps = 10/70 (14%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMA----------FSPTSSPGYSPSSPGYSPSSPG 247
SP Y S + + SPT+ Q+SP G A +SP SSP YSPSSP YSPSSP
Sbjct: 1875 SPRYSPS-SPQYSPTSP-QYSPSSPGGAGTSYSRSSPQYSP-SSPQYSPSSPQYSPSSPQ 1931
Query: 248 YSPTSPGYSP 277
YSP+SP YSP
Sbjct: 1932 YSPSSPQYSP 1941
[22][TOP]
>UniRef100_UPI00005A0B1E PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 9 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1E
Length = 1851
Score = 156 bits (395), Expect = 6e-37
Identities = 79/129 (61%), Positives = 91/129 (70%)
Frame = +2
Query: 26 DGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
DG G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S G
Sbjct: 1492 DGFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGG 1544
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
Y+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPT
Sbjct: 1545 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1604
Query: 386 SPSYSPTSP 412
SPSYSPTSP
Sbjct: 1605 SPSYSPTSP 1613
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1535 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1589
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1590 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1648
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1649 SYSPTSPSYSPTSP 1662
Score = 139 bits (351), Expect = 7e-32
Identities = 72/106 (67%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1612 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1665
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSP+SP
Sbjct: 1666 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPSSP 1711
Score = 137 bits (344), Expect = 5e-31
Identities = 70/106 (66%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1619 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1672
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSP+SPSYSPTSP
Sbjct: 1673 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPSSPSYSPTSP 1718
Score = 136 bits (343), Expect = 6e-31
Identities = 70/106 (66%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1633 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1686
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+ P Y+PTSP YSPTSP+YSPSSP YSPTSP Y+PTSPSYSP+SP
Sbjct: 1687 PSRPNYTPTSPSYSPTSPSYSPSSPSYSPTSPKYTPTSPSYSPSSP 1732
Score = 135 bits (339), Expect = 2e-30
Identities = 70/106 (66%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSPS P Y+P+SP YSPTSP YS
Sbjct: 1654 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PNYSPSRPNYTPTSPSYSPTSPSYS 1707
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSPTSP Y+PTSP+YSPSSP Y+PTSP YSPTSP YSPTSP
Sbjct: 1708 PSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1753
Score = 133 bits (335), Expect = 5e-30
Identities = 72/122 (59%), Positives = 88/122 (72%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P R + T SPSY S + SPT+ +++P ++SP SSP Y+P+SP
Sbjct: 1686 SPSRPNYTPTSPSYSPTSPSYSPS-SPSYSPTSP-KYTPT--SPSYSP-SSPEYTPTSPK 1740
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
YSP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPT
Sbjct: 1741 YSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 1800
Query: 407 SP 412
SP
Sbjct: 1801 SP 1802
Score = 132 bits (333), Expect = 9e-30
Identities = 73/123 (59%), Positives = 85/123 (69%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
TP S T SPSY SP + +PT+ + +SP ++PTS P YSP+SP
Sbjct: 1693 TPTSPSYSPTSPSYSPSSPSYSPTSP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSP 1746
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPT+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSP
Sbjct: 1747 KYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSP 1806
Query: 404 TSP 412
TSP
Sbjct: 1807 TSP 1809
Score = 129 bits (323), Expect = 1e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 1724 SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 1778
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1779 TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1826
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1738 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 1791
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1792 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1840
Score = 119 bits (297), Expect = 1e-25
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ +SP +SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1745 SPKYSPTSP--KYSPTSPT-YSPTTP--KYSPTS-PTYSPTSPVYTPTSPKYSPTSPTYS 1798
Query: 275 PTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1799 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1844
[23][TOP]
>UniRef100_C1MI48 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MI48_9CHLO
Length = 1694
Score = 156 bits (395), Expect = 6e-37
Identities = 89/178 (50%), Positives = 97/178 (54%), Gaps = 49/178 (27%)
Frame = +2
Query: 26 DGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDA-QFSPYV---------GG 175
D L G TP R TP G SPS++LSP SP +D +FSPY G
Sbjct: 1469 DALGAGTTPARGT---TPGGVGSASPSFLLSPQAHASPFDDTMRFSPYTEGGGGGGGGDG 1525
Query: 176 MAFSPTS---------------------------------------SPGYSPSSPGYSPS 238
M FSPTS SP YSP+SP YSP+
Sbjct: 1526 MGFSPTSPGYSPTSPAYSPTSPAYSPTSPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPT 1585
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 1586 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1643
Score = 129 bits (324), Expect = 1e-28
Identities = 74/130 (56%), Positives = 81/130 (62%), Gaps = 10/130 (7%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNL-RLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S P S SP SPT+ A +SP A+SPTS P YSP+SP
Sbjct: 1553 SPAYSPTSPAPTSPAYSPTSPAYSPTSPAYSPTSPA-YSPT--SPAYSPTS-PAYSPTSP 1608
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTS---------PAY 376
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTS P
Sbjct: 1609 AYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPQYSPTSVGLSDVENAPTR 1668
Query: 377 SPTSPSYSPT 406
SPTSP YSPT
Sbjct: 1669 SPTSPQYSPT 1678
Score = 79.3 bits (194), Expect = 1e-13
Identities = 51/98 (52%), Positives = 58/98 (59%), Gaps = 17/98 (17%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1593 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 1646
Query: 275 PTSPGYSPTS----------------PGYSPTSPTYSP 340
PTSP YSPTS P YSPT +SP
Sbjct: 1647 PTSPQYSPTSVGLSDVENAPTRSPTSPQYSPTEGAFSP 1684
Score = 67.4 bits (163), Expect = 5e-10
Identities = 46/95 (48%), Positives = 53/95 (55%), Gaps = 17/95 (17%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1600 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPQYS 1653
Query: 275 PTS----------------PGYSPTSPGYSPTSPT 331
PTS P YSPT +SP T
Sbjct: 1654 PTSVGLSDVENAPTRSPTSPQYSPTEGAFSPMETT 1688
[24][TOP]
>UniRef100_UPI00005A0B1D PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=2 Tax=Canis lupus familiaris
RepID=UPI00005A0B1D
Length = 1764
Score = 155 bits (393), Expect = 1e-36
Identities = 86/143 (60%), Positives = 97/143 (67%), Gaps = 10/143 (6%)
Frame = +2
Query: 14 PSYMDGLDFGMTP---GRSPISG--TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGM 178
PS M G+ MTP G +P G +P G MSPSY SPT+ A GG
Sbjct: 1532 PSPMGGISPAMTPWNQGATPAYGAWSPSVGGAMSPSY--------SPTSPAYEPRSPGGY 1583
Query: 179 -----AFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPS 343
++SPTS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+
Sbjct: 1584 TPQSPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1642
Query: 344 SPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1643 SPSYSPTSPSYSPTSPSYSPTSP 1665
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1573 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1627
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1628 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1686
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1687 SYSPTSPSYSPTSP 1700
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1650 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1703
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1704 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1749
Score = 134 bits (336), Expect = 4e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1657 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1710
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP+Y+P SP
Sbjct: 1711 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1756
Score = 133 bits (334), Expect = 7e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1664 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1717
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSP+ P Y+PTSP+YSP+SP YSPTSP Y+P SP+YSPTSP
Sbjct: 1718 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1763
Score = 120 bits (300), Expect = 6e-26
Identities = 62/100 (62%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1671 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1724
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
P+ P Y+PTSP YSPTSP+YSP+SP Y+P SP YSPTSP+
Sbjct: 1725 PSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1764
[25][TOP]
>UniRef100_UPI0000546D90 PREDICTED: im:7136071 isoform 1 n=1 Tax=Danio rerio
RepID=UPI0000546D90
Length = 1972
Score = 155 bits (393), Expect = 1e-36
Identities = 83/139 (59%), Positives = 96/139 (69%), Gaps = 11/139 (7%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEG-----MMSPSYM------LSPNLRLSPTNDAQFSPYVGG 175
G G +P SP G+P G + SP Y+ LSPN SPT+ A + P G
Sbjct: 1553 GFSPGYSPAWSPTPGSPGSPGPASPYIPSPGYITLHFGALSPNY--SPTSPA-YEPRSPG 1609
Query: 176 MAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY 355
++P SPGYSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP Y
Sbjct: 1610 GGYTP-QSPGYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1668
Query: 356 SPTSPAYSPTSPSYSPTSP 412
SPTSP+YSPTSPSYSPTSP
Sbjct: 1669 SPTSPSYSPTSPSYSPTSP 1687
Score = 148 bits (373), Expect = 2e-34
Identities = 80/125 (64%), Positives = 90/125 (72%), Gaps = 1/125 (0%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
G TP S T SPSY SPN SPT+ + +SP ++SPTS P YSP+
Sbjct: 1611 GYTPQSPGYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSPTS-PSYSPT 1664
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSY
Sbjct: 1665 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1724
Query: 398 SPTSP 412
SPTSP
Sbjct: 1725 SPTSP 1729
Score = 146 bits (369), Expect = 6e-34
Identities = 79/123 (64%), Positives = 89/123 (72%), Gaps = 4/123 (3%)
Frame = +2
Query: 56 RSPISG-TPYHEGMM--SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
RSP G TP G SPSY SP+ + N + SP ++SPTS P YSP+SP
Sbjct: 1606 RSPGGGYTPQSPGYSPTSPSYSPTSPSYSPTSPNYSPTSP-----SYSPTS-PSYSPTSP 1659
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1660 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1719
Query: 404 TSP 412
TSP
Sbjct: 1720 TSP 1722
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1658 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1711
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1712 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1757
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1679 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1732
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1733 PTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSP 1778
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1686 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1739
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1740 PTSPSYSPTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSP 1785
Score = 140 bits (352), Expect = 6e-32
Identities = 71/106 (66%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1693 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1746
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP+YSP+SP YSPTSP+YSPTSP+Y+PTSP
Sbjct: 1747 PTSPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSP 1792
Score = 140 bits (352), Expect = 6e-32
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y+
Sbjct: 1707 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYT 1760
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP Y+PTSP YSPTSPSYSPTSP
Sbjct: 1761 PTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSP 1806
Score = 139 bits (350), Expect = 1e-31
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1714 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYTPTSPSYS 1767
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1768 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPSSP 1813
Score = 134 bits (338), Expect = 2e-30
Identities = 66/106 (62%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SPN + + + SP ++SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1749 SPSYSPTSPNYTPTSPSYSPTSP-----SYSPTS-PSYSPTSPNYTPTSPNYSPTSPSYS 1802
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSP+SP Y+P SPTY+PSSP YSP+SP+YSPTSP Y+PTSP
Sbjct: 1803 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 1848
Score = 134 bits (337), Expect = 3e-30
Identities = 70/112 (62%), Positives = 84/112 (75%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SP+ SPT+ + +SP ++SPTS SP YSP+SP YSP+SP YSP
Sbjct: 1728 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTSPNYTPTSPSYSPTSPSYSPTSPSYSP 1782
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP Y+PTSP YSPTSP YSPTSP+YSPSSP Y+P SP Y+P+SPSYSP+SP
Sbjct: 1783 TSPNYTPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1834
Score = 134 bits (337), Expect = 3e-30
Identities = 72/127 (56%), Positives = 83/127 (65%), Gaps = 5/127 (3%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLS-----PNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
TP S T SPSY S P + +SP ++SPTS P Y+
Sbjct: 1788 TPTSPNYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSP--SSPSYSPTS-PKYT 1844
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
P+SP YSPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP++P YSPTSP YSPTSP
Sbjct: 1845 PTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSP 1904
Query: 392 SYSPTSP 412
+Y+PTSP
Sbjct: 1905 TYTPTSP 1911
Score = 133 bits (335), Expect = 5e-30
Identities = 70/106 (66%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + +PT+ + +SP ++PTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1833 SPSYSPTSP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSPKYSPTSPKYSPTSPTYS 1886
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PT+P YSPTSP YSPTSPTY+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1887 PTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSP 1932
Score = 132 bits (333), Expect = 9e-30
Identities = 69/105 (65%), Positives = 83/105 (79%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + SPT+ +++P ++SP SSP Y+P+SP YSP+SP YSPTSP YSP
Sbjct: 1826 SPSYSPS-SPSYSPTSP-KYTPT--SPSYSP-SSPEYTPTSPKYSPTSPKYSPTSPKYSP 1880
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 1881 TSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSP 1925
Score = 129 bits (324), Expect = 1e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 1847 SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 1901
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1902 TSPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1949
Score = 125 bits (313), Expect = 2e-27
Identities = 69/120 (57%), Positives = 80/120 (66%), Gaps = 15/120 (12%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ + N SP ++SPTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1742 SPSYSPTSPSYSPTSPNYTPTSP-----SYSPTS-PSYSPTSPSYSPTSPNYTPTSPNYS 1795
Query: 275 PTSPGYSPTSPGYSPTSP--------------TYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+SP +YSPSSP YSPTSP Y+PTSPSYSP+SP
Sbjct: 1796 PTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSP 1855
Score = 122 bits (307), Expect = 9e-27
Identities = 68/106 (64%), Positives = 79/106 (74%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1861 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPTYTPTSPKYS 1914
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YSP
Sbjct: 1915 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSP 1960
Score = 87.8 bits (216), Expect = 3e-16
Identities = 70/157 (44%), Positives = 86/157 (54%), Gaps = 29/157 (18%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
G+ FG P SP+SG TP++ G +P+Y SP+ + +P G FSP+
Sbjct: 1497 GMFFGSAP--SPMSGMSPAMTPWNTGA-TPAYGA-----WSPSVGSGMTP--GAAGFSPS 1546
Query: 194 SSPGYSPSSPGYSPS---SPGYSPTSPGYSPTSPGYSPTSPGY-----SPTSPTYSPS-- 343
++ S SPGYSP+ +PG SP SPG P SP Y P SPGY SP YSP+
Sbjct: 1547 AASDASGFSPGYSPAWSPTPG-SPGSPG--PASP-YIP-SPGYITLHFGALSPNYSPTSP 1601
Query: 344 --------------SPGYSPTSPAYSPTSPSYSPTSP 412
SPGYSPTSP+YSPTSPSYSPTSP
Sbjct: 1602 AYEPRSPGGGYTPQSPGYSPTSPSYSPTSPSYSPTSP 1638
Score = 77.4 bits (189), Expect = 5e-13
Identities = 49/89 (55%), Positives = 58/89 (65%), Gaps = 7/89 (7%)
Frame = +2
Query: 98 SPSYMLSPNL-RLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SP+Y SP + SPT+ +SP ++PTS SP YSP+SP YSP+SP YSP
Sbjct: 1882 SPTY--SPTTPKYSPTSPT-YSPT--SPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1936
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPS 343
TSP S YSPTSPGYSPTSPTYSP+
Sbjct: 1937 TSPKGST----YSPTSPGYSPTSPTYSPA 1961
[26][TOP]
>UniRef100_O00820 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acanthamoeba
castellanii RepID=O00820_ACACA
Length = 1569
Score = 155 bits (393), Expect = 1e-36
Identities = 84/133 (63%), Positives = 95/133 (71%), Gaps = 1/133 (0%)
Frame = +2
Query: 17 SYMDGLDFG-MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
SY +DFG +PGR S +P SPSY SP + +SP G +SP
Sbjct: 1442 SYSPYVDFGEFSPGRGSFSPSP-----SSPSY--------SPASPG-YSP--AGAGYSP- 1484
Query: 194 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
SSPGYSPSSPGYSPSSPGYSP SPGYSP+SP YSPTSP YSP SP+YSP+SP YSPTSP+
Sbjct: 1485 SSPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSPASPSYSPTSPAYSPTSPS 1544
Query: 374 YSPTSPSYSPTSP 412
YSP+SPSYSPTSP
Sbjct: 1545 YSPSSPSYSPTSP 1557
Score = 75.5 bits (184), Expect = 2e-12
Identities = 43/87 (49%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Frame = +2
Query: 47 TPGRSPISG--TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
+PG SP S +P G S SP+ ++SP ++SPTS P YSP+S
Sbjct: 1486 SPGYSPSSPGYSPSSPGYSPASPGYSPSSPAYSPTSPKYSP--ASPSYSPTS-PAYSPTS 1542
Query: 221 PGYSPSSPGYSPTSPGYSPTSPGYSPT 301
P YSPSSP YSPTSP YSPTSP YSP+
Sbjct: 1543 PSYSPSSPSYSPTSPSYSPTSPSYSPS 1569
[27][TOP]
>UniRef100_UPI000186501C hypothetical protein BRAFLDRAFT_115025 n=1 Tax=Branchiostoma floridae
RepID=UPI000186501C
Length = 1956
Score = 155 bits (392), Expect = 1e-36
Identities = 81/133 (60%), Positives = 93/133 (69%), Gaps = 9/133 (6%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYV----GGMA-----FSPT 193
G +P SP G+P G SP Y+ SP +SP+ Y+ GGM +SPT
Sbjct: 1560 GYSPAWSPTPGSPGSPGPASP-YIPSPGGPMSPSYSPASPAYMPRSPGGMTPQSPGYSPT 1618
Query: 194 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
S P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+
Sbjct: 1619 S-PSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677
Query: 374 YSPTSPSYSPTSP 412
YSPTSPSYSPTSP
Sbjct: 1678 YSPTSPSYSPTSP 1690
Score = 154 bits (390), Expect = 2e-36
Identities = 84/134 (62%), Positives = 95/134 (70%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+YM GMTP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1598 PAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNY--SPTSPS-YSPT--SPSYSP 1652
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1712 SYSPTSPSYSPTSP 1725
Score = 141 bits (356), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1668 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1721
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP Y+PTSP YSPTSPSYSPTSP
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSP 1767
Score = 139 bits (351), Expect = 7e-32
Identities = 72/106 (67%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1682 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1735
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP YSP+SP YSPTSP+YSP SPSYSPTSP
Sbjct: 1736 PTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSP 1781
Score = 138 bits (347), Expect = 2e-31
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1689 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1742
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP Y+PTSP YSPTSP+YSP+SP YSP SP+YSPTSPSYSP+SP
Sbjct: 1743 PTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSP 1788
Score = 136 bits (343), Expect = 6e-31
Identities = 70/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y+
Sbjct: 1696 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYT 1749
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSP+SP+YSP SP
Sbjct: 1750 PTSPKYSPTSPSYSPTSPSYSPASPSYSPTSPSYSPSSPNYSPQSP 1795
Score = 135 bits (340), Expect = 1e-30
Identities = 70/106 (66%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1710 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYTPTSPKYSPTSPSYS 1763
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSP SP YSPTSP+YSPSSP YSP SP+YSP+SPSYSP+SP
Sbjct: 1764 PTSPSYSPASPSYSPTSPSYSPSSPNYSPQSPSYSPSSPSYSPSSP 1809
Score = 130 bits (326), Expect = 6e-29
Identities = 71/138 (51%), Positives = 84/138 (60%), Gaps = 3/138 (2%)
Frame = +2
Query: 8 QLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFS 187
Q PSY +P SP S P S SP+ + ++SP S
Sbjct: 1793 QSPSYSPS-----SPSYSPSSPNPSSPKYTPTSPKYSPSSPKYSPSSPKYSPT------S 1841
Query: 188 PTSSPG---YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 358
PT SP YSP+SP YSPS+P Y+PTSP YSP SP Y+PTSP YSPTSP+Y+P +P YS
Sbjct: 1842 PTYSPSSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYS 1901
Query: 359 PTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP+YSPTSP
Sbjct: 1902 PTSPKYSPTSPTYSPTSP 1919
Score = 125 bits (315), Expect = 1e-27
Identities = 67/111 (60%), Positives = 82/111 (73%), Gaps = 6/111 (5%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P Y+P+SP YSP+SP YSPTSP YS
Sbjct: 1717 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PNYTPTSPKYSPTSPSYSPTSPSYS 1770
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-----YSPTSP 412
P SP YSPTSP YSP+SP YSP SP YSP+SP+YSP+SP+ Y+PTSP
Sbjct: 1771 PASPSYSPTSPSYSPSSPNYSPQSPSYSPSSPSYSPSSPNPSSPKYTPTSP 1821
Score = 120 bits (302), Expect = 4e-26
Identities = 62/108 (57%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SP Y SP + A++SP ++SP S+P Y+P+SP YSP+SP Y+PTSP YSP
Sbjct: 1834 SPKY--SPTSPTYSPSSAKYSP--ASPSYSP-STPKYTPTSPKYSPASPTYTPTSPKYSP 1888
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP---AYSPTSPSYSPTSP 412
TSP Y+P +P YSPTSP YSP+SP YSPTSP YSPT+P YSP SP
Sbjct: 1889 TSPSYTPDTPKYSPTSPKYSPTSPTYSPTSPKGSTYSPTTPGYSPASP 1936
Score = 102 bits (253), Expect = 2e-20
Identities = 56/103 (54%), Positives = 66/103 (64%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP ++PTS P YSP+SP Y+P +P YSPTSP YSP
Sbjct: 1855 SPSY--SPSTPKYTPTSPKYSP--ASPTYTPTS-PKYSPTSPSYTPDTPKYSPTSPKYSP 1909
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
TSP YSPTSP S TYSP++PGYSP SP YSP SP T
Sbjct: 1910 TSPTYSPTSPKGS----TYSPTTPGYSPASPTYSPESPESRAT 1948
Score = 88.6 bits (218), Expect = 2e-16
Identities = 67/136 (49%), Positives = 76/136 (55%), Gaps = 13/136 (9%)
Frame = +2
Query: 44 MTPGRSPIS--GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
M+P +P GTP + G SP ++P A FSP A S S GYSP+
Sbjct: 1511 MSPQMTPWQQVGTPAYGGAWSPGL----GSGMTP-GAAGFSPSAASDA-SGMSPAGYSPA 1564
Query: 218 ---SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY--------SPSSPGYSPT 364
+PG SP SPG P SP Y P SPG P SP YSP SP Y +P SPGYSPT
Sbjct: 1565 WSPTPG-SPGSPG--PASP-YIP-SPG-GPMSPSYSPASPAYMPRSPGGMTPQSPGYSPT 1618
Query: 365 SPAYSPTSPSYSPTSP 412
SP+YSPTSPSYSP SP
Sbjct: 1619 SPSYSPTSPSYSPASP 1634
[28][TOP]
>UniRef100_C3ZES3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
RepID=C3ZES3_BRAFL
Length = 1934
Score = 155 bits (392), Expect = 1e-36
Identities = 81/133 (60%), Positives = 93/133 (69%), Gaps = 9/133 (6%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYV----GGMA-----FSPT 193
G +P SP G+P G SP Y+ SP +SP+ Y+ GGM +SPT
Sbjct: 1560 GYSPAWSPTPGSPGSPGPASP-YIPSPGGPMSPSYSPASPAYMPRSPGGMTPQSPGYSPT 1618
Query: 194 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
S P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+
Sbjct: 1619 S-PSYSPTSPSYSPASPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677
Query: 374 YSPTSPSYSPTSP 412
YSPTSPSYSPTSP
Sbjct: 1678 YSPTSPSYSPTSP 1690
Score = 154 bits (390), Expect = 2e-36
Identities = 84/134 (62%), Positives = 95/134 (70%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+YM GMTP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1598 PAYMPRSPGGMTPQSPGYSPTSPSYSPTSPSYSPASPNY--SPTSPS-YSPT--SPSYSP 1652
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1712 SYSPTSPSYSPTSP 1725
Score = 141 bits (356), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1668 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1721
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP Y+PTSP YSPTSPSYSPTSP
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSP 1767
Score = 139 bits (350), Expect = 1e-31
Identities = 72/106 (67%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1675 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1728
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPTSPSYSP SP
Sbjct: 1729 PTSPSYSPTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASP 1774
Score = 135 bits (340), Expect = 1e-30
Identities = 70/104 (67%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1682 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1735
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
PTSP YSPTSP Y+PTSP YSP+SP YSPTSP+YSP SPSYSPT
Sbjct: 1736 PTSPSYSPTSPNYTPTSPKYSPTSPSYSPTSPSYSPASPSYSPT 1779
Score = 128 bits (322), Expect = 2e-28
Identities = 69/133 (51%), Positives = 86/133 (64%), Gaps = 11/133 (8%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYV-----GGMAFSPTS----- 196
+P SP S + Y ++S L P+L ++ Q+SP +SPTS
Sbjct: 1766 SPSYSPASPS-YSPTILSNLTQLQPHLTPVHSHVTQYSPSSPKYSPSSPKYSPTSPTYSP 1824
Query: 197 -SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
S YSP+SP YSPS+P Y+PTSP YSP SP Y+PTSP YSPTSP+Y+P +P YSPTSP
Sbjct: 1825 SSAKYSPASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPK 1884
Query: 374 YSPTSPSYSPTSP 412
YSPTSP+YSPTSP
Sbjct: 1885 YSPTSPTYSPTSP 1897
Score = 122 bits (305), Expect = 2e-26
Identities = 69/139 (49%), Positives = 88/139 (63%), Gaps = 6/139 (4%)
Frame = +2
Query: 14 PSYMDGLDFGMT---PGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAF 184
PSY + +T P +P+ SP Y S + + SPT+ +SP +
Sbjct: 1774 PSYSPTILSNLTQLQPHLTPVHSHVTQYSPSSPKYSPS-SPKYSPTSPT-YSP--SSAKY 1829
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SP +SP YSPS+P Y+P+SP YSP SP Y+PTSP YSPTSP Y+P +P YSP+SP YSPT
Sbjct: 1830 SP-ASPSYSPSTPKYTPTSPKYSPASPTYTPTSPKYSPTSPSYTPDTPKYSPTSPKYSPT 1888
Query: 365 SPAYSPTSP---SYSPTSP 412
SP YSPTSP +YSPT+P
Sbjct: 1889 SPTYSPTSPKGSTYSPTTP 1907
Score = 102 bits (253), Expect = 2e-20
Identities = 56/103 (54%), Positives = 66/103 (64%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP ++PTS P YSP+SP Y+P +P YSPTSP YSP
Sbjct: 1833 SPSY--SPSTPKYTPTSPKYSP--ASPTYTPTS-PKYSPTSPSYTPDTPKYSPTSPKYSP 1887
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
TSP YSPTSP S TYSP++PGYSP SP YSP SP T
Sbjct: 1888 TSPTYSPTSPKGS----TYSPTTPGYSPASPTYSPESPESRAT 1926
Score = 88.6 bits (218), Expect = 2e-16
Identities = 67/136 (49%), Positives = 76/136 (55%), Gaps = 13/136 (9%)
Frame = +2
Query: 44 MTPGRSPIS--GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
M+P +P GTP + G SP ++P A FSP A S S GYSP+
Sbjct: 1511 MSPQMTPWQQVGTPAYGGAWSPGL----GSGMTP-GAAGFSPSAASDA-SGMSPAGYSPA 1564
Query: 218 ---SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY--------SPSSPGYSPT 364
+PG SP SPG P SP Y P SPG P SP YSP SP Y +P SPGYSPT
Sbjct: 1565 WSPTPG-SPGSPG--PASP-YIP-SPG-GPMSPSYSPASPAYMPRSPGGMTPQSPGYSPT 1618
Query: 365 SPAYSPTSPSYSPTSP 412
SP+YSPTSPSYSP SP
Sbjct: 1619 SPSYSPTSPSYSPASP 1634
[29][TOP]
>UniRef100_UPI00019270BB PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
isoform 1 n=1 Tax=Hydra magnipapillata
RepID=UPI00019270BB
Length = 2041
Score = 155 bits (391), Expect = 2e-36
Identities = 84/138 (60%), Positives = 94/138 (68%), Gaps = 6/138 (4%)
Frame = +2
Query: 17 SYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS 196
S D + G +P SP +P +MSPSY SPN SP G +SPTS
Sbjct: 1572 SPQDSMSLG-SPDSSPYIPSP-SRNVMSPSY--SPNSPAFNPQSPAMSPSSPG--YSPTS 1625
Query: 197 ------SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 358
SPGYSP+SP YSP+SPGYSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YS
Sbjct: 1626 PLYSPTSPGYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1685
Query: 359 PTSPAYSPTSPSYSPTSP 412
PTSP+YSPTSPSYSPTSP
Sbjct: 1686 PTSPSYSPTSPSYSPTSP 1703
Score = 152 bits (384), Expect = 1e-35
Identities = 81/154 (52%), Positives = 97/154 (62%), Gaps = 21/154 (13%)
Frame = +2
Query: 14 PSYMDG----LDFGMTPGRSPISGTPYHE-------GMMSPSYMLSPNLRLSPTNDAQFS 160
P Y DG L GMTPG + S + + + G SP++ ++ L + + +
Sbjct: 1529 PGYGDGWSPALGSGMTPGAASFSPSAHSDASGFSPAGGFSPAWSPQDSMSLGSPDSSPYI 1588
Query: 161 PYVGGMAFSPTS----------SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPG 310
P SP+ SP SPSSPGYSP+SP YSPTSPGYSPTSP YSPTSPG
Sbjct: 1589 PSPSRNVMSPSYSPNSPAFNPQSPAMSPSSPGYSPTSPLYSPTSPGYSPTSPSYSPTSPG 1648
Query: 311 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1649 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682
Score = 145 bits (365), Expect = 2e-33
Identities = 79/123 (64%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG SP S + SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1646 SPGYSPTSPS---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1696
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1697 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPIYSPTSPSYSPTSPSYSPTSPSYSP 1756
Query: 404 TSP 412
TSP
Sbjct: 1757 TSP 1759
Score = 144 bits (363), Expect = 3e-33
Identities = 79/126 (62%), Positives = 90/126 (71%), Gaps = 4/126 (3%)
Frame = +2
Query: 47 TPGRSPISG--TPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
+PG SP S +P G SPSY SPT+ +SP ++SPTS P YSP
Sbjct: 1618 SPGYSPTSPLYSPTSPGYSPTSPSY--------SPTSPG-YSPT--SPSYSPTS-PSYSP 1665
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPS
Sbjct: 1666 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1725
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1726 YSPTSP 1731
Score = 142 bits (357), Expect = 2e-32
Identities = 75/106 (70%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + SPT+ ++SP +SPTS P YSPSSP YSPSSP YSPTSP YS
Sbjct: 1800 SPSYSPTSP--KYSPTSP-KYSPT--SPKYSPTS-PSYSPSSPSYSPSSPNYSPTSPTYS 1853
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP+YSPTSP
Sbjct: 1854 PTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPTSP 1899
Score = 139 bits (351), Expect = 7e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1681 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPIYS 1734
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1735 PTSPSYSPTSPSYSPTSPSYSPTSPKYSPTSPSYSPTSPSYSPSSP 1780
Score = 139 bits (351), Expect = 7e-32
Identities = 73/111 (65%), Positives = 85/111 (76%), Gaps = 6/111 (5%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDA------QFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 259
SPSY S + + SPT+ A +SP ++SPTS P YSP+SP YSP+SP YSPT
Sbjct: 1772 SPSYSPS-SPQYSPTSPAYSPQSPSYSP--SSPSYSPTS-PKYSPTSPKYSPTSPKYSPT 1827
Query: 260 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSP+SP YSP+SP YSPTSPTYSP+SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 1828 SPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSP 1878
Score = 139 bits (351), Expect = 7e-32
Identities = 79/136 (58%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Frame = +2
Query: 8 QLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAF 184
Q PSY +P S T SP Y SP + SPT+ + +SP ++
Sbjct: 1792 QSPSY--------SPSSPSYSPTSPKYSPTSPKYSPTSP--KYSPTSPS-YSP--SSPSY 1838
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SP SSP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPT
Sbjct: 1839 SP-SSPNYSPTSPTYSPTSPTYSPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPAYSPT 1897
Query: 365 SPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP
Sbjct: 1898 SPKYSPTSPKYSPTSP 1913
Score = 139 bits (349), Expect = 1e-31
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1702 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PIYSPTSPSYSPTSPSYSPTSPSYS 1755
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP YSPTSPAYSP SPSYSP+SP
Sbjct: 1756 PTSPKYSPTSPSYSPTSPSYSPSSPQYSPTSPAYSPQSPSYSPSSP 1801
Score = 137 bits (346), Expect = 3e-31
Identities = 69/105 (65%), Positives = 77/105 (73%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YSP
Sbjct: 1723 SPSY--SPTSPIYSPTSPSYSPT--SPSYSPTS-PSYSPTSPKYSPTSPSYSPTSPSYSP 1777
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSPTSP YSP SP+YSPSSP YSPTSP YSPTSP YSPTSP
Sbjct: 1778 SSPQYSPTSPAYSPQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSP 1822
Score = 136 bits (343), Expect = 6e-31
Identities = 74/106 (69%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SPN SPT+ +SP +SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1835 SPSYSPSSPNY--SPTSPT-YSPT--SPTYSPTS-PAYSPTSPAYSPTSPAYSPTSPVYS 1888
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTS YSPTSP
Sbjct: 1889 PTSPAYSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSP 1934
Score = 135 bits (340), Expect = 1e-30
Identities = 72/106 (67%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP +SPTS P YSP+SP YSPSSP YSPTSP YS
Sbjct: 1737 SPSYSPTSPSY--SPTSPS-YSPT--SPKYSPTS-PSYSPTSPSYSPSSPQYSPTSPAYS 1790
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSP+SP YSPTSP YSP+SP YSPTSP YSPTSPSYSP+SP
Sbjct: 1791 PQSPSYSPSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSP 1836
Score = 135 bits (340), Expect = 1e-30
Identities = 79/129 (61%), Positives = 87/129 (67%), Gaps = 7/129 (5%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPG 205
+P SP S T SP+Y SP SPT+ A +SP A+SPTS SP
Sbjct: 1842 SPNYSPTSPT---YSPTSPTYSPTSP--AYSPTSPA-YSPT--SPAYSPTSPVYSPTSPA 1893
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
YSP+SP YSP+SP YSPTSP YSPTSP YSPTS GYSPTSP YSPSSP YSPT+P YSPT
Sbjct: 1894 YSPTSPKYSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPT 1953
Query: 386 SPSYSPTSP 412
SP YSP SP
Sbjct: 1954 SPKYSPASP 1962
Score = 134 bits (338), Expect = 2e-30
Identities = 71/106 (66%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ ++SP ++SPTS P YSPSSP YSP+SP YSP SP YS
Sbjct: 1744 SPSYSPTSPSY--SPTSP-KYSPT--SPSYSPTS-PSYSPSSPQYSPTSPAYSPQSPSYS 1797
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSPTSP YSPTSP YSP+SP YSPTSP+YSP+SPSYSP+SP
Sbjct: 1798 PSSPSYSPTSPKYSPTSPKYSPTSPKYSPTSPSYSPSSPSYSPSSP 1843
Score = 130 bits (326), Expect = 6e-29
Identities = 72/112 (64%), Positives = 79/112 (70%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP + Q+SP A+SP SP YSPSSP YSP+SP YSPTSP YSP
Sbjct: 1765 SPSY--SPTSPSYSPSSPQYSPT--SPAYSP-QSPSYSPSSPSYSPTSPKYSPTSPKYSP 1819
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP-------AYSPTSPSYSPTSP 412
TSP YSPTSP YSP+SP+YSPSSP YSPTSP YSPTSP+YSPTSP
Sbjct: 1820 TSPKYSPTSPSYSPSSPSYSPSSPNYSPTSPTYSPTSPTYSPTSPAYSPTSP 1871
Score = 127 bits (319), Expect = 4e-28
Identities = 74/129 (57%), Positives = 87/129 (67%), Gaps = 7/129 (5%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPG 205
+P SP S T SP+Y SP SPT+ A +SP +SPTS SP
Sbjct: 1849 SPTYSPTSPT---YSPTSPAYSPTSP--AYSPTSPA-YSPT--SPVYSPTSPAYSPTSPK 1900
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
YSP+SP YSP+SP YSPTSP YSPTS GYSPTSP YSP+SP YSP++P YSPTSP YSP
Sbjct: 1901 YSPTSPKYSPTSPIYSPTSPAYSPTSTGYSPTSPEYSPSSPKYSPTTPQYSPTSPKYSPA 1960
Query: 386 SPSYSPTSP 412
SP+YSP++P
Sbjct: 1961 SPTYSPSTP 1969
Score = 116 bits (290), Expect = 9e-25
Identities = 66/114 (57%), Positives = 79/114 (69%), Gaps = 9/114 (7%)
Frame = +2
Query: 98 SPSYMLSPNLRL-SPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP + SPT+ A +SP +SPTS P YSP+SP YSP+SP YSPTS GYS
Sbjct: 1877 SPAY--SPTSPVYSPTSPA-YSPT--SPKYSPTS-PKYSPTSPIYSPTSPAYSPTSTGYS 1930
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP--------SYSPTSP 412
PTSP YSP+SP YSPT+P YSP+SP YSP SP YSP++P +YSP P
Sbjct: 1931 PTSPEYSPSSPKYSPTTPQYSPTSPKYSPASPTYSPSTPTDKSVGSINYSPLEP 1984
Score = 57.4 bits (137), Expect = 5e-07
Identities = 51/124 (41%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP- 223
+P SP S T Y SP Y S + + SPT Q+SP +SP +SP YSPS+P
Sbjct: 1919 SPAYSPTS-TGYSP--TSPEYSPS-SPKYSPTTP-QYSPT--SPKYSP-ASPTYSPSTPT 1970
Query: 224 -------GYSPSSPGYSPTSPGYSPT-SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
YSP P YSP +P YSP +P YSP G+S T+ + S YSP+SP+
Sbjct: 1971 DKSVGSINYSPLEPDYSPGTPTYSPDGTPTYSPDGRGFSGTA-AKNISPMDYSPSSPS-G 2028
Query: 380 PTSP 391
P +P
Sbjct: 2029 PGTP 2032
[30][TOP]
>UniRef100_UPI000186D846 predicted protein n=1 Tax=Pediculus humanus corporis
RepID=UPI000186D846
Length = 1885
Score = 155 bits (391), Expect = 2e-36
Identities = 81/135 (60%), Positives = 95/135 (70%), Gaps = 11/135 (8%)
Frame = +2
Query: 41 GMTPGRSPIS---GTPYHEGMMSPSYMLSPNLRLSPT---NDAQFSPYVGGMA-----FS 187
G++PG SP S G+P G + Y+ SP +SP+ + F+P M +S
Sbjct: 1529 GLSPGYSPWSPQPGSPSSPGPSNSPYVPSPGGGMSPSYSPSSPAFAPTSPSMTPTSSNYS 1588
Query: 188 PTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTS 367
PTS P YSPSSP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTS
Sbjct: 1589 PTS-PSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1647
Query: 368 PAYSPTSPSYSPTSP 412
P+YSPTSPSYSPTSP
Sbjct: 1648 PSYSPTSPSYSPTSP 1662
Score = 148 bits (374), Expect = 2e-34
Identities = 77/123 (62%), Positives = 86/123 (69%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
MTP S S T SP+Y SPN +SP ++SPTS P YSP+SP
Sbjct: 1580 MTPTSSNYSPTSPSYSPSSPNY--SPNSPSYSPTSPSYSPT--SPSYSPTS-PSYSPTSP 1634
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1635 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1694
Query: 404 TSP 412
TSP
Sbjct: 1695 TSP 1697
Score = 147 bits (371), Expect = 4e-34
Identities = 77/132 (58%), Positives = 87/132 (65%), Gaps = 8/132 (6%)
Frame = +2
Query: 41 GMTPGRSPISGT--PYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS------ 196
GM+P SP S P M S SP + +SP ++SPTS
Sbjct: 1561 GMSPSYSPSSPAFAPTSPSMTPTSSNYSPTSPSYSPSSPNYSP--NSPSYSPTSPSYSPT 1618
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+Y
Sbjct: 1619 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1678
Query: 377 SPTSPSYSPTSP 412
SPTSPSYSPTSP
Sbjct: 1679 SPTSPSYSPTSP 1690
Score = 139 bits (349), Expect = 1e-31
Identities = 75/123 (60%), Positives = 88/123 (71%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P S T SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1602 SPNSPSYSPTSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1655
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YS TSP+YSPTSPSYSP
Sbjct: 1656 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSRTSPSYSPTSPSYSP 1715
Query: 404 TSP 412
+SP
Sbjct: 1716 SSP 1718
Score = 134 bits (337), Expect = 3e-30
Identities = 69/106 (65%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1626 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1679
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YS +SP YSPTSP+YSP+SP+Y+P SP
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASP 1725
Score = 132 bits (333), Expect = 9e-30
Identities = 69/106 (65%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1633 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YS TSP+YSP+SP YSP+SP Y+P SPS+SPTSP
Sbjct: 1687 PTSPSYSPTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPTSP 1732
Score = 128 bits (321), Expect = 2e-28
Identities = 70/112 (62%), Positives = 82/112 (73%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1640 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1693
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS------YSPTSP 412
PTSP YS TSP YSPTSP+YSPSSP Y+P SP++SPTSPS YSP SP
Sbjct: 1694 PTSPSYSRTSPSYSPTSPSYSPSSPNYTPASPSFSPTSPSLYSSPRYSPASP 1745
Score = 126 bits (316), Expect = 9e-28
Identities = 74/136 (54%), Positives = 84/136 (61%), Gaps = 14/136 (10%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS-----SPGY 208
+P SP S + SPSY SP+ S N SP +FSPTS SP Y
Sbjct: 1689 SPSYSPTSPS---YSRTSPSYSPTSPSYSPSSPNYTPASP-----SFSPTSPSLYSSPRY 1740
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
SP+SP YSP SP YSPTSP YSPTSP Y+ SP Y+PTSP YSP+SP YSPTSP+YSP+S
Sbjct: 1741 SPASPSYSPGSPKYSPTSPSYSPTSPSYASVSPQYTPTSPQYSPTSPTYSPTSPSYSPSS 1800
Query: 389 PS--------YSPTSP 412
PS YSPTSP
Sbjct: 1801 PSHTPGASTRYSPTSP 1816
Score = 120 bits (302), Expect = 4e-26
Identities = 78/176 (44%), Positives = 95/176 (53%), Gaps = 48/176 (27%)
Frame = +2
Query: 29 GLDFG--MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSP 202
G+ FG +TP SP TP+++G +P+Y+ + SP + +P GG +FSP+ S
Sbjct: 1474 GMMFGNAVTPSMSP-QMTPWNQGE-TPAYVSA----WSPHAGSGMTP--GGPSFSPSGSS 1525
Query: 203 GYSPSSPGY--------SPSSPG------------------------------------- 247
S SPGY SPSSPG
Sbjct: 1526 DASGLSPGYSPWSPQPGSPSSPGPSNSPYVPSPGGGMSPSYSPSSPAFAPTSPSMTPTSS 1585
Query: 248 -YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSPTSP YSP+SP YSP SP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1586 NYSPTSPSYSPSSPNYSPNSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1641
Score = 117 bits (293), Expect = 4e-25
Identities = 71/131 (54%), Positives = 83/131 (63%), Gaps = 9/131 (6%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+PG S T SPSY S + + +PT+ Q+SP +SPTS P YSPSSP
Sbjct: 1748 SPGSPKYSPTSPSYSPTSPSYA-SVSPQYTPTSP-QYSPT--SPTYSPTS-PSYSPSSPS 1802
Query: 227 --------YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 382
YSP+SP YSPTS YSP SP YSP+S YSPTSPTY+P+SP YS +SP YSP
Sbjct: 1803 HTPGASTRYSPTSPKYSPTSLSYSPASPQYSPSSSKYSPTSPTYTPTSPDYSASSPTYSP 1862
Query: 383 TS-PSYSPTSP 412
T PSYSPTSP
Sbjct: 1863 TGPPSYSPTSP 1873
Score = 111 bits (278), Expect = 2e-23
Identities = 69/126 (54%), Positives = 81/126 (64%), Gaps = 21/126 (16%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG-------YSPSSPGYS 253
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YS
Sbjct: 1647 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1700
Query: 254 PTSPGYSPTSPGYSPTSPGYSPTSPT-------------YSPSSPGYSPTSPAYSPTSPS 394
TSP YSPTSP YSP+SP Y+P SP+ YSP+SP YSP SP YSPTSPS
Sbjct: 1701 RTSPSYSPTSPSYSPSSPNYTPASPSFSPTSPSLYSSPRYSPASPSYSPGSPKYSPTSPS 1760
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1761 YSPTSP 1766
Score = 96.7 bits (239), Expect = 7e-19
Identities = 53/94 (56%), Positives = 62/94 (65%), Gaps = 1/94 (1%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPS+ + R SPT+ +SPTS YSP+SP YSPSS YSPTSP Y+P
Sbjct: 1800 SPSHTPGASTRYSPTSPK----------YSPTSL-SYSPASPQYSPSSSKYSPTSPTYTP 1848
Query: 278 TSPGYSPTSPGYSPTSP-TYSPSSPGYSPTSPAY 376
TSP YS +SP YSPT P +YSP+SP YSPTSP Y
Sbjct: 1849 TSPDYSASSPTYSPTGPPSYSPTSPTYSPTSPEY 1882
Score = 58.9 bits (141), Expect = 2e-07
Identities = 43/90 (47%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSP-NLRLSPTNDAQFSPYVGGMAFSPTS------SPG 205
+P +P + T Y SP Y SP +L SP + Q+SP +SPTS SP
Sbjct: 1800 SPSHTPGASTRYSP--TSPKY--SPTSLSYSPASP-QYSP--SSSKYSPTSPTYTPTSPD 1852
Query: 206 YSPSSPGYSPSSP-GYSPTSPGYSPTSPGY 292
YS SSP YSP+ P YSPTSP YSPTSP Y
Sbjct: 1853 YSASSPTYSPTGPPSYSPTSPTYSPTSPEY 1882
[31][TOP]
>UniRef100_UPI0001796DD3 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase II subunit A) (DNA-directed RNA polymerase III
largest subunit) n=1 Tax=Equus caballus
RepID=UPI0001796DD3
Length = 1834
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1556 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1608
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1669 PSYSPTSP 1676
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1652
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1712 SYSPTSPSYSPTSP 1725
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1654 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1707
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1675 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1728
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1729 PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Score = 139 bits (351), Expect = 7e-32
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1682 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1735
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPTSP+Y+PTSP
Sbjct: 1736 PTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSP 1781
Score = 139 bits (351), Expect = 7e-32
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y+
Sbjct: 1703 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPNYT 1756
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPT+PSYSPTSP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPTSP 1802
Score = 139 bits (351), Expect = 7e-32
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1710 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPTSPNYTPTSPSYS 1763
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP YSP+SP YSPT+P+YSPTSPSYSPTSP
Sbjct: 1764 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTTPSYSPTSPSYSPTSP 1809
Score = 138 bits (348), Expect = 2e-31
Identities = 70/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1717 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PNYSPTSPNYTPTSPSYSPTSPSYS 1770
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP Y+PTSP YSPTSP+YSP++P YSPTSP+YSPTSP YSPTSP
Sbjct: 1771 PTSPNYTPTSPNYSPTSPSYSPTTPSYSPTSPSYSPTSPGYSPTSP 1816
Score = 127 bits (319), Expect = 4e-28
Identities = 64/103 (62%), Positives = 76/103 (73%), Gaps = 1/103 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ + N + SP ++PTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPTSPN-----YTPTS-PSYSPTSPSYSPTSPNYTPTSPNYS 1784
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPT+P YSPTSP+YSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1785 PTSPSYSPTTPSYSPTSPSYSPTSPGYSPTSPTYSLTSPAISP 1827
Score = 119 bits (298), Expect = 1e-25
Identities = 75/166 (45%), Positives = 92/166 (55%), Gaps = 38/166 (22%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
G+ FG P SP+ G TP++ G +P+Y SP+ + +P G FSP+
Sbjct: 1500 GMFFGSAP--SPMGGISPAMTPWNVGA-TPAYGA-----WSPSVGSGMTP--GAAGFSPS 1549
Query: 194 SSPGYSPSSPGYSPS-------------------------SPGYSPTSP--------GYS 274
++ S SPGYSP+ SP YSPTSP GY+
Sbjct: 1550 AASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYT 1609
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655
[32][TOP]
>UniRef100_UPI0000F2BF13 PREDICTED: similar to RNA polymerase II isoform 2 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF13
Length = 1932
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1518 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1570
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1571 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1630
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1631 PSYSPTSP 1638
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1560 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1614
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1615 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1673
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1674 SYSPTSPSYSPTSP 1687
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1616 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1669
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1670 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1715
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1637 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1690
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1691 PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1736
Score = 140 bits (354), Expect = 3e-32
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y+
Sbjct: 1665 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPNYT 1718
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1719 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1764
Score = 139 bits (350), Expect = 1e-31
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1672 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPTSPNYTPTSPSYS 1725
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1726 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1771
Score = 135 bits (341), Expect = 1e-30
Identities = 68/112 (60%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N SP ++SPTS SP Y+P+SP YSP+SP YSP
Sbjct: 1700 SPSYSPTSPNYSPTSPNYTPTSP-----SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 1754
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSP+SP Y+P SPTY+PSSP YSP+SP+YSPTSP Y+PTSP
Sbjct: 1755 TSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 1806
Score = 134 bits (338), Expect = 2e-30
Identities = 69/112 (61%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N + SP ++SPTS SP YSPSSP Y+P SP Y+P
Sbjct: 1728 SPSYSPTSPNYTPTSPNYSPTSP-----SYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTP 1782
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSP+SP YSPTSP Y+PTSP+YSPSSP Y+PTSP YSPTSP YSPTSP
Sbjct: 1783 SSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1834
Score = 133 bits (334), Expect = 7e-30
Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ + N + SP ++PTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1693 SPSYSPTSPSYSPTSPNYSPTSPN-----YTPTS-PSYSPTSPSYSPTSPNYTPTSPNYS 1746
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP Y+P SP Y+P+SPSYSP+SP
Sbjct: 1747 PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1792
Score = 132 bits (332), Expect = 1e-29
Identities = 68/110 (61%), Positives = 78/110 (70%), Gaps = 5/110 (4%)
Frame = +2
Query: 98 SPSYMLS-----PNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS 262
SPSY S P + +SP ++SPTS P Y+P+SP YSPSSP Y+PTS
Sbjct: 1763 SPSYSPSSPRYTPQSPTYTPSSPSYSP--SSPSYSPTS-PKYTPTSPSYSPSSPEYTPTS 1819
Query: 263 PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP YSPTSPTYSP++P YSPTSP YSPTSP Y+PTSP
Sbjct: 1820 PKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1869
Score = 132 bits (332), Expect = 1e-29
Identities = 69/105 (65%), Positives = 83/105 (79%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + SPT+ +++P ++SP SSP Y+P+SP YSP+SP YSPTSP YSP
Sbjct: 1784 SPSYSPS-SPSYSPTSP-KYTPT--SPSYSP-SSPEYTPTSPKYSPTSPKYSPTSPKYSP 1838
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 1839 TSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1883
Score = 131 bits (330), Expect = 2e-29
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + +PT+ + +SP ++PTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1791 SPSYSPTSP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSPKYSPTSPKYSPTSPTYS 1844
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PT+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1845 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSP 1890
Score = 129 bits (323), Expect = 1e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 1805 SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 1859
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1860 TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1907
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1819 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 1872
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1873 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1921
Score = 119 bits (297), Expect = 1e-25
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ +SP +SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1826 SPKYSPTSP--KYSPTSPT-YSPTTP--KYSPTS-PTYSPTSPVYTPTSPKYSPTSPTYS 1879
Query: 275 PTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1880 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1925
Score = 114 bits (284), Expect = 4e-24
Identities = 60/114 (52%), Positives = 68/114 (59%), Gaps = 33/114 (28%)
Frame = +2
Query: 170 GGMAFSPTSSPGYSPSSPGYSPS-------------------------SPGYSPTSP--- 265
G FSP+++ S SPGYSP+ SP YSPTSP
Sbjct: 1504 GAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYE 1563
Query: 266 -----GYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
GY+P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1564 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1617
Score = 67.8 bits (164), Expect = 4e-10
Identities = 47/133 (35%), Positives = 54/133 (40%), Gaps = 58/133 (43%)
Frame = +2
Query: 188 PTSSPGYSPSSPGYSPSSPGYSPTSPGYS------------------------------- 274
PT+ PG + G S +PG +
Sbjct: 1487 PTNIPGLGAA---------GRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSP 1537
Query: 275 -------------------PTSP--------GYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
PTSP GY+P SP YSPTSP+YSP+SP YSPTSP
Sbjct: 1538 GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPN 1597
Query: 374 YSPTSPSYSPTSP 412
YSPTSPSYSPTSP
Sbjct: 1598 YSPTSPSYSPTSP 1610
[33][TOP]
>UniRef100_UPI0000F2BF12 PREDICTED: similar to RNA polymerase II isoform 1 n=1 Tax=Monodelphis
domestica RepID=UPI0000F2BF12
Length = 1970
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1556 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1608
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1669 PSYSPTSP 1676
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1652
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1712 SYSPTSPSYSPTSP 1725
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1654 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1707
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1675 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1728
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1729 PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Score = 140 bits (354), Expect = 3e-32
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y+
Sbjct: 1703 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPNYT 1756
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1802
Score = 139 bits (350), Expect = 1e-31
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1710 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPTSPNYTPTSPSYS 1763
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1764 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1809
Score = 135 bits (341), Expect = 1e-30
Identities = 68/112 (60%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N SP ++SPTS SP Y+P+SP YSP+SP YSP
Sbjct: 1738 SPSYSPTSPNYSPTSPNYTPTSP-----SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 1792
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSP+SP Y+P SPTY+PSSP YSP+SP+YSPTSP Y+PTSP
Sbjct: 1793 TSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 1844
Score = 134 bits (338), Expect = 2e-30
Identities = 69/112 (61%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N + SP ++SPTS SP YSPSSP Y+P SP Y+P
Sbjct: 1766 SPSYSPTSPNYTPTSPNYSPTSP-----SYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTP 1820
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSP+SP YSPTSP Y+PTSP+YSPSSP Y+PTSP YSPTSP YSPTSP
Sbjct: 1821 SSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1872
Score = 133 bits (334), Expect = 7e-30
Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ + N + SP ++PTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPTSPN-----YTPTS-PSYSPTSPSYSPTSPNYTPTSPNYS 1784
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP Y+P SP Y+P+SPSYSP+SP
Sbjct: 1785 PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Score = 132 bits (332), Expect = 1e-29
Identities = 68/110 (61%), Positives = 78/110 (70%), Gaps = 5/110 (4%)
Frame = +2
Query: 98 SPSYMLS-----PNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS 262
SPSY S P + +SP ++SPTS P Y+P+SP YSPSSP Y+PTS
Sbjct: 1801 SPSYSPSSPRYTPQSPTYTPSSPSYSP--SSPSYSPTS-PKYTPTSPSYSPSSPEYTPTS 1857
Query: 263 PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP YSPTSPTYSP++P YSPTSP YSPTSP Y+PTSP
Sbjct: 1858 PKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1907
Score = 132 bits (332), Expect = 1e-29
Identities = 69/105 (65%), Positives = 83/105 (79%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + SPT+ +++P ++SP SSP Y+P+SP YSP+SP YSPTSP YSP
Sbjct: 1822 SPSYSPS-SPSYSPTSP-KYTPT--SPSYSP-SSPEYTPTSPKYSPTSPKYSPTSPKYSP 1876
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 1877 TSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1921
Score = 131 bits (330), Expect = 2e-29
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + +PT+ + +SP ++PTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1829 SPSYSPTSP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSPKYSPTSPKYSPTSPTYS 1882
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PT+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1883 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSP 1928
Score = 129 bits (323), Expect = 1e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 1843 SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 1897
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1898 TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1945
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1857 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 1910
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1911 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1959
Score = 120 bits (302), Expect = 4e-26
Identities = 75/166 (45%), Positives = 93/166 (56%), Gaps = 38/166 (22%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
G+ FG P SP+ G TP+++G +P+Y SP+ + +P G FSP+
Sbjct: 1500 GMFFGSAP--SPMGGMSPAMTPWNQGA-TPAYGA-----WSPSVGSGMTP--GAAGFSPS 1549
Query: 194 SSPGYSPSSPGYSPS-------------------------SPGYSPTSP--------GYS 274
++ S SPGYSP+ SP YSPTSP GY+
Sbjct: 1550 AASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYT 1609
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655
Score = 119 bits (297), Expect = 1e-25
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ +SP +SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1864 SPKYSPTSP--KYSPTSPT-YSPTTP--KYSPTS-PTYSPTSPVYTPTSPKYSPTSPTYS 1917
Query: 275 PTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1918 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1963
[34][TOP]
>UniRef100_UPI0000EBDCD2 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide A, 220kDa
isoform 4 n=1 Tax=Bos taurus RepID=UPI0000EBDCD2
Length = 1970
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1556 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1608
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1669 PSYSPTSP 1676
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1652
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1712 SYSPTSPSYSPTSP 1725
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1654 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1707
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1675 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1728
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1729 PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Score = 140 bits (354), Expect = 3e-32
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y+
Sbjct: 1703 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPNYT 1756
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1802
Score = 139 bits (350), Expect = 1e-31
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1710 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPTSPNYTPTSPSYS 1763
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1764 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1809
Score = 135 bits (341), Expect = 1e-30
Identities = 68/112 (60%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N SP ++SPTS SP Y+P+SP YSP+SP YSP
Sbjct: 1738 SPSYSPTSPNYSPTSPNYTPTSP-----SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 1792
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSP+SP Y+P SPTY+PSSP YSP+SP+YSPTSP Y+PTSP
Sbjct: 1793 TSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 1844
Score = 134 bits (338), Expect = 2e-30
Identities = 69/112 (61%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N + SP ++SPTS SP YSPSSP Y+P SP Y+P
Sbjct: 1766 SPSYSPTSPNYTPTSPNYSPTSP-----SYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTP 1820
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSP+SP YSPTSP Y+PTSP+YSPSSP Y+PTSP YSPTSP YSPTSP
Sbjct: 1821 SSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1872
Score = 133 bits (334), Expect = 7e-30
Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ + N + SP ++PTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPTSPN-----YTPTS-PSYSPTSPSYSPTSPNYTPTSPNYS 1784
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP Y+P SP Y+P+SPSYSP+SP
Sbjct: 1785 PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Score = 132 bits (332), Expect = 1e-29
Identities = 68/110 (61%), Positives = 78/110 (70%), Gaps = 5/110 (4%)
Frame = +2
Query: 98 SPSYMLS-----PNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS 262
SPSY S P + +SP ++SPTS P Y+P+SP YSPSSP Y+PTS
Sbjct: 1801 SPSYSPSSPRYTPQSPTYTPSSPSYSP--SSPSYSPTS-PKYTPTSPSYSPSSPEYTPTS 1857
Query: 263 PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP YSPTSPTYSP++P YSPTSP YSPTSP Y+PTSP
Sbjct: 1858 PKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1907
Score = 132 bits (332), Expect = 1e-29
Identities = 69/105 (65%), Positives = 83/105 (79%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + SPT+ +++P ++SP SSP Y+P+SP YSP+SP YSPTSP YSP
Sbjct: 1822 SPSYSPS-SPSYSPTSP-KYTPT--SPSYSP-SSPEYTPTSPKYSPTSPKYSPTSPKYSP 1876
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 1877 TSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1921
Score = 131 bits (330), Expect = 2e-29
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + +PT+ + +SP ++PTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1829 SPSYSPTSP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSPKYSPTSPKYSPTSPTYS 1882
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PT+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1883 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSP 1928
Score = 129 bits (323), Expect = 1e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 1843 SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 1897
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1898 TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1945
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1857 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 1910
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1911 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1959
Score = 120 bits (302), Expect = 4e-26
Identities = 75/166 (45%), Positives = 93/166 (56%), Gaps = 38/166 (22%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
G+ FG P SP+ G TP+++G +P+Y SP+ + +P G FSP+
Sbjct: 1500 GMFFGSAP--SPMGGISPAMTPWNQGA-TPAYGA-----WSPSVGSGMTP--GAAGFSPS 1549
Query: 194 SSPGYSPSSPGYSPS-------------------------SPGYSPTSP--------GYS 274
++ S SPGYSP+ SP YSPTSP GY+
Sbjct: 1550 AASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYT 1609
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655
Score = 119 bits (297), Expect = 1e-25
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ +SP +SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1864 SPKYSPTSP--KYSPTSPT-YSPTTP--KYSPTS-PTYSPTSPVYTPTSPKYSPTSPTYS 1917
Query: 275 PTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1918 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1963
[35][TOP]
>UniRef100_UPI0000E24648 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Pan troglodytes RepID=UPI0000E24648
Length = 1913
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1556 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1608
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1669 PSYSPTSP 1676
Score = 147 bits (371), Expect = 4e-34
Identities = 81/133 (60%), Positives = 92/133 (69%), Gaps = 1/133 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1652
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 371 AYSPTSPSYSPTS 409
+YSPTSPSYSPTS
Sbjct: 1712 SYSPTSPSYSPTS 1724
Score = 133 bits (335), Expect = 5e-30
Identities = 76/135 (56%), Positives = 89/135 (65%), Gaps = 13/135 (9%)
Frame = +2
Query: 47 TPGRSPISGTPYH----EGMMSPSYM-LSPNLR-LSPTNDAQFSPYV-GGMAFSPTS--- 196
+P SP S + YH + SPSY SP+ SP Q Y ++SP+S
Sbjct: 1717 SPSYSPTSQS-YHPTVVDSSTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSY 1775
Query: 197 ---SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTS 367
SP Y+P+SP YSPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP++P YSPTS
Sbjct: 1776 SPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTS 1835
Query: 368 PAYSPTSPSYSPTSP 412
P YSPTSP Y+PTSP
Sbjct: 1836 PTYSPTSPVYTPTSP 1850
Score = 132 bits (332), Expect = 1e-29
Identities = 69/105 (65%), Positives = 83/105 (79%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + SPT+ +++P ++SP SSP Y+P+SP YSP+SP YSPTSP YSP
Sbjct: 1765 SPSYSPS-SPSYSPTSP-KYTPT--SPSYSP-SSPEYTPTSPKYSPTSPKYSPTSPKYSP 1819
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 1820 TSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1864
Score = 131 bits (330), Expect = 2e-29
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + +PT+ + +SP ++PTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1772 SPSYSPTSP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSPKYSPTSPKYSPTSPTYS 1825
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PT+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1826 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSP 1871
Score = 129 bits (323), Expect = 1e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 1786 SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 1840
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1841 TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1888
Score = 125 bits (313), Expect = 2e-27
Identities = 68/112 (60%), Positives = 81/112 (72%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1654 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1707
Query: 275 PTSPGYSPTSPGYSPTSPTYSP------SSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTS +Y P +SP YSPTSP+YSP+SP Y+P SP
Sbjct: 1708 PTSPSYSPTSPSYSPTSQSYHPTVVDSSTSPSYSPTSPSYSPSSPRYTPQSP 1759
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1800 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 1853
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1854 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1902
Score = 120 bits (302), Expect = 4e-26
Identities = 75/166 (45%), Positives = 93/166 (56%), Gaps = 38/166 (22%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
G+ FG P SP+ G TP+++G +P+Y SP+ + +P G FSP+
Sbjct: 1500 GMFFGSAP--SPMGGISPAMTPWNQGA-TPAYGA-----WSPSVGSGMTP--GAAGFSPS 1549
Query: 194 SSPGYSPSSPGYSPS-------------------------SPGYSPTSP--------GYS 274
++ S SPGYSP+ SP YSPTSP GY+
Sbjct: 1550 AASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYT 1609
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655
Score = 119 bits (297), Expect = 1e-25
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ +SP +SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1807 SPKYSPTSP--KYSPTSPT-YSPTTP--KYSPTS-PTYSPTSPVYTPTSPKYSPTSPTYS 1860
Query: 275 PTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1861 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1906
[36][TOP]
>UniRef100_UPI00005A0B2C PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 23 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2C
Length = 1888
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1555 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1607
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1608 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1667
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1668 PSYSPTSP 1675
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1597 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1651
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1652 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1710
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1711 SYSPTSPSYSPTSP 1724
Score = 140 bits (354), Expect = 3e-32
Identities = 72/106 (67%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1653 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1706
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSP+SP
Sbjct: 1707 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSP 1752
Score = 136 bits (343), Expect = 6e-31
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SPN S +++P ++SP SSP Y+P+SP YSP+SP YSPTSP YS
Sbjct: 1737 SPSYSPTSPNYSPSSPTSPKYTPT--SPSYSP-SSPEYTPTSPKYSPTSPKYSPTSPKYS 1793
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 1794 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1839
Score = 135 bits (339), Expect = 2e-30
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP + S +SP Y+P+SP YSPSSP Y+PTSP YS
Sbjct: 1723 SPSYSPTSPSY--SPTSPS-YSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYS 1779
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP++P YSPTSP YSPTSP Y+PTSP
Sbjct: 1780 PTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1825
Score = 134 bits (338), Expect = 2e-30
Identities = 72/109 (66%), Positives = 84/109 (77%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1667 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1720
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGY---SPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP Y SPTSP Y+PTSPSYSP+SP
Sbjct: 1721 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSP 1769
Score = 134 bits (337), Expect = 3e-30
Identities = 72/109 (66%), Positives = 83/109 (76%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1660 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1713
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY---SPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP Y SPTSP Y+PTSP
Sbjct: 1714 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSP 1762
Score = 132 bits (333), Expect = 9e-30
Identities = 71/109 (65%), Positives = 83/109 (76%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1674 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1727
Query: 275 PTSPGYSPTSPGYSPTSPTYSPS---SPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS SP Y+PTSP+YSP+SP Y+PTSP
Sbjct: 1728 PTSPSYSPTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSP 1776
Score = 132 bits (333), Expect = 9e-30
Identities = 72/123 (58%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S SP Y SP+ S SP +SPTS P YSP+SP
Sbjct: 1737 SPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSP-----KYSPTS-PKYSPTSP 1790
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPT+P YSPTSP YSPTSP Y+PTSP YSP+SP YSPTSP YSPTSP+YSP
Sbjct: 1791 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1850
Query: 404 TSP 412
TSP
Sbjct: 1851 TSP 1853
Score = 132 bits (333), Expect = 9e-30
Identities = 74/125 (59%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P SP S T SPSY SP+ ++SP +SPTS P YSP+SP
Sbjct: 1744 SPNYSPSSPTSPKYTPTSPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPT 1798
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SY 397
YSP++P YSPTSP YSPTSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +Y
Sbjct: 1799 YSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTY 1858
Query: 398 SPTSP 412
SPTSP
Sbjct: 1859 SPTSP 1863
Score = 132 bits (332), Expect = 1e-29
Identities = 73/116 (62%), Positives = 83/116 (71%), Gaps = 11/116 (9%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1681 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1734
Query: 275 PTSPGYSPTSPGYS----------PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YS PTSP+YSPSSP Y+PTSP YSPTSP YSPTSP
Sbjct: 1735 PTSPSYSPTSPNYSPSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1790
Score = 129 bits (325), Expect = 8e-29
Identities = 70/109 (64%), Positives = 82/109 (75%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY- 271
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y
Sbjct: 1695 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1748
Query: 272 --SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSP Y+PTSP YSP+SP Y+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1749 PSSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1797
Score = 107 bits (266), Expect = 5e-22
Identities = 64/119 (53%), Positives = 72/119 (60%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
TP S T SP Y SP ++SP +SPTS P Y+P+SP
Sbjct: 1772 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSPT--SPTYSPTS-PVYTPTSPK 1826
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP S TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1827 YSPTSPTYSPTSPKYSPTSPTYSPTSPKGS----TYSPTSPGYSPTSPTYSLTSPAISP 1881
Score = 106 bits (264), Expect = 9e-22
Identities = 71/187 (37%), Positives = 82/187 (43%), Gaps = 62/187 (33%)
Frame = +2
Query: 38 FGMT-PGRSPISGTPYHEGMM---SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
+GM P P G GM +PS M + ++P N Y +PG
Sbjct: 1482 YGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYDPDPGAGSGMTPG 1541
Query: 206 YS------------------------PSSPG----------------------------- 226
+ P SPG
Sbjct: 1542 AAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEP 1601
Query: 227 -----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
Y+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP
Sbjct: 1602 RSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 1661
Query: 392 SYSPTSP 412
SYSPTSP
Sbjct: 1662 SYSPTSP 1668
[37][TOP]
>UniRef100_UPI00005A0B29 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 20 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B29
Length = 1891
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1524 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1576
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1577 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1636
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1637 PSYSPTSP 1644
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1566 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1620
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1621 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1679
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1680 SYSPTSPSYSPTSP 1693
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1643 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1696
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1697 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1742
Score = 137 bits (346), Expect = 3e-31
Identities = 73/123 (59%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
TP S T SP+Y +SPN +PT+ +++P ++SP SSP Y+P+SP
Sbjct: 1724 TPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSP-KYTPT--SPSYSP-SSPEYTPTSP 1779
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSP
Sbjct: 1780 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1839
Query: 404 TSP 412
TSP
Sbjct: 1840 TSP 1842
Score = 134 bits (336), Expect = 4e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1650 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1703
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP+Y+P SP
Sbjct: 1704 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1749
Score = 132 bits (333), Expect = 9e-30
Identities = 74/126 (58%), Positives = 87/126 (69%), Gaps = 3/126 (2%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
M+P SP +P + SPSY SP+ ++SP +SPTS P YSP+SP
Sbjct: 1747 MSPNYSPTPTSPKYTPT-SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSP 1800
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---S 394
YSP++P YSPTSP YSPTSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +
Sbjct: 1801 TYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST 1860
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1861 YSPTSP 1866
Score = 129 bits (323), Expect = 1e-28
Identities = 66/104 (63%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1657 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1710
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
PTSP YSP+ P Y+PTSP+YSP+SP YSPTSP Y+P SP+YSPT
Sbjct: 1711 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1754
Score = 128 bits (321), Expect = 2e-28
Identities = 68/108 (62%), Positives = 81/108 (75%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSP+ P Y+
Sbjct: 1671 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPSRPNYT 1724
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYS--PTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P SP YS PTSP Y+PTSPSYSP+SP
Sbjct: 1725 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSP 1772
Score = 126 bits (317), Expect = 7e-28
Identities = 67/108 (62%), Positives = 81/108 (75%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1664 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1717
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS--PTSPSYSPTSP 412
P+ P Y+PTSP YSPTSP+YSP+SP Y+P SP YS PTSP Y+PTSP
Sbjct: 1718 PSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSP 1765
Score = 107 bits (266), Expect = 5e-22
Identities = 64/119 (53%), Positives = 72/119 (60%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
TP S T SP Y SP ++SP +SPTS P Y+P+SP
Sbjct: 1775 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSPT--SPTYSPTS-PVYTPTSPK 1829
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP S TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1830 YSPTSPTYSPTSPKYSPTSPTYSPTSPKGS----TYSPTSPGYSPTSPTYSLTSPAISP 1884
Score = 106 bits (264), Expect = 9e-22
Identities = 71/187 (37%), Positives = 82/187 (43%), Gaps = 62/187 (33%)
Frame = +2
Query: 38 FGMT-PGRSPISGTPYHEGMM---SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
+GM P P G GM +PS M + ++P N Y +PG
Sbjct: 1451 YGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYDPDPGAGSGMTPG 1510
Query: 206 YS------------------------PSSPG----------------------------- 226
+ P SPG
Sbjct: 1511 AAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEP 1570
Query: 227 -----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
Y+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP
Sbjct: 1571 RSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 1630
Query: 392 SYSPTSP 412
SYSPTSP
Sbjct: 1631 SYSPTSP 1637
[38][TOP]
>UniRef100_UPI00005A0B28 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 19 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B28
Length = 1908
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1541 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1593
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1594 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1653
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1654 PSYSPTSP 1661
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1583 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1637
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1638 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1696
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1697 SYSPTSPSYSPTSP 1710
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1660 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1713
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1714 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1759
Score = 137 bits (346), Expect = 3e-31
Identities = 73/123 (59%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
TP S T SP+Y +SPN +PT+ +++P ++SP SSP Y+P+SP
Sbjct: 1741 TPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSP-KYTPT--SPSYSP-SSPEYTPTSP 1796
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSP
Sbjct: 1797 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1856
Query: 404 TSP 412
TSP
Sbjct: 1857 TSP 1859
Score = 134 bits (336), Expect = 4e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1667 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1720
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP+Y+P SP
Sbjct: 1721 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1766
Score = 132 bits (333), Expect = 9e-30
Identities = 74/126 (58%), Positives = 87/126 (69%), Gaps = 3/126 (2%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
M+P SP +P + SPSY SP+ ++SP +SPTS P YSP+SP
Sbjct: 1764 MSPNYSPTPTSPKYTPT-SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSP 1817
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---S 394
YSP++P YSPTSP YSPTSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +
Sbjct: 1818 TYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST 1877
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1878 YSPTSP 1883
Score = 129 bits (323), Expect = 1e-28
Identities = 66/104 (63%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1674 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1727
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
PTSP YSP+ P Y+PTSP+YSP+SP YSPTSP Y+P SP+YSPT
Sbjct: 1728 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1771
Score = 128 bits (321), Expect = 2e-28
Identities = 68/108 (62%), Positives = 81/108 (75%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSP+ P Y+
Sbjct: 1688 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPSRPNYT 1741
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYS--PTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P SP YS PTSP Y+PTSPSYSP+SP
Sbjct: 1742 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSP 1789
Score = 126 bits (317), Expect = 7e-28
Identities = 67/108 (62%), Positives = 81/108 (75%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1681 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1734
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS--PTSPSYSPTSP 412
P+ P Y+PTSP YSPTSP+YSP+SP Y+P SP YS PTSP Y+PTSP
Sbjct: 1735 PSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSP 1782
Score = 107 bits (266), Expect = 5e-22
Identities = 64/119 (53%), Positives = 72/119 (60%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
TP S T SP Y SP ++SP +SPTS P Y+P+SP
Sbjct: 1792 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSPT--SPTYSPTS-PVYTPTSPK 1846
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP S TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1847 YSPTSPTYSPTSPKYSPTSPTYSPTSPKGS----TYSPTSPGYSPTSPTYSLTSPAISP 1901
Score = 106 bits (264), Expect = 9e-22
Identities = 71/187 (37%), Positives = 82/187 (43%), Gaps = 62/187 (33%)
Frame = +2
Query: 38 FGMT-PGRSPISGTPYHEGMM---SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
+GM P P G GM +PS M + ++P N Y +PG
Sbjct: 1468 YGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYDPDPGAGSGMTPG 1527
Query: 206 YS------------------------PSSPG----------------------------- 226
+ P SPG
Sbjct: 1528 AAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEP 1587
Query: 227 -----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
Y+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP
Sbjct: 1588 RSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 1647
Query: 392 SYSPTSP 412
SYSPTSP
Sbjct: 1648 SYSPTSP 1654
[39][TOP]
>UniRef100_UPI00005A0B24 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 15 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B24
Length = 1924
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1557 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1609
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1610 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1669
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1670 PSYSPTSP 1677
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1599 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1653
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1654 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1712
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1713 SYSPTSPSYSPTSP 1726
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1676 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1729
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1730 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1775
Score = 137 bits (346), Expect = 3e-31
Identities = 73/123 (59%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
TP S T SP+Y +SPN +PT+ +++P ++SP SSP Y+P+SP
Sbjct: 1757 TPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSP-KYTPT--SPSYSP-SSPEYTPTSP 1812
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSP
Sbjct: 1813 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1872
Query: 404 TSP 412
TSP
Sbjct: 1873 TSP 1875
Score = 134 bits (336), Expect = 4e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1683 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1736
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP+Y+P SP
Sbjct: 1737 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1782
Score = 132 bits (333), Expect = 9e-30
Identities = 74/126 (58%), Positives = 87/126 (69%), Gaps = 3/126 (2%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
M+P SP +P + SPSY SP+ ++SP +SPTS P YSP+SP
Sbjct: 1780 MSPNYSPTPTSPKYTPT-SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSP 1833
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---S 394
YSP++P YSPTSP YSPTSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +
Sbjct: 1834 TYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST 1893
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1894 YSPTSP 1899
Score = 129 bits (323), Expect = 1e-28
Identities = 66/104 (63%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1690 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1743
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
PTSP YSP+ P Y+PTSP+YSP+SP YSPTSP Y+P SP+YSPT
Sbjct: 1744 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1787
Score = 128 bits (321), Expect = 2e-28
Identities = 68/108 (62%), Positives = 81/108 (75%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSP+ P Y+
Sbjct: 1704 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPSRPNYT 1757
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYS--PTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P SP YS PTSP Y+PTSPSYSP+SP
Sbjct: 1758 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSP 1805
Score = 126 bits (317), Expect = 7e-28
Identities = 67/108 (62%), Positives = 81/108 (75%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1697 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1750
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS--PTSPSYSPTSP 412
P+ P Y+PTSP YSPTSP+YSP+SP Y+P SP YS PTSP Y+PTSP
Sbjct: 1751 PSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSP 1798
Score = 107 bits (266), Expect = 5e-22
Identities = 64/119 (53%), Positives = 72/119 (60%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
TP S T SP Y SP ++SP +SPTS P Y+P+SP
Sbjct: 1808 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSPT--SPTYSPTS-PVYTPTSPK 1862
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP S TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1863 YSPTSPTYSPTSPKYSPTSPTYSPTSPKGS----TYSPTSPGYSPTSPTYSLTSPAISP 1917
Score = 106 bits (264), Expect = 9e-22
Identities = 71/187 (37%), Positives = 82/187 (43%), Gaps = 62/187 (33%)
Frame = +2
Query: 38 FGMT-PGRSPISGTPYHEGMM---SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
+GM P P G GM +PS M + ++P N Y +PG
Sbjct: 1484 YGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYDPDPGAGSGMTPG 1543
Query: 206 YS------------------------PSSPG----------------------------- 226
+ P SPG
Sbjct: 1544 AAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEP 1603
Query: 227 -----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
Y+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP
Sbjct: 1604 RSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 1663
Query: 392 SYSPTSP 412
SYSPTSP
Sbjct: 1664 SYSPTSP 1670
[40][TOP]
>UniRef100_UPI00005A0B21 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 12 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B21
Length = 1922
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1555 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1607
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1608 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1667
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1668 PSYSPTSP 1675
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1597 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1651
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1652 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1710
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1711 SYSPTSPSYSPTSP 1724
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1674 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1727
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1728 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1773
Score = 137 bits (346), Expect = 3e-31
Identities = 73/123 (59%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
TP S T SP+Y +SPN +PT+ +++P ++SP SSP Y+P+SP
Sbjct: 1755 TPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSP-KYTPT--SPSYSP-SSPEYTPTSP 1810
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSP
Sbjct: 1811 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1870
Query: 404 TSP 412
TSP
Sbjct: 1871 TSP 1873
Score = 134 bits (336), Expect = 4e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1681 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1734
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP+Y+P SP
Sbjct: 1735 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1780
Score = 132 bits (333), Expect = 9e-30
Identities = 74/126 (58%), Positives = 87/126 (69%), Gaps = 3/126 (2%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
M+P SP +P + SPSY SP+ ++SP +SPTS P YSP+SP
Sbjct: 1778 MSPNYSPTPTSPKYTPT-SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSP 1831
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---S 394
YSP++P YSPTSP YSPTSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +
Sbjct: 1832 TYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST 1891
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1892 YSPTSP 1897
Score = 129 bits (323), Expect = 1e-28
Identities = 66/104 (63%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1688 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1741
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
PTSP YSP+ P Y+PTSP+YSP+SP YSPTSP Y+P SP+YSPT
Sbjct: 1742 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1785
Score = 128 bits (321), Expect = 2e-28
Identities = 68/108 (62%), Positives = 81/108 (75%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSP+ P Y+
Sbjct: 1702 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPSRPNYT 1755
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYS--PTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P SP YS PTSP Y+PTSPSYSP+SP
Sbjct: 1756 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSP 1803
Score = 126 bits (317), Expect = 7e-28
Identities = 67/108 (62%), Positives = 81/108 (75%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1695 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1748
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS--PTSPSYSPTSP 412
P+ P Y+PTSP YSPTSP+YSP+SP Y+P SP YS PTSP Y+PTSP
Sbjct: 1749 PSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSP 1796
Score = 107 bits (266), Expect = 5e-22
Identities = 64/119 (53%), Positives = 72/119 (60%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
TP S T SP Y SP ++SP +SPTS P Y+P+SP
Sbjct: 1806 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSPT--SPTYSPTS-PVYTPTSPK 1860
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP S TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1861 YSPTSPTYSPTSPKYSPTSPTYSPTSPKGS----TYSPTSPGYSPTSPTYSLTSPAISP 1915
Score = 106 bits (264), Expect = 9e-22
Identities = 71/187 (37%), Positives = 82/187 (43%), Gaps = 62/187 (33%)
Frame = +2
Query: 38 FGMT-PGRSPISGTPYHEGMM---SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
+GM P P G GM +PS M + ++P N Y +PG
Sbjct: 1482 YGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYDPDPGAGSGMTPG 1541
Query: 206 YS------------------------PSSPG----------------------------- 226
+ P SPG
Sbjct: 1542 AAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEP 1601
Query: 227 -----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
Y+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP
Sbjct: 1602 RSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 1661
Query: 392 SYSPTSP 412
SYSPTSP
Sbjct: 1662 SYSPTSP 1668
[41][TOP]
>UniRef100_UPI00005A0B20 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 11 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B20
Length = 1923
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1556 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1608
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1669 PSYSPTSP 1676
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1652
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1712 SYSPTSPSYSPTSP 1725
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1675 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1728
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1729 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1774
Score = 137 bits (346), Expect = 3e-31
Identities = 73/123 (59%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
TP S T SP+Y +SPN +PT+ +++P ++SP SSP Y+P+SP
Sbjct: 1756 TPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSP-KYTPT--SPSYSP-SSPEYTPTSP 1811
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSP
Sbjct: 1812 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1871
Query: 404 TSP 412
TSP
Sbjct: 1872 TSP 1874
Score = 134 bits (336), Expect = 4e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1682 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1735
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP+Y+P SP
Sbjct: 1736 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1781
Score = 132 bits (333), Expect = 9e-30
Identities = 74/126 (58%), Positives = 87/126 (69%), Gaps = 3/126 (2%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
M+P SP +P + SPSY SP+ ++SP +SPTS P YSP+SP
Sbjct: 1779 MSPNYSPTPTSPKYTPT-SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSP 1832
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---S 394
YSP++P YSPTSP YSPTSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +
Sbjct: 1833 TYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST 1892
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1893 YSPTSP 1898
Score = 129 bits (323), Expect = 1e-28
Identities = 66/104 (63%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1689 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1742
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
PTSP YSP+ P Y+PTSP+YSP+SP YSPTSP Y+P SP+YSPT
Sbjct: 1743 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1786
Score = 128 bits (321), Expect = 2e-28
Identities = 68/108 (62%), Positives = 81/108 (75%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSP+ P Y+
Sbjct: 1703 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPSRPNYT 1756
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYS--PTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P SP YS PTSP Y+PTSPSYSP+SP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSP 1804
Score = 126 bits (317), Expect = 7e-28
Identities = 67/108 (62%), Positives = 81/108 (75%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1696 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1749
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS--PTSPSYSPTSP 412
P+ P Y+PTSP YSPTSP+YSP+SP Y+P SP YS PTSP Y+PTSP
Sbjct: 1750 PSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSP 1797
Score = 107 bits (266), Expect = 5e-22
Identities = 64/119 (53%), Positives = 72/119 (60%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
TP S T SP Y SP ++SP +SPTS P Y+P+SP
Sbjct: 1807 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSPT--SPTYSPTS-PVYTPTSPK 1861
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP S TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1862 YSPTSPTYSPTSPKYSPTSPTYSPTSPKGS----TYSPTSPGYSPTSPTYSLTSPAISP 1916
Score = 106 bits (264), Expect = 9e-22
Identities = 71/187 (37%), Positives = 82/187 (43%), Gaps = 62/187 (33%)
Frame = +2
Query: 38 FGMT-PGRSPISGTPYHEGMM---SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
+GM P P G GM +PS M + ++P N Y +PG
Sbjct: 1483 YGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYDPDPGAGSGMTPG 1542
Query: 206 YS------------------------PSSPG----------------------------- 226
+ P SPG
Sbjct: 1543 AAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEP 1602
Query: 227 -----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
Y+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP
Sbjct: 1603 RSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 1662
Query: 392 SYSPTSP 412
SYSPTSP
Sbjct: 1663 SYSPTSP 1669
[42][TOP]
>UniRef100_UPI00005A0B1C PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 8 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1C
Length = 1719
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1486 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1538
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1539 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1598
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1599 PSYSPTSP 1606
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1528 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1582
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1583 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1641
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1642 SYSPTSPSYSPTSP 1655
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1605 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1658
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1659 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1704
Score = 134 bits (336), Expect = 4e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1612 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1665
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP+Y+P SP
Sbjct: 1666 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1711
Score = 133 bits (334), Expect = 7e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1619 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1672
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSP+ P Y+PTSP+YSP+SP YSPTSP Y+P SP+YSPTSP
Sbjct: 1673 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1718
Score = 120 bits (300), Expect = 6e-26
Identities = 62/100 (62%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1626 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1679
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
P+ P Y+PTSP YSPTSP+YSP+SP Y+P SP YSPTSP+
Sbjct: 1680 PSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1719
Score = 111 bits (278), Expect = 2e-23
Identities = 59/108 (54%), Positives = 65/108 (60%), Gaps = 33/108 (30%)
Frame = +2
Query: 188 PTSSPGYSPSSPGYSPS-------------------------SPGYSPTSP--------G 268
PT+ P S SPGYSP+ SP YSPTSP G
Sbjct: 1478 PTNIPDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGG 1537
Query: 269 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
Y+P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1538 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1585
[43][TOP]
>UniRef100_UPI00005A0B1B PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 7 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1B
Length = 1858
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1486 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1538
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1539 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1598
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1599 PSYSPTSP 1606
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1528 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1582
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1583 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1641
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1642 SYSPTSPSYSPTSP 1655
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1605 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1658
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1659 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1704
Score = 134 bits (338), Expect = 2e-30
Identities = 75/129 (58%), Positives = 89/129 (68%), Gaps = 7/129 (5%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPG 205
TP S T SP+Y +SPN SPT+ + +SP ++PTS SP
Sbjct: 1686 TPTSPSYSPTSPSYSPTSPNYTPMSPNY--SPTSPS-YSPT--SPKYTPTSPSYSPSSPE 1740
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
Y+P+SP YSP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPT
Sbjct: 1741 YTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPT 1800
Query: 386 SPSYSPTSP 412
SP+YSPTSP
Sbjct: 1801 SPTYSPTSP 1809
Score = 134 bits (337), Expect = 3e-30
Identities = 69/106 (65%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1626 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1679
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+ P Y+PTSP YSPTSP+YSP+SP Y+P SP YSPTSPSYSPTSP
Sbjct: 1680 PSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSP 1725
Score = 134 bits (336), Expect = 4e-30
Identities = 68/106 (64%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSP+ P Y+
Sbjct: 1633 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPSRPNYT 1686
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P SP YSPTSP+YSPTSP Y+PTSP
Sbjct: 1687 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPSYSPTSPKYTPTSP 1732
Score = 132 bits (332), Expect = 1e-29
Identities = 69/106 (65%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ +SP ++PTS P YSP+SP YSP+SP Y+P SP YS
Sbjct: 1661 SPSYSPTSPSY--SPTSP-NYSP--SRPNYTPTS-PSYSPTSPSYSPTSPNYTPMSPNYS 1714
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP+YSPSSP Y+PTSP YSPTSP YSPTSP
Sbjct: 1715 PTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1760
Score = 131 bits (330), Expect = 2e-29
Identities = 73/124 (58%), Positives = 83/124 (66%), Gaps = 1/124 (0%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
M+P SP S + SP Y SP+ S SP +SPTS P YSP+S
Sbjct: 1709 MSPNYSPTSPS---YSPTSPKYTPTSPSYSPSSPEYTPTSP-----KYSPTS-PKYSPTS 1759
Query: 221 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 400
P YSP+SP YSPT+P YSPTSP YSPTSP Y+PTSP YSP+SP YSPTSP YSPTSP+YS
Sbjct: 1760 PKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYS 1819
Query: 401 PTSP 412
PTSP
Sbjct: 1820 PTSP 1823
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1745 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 1798
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1799 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1847
Score = 119 bits (297), Expect = 1e-25
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ +SP +SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1752 SPKYSPTSP--KYSPTSPT-YSPTTP--KYSPTS-PTYSPTSPVYTPTSPKYSPTSPTYS 1805
Query: 275 PTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1806 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1851
Score = 111 bits (278), Expect = 2e-23
Identities = 59/108 (54%), Positives = 65/108 (60%), Gaps = 33/108 (30%)
Frame = +2
Query: 188 PTSSPGYSPSSPGYSPS-------------------------SPGYSPTSP--------G 268
PT+ P S SPGYSP+ SP YSPTSP G
Sbjct: 1478 PTNIPDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGG 1537
Query: 269 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
Y+P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1538 YTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1585
[44][TOP]
>UniRef100_UPI00005A0B17 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B17
Length = 1788
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1555 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1607
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1608 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1667
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1668 PSYSPTSP 1675
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1597 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1651
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1652 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1710
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1711 SYSPTSPSYSPTSP 1724
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1674 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1727
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1728 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1773
Score = 134 bits (336), Expect = 4e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1681 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1734
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP+Y+P SP
Sbjct: 1735 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1780
Score = 133 bits (334), Expect = 7e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1688 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1741
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSP+ P Y+PTSP+YSP+SP YSPTSP Y+P SP+YSPTSP
Sbjct: 1742 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1787
Score = 120 bits (300), Expect = 6e-26
Identities = 62/100 (62%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1695 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1748
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
P+ P Y+PTSP YSPTSP+YSP+SP Y+P SP YSPTSP+
Sbjct: 1749 PSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1788
Score = 106 bits (264), Expect = 9e-22
Identities = 71/187 (37%), Positives = 82/187 (43%), Gaps = 62/187 (33%)
Frame = +2
Query: 38 FGMT-PGRSPISGTPYHEGMM---SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
+GM P P G GM +PS M + ++P N Y +PG
Sbjct: 1482 YGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYDPDPGAGSGMTPG 1541
Query: 206 YS------------------------PSSPG----------------------------- 226
+ P SPG
Sbjct: 1542 AAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEP 1601
Query: 227 -----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
Y+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP
Sbjct: 1602 RSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 1661
Query: 392 SYSPTSP 412
SYSPTSP
Sbjct: 1662 SYSPTSP 1668
[45][TOP]
>UniRef100_UPI00005A0B16 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B16
Length = 1922
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1555 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1607
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1608 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1667
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1668 PSYSPTSP 1675
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1597 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1651
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1652 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1710
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1711 SYSPTSPSYSPTSP 1724
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1674 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1727
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1728 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1773
Score = 137 bits (346), Expect = 3e-31
Identities = 73/123 (59%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
TP S T SP+Y +SPN +PT+ +++P ++SP SSP Y+P+SP
Sbjct: 1755 TPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSP-KYTPT--SPSYSP-SSPEYTPTSP 1810
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSP
Sbjct: 1811 KYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1870
Query: 404 TSP 412
TSP
Sbjct: 1871 TSP 1873
Score = 134 bits (336), Expect = 4e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1681 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1734
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP+Y+P SP
Sbjct: 1735 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1780
Score = 132 bits (333), Expect = 9e-30
Identities = 74/126 (58%), Positives = 87/126 (69%), Gaps = 3/126 (2%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
M+P SP +P + SPSY SP+ ++SP +SPTS P YSP+SP
Sbjct: 1778 MSPNYSPTPTSPKYTPT-SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSP 1831
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---S 394
YSP++P YSPTSP YSPTSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +
Sbjct: 1832 TYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGST 1891
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1892 YSPTSP 1897
Score = 129 bits (323), Expect = 1e-28
Identities = 66/104 (63%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1688 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1741
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
PTSP YSP+ P Y+PTSP+YSP+SP YSPTSP Y+P SP+YSPT
Sbjct: 1742 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1785
Score = 128 bits (321), Expect = 2e-28
Identities = 68/108 (62%), Positives = 81/108 (75%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSP+ P Y+
Sbjct: 1702 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPSRPNYT 1755
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYS--PTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P SP YS PTSP Y+PTSPSYSP+SP
Sbjct: 1756 PTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSPSYSPSSP 1803
Score = 126 bits (317), Expect = 7e-28
Identities = 67/108 (62%), Positives = 81/108 (75%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1695 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1748
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS--PTSPSYSPTSP 412
P+ P Y+PTSP YSPTSP+YSP+SP Y+P SP YS PTSP Y+PTSP
Sbjct: 1749 PSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPTSPKYTPTSP 1796
Score = 107 bits (266), Expect = 5e-22
Identities = 64/119 (53%), Positives = 72/119 (60%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
TP S T SP Y SP ++SP +SPTS P Y+P+SP
Sbjct: 1806 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSPT--SPTYSPTS-PVYTPTSPK 1860
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP S TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1861 YSPTSPTYSPTSPKYSPTSPTYSPTSPKGS----TYSPTSPGYSPTSPTYSLTSPAISP 1915
Score = 106 bits (264), Expect = 9e-22
Identities = 71/187 (37%), Positives = 82/187 (43%), Gaps = 62/187 (33%)
Frame = +2
Query: 38 FGMT-PGRSPISGTPYHEGMM---SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
+GM P P G GM +PS M + ++P N Y +PG
Sbjct: 1482 YGMEIPTNIPGLGAAGPTGMFFGSAPSPMGGISPAMTPWNQGATPAYDPDPGAGSGMTPG 1541
Query: 206 YS------------------------PSSPG----------------------------- 226
+ P SPG
Sbjct: 1542 AAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEP 1601
Query: 227 -----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
Y+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP
Sbjct: 1602 RSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSP 1661
Query: 392 SYSPTSP 412
SYSPTSP
Sbjct: 1662 SYSPTSP 1668
[46][TOP]
>UniRef100_UPI0001B7A25C UPI0001B7A25C related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25C
Length = 1968
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1558 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1610
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1611 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1670
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1671 PSYSPTSP 1678
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1600 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1654
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1655 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1713
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1714 SYSPTSPSYSPTSP 1727
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1656 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1709
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1710 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1755
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1677 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1730
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1731 PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1776
Score = 140 bits (354), Expect = 3e-32
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y+
Sbjct: 1705 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPNYT 1758
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1759 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1804
Score = 139 bits (350), Expect = 1e-31
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1712 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPTSPNYTPTSPSYS 1765
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1766 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1811
Score = 135 bits (341), Expect = 1e-30
Identities = 68/112 (60%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N SP ++SPTS SP Y+P+SP YSP+SP YSP
Sbjct: 1740 SPSYSPTSPNYSPTSPNYTPTSP-----SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 1794
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSP+SP Y+P SPTY+PSSP YSP+SP+YSPTSP Y+PTSP
Sbjct: 1795 TSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 1846
Score = 134 bits (338), Expect = 2e-30
Identities = 69/112 (61%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N + SP ++SPTS SP YSPSSP Y+P SP Y+P
Sbjct: 1768 SPSYSPTSPNYTPTSPNYSPTSP-----SYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTP 1822
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSP+SP YSPTSP Y+PTSP+YSPSSP Y+PTSP YSPTSP YSPTSP
Sbjct: 1823 SSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1874
Score = 133 bits (334), Expect = 7e-30
Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ + N + SP ++PTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1733 SPSYSPTSPSYSPTSPNYSPTSPN-----YTPTS-PSYSPTSPSYSPTSPNYTPTSPNYS 1786
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP Y+P SP Y+P+SPSYSP+SP
Sbjct: 1787 PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1832
Score = 132 bits (332), Expect = 1e-29
Identities = 68/110 (61%), Positives = 78/110 (70%), Gaps = 5/110 (4%)
Frame = +2
Query: 98 SPSYMLS-----PNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS 262
SPSY S P + +SP ++SPTS P Y+P+SP YSPSSP Y+PTS
Sbjct: 1803 SPSYSPSSPRYTPQSPTYTPSSPSYSP--SSPSYSPTS-PKYTPTSPSYSPSSPEYTPTS 1859
Query: 263 PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP YSPTSPTYSP++P YSPTSP YSPTSP Y+PTSP
Sbjct: 1860 PKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1909
Score = 132 bits (332), Expect = 1e-29
Identities = 69/105 (65%), Positives = 83/105 (79%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + SPT+ +++P ++SP SSP Y+P+SP YSP+SP YSPTSP YSP
Sbjct: 1824 SPSYSPS-SPSYSPTSP-KYTPT--SPSYSP-SSPEYTPTSPKYSPTSPKYSPTSPKYSP 1878
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 1879 TSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1923
Score = 131 bits (330), Expect = 2e-29
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + +PT+ + +SP ++PTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1831 SPSYSPTSP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSPKYSPTSPKYSPTSPTYS 1884
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PT+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1885 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSP 1930
Score = 129 bits (323), Expect = 1e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 1845 SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 1899
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1900 TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1947
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1859 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 1912
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1913 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1961
Score = 119 bits (299), Expect = 8e-26
Identities = 75/166 (45%), Positives = 92/166 (55%), Gaps = 38/166 (22%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
G+ FG P SP+ G TP+++G +P+Y SP+ +P G FSP+
Sbjct: 1502 GMFFGSAP--SPMGGISPAMTPWNQGA-TPAYGA-----WSPSVGDGMTP--GAAGFSPS 1551
Query: 194 SSPGYSPSSPGYSPS-------------------------SPGYSPTSP--------GYS 274
++ S SPGYSP+ SP YSPTSP GY+
Sbjct: 1552 AASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYT 1611
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1612 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1657
Score = 119 bits (297), Expect = 1e-25
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ +SP +SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1866 SPKYSPTSP--KYSPTSPT-YSPTTP--KYSPTS-PTYSPTSPVYTPTSPKYSPTSPTYS 1919
Query: 275 PTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1920 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1965
[47][TOP]
>UniRef100_UPI0001B7A25B UPI0001B7A25B related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0001B7A25B
Length = 1932
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1518 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1570
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1571 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1630
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1631 PSYSPTSP 1638
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1560 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1614
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1615 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1673
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1674 SYSPTSPSYSPTSP 1687
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1616 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1669
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1670 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1715
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1637 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1690
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1691 PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1736
Score = 140 bits (354), Expect = 3e-32
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y+
Sbjct: 1665 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPNYT 1718
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1719 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1764
Score = 139 bits (350), Expect = 1e-31
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1672 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPTSPNYTPTSPSYS 1725
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1726 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1771
Score = 135 bits (341), Expect = 1e-30
Identities = 68/112 (60%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N SP ++SPTS SP Y+P+SP YSP+SP YSP
Sbjct: 1700 SPSYSPTSPNYSPTSPNYTPTSP-----SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 1754
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSP+SP Y+P SPTY+PSSP YSP+SP+YSPTSP Y+PTSP
Sbjct: 1755 TSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 1806
Score = 134 bits (338), Expect = 2e-30
Identities = 69/112 (61%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N + SP ++SPTS SP YSPSSP Y+P SP Y+P
Sbjct: 1728 SPSYSPTSPNYTPTSPNYSPTSP-----SYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTP 1782
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSP+SP YSPTSP Y+PTSP+YSPSSP Y+PTSP YSPTSP YSPTSP
Sbjct: 1783 SSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1834
Score = 133 bits (334), Expect = 7e-30
Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ + N + SP ++PTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1693 SPSYSPTSPSYSPTSPNYSPTSPN-----YTPTS-PSYSPTSPSYSPTSPNYTPTSPNYS 1746
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP Y+P SP Y+P+SPSYSP+SP
Sbjct: 1747 PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1792
Score = 132 bits (332), Expect = 1e-29
Identities = 68/110 (61%), Positives = 78/110 (70%), Gaps = 5/110 (4%)
Frame = +2
Query: 98 SPSYMLS-----PNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS 262
SPSY S P + +SP ++SPTS P Y+P+SP YSPSSP Y+PTS
Sbjct: 1763 SPSYSPSSPRYTPQSPTYTPSSPSYSP--SSPSYSPTS-PKYTPTSPSYSPSSPEYTPTS 1819
Query: 263 PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP YSPTSPTYSP++P YSPTSP YSPTSP Y+PTSP
Sbjct: 1820 PKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1869
Score = 132 bits (332), Expect = 1e-29
Identities = 69/105 (65%), Positives = 83/105 (79%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + SPT+ +++P ++SP SSP Y+P+SP YSP+SP YSPTSP YSP
Sbjct: 1784 SPSYSPS-SPSYSPTSP-KYTPT--SPSYSP-SSPEYTPTSPKYSPTSPKYSPTSPKYSP 1838
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 1839 TSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1883
Score = 131 bits (330), Expect = 2e-29
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + +PT+ + +SP ++PTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1791 SPSYSPTSP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSPKYSPTSPKYSPTSPTYS 1844
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PT+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1845 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSP 1890
Score = 129 bits (323), Expect = 1e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 1805 SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 1859
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1860 TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1907
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1819 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 1872
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1873 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1921
Score = 119 bits (297), Expect = 1e-25
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ +SP +SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1826 SPKYSPTSP--KYSPTSPT-YSPTTP--KYSPTS-PTYSPTSPVYTPTSPKYSPTSPTYS 1879
Query: 275 PTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1880 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1925
Score = 114 bits (284), Expect = 4e-24
Identities = 60/114 (52%), Positives = 68/114 (59%), Gaps = 33/114 (28%)
Frame = +2
Query: 170 GGMAFSPTSSPGYSPSSPGYSPS-------------------------SPGYSPTSP--- 265
G FSP+++ S SPGYSP+ SP YSPTSP
Sbjct: 1504 GAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYE 1563
Query: 266 -----GYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
GY+P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1564 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1617
Score = 67.8 bits (164), Expect = 4e-10
Identities = 47/133 (35%), Positives = 54/133 (40%), Gaps = 58/133 (43%)
Frame = +2
Query: 188 PTSSPGYSPSSPGYSPSSPGYSPTSPGYS------------------------------- 274
PT+ PG + G S +PG +
Sbjct: 1487 PTNIPGLGAA---------GRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSP 1537
Query: 275 -------------------PTSP--------GYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
PTSP GY+P SP YSPTSP+YSP+SP YSPTSP
Sbjct: 1538 GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPN 1597
Query: 374 YSPTSPSYSPTSP 412
YSPTSPSYSPTSP
Sbjct: 1598 YSPTSPSYSPTSP 1610
[48][TOP]
>UniRef100_UPI0000DA33D8 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) n=1 Tax=Rattus norvegicus RepID=UPI0000DA33D8
Length = 1970
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1556 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1608
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1669 PSYSPTSP 1676
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1652
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1712 SYSPTSPSYSPTSP 1725
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1654 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1707
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1675 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1728
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1729 PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Score = 140 bits (354), Expect = 3e-32
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y+
Sbjct: 1703 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPNYT 1756
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1802
Score = 139 bits (350), Expect = 1e-31
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1710 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPTSPNYTPTSPSYS 1763
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1764 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1809
Score = 135 bits (341), Expect = 1e-30
Identities = 68/112 (60%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N SP ++SPTS SP Y+P+SP YSP+SP YSP
Sbjct: 1738 SPSYSPTSPNYSPTSPNYTPTSP-----SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 1792
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSP+SP Y+P SPTY+PSSP YSP+SP+YSPTSP Y+PTSP
Sbjct: 1793 TSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 1844
Score = 134 bits (338), Expect = 2e-30
Identities = 69/112 (61%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N + SP ++SPTS SP YSPSSP Y+P SP Y+P
Sbjct: 1766 SPSYSPTSPNYTPTSPNYSPTSP-----SYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTP 1820
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSP+SP YSPTSP Y+PTSP+YSPSSP Y+PTSP YSPTSP YSPTSP
Sbjct: 1821 SSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1872
Score = 133 bits (334), Expect = 7e-30
Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ + N + SP ++PTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPTSPN-----YTPTS-PSYSPTSPSYSPTSPNYTPTSPNYS 1784
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP Y+P SP Y+P+SPSYSP+SP
Sbjct: 1785 PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Score = 132 bits (332), Expect = 1e-29
Identities = 68/110 (61%), Positives = 78/110 (70%), Gaps = 5/110 (4%)
Frame = +2
Query: 98 SPSYMLS-----PNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS 262
SPSY S P + +SP ++SPTS P Y+P+SP YSPSSP Y+PTS
Sbjct: 1801 SPSYSPSSPRYTPQSPTYTPSSPSYSP--SSPSYSPTS-PKYTPTSPSYSPSSPEYTPTS 1857
Query: 263 PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP YSPTSPTYSP++P YSPTSP YSPTSP Y+PTSP
Sbjct: 1858 PKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1907
Score = 132 bits (332), Expect = 1e-29
Identities = 69/105 (65%), Positives = 83/105 (79%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + SPT+ +++P ++SP SSP Y+P+SP YSP+SP YSPTSP YSP
Sbjct: 1822 SPSYSPS-SPSYSPTSP-KYTPT--SPSYSP-SSPEYTPTSPKYSPTSPKYSPTSPKYSP 1876
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 1877 TSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1921
Score = 131 bits (330), Expect = 2e-29
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + +PT+ + +SP ++PTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1829 SPSYSPTSP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSPKYSPTSPKYSPTSPTYS 1882
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PT+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1883 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSP 1928
Score = 129 bits (323), Expect = 1e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 1843 SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 1897
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1898 TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1945
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1857 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 1910
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1911 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1959
Score = 120 bits (302), Expect = 4e-26
Identities = 75/166 (45%), Positives = 93/166 (56%), Gaps = 38/166 (22%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
G+ FG P SP+ G TP+++G +P+Y SP+ + +P G FSP+
Sbjct: 1500 GMFFGSAP--SPMGGISPAMTPWNQGA-TPAYGA-----WSPSVGSGMTP--GAAGFSPS 1549
Query: 194 SSPGYSPSSPGYSPS-------------------------SPGYSPTSP--------GYS 274
++ S SPGYSP+ SP YSPTSP GY+
Sbjct: 1550 AASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYT 1609
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655
Score = 119 bits (297), Expect = 1e-25
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ +SP +SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1864 SPKYSPTSP--KYSPTSPT-YSPTTP--KYSPTS-PTYSPTSPVYTPTSPKYSPTSPTYS 1917
Query: 275 PTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1918 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1963
[49][TOP]
>UniRef100_UPI0001951285 220 kDa DNA-directed RNA polymerase polypeptide A n=1 Tax=Canis lupus
familiaris RepID=UPI0001951285
Length = 1969
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1556 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1608
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1669 PSYSPTSP 1676
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1652
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1712 SYSPTSPSYSPTSP 1725
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1675 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1728
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1729 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1774
Score = 135 bits (341), Expect = 1e-30
Identities = 72/125 (57%), Positives = 82/125 (65%), Gaps = 3/125 (2%)
Frame = +2
Query: 47 TPGRSPISG--TPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
+P SP S TP MSP+Y SPN SP+ Y SP Y+PS
Sbjct: 1766 SPSYSPTSPNYTP-----MSPNYSPTSPNSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPS 1820
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSPSSP YSPTSP Y+PTSP YSP+SP Y+PTSP YSP+SP YSPTSP YSPTSP+Y
Sbjct: 1821 SPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTY 1880
Query: 398 SPTSP 412
SPT+P
Sbjct: 1881 SPTTP 1885
Score = 134 bits (337), Expect = 3e-30
Identities = 72/123 (58%), Positives = 82/123 (66%), Gaps = 5/123 (4%)
Frame = +2
Query: 59 SPISGTPYHEGMMSPSYMLS-----PNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
SP S T SPSY S P + +SP ++SPTS P Y+P+SP
Sbjct: 1787 SPNSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSP--SSPSYSPTS-PKYTPTSP 1843
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSPSSP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP++P YSPTSP YSPTSP Y+P
Sbjct: 1844 SYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTP 1903
Query: 404 TSP 412
TSP
Sbjct: 1904 TSP 1906
Score = 134 bits (336), Expect = 4e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1682 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1735
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP+Y+P SP
Sbjct: 1736 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1781
Score = 133 bits (334), Expect = 7e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1689 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1742
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSP+ P Y+PTSP+YSP+SP YSPTSP Y+P SP+YSPTSP
Sbjct: 1743 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1788
Score = 132 bits (332), Expect = 1e-29
Identities = 69/105 (65%), Positives = 83/105 (79%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + SPT+ +++P ++SP SSP Y+P+SP YSP+SP YSPTSP YSP
Sbjct: 1821 SPSYSPS-SPSYSPTSP-KYTPT--SPSYSP-SSPEYTPTSPKYSPTSPKYSPTSPKYSP 1875
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 1876 TSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1920
Score = 131 bits (330), Expect = 2e-29
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + +PT+ + +SP ++PTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1828 SPSYSPTSP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSPKYSPTSPKYSPTSPTYS 1881
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PT+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1882 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSP 1927
Score = 129 bits (323), Expect = 1e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 1842 SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 1896
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1897 TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1944
Score = 128 bits (321), Expect = 2e-28
Identities = 70/119 (58%), Positives = 84/119 (70%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1696 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1749
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGY-------------SPTSPAYSPTSPSYSPTSP 412
P+ P Y+PTSP YSPTSP+YSP+SP Y SPTSP+YSPTSPSYSP+SP
Sbjct: 1750 PSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPNSPTSPSYSPTSPSYSPSSP 1808
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1856 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 1909
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1910 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1958
Score = 122 bits (305), Expect = 2e-26
Identities = 65/120 (54%), Positives = 80/120 (66%), Gaps = 15/120 (12%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVG--GMAFSPTS------SPGYSPSSPG------YS 232
SPSY SPN S N SP ++SPTS SP YSP+SP YS
Sbjct: 1738 SPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPNSPTSPSYS 1797
Query: 233 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSP+SP Y+P SP Y+P+SP YSP+SP+YSP+SP Y+PTSP+YSP+SP Y+PTSP
Sbjct: 1798 PTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSP 1857
Score = 120 bits (302), Expect = 4e-26
Identities = 75/166 (45%), Positives = 93/166 (56%), Gaps = 38/166 (22%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
G+ FG P SP+ G TP+++G +P+Y SP+ + +P G FSP+
Sbjct: 1500 GMFFGSAP--SPMGGISPAMTPWNQGA-TPAYGA-----WSPSVGSGMTP--GAAGFSPS 1549
Query: 194 SSPGYSPSSPGYSPS-------------------------SPGYSPTSP--------GYS 274
++ S SPGYSP+ SP YSPTSP GY+
Sbjct: 1550 AASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYT 1609
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655
Score = 119 bits (297), Expect = 1e-25
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ +SP +SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1863 SPKYSPTSP--KYSPTSPT-YSPTTP--KYSPTS-PTYSPTSPVYTPTSPKYSPTSPTYS 1916
Query: 275 PTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1917 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1962
[50][TOP]
>UniRef100_O35559 DNA-directed RNA polymerase n=1 Tax=Cricetulus griseus
RepID=O35559_CRIGR
Length = 1970
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1556 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1608
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1669 PSYSPTSP 1676
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1652
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1712 SYSPTSPSYSPTSP 1725
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1654 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1707
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1675 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1728
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1729 PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Score = 140 bits (354), Expect = 3e-32
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y+
Sbjct: 1703 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPNYT 1756
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1802
Score = 139 bits (350), Expect = 1e-31
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1710 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPTSPNYTPTSPSYS 1763
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1764 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1809
Score = 135 bits (341), Expect = 1e-30
Identities = 68/112 (60%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N SP ++SPTS SP Y+P+SP YSP+SP YSP
Sbjct: 1738 SPSYSPTSPNYSPTSPNYTPTSP-----SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 1792
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSP+SP Y+P SPTY+PSSP YSP+SP+YSPTSP Y+PTSP
Sbjct: 1793 TSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 1844
Score = 134 bits (338), Expect = 2e-30
Identities = 69/112 (61%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N + SP ++SPTS SP YSPSSP Y+P SP Y+P
Sbjct: 1766 SPSYSPTSPNYTPTSPNYSPTSP-----SYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTP 1820
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSP+SP YSPTSP Y+PTSP+YSPSSP Y+PTSP YSPTSP YSPTSP
Sbjct: 1821 SSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1872
Score = 133 bits (334), Expect = 7e-30
Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ + N + SP ++PTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPTSPN-----YTPTS-PSYSPTSPSYSPTSPNYTPTSPNYS 1784
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP Y+P SP Y+P+SPSYSP+SP
Sbjct: 1785 PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Score = 132 bits (332), Expect = 1e-29
Identities = 68/110 (61%), Positives = 78/110 (70%), Gaps = 5/110 (4%)
Frame = +2
Query: 98 SPSYMLS-----PNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS 262
SPSY S P + +SP ++SPTS P Y+P+SP YSPSSP Y+PTS
Sbjct: 1801 SPSYSPSSPRYTPQSPTYTPSSPSYSP--SSPSYSPTS-PKYTPTSPSYSPSSPEYTPTS 1857
Query: 263 PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP YSPTSPTYSP++P YSPTSP YSPTSP Y+PTSP
Sbjct: 1858 PKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1907
Score = 132 bits (332), Expect = 1e-29
Identities = 69/105 (65%), Positives = 83/105 (79%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + SPT+ +++P ++SP SSP Y+P+SP YSP+SP YSPTSP YSP
Sbjct: 1822 SPSYSPS-SPSYSPTSP-KYTPT--SPSYSP-SSPEYTPTSPKYSPTSPKYSPTSPKYSP 1876
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 1877 TSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1921
Score = 131 bits (330), Expect = 2e-29
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + +PT+ + +SP ++PTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1829 SPSYSPTSP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSPKYSPTSPKYSPTSPTYS 1882
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PT+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1883 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSP 1928
Score = 129 bits (323), Expect = 1e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 1843 SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 1897
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1898 TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1945
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1857 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 1910
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1911 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1959
Score = 120 bits (302), Expect = 4e-26
Identities = 75/166 (45%), Positives = 93/166 (56%), Gaps = 38/166 (22%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
G+ FG P SP+ G TP+++G +P+Y SP+ + +P G FSP+
Sbjct: 1500 GMFFGSAP--SPMGGISPAMTPWNQGA-TPAYGA-----WSPSVGSGMTP--GAAGFSPS 1549
Query: 194 SSPGYSPSSPGYSPS-------------------------SPGYSPTSP--------GYS 274
++ S SPGYSP+ SP YSPTSP GY+
Sbjct: 1550 AASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYT 1609
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655
Score = 119 bits (297), Expect = 1e-25
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ +SP +SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1864 SPKYSPTSP--KYSPTSPT-YSPTTP--KYSPTS-PTYSPTSPVYTPTSPKYSPTSPTYS 1917
Query: 275 PTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1918 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1963
[51][TOP]
>UniRef100_O08847 DNA-directed RNA polymerase n=1 Tax=Mus musculus RepID=O08847_MOUSE
Length = 1966
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1556 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1608
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1669 PSYSPTSP 1676
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1652
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1712 SYSPTSPSYSPTSP 1725
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1654 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1707
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1675 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1728
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1729 PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Score = 140 bits (354), Expect = 3e-32
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y+
Sbjct: 1703 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPNYT 1756
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1802
Score = 139 bits (350), Expect = 1e-31
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1710 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPTSPNYTPTSPSYS 1763
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1764 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1809
Score = 135 bits (341), Expect = 1e-30
Identities = 68/112 (60%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N SP ++SPTS SP Y+P+SP YSP+SP YSP
Sbjct: 1738 SPSYSPTSPNYSPTSPNYTPTSP-----SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 1792
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSP+SP Y+P SPTY+PSSP YSP+SP+YSPTSP Y+PTSP
Sbjct: 1793 TSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 1844
Score = 133 bits (334), Expect = 7e-30
Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ + N + SP ++PTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPTSPN-----YTPTS-PSYSPTSPSYSPTSPNYTPTSPNYS 1784
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP Y+P SP Y+P+SPSYSP+SP
Sbjct: 1785 PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Score = 132 bits (333), Expect = 9e-30
Identities = 68/112 (60%), Positives = 79/112 (70%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N + SP ++SPTS SP YSPSSP Y+P SP Y+P
Sbjct: 1766 SPSYSPTSPNYTPTSPNYSPTSP-----SYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTP 1820
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSP+SP YSPTSP Y+PTSP+YSPSSP Y+P SP YSPTSP YSPTSP
Sbjct: 1821 SSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSP 1872
Score = 132 bits (332), Expect = 1e-29
Identities = 69/105 (65%), Positives = 83/105 (79%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + SPT+ +++P ++SP SSP Y+P+SP YSP+SP YSPTSP YSP
Sbjct: 1822 SPSYSPS-SPSYSPTSP-KYTPT--SPSYSP-SSPEYTPASPKYSPTSPKYSPTSPKYSP 1876
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 1877 TSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1921
Score = 130 bits (327), Expect = 5e-29
Identities = 67/110 (60%), Positives = 77/110 (70%), Gaps = 5/110 (4%)
Frame = +2
Query: 98 SPSYMLS-----PNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS 262
SPSY S P + +SP ++SPTS P Y+P+SP YSPSSP Y+P S
Sbjct: 1801 SPSYSPSSPRYTPQSPTYTPSSPSYSP--SSPSYSPTS-PKYTPTSPSYSPSSPEYTPAS 1857
Query: 263 PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP YSPTSPTYSP++P YSPTSP YSPTSP Y+PTSP
Sbjct: 1858 PKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1907
Score = 130 bits (326), Expect = 6e-29
Identities = 71/123 (57%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
TP S + SP Y SP+ S SP +SPTS P YSP+SP
Sbjct: 1819 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASP-----KYSPTS-PKYSPTSP 1872
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPT+P YSPTSP YSPTSP Y+PTSP YSP+SP YSPTSP YSPTSP+YSP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Query: 404 TSP 412
TSP
Sbjct: 1933 TSP 1935
Score = 128 bits (321), Expect = 2e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 1843 SPSY--SPSSPEYTPASPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 1897
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1898 TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1945
Score = 125 bits (314), Expect = 1e-27
Identities = 70/109 (64%), Positives = 80/109 (73%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPTS P YSP++P YSP+SP YSPTSP Y+
Sbjct: 1850 SPEYTPASP--KYSPTSP-KYSPT--SPKYSPTS-PTYSPTTPKYSPTSPTYSPTSPVYT 1903
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP---AYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1904 PTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP 1952
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1857 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 1910
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPG---YSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1911 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1959
Score = 120 bits (302), Expect = 4e-26
Identities = 75/166 (45%), Positives = 93/166 (56%), Gaps = 38/166 (22%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
G+ FG P SP+ G TP+++G +P+Y SP+ + +P G FSP+
Sbjct: 1500 GMFFGSAP--SPMGGISPAMTPWNQGA-TPAYGA-----WSPSVGSGMTP--GAAGFSPS 1549
Query: 194 SSPGYSPSSPGYSPS-------------------------SPGYSPTSP--------GYS 274
++ S SPGYSP+ SP YSPTSP GY+
Sbjct: 1550 AASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYT 1609
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655
Score = 116 bits (291), Expect = 7e-25
Identities = 69/121 (57%), Positives = 77/121 (63%), Gaps = 3/121 (2%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
TP S T SP Y SPT+ +SP +SPTS P YSP+SP
Sbjct: 1854 TPASPKYSPTSPKYSPTSPKY--------SPTSPT-YSPTTP--KYSPTS-PTYSPTSPV 1901
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSY 397
Y+P+SP YSPTSP YSPTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+
Sbjct: 1902 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1961
Query: 398 S 400
S
Sbjct: 1962 S 1962
[52][TOP]
>UniRef100_B4DET1 cDNA FLJ53860, highly similar to DNA-directed RNA polymerase II
largest subunit (EC 2.7.7.6) n=1 Tax=Homo sapiens
RepID=B4DET1_HUMAN
Length = 855
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 455 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 507
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 508 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 567
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 568 PSYSPTSP 575
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 497 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 551
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 552 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 610
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 611 SYSPTSPSYSPTSP 624
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 553 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 606
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 607 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 652
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 574 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 627
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP Y+PTSP+YSPTSPSYSPTSP
Sbjct: 628 PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 673
Score = 140 bits (354), Expect = 3e-32
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y+
Sbjct: 602 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPNYT 655
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 656 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 701
Score = 139 bits (350), Expect = 1e-31
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 609 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPTSPNYTPTSPSYS 662
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 663 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 708
Score = 135 bits (341), Expect = 1e-30
Identities = 68/112 (60%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N SP ++SPTS SP Y+P+SP YSP+SP YSP
Sbjct: 637 SPSYSPTSPNYSPTSPNYTPTSP-----SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 691
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSP+SP Y+P SPTY+PSSP YSP+SP+YSPTSP Y+PTSP
Sbjct: 692 TSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 743
Score = 134 bits (338), Expect = 2e-30
Identities = 73/125 (58%), Positives = 82/125 (65%), Gaps = 3/125 (2%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT---SSPGYSPS 217
TP S T SPSY SP + +++P SPT SSP YSPS
Sbjct: 676 TPTSPNYSPTSPSYSPTSPSY--SPTSPSYSPSSPRYTPQ------SPTYTPSSPSYSPS 727
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSP+SP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP++P YSPTSP YSPTSP Y
Sbjct: 728 SPSYSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVY 787
Query: 398 SPTSP 412
+PTSP
Sbjct: 788 TPTSP 792
Score = 133 bits (334), Expect = 7e-30
Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ + N + SP ++PTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 630 SPSYSPTSPSYSPTSPNYSPTSPN-----YTPTS-PSYSPTSPSYSPTSPNYTPTSPNYS 683
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP Y+P SP Y+P+SPSYSP+SP
Sbjct: 684 PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 729
Score = 130 bits (328), Expect = 3e-29
Identities = 66/105 (62%), Positives = 73/105 (69%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ SP Q Y SSP YSP+SP Y+P+SP YSPTSP YSP
Sbjct: 700 SPSY--SPS---SPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPKYSPTSPKYSP 754
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPT+P YSP+SP YSPTSP Y+PTSP YSPT P
Sbjct: 755 TSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTGP 799
Score = 129 bits (324), Expect = 1e-28
Identities = 68/105 (64%), Positives = 80/105 (76%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + SPT+ +++P +SPTS P YSP+SP YSP+SP YSPT+P YSP
Sbjct: 721 SPSYSPS-SPSYSPTSP-KYTPT--SPKYSPTS-PKYSPTSPKYSPTSPTYSPTTPKYSP 775
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP Y+PTSP YSP+ P YSPTSP YSPTSP+YSPTSP
Sbjct: 776 TSPTYSPTSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSPTSP 820
Score = 127 bits (319), Expect = 4e-28
Identities = 68/108 (62%), Positives = 77/108 (71%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 728 SPSY--SPTSPKYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 782
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPT PTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 783 TSPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 830
Score = 124 bits (310), Expect = 4e-27
Identities = 68/113 (60%), Positives = 79/113 (69%), Gaps = 8/113 (7%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSP--- 265
SPSY SPN + N + SP ++SPTS P YSP+SP YSPSSP Y+P SP
Sbjct: 665 SPSYSPTSPNYTPTSPNYSPTSP-----SYSPTS-PSYSPTSPSYSPSSPRYTPQSPTYT 718
Query: 266 ----GYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSPTSP Y+PTSP YSP+SP YSPTSP YSPTSP+YSPT+P
Sbjct: 719 PSSPSYSPSSPSYSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTTP 771
Score = 123 bits (308), Expect = 7e-27
Identities = 69/109 (63%), Positives = 80/109 (73%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 742 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 795
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PT P YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 796 PTGPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 844
Score = 120 bits (302), Expect = 4e-26
Identities = 75/166 (45%), Positives = 93/166 (56%), Gaps = 38/166 (22%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
G+ FG P SP+ G TP+++G +P+Y SP+ + +P G FSP+
Sbjct: 399 GMFFGSAP--SPMGGISPAMTPWNQGA-TPAYGA-----WSPSVGSGMTP--GAAGFSPS 448
Query: 194 SSPGYSPSSPGYSPS-------------------------SPGYSPTSP--------GYS 274
++ S SPGYSP+ SP YSPTSP GY+
Sbjct: 449 AASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYT 508
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 509 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 554
Score = 117 bits (294), Expect = 3e-25
Identities = 71/125 (56%), Positives = 81/125 (64%), Gaps = 6/125 (4%)
Frame = +2
Query: 47 TPGRSPISG--TPYHEGMMSPSYMLSPNL-RLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
+P SP S TP S SP + SPT+ +SP +SPTS P YSP+
Sbjct: 728 SPSYSPTSPKYTPTSPKYSPTSPKYSPTSPKYSPTSPT-YSPTTP--KYSPTS-PTYSPT 783
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTS 388
SP Y+P+SP YSPT P YSPTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TS
Sbjct: 784 SPVYTPTSPKYSPTGPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTS 843
Query: 389 PSYSP 403
P+ SP
Sbjct: 844 PAISP 848
[53][TOP]
>UniRef100_A6NN93 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=A6NN93_HUMAN
Length = 1970
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1556 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1608
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1669 PSYSPTSP 1676
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1652
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1712 SYSPTSPSYSPTSP 1725
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1654 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1707
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1675 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1728
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1729 PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Score = 140 bits (354), Expect = 3e-32
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y+
Sbjct: 1703 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPNYT 1756
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1802
Score = 139 bits (350), Expect = 1e-31
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1710 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPTSPNYTPTSPSYS 1763
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1764 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1809
Score = 134 bits (336), Expect = 4e-30
Identities = 67/112 (59%), Positives = 79/112 (70%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N SP ++SPTS SP Y+P+SP YSP+SP YSP
Sbjct: 1738 SPSYSPTSPNYSPTSPNYTPTSP-----SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 1792
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSP+SP Y+P SPTY+PSSP YSP+SP+YSP SP Y+PTSP
Sbjct: 1793 TSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSP 1844
Score = 133 bits (334), Expect = 7e-30
Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ + N + SP ++PTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPTSPN-----YTPTS-PSYSPTSPSYSPTSPNYTPTSPNYS 1784
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP Y+P SP Y+P+SPSYSP+SP
Sbjct: 1785 PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Score = 132 bits (333), Expect = 9e-30
Identities = 68/112 (60%), Positives = 79/112 (70%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N + SP ++SPTS SP YSPSSP Y+P SP Y+P
Sbjct: 1766 SPSYSPTSPNYTPTSPNYSPTSP-----SYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTP 1820
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSP+SP YSP SP Y+PTSP+YSPSSP Y+PTSP YSPTSP YSPTSP
Sbjct: 1821 SSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1872
Score = 132 bits (331), Expect = 2e-29
Identities = 70/112 (62%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYV-GGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SP+ SP Q Y ++SP+S SP Y+P+SP YSPSSP Y+P
Sbjct: 1801 SPSY--SPS---SPRYTPQSPTYTPSSPSYSPSSPSYSPASPKYTPTSPSYSPSSPEYTP 1855
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP YSPTSPTYSP++P YSPTSP YSPTSP Y+PTSP
Sbjct: 1856 TSPKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1907
Score = 131 bits (330), Expect = 2e-29
Identities = 67/105 (63%), Positives = 80/105 (76%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ +++P ++SP SSP Y+P+SP YSP+SP YSPTSP YSP
Sbjct: 1822 SPSY--SPSSPSYSPASPKYTPT--SPSYSP-SSPEYTPTSPKYSPTSPKYSPTSPKYSP 1876
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 1877 TSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1921
Score = 131 bits (330), Expect = 2e-29
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + +PT+ + +SP ++PTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1829 SPSYSPASP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSPKYSPTSPKYSPTSPTYS 1882
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PT+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1883 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSP 1928
Score = 129 bits (323), Expect = 1e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 1843 SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 1897
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1898 TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1945
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1857 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 1910
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1911 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1959
Score = 120 bits (302), Expect = 4e-26
Identities = 75/166 (45%), Positives = 93/166 (56%), Gaps = 38/166 (22%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
G+ FG P SP+ G TP+++G +P+Y SP+ + +P G FSP+
Sbjct: 1500 GMFFGSAP--SPMGGISPAMTPWNQGA-TPAYGA-----WSPSVGSGMTP--GAAGFSPS 1549
Query: 194 SSPGYSPSSPGYSPS-------------------------SPGYSPTSP--------GYS 274
++ S SPGYSP+ SP YSPTSP GY+
Sbjct: 1550 AASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYT 1609
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655
Score = 119 bits (297), Expect = 1e-25
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ +SP +SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1864 SPKYSPTSP--KYSPTSPT-YSPTTP--KYSPTS-PTYSPTSPVYTPTSPKYSPTSPTYS 1917
Query: 275 PTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1918 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1963
[54][TOP]
>UniRef100_P08775 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Mus musculus
RepID=RPB1_MOUSE
Length = 1970
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1556 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1608
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1669 PSYSPTSP 1676
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1652
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1712 SYSPTSPSYSPTSP 1725
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1654 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1707
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1675 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1728
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1729 PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Score = 140 bits (354), Expect = 3e-32
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y+
Sbjct: 1703 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPNYT 1756
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1802
Score = 139 bits (350), Expect = 1e-31
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1710 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPTSPNYTPTSPSYS 1763
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1764 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1809
Score = 135 bits (341), Expect = 1e-30
Identities = 68/112 (60%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N SP ++SPTS SP Y+P+SP YSP+SP YSP
Sbjct: 1738 SPSYSPTSPNYSPTSPNYTPTSP-----SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 1792
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSP+SP Y+P SPTY+PSSP YSP+SP+YSPTSP Y+PTSP
Sbjct: 1793 TSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 1844
Score = 133 bits (334), Expect = 7e-30
Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ + N + SP ++PTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPTSPN-----YTPTS-PSYSPTSPSYSPTSPNYTPTSPNYS 1784
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP Y+P SP Y+P+SPSYSP+SP
Sbjct: 1785 PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Score = 132 bits (333), Expect = 9e-30
Identities = 68/112 (60%), Positives = 79/112 (70%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N + SP ++SPTS SP YSPSSP Y+P SP Y+P
Sbjct: 1766 SPSYSPTSPNYTPTSPNYSPTSP-----SYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTP 1820
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSP+SP YSPTSP Y+PTSP+YSPSSP Y+P SP YSPTSP YSPTSP
Sbjct: 1821 SSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASPKYSPTSPKYSPTSP 1872
Score = 132 bits (332), Expect = 1e-29
Identities = 69/105 (65%), Positives = 83/105 (79%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + SPT+ +++P ++SP SSP Y+P+SP YSP+SP YSPTSP YSP
Sbjct: 1822 SPSYSPS-SPSYSPTSP-KYTPT--SPSYSP-SSPEYTPASPKYSPTSPKYSPTSPKYSP 1876
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 1877 TSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1921
Score = 130 bits (327), Expect = 5e-29
Identities = 67/110 (60%), Positives = 77/110 (70%), Gaps = 5/110 (4%)
Frame = +2
Query: 98 SPSYMLS-----PNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS 262
SPSY S P + +SP ++SPTS P Y+P+SP YSPSSP Y+P S
Sbjct: 1801 SPSYSPSSPRYTPQSPTYTPSSPSYSP--SSPSYSPTS-PKYTPTSPSYSPSSPEYTPAS 1857
Query: 263 PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP YSPTSPTYSP++P YSPTSP YSPTSP Y+PTSP
Sbjct: 1858 PKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1907
Score = 130 bits (326), Expect = 6e-29
Identities = 71/123 (57%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
TP S + SP Y SP+ S SP +SPTS P YSP+SP
Sbjct: 1819 TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPASP-----KYSPTS-PKYSPTSP 1872
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPT+P YSPTSP YSPTSP Y+PTSP YSP+SP YSPTSP YSPTSP+YSP
Sbjct: 1873 KYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 1932
Query: 404 TSP 412
TSP
Sbjct: 1933 TSP 1935
Score = 128 bits (321), Expect = 2e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 1843 SPSY--SPSSPEYTPASPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 1897
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1898 TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1945
Score = 125 bits (314), Expect = 1e-27
Identities = 70/109 (64%), Positives = 80/109 (73%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPTS P YSP++P YSP+SP YSPTSP Y+
Sbjct: 1850 SPEYTPASP--KYSPTSP-KYSPT--SPKYSPTS-PTYSPTTPKYSPTSPTYSPTSPVYT 1903
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP---AYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1904 PTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP 1952
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1857 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 1910
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPG---YSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1911 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1959
Score = 120 bits (302), Expect = 4e-26
Identities = 75/166 (45%), Positives = 93/166 (56%), Gaps = 38/166 (22%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
G+ FG P SP+ G TP+++G +P+Y SP+ + +P G FSP+
Sbjct: 1500 GMFFGSAP--SPMGGISPAMTPWNQGA-TPAYGA-----WSPSVGSGMTP--GAAGFSPS 1549
Query: 194 SSPGYSPSSPGYSPS-------------------------SPGYSPTSP--------GYS 274
++ S SPGYSP+ SP YSPTSP GY+
Sbjct: 1550 AASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYT 1609
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655
Score = 119 bits (298), Expect = 1e-25
Identities = 70/122 (57%), Positives = 78/122 (63%), Gaps = 3/122 (2%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
TP S T SP Y SPT+ +SP +SPTS P YSP+SP
Sbjct: 1854 TPASPKYSPTSPKYSPTSPKY--------SPTSPT-YSPTTP--KYSPTS-PTYSPTSPV 1901
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSY 397
Y+P+SP YSPTSP YSPTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+
Sbjct: 1902 YTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAI 1961
Query: 398 SP 403
SP
Sbjct: 1962 SP 1963
[55][TOP]
>UniRef100_P24928 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Euarchontoglires
RepID=RPB1_HUMAN
Length = 1970
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 1556 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 1608
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1609 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1668
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1669 PSYSPTSP 1676
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1598 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1652
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1653 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1712 SYSPTSPSYSPTSP 1725
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1654 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1707
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1708 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1753
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1675 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1728
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1729 PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1774
Score = 140 bits (354), Expect = 3e-32
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y+
Sbjct: 1703 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPNYT 1756
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1757 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1802
Score = 139 bits (350), Expect = 1e-31
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1710 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPTSPNYTPTSPSYS 1763
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1764 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1809
Score = 135 bits (341), Expect = 1e-30
Identities = 68/112 (60%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N SP ++SPTS SP Y+P+SP YSP+SP YSP
Sbjct: 1738 SPSYSPTSPNYSPTSPNYTPTSP-----SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 1792
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSP+SP Y+P SPTY+PSSP YSP+SP+YSPTSP Y+PTSP
Sbjct: 1793 TSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 1844
Score = 134 bits (338), Expect = 2e-30
Identities = 69/112 (61%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N + SP ++SPTS SP YSPSSP Y+P SP Y+P
Sbjct: 1766 SPSYSPTSPNYTPTSPNYSPTSP-----SYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTP 1820
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSP+SP YSPTSP Y+PTSP+YSPSSP Y+PTSP YSPTSP YSPTSP
Sbjct: 1821 SSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1872
Score = 133 bits (334), Expect = 7e-30
Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ + N + SP ++PTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1731 SPSYSPTSPSYSPTSPNYSPTSPN-----YTPTS-PSYSPTSPSYSPTSPNYTPTSPNYS 1784
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP Y+P SP Y+P+SPSYSP+SP
Sbjct: 1785 PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1830
Score = 132 bits (332), Expect = 1e-29
Identities = 68/110 (61%), Positives = 78/110 (70%), Gaps = 5/110 (4%)
Frame = +2
Query: 98 SPSYMLS-----PNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS 262
SPSY S P + +SP ++SPTS P Y+P+SP YSPSSP Y+PTS
Sbjct: 1801 SPSYSPSSPRYTPQSPTYTPSSPSYSP--SSPSYSPTS-PKYTPTSPSYSPSSPEYTPTS 1857
Query: 263 PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP YSPTSPTYSP++P YSPTSP YSPTSP Y+PTSP
Sbjct: 1858 PKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1907
Score = 132 bits (332), Expect = 1e-29
Identities = 69/105 (65%), Positives = 83/105 (79%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + SPT+ +++P ++SP SSP Y+P+SP YSP+SP YSPTSP YSP
Sbjct: 1822 SPSYSPS-SPSYSPTSP-KYTPT--SPSYSP-SSPEYTPTSPKYSPTSPKYSPTSPKYSP 1876
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 1877 TSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1921
Score = 131 bits (330), Expect = 2e-29
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + +PT+ + +SP ++PTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1829 SPSYSPTSP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSPKYSPTSPKYSPTSPTYS 1882
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PT+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1883 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSP 1928
Score = 129 bits (323), Expect = 1e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 1843 SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 1897
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1898 TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1945
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1857 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 1910
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1911 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1959
Score = 120 bits (302), Expect = 4e-26
Identities = 75/166 (45%), Positives = 93/166 (56%), Gaps = 38/166 (22%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
G+ FG P SP+ G TP+++G +P+Y SP+ + +P G FSP+
Sbjct: 1500 GMFFGSAP--SPMGGISPAMTPWNQGA-TPAYGA-----WSPSVGSGMTP--GAAGFSPS 1549
Query: 194 SSPGYSPSSPGYSPS-------------------------SPGYSPTSP--------GYS 274
++ S SPGYSP+ SP YSPTSP GY+
Sbjct: 1550 AASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYT 1609
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1610 PQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1655
Score = 119 bits (297), Expect = 1e-25
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ +SP +SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1864 SPKYSPTSP--KYSPTSPT-YSPTTP--KYSPTS-PTYSPTSPVYTPTSPKYSPTSPTYS 1917
Query: 275 PTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1918 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1963
[56][TOP]
>UniRef100_P11414 DNA-directed RNA polymerase II subunit RPB1 (Fragment) n=1
Tax=Cricetulus griseus RepID=RPB1_CRIGR
Length = 467
Score = 154 bits (389), Expect = 3e-36
Identities = 78/128 (60%), Positives = 90/128 (70%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SP A+ P S GY
Sbjct: 53 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS----YSPT--SPAYEPRSPGGY 105
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 106 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 165
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 166 PSYSPTSP 173
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 95 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 149
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 150 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 208
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 209 SYSPTSPSYSPTSP 222
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 151 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 204
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 205 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 250
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 172 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 225
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP Y+PTSP+YSPTSPSYSPTSP
Sbjct: 226 PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 271
Score = 140 bits (354), Expect = 3e-32
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y+
Sbjct: 200 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPNYT 253
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 254 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 299
Score = 139 bits (350), Expect = 1e-31
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 207 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPTSPNYTPTSPSYS 260
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 261 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 306
Score = 135 bits (341), Expect = 1e-30
Identities = 68/112 (60%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N SP ++SPTS SP Y+P+SP YSP+SP YSP
Sbjct: 235 SPSYSPTSPNYSPTSPNYTPTSP-----SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 289
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSP+SP Y+P SPTY+PSSP YSP+SP+YSPTSP Y+PTSP
Sbjct: 290 TSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 341
Score = 134 bits (338), Expect = 2e-30
Identities = 69/112 (61%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N + SP ++SPTS SP YSPSSP Y+P SP Y+P
Sbjct: 263 SPSYSPTSPNYTPTSPNYSPTSP-----SYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTP 317
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSP+SP YSPTSP Y+PTSP+YSPSSP Y+PTSP YSPTSP YSPTSP
Sbjct: 318 SSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 369
Score = 133 bits (334), Expect = 7e-30
Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ + N + SP ++PTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 228 SPSYSPTSPSYSPTSPNYSPTSPN-----YTPTS-PSYSPTSPSYSPTSPNYTPTSPNYS 281
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP Y+P SP Y+P+SPSYSP+SP
Sbjct: 282 PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 327
Score = 132 bits (332), Expect = 1e-29
Identities = 68/110 (61%), Positives = 78/110 (70%), Gaps = 5/110 (4%)
Frame = +2
Query: 98 SPSYMLS-----PNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS 262
SPSY S P + +SP ++SPTS P Y+P+SP YSPSSP Y+PTS
Sbjct: 298 SPSYSPSSPRYTPQSPTYTPSSPSYSP--SSPSYSPTS-PKYTPTSPSYSPSSPEYTPTS 354
Query: 263 PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP YSPTSPTYSP++P YSPTSP YSPTSP Y+PTSP
Sbjct: 355 PKYSPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 404
Score = 132 bits (332), Expect = 1e-29
Identities = 69/105 (65%), Positives = 83/105 (79%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + SPT+ +++P ++SP SSP Y+P+SP YSP+SP YSPTSP YSP
Sbjct: 319 SPSYSPS-SPSYSPTSP-KYTPT--SPSYSP-SSPEYTPTSPKYSPTSPKYSPTSPKYSP 373
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 374 TSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 418
Score = 131 bits (330), Expect = 2e-29
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + +PT+ + +SP ++PTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 326 SPSYSPTSP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSPKYSPTSPKYSPTSPTYS 379
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PT+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 380 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSP 425
Score = 129 bits (323), Expect = 1e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 340 SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 394
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 395 TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 442
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 354 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 407
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 408 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 456
Score = 119 bits (297), Expect = 1e-25
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ +SP +SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 361 SPKYSPTSP--KYSPTSPT-YSPTTP--KYSPTS-PTYSPTSPVYTPTSPKYSPTSPTYS 414
Query: 275 PTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 415 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 460
Score = 114 bits (284), Expect = 4e-24
Identities = 60/114 (52%), Positives = 68/114 (59%), Gaps = 33/114 (28%)
Frame = +2
Query: 170 GGMAFSPTSSPGYSPSSPGYSPS-------------------------SPGYSPTSP--- 265
G FSP+++ S SPGYSP+ SP YSPTSP
Sbjct: 39 GAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYE 98
Query: 266 -----GYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
GY+P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 99 PRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 152
Score = 67.8 bits (164), Expect = 4e-10
Identities = 47/133 (35%), Positives = 54/133 (40%), Gaps = 58/133 (43%)
Frame = +2
Query: 188 PTSSPGYSPSSPGYSPSSPGYSPTSPGYS------------------------------- 274
PT+ PG + G S +PG +
Sbjct: 22 PTNIPGLGAA---------GRSGMTPGAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSP 72
Query: 275 -------------------PTSP--------GYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
PTSP GY+P SP YSPTSP+YSP+SP YSPTSP
Sbjct: 73 GPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPN 132
Query: 374 YSPTSPSYSPTSP 412
YSPTSPSYSPTSP
Sbjct: 133 YSPTSPSYSPTSP 145
[57][TOP]
>UniRef100_UPI00005A0B2B PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 22 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2B
Length = 1892
Score = 154 bits (388), Expect = 4e-36
Identities = 82/134 (61%), Positives = 92/134 (68%), Gaps = 6/134 (4%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEG-MMSPSYMLSPNLRLSPTNDAQFSPYVGGM-----AFSP 190
G G +P SP G+P G MSPSY SPT+ A GG ++SP
Sbjct: 1551 GFSPGYSPAWSPTPGSPGSPGGAMSPSY--------SPTSPAYEPRSPGGYTPQSPSYSP 1602
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1603 TS-PSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1661
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1662 SYSPTSPSYSPTSP 1675
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1583 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1637
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1638 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1696
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1697 SYSPTSPSYSPTSP 1710
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1660 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1713
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1714 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1759
Score = 136 bits (343), Expect = 6e-31
Identities = 71/106 (66%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSPS P Y+PTSP YS
Sbjct: 1695 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPSRPNYTPTSPSYS 1748
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP+YSPSSP Y+PTSP YSPTSP YSPTSP
Sbjct: 1749 PTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1794
Score = 135 bits (341), Expect = 1e-30
Identities = 69/106 (65%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1667 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1720
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP Y+PTSP
Sbjct: 1721 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSP 1766
Score = 133 bits (334), Expect = 7e-30
Identities = 72/121 (59%), Positives = 81/121 (66%), Gaps = 16/121 (13%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVG--GMAFSPTS-------------SPGYSPSSPGY 229
SPSY SPN S N SP ++SPTS SP Y+P+SP Y
Sbjct: 1723 SPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY 1782
Query: 230 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
SP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTS
Sbjct: 1783 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1842
Query: 410 P 412
P
Sbjct: 1843 P 1843
Score = 132 bits (333), Expect = 9e-30
Identities = 72/123 (58%), Positives = 86/123 (69%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P R + T SPSY SP + +PT+ + +SP ++PTS P YSP+SP
Sbjct: 1734 SPSRPNYTPTSPSYSPTSPSYSPTSP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSP 1787
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPT+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSP
Sbjct: 1788 KYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSP 1847
Query: 404 TSP 412
TSP
Sbjct: 1848 TSP 1850
Score = 129 bits (323), Expect = 1e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 1765 SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 1819
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1820 TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1867
Score = 124 bits (312), Expect = 2e-27
Identities = 75/156 (48%), Positives = 93/156 (59%), Gaps = 28/156 (17%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
G+ FG P SP+ G TP+++G +P+Y SP+ + +P G FSP+
Sbjct: 1495 GMFFGSAP--SPMGGISPAMTPWNQGA-TPAYGA-----WSPSVGSGMTP--GAAGFSPS 1544
Query: 194 SSPGYSPSSPGYSPS---------------SPGYSPTSP--------GYSPTSPGYSPTS 304
++ S SPGYSP+ SP YSPTSP GY+P SP YSPTS
Sbjct: 1545 AASDASGFSPGYSPAWSPTPGSPGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTS 1604
Query: 305 PGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1605 PSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1640
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1779 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 1832
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1833 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1881
Score = 119 bits (297), Expect = 1e-25
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ +SP +SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1786 SPKYSPTSP--KYSPTSPT-YSPTTP--KYSPTS-PTYSPTSPVYTPTSPKYSPTSPTYS 1839
Query: 275 PTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1840 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1885
[58][TOP]
>UniRef100_UPI00005A0B2A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 21 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B2A
Length = 1896
Score = 154 bits (388), Expect = 4e-36
Identities = 82/134 (61%), Positives = 92/134 (68%), Gaps = 6/134 (4%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEG-MMSPSYMLSPNLRLSPTNDAQFSPYVGGM-----AFSP 190
G G +P SP G+P G MSPSY SPT+ A GG ++SP
Sbjct: 1555 GFSPGYSPAWSPTPGSPGSPGGAMSPSY--------SPTSPAYEPRSPGGYTPQSPSYSP 1606
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1607 TS-PSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1665
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1666 SYSPTSPSYSPTSP 1679
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1587 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1641
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1642 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1700
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1701 SYSPTSPSYSPTSP 1714
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1664 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1717
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1718 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1763
Score = 136 bits (343), Expect = 6e-31
Identities = 71/106 (66%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSPS P Y+PTSP YS
Sbjct: 1699 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPSRPNYTPTSPSYS 1752
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP+YSPSSP Y+PTSP YSPTSP YSPTSP
Sbjct: 1753 PTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSP 1798
Score = 135 bits (341), Expect = 1e-30
Identities = 69/106 (65%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1671 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1724
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP Y+PTSP
Sbjct: 1725 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSP 1770
Score = 133 bits (334), Expect = 7e-30
Identities = 72/121 (59%), Positives = 81/121 (66%), Gaps = 16/121 (13%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVG--GMAFSPTS-------------SPGYSPSSPGY 229
SPSY SPN S N SP ++SPTS SP Y+P+SP Y
Sbjct: 1727 SPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY 1786
Query: 230 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
SP+SP YSPTSP YSPTSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTS
Sbjct: 1787 SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS 1846
Query: 410 P 412
P
Sbjct: 1847 P 1847
Score = 132 bits (333), Expect = 9e-30
Identities = 72/123 (58%), Positives = 86/123 (69%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P R + T SPSY SP + +PT+ + +SP ++PTS P YSP+SP
Sbjct: 1738 SPSRPNYTPTSPSYSPTSPSYSPTSP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSP 1791
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPT+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSP
Sbjct: 1792 KYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSP 1851
Query: 404 TSP 412
TSP
Sbjct: 1852 TSP 1854
Score = 129 bits (323), Expect = 1e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 1769 SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 1823
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1824 TSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1871
Score = 125 bits (313), Expect = 2e-27
Identities = 73/156 (46%), Positives = 88/156 (56%), Gaps = 28/156 (17%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
G+ FG P SP+ G TP+++G SP ++P G FSP+
Sbjct: 1501 GMFFGSAP--SPMGGISPAMTPWNQGATPAYGAWSPRSGMTP----------GAAGFSPS 1548
Query: 194 SSPGYSPSSPGYSPS---------------SPGYSPTSP--------GYSPTSPGYSPTS 304
++ S SPGYSP+ SP YSPTSP GY+P SP YSPTS
Sbjct: 1549 AASDASGFSPGYSPAWSPTPGSPGSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTS 1608
Query: 305 PGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1609 PSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1644
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1783 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 1836
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1837 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1885
Score = 119 bits (297), Expect = 1e-25
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ +SP +SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1790 SPKYSPTSP--KYSPTSPT-YSPTTP--KYSPTS-PTYSPTSPVYTPTSPKYSPTSPTYS 1843
Query: 275 PTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 1844 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1889
[59][TOP]
>UniRef100_B7G9I2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G9I2_PHATR
Length = 1706
Score = 154 bits (388), Expect = 4e-36
Identities = 80/122 (65%), Positives = 90/122 (73%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P SP SG+ Y G S SY + SPT+ Q+SP A+SPTS P YSP+SP
Sbjct: 1490 SPAYSPDSGS-YGSGFASGSYGAGDSPAYSPTSP-QYSPT--SPAYSPTS-PAYSPTSPA 1544
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSP+YSPT
Sbjct: 1545 YSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1604
Query: 407 SP 412
SP
Sbjct: 1605 SP 1606
Score = 148 bits (374), Expect = 2e-34
Identities = 80/148 (54%), Positives = 87/148 (58%), Gaps = 22/148 (14%)
Frame = +2
Query: 35 DFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTND--AQFSPYVGGMAFSPT----- 193
D GM TPY + S M+ SP D A FSP VG +FSP
Sbjct: 1438 DLGMAGVGGVGGATPYATTPFAASPMVGDGAAASPFVDGGAAFSPAVGAASFSPAYSPDS 1497
Query: 194 ---------------SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP 328
SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP
Sbjct: 1498 GSYGSGFASGSYGAGDSPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1557
Query: 329 TYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 1558 AYSPTSPAYSPTSPAYSPTSPAYSPTSP 1585
Score = 143 bits (361), Expect = 5e-33
Identities = 75/106 (70%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1542 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 1595
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 1596 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1641
Score = 143 bits (361), Expect = 5e-33
Identities = 75/106 (70%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1549 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 1602
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 1603 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1648
Score = 143 bits (361), Expect = 5e-33
Identities = 75/106 (70%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1556 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 1609
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 1610 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1655
Score = 143 bits (361), Expect = 5e-33
Identities = 75/106 (70%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1563 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 1616
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 1617 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1662
Score = 143 bits (361), Expect = 5e-33
Identities = 75/106 (70%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1570 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 1623
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 1624 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1669
Score = 143 bits (361), Expect = 5e-33
Identities = 75/106 (70%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1577 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 1630
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 1631 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1676
Score = 143 bits (361), Expect = 5e-33
Identities = 75/106 (70%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1584 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 1637
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 1638 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1683
Score = 143 bits (361), Expect = 5e-33
Identities = 75/106 (70%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1591 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 1644
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 1645 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1690
Score = 137 bits (346), Expect = 3e-31
Identities = 72/104 (69%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1598 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 1651
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
PTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSP+YSP+
Sbjct: 1652 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPS 1695
[60][TOP]
>UniRef100_UPI0000D5670C PREDICTED: similar to GA13798-PA n=1 Tax=Tribolium castaneum
RepID=UPI0000D5670C
Length = 2007
Score = 152 bits (385), Expect = 9e-36
Identities = 83/130 (63%), Positives = 95/130 (73%), Gaps = 6/130 (4%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS------SP 202
GM+PG S TP M SP +M SP+ + SP+ +SP +F PTS SP
Sbjct: 1554 GMSPGYGAWSPTPQSPAM-SP-FMASPHGQ-SPS----YSP--SSPSFQPTSPSMTPVSP 1604
Query: 203 GYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 382
GYSP+SPGYSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSP
Sbjct: 1605 GYSPTSPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1664
Query: 383 TSPSYSPTSP 412
TSPSYSPTSP
Sbjct: 1665 TSPSYSPTSP 1674
Score = 146 bits (368), Expect = 8e-34
Identities = 80/128 (62%), Positives = 94/128 (73%), Gaps = 5/128 (3%)
Frame = +2
Query: 44 MTPGRSPISG----TPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
++PG SP S T + SPSY SP+ SPT+ + +SP ++SPTS P Y
Sbjct: 1602 VSPGYSPTSPGYSPTSPNYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSY 1655
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
SP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1656 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1715
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1716 PSYSPTSP 1723
Score = 145 bits (365), Expect = 2e-33
Identities = 82/136 (60%), Positives = 93/136 (68%), Gaps = 12/136 (8%)
Frame = +2
Query: 41 GMTPGRSPISG---------TPYHEGMM--SPSYM-LSPNLRLSPTNDAQFSPYVGGMAF 184
G +P SP S TP G SP Y SPN SPT+ + +SP ++
Sbjct: 1580 GQSPSYSPSSPSFQPTSPSMTPVSPGYSPTSPGYSPTSPNY--SPTSPS-YSPT--SPSY 1634
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SPTS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPT
Sbjct: 1635 SPTS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1693
Query: 365 SPAYSPTSPSYSPTSP 412
SP+YSPTSPSYSPTSP
Sbjct: 1694 SPSYSPTSPSYSPTSP 1709
Score = 144 bits (364), Expect = 2e-33
Identities = 81/133 (60%), Positives = 93/133 (69%), Gaps = 11/133 (8%)
Frame = +2
Query: 47 TPGRSPISG----TPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS----- 196
+PG SP S T SPSY SP+ SPT+ + +SP ++SPTS
Sbjct: 1610 SPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTSPSYSP 1664
Query: 197 -SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+
Sbjct: 1665 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1724
Query: 374 YSPTSPSYSPTSP 412
YSPTSPSYSPTSP
Sbjct: 1725 YSPTSPSYSPTSP 1737
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1645 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1698
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1699 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1744
Score = 139 bits (350), Expect = 1e-31
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1666 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1719
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP Y+P SP+YSPTSPSYSP+SP
Sbjct: 1720 PTSPSYSPTSPSYSPTSPSYSPSSPRYTPASPSYSPTSPSYSPSSP 1765
Score = 135 bits (339), Expect = 2e-30
Identities = 69/106 (65%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1673 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1726
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+SP Y+P+SP YSPTSP+YSP+SP YSP SP
Sbjct: 1727 PTSPSYSPTSPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSPASP 1772
Score = 133 bits (335), Expect = 5e-30
Identities = 79/164 (48%), Positives = 94/164 (57%), Gaps = 36/164 (21%)
Frame = +2
Query: 29 GLDFGM--TPGRSPISG-TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS- 196
G+ FG TP SP + TP+++G + Y+ S SP N GG AFSP++
Sbjct: 1495 GMFFGSAATPSMSPGAAMTPWNQG--ATPYVGSA---WSPHNLMGSGMTPGGPAFSPSAA 1549
Query: 197 --------------------------------SPGYSPSSPGYSPSSPGYSPTSPGYSPT 280
SP YSPSSP + P+SP +P SPGYSPT
Sbjct: 1550 SDASGMSPGYGAWSPTPQSPAMSPFMASPHGQSPSYSPSSPSFQPTSPSMTPVSPGYSPT 1609
Query: 281 SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPGYSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1610 SPGYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1653
Score = 132 bits (331), Expect = 2e-29
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1687 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1740
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP Y+P SP YSPTSP+YSPSSP YSP SP++SP+SP YSPTSP
Sbjct: 1741 PSSPRYTPASPSYSPTSPSYSPSSPQYSPASPSFSPSSPKYSPTSP 1786
Score = 132 bits (331), Expect = 2e-29
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSP+SP Y+
Sbjct: 1694 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPSSPRYT 1747
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSPTSP YSP+SP YSP+SP +SP+SP YSPTSPSYSPTSP
Sbjct: 1748 PASPSYSPTSPSYSPSSPQYSPASPSFSPSSPKYSPTSPSYSPTSP 1793
Score = 126 bits (316), Expect = 9e-28
Identities = 67/112 (59%), Positives = 83/112 (74%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SP+ SPT+ + +SP ++SP+S SP YSP+SP YSPSSP YSP
Sbjct: 1715 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPSSPRYTPASPSYSPTSPSYSPSSPQYSP 1769
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP +SP+SP YSPTSP YSPTSP+++ SP YSPTSP+YSPTSP+YSP+SP
Sbjct: 1770 ASPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSP 1821
Score = 123 bits (309), Expect = 6e-27
Identities = 70/127 (55%), Positives = 81/127 (63%), Gaps = 5/127 (3%)
Frame = +2
Query: 47 TPGRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+P SP S G+P + SPSY SPT+ +SP +P +S YS
Sbjct: 1785 SPSYSPTSPSFAGGSPQYSPT-SPSY--------SPTSP-NYSP--SSPQHTPAASSRYS 1832
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
PSSP YSPSSP YSPTSP YSP S YSPTSP Y+PTSP+YSP+SP YS P YSP+SP
Sbjct: 1833 PSSPNYSPSSPSYSPTSPQYSPHSTKYSPTSPTYTPTSPSYSPASPAYSSQPPRYSPSSP 1892
Query: 392 SYSPTSP 412
SYSPTSP
Sbjct: 1893 SYSPTSP 1899
Score = 119 bits (297), Expect = 1e-25
Identities = 65/120 (54%), Positives = 80/120 (66%), Gaps = 15/120 (12%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP + +++P ++SPTS P YSPSSP YSP+SP +SP+SP YSP
Sbjct: 1729 SPSY--SPTSPSYSPSSPRYTP--ASPSYSPTS-PSYSPSSPQYSPASPSFSPSSPKYSP 1783
Query: 278 TSPGYSPTSPG-------YSPTSPTYSPSSPGYSPTSP--------AYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP+YSP+SP YSP+SP YSP+SP+YSP+SP
Sbjct: 1784 TSPSYSPTSPSFAGGSPQYSPTSPSYSPTSPNYSPSSPQHTPAASSRYSPSSPNYSPSSP 1843
Score = 114 bits (285), Expect = 3e-24
Identities = 67/123 (54%), Positives = 74/123 (60%), Gaps = 18/123 (14%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG---YSPSSPGYSPSSPG------- 247
SPSY SP + Q+SP SP+ SP YSP+SP YSP+SP
Sbjct: 1750 SPSY--SPTSPSYSPSSPQYSPA------SPSFSPSSPKYSPTSPSYSPTSPSFAGGSPQ 1801
Query: 248 YSPTSPGYSPTSPGYSPTSP--------GYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSPTSP YSPTSP YSP+SP YSP+SP YSPSSP YSPTSP YSP S YSP
Sbjct: 1802 YSPTSPSYSPTSPNYSPSSPQHTPAASSRYSPSSPNYSPSSPSYSPTSPQYSPHSTKYSP 1861
Query: 404 TSP 412
TSP
Sbjct: 1862 TSP 1864
Score = 96.7 bits (239), Expect = 7e-19
Identities = 55/121 (45%), Positives = 74/121 (61%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P S T + SP + + + R SP++ +SP ++SPTS P YSP S
Sbjct: 1803 SPTSPSYSPTSPNYSPSSPQHTPAASSRYSPSSP-NYSP--SSPSYSPTS-PQYSPHSTK 1858
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
YSP+SP Y+PTSP YSP SP YS P YSP+SP+YSP+SP P SP YS +S +Y+ +
Sbjct: 1859 YSPTSPTYTPTSPSYSPASPAYSSQPPRYSPSSPSYSPTSPITLPPSPYYSRSSSTYTFS 1918
Query: 407 S 409
S
Sbjct: 1919 S 1919
Score = 96.7 bits (239), Expect = 7e-19
Identities = 63/129 (48%), Positives = 76/129 (58%), Gaps = 7/129 (5%)
Frame = +2
Query: 47 TPGRSPISG--TPYHEGMMSPSYMLSPNLR-----LSPTNDAQFSPYVGGMAFSPTSSPG 205
+P SP S TP SPS SPN SPT+ Q+SP+ +SPTS P
Sbjct: 1813 SPNYSPSSPQHTPAASSRYSPS---SPNYSPSSPSYSPTSP-QYSPH--STKYSPTS-PT 1865
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
Y+P+SP YSP+SP YS P YSP+SP YSPTSP P SP YS SS Y+ +S Y+ +
Sbjct: 1866 YTPTSPSYSPASPAYSSQPPRYSPSSPSYSPTSPITLPPSPYYSRSSSTYTFSSRDYTYS 1925
Query: 386 SPSYSPTSP 412
SP YSPT P
Sbjct: 1926 SPPYSPTIP 1934
[61][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
discoideum RepID=RPB1_DICDI
Length = 1727
Score = 152 bits (384), Expect = 1e-35
Identities = 82/153 (53%), Positives = 97/153 (63%), Gaps = 18/153 (11%)
Frame = +2
Query: 8 QLPSYMDGLDFGMTPGRSPISG--TPYHE---GMMSPSYMLSPNLRLSPTNDAQFSPYVG 172
Q PSY G D TP +P +P++E G SPS M SP + + + + +
Sbjct: 1491 QTPSYSYG-DGSTTPFHNPYDAPLSPFNETFRGDFSPSAMNSPGYNANKSYGSSYQYFPQ 1549
Query: 173 GMAFSPTS-------------SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGY 313
+SPTS SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP Y
Sbjct: 1550 SPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSY 1609
Query: 314 SPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1610 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1642
Score = 143 bits (361), Expect = 5e-33
Identities = 71/108 (65%), Positives = 83/108 (76%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVG--GMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPG 268
SPSY SP+ + + + SP+ ++SPTS P YSP+SP YSP+SP YSPTSP
Sbjct: 1578 SPSYSPTSPSYSPTSPSYSPTSPFYSPTSPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPS 1636
Query: 269 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1637 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1684
Score = 142 bits (357), Expect = 2e-32
Identities = 70/105 (66%), Positives = 79/105 (75%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP +SP ++SPTS P YSP+SP YSP+SP YSPTSP YSP
Sbjct: 1592 SPSY--SPTSPFYSPTSPSYSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYSP 1646
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1647 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1691
Score = 141 bits (355), Expect = 3e-32
Identities = 78/129 (60%), Positives = 94/129 (72%), Gaps = 7/129 (5%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPG 205
+P SP S P++ SPSY SP+ SPT+ + +SP ++SPTS SP
Sbjct: 1592 SPSYSPTS--PFYSPT-SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTSPSYSPTSPS 1643
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSPSSP YSP+SP+YSP+
Sbjct: 1644 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPS 1703
Query: 386 SPSYSPTSP 412
SPSYSP+SP
Sbjct: 1704 SPSYSPSSP 1712
Score = 128 bits (322), Expect = 2e-28
Identities = 72/130 (55%), Positives = 89/130 (68%), Gaps = 1/130 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY F +P S T SPSY SP+ SPT+ + +SP ++SP
Sbjct: 1593 PSYSPTSPF-YSPTSPSYSPTSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSP 1646
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSP+SP+YSPSSP YSP+SP
Sbjct: 1647 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSP 1705
Query: 371 AYSPTSPSYS 400
+YSP+SP+++
Sbjct: 1706 SYSPSSPTFT 1715
[62][TOP]
>UniRef100_Q9BMP3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monosiga brevicollis
RepID=Q9BMP3_MONBE
Length = 1743
Score = 152 bits (383), Expect = 1e-35
Identities = 83/132 (62%), Positives = 93/132 (70%), Gaps = 10/132 (7%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLR-LSPTNDAQFSPYVG-GMAFSPTS------- 196
+P SP S P G SPSY SP+ SP +AQ Y ++SPTS
Sbjct: 1552 SPSYSPTS--PNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPT 1609
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPGYSP+SPGYSPSSP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+Y
Sbjct: 1610 SPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSY 1669
Query: 377 SPTSPSYSPTSP 412
SPTSP+YSPTSP
Sbjct: 1670 SPTSPNYSPTSP 1681
Score = 147 bits (370), Expect = 5e-34
Identities = 85/136 (62%), Positives = 93/136 (68%), Gaps = 1/136 (0%)
Frame = +2
Query: 8 QLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAF 184
Q PSY +P SP S P + SP+Y SP+ SPT+ SP G +
Sbjct: 1566 QSPSYSP-----TSPSYSPSS--PAYNAQ-SPAYSPTSPSY--SPTSPNVKSPTSPG--Y 1613
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SPTS PGYSPSSP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPT
Sbjct: 1614 SPTS-PGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1672
Query: 365 SPAYSPTSPSYSPTSP 412
SP YSPTSPSYSPTSP
Sbjct: 1673 SPNYSPTSPSYSPTSP 1688
Score = 146 bits (369), Expect = 6e-34
Identities = 75/106 (70%), Positives = 86/106 (81%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SPN++ SPT+ +SP G +SP SSP YSP+SP YSP+SP YSPTSP YS
Sbjct: 1595 SPSYSPTSPNVK-SPTSPG-YSPTSPG--YSP-SSPSYSPTSPNYSPTSPSYSPTSPNYS 1649
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1650 PTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSP 1695
Score = 139 bits (349), Expect = 1e-31
Identities = 77/122 (63%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG SP S P + SPSY SPN SPT+ + +SPTS P YSP+SP
Sbjct: 1610 SPGYSPTS--PGYSPS-SPSYSPTSPNY--SPTSPS----------YSPTS-PNYSPTSP 1653
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSPSYSP
Sbjct: 1654 SYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSP 1713
Query: 404 TS 409
T+
Sbjct: 1714 TA 1715
Score = 135 bits (339), Expect = 2e-30
Identities = 76/126 (60%), Positives = 87/126 (69%), Gaps = 2/126 (1%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
G +P S T + SPSY SPN SPT+ + +SP +SPTS P YSP+
Sbjct: 1619 GYSPSSPSYSPTSPNYSPTSPSYSPTSPNY--SPTSPS-YSPTSPN--YSPTS-PSYSPT 1672
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS-PTSPAYSPTSPS 394
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP++ G S PTSP YSPTSP
Sbjct: 1673 SPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSPTSPG 1732
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1733 YSPTSP 1738
Score = 129 bits (325), Expect = 8e-29
Identities = 81/151 (53%), Positives = 92/151 (60%), Gaps = 29/151 (19%)
Frame = +2
Query: 47 TPGRSPISGTPY-----HEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGM---AFSPTS-- 196
+PG SP S + H SPSY SPT SP VGG ++SPTS
Sbjct: 1530 SPGFSPASPAGFTPTSPHYSPTSPSY--------SPT-----SPNVGGAQSPSYSPTSPS 1576
Query: 197 -----------SPGYSPSSPGYSPSSPGY-SPTSPGYSPTSPGYSPTSPGYSPTSP---- 328
SP YSP+SP YSP+SP SPTSPGYSPTSPGYSP+SP YSPTSP
Sbjct: 1577 YSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYSP 1636
Query: 329 ---TYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1637 TSPSYSPTSPNYSPTSPSYSPTSPNYSPTSP 1667
Score = 124 bits (311), Expect = 3e-27
Identities = 76/147 (51%), Positives = 92/147 (62%), Gaps = 24/147 (16%)
Frame = +2
Query: 44 MTPGRSPISGTPYHE-------GMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSS 199
M+PG +S +P+++ SPSY SP + SPT+ FSP F+PTS
Sbjct: 1493 MSPG--VVSASPFYDPSSPAGYSPTSPSYSPTSPGM--SPTSPG-FSP-ASPAGFTPTS- 1545
Query: 200 PGYSPSSPGYSPSSPG--------YSPTSPGYSPTSPGYSPTSPGYSPTSPTY------- 334
P YSP+SP YSP+SP YSPTSP YSP+SP Y+ SP YSPTSP+Y
Sbjct: 1546 PHYSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNV 1605
Query: 335 -SPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP+SPGYSPTSP YSP+SPSYSPTSP
Sbjct: 1606 KSPTSPGYSPTSPGYSPSSPSYSPTSP 1632
Score = 119 bits (299), Expect = 8e-26
Identities = 71/131 (54%), Positives = 81/131 (61%), Gaps = 16/131 (12%)
Frame = +2
Query: 68 SGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP---------TSSPGYSPS- 217
+ TP+ G M+P SP T FSP V G AFSP SPG + S
Sbjct: 1431 NATPFGMGGMTPQNASSPYFGAGQTPIGGFSPVVAG-AFSPGGMLSPGGIAQSPGGAMSP 1489
Query: 218 ----SPGYSPSSPGYSPTSP-GYSPTSPGYSPTSPGYSPTSPTYSPSSP-GYSPTSPAYS 379
SPG +SP Y P+SP GYSPTSP YSPTSPG SPTSP +SP+SP G++PTSP YS
Sbjct: 1490 GGAMSPGVVSASPFYDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYS 1549
Query: 380 PTSPSYSPTSP 412
PTSPSYSPTSP
Sbjct: 1550 PTSPSYSPTSP 1560
Score = 96.3 bits (238), Expect = 1e-18
Identities = 61/114 (53%), Positives = 69/114 (60%), Gaps = 15/114 (13%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPG 205
+P S T + SPSY SPN SPT+ + +SP +SPTS SP
Sbjct: 1635 SPTSPSYSPTSPNYSPTSPSYSPTSPNY--SPTSPS-YSPTSPN--YSPTSPSYSPTSPN 1689
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPT--------SPGYSPTSPGYSPTSPTYSPS 343
YSP+SP YSP+SP YSPTSP YSPT SPGYSPTSPGYSPTSP YSPS
Sbjct: 1690 YSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSPTSPGYSPTSPGYSPS 1743
[63][TOP]
>UniRef100_A9V5W6 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
RepID=A9V5W6_MONBE
Length = 1307
Score = 152 bits (383), Expect = 1e-35
Identities = 83/132 (62%), Positives = 93/132 (70%), Gaps = 10/132 (7%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLR-LSPTNDAQFSPYVG-GMAFSPTS------- 196
+P SP S P G SPSY SP+ SP +AQ Y ++SPTS
Sbjct: 1116 SPSYSPTS--PNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPT 1173
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPGYSP+SPGYSPSSP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+Y
Sbjct: 1174 SPGYSPTSPGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSY 1233
Query: 377 SPTSPSYSPTSP 412
SPTSP+YSPTSP
Sbjct: 1234 SPTSPNYSPTSP 1245
Score = 147 bits (370), Expect = 5e-34
Identities = 85/136 (62%), Positives = 93/136 (68%), Gaps = 1/136 (0%)
Frame = +2
Query: 8 QLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAF 184
Q PSY +P SP S P + SP+Y SP+ SPT+ SP G +
Sbjct: 1130 QSPSYSP-----TSPSYSPSS--PAYNAQ-SPAYSPTSPSY--SPTSPNVKSPTSPG--Y 1177
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SPTS PGYSPSSP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPT
Sbjct: 1178 SPTS-PGYSPSSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPT 1236
Query: 365 SPAYSPTSPSYSPTSP 412
SP YSPTSPSYSPTSP
Sbjct: 1237 SPNYSPTSPSYSPTSP 1252
Score = 146 bits (369), Expect = 6e-34
Identities = 75/106 (70%), Positives = 86/106 (81%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SPN++ SPT+ +SP G +SP SSP YSP+SP YSP+SP YSPTSP YS
Sbjct: 1159 SPSYSPTSPNVK-SPTSPG-YSPTSPG--YSP-SSPSYSPTSPNYSPTSPSYSPTSPNYS 1213
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1214 PTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSP 1259
Score = 139 bits (349), Expect = 1e-31
Identities = 77/122 (63%), Positives = 86/122 (70%), Gaps = 1/122 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG SP S P + SPSY SPN SPT+ + +SPTS P YSP+SP
Sbjct: 1174 SPGYSPTS--PGYSPS-SPSYSPTSPNY--SPTSPS----------YSPTS-PNYSPTSP 1217
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSPSYSP
Sbjct: 1218 SYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSP 1277
Query: 404 TS 409
T+
Sbjct: 1278 TA 1279
Score = 135 bits (339), Expect = 2e-30
Identities = 76/126 (60%), Positives = 87/126 (69%), Gaps = 2/126 (1%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
G +P S T + SPSY SPN SPT+ + +SP +SPTS P YSP+
Sbjct: 1183 GYSPSSPSYSPTSPNYSPTSPSYSPTSPNY--SPTSPS-YSPTSPN--YSPTS-PSYSPT 1236
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS-PTSPAYSPTSPS 394
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP++ G S PTSP YSPTSP
Sbjct: 1237 SPNYSPTSPSYSPTSPNYSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSPTSPG 1296
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1297 YSPTSP 1302
Score = 129 bits (325), Expect = 8e-29
Identities = 81/151 (53%), Positives = 92/151 (60%), Gaps = 29/151 (19%)
Frame = +2
Query: 47 TPGRSPISGTPY-----HEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGM---AFSPTS-- 196
+PG SP S + H SPSY SPT SP VGG ++SPTS
Sbjct: 1094 SPGFSPASPAGFTPTSPHYSPTSPSY--------SPT-----SPNVGGAQSPSYSPTSPS 1140
Query: 197 -----------SPGYSPSSPGYSPSSPGY-SPTSPGYSPTSPGYSPTSPGYSPTSP---- 328
SP YSP+SP YSP+SP SPTSPGYSPTSPGYSP+SP YSPTSP
Sbjct: 1141 YSPSSPAYNAQSPAYSPTSPSYSPTSPNVKSPTSPGYSPTSPGYSPSSPSYSPTSPNYSP 1200
Query: 329 ---TYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1201 TSPSYSPTSPNYSPTSPSYSPTSPNYSPTSP 1231
Score = 124 bits (311), Expect = 3e-27
Identities = 76/147 (51%), Positives = 92/147 (62%), Gaps = 24/147 (16%)
Frame = +2
Query: 44 MTPGRSPISGTPYHE-------GMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSS 199
M+PG +S +P+++ SPSY SP + SPT+ FSP F+PTS
Sbjct: 1057 MSPG--VVSASPFYDPSSPAGYSPTSPSYSPTSPGM--SPTSPG-FSP-ASPAGFTPTS- 1109
Query: 200 PGYSPSSPGYSPSSPG--------YSPTSPGYSPTSPGYSPTSPGYSPTSPTY------- 334
P YSP+SP YSP+SP YSPTSP YSP+SP Y+ SP YSPTSP+Y
Sbjct: 1110 PHYSPTSPSYSPTSPNVGGAQSPSYSPTSPSYSPSSPAYNAQSPAYSPTSPSYSPTSPNV 1169
Query: 335 -SPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP+SPGYSPTSP YSP+SPSYSPTSP
Sbjct: 1170 KSPTSPGYSPTSPGYSPSSPSYSPTSP 1196
Score = 121 bits (303), Expect = 3e-26
Identities = 72/131 (54%), Positives = 82/131 (62%), Gaps = 16/131 (12%)
Frame = +2
Query: 68 SGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP---------TSSPGYSPS- 217
+ TP+ G M+P SP L T FSP V G AFSP SPG + S
Sbjct: 995 NATPFGMGGMTPQNASSPYLGAGQTPIGGFSPVVAG-AFSPGGMLSPGGIAQSPGGAMSP 1053
Query: 218 ----SPGYSPSSPGYSPTSP-GYSPTSPGYSPTSPGYSPTSPTYSPSSP-GYSPTSPAYS 379
SPG +SP Y P+SP GYSPTSP YSPTSPG SPTSP +SP+SP G++PTSP YS
Sbjct: 1054 GGAMSPGVVSASPFYDPSSPAGYSPTSPSYSPTSPGMSPTSPGFSPASPAGFTPTSPHYS 1113
Query: 380 PTSPSYSPTSP 412
PTSPSYSPTSP
Sbjct: 1114 PTSPSYSPTSP 1124
Score = 96.3 bits (238), Expect = 1e-18
Identities = 61/114 (53%), Positives = 69/114 (60%), Gaps = 15/114 (13%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPG 205
+P S T + SPSY SPN SPT+ + +SP +SPTS SP
Sbjct: 1199 SPTSPSYSPTSPNYSPTSPSYSPTSPNY--SPTSPS-YSPTSPN--YSPTSPSYSPTSPN 1253
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPT--------SPGYSPTSPGYSPTSPTYSPS 343
YSP+SP YSP+SP YSPTSP YSPT SPGYSPTSPGYSPTSP YSPS
Sbjct: 1254 YSPTSPSYSPTSPNYSPTSPSYSPTANGTSGPTSPGYSPTSPGYSPTSPGYSPS 1307
[64][TOP]
>UniRef100_UPI000179338A PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179338A
Length = 1862
Score = 151 bits (382), Expect = 2e-35
Identities = 80/141 (56%), Positives = 96/141 (68%), Gaps = 9/141 (6%)
Frame = +2
Query: 17 SYMDGLDFG-MTPGRSPISGTPYHEGMMS-----PSYM-LSPNLRLSPTNDAQF--SPYV 169
+Y FG M+P +P + +P + P Y +SPN SPT+ + SP
Sbjct: 1585 NYPSSPQFGSMSPSMTPTNYSPTSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPTSPSY 1644
Query: 170 GGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSP 349
++SPTS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP
Sbjct: 1645 SHTSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1703
Query: 350 GYSPTSPAYSPTSPSYSPTSP 412
YSPTSP+YSPTSPSYSPTSP
Sbjct: 1704 SYSPTSPSYSPTSPSYSPTSP 1724
Score = 131 bits (329), Expect = 3e-29
Identities = 71/124 (57%), Positives = 89/124 (71%), Gaps = 3/124 (2%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMM--SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
+P SP S + H SPSY SP+ SPT+ + +SP ++SPTS P YSP+
Sbjct: 1634 SPSYSPTSPSYSHTSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPT 1687
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP Y+ +SPSY
Sbjct: 1688 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYTASSPSY 1747
Query: 398 SPTS 409
+P++
Sbjct: 1748 TPSA 1751
Score = 103 bits (257), Expect = 6e-21
Identities = 79/199 (39%), Positives = 92/199 (46%), Gaps = 66/199 (33%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY +P SP S + SPSY SP+ SPT+ + +SP ++SP
Sbjct: 1642 PSYSHTSYSPTSPSYSPTSPS---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSP 1693
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP-------------- 328
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSP+SP
Sbjct: 1694 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYTASSPSYTPSAT 1752
Query: 329 -------------------TYSPSSP---------------------------GYSPTSP 370
TYSP+SP YSP+SP
Sbjct: 1753 SGASNYKYSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSVQHTPNAGVTQYNQSYSPSSP 1812
Query: 371 AYSPT-----SPSYSPTSP 412
YSPT SP YSPTSP
Sbjct: 1813 VYSPTNFSLASPRYSPTSP 1831
Score = 99.4 bits (246), Expect = 1e-19
Identities = 61/121 (50%), Positives = 73/121 (60%), Gaps = 20/121 (16%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS----- 262
SPSY S S ++ ++SP +A SPT YSP+SP YSPS+ YSP+S
Sbjct: 1744 SPSYTPSAT---SGASNYKYSPTSPSLAVSPT----YSPTSPMYSPSNASYSPSSVQHTP 1796
Query: 263 --------PGYSPTSPGYSPT-----SPGYSPTSPTYSPS--SPGYSPTSPAYSPTSPSY 397
YSP+SP YSPT SP YSPTSPTYSP SP YSP+SP+YSPTSP+Y
Sbjct: 1797 NAGVTQYNQSYSPSSPVYSPTNFSLASPRYSPTSPTYSPGVGSPNYSPSSPSYSPTSPNY 1856
Query: 398 S 400
S
Sbjct: 1857 S 1857
Score = 86.3 bits (212), Expect = 1e-15
Identities = 71/212 (33%), Positives = 86/212 (40%), Gaps = 83/212 (39%)
Frame = +2
Query: 26 DGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
DG++ M G + G +PS +SP + T Q S V ++S + G
Sbjct: 1477 DGIEIPMDNGYMGMGAGGMFMGAGTPS--MSPAM----TPWDQTSTPVYQNSWSSSLEAG 1530
Query: 206 YSPSSPGYSPS--------------------SPG-------------------------- 247
+P PG+SP+ SPG
Sbjct: 1531 MTPGGPGFSPAGSSEASGTSPFWMTSGGTPGSPGSPGMATSPYVPSPNSMSPNYNYPSSP 1590
Query: 248 -------------YSPTSPGY-------------------SPTSPGYSPTSP-----GYS 316
YSPTSP Y SPTSP YSPTSP YS
Sbjct: 1591 QFGSMSPSMTPTNYSPTSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPTSPSYSHTSYS 1650
Query: 317 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682
[65][TOP]
>UniRef100_UPI00005A0B27 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 18 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B27
Length = 1831
Score = 151 bits (382), Expect = 2e-35
Identities = 83/145 (57%), Positives = 97/145 (66%), Gaps = 9/145 (6%)
Frame = +2
Query: 5 LQLPSYMDGLDF----GMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVG 172
+++P+ + GL GMTPG + G MSPSY SPT+ A G
Sbjct: 1481 MEIPTNIPGLGAAGRSGMTPGAAG--------GAMSPSY--------SPTSPAYEPRSPG 1524
Query: 173 GM-----AFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 337
G ++SPTS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YS
Sbjct: 1525 GYTPQSPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1583
Query: 338 PSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1584 PTSPSYSPTSPSYSPTSPSYSPTSP 1608
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1516 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1570
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1571 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1629
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1630 SYSPTSPSYSPTSP 1643
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1593 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1646
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1647 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1692
Score = 135 bits (341), Expect = 1e-30
Identities = 70/107 (65%), Positives = 81/107 (75%), Gaps = 2/107 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSP-YVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY 271
SPSY SP+ + N SP Y ++SP SSP Y+P+SP YSP+SP YSPTSP Y
Sbjct: 1677 SPSYSPTSPSYSPTSPNYTPMSPNYSPTPSYSP-SSPEYTPTSPKYSPTSPKYSPTSPKY 1735
Query: 272 SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 1736 SPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1782
Score = 135 bits (339), Expect = 2e-30
Identities = 74/124 (59%), Positives = 85/124 (68%), Gaps = 2/124 (1%)
Frame = +2
Query: 47 TPGRSPISG--TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
+P SP S TP MSP+Y +P+ S SP +SPTS P YSP+S
Sbjct: 1684 SPSYSPTSPNYTP-----MSPNYSPTPSYSPSSPEYTPTSP-----KYSPTS-PKYSPTS 1732
Query: 221 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 400
P YSP+SP YSPT+P YSPTSP YSPTSP Y+PTSP YSP+SP YSPTSP YSPTSP+YS
Sbjct: 1733 PKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYS 1792
Query: 401 PTSP 412
PTSP
Sbjct: 1793 PTSP 1796
Score = 134 bits (336), Expect = 4e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1600 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1653
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP+Y+P SP
Sbjct: 1654 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1699
Score = 129 bits (323), Expect = 1e-28
Identities = 66/104 (63%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1607 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1660
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
PTSP YSP+ P Y+PTSP+YSP+SP YSPTSP Y+P SP+YSPT
Sbjct: 1661 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPT 1704
Score = 126 bits (317), Expect = 7e-28
Identities = 77/132 (58%), Positives = 90/132 (68%), Gaps = 6/132 (4%)
Frame = +2
Query: 35 DFGMTPGRSPISG--TPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
++ TP SP S TP SP Y SP + SPT+ ++SP +SPT+ P
Sbjct: 1700 NYSPTPSYSPSSPEYTP-----TSPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PK 1748
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAY 376
YSP+SP YSP+SP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP+SP YSPTSP Y
Sbjct: 1749 YSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGY 1808
Query: 377 SPTSPSYSPTSP 412
SPTSP+YS TSP
Sbjct: 1809 SPTSPTYSLTSP 1820
Score = 115 bits (288), Expect = 2e-24
Identities = 68/119 (57%), Positives = 80/119 (67%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG-------YSPSSPGYS 253
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YS
Sbjct: 1614 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1667
Query: 254 PTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT------SPAYSPTSPSYSPTSP 412
P+ P Y+PTSP YSPTSP YSPTSP Y+P SP YSPT SP Y+PTSP YSPTSP
Sbjct: 1668 PSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTPSYSPSSPEYTPTSPKYSPTSP 1726
Score = 114 bits (285), Expect = 3e-24
Identities = 67/113 (59%), Positives = 79/113 (69%), Gaps = 8/113 (7%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSP-------GYS 253
SPSY SP+ SPT+ + +SP ++SPTS P YSPS P Y+P+SP YS
Sbjct: 1635 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PNYSPSRPNYTPTSPSYSPTSPSYS 1688
Query: 254 PTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP Y+P SP YSPT P YSP+SP Y+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1689 PTSPNYTPMSPNYSPT-PSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSP 1740
Score = 95.5 bits (236), Expect = 2e-18
Identities = 59/114 (51%), Positives = 65/114 (57%), Gaps = 9/114 (7%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGY 208
TP S T SP Y SP ++SP +SPTS SP Y
Sbjct: 1715 TPTSPKYSPTSPKYSPTSPKY--SPTSPTYSPTTPKYSPT--SPTYSPTSPVYTPTSPKY 1770
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPG---YSPTSPGYSPTSPTYSPSSPGYSP 361
SP+SP YSP+SP YSPTSP YSPTSP YSPTSPGYSPTSPTYS +SP SP
Sbjct: 1771 SPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1824
[66][TOP]
>UniRef100_UPI00005A0B1A PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 6 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B1A
Length = 1767
Score = 151 bits (382), Expect = 2e-35
Identities = 76/128 (59%), Positives = 86/128 (67%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP A+ P S GY
Sbjct: 1530 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGELSCGAMSPSYSPT--SPAYEPRSPGGY 1586
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1587 TPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1646
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1647 PSYSPTSP 1654
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1576 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1630
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1631 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1690 SYSPTSPSYSPTSP 1703
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1653 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1706
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1707 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1752
Score = 134 bits (336), Expect = 4e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1660 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1713
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP+Y+P SP
Sbjct: 1714 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1759
Score = 133 bits (334), Expect = 7e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1667 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1720
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSP+ P Y+PTSP+YSP+SP YSPTSP Y+P SP+YSPTSP
Sbjct: 1721 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1766
Score = 120 bits (302), Expect = 4e-26
Identities = 73/178 (41%), Positives = 92/178 (51%), Gaps = 42/178 (23%)
Frame = +2
Query: 5 LQLPSYMDGLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYV 169
+++P+ + GL GR P+ G TP+++G SP ++P
Sbjct: 1469 MEIPTNIPGLG---AAGRDPMGGISPAMTPWNQGATPAYGAWSPRSGMTP---------- 1515
Query: 170 GGMAFSPTSSPGYSPSSPGYSPS-----------------------------SPGYSPTS 262
G FSP+++ S SPGYSP+ SP YSPTS
Sbjct: 1516 GAAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGELSCGAMSPSYSPTS 1575
Query: 263 P--------GYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P GY+P SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1576 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1633
Score = 120 bits (300), Expect = 6e-26
Identities = 62/100 (62%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1674 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1727
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
P+ P Y+PTSP YSPTSP+YSP+SP Y+P SP YSPTSP+
Sbjct: 1728 PSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1767
[67][TOP]
>UniRef100_UPI00005A0B19 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 5 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B19
Length = 1693
Score = 151 bits (382), Expect = 2e-35
Identities = 83/145 (57%), Positives = 97/145 (66%), Gaps = 9/145 (6%)
Frame = +2
Query: 5 LQLPSYMDGLDF----GMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVG 172
+++P+ + GL GMTPG + G MSPSY SPT+ A G
Sbjct: 1467 MEIPTNIPGLGAAGRSGMTPGAAG--------GAMSPSY--------SPTSPAYEPRSPG 1510
Query: 173 GM-----AFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 337
G ++SPTS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YS
Sbjct: 1511 GYTPQSPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1569
Query: 338 PSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1570 PTSPSYSPTSPSYSPTSPSYSPTSP 1594
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1502 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1556
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1557 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1615
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1616 SYSPTSPSYSPTSP 1629
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1579 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1632
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1633 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1678
Score = 134 bits (336), Expect = 4e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1586 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1639
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP+Y+P SP
Sbjct: 1640 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1685
Score = 133 bits (334), Expect = 7e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1593 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1646
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSP+ P Y+PTSP+YSP+SP YSPTSP Y+P SP+YSPTSP
Sbjct: 1647 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1692
Score = 120 bits (300), Expect = 6e-26
Identities = 62/100 (62%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1600 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1653
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
P+ P Y+PTSP YSPTSP+YSP+SP Y+P SP YSPTSP+
Sbjct: 1654 PSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1693
[68][TOP]
>UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E6J4_LODEL
Length = 1745
Score = 151 bits (382), Expect = 2e-35
Identities = 78/133 (58%), Positives = 87/133 (65%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
P +G TPG GT G SP Y SP +SP ++SPT
Sbjct: 1510 PGNTSPFSYGTTPG---YGGTSPGYGGTSPGYGYSPTSPSYSPTSPSYSPT--SPSYSPT 1564
Query: 194 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
S P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+
Sbjct: 1565 S-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1623
Query: 374 YSPTSPSYSPTSP 412
YSPTSPSYSPTSP
Sbjct: 1624 YSPTSPSYSPTSP 1636
Score = 147 bits (370), Expect = 5e-34
Identities = 76/124 (61%), Positives = 85/124 (68%), Gaps = 1/124 (0%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSP-SYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
M G + G P G SP SY +P + SP G +SPTS P YSP+S
Sbjct: 1496 MNGGLTSYGGQPTSPGNTSPFSYGTTPGYGGTSPGYGGTSP---GYGYSPTS-PSYSPTS 1551
Query: 221 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 400
P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYS
Sbjct: 1552 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1611
Query: 401 PTSP 412
PTSP
Sbjct: 1612 PTSP 1615
Score = 145 bits (367), Expect = 1e-33
Identities = 79/132 (59%), Positives = 92/132 (69%), Gaps = 7/132 (5%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------ 196
+G +P S T SPSY SP+ SPT+ + +SP ++SPTS
Sbjct: 1538 YGYSPTSPSYSPTSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTSPSYSPT 1592
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+Y
Sbjct: 1593 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1652
Query: 377 SPTSPSYSPTSP 412
SPTSPSYSPTSP
Sbjct: 1653 SPTSPSYSPTSP 1664
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1579 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1632
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1633 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1678
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1586 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1639
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1640 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1685
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1593 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1646
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP YSPTSP
Sbjct: 1647 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP 1692
Score = 142 bits (357), Expect = 2e-32
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1607 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1660
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSPSYSPTSP
Sbjct: 1661 PTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSP 1706
Score = 142 bits (357), Expect = 2e-32
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1614 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1667
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1668 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSP 1713
Score = 140 bits (353), Expect = 4e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1621 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1674
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP+YSPTSP YSPTSP
Sbjct: 1675 PTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSP 1720
Score = 137 bits (345), Expect = 4e-31
Identities = 72/106 (67%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1628 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1681
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSP YSP SP
Sbjct: 1682 PTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPRSP 1727
Score = 134 bits (338), Expect = 2e-30
Identities = 71/106 (66%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1635 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPQYS 1688
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSP SP+YSP SP
Sbjct: 1689 PTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPRSPNYSPKSP 1734
Score = 129 bits (324), Expect = 1e-28
Identities = 69/106 (65%), Positives = 78/106 (73%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1642 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPQYSPTSPQYS 1695
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSP SP YSP SP Y P SP
Sbjct: 1696 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPRSPNYSPKSPEYKPKSP 1741
Score = 119 bits (299), Expect = 8e-26
Identities = 65/100 (65%), Positives = 73/100 (73%), Gaps = 1/100 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1649 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPQYSPTSPQYSPTSPSYS 1702
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
PTSP YSPTSP YSPTSP YSP SP YSP SP Y P SPS
Sbjct: 1703 PTSPSYSPTSPQYSPTSPQYSPRSPNYSPKSPEYKPKSPS 1742
Score = 115 bits (288), Expect = 2e-24
Identities = 64/119 (53%), Positives = 75/119 (63%), Gaps = 6/119 (5%)
Frame = +2
Query: 74 TPYHE-GMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAF---SPTSSPGYSPSSPGYSPSS 241
TPY + M ++ SP ++A GG+ PTS SP S G ++
Sbjct: 1465 TPYRDLEMEDEQIVVDEGAGFSPVHNAMSDNMNGGLTSYGGQPTSPGNTSPFSYG---TT 1521
Query: 242 PGYSPTSPGYSPTSP--GYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PGY TSPGY TSP GYSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1522 PGYGGTSPGYGGTSPGYGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1580
[69][TOP]
>UniRef100_UPI0000E48673 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 1 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48673
Length = 1880
Score = 151 bits (381), Expect = 2e-35
Identities = 78/124 (62%), Positives = 86/124 (69%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
GMTPG S SP+Y SP P + SP +SPTS P YSP+S
Sbjct: 1530 GMTPGGPGFSPANSESTGFSPAY--SPAWSPQPQSPGSPSP-----GYSPTS-PSYSPTS 1581
Query: 221 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 400
PGYSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYS
Sbjct: 1582 PGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1641
Query: 401 PTSP 412
PTSP
Sbjct: 1642 PTSP 1645
Score = 149 bits (376), Expect = 9e-35
Identities = 80/126 (63%), Positives = 91/126 (72%), Gaps = 2/126 (1%)
Frame = +2
Query: 41 GMTPGRSPI-SGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
G +P SP S P G SP Y SP+ SPT+ +SP ++SPTS P YSP
Sbjct: 1547 GFSPAYSPAWSPQPQSPGSPSPGYSPTSPSY--SPTSPG-YSP--ASPSYSPTS-PSYSP 1600
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPS
Sbjct: 1601 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1660
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1661 YSPTSP 1666
Score = 146 bits (368), Expect = 8e-34
Identities = 83/150 (55%), Positives = 93/150 (62%), Gaps = 20/150 (13%)
Frame = +2
Query: 23 MDGLDFG--------MTPGRSPIS--GTPYHEGMMSP---SYMLSPNLRLSPTNDAQ--- 154
M G+ FG M+P +P + TP H SP S M SP N
Sbjct: 1489 MPGMLFGAMGSPSQSMSPQMTPWNQGATPMHGASWSPMMGSGMTPGGPGFSPANSESTGF 1548
Query: 155 ---FSPYVGGMAFSPTS-SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPT 322
+SP SP S SPGYSP+SP YSP+SPGYSP SP YSPTSP YSPTSP YSPT
Sbjct: 1549 SPAYSPAWSPQPQSPGSPSPGYSPTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPT 1608
Query: 323 SPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1609 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1638
Score = 145 bits (367), Expect = 1e-33
Identities = 81/127 (63%), Positives = 94/127 (74%), Gaps = 5/127 (3%)
Frame = +2
Query: 47 TPGRSPISGT--PYHEGMM--SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+PG SP S + P G SPSY SP+ SPT+ + +SP ++SPTS P YS
Sbjct: 1567 SPGYSPTSPSYSPTSPGYSPASPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYS 1620
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
P+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP
Sbjct: 1621 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1680
Query: 392 SYSPTSP 412
SYSPTSP
Sbjct: 1681 SYSPTSP 1687
Score = 145 bits (367), Expect = 1e-33
Identities = 79/123 (64%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG SP S + SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1581 SPGYSPASPS---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1631
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1632 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1691
Query: 404 TSP 412
TSP
Sbjct: 1692 TSP 1694
Score = 145 bits (367), Expect = 1e-33
Identities = 78/125 (62%), Positives = 90/125 (72%), Gaps = 1/125 (0%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
G +P S T SPSY SP+ SPT+ + +SP ++SPTS P YSP+
Sbjct: 1583 GYSPASPSYSPTSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPT 1636
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSY
Sbjct: 1637 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1696
Query: 398 SPTSP 412
SPTSP
Sbjct: 1697 SPTSP 1701
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1616 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1669
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1670 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1715
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1623 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1676
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1677 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1722
Score = 141 bits (356), Expect = 2e-32
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1644 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1697
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP YSPTSP+YSPTSPSYSP SP
Sbjct: 1698 PTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSP 1743
Score = 139 bits (350), Expect = 1e-31
Identities = 74/106 (69%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSPSSP YSPTSP YS
Sbjct: 1679 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPSSPKYSPTSPSYS 1732
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSP SP YSP SP+YSPSSP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1733 PTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSP 1778
Score = 137 bits (346), Expect = 3e-31
Identities = 81/139 (58%), Positives = 89/139 (64%), Gaps = 4/139 (2%)
Frame = +2
Query: 8 QLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAF 184
Q PSY G +P S T SPSY SPN S + SP ++
Sbjct: 1741 QSPSYSPGSP-SYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASP-----SY 1794
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSP---GY 355
SPTS P YSPSSP YSP+SP YSPTSP YSP SP YSPTSP YSP+SPTYSP+SP Y
Sbjct: 1795 SPTS-PKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTY 1853
Query: 356 SPTSPAYSPTSPSYSPTSP 412
SPTSP+YSPTSPSYSPTSP
Sbjct: 1854 SPTSPSYSPTSPSYSPTSP 1872
Score = 136 bits (342), Expect = 8e-31
Identities = 71/106 (66%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1651 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1704
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+SP YSP+SP YSPTSP+YSP SPSYSP SP
Sbjct: 1705 PTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSP 1750
Score = 135 bits (341), Expect = 1e-30
Identities = 76/122 (62%), Positives = 91/122 (74%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P SP S + Y G SPSY S + + SPT+ + +SP ++SPTS P +SPSSP
Sbjct: 1735 SPSYSPQSPS-YSPG--SPSYSPS-SPKYSPTSPS-YSPT--SPSYSPTS-PNFSPSSPT 1786
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
YSP+SP YSPTSP YSP+SP YSPTSP YSPTSP YSP+SP YSPTSP YSP+SP+YSPT
Sbjct: 1787 YSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPT 1846
Query: 407 SP 412
SP
Sbjct: 1847 SP 1848
Score = 134 bits (338), Expect = 2e-30
Identities = 68/105 (64%), Positives = 75/105 (71%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP +SP G ++SP SSP YSP+SP YSP+SP YSPTSP +SP
Sbjct: 1728 SPSY--SPTSPSYSPQSPSYSP--GSPSYSP-SSPKYSPTSPSYSPTSPSYSPTSPNFSP 1782
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSP SP YSPTSP YSPSSP YSPTSP YSPTSP YSP SP
Sbjct: 1783 SSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASP 1827
Score = 132 bits (333), Expect = 9e-30
Identities = 69/106 (65%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP +SPTS P YSP+SP YSP SP YSP SP YS
Sbjct: 1700 SPSYSPTSPSY--SPTSPS-YSP--SSPKYSPTS-PSYSPTSPSYSPQSPSYSPGSPSYS 1753
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSPTSP YSPTSP+YSP+SP +SP+SP YSP SPSYSPTSP
Sbjct: 1754 PSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSP 1799
Score = 127 bits (318), Expect = 5e-28
Identities = 69/112 (61%), Positives = 78/112 (69%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP-------GYSPSSPGYSP 256
SPSY SP + ++SP ++SPTS P YSP SP YSPSSP YSP
Sbjct: 1707 SPSY--SPTSPSYSPSSPKYSPT--SPSYSPTS-PSYSPQSPSYSPGSPSYSPSSPKYSP 1761
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP +SP+SPTYSP+SP YSPTSP YSP+SP YSPTSP
Sbjct: 1762 TSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSP 1813
Score = 72.4 bits (176), Expect = 1e-11
Identities = 45/91 (49%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P S T SP Y SP ++SP +SPTS P YSPSSP
Sbjct: 1788 SPASPSYSPTSPKYSPSSPKY--SPTSPTYSPTSPKYSP--ASPTYSPTS-PKYSPSSPT 1842
Query: 227 YSPSSPG---YSPTSPGYSPTSPGYSPTSPG 310
YSP+SP YSPTSP YSPTSP YSPTSPG
Sbjct: 1843 YSPTSPKGSTYSPTSPSYSPTSPSYSPTSPG 1873
[70][TOP]
>UniRef100_UPI000179348F PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB1
(RNA polymerase II subunit B1) (DNA-directed RNA
polymerase III largest subunit) n=1 Tax=Acyrthosiphon
pisum RepID=UPI000179348F
Length = 1862
Score = 150 bits (380), Expect = 3e-35
Identities = 79/127 (62%), Positives = 90/127 (70%), Gaps = 4/127 (3%)
Frame = +2
Query: 44 MTPGR-SPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQF--SPYVGGMAFSPTSSPGYS 211
MTP SP S +P Y +SPN SPT+ + SP ++SPTS P YS
Sbjct: 1599 MTPTNYSPTSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPTSPSYSHTSYSPTS-PSYS 1657
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
P+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP
Sbjct: 1658 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1717
Query: 392 SYSPTSP 412
SYSPTSP
Sbjct: 1718 SYSPTSP 1724
Score = 131 bits (329), Expect = 3e-29
Identities = 71/124 (57%), Positives = 89/124 (71%), Gaps = 3/124 (2%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMM--SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
+P SP S + H SPSY SP+ SPT+ + +SP ++SPTS P YSP+
Sbjct: 1634 SPSYSPTSPSYSHTSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPT 1687
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSP+SP Y+ +SPSY
Sbjct: 1688 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPSY 1747
Query: 398 SPTS 409
+P++
Sbjct: 1748 TPSA 1751
Score = 118 bits (296), Expect = 2e-25
Identities = 71/131 (54%), Positives = 87/131 (66%), Gaps = 6/131 (4%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSP-GYSP 214
F M+ G +P G+P GM + Y+ SP+ +SP + SP G + SP+ +P YSP
Sbjct: 1552 FWMSSGGTP--GSPGSPGMATSPYVPSPS-SMSPNYNYPSSPQFGSL--SPSMTPTNYSP 1606
Query: 215 SSPGYSPS---SPGYSPTSPGY--SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
+SP YS + +P YS SP Y SPTSP YSPTSP YS TS YSP+SP YSPTSP+YS
Sbjct: 1607 TSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPTSPSYSHTS--YSPTSPSYSPTSPSYS 1664
Query: 380 PTSPSYSPTSP 412
PTSPSYSPTSP
Sbjct: 1665 PTSPSYSPTSP 1675
Score = 103 bits (257), Expect = 6e-21
Identities = 79/199 (39%), Positives = 92/199 (46%), Gaps = 66/199 (33%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY +P SP S + SPSY SP+ SPT+ + +SP ++SP
Sbjct: 1642 PSYSHTSYSPTSPSYSPTSPS---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSP 1693
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP-------------- 328
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSP+SP
Sbjct: 1694 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPQYAASSPSYTPSAT 1752
Query: 329 -------------------TYSPSSP---------------------------GYSPTSP 370
TYSP+SP YSP+SP
Sbjct: 1753 SGTSNYKYSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSLQHTPNAGGTQYNQSYSPSSP 1812
Query: 371 AYSPT-----SPSYSPTSP 412
YSPT SP YSPTSP
Sbjct: 1813 VYSPTNFSMASPRYSPTSP 1831
Score = 102 bits (253), Expect = 2e-20
Identities = 62/117 (52%), Positives = 76/117 (64%), Gaps = 16/117 (13%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT---SSPGYSPSSPGYSPSSPGYSPTSPG 268
SPSY S S T++ ++SP +A SPT +SP YSPS+ YSPSS ++P + G
Sbjct: 1744 SPSYTPSAT---SGTSNYKYSPTSPSLAVSPTYSPTSPMYSPSNASYSPSSLQHTPNAGG 1800
Query: 269 ------YSPTSPGYSPT-----SPGYSPTSPTYSPS--SPGYSPTSPAYSPTSPSYS 400
YSP+SP YSPT SP YSPTSPTYSP SP YSP+SP+YSPTSP+YS
Sbjct: 1801 TQYNQSYSPSSPVYSPTNFSMASPRYSPTSPTYSPGVGSPHYSPSSPSYSPTSPNYS 1857
Score = 85.9 bits (211), Expect = 1e-15
Identities = 69/212 (32%), Positives = 85/212 (40%), Gaps = 83/212 (39%)
Frame = +2
Query: 26 DGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
DG++ M G + G +PS +SP ++P + Y +S + G
Sbjct: 1477 DGIEIPMDNGYMGMGGGGMFMAAGTPS--MSP--AMTPWDQTSTPMYQNN--WSSSLETG 1530
Query: 206 YSPSSPGYSPS--------------------SPG-------------------------- 247
+P PG+SP+ SPG
Sbjct: 1531 MTPGGPGFSPAGSSEASGTSPFWMSSGGTPGSPGSPGMATSPYVPSPSSMSPNYNYPSSP 1590
Query: 248 -------------YSPTSPGY-------------------SPTSPGYSPTSP-----GYS 316
YSPTSP Y SPTSP YSPTSP YS
Sbjct: 1591 QFGSLSPSMTPTNYSPTSPQYSATQQNTPKYSSMSPNYNYSPTSPSYSPTSPSYSHTSYS 1650
Query: 317 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682
[71][TOP]
>UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WN64_CANDC
Length = 1735
Score = 150 bits (380), Expect = 3e-35
Identities = 82/135 (60%), Positives = 95/135 (70%), Gaps = 2/135 (1%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTP-YHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFS 187
P+ FG SP +P Y SPSY SP+ SPT+ + +SP ++S
Sbjct: 1518 PAATSPFSFGYNTATSPGYASPGYGYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYS 1572
Query: 188 PTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTS 367
PTS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SPGYSPTS
Sbjct: 1573 PTS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTS 1631
Query: 368 PAYSPTSPSYSPTSP 412
P+YSPTSPSYSPTSP
Sbjct: 1632 PSYSPTSPSYSPTSP 1646
Score = 148 bits (374), Expect = 2e-34
Identities = 79/126 (62%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
+G +P S T SPSY SP+ SPT+ + +SP ++SPTS P YSP
Sbjct: 1541 YGYSPTSPSYSPTSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSP 1594
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
+SP YSP+SP YSPTSP YSPTSP YSPTSPGYSPTSP+YSP+SP YSPTSP+YSPTSPS
Sbjct: 1595 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1654
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1655 YSPTSP 1660
Score = 144 bits (363), Expect = 3e-33
Identities = 75/106 (70%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SPGYSP+SP YSPTSP YS
Sbjct: 1589 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPGYSPTSPSYSPTSPSYS 1642
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSPSYSPTSP
Sbjct: 1643 PTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSP 1688
Score = 142 bits (359), Expect = 9e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS PGYSP+SP YSP+SP YSPTSP YS
Sbjct: 1596 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PGYSPTSPSYSPTSPSYSPTSPSYS 1649
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP YSPTSP
Sbjct: 1650 PTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSP 1695
Score = 142 bits (358), Expect = 1e-32
Identities = 75/106 (70%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP G +SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1603 SPSYSPTSPSY--SPTSPS-YSPTSPG--YSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1656
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSPSYSPTSP
Sbjct: 1657 PTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSP 1702
Score = 138 bits (348), Expect = 2e-31
Identities = 73/106 (68%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1617 SPSYSPTSPGY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPQYSPTSPSYS 1670
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1671 PTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSP 1716
Score = 132 bits (331), Expect = 2e-29
Identities = 73/122 (59%), Positives = 83/122 (68%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+PG SP S + SPSY SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1624 SPGYSPTSPS---YSPTSPSY--------SPTSPS-YSPT--SPSYSPTS-PQYSPTSPS 1668
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP YSP SP Y P
Sbjct: 1669 YSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSPRYSPGSPGYEPK 1728
Query: 407 SP 412
SP
Sbjct: 1729 SP 1730
[72][TOP]
>UniRef100_UPI0000E48672 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 2 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48672
Length = 1913
Score = 150 bits (379), Expect = 4e-35
Identities = 79/124 (63%), Positives = 89/124 (71%), Gaps = 2/124 (1%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPN-LRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
+P SP +P G MSPSY SP+ L SP ++SPTS PGYSP+S
Sbjct: 1565 SPANSPYIPSP--AGPMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTS-PGYSPAS 1621
Query: 221 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 400
P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYS
Sbjct: 1622 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1681
Query: 401 PTSP 412
PTSP
Sbjct: 1682 PTSP 1685
Score = 148 bits (374), Expect = 2e-34
Identities = 75/127 (59%), Positives = 90/127 (70%), Gaps = 3/127 (2%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPS---YMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
G +P SP + +P + SP+ Y+ SP +SP+ Y+ +P SPGYS
Sbjct: 1547 GFSPAYSP-AWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASPATP-QSPGYS 1604
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
P+SP YSP+SPGYSP SP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP
Sbjct: 1605 PTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1664
Query: 392 SYSPTSP 412
SYSPTSP
Sbjct: 1665 SYSPTSP 1671
Score = 145 bits (367), Expect = 1e-33
Identities = 81/127 (63%), Positives = 94/127 (74%), Gaps = 5/127 (3%)
Frame = +2
Query: 47 TPGRSPISGT--PYHEGMM--SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+PG SP S + P G SPSY SP+ SPT+ + +SP ++SPTS P YS
Sbjct: 1600 SPGYSPTSPSYSPTSPGYSPASPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYS 1653
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
P+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP
Sbjct: 1654 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1713
Query: 392 SYSPTSP 412
SYSPTSP
Sbjct: 1714 SYSPTSP 1720
Score = 145 bits (367), Expect = 1e-33
Identities = 79/123 (64%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG SP S + SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1614 SPGYSPASPS---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1664
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1665 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1724
Query: 404 TSP 412
TSP
Sbjct: 1725 TSP 1727
Score = 145 bits (367), Expect = 1e-33
Identities = 78/125 (62%), Positives = 90/125 (72%), Gaps = 1/125 (0%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
G +P S T SPSY SP+ SPT+ + +SP ++SPTS P YSP+
Sbjct: 1616 GYSPASPSYSPTSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPT 1669
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSY
Sbjct: 1670 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1729
Query: 398 SPTSP 412
SPTSP
Sbjct: 1730 SPTSP 1734
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1649 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1702
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1703 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1748
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1656 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1709
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1710 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1755
Score = 141 bits (356), Expect = 2e-32
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1677 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1730
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP YSPTSP+YSPTSPSYSP SP
Sbjct: 1731 PTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSP 1776
Score = 139 bits (350), Expect = 1e-31
Identities = 74/106 (69%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSPSSP YSPTSP YS
Sbjct: 1712 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPSSPKYSPTSPSYS 1765
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSP SP YSP SP+YSPSSP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1766 PTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSP 1811
Score = 137 bits (346), Expect = 3e-31
Identities = 81/139 (58%), Positives = 89/139 (64%), Gaps = 4/139 (2%)
Frame = +2
Query: 8 QLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAF 184
Q PSY G +P S T SPSY SPN S + SP ++
Sbjct: 1774 QSPSYSPGSP-SYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASP-----SY 1827
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSP---GY 355
SPTS P YSPSSP YSP+SP YSPTSP YSP SP YSPTSP YSP+SPTYSP+SP Y
Sbjct: 1828 SPTS-PKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTY 1886
Query: 356 SPTSPAYSPTSPSYSPTSP 412
SPTSP+YSPTSPSYSPTSP
Sbjct: 1887 SPTSPSYSPTSPSYSPTSP 1905
Score = 136 bits (342), Expect = 8e-31
Identities = 71/106 (66%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1684 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1737
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+SP YSP+SP YSPTSP+YSP SPSYSP SP
Sbjct: 1738 PTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSP 1783
Score = 135 bits (341), Expect = 1e-30
Identities = 76/122 (62%), Positives = 91/122 (74%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P SP S + Y G SPSY S + + SPT+ + +SP ++SPTS P +SPSSP
Sbjct: 1768 SPSYSPQSPS-YSPG--SPSYSPS-SPKYSPTSPS-YSPT--SPSYSPTS-PNFSPSSPT 1819
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
YSP+SP YSPTSP YSP+SP YSPTSP YSPTSP YSP+SP YSPTSP YSP+SP+YSPT
Sbjct: 1820 YSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPT 1879
Query: 407 SP 412
SP
Sbjct: 1880 SP 1881
Score = 134 bits (338), Expect = 2e-30
Identities = 68/105 (64%), Positives = 75/105 (71%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP +SP G ++SP SSP YSP+SP YSP+SP YSPTSP +SP
Sbjct: 1761 SPSY--SPTSPSYSPQSPSYSP--GSPSYSP-SSPKYSPTSPSYSPTSPSYSPTSPNFSP 1815
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSP SP YSPTSP YSPSSP YSPTSP YSPTSP YSP SP
Sbjct: 1816 SSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASP 1860
Score = 132 bits (333), Expect = 9e-30
Identities = 69/106 (65%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP +SPTS P YSP+SP YSP SP YSP SP YS
Sbjct: 1733 SPSYSPTSPSY--SPTSPS-YSP--SSPKYSPTS-PSYSPTSPSYSPQSPSYSPGSPSYS 1786
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSPTSP YSPTSP+YSP+SP +SP+SP YSP SPSYSPTSP
Sbjct: 1787 PSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSP 1832
Score = 129 bits (324), Expect = 1e-28
Identities = 76/171 (44%), Positives = 88/171 (51%), Gaps = 41/171 (23%)
Frame = +2
Query: 23 MDGLDFG--------MTPGRSPIS--GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVG 172
M G+ FG M+P +P + TP H M+P P + + FSP
Sbjct: 1497 MPGMLFGAMGSPSQSMSPQMTPWNQGATPMHGSGMTPG---GPGFSPANSESTGFSPAYS 1553
Query: 173 GMAFSPTSSPGY-------------------------------SPSSPGYSPSSPGYSPT 259
SPG +P SPGYSP+SP YSPT
Sbjct: 1554 PAWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPT 1613
Query: 260 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPGYSP SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1614 SPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1664
Score = 127 bits (318), Expect = 5e-28
Identities = 69/112 (61%), Positives = 78/112 (69%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP-------GYSPSSPGYSP 256
SPSY SP + ++SP ++SPTS P YSP SP YSPSSP YSP
Sbjct: 1740 SPSY--SPTSPSYSPSSPKYSPT--SPSYSPTS-PSYSPQSPSYSPGSPSYSPSSPKYSP 1794
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP +SP+SPTYSP+SP YSPTSP YSP+SP YSPTSP
Sbjct: 1795 TSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSP 1846
Score = 72.4 bits (176), Expect = 1e-11
Identities = 45/91 (49%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P S T SP Y SP ++SP +SPTS P YSPSSP
Sbjct: 1821 SPASPSYSPTSPKYSPSSPKY--SPTSPTYSPTSPKYSP--ASPTYSPTS-PKYSPSSPT 1875
Query: 227 YSPSSPG---YSPTSPGYSPTSPGYSPTSPG 310
YSP+SP YSPTSP YSPTSP YSPTSPG
Sbjct: 1876 YSPTSPKGSTYSPTSPSYSPTSPSYSPTSPG 1906
[73][TOP]
>UniRef100_UPI0000E48671 PREDICTED: similar to DNA-directed RNA polymerase II largest subunit
(RPB1) isoform 3 n=1 Tax=Strongylocentrotus purpuratus
RepID=UPI0000E48671
Length = 1921
Score = 150 bits (379), Expect = 4e-35
Identities = 79/124 (63%), Positives = 89/124 (71%), Gaps = 2/124 (1%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPN-LRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
+P SP +P G MSPSY SP+ L SP ++SPTS PGYSP+S
Sbjct: 1573 SPANSPYIPSP--AGPMSPSYSPASPSYLPASPATPQSPGYSPTSPSYSPTS-PGYSPAS 1629
Query: 221 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 400
P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYS
Sbjct: 1630 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1689
Query: 401 PTSP 412
PTSP
Sbjct: 1690 PTSP 1693
Score = 148 bits (374), Expect = 2e-34
Identities = 75/127 (59%), Positives = 90/127 (70%), Gaps = 3/127 (2%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPS---YMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
G +P SP + +P + SP+ Y+ SP +SP+ Y+ +P SPGYS
Sbjct: 1555 GFSPAYSP-AWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASPATP-QSPGYS 1612
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
P+SP YSP+SPGYSP SP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP
Sbjct: 1613 PTSPSYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1672
Query: 392 SYSPTSP 412
SYSPTSP
Sbjct: 1673 SYSPTSP 1679
Score = 145 bits (367), Expect = 1e-33
Identities = 81/127 (63%), Positives = 94/127 (74%), Gaps = 5/127 (3%)
Frame = +2
Query: 47 TPGRSPISGT--PYHEGMM--SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+PG SP S + P G SPSY SP+ SPT+ + +SP ++SPTS P YS
Sbjct: 1608 SPGYSPTSPSYSPTSPGYSPASPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYS 1661
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
P+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP
Sbjct: 1662 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1721
Query: 392 SYSPTSP 412
SYSPTSP
Sbjct: 1722 SYSPTSP 1728
Score = 145 bits (367), Expect = 1e-33
Identities = 79/123 (64%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG SP S + SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1622 SPGYSPASPS---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1672
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1673 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1732
Query: 404 TSP 412
TSP
Sbjct: 1733 TSP 1735
Score = 145 bits (367), Expect = 1e-33
Identities = 78/125 (62%), Positives = 90/125 (72%), Gaps = 1/125 (0%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
G +P S T SPSY SP+ SPT+ + +SP ++SPTS P YSP+
Sbjct: 1624 GYSPASPSYSPTSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPT 1677
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSY
Sbjct: 1678 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1737
Query: 398 SPTSP 412
SPTSP
Sbjct: 1738 SPTSP 1742
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1657 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1710
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1711 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1756
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1664 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1717
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1718 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1763
Score = 141 bits (356), Expect = 2e-32
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1685 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1738
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP YSPTSP+YSPTSPSYSP SP
Sbjct: 1739 PTSPSYSPTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSP 1784
Score = 139 bits (350), Expect = 1e-31
Identities = 74/106 (69%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSPSSP YSPTSP YS
Sbjct: 1720 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPSSPKYSPTSPSYS 1773
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSP SP YSP SP+YSPSSP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1774 PTSPSYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPTSP 1819
Score = 137 bits (346), Expect = 3e-31
Identities = 81/139 (58%), Positives = 89/139 (64%), Gaps = 4/139 (2%)
Frame = +2
Query: 8 QLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAF 184
Q PSY G +P S T SPSY SPN S + SP ++
Sbjct: 1782 QSPSYSPGSP-SYSPSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASP-----SY 1835
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSP---GY 355
SPTS P YSPSSP YSP+SP YSPTSP YSP SP YSPTSP YSP+SPTYSP+SP Y
Sbjct: 1836 SPTS-PKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPTSPKGSTY 1894
Query: 356 SPTSPAYSPTSPSYSPTSP 412
SPTSP+YSPTSPSYSPTSP
Sbjct: 1895 SPTSPSYSPTSPSYSPTSP 1913
Score = 136 bits (342), Expect = 8e-31
Identities = 71/106 (66%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1692 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1745
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+SP YSP+SP YSPTSP+YSP SPSYSP SP
Sbjct: 1746 PTSPSYSPTSPSYSPSSPKYSPTSPSYSPTSPSYSPQSPSYSPGSP 1791
Score = 135 bits (341), Expect = 1e-30
Identities = 76/122 (62%), Positives = 91/122 (74%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P SP S + Y G SPSY S + + SPT+ + +SP ++SPTS P +SPSSP
Sbjct: 1776 SPSYSPQSPS-YSPG--SPSYSPS-SPKYSPTSPS-YSPT--SPSYSPTS-PNFSPSSPT 1827
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
YSP+SP YSPTSP YSP+SP YSPTSP YSPTSP YSP+SP YSPTSP YSP+SP+YSPT
Sbjct: 1828 YSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASPTYSPTSPKYSPSSPTYSPT 1887
Query: 407 SP 412
SP
Sbjct: 1888 SP 1889
Score = 134 bits (338), Expect = 2e-30
Identities = 68/105 (64%), Positives = 75/105 (71%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP +SP G ++SP SSP YSP+SP YSP+SP YSPTSP +SP
Sbjct: 1769 SPSY--SPTSPSYSPQSPSYSP--GSPSYSP-SSPKYSPTSPSYSPTSPSYSPTSPNFSP 1823
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSP SP YSPTSP YSPSSP YSPTSP YSPTSP YSP SP
Sbjct: 1824 SSPTYSPASPSYSPTSPKYSPSSPKYSPTSPTYSPTSPKYSPASP 1868
Score = 132 bits (333), Expect = 9e-30
Identities = 69/106 (65%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP +SPTS P YSP+SP YSP SP YSP SP YS
Sbjct: 1741 SPSYSPTSPSY--SPTSPS-YSP--SSPKYSPTS-PSYSPTSPSYSPQSPSYSPGSPSYS 1794
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSPTSP YSPTSP+YSP+SP +SP+SP YSP SPSYSPTSP
Sbjct: 1795 PSSPKYSPTSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSP 1840
Score = 128 bits (322), Expect = 2e-28
Identities = 80/176 (45%), Positives = 89/176 (50%), Gaps = 46/176 (26%)
Frame = +2
Query: 23 MDGLDFG--------MTPGRSPIS--GTPYHEGMMSP---SYMLSPNLRLSPTNDAQ--F 157
M G+ FG M+P +P + TP H SP S M SP N F
Sbjct: 1497 MPGMLFGAMGSPSQSMSPQMTPWNQGATPMHGASWSPMMGSGMTPGGPGFSPANSESTGF 1556
Query: 158 SPYVGGMAFSPTSSPGY-------------------------------SPSSPGYSPSSP 244
SP SPG +P SPGYSP+SP
Sbjct: 1557 SPAYSPAWSPQPQSPGSPANSPYIPSPAGPMSPSYSPASPSYLPASPATPQSPGYSPTSP 1616
Query: 245 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSPTSPGYSP SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1617 SYSPTSPGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1672
Score = 127 bits (318), Expect = 5e-28
Identities = 69/112 (61%), Positives = 78/112 (69%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP-------GYSPSSPGYSP 256
SPSY SP + ++SP ++SPTS P YSP SP YSPSSP YSP
Sbjct: 1748 SPSY--SPTSPSYSPSSPKYSPT--SPSYSPTS-PSYSPQSPSYSPGSPSYSPSSPKYSP 1802
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP +SP+SPTYSP+SP YSPTSP YSP+SP YSPTSP
Sbjct: 1803 TSPSYSPTSPSYSPTSPNFSPSSPTYSPASPSYSPTSPKYSPSSPKYSPTSP 1854
Score = 72.4 bits (176), Expect = 1e-11
Identities = 45/91 (49%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P S T SP Y SP ++SP +SPTS P YSPSSP
Sbjct: 1829 SPASPSYSPTSPKYSPSSPKY--SPTSPTYSPTSPKYSP--ASPTYSPTS-PKYSPSSPT 1883
Query: 227 YSPSSPG---YSPTSPGYSPTSPGYSPTSPG 310
YSP+SP YSPTSP YSPTSP YSPTSPG
Sbjct: 1884 YSPTSPKGSTYSPTSPSYSPTSPSYSPTSPG 1914
[74][TOP]
>UniRef100_UPI00017B0A92 UPI00017B0A92 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B0A92
Length = 1714
Score = 150 bits (379), Expect = 4e-35
Identities = 80/134 (59%), Positives = 91/134 (67%), Gaps = 6/134 (4%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP N + SP A+ P S GY
Sbjct: 1533 GFSPGYSPAWSPTPGSPGSPGPASP-YIPSPGGAMSP-NYSPTSP-----AYEPRSPGGY 1585
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT------YSPSSPGYSPTSP 370
+P SPGYSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+ YSP+SP YSPTSP
Sbjct: 1586 TPQSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSGPTSPSYSPTSPSYSPTSP 1645
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1646 SYSPTSPSYSPTSP 1659
Score = 122 bits (306), Expect = 1e-26
Identities = 75/159 (47%), Positives = 92/159 (57%), Gaps = 31/159 (19%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
G+ FG P SP+SG TP++ G +P+Y SP+ + +P G FSP+
Sbjct: 1477 GMFFGSAP--SPMSGMSPAMTPWNTGA-TPAYGA-----WSPSVGSGMTP--GAAGFSPS 1526
Query: 194 SSPGYSPSSPGYSPS-------------------------SPGYSPTSPGYSPTSP-GYS 295
++ S SPGYSP+ SP YSPTSP Y P SP GY+
Sbjct: 1527 AASDASGFSPGYSPAWSPTPGSPGSPGPASPYIPSPGGAMSPNYSPTSPAYEPRSPGGYT 1586
Query: 296 PTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SPGYSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1587 PQSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1625
Score = 114 bits (286), Expect = 3e-24
Identities = 77/140 (55%), Positives = 88/140 (62%), Gaps = 24/140 (17%)
Frame = +2
Query: 56 RSPISGTPYHEGMM--SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS-----SPGYS 211
RSP TP G SPSY SP+ SPT+ + +SP ++SPTS SP YS
Sbjct: 1580 RSPGGYTPQSPGYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTSPSGPTSPSYS 1634
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYS------PTSP------GYS-PTSPTYSPSSP- 349
P+SP YSP+SP YSPTSP YSPTSP Y+ PTSP YS PTSPTYSP+SP
Sbjct: 1635 PTSPSYSPTSPSYSPTSPSYSPTSPNYTPPHQLVPTSPYTPHISVYSPPTSPTYSPTSPK 1694
Query: 350 --GYSPTSPAYSPTSPSYSP 403
YSPTSP YSPTSP+YSP
Sbjct: 1695 GSTYSPTSPGYSPTSPTYSP 1714
[75][TOP]
>UniRef100_Q30BD9 DNA-directed RNA polymerase n=1 Tax=Glaucocystis nostochinearum
RepID=Q30BD9_9EUKA
Length = 1852
Score = 150 bits (379), Expect = 4e-35
Identities = 80/137 (58%), Positives = 92/137 (67%), Gaps = 9/137 (6%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVG--GMAFSPTS- 196
G D+ +P SP S + SP Y SP S + + SP ++SPTS
Sbjct: 1551 GFDYAASPSYSPASPS---YSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPSYSPTSP 1607
Query: 197 -----SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
SP YSP+SP YSP+SPGYSPTSP YSPTSP YSPTSP YSPTSP+YSP+SPGYSP
Sbjct: 1608 SYSPTSPAYSPTSPSYSPTSPGYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPGYSP 1667
Query: 362 TSPAYSPTSPSYSPTSP 412
TSP+YSPTSPSYSPTSP
Sbjct: 1668 TSPSYSPTSPSYSPTSP 1684
Score = 145 bits (367), Expect = 1e-33
Identities = 73/105 (69%), Positives = 80/105 (76%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP +SP G +SPTS P YSP+SP YSP+SP YSPTSP YSP
Sbjct: 1606 SPSY--SPTSPAYSPTSPSYSPTSPG--YSPTS-PSYSPTSPRYSPTSPSYSPTSPSYSP 1660
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSPGYSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1661 TSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1705
Score = 144 bits (363), Expect = 3e-33
Identities = 79/123 (64%), Positives = 90/123 (73%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG SP S PSY SP R SPT+ + +SP ++SPTS PGYSP+SP
Sbjct: 1627 SPGYSPTS----------PSYSPTSP--RYSPTSPS-YSPT--SPSYSPTS-PGYSPTSP 1670
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP SPTSP+YSPTSPSYSP
Sbjct: 1671 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSCSPTSPSYSPTSPSYSP 1730
Query: 404 TSP 412
TSP
Sbjct: 1731 TSP 1733
Score = 137 bits (346), Expect = 3e-31
Identities = 79/140 (56%), Positives = 91/140 (65%), Gaps = 10/140 (7%)
Frame = +2
Query: 23 MDGLDFGMTPG--RSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS 196
M D MTP +SP GTP+ +G Y SP + D FSP+ G +SP S
Sbjct: 1493 MTPYDTHMTPALQQSP-GGTPFLDGATFSPYAESPFV------DGSFSPHRG---YSP-S 1541
Query: 197 SPGYSPSSPG--------YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG 352
SP YSP SPG YSP+SP YS SP YSPTSPGYS +SP YSPTSP+YSP+SP
Sbjct: 1542 SPPYSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSPS 1601
Query: 353 YSPTSPAYSPTSPSYSPTSP 412
YSPTSP+YSPTSP+YSPTSP
Sbjct: 1602 YSPTSPSYSPTSPAYSPTSP 1621
Score = 133 bits (335), Expect = 5e-30
Identities = 74/123 (60%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG SP S + SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1662 SPGYSPTSPS---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1712
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
SP+SP YSPTSP YSPTSP YSP+SP SP SPTYSPSSP YSP+SP+YSP+SPSYSP
Sbjct: 1713 SCSPTSPSYSPTSPSYSPTSPSYSPSSPSCSPASPTYSPSSPSYSPSSPSYSPSSPSYSP 1772
Query: 404 TSP 412
+SP
Sbjct: 1773 SSP 1775
Score = 122 bits (305), Expect = 2e-26
Identities = 62/106 (58%), Positives = 76/106 (71%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ + + + SP ++SPTS P YSP+SP YSPSSP SP SP YS
Sbjct: 1697 SPSYSPTSPSYSPTSPSCSPTSP-----SYSPTS-PSYSPTSPSYSPSSPSCSPASPTYS 1750
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSP+SP YSP+SP+YSPSSP YSP+SP Y+P S +YSP SP
Sbjct: 1751 PSSPSYSPSSPSYSPSSPSYSPSSPSYSPSSPQYTPASANYSPPSP 1796
Score = 115 bits (289), Expect = 1e-24
Identities = 65/110 (59%), Positives = 80/110 (72%), Gaps = 6/110 (5%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSPSSP SP+SP YSP+SP YS
Sbjct: 1704 SPSYSPTSPSC--SPTSPS-YSPT--SPSYSPTS-PSYSPSSPSCSPASPTYSPSSPSYS 1757
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP-----TSPSYSPTS 409
P+SP YSP+SP YSP+SP+YSPSSP Y+P S YSP +SP+YSPTS
Sbjct: 1758 PSSPSYSPSSPSYSPSSPSYSPSSPQYTPASANYSPPSPLHSSPAYSPTS 1807
Score = 107 bits (266), Expect = 5e-22
Identities = 61/110 (55%), Positives = 73/110 (66%), Gaps = 6/110 (5%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ S + + SP +SP SSP YSPSSP YSPSSP YSP+SP YS
Sbjct: 1725 SPSYSPTSPSYSPSSPSCSPASP-----TYSP-SSPSYSPSSPSYSPSSPSYSPSSPSYS 1778
Query: 275 PTSPGYSPTSPGYSP-----TSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
P+SP Y+P S YSP +SP YSP+S YSPTSPAY +SP+Y+P S
Sbjct: 1779 PSSPQYTPASANYSPPSPLHSSPAYSPTSQ-YSPTSPAYGASSPAYTPQS 1827
Score = 83.2 bits (204), Expect = 8e-15
Identities = 55/107 (51%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SP+Y SP+ + +SP ++SP SSP YSPSSP Y+P+S YSP SP +S
Sbjct: 1746 SPTY--SPSSPSYSPSSPSYSP--SSPSYSP-SSPSYSPSSPQYTPASANYSPPSPLHS- 1799
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSP---TSPAYSPTSPSYSPTS 409
SP YSPTS YSPTSP Y SSP Y+P SPA P SP+ SP S
Sbjct: 1800 -SPAYSPTSQ-YSPTSPAYGASSPAYTPQSNLSPASLP-SPALSPVS 1843
Score = 79.0 bits (193), Expect = 2e-13
Identities = 50/116 (43%), Positives = 58/116 (50%), Gaps = 23/116 (19%)
Frame = +2
Query: 134 SPT-NDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPG 310
SPT Q +PY M + SPG +P G + S SP G GYSP+SP
Sbjct: 1485 SPTIGSPQMTPYDTHMTPALQQSPGGTPFLDGATFSPYAESPFVDGSFSPHRGYSPSSPP 1544
Query: 311 YSP----------------------TSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSP SP YSP+SPGYS +SP+YSPTSPSYSPTSP
Sbjct: 1545 YSPRSPGFDYAASPSYSPASPSYSAASPRYSPTSPGYSASSPSYSPTSPSYSPTSP 1600
[76][TOP]
>UniRef100_UPI00005A0B26 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 17 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B26
Length = 1684
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1493 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1547
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1548 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1606
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1607 SYSPTSPSYSPTSP 1620
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1570 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1623
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1624 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1669
Score = 134 bits (336), Expect = 4e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1577 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1630
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP+Y+P SP
Sbjct: 1631 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1676
Score = 133 bits (335), Expect = 5e-30
Identities = 61/81 (75%), Positives = 67/81 (82%), Gaps = 1/81 (1%)
Frame = +2
Query: 173 GMAFSPTSSPGYSPSSPG-YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSP 349
G A ++SP Y P SPG Y+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP
Sbjct: 1484 GAAGRESTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP 1543
Query: 350 GYSPTSPAYSPTSPSYSPTSP 412
YSPTSP+YSPTSPSYSPTSP
Sbjct: 1544 SYSPTSPSYSPTSPSYSPTSP 1564
Score = 133 bits (334), Expect = 7e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1584 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1637
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSP+ P Y+PTSP+YSP+SP YSPTSP Y+P SP+YSPTSP
Sbjct: 1638 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1683
Score = 120 bits (300), Expect = 6e-26
Identities = 62/100 (62%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1591 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1644
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
P+ P Y+PTSP YSPTSP+YSP+SP Y+P SP YSPTSP+
Sbjct: 1645 PSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1684
[77][TOP]
>UniRef100_UPI00005A0B25 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 16 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B25
Length = 1752
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1493 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1547
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1548 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1606
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1607 SYSPTSPSYSPTSP 1620
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1570 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1623
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1624 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1669
Score = 133 bits (335), Expect = 5e-30
Identities = 61/81 (75%), Positives = 67/81 (82%), Gaps = 1/81 (1%)
Frame = +2
Query: 173 GMAFSPTSSPGYSPSSPG-YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSP 349
G A ++SP Y P SPG Y+P SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP
Sbjct: 1484 GAAGRESTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP 1543
Query: 350 GYSPTSPAYSPTSPSYSPTSP 412
YSPTSP+YSPTSPSYSPTSP
Sbjct: 1544 SYSPTSPSYSPTSPSYSPTSP 1564
Score = 132 bits (331), Expect = 2e-29
Identities = 70/108 (64%), Positives = 83/108 (76%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1584 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1637
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP--AYSPTSPSYSPTSP 412
PTSP YSP+ P Y+PTSP+YSP+SP YSPTSP YSP+SPSYSPTSP
Sbjct: 1638 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSP 1685
Score = 130 bits (328), Expect = 3e-29
Identities = 69/108 (63%), Positives = 83/108 (76%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1577 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1630
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP--SYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP +YSP+SP
Sbjct: 1631 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSP 1678
Score = 126 bits (316), Expect = 9e-28
Identities = 69/110 (62%), Positives = 84/110 (76%), Gaps = 5/110 (4%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1591 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1644
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPG--YSPTSPAYSPTSPS--YSPTSP 412
P+ P Y+PTSP YSPTSP+YSP+SP YSP+SP+YSPTSP+ YSPTSP
Sbjct: 1645 PSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTSP 1694
Score = 124 bits (312), Expect = 2e-27
Identities = 72/112 (64%), Positives = 83/112 (74%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSP+ P Y+
Sbjct: 1598 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPSRPNYT 1651
Query: 275 PTSPGYSPTSPGYSPTSP--TYSPSSPGYSPTSP--AYSPTS--PSYSPTSP 412
PTSP YSPTSP YSPTSP TYSPSSP YSPTSP YSPTS P+YSPTSP
Sbjct: 1652 PTSPSYSPTSPSYSPTSPNYTYSPSSPSYSPTSPNPKYSPTSPNPTYSPTSP 1703
Score = 122 bits (305), Expect = 2e-26
Identities = 74/115 (64%), Positives = 79/115 (68%), Gaps = 10/115 (8%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGY--SPSSPGYSPTSPG 268
SPSY SPN S N SP ++SPTS P YSP+SP Y SPSSP YSPTSP
Sbjct: 1633 SPSYSPTSPNYSPSRPNYTPTSP-----SYSPTS-PSYSPTSPNYTYSPSSPSYSPTSPN 1686
Query: 269 --YSPTSPG--YSPTSPGYSPTSPTYSPSSPG---YSPTSPAYSPTSPSYSPTSP 412
YSPTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 1687 PKYSPTSPNPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 1741
Score = 99.4 bits (246), Expect = 1e-19
Identities = 61/102 (59%), Positives = 68/102 (66%), Gaps = 7/102 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG--YSPSSPG--YSPTSP 265
SPSY SPT+ + +SP +SP SSP YSP+SP YSP+SP YSPTSP
Sbjct: 1654 SPSY--------SPTSPS-YSPTSPNYTYSP-SSPSYSPTSPNPKYSPTSPNPTYSPTSP 1703
Query: 266 GYSPTSPGYSPTSPG---YSPTSPTYSPSSPGYSPTSPAYSP 382
YSPTSP YSPTSP YSPTSP YSP+SP YS TSPA SP
Sbjct: 1704 KYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1745
Score = 96.3 bits (238), Expect = 1e-18
Identities = 59/112 (52%), Positives = 69/112 (61%), Gaps = 7/112 (6%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS-SPGYSPSS 220
+P R + T SPSY SPN SP++ + +SPTS +P YSP+S
Sbjct: 1644 SPSRPNYTPTSPSYSPTSPSYSPTSPNYTYSPSSPS----------YSPTSPNPKYSPTS 1693
Query: 221 PG--YSPSSPGYSPTSPGYSPTSPG---YSPTSPGYSPTSPTYSPSSPGYSP 361
P YSP+SP YSPTSP YSPTSP YSPTSPGYSPTSPTYS +SP SP
Sbjct: 1694 PNPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1745
[78][TOP]
>UniRef100_UPI00005A0B23 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 14 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B23
Length = 1653
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1462 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1516
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1517 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1575
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1576 SYSPTSPSYSPTSP 1589
Score = 147 bits (370), Expect = 5e-34
Identities = 75/113 (66%), Positives = 83/113 (73%), Gaps = 5/113 (4%)
Frame = +2
Query: 89 GMMSPSYMLSPNLRLSPTNDAQFSPYVGGM-----AFSPTSSPGYSPSSPGYSPSSPGYS 253
G MSPSY SPT+ A GG ++SPTS P YSP+SP YSP+SP YS
Sbjct: 1451 GAMSPSY--------SPTSPAYEPRSPGGYTPQSPSYSPTS-PSYSPTSPSYSPTSPNYS 1501
Query: 254 PTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1502 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1554
Score = 144 bits (364), Expect = 2e-33
Identities = 77/123 (62%), Positives = 90/123 (73%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
M+P SP S P +E SP + SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1453 MSPSYSPTS--PAYEPR-SPGGYTPQSPSYSPTSPS-YSPT--SPSYSPTS-PNYSPTSP 1505
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1506 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1565
Query: 404 TSP 412
TSP
Sbjct: 1566 TSP 1568
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1539 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1592
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPS P Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1593 PTSPSYSPTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSP 1638
Score = 134 bits (336), Expect = 4e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1546 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1599
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+ P Y+P+SP YSPTSP+YSPTSP+Y+P SP
Sbjct: 1600 PTSPSYSPTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSP 1645
Score = 133 bits (334), Expect = 7e-30
Identities = 68/106 (64%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1553 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1606
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSP+ P Y+PTSP+YSP+SP YSPTSP Y+P SP+YSPTSP
Sbjct: 1607 PTSPNYSPSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSP 1652
Score = 120 bits (300), Expect = 6e-26
Identities = 62/100 (62%), Positives = 76/100 (76%), Gaps = 1/100 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1560 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1613
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
P+ P Y+PTSP YSPTSP+YSP+SP Y+P SP YSPTSP+
Sbjct: 1614 PSRPNYTPTSPSYSPTSPSYSPTSPNYTPMSPNYSPTSPN 1653
[79][TOP]
>UniRef100_UPI00005A0B22 PREDICTED: similar to polymerase (RNA) II (DNA directed) polypeptide
A isoform 13 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A0B22
Length = 1722
Score = 150 bits (378), Expect = 6e-35
Identities = 82/134 (61%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G TP S T SPSY SPN SPT+ + +SP ++SP
Sbjct: 1462 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSP 1516
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1517 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1575
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1576 SYSPTSPSYSPTSP 1589
Score = 147 bits (370), Expect = 5e-34
Identities = 75/113 (66%), Positives = 83/113 (73%), Gaps = 5/113 (4%)
Frame = +2
Query: 89 GMMSPSYMLSPNLRLSPTNDAQFSPYVGGM-----AFSPTSSPGYSPSSPGYSPSSPGYS 253
G MSPSY SPT+ A GG ++SPTS P YSP+SP YSP+SP YS
Sbjct: 1451 GAMSPSY--------SPTSPAYEPRSPGGYTPQSPSYSPTS-PSYSPTSPSYSPTSPNYS 1501
Query: 254 PTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1502 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1554
Score = 144 bits (364), Expect = 2e-33
Identities = 77/123 (62%), Positives = 90/123 (73%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
M+P SP S P +E SP + SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1453 MSPSYSPTS--PAYEPR-SPGGYTPQSPSYSPTSPS-YSPT--SPSYSPTS-PNYSPTSP 1505
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1506 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1565
Query: 404 TSP 412
TSP
Sbjct: 1566 TSP 1568
Score = 140 bits (354), Expect = 3e-32
Identities = 72/106 (67%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1518 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1571
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSP+SP
Sbjct: 1572 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPSSP 1617
Score = 140 bits (353), Expect = 4e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1539 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1592
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSPSSP YSPTSP YSPTSP+YSPT+P
Sbjct: 1593 PTSPSYSPTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSPTYSPTTP 1638
Score = 137 bits (346), Expect = 3e-31
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSPSSP YSPTSP YS
Sbjct: 1574 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPSSPKYSPTSPKYS 1627
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 1628 PTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1673
Score = 137 bits (345), Expect = 4e-31
Identities = 71/106 (66%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1546 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1599
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+SP YSP+SP YSPTSP YSPT+P YSPTSP
Sbjct: 1600 PTSPSYSPTSPNYSPSSPKYSPTSPKYSPTSPTYSPTTPKYSPTSP 1645
Score = 135 bits (340), Expect = 1e-30
Identities = 72/106 (67%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSPSSP YSP+SP YSPTSP YS
Sbjct: 1581 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PNYSPSSPKYSPTSPKYSPTSPTYS 1634
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PT+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1635 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSP 1680
Score = 130 bits (326), Expect = 6e-29
Identities = 70/109 (64%), Positives = 80/109 (73%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ + N + SP +SPTS P YSP+SP YSP++P YSPTSP YS
Sbjct: 1595 SPSYSPTSPSYSPTSPNYSPSSP-----KYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYS 1648
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
PTSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 1649 PTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 1697
Score = 128 bits (321), Expect = 2e-28
Identities = 70/109 (64%), Positives = 77/109 (70%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SPN S + SP +SPTS P YSP++P YSP+SP YSPTSP Y+
Sbjct: 1602 SPSYSPTSPNYSPSSPKYSPTSP-----KYSPTS-PTYSPTTPKYSPTSPTYSPTSPVYT 1655
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP---AYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1656 PTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSP 1704
Score = 101 bits (251), Expect = 3e-20
Identities = 58/98 (59%), Positives = 65/98 (66%), Gaps = 3/98 (3%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SP Y SP ++SP +SPTS P Y+P+SP YSP+SP YSPTSP YSP
Sbjct: 1623 SPKY--SPTSPTYSPTTPKYSPT--SPTYSPTS-PVYTPTSPKYSPTSPTYSPTSPKYSP 1677
Query: 278 TSPGYSPTSPG---YSPTSPTYSPSSPGYSPTSPAYSP 382
TSP YSPTSP YSPTSP YSP+SP YS TSPA SP
Sbjct: 1678 TSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1715
Score = 95.1 bits (235), Expect = 2e-18
Identities = 59/109 (54%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNL-RLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P S T SP+Y SP + SPT+ +SP ++PTS P YSP+SP
Sbjct: 1613 SPSSPKYSPTSPKYSPTSPTY--SPTTPKYSPTSPT-YSPT--SPVYTPTS-PKYSPTSP 1666
Query: 224 GYSPSSPGYSPTSPGYSPTSPG---YSPTSPGYSPTSPTYSPSSPGYSP 361
YSP+SP YSPTSP YSPTSP YSPTSPGYSPTSPTYS +SP SP
Sbjct: 1667 TYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1715
[80][TOP]
>UniRef100_Q75A34 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Eremothecium
gossypii RepID=RPB1_ASHGO
Length = 1745
Score = 150 bits (378), Expect = 6e-35
Identities = 80/128 (62%), Positives = 92/128 (71%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G D+G SP SG Y G SP + + SPT+ A +SP ++SPTS P Y
Sbjct: 1515 GADYG--GATSPFSG--YGNGPTSPGFGDVSSPGFSPTSPA-YSPT--SPSYSPTS-PSY 1566
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
SP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1567 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1626
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1627 PSYSPTSP 1634
Score = 147 bits (370), Expect = 5e-34
Identities = 80/134 (59%), Positives = 93/134 (69%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P + D G +P S T SPSY SP+ SPT+ + +SP ++SP
Sbjct: 1535 PGFGDVSSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSP 1589
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1590 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1648
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1649 SYSPTSPSYSPTSP 1662
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1584 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1637
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1638 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1683
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1591 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1644
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1690
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1598 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1651
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1652 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1697
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1605 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1658
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1659 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1612 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1665
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1666 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1619 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1672
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1718
Score = 139 bits (351), Expect = 7e-32
Identities = 72/106 (67%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1626 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1679
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP YSP SP
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPRSP 1725
Score = 134 bits (338), Expect = 2e-30
Identities = 70/104 (67%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1633 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1686
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSP SPSYSP+
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPRSPSYSPS 1730
[81][TOP]
>UniRef100_C4R4Y0 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
RepID=C4R4Y0_PICPG
Length = 1743
Score = 149 bits (377), Expect = 7e-35
Identities = 75/120 (62%), Positives = 84/120 (70%), Gaps = 6/120 (5%)
Frame = +2
Query: 71 GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYS 232
G + G+ SP SP L + A SP F+PTS SPGYSP+SP YS
Sbjct: 1514 GLTEYAGIQSPYQPTSPGLSATSPGFAPTSP-----GFAPTSPRYSPTSPGYSPTSPSYS 1568
Query: 233 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1569 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1628
Score = 140 bits (353), Expect = 4e-32
Identities = 78/123 (63%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG SP S + SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1557 SPGYSPTSPS---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1607
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSP
Sbjct: 1608 SYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSP 1667
Query: 404 TSP 412
TSP
Sbjct: 1668 TSP 1670
Score = 139 bits (350), Expect = 1e-31
Identities = 77/126 (61%), Positives = 88/126 (69%), Gaps = 4/126 (3%)
Frame = +2
Query: 47 TPGRSPISG--TPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
+PG +P S +P G SPSY SPT+ + +SP ++SPTS P YSP
Sbjct: 1543 SPGFAPTSPRYSPTSPGYSPTSPSY--------SPTSPS-YSPT--SPSYSPTS-PSYSP 1590
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP
Sbjct: 1591 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQ 1650
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1651 YSPTSP 1656
Score = 135 bits (341), Expect = 1e-30
Identities = 73/106 (68%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1592 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPQYSPTSPQYSPTSPQYS 1645
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1646 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1691
Score = 135 bits (341), Expect = 1e-30
Identities = 74/106 (69%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ Q+SP +SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1613 SPSYSPTSPSY--SPTSP-QYSPT--SPQYSPTS-PQYSPTSPQYSPTSPQYSPTSPQYS 1666
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1667 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1712
Score = 135 bits (341), Expect = 1e-30
Identities = 74/106 (69%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + SPT+ Q+SP +SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1620 SPSYSPTSP--QYSPTSP-QYSPT--SPQYSPTS-PQYSPTSPQYSPTSPQYSPTSPQYS 1673
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1674 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1719
Score = 135 bits (339), Expect = 2e-30
Identities = 73/106 (68%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1599 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PQYSPTSPQYSPTSPQYSPTSPQYS 1652
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1653 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1698
Score = 130 bits (326), Expect = 6e-29
Identities = 63/99 (63%), Positives = 75/99 (75%), Gaps = 10/99 (10%)
Frame = +2
Query: 146 DAQFSPYV---------GGMA-FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYS 295
D FSP GG+ ++ SP Y P+SPG S +SPG++PTSPG++PTSP YS
Sbjct: 1496 DVMFSPMAETGSGDDRSGGLTEYAGIQSP-YQPTSPGLSATSPGFAPTSPGFAPTSPRYS 1554
Query: 296 PTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSPGYSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1555 PTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1593
Score = 129 bits (325), Expect = 8e-29
Identities = 63/114 (55%), Positives = 74/114 (64%), Gaps = 32/114 (28%)
Frame = +2
Query: 167 VGGMAFSP--------------------------------TSSPGYSPSSPGYSPSSPGY 250
V + FSP +SPG++P+SPG++P+SP Y
Sbjct: 1494 VADVMFSPMAETGSGDDRSGGLTEYAGIQSPYQPTSPGLSATSPGFAPTSPGFAPTSPRY 1553
Query: 251 SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSPGYSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1554 SPTSPGYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1607
Score = 126 bits (317), Expect = 7e-28
Identities = 69/104 (66%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ Q+SP +SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1634 SPQYSPTSP--QYSPTSP-QYSPT--SPQYSPTS-PQYSPTSPQYSPTSPQYSPTSPQYS 1687
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSP SP YSP+
Sbjct: 1688 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPASPQYSPS 1731
Score = 114 bits (284), Expect = 4e-24
Identities = 64/100 (64%), Positives = 72/100 (72%), Gaps = 1/100 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ Q+SP +SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1641 SPQYSPTSP--QYSPTSP-QYSPT--SPQYSPTS-PQYSPTSPQYSPTSPQYSPTSPQYS 1694
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
PTSP YSPTSP YSPTSP YSP+SP YSP SP YSP+ S
Sbjct: 1695 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPASPQYSPSRHS 1734
[82][TOP]
>UniRef100_UPI000151A8B3 hypothetical protein PGUG_01105 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B3
Length = 1018
Score = 149 bits (376), Expect = 9e-35
Identities = 78/132 (59%), Positives = 92/132 (69%), Gaps = 7/132 (5%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------ 196
+G PG SP +P+ G SP+Y SP ++ + SP ++SPTS
Sbjct: 783 YGGQPG-SPSPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSP-----SYSPTSPSYSPT 836
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+Y
Sbjct: 837 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 896
Query: 377 SPTSPSYSPTSP 412
SPTSPSYSPTSP
Sbjct: 897 SPTSPSYSPTSP 908
Score = 98.6 bits (244), Expect = 2e-19
Identities = 54/89 (60%), Positives = 64/89 (71%), Gaps = 1/89 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 837 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 890
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
PTSP YSPTSP YSPTSP+YSP+ P
Sbjct: 891 PTSPSYSPTSPSYSPTSPSYSPTFAKLQP 919
Score = 87.4 bits (215), Expect = 4e-16
Identities = 49/83 (59%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 844 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 897
Query: 275 PTSPGYSPTSPGYSPTSPTYSPS 343
PTSP YSPTSP YSPT P+
Sbjct: 898 PTSPSYSPTSPSYSPTFAKLQPN 920
[83][TOP]
>UniRef100_Q6CL79 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
RepID=Q6CL79_KLULA
Length = 1720
Score = 149 bits (376), Expect = 9e-35
Identities = 79/128 (61%), Positives = 91/128 (71%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G D+G SP SG Y G SP + + SPT+ +SP ++SPTS P Y
Sbjct: 1513 GADYGSAT--SPFSG--YGNGPTSPGFGEVSSPGFSPTSPG-YSPT--SPSYSPTS-PSY 1564
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
SP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1565 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1624
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1625 PSYSPTSP 1632
Score = 145 bits (367), Expect = 1e-33
Identities = 79/123 (64%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG SP S + SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1547 SPGYSPTSPS---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1597
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1598 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1657
Query: 404 TSP 412
TSP
Sbjct: 1658 TSP 1660
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1582 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1635
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1636 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1681
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1589 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1642
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1643 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1688
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1596 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1649
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1650 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1695
Score = 136 bits (343), Expect = 6e-31
Identities = 71/105 (67%), Positives = 82/105 (78%), Gaps = 1/105 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1603 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1656
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP YSP S
Sbjct: 1657 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPGS 1701
Score = 127 bits (319), Expect = 4e-28
Identities = 69/106 (65%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1610 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1663
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSP SYSP P
Sbjct: 1664 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSP--GSYSPAEP 1707
[84][TOP]
>UniRef100_O94231 RNA polymerase II largest subunit (Fragment) n=1 Tax=Kluyveromyces
lactis RepID=O94231_KLULA
Length = 414
Score = 149 bits (376), Expect = 9e-35
Identities = 79/128 (61%), Positives = 91/128 (71%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G D+G SP SG Y G SP + + SPT+ +SP ++SPTS P Y
Sbjct: 207 GADYGSAT--SPFSG--YGNGPTSPGFGEVSSPGFSPTSPG-YSPT--SPSYSPTS-PSY 258
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
SP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 259 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 318
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 319 PSYSPTSP 326
Score = 145 bits (367), Expect = 1e-33
Identities = 79/123 (64%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG SP S + SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 241 SPGYSPTSPS---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 291
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 292 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 351
Query: 404 TSP 412
TSP
Sbjct: 352 TSP 354
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 276 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 329
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 330 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 375
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 283 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 336
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 337 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 382
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 290 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 343
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 344 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 389
Score = 136 bits (343), Expect = 6e-31
Identities = 71/105 (67%), Positives = 82/105 (78%), Gaps = 1/105 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 297 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 350
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP YSP S
Sbjct: 351 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPGS 395
Score = 127 bits (319), Expect = 4e-28
Identities = 69/106 (65%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 304 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 357
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSP SYSP P
Sbjct: 358 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSP--GSYSPAEP 401
[85][TOP]
>UniRef100_A5DCV3 DNA-directed RNA polymerase II subunit RPB1 (Fragments) n=1
Tax=Pichia guilliermondii RepID=RPB1_PICGU
Length = 1579
Score = 149 bits (376), Expect = 9e-35
Identities = 78/132 (59%), Positives = 92/132 (69%), Gaps = 7/132 (5%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------ 196
+G PG SP +P+ G SP+Y SP ++ + SP ++SPTS
Sbjct: 1349 YGGQPG-SPSPTSPFAYGATSPAYGGASPGYGVTSPTYSPTSP-----SYSPTSPSYSPT 1402
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+Y
Sbjct: 1403 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1462
Query: 377 SPTSPSYSPTSP 412
SPTSPSYSPTSP
Sbjct: 1463 SPTSPSYSPTSP 1474
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1403 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1456
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1457 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1502
Score = 142 bits (359), Expect = 9e-33
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1417 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1470
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSPSYSPTSP
Sbjct: 1471 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSP 1516
Score = 142 bits (359), Expect = 9e-33
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1431 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1484
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1485 PTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSP 1530
Score = 142 bits (357), Expect = 2e-32
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1438 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1491
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1492 PTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1537
Score = 140 bits (353), Expect = 4e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1445 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1498
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP YSPTSP
Sbjct: 1499 PTSPLYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP 1544
Score = 140 bits (352), Expect = 6e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1452 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPLYS 1505
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSP+YSPTSP
Sbjct: 1506 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPAYSPTSP 1551
Score = 139 bits (349), Expect = 1e-31
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1459 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPLYSPTSPSYS 1512
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSPAYSPTSP YSP SP
Sbjct: 1513 PTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPAYSPTSPQYSPNSP 1558
Score = 134 bits (338), Expect = 2e-30
Identities = 71/106 (66%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1466 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPLYSPTSPSYSPTSPSYS 1519
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSP SP YSP SP
Sbjct: 1520 PTSPSYSPTSPSYSPTSPQYSPTSPAYSPTSPQYSPNSPQYSPRSP 1565
Score = 126 bits (317), Expect = 7e-28
Identities = 68/103 (66%), Positives = 77/103 (74%), Gaps = 1/103 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1473 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PLYSPTSPSYSPTSPSYSPTSPSYS 1526
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP YSP+SP YSP SP YSP SP YSP
Sbjct: 1527 PTSPSYSPTSPQYSPTSPAYSPTSPQYSPNSPQYSPRSPLYSP 1569
[86][TOP]
>UniRef100_UPI000051AA8E PREDICTED: similar to DNA-directed RNA polymerase II largest
subunit (RPB1) n=1 Tax=Apis mellifera
RepID=UPI000051AA8E
Length = 452
Score = 149 bits (375), Expect = 1e-34
Identities = 75/127 (59%), Positives = 85/127 (66%), Gaps = 3/127 (2%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPS---YMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
G++P S S P G PS Y +SP SP+ Y+ SSP YS
Sbjct: 95 GLSPAYSAYSPQPGSPGSPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSPSITPSSPNYS 154
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
P+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP
Sbjct: 155 PTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 214
Query: 392 SYSPTSP 412
SYSPTSP
Sbjct: 215 SYSPTSP 221
Score = 148 bits (374), Expect = 2e-34
Identities = 75/119 (63%), Positives = 86/119 (72%), Gaps = 1/119 (0%)
Frame = +2
Query: 59 SPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSP 235
SP G SP+Y+ SP++ S N + SP +SPTS P YSP+SP YSP
Sbjct: 123 SPAGGASPSYSPTSPAYLPTSPSITPSSPNYSPTSP-----TYSPTS-PNYSPTSPSYSP 176
Query: 236 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 177 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 235
Score = 144 bits (362), Expect = 4e-33
Identities = 77/123 (62%), Positives = 90/123 (73%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P S T + SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 154 SPTSPTYSPTSPNYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 207
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 208 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 267
Query: 404 TSP 412
TSP
Sbjct: 268 TSP 270
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 178 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 231
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 232 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 277
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 185 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 238
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 239 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 284
Score = 140 bits (352), Expect = 6e-32
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 206 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 259
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP Y+P SP+YSPTSPSYSP+SP
Sbjct: 260 PTSPSYSPTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPSSP 305
Score = 135 bits (340), Expect = 1e-30
Identities = 69/106 (65%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 213 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 266
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+SP Y+P+SP YSPTSP+YSP+SP YSP SP
Sbjct: 267 PTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPSSPQYSPASP 312
Score = 134 bits (337), Expect = 3e-30
Identities = 69/106 (65%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 227 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 280
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP Y+P SP YSPTSP+YSPSSP YSP SP+YSP+SP YSPTSP
Sbjct: 281 PSSPNYTPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSP 326
Score = 134 bits (337), Expect = 3e-30
Identities = 69/106 (65%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSP+SP Y+
Sbjct: 234 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPSSPNYT 287
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSPTSP YSP+SP YSP+SP YSP+SP YSPTSPSYSPTSP
Sbjct: 288 PASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSP 333
Score = 132 bits (332), Expect = 1e-29
Identities = 68/106 (64%), Positives = 78/106 (73%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ S N SP ++SPTS P YSPSSP YSP+SP YSP+SP YS
Sbjct: 269 SPSYSPTSPSYSPSSPNYTPASP-----SYSPTS-PSYSPSSPQYSPASPSYSPSSPKYS 322
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP ++ TSP Y+P+SP YSPTSP YSPTSPSYSP+SP
Sbjct: 323 PTSPSYSPTSPSFAGTSPQYTPASPTYSPTSPTYSPTSPSYSPSSP 368
Score = 131 bits (330), Expect = 2e-29
Identities = 69/106 (65%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSPSSP Y+P SP YS
Sbjct: 241 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPSSPNYTPASPSYS 294
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSP+SP YSP SP+YSPSSP YSPTSP+YSPTSPS++ TSP
Sbjct: 295 PTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSP 340
Score = 125 bits (315), Expect = 1e-27
Identities = 80/176 (45%), Positives = 93/176 (52%), Gaps = 48/176 (27%)
Frame = +2
Query: 29 GLDFGM--TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT--- 193
G+ FG TP SP TP+ +P Y S +SP + +P GG FSP+
Sbjct: 40 GMFFGSVATPSMSP-QMTPWMGA--TPGYGASS---MSPALGSGMTP--GGACFSPSGAS 91
Query: 194 ------------------------------------SSPGYSPSSPGY-------SPSSP 244
+SP YSP+SP Y +PSSP
Sbjct: 92 DASGLSPAYSAYSPQPGSPGSPGPSMSPYPMSPAGGASPSYSPTSPAYLPTSPSITPSSP 151
Query: 245 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 152 NYSPTSPTYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 207
Score = 122 bits (307), Expect = 9e-27
Identities = 68/117 (58%), Positives = 76/117 (64%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
TP S T SPSY SP+ SP + A G +SP SSP YSP+SP
Sbjct: 343 TPASPTYSPTSPTYSPTSPSY--SPS---SPQHTAS-----GSTRYSP-SSPNYSPTSPT 391
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
YSP+SP YSP+S YSPTSP Y+PTSP YSPTSPTYSP PGYSPTSP YSP SP+Y
Sbjct: 392 YSPTSPQYSPSSTKYSPTSPTYTPTSPSYSPTSPTYSPPVPGYSPTSPTYSPASPAY 448
Score = 120 bits (302), Expect = 4e-26
Identities = 69/127 (54%), Positives = 82/127 (64%), Gaps = 5/127 (3%)
Frame = +2
Query: 47 TPGRSPIS----GTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+P SP S GT SP+Y SP SPT+ + +SP + + S YS
Sbjct: 325 SPSYSPTSPSFAGTSPQYTPASPTYSPTSPTY--SPTSPS-YSP--SSPQHTASGSTRYS 379
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
PSSP YSP+SP YSPTSP YSP+S YSPTSP Y+PTSP+YSP+SP YSP P YSPTSP
Sbjct: 380 PSSPNYSPTSPTYSPTSPQYSPSSTKYSPTSPTYTPTSPSYSPTSPTYSPPVPGYSPTSP 439
Query: 392 SYSPTSP 412
+YSP SP
Sbjct: 440 TYSPASP 446
Score = 118 bits (296), Expect = 2e-25
Identities = 67/119 (56%), Positives = 76/119 (63%), Gaps = 15/119 (12%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPG-------YSP 256
SPSY SP + Q+SP ++SP SSP YSP+SP YSP+SP Y+P
Sbjct: 290 SPSY--SPTSPSYSPSSPQYSP--ASPSYSP-SSPKYSPTSPSYSPTSPSFAGTSPQYTP 344
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSP--------TYSPSSPGYSPTSPAYSPTSPSYSPTS 409
SP YSPTSP YSPTSP YSP+SP YSPSSP YSPTSP YSPTSP YSP+S
Sbjct: 345 ASPTYSPTSPTYSPTSPSYSPSSPQHTASGSTRYSPSSPNYSPTSPTYSPTSPQYSPSS 403
[87][TOP]
>UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JYP8_SCHJY
Length = 1748
Score = 149 bits (375), Expect = 1e-34
Identities = 81/134 (60%), Positives = 95/134 (70%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P YM +PG SP S + SP+Y SP+ SPT+ + +SP ++SP
Sbjct: 1534 PGYMSPFSGASSPGFSPSSPS---YSPSSPAYSPTSPSY--SPTSPS-YSPT--SPSYSP 1585
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1586 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1644
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1645 SYSPTSPSYSPTSP 1658
Score = 148 bits (374), Expect = 2e-34
Identities = 82/142 (57%), Positives = 90/142 (63%), Gaps = 27/142 (19%)
Frame = +2
Query: 68 SGTPYHEGMMSPS-YMLSPNLRLSPTNDAQFSPYV-----------GGMA---------- 181
S TPY ++ S YM SP+ DA FSP + G MA
Sbjct: 1482 SATPYERSPLADSGYMGSPD-------DAAFSPLIQTSQDTHDDDYGMMASPYGADARSP 1534
Query: 182 -----FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSS 346
FS SSPG+SPSSP YSPSSP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+S
Sbjct: 1535 GYMSPFSGASSPGFSPSSPSYSPSSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1594
Query: 347 PGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP+YSPTSPSYSPTSP
Sbjct: 1595 PSYSPTSPSYSPTSPSYSPTSP 1616
Score = 147 bits (372), Expect = 3e-34
Identities = 78/126 (61%), Positives = 88/126 (69%)
Frame = +2
Query: 35 DFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
D+GM +PY SP YM SP S + FSP ++SP SSP YSP
Sbjct: 1519 DYGMM-------ASPYGADARSPGYM-SP---FSGASSPGFSP--SSPSYSP-SSPAYSP 1564
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPS
Sbjct: 1565 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1624
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1625 YSPTSP 1630
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1594 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1647
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1648 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1693
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1601 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1654
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1655 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1700
Score = 137 bits (345), Expect = 4e-31
Identities = 71/103 (68%), Positives = 82/103 (79%), Gaps = 1/103 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1608 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1661
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1662 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1704
Score = 132 bits (333), Expect = 9e-30
Identities = 74/119 (62%), Positives = 84/119 (70%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1629 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1682
Query: 275 PTSPGYSPTSPGYSPTSPTYSPS-------------SPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1683 PTSPSYSPTSPSYSPTSPSYSPGHSAQNAQGRMSPRSPVYSPTSPSYSPTSPSYSPTSP 1741
Score = 123 bits (309), Expect = 6e-27
Identities = 69/116 (59%), Positives = 79/116 (68%), Gaps = 14/116 (12%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1636 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1689
Query: 275 PTSPGYSPTSPGYSP-------------TSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSP SP YSP+SP YSPTSP+YSPTSP YSP
Sbjct: 1690 PTSPSYSPTSPSYSPGHSAQNAQGRMSPRSPVYSPTSPSYSPTSPSYSPTSPRYSP 1745
Score = 85.5 bits (210), Expect = 2e-15
Identities = 53/103 (51%), Positives = 62/103 (60%), Gaps = 21/103 (20%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1650 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1703
Query: 275 P--------------------TSPGYSPTSPGYSPTSPTYSPS 343
P TSP YSPTSP YSPTSP YSP+
Sbjct: 1704 PGHSAQNAQGRMSPRSPVYSPTSPSYSPTSPSYSPTSPRYSPN 1746
[88][TOP]
>UniRef100_B7PJA3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
RepID=B7PJA3_IXOSC
Length = 1937
Score = 148 bits (374), Expect = 2e-34
Identities = 80/140 (57%), Positives = 93/140 (66%), Gaps = 16/140 (11%)
Frame = +2
Query: 41 GMTPGRSPISGTP-------YHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVG--GMAFSP 190
G++PG SP G+P Y +SP+Y SP S + SP ++SP
Sbjct: 1564 GLSPGWSPQPGSPASSPASPYIPSPVSPNYSPSSPAYAPSSPSMTPASPTYSPTSPSYSP 1623
Query: 191 TS------SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG 352
TS SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP
Sbjct: 1624 TSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1683
Query: 353 YSPTSPAYSPTSPSYSPTSP 412
YSPTSP+YSPTSPSYSPTSP
Sbjct: 1684 YSPTSPSYSPTSPSYSPTSP 1703
Score = 147 bits (372), Expect = 3e-34
Identities = 79/124 (63%), Positives = 90/124 (72%), Gaps = 1/124 (0%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
MTP S T SPSY SPN SPT+ + +SP ++SPTS P YSP+S
Sbjct: 1607 MTPASPTYSPTSPSYSPTSPSYSPTSPNY--SPTSPS-YSPT--SPSYSPTS-PSYSPTS 1660
Query: 221 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 400
P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYS
Sbjct: 1661 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1720
Query: 401 PTSP 412
P+SP
Sbjct: 1721 PSSP 1724
Score = 140 bits (353), Expect = 4e-32
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1653 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1706
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+SP Y+P+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1707 PTSPSYSPTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSP 1752
Score = 139 bits (349), Expect = 1e-31
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1660 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1713
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSP+SP Y+P SP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1714 PTSPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1759
Score = 138 bits (347), Expect = 2e-31
Identities = 72/106 (67%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSPSSP Y+P+SP YSPTSP YS
Sbjct: 1688 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPSSPNYTPASPSYSPTSPSYS 1741
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP YSP SP+YSP SPSYSP+SP
Sbjct: 1742 PTSPSYSPTSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSSP 1787
Score = 137 bits (344), Expect = 5e-31
Identities = 77/122 (63%), Positives = 90/122 (73%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P SP S + Y G SPSY S + + SPT+ + +SP ++SP SP Y+PSSP
Sbjct: 1765 SPNYSPQSPS-YSPG--SPSYSPS-SPKYSPTSPS-YSPT--SPSYSP-GSPQYTPSSPK 1816
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
YSP+SP YSPTSP YSP+SP YSPTSP YSPTSPTY+PSSP YSPTSP YSPTSP YSPT
Sbjct: 1817 YSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPT 1876
Query: 407 SP 412
SP
Sbjct: 1877 SP 1878
Score = 136 bits (342), Expect = 8e-31
Identities = 70/106 (66%), Positives = 78/106 (73%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ S N SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1709 SPSYSPTSPSYSPSSPNYTPASP-----SYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1762
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSP SP YSP SP+YSPSSP YSPTSP+YSPTSPSYSP SP
Sbjct: 1763 PSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSP 1808
Score = 135 bits (341), Expect = 1e-30
Identities = 79/148 (53%), Positives = 88/148 (59%), Gaps = 13/148 (8%)
Frame = +2
Query: 8 QLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFS 187
Q PSY G +P S T SPSY SP + ++SP +S
Sbjct: 1771 QSPSYSPGSP-SYSPSSPKYSPTSPSYSPTSPSY--SPGSPQYTPSSPKYSPT--SPTYS 1825
Query: 188 PTS-------------SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP 328
PTS SP YSP+SP Y+PSSP YSPTSP YSPTSP YSPTSP YSPTSP
Sbjct: 1826 PTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSP 1885
Query: 329 TYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSPTSP YSPTSP+YSPTSP
Sbjct: 1886 KYSPTSPTYSPTSPKYSPTSPTYSPTSP 1913
Score = 135 bits (339), Expect = 2e-30
Identities = 71/112 (63%), Positives = 83/112 (74%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SP+ SPT+ + +SP ++SP+S SP YSP+SP YSP+SP YSP
Sbjct: 1695 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPSSPNYTPASPSYSPTSPSYSPTSPSYSP 1749
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSP+SP YSP SP+YSP SP YSP+SP YSPTSPSYSPTSP
Sbjct: 1750 TSPSYSPTSPSYSPSSPNYSPQSPSYSPGSPSYSPSSPKYSPTSPSYSPTSP 1801
Score = 134 bits (338), Expect = 2e-30
Identities = 73/122 (59%), Positives = 81/122 (66%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
TP S T SPSY SPT+ + +SP ++SP SSP YSP SP
Sbjct: 1727 TPASPSYSPTSPSYSPTSPSY--------SPTSPS-YSPT--SPSYSP-SSPNYSPQSPS 1774
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
YSP SP YSP+SP YSPTSP YSPTSP YSP SP Y+PSSP YSPTSP YSPTSPSYSP+
Sbjct: 1775 YSPGSPSYSPSSPKYSPTSPSYSPTSPSYSPGSPQYTPSSPKYSPTSPTYSPTSPSYSPS 1834
Query: 407 SP 412
SP
Sbjct: 1835 SP 1836
Score = 134 bits (338), Expect = 2e-30
Identities = 80/136 (58%), Positives = 87/136 (63%), Gaps = 3/136 (2%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
PSY G TP S T SPSY S + + SPT+ +SPT
Sbjct: 1801 PSYSPGSP-QYTPSSPKYSPTSPTYSPTSPSYSPS-SPKYSPTSPK----------YSPT 1848
Query: 194 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
S P Y+PSSP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSPTYSP+SP YSPTSP
Sbjct: 1849 S-PTYTPSSPKYSPTSPQYSPTSPQYSPTSPKYSPTSPKYSPTSPTYSPTSPKYSPTSPT 1907
Query: 374 YSPTSP---SYSPTSP 412
YSPTSP SYSPTSP
Sbjct: 1908 YSPTSPKGSSYSPTSP 1923
Score = 127 bits (320), Expect = 3e-28
Identities = 75/157 (47%), Positives = 90/157 (57%), Gaps = 29/157 (18%)
Frame = +2
Query: 29 GLDFGMTP---GRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQ-FSPYVGGMAFSPTS 196
G+ MTP G +P G+ + G+ S + S +DA +SP G++ +
Sbjct: 1512 GMSPQMTPWGQGATPSYGSGWSPGLGSGMTPGAAGFSPSAASDASGYSPASAGLSPGWSP 1571
Query: 197 SPGY------------------SPSSPGYSPSSPG-------YSPTSPGYSPTSPGYSPT 301
PG SPSSP Y+PSSP YSPTSP YSPTSP YSPT
Sbjct: 1572 QPGSPASSPASPYIPSPVSPNYSPSSPAYAPSSPSMTPASPTYSPTSPSYSPTSPSYSPT 1631
Query: 302 SPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1632 SPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1668
Score = 121 bits (303), Expect = 3e-26
Identities = 68/113 (60%), Positives = 79/113 (69%), Gaps = 8/113 (7%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ S N + SP ++SP SP YSPSSP YSP+SP YSPTSP YS
Sbjct: 1751 SPSYSPTSPSYSPSSPNYSPQSP-----SYSP-GSPSYSPSSPKYSPTSPSYSPTSPSYS 1804
Query: 275 PTSPGYSPTSPGYSPTSP-------TYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP Y+P+SP YSPTSP +YSPSSP YSPTSP YSPTSP+Y+P+SP
Sbjct: 1805 PGSPQYTPSSPKYSPTSPTYSPTSPSYSPSSPKYSPTSPKYSPTSPTYTPSSP 1857
Score = 107 bits (267), Expect = 4e-22
Identities = 64/115 (55%), Positives = 76/115 (66%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P S T SP+Y S + + SPT+ Q+SP +SPTS P YSP+SP
Sbjct: 1832 SPSSPKYSPTSPKYSPTSPTYTPS-SPKYSPTSP-QYSPT--SPQYSPTS-PKYSPTSPK 1886
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
YSP+SP YSPTSP YSPTSP YSPTSP S +YSP+SPGYSP+SP YSPTSP
Sbjct: 1887 YSPTSPTYSPTSPKYSPTSPTYSPTSPKGS----SYSPTSPGYSPSSPTYSPTSP 1937
Score = 75.9 bits (185), Expect = 1e-12
Identities = 51/144 (35%), Positives = 68/144 (47%), Gaps = 36/144 (25%)
Frame = +2
Query: 89 GMMSP-------SYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS-SPGYSPSSP 244
GMM P +P +SP Q +P+ G +P+ G+SP G +P +
Sbjct: 1492 GMMGPLGPGVFFGSAATPLAGMSP----QMTPW--GQGATPSYGSGWSPGLGSGMTPGAA 1545
Query: 245 GYSPTSPGYSPTSPGYSPTS----------------------------PGYSPTSPTYSP 340
G+SP++ + + GYSP S P YSP+SP Y+P
Sbjct: 1546 GFSPSA---ASDASGYSPASAGLSPGWSPQPGSPASSPASPYIPSPVSPNYSPSSPAYAP 1602
Query: 341 SSPGYSPTSPAYSPTSPSYSPTSP 412
SSP +P SP YSPTSPSYSPTSP
Sbjct: 1603 SSPSMTPASPTYSPTSPSYSPTSP 1626
[89][TOP]
>UniRef100_C5E245 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5E245_LACTC
Length = 1740
Score = 148 bits (374), Expect = 2e-34
Identities = 79/128 (61%), Positives = 92/128 (71%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G D+G SP SG Y + SP + + SPT+ A +SP ++SPTS P Y
Sbjct: 1514 GADYG--GASSPFSG--YGDAPTSPGFGGVASPGFSPTSPA-YSPT--SPSYSPTS-PSY 1565
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
SP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1566 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1625
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1626 PSYSPTSP 1633
Score = 145 bits (366), Expect = 1e-33
Identities = 78/125 (62%), Positives = 90/125 (72%), Gaps = 1/125 (0%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
G +P S T SPSY SP+ SPT+ + +SP ++SPTS P YSP+
Sbjct: 1543 GFSPTSPAYSPTSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPT 1596
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSY
Sbjct: 1597 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1656
Query: 398 SPTSP 412
SPTSP
Sbjct: 1657 SPTSP 1661
Score = 145 bits (365), Expect = 2e-33
Identities = 79/123 (64%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG SP S SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1541 SPGFSPTSPA---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1591
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1592 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1651
Query: 404 TSP 412
TSP
Sbjct: 1652 TSP 1654
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1576 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1629
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1630 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1675
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1583 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1636
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1637 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1590 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1643
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1644 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1689
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1597 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1650
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1651 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1696
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1604 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1657
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1658 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1703
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1611 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1664
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1665 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1710
Score = 140 bits (354), Expect = 3e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1618 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1671
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP SP
Sbjct: 1672 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGSP 1717
Score = 138 bits (347), Expect = 2e-31
Identities = 72/106 (67%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1625 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1678
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSP SPSYSP SP
Sbjct: 1679 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGSPSYSPGSP 1724
[90][TOP]
>UniRef100_C5DXL0 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5DXL0_ZYGRC
Length = 1744
Score = 148 bits (374), Expect = 2e-34
Identities = 77/124 (62%), Positives = 89/124 (71%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
G +P S T SPSY P+ SPT+ + +SP ++SPTS P YSP+S
Sbjct: 1537 GFSPSSPTYSPTSPSYSPTSPSYS-PPSPNYSPTSPS-YSPT--SPSYSPTS-PSYSPTS 1591
Query: 221 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 400
P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYS
Sbjct: 1592 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1651
Query: 401 PTSP 412
PTSP
Sbjct: 1652 PTSP 1655
Score = 146 bits (369), Expect = 6e-34
Identities = 78/123 (63%), Positives = 88/123 (71%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG SP S T SPSY SP+ N + SP ++SPTS P YSP+SP
Sbjct: 1535 SPGFSPSSPT---YSPTSPSYSPTSPSYSPPSPNYSPTSP-----SYSPTS-PSYSPTSP 1585
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1586 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1645
Query: 404 TSP 412
TSP
Sbjct: 1646 TSP 1648
Score = 145 bits (365), Expect = 2e-33
Identities = 83/151 (54%), Positives = 95/151 (62%), Gaps = 16/151 (10%)
Frame = +2
Query: 8 QLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQ---FSPYVGGM 178
++ +DG D G TP S +G E + M SP L S + DA F+ Y GG
Sbjct: 1458 KITELVDGQDGGATP-YSNENGLINTEVDVKDELMFSP-LVDSGSTDAMAGGFTAYGGGS 1515
Query: 179 A-------------FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSP 319
A F SSPG+SPSSP YSP+SP YSPTSP YSP SP YSPTSP YSP
Sbjct: 1516 ASFGSYGDAPISPGFGGVSSPGFSPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSP 1575
Query: 320 TSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1576 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1606
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1591 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1644
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1645 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSP 1690
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1605 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1658
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1659 PTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1612 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1665
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1666 PTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1711
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1619 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPNYS 1672
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1673 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1718
Score = 141 bits (355), Expect = 3e-32
Identities = 68/92 (73%), Positives = 75/92 (81%), Gaps = 3/92 (3%)
Frame = +2
Query: 146 DAQFSPYVGGMAFSP---TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYS 316
DA SP GG++ SP SSP YSP+SP YSP+SP YSP SP YSPTSP YSPTSP YS
Sbjct: 1523 DAPISPGFGGVS-SPGFSPSSPTYSPTSPSYSPTSPSYSPPSPNYSPTSPSYSPTSPSYS 1581
Query: 317 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1582 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1613
Score = 139 bits (351), Expect = 7e-32
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1626 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPSYS 1679
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSP SP
Sbjct: 1680 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPGSP 1725
Score = 137 bits (344), Expect = 5e-31
Identities = 71/106 (66%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1633 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPTSPSYSPTSPSYS 1686
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSP SP+YSP+SP
Sbjct: 1687 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPGSPTYSPSSP 1732
[91][TOP]
>UniRef100_P35074 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
briggsae RepID=RPB1_CAEBR
Length = 1853
Score = 148 bits (374), Expect = 2e-34
Identities = 81/135 (60%), Positives = 89/135 (65%), Gaps = 11/135 (8%)
Frame = +2
Query: 41 GMTPG----RSP-ISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS--- 196
GM+PG SP S T H SPSY SPT+ A ++SPTS
Sbjct: 1572 GMSPGVYSPASPGFSMTSPHYSPTSPSY--------SPTSPAHHGQSPVSPSYSPTSPSY 1623
Query: 197 ---SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTS 367
SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSPSSP YSPTS
Sbjct: 1624 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTS 1683
Query: 368 PAYSPTSPSYSPTSP 412
P YSPTSP+YSPTSP
Sbjct: 1684 PTYSPTSPTYSPTSP 1698
Score = 147 bits (370), Expect = 5e-34
Identities = 77/123 (62%), Positives = 92/123 (74%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S + + +SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1596 SPSYSPTSPAHHGQSPVSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1649
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSP+SP YSPTSPTYSP+SP YSPTSP YSPTSP+YSP
Sbjct: 1650 SYSPTSPSYSPTSPSYSPTSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSP 1709
Query: 404 TSP 412
TSP
Sbjct: 1710 TSP 1712
Score = 136 bits (342), Expect = 8e-31
Identities = 80/161 (49%), Positives = 95/161 (59%), Gaps = 39/161 (24%)
Frame = +2
Query: 47 TPGRSPISG--TPYHEGMMSPSYMLSPNLRLSPT----------NDAQFS---------- 160
+P SP + TP + G SP+ +SP+ SP N+ +S
Sbjct: 1503 SPAHSPWNSGVTPNYSGPWSPTGGMSPSAGFSPAGNLDGGASPFNEGGWSPASPGDPLGA 1562
Query: 161 -----PYVGGMA---FSPTS------SPGYSPSSPGYSPSSP---GYSPTSPGYSPTSPG 289
P GGM+ +SP S SP YSP+SP YSP+SP G SP SP YSPTSP
Sbjct: 1563 LSPRTPAYGGMSPGVYSPASPGFSMTSPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPS 1622
Query: 290 YSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1623 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1663
Score = 134 bits (337), Expect = 3e-30
Identities = 78/135 (57%), Positives = 90/135 (66%), Gaps = 11/135 (8%)
Frame = +2
Query: 41 GMTP--GRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSS 199
GM+P G SP +P++EG SP+ P LSP +P GGM S
Sbjct: 1526 GMSPSAGFSPAGNLDGGASPFNEGGWSPASPGDPLGALSPR-----TPAYGGM------S 1574
Query: 200 PG-YSPSSPGYSPSSPGYSPTSPGYSPTSP---GYSPTSPGYSPTSPTYSPSSPGYSPTS 367
PG YSP+SPG+S +SP YSPTSP YSPTSP G SP SP YSPTSP+YSP+SP YSPTS
Sbjct: 1575 PGVYSPASPGFSMTSPHYSPTSPSYSPTSPAHHGQSPVSPSYSPTSPSYSPTSPSYSPTS 1634
Query: 368 PAYSPTSPSYSPTSP 412
P+YSPTSPSYSPTSP
Sbjct: 1635 PSYSPTSPSYSPTSP 1649
Score = 134 bits (336), Expect = 4e-30
Identities = 75/109 (68%), Positives = 84/109 (77%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSPSSP YSP+SP YSPTSP YS
Sbjct: 1641 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPSSPRYSPTSPTYSPTSPTYS 1694
Query: 275 PTSPGYSPTSPGYSPTSPT---YSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+ YSPSSP YSP+SP YSPTSPSYSPTSP
Sbjct: 1695 PTSPTYSPTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSP 1743
Score = 132 bits (333), Expect = 9e-30
Identities = 74/109 (67%), Positives = 84/109 (77%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SP SSP YSP+SP YSP+SP YSPTSP YS
Sbjct: 1648 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSP-SSPRYSPTSPTYSPTSPTYSPTSPTYS 1701
Query: 275 PTSPGYSPTSP---GYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP GYSP+SP YSPSSP YSPTSP+YSPTSP YSPTSP
Sbjct: 1702 PTSPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSP 1750
Score = 131 bits (329), Expect = 3e-29
Identities = 72/109 (66%), Positives = 83/109 (76%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP +SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1655 SPSYSPTSPSY--SPTSPS-YSP--SSPRYSPTS-PTYSPTSPTYSPTSPTYSPTSPTYS 1708
Query: 275 PTSP---GYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP GYSP+SP YSP+SPTYSP+SP YSPTSP YSPTSP YSP+SP
Sbjct: 1709 PTSPSYEGYSPSSPKYSPSSPTYSPTSPSYSPTSPQYSPTSPQYSPSSP 1757
Score = 128 bits (322), Expect = 2e-28
Identities = 73/114 (64%), Positives = 81/114 (71%), Gaps = 9/114 (7%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSP--GYSPSSPGYSPSSPGYSPTSPG 268
SP+Y SP SPT+ +SP +SPTS GYSPSSP YSPSSP YSPTSP
Sbjct: 1683 SPTYSPTSPTY--SPTSPT-YSPT--SPTYSPTSPSYEGYSPSSPKYSPSSPTYSPTSPS 1737
Query: 269 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT------SPAYSPTSPSYSPTSP 412
YSPTSP YSPTSP YSP+SPTY+PSSP Y+PT SP YSPTSP+YSPTSP
Sbjct: 1738 YSPTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRAFSSPQYSPTSPTYSPTSP 1791
Score = 119 bits (299), Expect = 8e-26
Identities = 73/148 (49%), Positives = 84/148 (56%), Gaps = 26/148 (17%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGY 208
+P SP S P +EG S SP+ +SP +SPTS SP Y
Sbjct: 1704 SPTYSPTS--PSYEGYSPSSPKYSPSSPTYSPTSPSYSPT--SPQYSPTSPQYSPSSPTY 1759
Query: 209 SPSSPGYSP------SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY------------ 334
+PSSP Y+P SSP YSPTSP YSPTSP Y+P+SP YSPTSPTY
Sbjct: 1760 TPSSPTYNPTSPRAFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPADQPGTSN 1819
Query: 335 --SPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPSSP YSP+SP YSP SPSYSP+SP
Sbjct: 1820 QYSPSSPTYSPSSPTYSPASPSYSPSSP 1847
Score = 112 bits (279), Expect = 2e-23
Identities = 70/137 (51%), Positives = 85/137 (62%), Gaps = 18/137 (13%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYV-----GGMAFSPTS---- 196
+P SP S T SPSY SP + SPT+ Q+SP ++PTS
Sbjct: 1721 SPKYSPSSPT---YSPTSPSYSPTSP--QYSPTSP-QYSPSSPTYTPSSPTYNPTSPRAF 1774
Query: 197 -SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSP-------TSPGYSPTSPTYSPSSPG 352
SP YSP+SP YSP+SP Y+P+SP YSPTSP Y+P TS YSP+SPTYSPSSP
Sbjct: 1775 SSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPADQPGTSNQYSPSSPTYSPSSPT 1834
Query: 353 YSPTSPAYSPTSPSYSP 403
YSP SP+YSP+SP+Y P
Sbjct: 1835 YSPASPSYSPSSPTYDP 1851
Score = 95.5 bits (236), Expect = 2e-18
Identities = 64/153 (41%), Positives = 73/153 (47%), Gaps = 70/153 (45%)
Frame = +2
Query: 164 YVGGMAFSPTS--SPGYSP----------------------------------SSP---- 223
Y GG A SP+ SP +SP +SP
Sbjct: 1490 YGGGFAGSPSREFSPAHSPWNSGVTPNYSGPWSPTGGMSPSAGFSPAGNLDGGASPFNEG 1549
Query: 224 GYSPSSPG--------------------YSPTSPGYSPTSPGYSPTSPGYSPT------- 322
G+SP+SPG YSP SPG+S TSP YSPTSP YSPT
Sbjct: 1550 GWSPASPGDPLGALSPRTPAYGGMSPGVYSPASPGFSMTSPHYSPTSPSYSPTSPAHHGQ 1609
Query: 323 ---SPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1610 SPVSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1642
Score = 78.2 bits (191), Expect = 3e-13
Identities = 48/98 (48%), Positives = 57/98 (58%), Gaps = 15/98 (15%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGY-------- 250
SP+Y SP SP Q+SP +SPTS P Y+PSSP YSP+SP Y
Sbjct: 1763 SPTYNPTSPRAFSSP----QYSPT--SPTYSPTS-PSYTPSSPQYSPTSPTYTPSPADQP 1815
Query: 251 ------SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSS 346
SP+SP YSP+SP YSP SP YSP+SPTY P +
Sbjct: 1816 GTSNQYSPSSPTYSPSSPTYSPASPSYSPSSPTYDPQN 1853
[92][TOP]
>UniRef100_A7AWJ0 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7AWJ0_BABBO
Length = 1746
Score = 148 bits (373), Expect = 2e-34
Identities = 79/127 (62%), Positives = 92/127 (72%), Gaps = 4/127 (3%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSY-MLSPNLRL-SPTNDAQFSPYVG--GMAFSPTSSPGYS 211
++P +P+S P +SPS M+SP + SPT SP G G +SP +SP YS
Sbjct: 1557 VSPSYAPLSPNPLSPNPLSPSMGMMSPTSPVYSPT-----SPVYGQAGGVYSP-ASPAYS 1610
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
P+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSP
Sbjct: 1611 PTSPLYSPTSPVYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1670
Query: 392 SYSPTSP 412
+YSPTSP
Sbjct: 1671 AYSPTSP 1677
Score = 130 bits (328), Expect = 3e-29
Identities = 71/108 (65%), Positives = 78/108 (72%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSP--G 268
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP G
Sbjct: 1634 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPNLG 1687
Query: 269 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
Y PTSP Y PTSP YSPTSP YSP+SP YSPTSP YSPTSP YSP P
Sbjct: 1688 YLPTSPAYRPTSPAYSPTSPAYSPTSPAYSPTSPVYSPTSPEYSPEDP 1735
Score = 97.8 bits (242), Expect = 3e-19
Identities = 67/130 (51%), Positives = 78/130 (60%), Gaps = 12/130 (9%)
Frame = +2
Query: 59 SPISGTP-YHEGMMSPSYMLS-PNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYS 232
SP+ +P Y MMSP +S P+ SP D + +GG +FSPT SP SP Y+
Sbjct: 1507 SPLPFSPSYAALMMSPIVNVSSPSFVTSPAVDTKA---LGG-SFSPTIMSPQSPVSPSYA 1562
Query: 233 PSSPGYSPTSPGYSPTSPGY---SPTSPGYSPTSP-------TYSPSSPGYSPTSPAYSP 382
P SP +P SP +P SP SPTSP YSPTSP YSP+SP YSPTSP YSP
Sbjct: 1563 PLSP--NPLSP--NPLSPSMGMMSPTSPVYSPTSPVYGQAGGVYSPASPAYSPTSPLYSP 1618
Query: 383 TSPSYSPTSP 412
TSP YSPTSP
Sbjct: 1619 TSPVYSPTSP 1628
[93][TOP]
>UniRef100_B4E3V7 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4E3V7_HUMAN
Length = 1935
Score = 148 bits (373), Expect = 2e-34
Identities = 79/133 (59%), Positives = 92/133 (69%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
P+Y G TP S T SPSY + + SPT+ + +SP ++SPT
Sbjct: 1563 PAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSS-NYSPTSPS-YSPT--SPSYSPT 1618
Query: 194 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
S P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+
Sbjct: 1619 S-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1677
Query: 374 YSPTSPSYSPTSP 412
YSPTSPSYSPTSP
Sbjct: 1678 YSPTSPSYSPTSP 1690
Score = 144 bits (364), Expect = 2e-33
Identities = 78/123 (63%), Positives = 90/123 (73%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P S S T SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1595 SPTSSNYSPTSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1648
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1649 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1708
Query: 404 TSP 412
TSP
Sbjct: 1709 TSP 1711
Score = 143 bits (361), Expect = 5e-33
Identities = 76/129 (58%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G G +P SP G+P G SP Y+ SP +SP+ +SPTS P Y
Sbjct: 1521 GFSPGYSPAWSPTPGSPGSPGPSSP-YIPSPGGAMSPS-------------YSPTS-PAY 1565
Query: 209 SPSSPG-YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
P SPG Y+P SP YSPTSP YSPTSP YSPTS YSPTSP+YSP+SP YSPTSP+YSPT
Sbjct: 1566 EPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSPSYSPT 1625
Query: 386 SPSYSPTSP 412
SPSYSPTSP
Sbjct: 1626 SPSYSPTSP 1634
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1640 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1693
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP Y+PTSP+YSPTSPSYSPTSP
Sbjct: 1694 PTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSP 1739
Score = 140 bits (354), Expect = 3e-32
Identities = 72/106 (67%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP Y+
Sbjct: 1668 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPNYSPTSPNYT 1721
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP Y+P+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1722 PTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSP 1767
Score = 139 bits (350), Expect = 1e-31
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1675 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPNYSPTSPNYTPTSPSYS 1728
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y+PTSP YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1729 PTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSP 1774
Score = 135 bits (341), Expect = 1e-30
Identities = 68/112 (60%), Positives = 80/112 (71%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N SP ++SPTS SP Y+P+SP YSP+SP YSP
Sbjct: 1703 SPSYSPTSPNYSPTSPNYTPTSP-----SYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSP 1757
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSP+SP Y+P SPTY+PSSP YSP+SP+YSPTSP Y+PTSP
Sbjct: 1758 TSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSP 1809
Score = 133 bits (334), Expect = 7e-30
Identities = 66/106 (62%), Positives = 79/106 (74%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ + N + SP ++PTS P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 1696 SPSYSPTSPSYSPTSPNYSPTSPN-----YTPTS-PSYSPTSPSYSPTSPNYTPTSPNYS 1749
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP Y+P SP Y+P+SPSYSP+SP
Sbjct: 1750 PTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSPSSP 1795
Score = 132 bits (332), Expect = 1e-29
Identities = 68/112 (60%), Positives = 79/112 (70%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SPN + N + SP ++SPTS SP YSPSSP Y+P SP Y+P
Sbjct: 1731 SPSYSPTSPNYTPTSPNYSPTSP-----SYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTP 1785
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSP+SP YSPTSP Y+PTSP YSPSSP Y+PTSP +SPTSP YSPTSP
Sbjct: 1786 SSPSYSPSSPSYSPTSPKYTPTSPPYSPSSPEYTPTSPKFSPTSPKYSPTSP 1837
Score = 129 bits (323), Expect = 1e-28
Identities = 60/77 (77%), Positives = 66/77 (85%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
FSPTS P YSP+SP YSP+ P YSPT+P YSPTSP YSPTSP Y+PTSP YSP+SP YSP
Sbjct: 1825 FSPTS-PKYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSP 1883
Query: 362 TSPAYSPTSPSYSPTSP 412
TSP YSPTSP+YSPTSP
Sbjct: 1884 TSPQYSPTSPTYSPTSP 1900
Score = 128 bits (322), Expect = 2e-28
Identities = 66/110 (60%), Positives = 77/110 (70%), Gaps = 5/110 (4%)
Frame = +2
Query: 98 SPSYMLS-----PNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS 262
SPSY S P + +SP ++SPTS P Y+P+SP YSPSSP Y+PTS
Sbjct: 1766 SPSYSPSSPRYTPQSPTYTPSSPSYSP--SSPSYSPTS-PKYTPTSPPYSPSSPEYTPTS 1822
Query: 263 PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P +SPTSP YSPTSP YSPT PTYSP++P YSPTSP YSPTSP Y+PTSP
Sbjct: 1823 PKFSPTSPKYSPTSPKYSPTGPTYSPTTPKYSPTSPTYSPTSPVYTPTSP 1872
Score = 128 bits (322), Expect = 2e-28
Identities = 67/105 (63%), Positives = 81/105 (77%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + SPT+ +++P +SP SSP Y+P+SP +SP+SP YSPTSP YSP
Sbjct: 1787 SPSYSPS-SPSYSPTSP-KYTPT--SPPYSP-SSPEYTPTSPKFSPTSPKYSPTSPKYSP 1841
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
T P YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 1842 TGPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 1886
Score = 128 bits (321), Expect = 2e-28
Identities = 65/105 (61%), Positives = 74/105 (70%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP +SP ++PTS P +SP+SP YSP+SP YSPT P YSP
Sbjct: 1794 SPSY--SPTSPKYTPTSPPYSP--SSPEYTPTS-PKFSPTSPKYSPTSPKYSPTGPTYSP 1848
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
T+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1849 TTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSP 1893
Score = 127 bits (320), Expect = 3e-28
Identities = 74/126 (58%), Positives = 87/126 (69%), Gaps = 4/126 (3%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
TP P S + SP + SP + SPT+ ++SP G +SPT+ P YSP+SP
Sbjct: 1805 TPTSPPYSPSSPEYTPTSPKFSPTSP--KYSPTSP-KYSPT--GPTYSPTT-PKYSPTSP 1858
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG---YSPTSPAYSPTSPS 394
YSP+SP Y+PTSP YSPTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+
Sbjct: 1859 TYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPT 1918
Query: 395 YSPTSP 412
YS TSP
Sbjct: 1919 YSLTSP 1924
Score = 127 bits (318), Expect = 5e-28
Identities = 73/125 (58%), Positives = 85/125 (68%), Gaps = 3/125 (2%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P SP S P + P SP +PT+ +FSP +SPTS P YSP+ P
Sbjct: 1794 SPSYSPTS--PKYTPTSPPYSPSSPEY--TPTSP-KFSPT--SPKYSPTS-PKYSPTGPT 1845
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SY 397
YSP++P YSPTSP YSPTSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +Y
Sbjct: 1846 YSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTY 1905
Query: 398 SPTSP 412
SPTSP
Sbjct: 1906 SPTSP 1910
Score = 124 bits (312), Expect = 2e-27
Identities = 74/126 (58%), Positives = 86/126 (68%), Gaps = 4/126 (3%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P +P S PY SP Y SP + SPT+ ++SP +SPT P YSP++P
Sbjct: 1801 SPKYTPTS-PPYSPS--SPEYTPTSP--KFSPTSP-KYSPT--SPKYSPTG-PTYSPTTP 1851
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP---AYSPTSPS 394
YSP+SP YSPTSP Y+PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP
Sbjct: 1852 KYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTYSPTSPG 1911
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1912 YSPTSP 1917
Score = 117 bits (294), Expect = 3e-25
Identities = 74/166 (44%), Positives = 92/166 (55%), Gaps = 38/166 (22%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
G+ FG P SP+ G TP+++G +P+Y SP+ + +P G FSP+
Sbjct: 1465 GMFFGSAP--SPMGGISPAMTPWNQGA-TPAYGA-----WSPSVGSGMTP--GAAGFSPS 1514
Query: 194 SSPGYSPSSPGYSPS-------------------------SPGYSPTSP--------GYS 274
++ S SPGYSP+ SP YSPTSP GY+
Sbjct: 1515 AASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYT 1574
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSPTSP YSPTSP+YSP+S YSPTSP+YSPTSPSYSPTSP
Sbjct: 1575 PQSPSYSPTSPSYSPTSPSYSPTSSNYSPTSPSYSPTSPSYSPTSP 1620
Score = 102 bits (253), Expect = 2e-20
Identities = 62/115 (53%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
TP S T SP Y SP ++SP +SPTS P Y+P+SP
Sbjct: 1819 TPTSPKFSPTSPKYSPTSPKY--SPTGPTYSPTTPKYSPT--SPTYSPTS-PVYTPTSPK 1873
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPG---YSPTSPTYSPSSPGYSPTSPAYSP 382
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YS TSPA SP
Sbjct: 1874 YSPTSPTYSPTSPQYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 1928
[94][TOP]
>UniRef100_UPI0000F24379 DNA-directed RNA polymerase II largest subunit (RNA polymerase II
subunit 1) (B220) n=1 Tax=Pichia stipitis CBS 6054
RepID=UPI0000F24379
Length = 1739
Score = 147 bits (372), Expect = 3e-34
Identities = 74/120 (61%), Positives = 89/120 (74%), Gaps = 2/120 (1%)
Frame = +2
Query: 59 SPISGTPYHEGMMSPSY--MLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYS 232
SP + +P+ G SPS+ +SP + + + SP ++SPTS P YSP+SP YS
Sbjct: 1519 SPSATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSP-----SYSPTS-PSYSPTSPSYS 1572
Query: 233 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1573 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1632
Score = 146 bits (369), Expect = 6e-34
Identities = 80/125 (64%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
G +P SP S + SPSY SP+ SPT+ A +SP ++SPTS P YSP+
Sbjct: 1545 GTSPSYSPTSPS---YSPTSPSYSPTSPSY--SPTSPA-YSPT--SPSYSPTS-PSYSPT 1595
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSY
Sbjct: 1596 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1655
Query: 398 SPTSP 412
SPTSP
Sbjct: 1656 SPTSP 1660
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1582 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1635
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1636 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1681
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1589 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1642
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1643 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1688
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1596 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1649
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP YSPTSP
Sbjct: 1650 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP 1695
Score = 141 bits (355), Expect = 3e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1603 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1656
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1657 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSP 1702
Score = 140 bits (352), Expect = 6e-32
Identities = 65/95 (68%), Positives = 75/95 (78%), Gaps = 3/95 (3%)
Frame = +2
Query: 137 PTNDAQFSPYVGGM---AFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSP 307
PT+ + SP+ G +F + SPGY +SP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1517 PTSPSATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1576
Query: 308 GYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1577 AYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1611
Score = 139 bits (351), Expect = 7e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1610 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1663
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1664 PTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPLYSPTSP 1709
Score = 139 bits (351), Expect = 7e-32
Identities = 73/106 (68%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1617 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1670
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1671 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPLYSPTSPQYSPTSP 1716
Score = 135 bits (340), Expect = 1e-30
Identities = 72/106 (67%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1624 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1677
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSP SP
Sbjct: 1678 PTSPSYSPTSPQYSPTSPQYSPTSPLYSPTSPQYSPTSPQYSPGSP 1723
Score = 133 bits (335), Expect = 5e-30
Identities = 71/106 (66%), Positives = 80/106 (75%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1631 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1684
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSP SP YSP SP
Sbjct: 1685 PTSPQYSPTSPQYSPTSPLYSPTSPQYSPTSPQYSPGSPEYSPNSP 1730
[95][TOP]
>UniRef100_A3GID7 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
RepID=A3GID7_PICST
Length = 1739
Score = 147 bits (372), Expect = 3e-34
Identities = 74/120 (61%), Positives = 89/120 (74%), Gaps = 2/120 (1%)
Frame = +2
Query: 59 SPISGTPYHEGMMSPSY--MLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYS 232
SP + +P+ G SPS+ +SP + + + SP ++SPTS P YSP+SP YS
Sbjct: 1519 SPSATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSP-----SYSPTS-PSYSPTSPSYS 1572
Query: 233 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1573 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1632
Score = 146 bits (369), Expect = 6e-34
Identities = 80/125 (64%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
G +P SP S + SPSY SP+ SPT+ A +SP ++SPTS P YSP+
Sbjct: 1545 GTSPSYSPTSPS---YSPTSPSYSPTSPSY--SPTSPA-YSPT--SPSYSPTS-PSYSPT 1595
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSY
Sbjct: 1596 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1655
Query: 398 SPTSP 412
SPTSP
Sbjct: 1656 SPTSP 1660
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1582 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1635
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1636 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1681
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1589 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1642
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1643 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1688
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1596 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1649
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP YSPTSP
Sbjct: 1650 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP 1695
Score = 142 bits (357), Expect = 2e-32
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1610 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1663
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSPSYSPTSP
Sbjct: 1664 PTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSP 1709
Score = 140 bits (353), Expect = 4e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1617 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1670
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP+YSPTSP YSPTSP
Sbjct: 1671 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPQYSPTSP 1716
Score = 140 bits (352), Expect = 6e-32
Identities = 65/95 (68%), Positives = 75/95 (78%), Gaps = 3/95 (3%)
Frame = +2
Query: 137 PTNDAQFSPYVGGM---AFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSP 307
PT+ + SP+ G +F + SPGY +SP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1517 PTSPSATSPFSYGSTSPSFGGSVSPGYGGTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1576
Query: 308 GYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1577 AYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1611
Score = 137 bits (344), Expect = 5e-31
Identities = 72/106 (67%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1624 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1677
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSP SP
Sbjct: 1678 PTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPGSP 1723
Score = 134 bits (337), Expect = 3e-30
Identities = 71/106 (66%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1631 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1684
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSP SP YSP SP
Sbjct: 1685 PTSPQYSPTSPQYSPTSPSYSPTSPQYSPTSPQYSPGSPEYSPNSP 1730
[96][TOP]
>UniRef100_A1YIA7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pichia kudriavzevii
RepID=A1YIA7_ISSOR
Length = 1647
Score = 147 bits (372), Expect = 3e-34
Identities = 78/119 (65%), Positives = 89/119 (74%), Gaps = 6/119 (5%)
Frame = +2
Query: 74 TPYHEGMMSPSY-MLSPNL-----RLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSP 235
+P+ G SPSY SP+ SPT+ A +SP A+SPTS P YSP+SP YSP
Sbjct: 1452 SPFGYGATSPSYGPTSPSYGPTSPSYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSP 1507
Query: 236 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1508 TSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1566
Score = 144 bits (362), Expect = 4e-33
Identities = 81/141 (57%), Positives = 90/141 (63%), Gaps = 7/141 (4%)
Frame = +2
Query: 11 LPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFS 187
+ +Y FG T G SPSY SP SPT+ A +SP A+S
Sbjct: 1445 MSAYQPTSPFGYGATSPSYGPTSPSYGPTSPSYSPTSP--AYSPTSPA-YSPT--SPAYS 1499
Query: 188 PTS------SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSP 349
PTS SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP
Sbjct: 1500 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1559
Query: 350 GYSPTSPAYSPTSPSYSPTSP 412
YSPTSP YSPTSP YSPTSP
Sbjct: 1560 SYSPTSPQYSPTSPQYSPTSP 1580
Score = 140 bits (352), Expect = 6e-32
Identities = 74/106 (69%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1495 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPSYSPTSPSYSPTSPSYS 1548
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1549 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1594
Score = 139 bits (350), Expect = 1e-31
Identities = 74/106 (69%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1502 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1555
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1556 PTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1601
Score = 136 bits (342), Expect = 8e-31
Identities = 74/112 (66%), Positives = 82/112 (73%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SP+Y SP SPT+ A +SP ++SPTS SP YSP+SP YSP+SP YSP
Sbjct: 1509 SPAYSPTSP--AYSPTSPA-YSPT--SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1563
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1564 TSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1615
Score = 135 bits (341), Expect = 1e-30
Identities = 73/106 (68%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1530 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPQYSPTSPQYSPTSPQYS 1583
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1584 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1629
Score = 135 bits (339), Expect = 2e-30
Identities = 73/106 (68%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1537 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PQYSPTSPQYSPTSPQYSPTSPQYS 1590
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1591 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1636
Score = 131 bits (329), Expect = 3e-29
Identities = 72/103 (69%), Positives = 79/103 (76%), Gaps = 1/103 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ Q+SP +SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1551 SPSYSPTSPSY--SPTSP-QYSPT--SPQYSPTS-PQYSPTSPQYSPTSPQYSPTSPQYS 1604
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSPSYSP
Sbjct: 1605 PTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPSYSP 1647
[97][TOP]
>UniRef100_UPI00003BD271 hypothetical protein DEHA0A14036g n=1 Tax=Debaryomyces hansenii
CBS767 RepID=UPI00003BD271
Length = 1749
Score = 147 bits (370), Expect = 5e-34
Identities = 77/125 (61%), Positives = 91/125 (72%), Gaps = 7/125 (5%)
Frame = +2
Query: 59 SPISGTPYHEGMMSPSY--MLSPNL-----RLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
SP +P+ G SPS+ + SP SPT+ + +SP ++SPTS P YSP+
Sbjct: 1527 SPSPTSPFSYGATSPSFGGVTSPGYGGTSPTYSPTSPS-YSPT--SPSYSPTS-PSYSPT 1582
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSY
Sbjct: 1583 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1642
Query: 398 SPTSP 412
SPTSP
Sbjct: 1643 SPTSP 1647
Score = 144 bits (364), Expect = 2e-33
Identities = 79/125 (63%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
G +P SP S + SPSY SP+ SPT+ + +SP ++SPTS P YSP+
Sbjct: 1553 GTSPTYSPTSPS---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPT 1603
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSY
Sbjct: 1604 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1663
Query: 398 SPTSP 412
SPTSP
Sbjct: 1664 SPTSP 1668
Score = 144 bits (363), Expect = 3e-33
Identities = 73/129 (56%), Positives = 86/129 (66%)
Frame = +2
Query: 26 DGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
D + F G SPI P +G + + S SP+ + FS +F +SPG
Sbjct: 1494 DKIQFEEGAGFSPIHTAPVSDGSGA---LTSYGGATSPSPTSPFSYGATSPSFGGVTSPG 1550
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
Y +SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPT
Sbjct: 1551 YGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1610
Query: 386 SPSYSPTSP 412
SPSYSPTSP
Sbjct: 1611 SPSYSPTSP 1619
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1583 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1636
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1637 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1590 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1643
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP YSPTSP
Sbjct: 1644 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP 1689
Score = 142 bits (357), Expect = 2e-32
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1604 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1657
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSPSYSPTSP
Sbjct: 1658 PTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSP 1703
Score = 142 bits (357), Expect = 2e-32
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1611 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1664
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1665 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSP 1710
Score = 140 bits (353), Expect = 4e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1618 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1671
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP+YSPTSP YSPTSP
Sbjct: 1672 PTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSP 1717
Score = 139 bits (351), Expect = 7e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1625 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1678
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1679 PTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSP 1724
Score = 136 bits (342), Expect = 8e-31
Identities = 72/106 (67%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1632 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPQYS 1685
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSP YSP SP
Sbjct: 1686 PTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPGSP 1731
Score = 129 bits (325), Expect = 8e-29
Identities = 70/105 (66%), Positives = 79/105 (75%), Gaps = 1/105 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1639 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPQYSPTSPQYS 1692
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSP SP YSP S
Sbjct: 1693 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPGSPLYSPES 1737
Score = 118 bits (296), Expect = 2e-25
Identities = 66/102 (64%), Positives = 75/102 (73%), Gaps = 1/102 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1646 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPQYSPTSPQYSPTSPSYS 1699
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 400
PTSP YSPTSP YSPTSP YSP+SP YSP SP YSP S S S
Sbjct: 1700 PTSPSYSPTSPQYSPTSPQYSPTSPQYSPGSPLYSPESESKS 1741
[98][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
RepID=Q9AXN0_9RHOD
Length = 1746
Score = 147 bits (370), Expect = 5e-34
Identities = 78/134 (58%), Positives = 87/134 (64%), Gaps = 16/134 (11%)
Frame = +2
Query: 59 SPISGTPYHEGMMSPS-----YMLSPNLRLSPTNDAQFSPY--VGGMAFSPTS------- 196
SP + +PY + SP+ Y SP N A SPY G +SP S
Sbjct: 1535 SPFAASPYGDAAFSPTPTSPAYASPYGTAASPFN-AMASPYSRAGNAFYSPRSPSSPGGV 1593
Query: 197 --SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
SPGYSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSPTYSP+SP YSPTSP
Sbjct: 1594 AASPGYSPTSPTYSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSPTYSPTSP 1653
Query: 371 AYSPTSPSYSPTSP 412
YSPTSP YSP+SP
Sbjct: 1654 TYSPTSPMYSPSSP 1667
Score = 131 bits (330), Expect = 2e-29
Identities = 75/146 (51%), Positives = 86/146 (58%), Gaps = 21/146 (14%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYHEGMMSPSYMLSP-----NLRLSPTNDAQFSPYVGGMAFSPTS-- 196
F TP SP +PY + M SP N SP + + +SPTS
Sbjct: 1547 FSPTP-TSPAYASPYGTAASPFNAMASPYSRAGNAFYSPRSPSSPGGVAASPGYSPTSPT 1605
Query: 197 ----SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSPTYSP+SP YSP+
Sbjct: 1606 YSPTSPSYSPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSPTYSPTSPTYSPTSPMYSPS 1665
Query: 365 SPA----------YSPTSPSYSPTSP 412
SPA YSP+SP YSP+SP
Sbjct: 1666 SPAMSPARAGGVSYSPSSPHYSPSSP 1691
Score = 122 bits (307), Expect = 9e-27
Identities = 79/153 (51%), Positives = 92/153 (60%), Gaps = 31/153 (20%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS--------- 196
+PG SP S T SPSY SP+ SPT+ A +SP A+SPTS
Sbjct: 1596 SPGYSPTSPT---YSPTSPSYSPTSPSY--SPTSPA-YSPT--SPAYSPTSPTYSPTSPT 1647
Query: 197 -----------SPGYSPSSPG----------YSPSSPGYSPTSPGYSPTSPGYSPTSPGY 313
SP YSPSSP YSPSSP YSP+SP YSP+SP YSP+SP Y
Sbjct: 1648 YSPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPHYSPSSPQYSPSSPHYSPSSPHY 1707
Query: 314 SPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP+SP YSPSSP YSP+SPAYSP+SP+YSP+SP
Sbjct: 1708 SPSSPQYSPSSPQYSPSSPAYSPSSPAYSPSSP 1740
Score = 118 bits (296), Expect = 2e-25
Identities = 63/120 (52%), Positives = 76/120 (63%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P SP S T SP+Y SP +SP M+ + YSPSSP
Sbjct: 1631 SPAYSPTSPT---YSPTSPTY--SPTSPTYSPTSPMYSPSSPAMSPARAGGVSYSPSSPH 1685
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
YSPSSP YSP+SP YSP+SP YSP+SP YSP+SP YSPSSP YSP+SPAYSP+SP++ T
Sbjct: 1686 YSPSSPQYSPSSPHYSPSSPHYSPSSPQYSPSSPQYSPSSPAYSPSSPAYSPSSPAHPST 1745
Score = 107 bits (268), Expect = 3e-22
Identities = 69/160 (43%), Positives = 77/160 (48%), Gaps = 45/160 (28%)
Frame = +2
Query: 68 SGTPYHE--GMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSP-- 235
S TPY G +PSY +P QFSP+ A SP +SP+ P
Sbjct: 1510 SMTPYPATPGQATPSYPYTPI-------GGQFSPF----AASPYGDAAFSPT-----PTS 1553
Query: 236 -----------------------------------------SSPGYSPTSPGYSPTSPGY 292
+SPGYSPTSP YSPTSP Y
Sbjct: 1554 PAYASPYGTAASPFNAMASPYSRAGNAFYSPRSPSSPGGVAASPGYSPTSPTYSPTSPSY 1613
Query: 293 SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSP YSPTSP YSP+SP YSPTSP YSPTSP+YSPTSP
Sbjct: 1614 SPTSPSYSPTSPAYSPTSPAYSPTSPTYSPTSPTYSPTSP 1653
[99][TOP]
>UniRef100_B5RSM9 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
RepID=B5RSM9_DEBHA
Length = 1749
Score = 147 bits (370), Expect = 5e-34
Identities = 77/125 (61%), Positives = 91/125 (72%), Gaps = 7/125 (5%)
Frame = +2
Query: 59 SPISGTPYHEGMMSPSY--MLSPNL-----RLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
SP +P+ G SPS+ + SP SPT+ + +SP ++SPTS P YSP+
Sbjct: 1527 SPSPTSPFSYGATSPSFGGVTSPGYGGTSPTYSPTSPS-YSPT--SPSYSPTS-PSYSPT 1582
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSY
Sbjct: 1583 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1642
Query: 398 SPTSP 412
SPTSP
Sbjct: 1643 SPTSP 1647
Score = 144 bits (364), Expect = 2e-33
Identities = 79/125 (63%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
G +P SP S + SPSY SP+ SPT+ + +SP ++SPTS P YSP+
Sbjct: 1553 GTSPTYSPTSPS---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPT 1603
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSY
Sbjct: 1604 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1663
Query: 398 SPTSP 412
SPTSP
Sbjct: 1664 SPTSP 1668
Score = 144 bits (363), Expect = 3e-33
Identities = 73/129 (56%), Positives = 86/129 (66%)
Frame = +2
Query: 26 DGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
D + F G SPI P +G + + S SP+ + FS +F +SPG
Sbjct: 1494 DKIQFEEGAGFSPIHTAPVSDGSGA---LTSYGGATSPSPTSPFSYGATSPSFGGVTSPG 1550
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
Y +SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPT
Sbjct: 1551 YGGTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1610
Query: 386 SPSYSPTSP 412
SPSYSPTSP
Sbjct: 1611 SPSYSPTSP 1619
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1583 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1636
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1637 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1682
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1590 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1643
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP YSPTSP
Sbjct: 1644 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP 1689
Score = 142 bits (357), Expect = 2e-32
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1604 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1657
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSPSYSPTSP
Sbjct: 1658 PTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSP 1703
Score = 142 bits (357), Expect = 2e-32
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1611 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1664
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1665 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSP 1710
Score = 140 bits (353), Expect = 4e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1618 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1671
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP+YSPTSP YSPTSP
Sbjct: 1672 PTSPSYSPTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSP 1717
Score = 139 bits (351), Expect = 7e-32
Identities = 73/106 (68%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1625 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1678
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1679 PTSPQYSPTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSP 1724
Score = 136 bits (342), Expect = 8e-31
Identities = 72/106 (67%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1632 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPQYS 1685
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSP YSP SP
Sbjct: 1686 PTSPQYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPGSP 1731
Score = 132 bits (331), Expect = 2e-29
Identities = 71/105 (67%), Positives = 80/105 (76%), Gaps = 1/105 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1639 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPQYSPTSPQYS 1692
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSP SPSYSP S
Sbjct: 1693 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPGSPSYSPES 1737
Score = 119 bits (298), Expect = 1e-25
Identities = 66/102 (64%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1646 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPQYSPTSPQYSPTSPSYS 1699
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 400
PTSP YSPTSP YSPTSP YSP+SP YSP SP+YSP S S S
Sbjct: 1700 PTSPSYSPTSPQYSPTSPQYSPTSPQYSPGSPSYSPESESKS 1741
[100][TOP]
>UniRef100_Q6FQS9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
RepID=Q6FQS9_CANGA
Length = 1715
Score = 146 bits (369), Expect = 6e-34
Identities = 70/92 (76%), Positives = 77/92 (83%), Gaps = 3/92 (3%)
Frame = +2
Query: 146 DAQFSPYVGGMA---FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYS 316
DA SP GG++ FSPTS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YS
Sbjct: 1528 DAPASPGFGGVSSPGFSPTS-PAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1586
Query: 317 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1587 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1618
Score = 145 bits (366), Expect = 1e-33
Identities = 78/125 (62%), Positives = 90/125 (72%), Gaps = 1/125 (0%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
G +P S T SPSY SP+ SPT+ + +SP ++SPTS P YSP+
Sbjct: 1542 GFSPTSPAYSPTSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPT 1595
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSY
Sbjct: 1596 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1655
Query: 398 SPTSP 412
SPTSP
Sbjct: 1656 SPTSP 1660
Score = 145 bits (365), Expect = 2e-33
Identities = 79/123 (64%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG SP S SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1540 SPGFSPTSPA---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1590
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1591 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1650
Query: 404 TSP 412
TSP
Sbjct: 1651 TSP 1653
Score = 144 bits (362), Expect = 4e-33
Identities = 72/111 (64%), Positives = 84/111 (75%)
Frame = +2
Query: 80 YHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 259
Y + SP + + SPT+ A +SP ++SPTS P YSP+SP YSP+SP YSPT
Sbjct: 1526 YGDAPASPGFGGVSSPGFSPTSPA-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPT 1581
Query: 260 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1582 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1632
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1575 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1628
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1629 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1674
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1582 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1635
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1636 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1681
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1589 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1642
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1643 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1688
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1596 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1649
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1650 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1695
Score = 140 bits (354), Expect = 3e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1603 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1656
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP SP
Sbjct: 1657 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGSP 1702
Score = 135 bits (339), Expect = 2e-30
Identities = 77/148 (52%), Positives = 90/148 (60%), Gaps = 19/148 (12%)
Frame = +2
Query: 26 DGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQ--------FSPYVG--- 172
DG D G TP + G+++ + L SP DA F+ Y G
Sbjct: 1464 DGQDGGATPYSN-------EAGLVNTDIDVKDELMFSPLVDAGSSDAMSGGFTAYGGAEY 1516
Query: 173 GMAFSPTSSPGYSP--------SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP 328
G A SP + G +P SSPG+SP+SP YSPTSP YSPTSP YSPTSP YSPTSP
Sbjct: 1517 GGATSPFGAYGDAPASPGFGGVSSPGFSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSP 1576
Query: 329 TYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1577 SYSPTSPSYSPTSPSYSPTSPSYSPTSP 1604
Score = 133 bits (335), Expect = 5e-30
Identities = 69/103 (66%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1610 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1663
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSP SP+YSP
Sbjct: 1664 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGSPTYSP 1706
[101][TOP]
>UniRef100_A7S8F9 DNA-directed RNA polymerase n=1 Tax=Nematostella vectensis
RepID=A7S8F9_NEMVE
Length = 1929
Score = 146 bits (368), Expect = 8e-34
Identities = 79/123 (64%), Positives = 93/123 (75%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG SP S + + SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1617 SPGYSPSSPSSGYSPA-SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1669
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1670 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1729
Query: 404 TSP 412
TSP
Sbjct: 1730 TSP 1732
Score = 145 bits (367), Expect = 1e-33
Identities = 78/125 (62%), Positives = 90/125 (72%), Gaps = 1/125 (0%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
G +P S T SPSY SP+ SPT+ + +SP ++SPTS P YSP+
Sbjct: 1628 GYSPASPSYSPTSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPT 1681
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSY
Sbjct: 1682 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 1741
Query: 398 SPTSP 412
SPTSP
Sbjct: 1742 SPTSP 1746
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1661 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1714
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1715 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1760
Score = 142 bits (359), Expect = 9e-33
Identities = 77/128 (60%), Positives = 89/128 (69%), Gaps = 6/128 (4%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSP-NLRLSPTND--AQFSPYVGGMAFSPT---SSPGY 208
+PG SP S M S +SP + SPT+ + SP G SP+ +SP Y
Sbjct: 1589 SPGYSPSS-----PAFMPSSPSMSPASPSYSPTSPGYSPSSPSSGYSPASPSYSPTSPSY 1643
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
SP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS
Sbjct: 1644 SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1703
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1704 PSYSPTSP 1711
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1668 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1721
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1722 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSP 1767
Score = 140 bits (353), Expect = 4e-32
Identities = 72/106 (67%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1675 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1728
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSP+SPSYSP+SP
Sbjct: 1729 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSP 1774
Score = 138 bits (347), Expect = 2e-31
Identities = 71/106 (66%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1682 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1735
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSP+SP+YSP+SPSYSP SP
Sbjct: 1736 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSP 1781
Score = 137 bits (344), Expect = 5e-31
Identities = 86/154 (55%), Positives = 97/154 (62%), Gaps = 30/154 (19%)
Frame = +2
Query: 41 GMTPG------RSPISGTPYHEGMMSPSYMLSPNLR---LSPTNDAQFSPYVGGMA---- 181
GM+PG SP G+P G SP Y+ SP SP++ A F P M+
Sbjct: 1554 GMSPGGFSPSWMSPTPGSPVSPGPTSP-YIPSPAAASPGYSPSSPA-FMPSSPSMSPASP 1611
Query: 182 -FSPTSSPGYSPSSP--GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY------ 334
+SPTS PGYSPSSP GYSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+Y
Sbjct: 1612 SYSPTS-PGYSPSSPSSGYSPASPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1670
Query: 335 --------SPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1671 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1704
Score = 134 bits (338), Expect = 2e-30
Identities = 72/107 (67%), Positives = 84/107 (78%), Gaps = 2/107 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1689 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1742
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY-SPTSP 412
PTSP YSPTSP YSPTSP+YSPSSP YSP+SP+YSP SPSY SP+SP
Sbjct: 1743 PTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPQSPSYASPSSP 1789
Score = 133 bits (335), Expect = 5e-30
Identities = 66/105 (62%), Positives = 77/105 (73%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY + + SP + + +SP +SPTS P YSP+SP YSPSSP YSPTSP Y+P
Sbjct: 1780 SPSYASPSSPKYSPASPS-YSPT--SPKYSPTS-PNYSPASPSYSPSSPKYSPTSPSYTP 1835
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSP SP YSP+SP+YSPSSP Y+PTSP YSPTSP YSP SP
Sbjct: 1836 ASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASP 1880
Score = 131 bits (330), Expect = 2e-29
Identities = 63/105 (60%), Positives = 78/105 (74%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ + +SP +++ SSP YSP+SP YSP+SP YSPTSP YSP
Sbjct: 1759 SPSY--SPSSPSYSPSSPSYSPQ--SPSYASPSSPKYSPASPSYSPTSPKYSPTSPNYSP 1814
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSP+SP YSPTSP+Y+P+SP YSP SP+YSP+SPSYSP+SP
Sbjct: 1815 ASPSYSPSSPKYSPTSPSYTPASPSYSPASPSYSPSSPSYSPSSP 1859
Score = 123 bits (309), Expect = 6e-27
Identities = 68/127 (53%), Positives = 85/127 (66%), Gaps = 6/127 (4%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNL-----RLSPTNDAQFSPYVGGMAFSPTSSPGY 208
+P SP S P + SP Y SP+ + SPT+ +SP ++SP SSP Y
Sbjct: 1773 SPSYSPQS--PSYASPSSPKYSPASPSYSPTSPKYSPTSP-NYSP--ASPSYSP-SSPKY 1826
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
SP+SP Y+P+SP YSP SP YSP+SP YSP+SP Y+PTSP YSP+SP YSP SP YSPT+
Sbjct: 1827 SPTSPSYTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSPTT 1886
Query: 389 PSYSPTS 409
PSY+P S
Sbjct: 1887 PSYTPMS 1893
Score = 118 bits (296), Expect = 2e-25
Identities = 69/121 (57%), Positives = 82/121 (67%), Gaps = 16/121 (13%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1710 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1763
Query: 275 PTSPGYSPTSPGYSPTSP---------------TYSPSSPGYSPTSPAYSPTSPSYSPTS 409
P+SP YSP+SP YSP SP +YSP+SP YSPTSP YSP SPSYSP+S
Sbjct: 1764 PSSPSYSPSSPSYSPQSPSYASPSSPKYSPASPSYSPTSPKYSPTSPNYSPASPSYSPSS 1823
Query: 410 P 412
P
Sbjct: 1824 P 1824
Score = 114 bits (284), Expect = 4e-24
Identities = 63/132 (47%), Positives = 79/132 (59%)
Frame = +2
Query: 8 QLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFS 187
Q PSY +P S T SP+Y SP + + +SP +S
Sbjct: 1779 QSPSYASPSSPKYSPASPSYSPTSPKYSPTSPNY--------SPASPS-YSP--SSPKYS 1827
Query: 188 PTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTS 367
PTS P Y+P+SP YSP+SP YSP+SP YSP+SP Y+PTSP YSPTSP YSP+SP YSPT+
Sbjct: 1828 PTS-PSYTPASPSYSPASPSYSPSSPSYSPSSPRYTPTSPQYSPTSPKYSPASPNYSPTT 1886
Query: 368 PAYSPTSPSYSP 403
P+Y+P S P
Sbjct: 1887 PSYTPMSGHIVP 1898
Score = 94.4 bits (233), Expect = 4e-18
Identities = 67/140 (47%), Positives = 83/140 (59%), Gaps = 12/140 (8%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG--TPYHEGMMSPSYM--LSPNLRLSPT-NDAQFSPYVGGMAFSPT 193
G+ FG S +S TP++ G +P+YM SP + T A FSP A S
Sbjct: 1498 GVFFGAAGSPSAMSPQMTPWNMGA-TPAYMEAWSPGMGSGMTPGAASFSPSAASDA-SGM 1555
Query: 194 SSPGYSPS----SPGYSPSSPG-YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 358
S G+SPS +PG SP SPG SP P + SPGYSP+SP + P+SP+ SP+SP YS
Sbjct: 1556 SPGGFSPSWMSPTPG-SPVSPGPTSPYIPSPAAASPGYSPSSPAFMPSSPSMSPASPSYS 1614
Query: 359 PTSPAYSPTSPS--YSPTSP 412
PTSP YSP+SPS YSP SP
Sbjct: 1615 PTSPGYSPSSPSSGYSPASP 1634
[102][TOP]
>UniRef100_C4Y5N3 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4Y5N3_CLAL4
Length = 281
Score = 146 bits (368), Expect = 8e-34
Identities = 80/127 (62%), Positives = 91/127 (71%), Gaps = 4/127 (3%)
Frame = +2
Query: 44 MTPGRSPIS---GTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
MT SP S +P G SP Y SP SPT+ + +SP ++SPTS P YS
Sbjct: 52 MTSPTSPFSYGGASPAFGGATSPGYGGTSPTY--SPTSPS-YSPT--SPSYSPTS-PSYS 105
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
P+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP
Sbjct: 106 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 165
Query: 392 SYSPTSP 412
SYSPTSP
Sbjct: 166 SYSPTSP 172
Score = 144 bits (364), Expect = 2e-33
Identities = 79/125 (63%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
G +P SP S + SPSY SP+ SPT+ + +SP ++SPTS P YSP+
Sbjct: 78 GTSPTYSPTSPS---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPT 128
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSY
Sbjct: 129 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY 188
Query: 398 SPTSP 412
SPTSP
Sbjct: 189 SPTSP 193
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 108 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 161
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 162 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 207
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 115 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 168
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 169 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 214
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 122 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 175
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 176 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 221
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 129 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 182
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 183 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 228
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 136 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 189
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 190 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 235
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 143 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 196
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 197 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 242
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 150 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 203
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 204 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 249
Score = 142 bits (357), Expect = 2e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 157 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 210
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP YSPTSP
Sbjct: 211 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSP 256
Score = 138 bits (348), Expect = 2e-31
Identities = 72/106 (67%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 164 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 217
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSP YSP SP
Sbjct: 218 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPGSP 263
Score = 137 bits (344), Expect = 5e-31
Identities = 72/106 (67%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 171 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 224
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSP SPSYSP SP
Sbjct: 225 PTSPSYSPTSPSYSPTSPSYSPTSPQYSPTSPQYSPGSPSYSPRSP 270
Score = 126 bits (317), Expect = 7e-28
Identities = 67/101 (66%), Positives = 77/101 (76%), Gaps = 1/101 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 178 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 231
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
PTSP YSPTSP YSPTSP YSP+SP YSP SP+YSP SPSY
Sbjct: 232 PTSPSYSPTSPSYSPTSPQYSPTSPQYSPGSPSYSPRSPSY 272
[103][TOP]
>UniRef100_C4VAM1 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
RepID=C4VAM1_NOSCE
Length = 1612
Score = 145 bits (367), Expect = 1e-33
Identities = 77/115 (66%), Positives = 90/115 (78%), Gaps = 1/115 (0%)
Frame = +2
Query: 71 GTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPG 247
G+P + G SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP
Sbjct: 1447 GSPSY-GSASPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPS 1499
Query: 248 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1500 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1554
Score = 144 bits (363), Expect = 3e-33
Identities = 74/124 (59%), Positives = 86/124 (69%), Gaps = 6/124 (4%)
Frame = +2
Query: 59 SPISGTP-YHEGMMSPSYML-----SPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
SP+S + G SP+Y+ SP L L + ++SPTS P YSP+S
Sbjct: 1413 SPVSESQSISSGNWSPAYLAEESKYSPKLSLFSVGSPSYGS--ASPSYSPTS-PSYSPTS 1469
Query: 221 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 400
P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYS
Sbjct: 1470 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1529
Query: 401 PTSP 412
PTSP
Sbjct: 1530 PTSP 1533
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1469 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1522
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1523 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1568
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1476 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1529
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1530 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1575
Score = 140 bits (354), Expect = 3e-32
Identities = 73/105 (69%), Positives = 84/105 (80%), Gaps = 1/105 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1483 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1536
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTS
Sbjct: 1537 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS 1581
Score = 139 bits (351), Expect = 7e-32
Identities = 73/106 (68%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1490 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1543
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTS SYSPTSP
Sbjct: 1544 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSLSYSPTSP 1589
Score = 135 bits (340), Expect = 1e-30
Identities = 71/104 (68%), Positives = 82/104 (78%), Gaps = 1/104 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1497 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1550
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
PTSP YSPTSP YSPTSP+YSP+SP YSPTS +YSPTSPSYSPT
Sbjct: 1551 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSLSYSPTSPSYSPT 1594
[104][TOP]
>UniRef100_C8Z6G2 Rpo21p n=1 Tax=Saccharomyces cerevisiae EC1118 RepID=C8Z6G2_YEAST
Length = 1733
Score = 145 bits (366), Expect = 1e-33
Identities = 80/134 (59%), Positives = 92/134 (68%), Gaps = 6/134 (4%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS---- 196
G D+G SP Y E SP + +S + SPT+ +SP A+SPTS
Sbjct: 1513 GADYG--EATSPFGA--YGEAPTSPGFGVS-SPGFSPTSPT-YSPT--SPAYSPTSPSYS 1564
Query: 197 --SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1565 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1624
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1625 SYSPTSPSYSPTSP 1638
Score = 145 bits (365), Expect = 2e-33
Identities = 79/126 (62%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
Frame = +2
Query: 38 FGMT-PGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
FG++ PG SP S T SP+Y SPT+ + +SP ++SPTS P YSP
Sbjct: 1535 FGVSSPGFSPTSPT---YSPTSPAY--------SPTSPS-YSPT--SPSYSPTS-PSYSP 1579
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPS
Sbjct: 1580 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1639
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1640 YSPTSP 1645
Score = 144 bits (364), Expect = 2e-33
Identities = 75/106 (70%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1574 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1627
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSPAYSPTSPSYSPTSP
Sbjct: 1628 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSP 1673
Score = 144 bits (363), Expect = 3e-33
Identities = 85/149 (57%), Positives = 96/149 (64%), Gaps = 20/149 (13%)
Frame = +2
Query: 26 DGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQ---FSPYVG---GMAFS 187
DG D G+TP S SG + + M SP L S +NDA F+ Y G G A S
Sbjct: 1464 DGQDGGVTP-YSNESGLVNADLDVKDELMFSP-LVDSGSNDAMAGGFTAYGGADYGEATS 1521
Query: 188 P--------------TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTS 325
P SSPG+SP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTS
Sbjct: 1522 PFGAYGEAPTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTS 1581
Query: 326 PTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1582 PSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1610
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1581 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1634
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1635 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1680
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1595 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1648
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1649 PTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1694
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1602 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1655
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1656 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1701
Score = 142 bits (358), Expect = 1e-32
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1609 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPAYS 1662
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSPSYSPTSP
Sbjct: 1663 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP 1708
Score = 139 bits (350), Expect = 1e-31
Identities = 72/106 (67%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1616 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPAYSPTSPSYS 1669
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP YSP SP
Sbjct: 1670 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSP 1715
Score = 132 bits (333), Expect = 9e-30
Identities = 69/103 (66%), Positives = 79/103 (76%), Gaps = 1/103 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1623 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPAYSPTSPSYSPTSPSYS 1676
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSP SP+YSP
Sbjct: 1677 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSP 1719
[105][TOP]
>UniRef100_C7GKZ2 Rpo21p n=2 Tax=Saccharomyces cerevisiae RepID=C7GKZ2_YEAS2
Length = 1733
Score = 145 bits (366), Expect = 1e-33
Identities = 80/134 (59%), Positives = 92/134 (68%), Gaps = 6/134 (4%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS---- 196
G D+G SP Y E SP + +S + SPT+ +SP A+SPTS
Sbjct: 1513 GADYG--EATSPFGA--YGEAPTSPGFGVS-SPGFSPTSPT-YSPT--SPAYSPTSPSYS 1564
Query: 197 --SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1565 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1624
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1625 SYSPTSPSYSPTSP 1638
Score = 145 bits (365), Expect = 2e-33
Identities = 79/126 (62%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
Frame = +2
Query: 38 FGMT-PGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
FG++ PG SP S T SP+Y SPT+ + +SP ++SPTS P YSP
Sbjct: 1535 FGVSSPGFSPTSPT---YSPTSPAY--------SPTSPS-YSPT--SPSYSPTS-PSYSP 1579
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPS
Sbjct: 1580 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1639
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1640 YSPTSP 1645
Score = 144 bits (364), Expect = 2e-33
Identities = 75/106 (70%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1574 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1627
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSPAYSPTSPSYSPTSP
Sbjct: 1628 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSP 1673
Score = 144 bits (363), Expect = 3e-33
Identities = 85/149 (57%), Positives = 96/149 (64%), Gaps = 20/149 (13%)
Frame = +2
Query: 26 DGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQ---FSPYVG---GMAFS 187
DG D G+TP S SG + + M SP L S +NDA F+ Y G G A S
Sbjct: 1464 DGQDGGVTP-YSNESGLVNADLDVKDELMFSP-LVDSGSNDAMAGGFTAYGGADYGEATS 1521
Query: 188 P--------------TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTS 325
P SSPG+SP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTS
Sbjct: 1522 PFGAYGEAPTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTS 1581
Query: 326 PTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1582 PSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1610
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1581 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1634
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1635 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1680
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1595 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1648
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1649 PTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1694
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1602 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1655
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1656 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1701
Score = 142 bits (358), Expect = 1e-32
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1609 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPAYS 1662
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSPSYSPTSP
Sbjct: 1663 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP 1708
Score = 139 bits (350), Expect = 1e-31
Identities = 72/106 (67%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1616 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPAYSPTSPSYS 1669
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP YSP SP
Sbjct: 1670 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSP 1715
Score = 132 bits (333), Expect = 9e-30
Identities = 69/103 (66%), Positives = 79/103 (76%), Gaps = 1/103 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1623 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPAYSPTSPSYSPTSPSYS 1676
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSP SP+YSP
Sbjct: 1677 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSP 1719
[106][TOP]
>UniRef100_P04050 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Saccharomyces
cerevisiae RepID=RPB1_YEAST
Length = 1733
Score = 145 bits (366), Expect = 1e-33
Identities = 80/134 (59%), Positives = 92/134 (68%), Gaps = 6/134 (4%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS---- 196
G D+G SP Y E SP + +S + SPT+ +SP A+SPTS
Sbjct: 1513 GADYG--EATSPFGA--YGEAPTSPGFGVS-SPGFSPTSPT-YSPT--SPAYSPTSPSYS 1564
Query: 197 --SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1565 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1624
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1625 SYSPTSPSYSPTSP 1638
Score = 145 bits (365), Expect = 2e-33
Identities = 79/126 (62%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
Frame = +2
Query: 38 FGMT-PGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
FG++ PG SP S T SP+Y SPT+ + +SP ++SPTS P YSP
Sbjct: 1535 FGVSSPGFSPTSPT---YSPTSPAY--------SPTSPS-YSPT--SPSYSPTS-PSYSP 1579
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPS
Sbjct: 1580 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1639
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1640 YSPTSP 1645
Score = 144 bits (364), Expect = 2e-33
Identities = 75/106 (70%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1574 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1627
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSPAYSPTSPSYSPTSP
Sbjct: 1628 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSP 1673
Score = 144 bits (363), Expect = 3e-33
Identities = 85/149 (57%), Positives = 96/149 (64%), Gaps = 20/149 (13%)
Frame = +2
Query: 26 DGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQ---FSPYVG---GMAFS 187
DG D G+TP S SG + + M SP L S +NDA F+ Y G G A S
Sbjct: 1464 DGQDGGVTP-YSNESGLVNADLDVKDELMFSP-LVDSGSNDAMAGGFTAYGGADYGEATS 1521
Query: 188 P--------------TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTS 325
P SSPG+SP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTS
Sbjct: 1522 PFGAYGEAPTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTS 1581
Query: 326 PTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1582 PSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1610
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1581 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1634
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1635 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1680
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1595 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1648
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1649 PTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1694
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1602 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1655
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1656 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1701
Score = 142 bits (358), Expect = 1e-32
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1609 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPAYS 1662
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSPSYSPTSP
Sbjct: 1663 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP 1708
Score = 139 bits (350), Expect = 1e-31
Identities = 72/106 (67%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1616 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPAYSPTSPSYS 1669
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP YSP SP
Sbjct: 1670 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSP 1715
Score = 132 bits (333), Expect = 9e-30
Identities = 69/103 (66%), Positives = 79/103 (76%), Gaps = 1/103 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1623 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPAYSPTSPSYSPTSPSYS 1676
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSP SP+YSP
Sbjct: 1677 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSP 1719
[107][TOP]
>UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1
Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO
Length = 1752
Score = 145 bits (366), Expect = 1e-33
Identities = 78/137 (56%), Positives = 89/137 (64%), Gaps = 1/137 (0%)
Frame = +2
Query: 5 LQLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMA 181
+Q P Y M+PG G+ SPSY SP SP + P +
Sbjct: 1534 VQSPGYTSPFSSAMSPGY----------GLTSPSYSPSSPGYSTSPA----YMP--SSPS 1577
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
+SPTS P YSP+SP YSP+SP YSPTSP YS TSP YSPTSP YSPTSP+YSP+SP YSP
Sbjct: 1578 YSPTS-PSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSPSYSPTSPSYSP 1636
Query: 362 TSPAYSPTSPSYSPTSP 412
TSP+YSPTSPSYSPTSP
Sbjct: 1637 TSPSYSPTSPSYSPTSP 1653
Score = 144 bits (362), Expect = 4e-33
Identities = 77/134 (57%), Positives = 90/134 (67%), Gaps = 1/134 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+YM +P S T SPSY SP+ + + + SP ++SP
Sbjct: 1569 PAYMPSSP-SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSATSPSYSPTSP-----SYSP 1622
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1623 TS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1681
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1682 SYSPTSPSYSPTSP 1695
Score = 144 bits (362), Expect = 4e-33
Identities = 78/123 (63%), Positives = 91/123 (73%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S + SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1596 SPSYSPTSPS---YSATSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1646
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1647 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1706
Query: 404 TSP 412
TSP
Sbjct: 1707 TSP 1709
Score = 144 bits (362), Expect = 4e-33
Identities = 77/123 (62%), Positives = 89/123 (72%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P S T SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1600 SPTSPSYSATSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1653
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1654 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1713
Query: 404 TSP 412
TSP
Sbjct: 1714 TSP 1716
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1624 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1677
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1678 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1723
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1631 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1684
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1685 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1730
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1638 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1691
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1692 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1737
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1645 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1698
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1699 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1744
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1652 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1705
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1706 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1751
Score = 130 bits (327), Expect = 5e-29
Identities = 68/100 (68%), Positives = 79/100 (79%), Gaps = 1/100 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1659 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1712
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPS
Sbjct: 1713 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1752
Score = 121 bits (303), Expect = 3e-26
Identities = 65/98 (66%), Positives = 70/98 (71%), Gaps = 13/98 (13%)
Frame = +2
Query: 158 SPYVGGMA------FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSP 319
SPY G + FS SPGY +SP YSPSSPGYS TSP Y P+SP YSPTSP YSP
Sbjct: 1529 SPYKGVQSPGYTSPFSSAMSPGYGLTSPSYSPSSPGYS-TSPAYMPSSPSYSPTSPSYSP 1587
Query: 320 TSPTYSPSSPGYSPTSP---A----YSPTSPSYSPTSP 412
TSP+YSP+SP YSPTSP A YSPTSPSYSPTSP
Sbjct: 1588 TSPSYSPTSPSYSPTSPSYSATSPSYSPTSPSYSPTSP 1625
[108][TOP]
>UniRef100_B3RM26 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
RepID=B3RM26_TRIAD
Length = 1784
Score = 145 bits (365), Expect = 2e-33
Identities = 82/159 (51%), Positives = 92/159 (57%), Gaps = 28/159 (17%)
Frame = +2
Query: 20 YMDGLDFGMTPGRSPISGTPYHEGMMSP---SYMLSPNLRLSPTNDAQFSPYVGG----- 175
Y G+ GMTPG + S + E SP S SP SP + SPY+
Sbjct: 1510 YTPGMGGGMTPGAAGFSPSGASEPSFSPASYSPNWSPGPAASPGSPGPSSPYMQSPTDIT 1569
Query: 176 --------------------MAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYS 295
+SPT SP YSP+SP YSP+SP YSPTSP YSPTSP YS
Sbjct: 1570 FYVAFQSIILTVESKLLTDFSKYSPT-SPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYS 1628
Query: 296 PTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP+YSP+SP YSPTSP YSPTSPSYSPTSP
Sbjct: 1629 PTSPRYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSP 1667
Score = 142 bits (359), Expect = 9e-33
Identities = 75/106 (70%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP R SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1624 SPSYSPTSP--RYSPTSPS-YSPT--SPSYSPTS-PRYSPTSPSYSPTSPSYSPTSPKYS 1677
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1678 PTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1723
Score = 142 bits (358), Expect = 1e-32
Identities = 81/128 (63%), Positives = 89/128 (69%), Gaps = 2/128 (1%)
Frame = +2
Query: 35 DFGMTPGRSP-ISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
DF SP S T SPSY SP R SPT+ + +SP +SPTS P Y
Sbjct: 1588 DFSKYSPTSPSYSPTSPRYSPTSPSYSPTSP--RYSPTSPS-YSPT--SPRYSPTS-PSY 1641
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
SP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP+YSPTS
Sbjct: 1642 SPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPKYSPTSPRYSPTSPSYSPTSPSYSPTS 1701
Query: 389 PSYSPTSP 412
PSYSPTSP
Sbjct: 1702 PSYSPTSP 1709
Score = 142 bits (358), Expect = 1e-32
Identities = 76/112 (67%), Positives = 84/112 (75%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SPSY SP R SPT+ + +SP ++SPTS SP YSP+SP YSP+SP YSP
Sbjct: 1645 SPSYSPTSP--RYSPTSPS-YSPT--SPSYSPTSPKYSPTSPRYSPTSPSYSPTSPSYSP 1699
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSPSYSPTSP
Sbjct: 1700 TSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSP 1751
Score = 141 bits (356), Expect = 2e-32
Identities = 74/106 (69%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + SPT+ ++SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1666 SPSYSPTSP--KYSPTSP-RYSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1719
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSPSYSPTSP
Sbjct: 1720 PTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSP 1765
Score = 141 bits (355), Expect = 3e-32
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ ++SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1638 SPSYSPTSPSY--SPTSP-RYSPT--SPSYSPTS-PSYSPTSPKYSPTSPRYSPTSPSYS 1691
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSPSYSPTSP
Sbjct: 1692 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPRYSPTSPSYSPTSP 1737
Score = 141 bits (355), Expect = 3e-32
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP R SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1673 SPKYSPTSP--RYSPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPRYS 1726
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1727 PTSPSYSPTSPRYSPTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSP 1772
Score = 133 bits (335), Expect = 5e-30
Identities = 70/103 (67%), Positives = 81/103 (78%), Gaps = 1/103 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1687 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPRYSPTSPSYSPTSPRYS 1740
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP YSP
Sbjct: 1741 PTSPSYSPTSPRYSPTSPSYSPTSPSYSPTSPSYSPTSPDYSP 1783
Score = 95.9 bits (237), Expect = 1e-18
Identities = 53/83 (63%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ ++SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1708 SPSYSPTSPSY--SPTSP-RYSPT--SPSYSPTS-PRYSPTSPSYSPTSPRYSPTSPSYS 1761
Query: 275 PTSPGYSPTSPGYSPTSPTYSPS 343
PTSP YSPTSP YSPTSP YSP+
Sbjct: 1762 PTSPSYSPTSPSYSPTSPDYSPN 1784
[109][TOP]
>UniRef100_B3LH31 DNA-directed RNA polymerase n=1 Tax=Saccharomyces cerevisiae RM11-1a
RepID=B3LH31_YEAS1
Length = 1733
Score = 145 bits (365), Expect = 2e-33
Identities = 79/126 (62%), Positives = 92/126 (73%), Gaps = 1/126 (0%)
Frame = +2
Query: 38 FGMT-PGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
FG++ PG SP S T SP+Y SPT+ + +SP ++SPTS P YSP
Sbjct: 1535 FGVSSPGFSPTSPT---YSPTSPAY--------SPTSPS-YSPT--SPSYSPTS-PSYSP 1579
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPS
Sbjct: 1580 TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1639
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1640 YSPTSP 1645
Score = 144 bits (364), Expect = 2e-33
Identities = 80/134 (59%), Positives = 92/134 (68%), Gaps = 6/134 (4%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS---- 196
G D+G SP Y E SP + +S + SPT+ +SP A+SPTS
Sbjct: 1513 GADYG--EATSPFGA--YGEPPTSPGFGVS-SPGFSPTSPT-YSPT--SPAYSPTSPSYS 1564
Query: 197 --SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1565 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1624
Query: 371 AYSPTSPSYSPTSP 412
+YSPTSPSYSPTSP
Sbjct: 1625 SYSPTSPSYSPTSP 1638
Score = 144 bits (364), Expect = 2e-33
Identities = 75/106 (70%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1574 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1627
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSPAYSPTSPSYSPTSP
Sbjct: 1628 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSP 1673
Score = 144 bits (363), Expect = 3e-33
Identities = 85/149 (57%), Positives = 96/149 (64%), Gaps = 20/149 (13%)
Frame = +2
Query: 26 DGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQ---FSPYVG---GMAFS 187
DG D G+TP S SG + + M SP L S +NDA F+ Y G G A S
Sbjct: 1464 DGQDGGVTP-YSNESGLVNADLDVKDELMFSP-LVDSGSNDAMAGGFTAYGGADYGEATS 1521
Query: 188 P--------------TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTS 325
P SSPG+SP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTS
Sbjct: 1522 PFGAYGEPPTSPGFGVSSPGFSPTSPTYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTS 1581
Query: 326 PTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1582 PSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1610
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1581 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1634
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1635 PTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSP 1680
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1595 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1648
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1649 PTSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1694
Score = 142 bits (358), Expect = 1e-32
Identities = 73/106 (68%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1602 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1655
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP+YSPTSP
Sbjct: 1656 PTSPAYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSP 1701
Score = 142 bits (358), Expect = 1e-32
Identities = 74/106 (69%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1609 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPAYS 1662
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSPSYSPTSP
Sbjct: 1663 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSP 1708
Score = 139 bits (350), Expect = 1e-31
Identities = 72/106 (67%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1616 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPAYSPTSPSYS 1669
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP YSP SP
Sbjct: 1670 PTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSP 1715
Score = 132 bits (333), Expect = 9e-30
Identities = 69/103 (66%), Positives = 79/103 (76%), Gaps = 1/103 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1623 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPAYSPTSPSYSPTSPSYS 1676
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSP SP+YSP
Sbjct: 1677 PTSPSYSPTSPSYSPTSPNYSPTSPSYSPTSPGYSPGSPAYSP 1719
[110][TOP]
>UniRef100_Q8SSC4 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Encephalitozoon
cuniculi RepID=RPB1_ENCCU
Length = 1599
Score = 145 bits (365), Expect = 2e-33
Identities = 78/129 (60%), Positives = 95/129 (73%), Gaps = 11/129 (8%)
Frame = +2
Query: 59 SPISGTPYHE------GMMSPSYM---LSPNL--RLSPTNDAQFSPYVGGMAFSPTSSPG 205
+P+ TP + G SP+++ S +L RLSPT+ + +SP ++SPTS P
Sbjct: 1431 TPVISTPSSDSFSISSGNWSPTHLEMAYSRDLGERLSPTSPS-YSPT--SPSYSPTS-PS 1486
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPT
Sbjct: 1487 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT 1546
Query: 386 SPSYSPTSP 412
SPSYSPTSP
Sbjct: 1547 SPSYSPTSP 1555
Score = 143 bits (361), Expect = 5e-33
Identities = 74/106 (69%), Positives = 85/106 (80%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1470 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1523
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1524 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1569
Score = 135 bits (339), Expect = 2e-30
Identities = 65/117 (55%), Positives = 79/117 (67%)
Frame = +2
Query: 62 PISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSS 241
P+S + + + +P+ + +SP MA+S SP+SP YSP+S
Sbjct: 1418 PLSNPVFKPNEPATPVISTPSSDSFSISSGNWSPTHLEMAYSRDLGERLSPTSPSYSPTS 1477
Query: 242 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1478 PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1534
Score = 134 bits (338), Expect = 2e-30
Identities = 70/102 (68%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1477 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYS 1530
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 400
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYS
Sbjct: 1531 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1572
Score = 124 bits (311), Expect = 3e-27
Identities = 70/129 (54%), Positives = 86/129 (66%), Gaps = 1/129 (0%)
Frame = +2
Query: 17 SYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPT 193
+Y L ++P S T SPSY SP+ SPT+ + +SP ++SPT
Sbjct: 1457 AYSRDLGERLSPTSPSYSPTSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPT 1511
Query: 194 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
S P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+
Sbjct: 1512 S-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS 1570
Query: 374 YSPTSPSYS 400
YS + S+S
Sbjct: 1571 YSVSMSSFS 1579
[111][TOP]
>UniRef100_P16356 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Caenorhabditis
elegans RepID=RPB1_CAEEL
Length = 1852
Score = 145 bits (365), Expect = 2e-33
Identities = 81/135 (60%), Positives = 94/135 (69%), Gaps = 2/135 (1%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSP-ISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFS 187
PSY G+ G+ SP S T H SPSY SP SP + + +SP ++S
Sbjct: 1565 PSY-GGMSPGVYSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPS-YSPT--SPSYS 1620
Query: 188 PTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTS 367
PTS P YSP+SP YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP+YSPSSP YSPTS
Sbjct: 1621 PTS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPSYSPSSPSYSPSSPRYSPTS 1679
Query: 368 PAYSPTSPSYSPTSP 412
P YSPTSP+YSPTSP
Sbjct: 1680 PTYSPTSPTYSPTSP 1694
Score = 134 bits (337), Expect = 3e-30
Identities = 77/127 (60%), Positives = 91/127 (71%), Gaps = 7/127 (5%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGY 229
G+SP+S + SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP Y
Sbjct: 1604 GQSPVSPS---YSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSY 1654
Query: 230 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS----- 394
SPSSP YSP+SP YSP+SP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSPS
Sbjct: 1655 SPSSPSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGG 1714
Query: 395 -YSPTSP 412
YSP+SP
Sbjct: 1715 GYSPSSP 1721
Score = 127 bits (320), Expect = 3e-28
Identities = 68/112 (60%), Positives = 76/112 (67%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP + + SP + S S GYSPSSP YSPSSP YSPTSP YS
Sbjct: 1679 SPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSPSSPKYSPSSPTYSPTSPSYS 1738
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPT------SPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+SPTY+PSSP Y+PT SP YSPTSP+YSPTSP
Sbjct: 1739 PTSPQYSPTSPQYSPSSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSP 1790
Score = 124 bits (312), Expect = 2e-27
Identities = 81/144 (56%), Positives = 90/144 (62%), Gaps = 20/144 (13%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------S 199
G +P S T SPSY SP+ SPT+ + +SP ++SPTS S
Sbjct: 1604 GQSPVSPSYSPTSPSYSPTSPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTSPSYSPSS 1658
Query: 200 PGYSPSSPGYSPSSPGYSPTSP-------GYSPTSPGYSPTSPGYSPTSPT------YSP 340
P YSPSSP YSPSSP YSPTSP YSPTSP YSPTSP YSPTSP+ YSP
Sbjct: 1659 PSYSPSSPSYSPSSPRYSPTSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYESGGGYSP 1718
Query: 341 SSPGYSPTSPAYSPTSPSYSPTSP 412
SSP YSP+SP YSPTSPSYSPTSP
Sbjct: 1719 SSPKYSPSSPTYSPTSPSYSPTSP 1742
Score = 123 bits (308), Expect = 7e-27
Identities = 73/133 (54%), Positives = 85/133 (63%), Gaps = 9/133 (6%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYMLSP----NLRLSPTNDAQFSPYVGGMAFSPTS--SP 202
G+TP + + +P GM SP SP + SP N+ +SP G S +P
Sbjct: 1507 GVTPTYAGAAWSPTTGGM-SPGAGFSPAGNTDGGASPFNEGGWSPASPGDPLGALSPRTP 1565
Query: 203 GYSPSSPG-YSPSSPGYSPTSPGYSPTSPGYSPTSP--GYSPTSPTYSPSSPGYSPTSPA 373
Y SPG YSPSSP +S TSP YSPTSP YSPTSP G SP SP+YSP+SP YSPTSP+
Sbjct: 1566 SYGGMSPGVYSPSSPQFSMTSPHYSPTSPSYSPTSPAAGQSPVSPSYSPTSPSYSPTSPS 1625
Query: 374 YSPTSPSYSPTSP 412
YSPTSPSYSPTSP
Sbjct: 1626 YSPTSPSYSPTSP 1638
Score = 118 bits (296), Expect = 2e-25
Identities = 78/154 (50%), Positives = 90/154 (58%), Gaps = 21/154 (13%)
Frame = +2
Query: 14 PSYMDGLDFG-MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY G + +P SP S T SPSY SPT+ Q+SP +SP
Sbjct: 1708 PSYESGGGYSPSSPKYSPSSPT---YSPTSPSY--------SPTSP-QYSPT--SPQYSP 1753
Query: 191 TSSPGYSPSSPGYSP------SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPS--- 343
SSP Y+PSSP Y+P SSP YSPTSP YSPTSP Y+P+SP YSPTSPTY+PS
Sbjct: 1754 -SSPTYTPSSPTYNPTSPRGFSSPQYSPTSPTYSPTSPSYTPSSPQYSPTSPTYTPSPSE 1812
Query: 344 -----------SPGYSPTSPAYSPTSPSYSPTSP 412
SP YSP+SP YSP SPSYSP+SP
Sbjct: 1813 QPGTSAQYSPTSPTYSPSSPTYSPASPSYSPSSP 1846
Score = 99.8 bits (247), Expect = 9e-20
Identities = 58/105 (55%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SP Q+SP SPT SP +SP Y+PSSP YSPTSP Y+
Sbjct: 1762 SPTYNPTSPRGFSSP----QYSPT------SPTYSP----TSPSYTPSSPQYSPTSPTYT 1807
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
P+ TS YSPTSPTYSPSSP YSP SP+YSP+SP+Y P S
Sbjct: 1808 PSPSEQPGTSAQYSPTSPTYSPSSPTYSPASPSYSPSSPTYDPNS 1852
Score = 91.3 bits (225), Expect = 3e-17
Identities = 54/104 (51%), Positives = 63/104 (60%), Gaps = 14/104 (13%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY-- 271
SP+Y S + +PT+ FS +SPTS P YSP+SP Y+PSSP YSPTSP Y
Sbjct: 1755 SPTYTPS-SPTYNPTSPRGFS----SPQYSPTS-PTYSPTSPSYTPSSPQYSPTSPTYTP 1808
Query: 272 ------------SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTS 367
SPTSP YSP+SP YSP SP+YSPSSP Y P S
Sbjct: 1809 SPSEQPGTSAQYSPTSPTYSPSSPTYSPASPSYSPSSPTYDPNS 1852
Score = 73.6 bits (179), Expect = 7e-12
Identities = 54/143 (37%), Positives = 61/143 (42%), Gaps = 62/143 (43%)
Frame = +2
Query: 170 GGMAFSPTSSPGYSPSSPGYSPSSPGYSPT------SP---------------------- 265
GG S SP SP +SP + G +PT SP
Sbjct: 1482 GGFYGSFAGSPSNREFSPAHSPWNSGVTPTYAGAAWSPTTGGMSPGAGFSPAGNTDGGAS 1541
Query: 266 -----GYSPTSPG--------------------YSPTSPGYSPTSPTYSPSSPGYSPTSP 370
G+SP SPG YSP+SP +S TSP YSP+SP YSPTSP
Sbjct: 1542 PFNEGGWSPASPGDPLGALSPRTPSYGGMSPGVYSPSSPQFSMTSPHYSPTSPSYSPTSP 1601
Query: 371 A---------YSPTSPSYSPTSP 412
A YSPTSPSYSPTSP
Sbjct: 1602 AAGQSPVSPSYSPTSPSYSPTSP 1624
[112][TOP]
>UniRef100_C5LSN8 P35 antigen, putative (Fragment) n=1 Tax=Perkinsus marinus ATCC
50983 RepID=C5LSN8_9ALVE
Length = 170
Score = 144 bits (364), Expect = 2e-33
Identities = 76/106 (71%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 12 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 65
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSPSYSPTSP
Sbjct: 66 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPSYSPTSP 111
Score = 144 bits (362), Expect = 4e-33
Identities = 75/106 (70%), Positives = 84/106 (79%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 33 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 86
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 87 PTSPAYSPTSPAYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSP 132
Score = 143 bits (361), Expect = 5e-33
Identities = 75/106 (70%), Positives = 83/106 (78%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 40 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 93
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 94 PTSPAYSPTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 139
Score = 141 bits (355), Expect = 3e-32
Identities = 64/78 (82%), Positives = 69/78 (88%)
Frame = +2
Query: 179 AFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 358
A+SPTS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YS
Sbjct: 7 AYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYS 65
Query: 359 PTSPAYSPTSPSYSPTSP 412
PTSPAYSPTSP+YSPTSP
Sbjct: 66 PTSPAYSPTSPAYSPTSP 83
Score = 139 bits (351), Expect = 7e-32
Identities = 63/77 (81%), Positives = 68/77 (88%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
+SPTS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSP
Sbjct: 1 YSPTS-PAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSP 59
Query: 362 TSPAYSPTSPSYSPTSP 412
TSPAYSPTSP+YSPTSP
Sbjct: 60 TSPAYSPTSPAYSPTSP 76
Score = 133 bits (334), Expect = 7e-30
Identities = 70/101 (69%), Positives = 78/101 (77%), Gaps = 1/101 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 47 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPAYS 100
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
PTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSP+Y
Sbjct: 101 PTSPSYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAY 141
Score = 129 bits (325), Expect = 8e-29
Identities = 74/122 (60%), Positives = 82/122 (67%), Gaps = 17/122 (13%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 54 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPTSPAYSPTSPSYS 107
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY----------------SPTSPSYSPT 406
PTSP YSPTSP YSPTSP YSP+SP YSPTSPAY SPTSP+YS T
Sbjct: 108 PTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYYHPLVTSSDEGPVVRYSPTSPAYSNT 167
Query: 407 SP 412
SP
Sbjct: 168 SP 169
Score = 102 bits (253), Expect = 2e-20
Identities = 62/102 (60%), Positives = 68/102 (66%), Gaps = 3/102 (2%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SPT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 75 SPAYSPTSP--AYSPTSPA-YSPT--SPAYSPTS-PSYSPTSPAYSPTSPAYSPTSPAYS 128
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP--GYSPTSPAYSPTSPS 394
PTSP YSPTSP Y T S P YSPTSPAYS TSPS
Sbjct: 129 PTSPAYSPTSPAYYHPLVTSSDEGPVVRYSPTSPAYSNTSPS 170
[113][TOP]
>UniRef100_O96452 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae
RepID=O96452_ANTLO
Length = 1553
Score = 144 bits (364), Expect = 2e-33
Identities = 73/119 (61%), Positives = 86/119 (72%)
Frame = +2
Query: 56 RSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSP 235
RSP+S Y + P ++ + + T + +SP A+SPTS P YSP+SP YSP
Sbjct: 1407 RSPVSDVRYGSSSV-PFSPIAAHGYAAGTTPSVYSPT--SPAYSPTS-PAYSPTSPAYSP 1462
Query: 236 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 1463 TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1521
Score = 144 bits (364), Expect = 2e-33
Identities = 76/118 (64%), Positives = 84/118 (71%)
Frame = +2
Query: 59 SPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPS 238
SPI+ Y G Y SPT+ A +SP A+SPTS P YSP+SP YSP+
Sbjct: 1423 SPIAAHGYAAGTTPSVY--------SPTSPA-YSPT--SPAYSPTS-PAYSPTSPAYSPT 1470
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 1471 SPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1528
Score = 98.6 bits (244), Expect = 2e-19
Identities = 57/109 (52%), Positives = 65/109 (59%), Gaps = 7/109 (6%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYMLSPNL-RLSPTNDAQFSPYVGGMAFSPTS------S 199
G G +P +P S SP SPT+ A +SP A+SPTS S
Sbjct: 1429 GYAAGTTPSVYSPTSPAYSPTSPAYSPTSPAYSPTSPA-YSPT--SPAYSPTSPAYSPTS 1485
Query: 200 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSS 346
P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP Y PS+
Sbjct: 1486 PAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPVYRPST 1534
[114][TOP]
>UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CBQ3_YARLI
Length = 1750
Score = 144 bits (363), Expect = 3e-33
Identities = 74/106 (69%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + L + + FSP AF+ TS P YSPSSP YSP+SP YSPTSP YS
Sbjct: 1558 SPSYSPSSPGMGLGAASPS-FSP--SSPAFAATS-PSYSPSSPSYSPTSPSYSPTSPSYS 1613
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1614 PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1659
Score = 138 bits (348), Expect = 2e-31
Identities = 71/113 (62%), Positives = 81/113 (71%), Gaps = 5/113 (4%)
Frame = +2
Query: 89 GMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPG 268
G SPS+ SP+ +SP ++SPTS P YSP+SP YSP+SP YSPTSP
Sbjct: 1571 GAASPSF--SPSSPAFAATSPSYSP--SSPSYSPTS-PSYSPTSPSYSPTSPSYSPTSPS 1625
Query: 269 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP-----AYSPTSPSYSPTSP 412
YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP +YSPTSPSYSPTSP
Sbjct: 1626 YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSYSPTSPSYSPTSP 1678
Score = 131 bits (329), Expect = 3e-29
Identities = 75/119 (63%), Positives = 85/119 (71%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTS---- 262
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+SP YSPTS
Sbjct: 1616 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSPSYSPTSYSPT 1669
Query: 263 -PGYSPTSPGYSPTSPGYSPTSPTYSPSSP--------GYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP YSPTSP+YSPSSP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1670 SPSYSPTSPSYSPTSPSYSPTSPSYSPSSPKFNAGASTSYSPTSPSYSPTSPSYSPTSP 1728
Score = 128 bits (322), Expect = 2e-28
Identities = 73/119 (61%), Positives = 85/119 (71%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSS-----PGYSPT 259
SPSY SP+ SPT+ + +SP ++SPTS P YSP+SP YSP+S P YSPT
Sbjct: 1623 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSPSYSPTSYSPTSPSYSPT 1676
Query: 260 SPGYSPTSPGYSPTSPGYSPTSP--------TYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP YSP+SP +YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1677 SPSYSPTSPSYSPTSPSYSPSSPKFNAGASTSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1735
Score = 125 bits (315), Expect = 1e-27
Identities = 70/113 (61%), Positives = 82/113 (72%), Gaps = 9/113 (7%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP ++SPTS YSP+SP YSP+SP YSPTSP YS
Sbjct: 1637 SPSYSPTSPSY--SPTSPS-YSPT--SPSYSPTS---YSPTSPSYSPTSPSYSPTSPSYS 1688
Query: 275 PTSPGYSPTSP--------GYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
PTSP YSP+SP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP S
Sbjct: 1689 PTSPSYSPSSPKFNAGASTSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPGS 1741
Score = 125 bits (314), Expect = 1e-27
Identities = 75/145 (51%), Positives = 88/145 (60%), Gaps = 12/145 (8%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
PSY GM G + S +P + S SP+ +SP ++SPT
Sbjct: 1559 PSYSPSSP-GMGLGAASPSFSPSSPAFAATSPSYSPSSPSYSPTSPSYSPT--SPSYSPT 1615
Query: 194 SSPGYSPSSP-------GYSPSSPGYSPTSPGYSPTSPGYSPTSP-----GYSPTSPTYS 337
S P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YS
Sbjct: 1616 S-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSYSPTSPSYS 1674
Query: 338 PSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSPTSP+YSPTSPSYSP+SP
Sbjct: 1675 PTSPSYSPTSPSYSPTSPSYSPSSP 1699
Score = 119 bits (298), Expect = 1e-25
Identities = 75/180 (41%), Positives = 82/180 (45%), Gaps = 70/180 (38%)
Frame = +2
Query: 83 HEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP------------------------ 190
H M S +P SP DA + G + FSP
Sbjct: 1473 HGEMGSADGAATPYDSSSPAYDALQARGGGDVIFSPIGTSGAPEMSGGFSEYGGFGHGGD 1532
Query: 191 -----------------------TSSPGYSPSSPG-----------------------YS 232
+SP YSPSSPG YS
Sbjct: 1533 GSGSAYTPTSPFSSFGAASPGFAATSPSYSPSSPGMGLGAASPSFSPSSPAFAATSPSYS 1592
Query: 233 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PSSP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1593 PSSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1652
[115][TOP]
>UniRef100_Q5ACI7 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=Q5ACI7_CANAL
Length = 1728
Score = 144 bits (363), Expect = 3e-33
Identities = 79/139 (56%), Positives = 92/139 (66%), Gaps = 21/139 (15%)
Frame = +2
Query: 59 SPISGTPYHEG---MMSPSYMLSPNLRLSPTNDAQFSPYVGGMA-----FSPTS------ 196
SP + +P+ G + SP Y SP SPT+ + +SP A +SPTS
Sbjct: 1517 SPAATSPFSYGYNSITSPGYT-SPGYGYSPTSPS-YSPTSPSYAPTSPAYSPTSPSYAPT 1574
Query: 197 -------SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY 355
SP Y+P+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP Y
Sbjct: 1575 SPAYSPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSY 1634
Query: 356 SPTSPAYSPTSPSYSPTSP 412
SPTSPAYSPTSPSYSPTSP
Sbjct: 1635 SPTSPAYSPTSPSYSPTSP 1653
Score = 143 bits (360), Expect = 7e-33
Identities = 76/126 (60%), Positives = 91/126 (72%), Gaps = 1/126 (0%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
+G +P S T SP+Y SP+ +PT+ A +SP +++PTS P YSP
Sbjct: 1541 YGYSPTSPSYSPTSPSYAPTSPAYSPTSPSY--APTSPA-YSPT--SPSYAPTS-PAYSP 1594
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPS
Sbjct: 1595 TSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYSPTSPSYSPTSPS 1654
Query: 395 YSPTSP 412
YSPTSP
Sbjct: 1655 YSPTSP 1660
Score = 142 bits (357), Expect = 2e-32
Identities = 73/105 (69%), Positives = 81/105 (77%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY +PT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YSP
Sbjct: 1582 SPSY--------APTSPA-YSPT--SPAYSPTS-PSYSPTSPQYSPTSPSYSPTSPSYSP 1629
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSPSYSPTSP
Sbjct: 1630 TSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSP 1674
Score = 140 bits (354), Expect = 3e-32
Identities = 72/105 (68%), Positives = 81/105 (77%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SPT+ Q+SP ++SPTS P YSP+SP YSP+SP YSPTSP YSP
Sbjct: 1603 SPSY--------SPTSP-QYSPT--SPSYSPTS-PSYSPTSPSYSPTSPAYSPTSPSYSP 1650
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP YSPTSP
Sbjct: 1651 TSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSP 1695
Score = 136 bits (343), Expect = 6e-31
Identities = 73/106 (68%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1617 SPSYSPTSPSY--SPTSPS-YSPT--SPAYSPTS-PSYSPTSPSYSPTSPQYSPTSPSYS 1670
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSP SP
Sbjct: 1671 PTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPGSP 1716
Score = 130 bits (326), Expect = 6e-29
Identities = 70/106 (66%), Positives = 78/106 (73%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ A +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1624 SPSYSPTSPSY--SPTSPA-YSPT--SPSYSPTS-PSYSPTSPQYSPTSPSYSPTSPQYS 1677
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSP SP Y P P
Sbjct: 1678 PTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPGSPGYEPEPP 1723
[116][TOP]
>UniRef100_C4YN85 DNA-directed RNA polymerase n=1 Tax=Candida albicans
RepID=C4YN85_CANAL
Length = 1742
Score = 143 bits (360), Expect = 7e-33
Identities = 78/131 (59%), Positives = 91/131 (69%), Gaps = 6/131 (4%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMA-----FSPTSS 199
+G +P S T SP+Y SP+ +PT+ A +SP A +SPTS
Sbjct: 1541 YGYSPTSPSYSPTSPSYAPTSPAYSPTSPSY--APTSPA-YSPTSPSYAPTSPAYSPTS- 1596
Query: 200 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
P Y+P+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSPAYS
Sbjct: 1597 PSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSPSYSPTSPAYS 1656
Query: 380 PTSPSYSPTSP 412
PTSPSYSPTSP
Sbjct: 1657 PTSPSYSPTSP 1667
Score = 142 bits (359), Expect = 9e-33
Identities = 70/114 (61%), Positives = 80/114 (70%), Gaps = 6/114 (5%)
Frame = +2
Query: 89 GMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGY 250
G SP Y SP ++P A+SPTS SP YSP+SP Y+P+SP Y
Sbjct: 1535 GYTSPGYGYSPTSPSYSPTSPSYAP--TSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAY 1592
Query: 251 SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSP Y+PTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1593 SPTSPSYAPTSPAYSPTSPAYSPTSPSYSPTSPQYSPTSPSYSPTSPSYSPTSP 1646
Score = 142 bits (357), Expect = 2e-32
Identities = 73/105 (69%), Positives = 81/105 (77%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY +PT+ A +SP A+SPTS P YSP+SP YSP+SP YSPTSP YSP
Sbjct: 1596 SPSY--------APTSPA-YSPT--SPAYSPTS-PSYSPTSPQYSPTSPSYSPTSPSYSP 1643
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP+YSP+SP YSPTSP YSPTSPSYSPTSP
Sbjct: 1644 TSPSYSPTSPAYSPTSPSYSPTSPSYSPTSPQYSPTSPSYSPTSP 1688
Score = 140 bits (354), Expect = 3e-32
Identities = 72/105 (68%), Positives = 81/105 (77%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SPT+ Q+SP ++SPTS P YSP+SP YSP+SP YSPTSP YSP
Sbjct: 1617 SPSY--------SPTSP-QYSPT--SPSYSPTS-PSYSPTSPSYSPTSPAYSPTSPSYSP 1664
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSP YSPTSP
Sbjct: 1665 TSPSYSPTSPQYSPTSPSYSPTSPQYSPTSPSYSPTSPQYSPTSP 1709
Score = 139 bits (349), Expect = 1e-31
Identities = 73/137 (53%), Positives = 90/137 (65%), Gaps = 4/137 (2%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSP-SYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
P ++ ++ G G + G P SP SY + S T+ SP G SP
Sbjct: 1494 PIHIAQMNEGNIGGLTSYGGQPTSPAATSPFSYGYN-----SITSPGYTSPGYGYSPTSP 1548
Query: 191 T---SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
+ +SP Y+P+SP YSP+SP Y+PTSP YSPTSP Y+PTSP YSPTSP+Y+P+SP YSP
Sbjct: 1549 SYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSP 1608
Query: 362 TSPAYSPTSPSYSPTSP 412
TSPAYSPTSPSYSPTSP
Sbjct: 1609 TSPAYSPTSPSYSPTSP 1625
Score = 136 bits (343), Expect = 6e-31
Identities = 73/106 (68%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ + +SP A+SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1631 SPSYSPTSPSY--SPTSPS-YSPT--SPAYSPTS-PSYSPTSPSYSPTSPQYSPTSPSYS 1684
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSP SP
Sbjct: 1685 PTSPQYSPTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPGSP 1730
Score = 135 bits (340), Expect = 1e-30
Identities = 68/129 (52%), Positives = 84/129 (65%)
Frame = +2
Query: 26 DGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
+ +D G SPI +EG + PT+ A SP+ G ++ +SPG
Sbjct: 1482 ENIDIDAGAGFSPIHIAQMNEGNIGGLTSYGGQ----PTSPAATSPFSYG--YNSITSPG 1535
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
Y+ GYSP+SP YSPTSP Y+PTSP YSPTSP Y+PTSP YSP+SP Y+PTSPAYSPT
Sbjct: 1536 YTSPGYGYSPTSPSYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPTSPSYAPTSPAYSPT 1595
Query: 386 SPSYSPTSP 412
SPSY+PTSP
Sbjct: 1596 SPSYAPTSP 1604
Score = 130 bits (326), Expect = 6e-29
Identities = 70/106 (66%), Positives = 78/106 (73%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP+ SPT+ A +SP ++SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1638 SPSYSPTSPSY--SPTSPA-YSPT--SPSYSPTS-PSYSPTSPQYSPTSPSYSPTSPQYS 1691
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSP SP Y P P
Sbjct: 1692 PTSPSYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPGSPGYEPEPP 1737
[117][TOP]
>UniRef100_C5Y387 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5Y387_SORBI
Length = 1874
Score = 142 bits (359), Expect = 9e-33
Identities = 90/196 (45%), Positives = 108/196 (55%), Gaps = 60/196 (30%)
Frame = +2
Query: 5 LQLPSYMDGLDFGMT----PGRSPISGTPYHEGMMSPSYMLSPNLRLSPTND-AQFSPYV 169
LQLPSY+DGLDFG+T P SP+SG+ YHEG+MS S++LSP+ R SP + A FSPYV
Sbjct: 1476 LQLPSYVDGLDFGITSAPSPLSSPLSGSSYHEGLMSSSHLLSPDFRHSPIDTYASFSPYV 1535
Query: 170 GGMAFSPTSSPG-YSP---SSPGYSP--------------------------SSPGYSPT 259
M+ SP S G YSP S GYSP +S Y+P
Sbjct: 1536 RDMSLSPVPSQGGYSPIPRSESGYSPIPRSVRYMAVSPIYTPYNAASPVNASTSTSYTPV 1595
Query: 260 SPGYSPTSPGYSPTSPGYSPTSPT-----------------------YSPSSPGYSP--T 364
SP YSPT+P Y+P SP YSPT+P Y+PSSP +SP T
Sbjct: 1596 SPVYSPTTPVYTPMSPVYSPTTPVSSQIQSYSSASPIYNPISPNSSRYNPSSPSFSPTST 1655
Query: 365 SPAYSPTSPSYSPTSP 412
SP+YSP S SYSPTSP
Sbjct: 1656 SPSYSPASASYSPTSP 1671
Score = 137 bits (345), Expect = 4e-31
Identities = 73/122 (59%), Positives = 88/122 (72%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P SP S +P + + SP SPT+ + +SP +++SPTS P YSP+SP
Sbjct: 1647 SPSFSPTSTSPSYSPASASYSPTSPFY--SPTSPS-YSP--ASLSYSPTS-PFYSPTSPS 1700
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
YSP+S YSPTSP YSPTSP YSP+SP YSPTSPTYSP+S GYSPTSP YSPTSP+YSPT
Sbjct: 1701 YSPASLSYSPTSPFYSPTSPSYSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPTSPTYSPT 1760
Query: 407 SP 412
SP
Sbjct: 1761 SP 1762
Score = 131 bits (330), Expect = 2e-29
Identities = 80/158 (50%), Positives = 92/158 (58%), Gaps = 36/158 (22%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSP-NLRLSPTN------DAQFSPYVGGMAFSPTSSPG 205
+P + S T SPSY SP +L SPT+ +SP +++SPTS P
Sbjct: 1660 SPASASYSPTSPFYSPTSPSY--SPASLSYSPTSPFYSPTSPSYSP--ASLSYSPTS-PF 1714
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA---- 373
YSP+SP YSPSSP YSPTSP YSPTS GYSPTSPGYSPTSPTYSP+SP YSPTSP+
Sbjct: 1715 YSPTSPSYSPSSPSYSPTSPTYSPTSLGYSPTSPGYSPTSPTYSPTSPNYSPTSPSYNLS 1774
Query: 374 -------------------------YSPTSPSYSPTSP 412
YSPTSP+YSPTSP
Sbjct: 1775 YTEYNSSNTYSPTRPRITLDSQAPDYSPTSPTYSPTSP 1812
Score = 81.3 bits (199), Expect = 3e-14
Identities = 61/148 (41%), Positives = 71/148 (47%), Gaps = 44/148 (29%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSP---- 265
SPSY S + SPT+ +SP + +SPTS PGYSP+SP YSP+SP YSPTSP
Sbjct: 1719 SPSYSPS-SPSYSPTSPT-YSPT--SLGYSPTS-PGYSPTSPTYSPTSPNYSPTSPSYNL 1773
Query: 266 --------------------------------GYSPTSPGYSPTSPGYSPTSPTYSPS-- 343
YSPTSP YS S YSP PT
Sbjct: 1774 SYTEYNSSNTYSPTRPRITLDSQAPDYSPTSPTYSPTSPSYSLPSLSYSPNRPTDDSGRP 1833
Query: 344 SPGYSPTSPAY------SPTSPSYSPTS 409
SP YSPTSP + SPT+ YSP+S
Sbjct: 1834 SPDYSPTSPNFSPNRSDSPTAADYSPSS 1861
Score = 72.4 bits (176), Expect = 1e-11
Identities = 53/125 (42%), Positives = 64/125 (51%), Gaps = 23/125 (18%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT--------SSP 202
+PG SP S T SP+Y SP SP+ + ++ Y +SPT +P
Sbjct: 1747 SPGYSPTSPT---YSPTSPNY--SPT---SPSYNLSYTEYNSSNTYSPTRPRITLDSQAP 1798
Query: 203 GYSPSSPGYSPSSPGYSPTSPGYSPT---------SPGYSPTSPGYSPT---SPT---YS 337
YSP+SP YSP+SP YS S YSP SP YSPTSP +SP SPT YS
Sbjct: 1799 DYSPTSPTYSPTSPSYSLPSLSYSPNRPTDDSGRPSPDYSPTSPNFSPNRSDSPTAADYS 1858
Query: 338 PSSPG 352
PSS G
Sbjct: 1859 PSSTG 1863
[118][TOP]
>UniRef100_B0XAQ9 DNA-directed RNA polymerase n=1 Tax=Culex quinquefasciatus
RepID=B0XAQ9_CULQU
Length = 1874
Score = 142 bits (357), Expect = 2e-32
Identities = 72/105 (68%), Positives = 81/105 (77%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP SPT+ + +SP A+SPTS P YSPSSP YSP+SP YSPTSP YSP
Sbjct: 1645 SPSY--SPTSPYSPTSPS-YSPT--SPAYSPTS-PSYSPSSPSYSPTSPSYSPTSPSYSP 1698
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP Y+P +P YSPTSP YSPSSP YSPTSP+YSP+SP YSPTSP
Sbjct: 1699 TSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSP 1743
Score = 140 bits (352), Expect = 6e-32
Identities = 79/144 (54%), Positives = 90/144 (62%), Gaps = 10/144 (6%)
Frame = +2
Query: 8 QLPSYMD----GLDFGMTPGRSPISGTPYHEGM-MSPSYMLSPNLRLSPTNDAQFSPYVG 172
Q P Y + G GMTPG S + + MSPS+ P SP SPY
Sbjct: 1494 QTPGYGEWSPSGPPSGMTPGGPSFSPSAQSDASGMSPSWSPMPGSPSSP--GPSMSPYFP 1551
Query: 173 GMAFSPTSSPGYSPSSPGYSPSSPG-----YSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 337
SP++SP YSPSSP Y+ +SPG YSPTSP YSPTSP YSPTSP YSPTSP YS
Sbjct: 1552 S---SPSASPSYSPSSPNYAAASPGGASPGYSPTSPSYSPTSPNYSPTSPRYSPTSPNYS 1608
Query: 338 PSSPGYSPTSPAYSPTSPSYSPTS 409
P+SP YSPTSP+YSPTSP YSPT+
Sbjct: 1609 PTSPNYSPTSPSYSPTSPLYSPTA 1632
Score = 138 bits (347), Expect = 2e-31
Identities = 77/145 (53%), Positives = 93/145 (64%), Gaps = 12/145 (8%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISG----TPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGM 178
P+Y G +PG SP S T + SP Y SPN + N + SP
Sbjct: 1565 PNYAAASPGGASPGYSPTSPSYSPTSPNYSPTSPRYSPTSPNYSPTSPNYSPTSPSYSPT 1624
Query: 179 A--FSPT-----SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 337
+ +SPT SSP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSP+SP+YS
Sbjct: 1625 SPLYSPTATYAPSSPAYSPTSPSYSPTSP-YSPTSPSYSPTSPAYSPTSPSYSPSSPSYS 1683
Query: 338 PSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSPTSP+YSPTSP+Y+P +P
Sbjct: 1684 PTSPSYSPTSPSYSPTSPNYTPATP 1708
Score = 137 bits (346), Expect = 3e-31
Identities = 71/120 (59%), Positives = 84/120 (70%), Gaps = 15/120 (12%)
Frame = +2
Query: 98 SPSY-----MLSPNLRLSPTNDAQFSP----YVGGMAFSPTS------SPGYSPSSPGYS 232
SPSY + SP +P++ A +SP Y +SPTS SP YSP+SP YS
Sbjct: 1618 SPSYSPTSPLYSPTATYAPSSPA-YSPTSPSYSPTSPYSPTSPSYSPTSPAYSPTSPSYS 1676
Query: 233 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PSSP YSPTSP YSPTSP YSPTSP Y+P +P+YSP+SP YSP+SP YSPTSPSYSP+SP
Sbjct: 1677 PSSPSYSPTSPSYSPTSPSYSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSP 1736
Score = 130 bits (327), Expect = 5e-29
Identities = 74/135 (54%), Positives = 85/135 (62%), Gaps = 13/135 (9%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P SP S PY SPSY SP +SP ++SPTS P YSP+SP
Sbjct: 1645 SPSYSPTS--PYSP--TSPSY--SPTSPAYSPTSPSYSP--SSPSYSPTS-PSYSPTSPS 1695
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS---- 394
YSP+SP Y+P +P YSPTSP YSP+SP YSPTSP+YSPSSP YSPTSP+YSPTSPS
Sbjct: 1696 YSPTSPNYTPATPSYSPTSPNYSPSSPHYSPTSPSYSPSSPKYSPTSPSYSPTSPSYGGS 1755
Query: 395 ---------YSPTSP 412
YSPTSP
Sbjct: 1756 PQYTPASPQYSPTSP 1770
Score = 110 bits (274), Expect = 6e-23
Identities = 69/138 (50%), Positives = 81/138 (58%), Gaps = 14/138 (10%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHE------GMMSPSYMLS------PNLRLSPTNDAQ-FSPYVGGMA 181
G TP SP TP+ + G SPS S P+ S +DA SP M
Sbjct: 1478 GATPSMSPAM-TPWQQSQTPGYGEWSPSGPPSGMTPGGPSFSPSAQSDASGMSPSWSPMP 1536
Query: 182 FSPTS-SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 358
SP+S P SP P +SP YSP+SP Y+ SPG + SPGYSPTSP+YSP+SP YS
Sbjct: 1537 GSPSSPGPSMSPYFPSSPSASPSYSPSSPNYAAASPGGA--SPGYSPTSPSYSPTSPNYS 1594
Query: 359 PTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP+YSPTSP
Sbjct: 1595 PTSPRYSPTSPNYSPTSP 1612
Score = 108 bits (269), Expect = 2e-22
Identities = 71/161 (44%), Positives = 84/161 (52%), Gaps = 39/161 (24%)
Frame = +2
Query: 47 TPGRSPISG----TPYHEGMMSPSYMLSPNLRLSPTNDAQF--SPYVGGMAFSPTSSPGY 208
TP SP S + H SPSY S + + SPT+ + SP GG +SP Y
Sbjct: 1707 TPSYSPTSPNYSPSSPHYSPTSPSYSPS-SPKYSPTSPSYSPTSPSYGGSPQYTPASPQY 1765
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPG------------------------------YSP 298
SP+SP YSP+SP YSP+SP +SP S G YSP
Sbjct: 1766 SPTSPKYSPTSPSYSPSSPQHSPGSSGSNFMVNSPTYSPTTARYSPNMSSYSPGSQKYSP 1825
Query: 299 TSPGYSPTSPTYSPSSPGYSPTSPAYSPT---SPSYSPTSP 412
TSP Y+PTSP YSPSSP YSPT YSP+ SP+YSPTSP
Sbjct: 1826 TSPVYTPTSPHYSPSSPAYSPTGQGYSPSSPASPTYSPTSP 1866
Score = 80.1 bits (196), Expect = 7e-14
Identities = 49/102 (48%), Positives = 63/102 (61%), Gaps = 3/102 (2%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P SP S P H S S + + SPT A++SP + ++SP S YSP+SP
Sbjct: 1776 SPSYSPSS--PQHSPGSSGSNFMVNSPTYSPTT-ARYSPNMS--SYSPGSQK-YSPTSPV 1829
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPG---YSPTSPTYSPS 343
Y+P+SP YSP+SP YSPT GYSP+SP YSPTSP+Y S
Sbjct: 1830 YTPTSPHYSPSSPAYSPTGQGYSPSSPASPTYSPTSPSYEDS 1871
Score = 60.5 bits (145), Expect = 6e-08
Identities = 45/122 (36%), Positives = 56/122 (45%), Gaps = 42/122 (34%)
Frame = +2
Query: 173 GMAFSPTSSPGYSPS-SPGYSPSSPGYSPTSP-----GYSPTSPGYSPT--------SPG 310
GM F P ++P SP+ +P +PGY SP G +P P +SP+ SP
Sbjct: 1472 GMFFGPGATPSMSPAMTPWQQSQTPGYGEWSPSGPPSGMTPGGPSFSPSAQSDASGMSPS 1531
Query: 311 YSPTSPTYSPSSPG-----YSPTSPA-----------------------YSPTSPSYSPT 406
+SP SPSSPG Y P+SP+ YSPTSPSYSPT
Sbjct: 1532 WSPMPG--SPSSPGPSMSPYFPSSPSASPSYSPSSPNYAAASPGGASPGYSPTSPSYSPT 1589
Query: 407 SP 412
SP
Sbjct: 1590 SP 1591
[119][TOP]
>UniRef100_O96446 DNA-directed RNA polymerase n=1 Tax=Vairimorpha necatrix
RepID=O96446_9MICR
Length = 1605
Score = 142 bits (357), Expect = 2e-32
Identities = 78/123 (63%), Positives = 88/123 (71%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S T SP+Y SP SPT+ +SP +SPTS P YSP+SP
Sbjct: 1471 SPTYSPTSPT---YSPTSPTYSPTSPTY--SPTSPT-YSPT--SPTYSPTS-PSYSPTSP 1521
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1522 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1581
Query: 404 TSP 412
TSP
Sbjct: 1582 TSP 1584
Score = 138 bits (348), Expect = 2e-31
Identities = 73/119 (61%), Positives = 84/119 (70%), Gaps = 1/119 (0%)
Frame = +2
Query: 59 SPIS-GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSP 235
SP+S G SP+Y++ N R +P +SPTS P YSP+SP YSP
Sbjct: 1436 SPVSENLSISSGNWSPAYLVEGN-RYAPKTSL----------YSPTS-PTYSPTSPTYSP 1483
Query: 236 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1484 TSPTYSPTSPTYSPTSPTYSPTSPTYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1542
Score = 138 bits (347), Expect = 2e-31
Identities = 76/121 (62%), Positives = 87/121 (71%), Gaps = 1/121 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S T SP+Y SP SPT+ +SP ++SPTS P YSP+SP
Sbjct: 1478 SPTYSPTSPT---YSPTSPTYSPTSPTY--SPTSPT-YSPT--SPSYSPTS-PSYSPTSP 1528
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 1529 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 1588
Query: 404 T 406
T
Sbjct: 1589 T 1589
Score = 108 bits (271), Expect = 1e-22
Identities = 65/115 (56%), Positives = 76/115 (66%), Gaps = 5/115 (4%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S T SP+Y SP SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1485 SPTYSPTSPT---YSPTSPTYSPTSPTY--SPTSPS-YSPT--SPSYSPTS-PSYSPTSP 1535
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP----TSPAY 376
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSP SP Y
Sbjct: 1536 SYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTY 1590
[120][TOP]
>UniRef100_C5GKA7 DNA-directed RNA polymerase n=2 Tax=Ajellomyces dermatitidis
RepID=C5GKA7_AJEDR
Length = 1746
Score = 139 bits (350), Expect = 1e-31
Identities = 76/136 (55%), Positives = 93/136 (68%), Gaps = 8/136 (5%)
Frame = +2
Query: 29 GLDFGMTP--GRSPISG----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
G G +P RSP G +P++ SP Y SP+ SPT SP + +
Sbjct: 1547 GFSGGFSPHGARSPGGGYSPTSPFNTSPTSPRY--SPSSGYSPT-----SPGMSITSPRF 1599
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGY--SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SSPG+SP+SP ++P+SP YSPTSPGY SPTSP YSPTSPG+SPTSP+YSP+SP +SP
Sbjct: 1600 MSSPGFSPASPAFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPA 1659
Query: 365 SPAYSPTSPSYSPTSP 412
SPA+SPTSPSYSPTSP
Sbjct: 1660 SPAFSPTSPSYSPTSP 1675
Score = 127 bits (320), Expect = 3e-28
Identities = 76/138 (55%), Positives = 91/138 (65%), Gaps = 16/138 (11%)
Frame = +2
Query: 47 TPGRSPISG-TPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY--S 211
+P SP SG +P GM SP +M SP SP + A F+P A+SPTS PGY S
Sbjct: 1576 SPRYSPSSGYSPTSPGMSITSPRFMSSPGF--SPASPA-FAPT--SPAYSPTS-PGYQQS 1629
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY-----------S 358
P+SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP+SP S
Sbjct: 1630 PTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGISTGRHLSPTS 1689
Query: 359 PTSPAYSPTSPSYSPTSP 412
PTSP Y+PTSP +SPTSP
Sbjct: 1690 PTSPKYTPTSPGWSPTSP 1707
Score = 119 bits (299), Expect = 8e-26
Identities = 75/153 (49%), Positives = 92/153 (60%), Gaps = 28/153 (18%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
F +PG SP S SP+Y SP + SPT+ + +SP G FSPTS P YSP
Sbjct: 1599 FMSSPGFSPASPA---FAPTSPAYSPTSPGYQQSPTSPS-YSPTSPG--FSPTS-PSYSP 1651
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPG------------------YSPTSPGYSPTSP-TYS 337
+SP +SP+SP +SPTSP YSPTSP Y+PTSPG+SPTSP TYS
Sbjct: 1652 TSPSFSPASPAFSPTSPSYSPTSPALGISTGRHLSPTSPTSPKYTPTSPGWSPTSPETYS 1711
Query: 338 PSSPGYS--------PTSPAYSPTSPSYSPTSP 412
P+SP +S PTSP YSPTSP+++PTSP
Sbjct: 1712 PTSPNFSGSPTSPGGPTSPGYSPTSPTFNPTSP 1744
Score = 82.4 bits (202), Expect = 1e-14
Identities = 62/143 (43%), Positives = 77/143 (53%), Gaps = 20/143 (13%)
Frame = +2
Query: 44 MTPGRSPI---SGTPYHEGMMSPSYMLSPNLRL-SPTNDAQFSPYVGGMAFSPTSSPGYS 211
MT G+ + + TPY SP L N+ + SP D+ FSP + +P Y
Sbjct: 1490 MTDGKGLLGDGAATPYDSS--SP---LRDNMYIGSPDPDSNFSPIRQAGSETPAGFTEYQ 1544
Query: 212 PS--SPGYSPSSPGYSPTSPGYSPTSP-GYSPTSPGYSPTSPTYSPSSP----------- 349
PS S G+SP G GYSPTSP SPTSP YSP+S YSP+SP
Sbjct: 1545 PSGFSGGFSPH--GARSPGGGYSPTSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFMS 1601
Query: 350 --GYSPTSPAYSPTSPSYSPTSP 412
G+SP SPA++PTSP+YSPTSP
Sbjct: 1602 SPGFSPASPAFAPTSPAYSPTSP 1624
[121][TOP]
>UniRef100_B6AG69 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
RepID=B6AG69_9CRYT
Length = 1927
Score = 139 bits (349), Expect = 1e-31
Identities = 74/123 (60%), Positives = 87/123 (70%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG P+S + SP+Y SPN + N + SP+ +SPTS P YSP+SP
Sbjct: 1689 SPGVEPLSP---NYSPTSPNYSPTSPNYSPTSPNYSPTSPH-----YSPTS-PHYSPTSP 1739
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP+YSP
Sbjct: 1740 HYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSP 1799
Query: 404 TSP 412
+SP
Sbjct: 1800 SSP 1802
Score = 132 bits (331), Expect = 2e-29
Identities = 68/123 (55%), Positives = 84/123 (68%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P S T H SP Y SP+ + N + SP+ +SPTS P YSP+SP
Sbjct: 1721 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPNYSPTSPH-----YSPTS-PNYSPTSP 1774
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSP+SP YSPTSP+Y+P+SP YSP+SP Y+P SP+YSP
Sbjct: 1775 HYSPTSPNYSPTSPHYSPTSPNYSPSSPHYSPTSPSYNPASPNYSPSSPHYNPASPNYSP 1834
Query: 404 TSP 412
+SP
Sbjct: 1835 SSP 1837
Score = 130 bits (327), Expect = 5e-29
Identities = 61/76 (80%), Positives = 64/76 (84%)
Frame = +2
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SPTS PG P SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPT
Sbjct: 1686 SPTS-PGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYSPTSPHYSPTSPHYSPT 1744
Query: 365 SPAYSPTSPSYSPTSP 412
SP YSPTSP+YSPTSP
Sbjct: 1745 SPHYSPTSPNYSPTSP 1760
Score = 129 bits (324), Expect = 1e-28
Identities = 61/85 (71%), Positives = 64/85 (75%)
Frame = +2
Query: 158 SPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 337
SP G +SSP SP+SPG P SP YSPTSP YSPTSP YSPTSP YSPTSP YS
Sbjct: 1669 SPVYSGDKDGDSSSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSPNYSPTSPHYS 1728
Query: 338 PSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1729 PTSPHYSPTSPHYSPTSPHYSPTSP 1753
Score = 126 bits (317), Expect = 7e-28
Identities = 66/125 (52%), Positives = 81/125 (64%), Gaps = 3/125 (2%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMA--FSPTSSPGYSPS 217
+P S T H SP+Y SP+ + N + SP+ + +SPTS P YSP+
Sbjct: 1735 SPTSPHYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTSPHYSPTSPNYSPTS-PHYSPT 1793
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP YSPSSP YSPTSP Y+P SP YSP+SP Y+P SP YSPSSP Y+P P YSP+SP Y
Sbjct: 1794 SPNYSPSSPHYSPTSPSYNPASPNYSPSSPHYNPASPNYSPSSPQYNPALPNYSPSSPQY 1853
Query: 398 SPTSP 412
+PTSP
Sbjct: 1854 NPTSP 1858
Score = 126 bits (316), Expect = 9e-28
Identities = 65/123 (52%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S H SP+Y SP+ + N + SP+ +SPTS P YSPSSP
Sbjct: 1752 SPNYSPTSP---HYSPTSPNYSPTSPHYSPTSPNYSPTSPH-----YSPTS-PNYSPSSP 1802
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP Y+P SP YSP+SP Y+P SP YSP+SP Y+P+ P YSP+SP Y+PTSP+YSP
Sbjct: 1803 HYSPTSPSYNPASPNYSPSSPHYNPASPNYSPSSPQYNPALPNYSPSSPQYNPTSPNYSP 1862
Query: 404 TSP 412
+SP
Sbjct: 1863 SSP 1865
Score = 112 bits (279), Expect = 2e-23
Identities = 62/128 (48%), Positives = 80/128 (62%), Gaps = 6/128 (4%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S H SP+Y SP+ + N + SP+ +SPTS P Y+P+SP
Sbjct: 1766 SPNYSPTSP---HYSPTSPNYSPTSPHYSPTSPNYSPSSPH-----YSPTS-PSYNPASP 1816
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY-----SPTS 388
YSPSSP Y+P SP YSP+SP Y+P P YSP+SP Y+P+SP YSP+SP Y + S
Sbjct: 1817 NYSPSSPHYNPASPNYSPSSPQYNPALPNYSPSSPQYNPTSPNYSPSSPNYVLSNGNIDS 1876
Query: 389 PSYSPTSP 412
P YSP+SP
Sbjct: 1877 PQYSPSSP 1884
Score = 102 bits (254), Expect = 1e-20
Identities = 62/133 (46%), Positives = 79/133 (59%), Gaps = 12/133 (9%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P SP S H SP+Y S + SPT+ + ++P +SP SSP Y+P+SP
Sbjct: 1780 SPNYSPTSP---HYSPTSPNYSPS-SPHYSPTSPS-YNP--ASPNYSP-SSPHYNPASPN 1831
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY------------SPSSPGYSPTSP 370
YSPSSP Y+P P YSP+SP Y+PTSP YSP+SP Y SPSSP Y +
Sbjct: 1832 YSPSSPQYNPALPNYSPSSPQYNPTSPNYSPSSPNYVLSNGNIDSPQYSPSSPHYDQSVA 1891
Query: 371 AYSPTSPSYSPTS 409
AY PTSPSY+ T+
Sbjct: 1892 AYHPTSPSYTSTN 1904
Score = 84.7 bits (208), Expect = 3e-15
Identities = 58/133 (43%), Positives = 70/133 (52%), Gaps = 18/133 (13%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S H SPSY SPN S + SP +SP SSP Y+P+ P
Sbjct: 1794 SPNYSPSSP---HYSPTSPSYNPASPNYSPSSPHYNPASPN-----YSP-SSPQYNPALP 1844
Query: 224 GYSPSSPGYSPTSPGYSPTSPGY------------SPTSPGYSPTSPTYSPSSPGYSPTS 367
YSPSSP Y+PTSP YSP+SP Y SP+SP Y + Y P+SP Y+ T+
Sbjct: 1845 NYSPSSPQYNPTSPNYSPSSPNYVLSNGNIDSPQYSPSSPHYDQSVAAYHPTSPSYTSTN 1904
Query: 368 PA-----YSPTSP 391
A YSPTSP
Sbjct: 1905 MAAEEAEYSPTSP 1917
Score = 79.7 bits (195), Expect = 9e-14
Identities = 62/161 (38%), Positives = 71/161 (44%), Gaps = 50/161 (31%)
Frame = +2
Query: 80 YHEGMM-SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP----------G 226
Y+ G SP LSP L T++ SP + G FSP SP SP
Sbjct: 1560 YNSGTFDSPMSPLSPMSPLYSTHEPM-SPMISGQ-FSPVQMTPRSPMSPVSPSGILSPMP 1617
Query: 227 YSPSSP-----GYSPTSPGYSPTSPGYSP--------------TSPGYSPTSPTYS---- 337
YSP+SP Y+PTSP Y+ SP Y + YSPTSP YS
Sbjct: 1618 YSPASPTSPLIDYTPTSPIYAVRSPAYGHETEERTKKRYKANIATSAYSPTSPVYSGDKD 1677
Query: 338 ----------------PSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSPTSP YSPTSP+YSPTSP
Sbjct: 1678 GDSSSPFMSPTSPGVEPLSPNYSPTSPNYSPTSPNYSPTSP 1718
[122][TOP]
>UniRef100_C1GHL1 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb18 RepID=C1GHL1_PARBD
Length = 1746
Score = 138 bits (348), Expect = 2e-31
Identities = 77/141 (54%), Positives = 94/141 (66%), Gaps = 6/141 (4%)
Frame = +2
Query: 8 QLPSYMDGLDFGMTPGRSPISG----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGG 175
Q P + G F RSP G +P++ SP Y SP+ SPT SP +
Sbjct: 1545 QAPGFSGG--FSPHGARSPGGGYSPSSPFNTSPTSPRY--SPSSGYSPT-----SPGMSI 1595
Query: 176 MAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY--SPTSPGYSPTSPGYSPTSPTYSPSSP 349
+ SSPG+SP+SP ++P+SP YSPTSPGY SPTSP YSPTSPG+SPTSP+YSP+SP
Sbjct: 1596 TSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSP 1655
Query: 350 GYSPTSPAYSPTSPSYSPTSP 412
+SP SPA+SPTSPSYSPTSP
Sbjct: 1656 SFSPASPAFSPTSPSYSPTSP 1676
Score = 127 bits (318), Expect = 5e-28
Identities = 74/138 (53%), Positives = 88/138 (63%), Gaps = 16/138 (11%)
Frame = +2
Query: 47 TPGRSPISG-TPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY--S 211
+P SP SG +P GM SP +M SP + A SP A+SPTS PGY S
Sbjct: 1577 SPRYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSP-----AYSPTS-PGYQQS 1630
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY-----------S 358
P+SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP+SP S
Sbjct: 1631 PTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTS 1690
Query: 359 PTSPAYSPTSPSYSPTSP 412
PTSP Y+PTSP +SPTSP
Sbjct: 1691 PTSPKYTPTSPGWSPTSP 1708
Score = 120 bits (302), Expect = 4e-26
Identities = 76/153 (49%), Positives = 92/153 (60%), Gaps = 28/153 (18%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
F +PG SP S SP+Y SP + SPT+ + +SP G FSPTS P YSP
Sbjct: 1600 FMSSPGFSPASPV---FAPTSPAYSPTSPGYQQSPTSPS-YSPTSPG--FSPTS-PSYSP 1652
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPG------------------YSPTSPGYSPTSP-TYS 337
+SP +SP+SP +SPTSP YSPTSP Y+PTSPG+SPTSP TYS
Sbjct: 1653 TSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYS 1712
Query: 338 PSSPGYS--------PTSPAYSPTSPSYSPTSP 412
P+SP +S PTSP YSPTSP++SPTSP
Sbjct: 1713 PTSPNFSGSPTSPGGPTSPGYSPTSPTFSPTSP 1745
Score = 98.6 bits (244), Expect = 2e-19
Identities = 71/156 (45%), Positives = 82/156 (52%), Gaps = 30/156 (19%)
Frame = +2
Query: 35 DFGMTP--GRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
D TP SP+ Y G P SP + A F+ Y +P S G+
Sbjct: 1500 DGAATPYDSNSPLQDNMYI-GTPDPDSAFSPIRQAGSETPAGFTEYQ-----APGFSGGF 1553
Query: 209 SPS---SPG--YSPSSP-GYSPTSPGYSPTSPGYSPTSPG-------------------- 310
SP SPG YSPSSP SPTSP YSP+S GYSPTSPG
Sbjct: 1554 SPHGARSPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPV 1612
Query: 311 YSPTSPTYSPSSPGY--SPTSPAYSPTSPSYSPTSP 412
++PTSP YSP+SPGY SPTSP+YSPTSP +SPTSP
Sbjct: 1613 FAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSP 1648
[123][TOP]
>UniRef100_C0SE75 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb03 RepID=C0SE75_PARBP
Length = 2106
Score = 138 bits (348), Expect = 2e-31
Identities = 77/141 (54%), Positives = 94/141 (66%), Gaps = 6/141 (4%)
Frame = +2
Query: 8 QLPSYMDGLDFGMTPGRSPISG----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGG 175
Q P + G F RSP G +P++ SP Y SP+ SPT SP +
Sbjct: 1545 QAPGFSGG--FSPHGARSPGGGYSPSSPFNTSPTSPRY--SPSSGYSPT-----SPGMSI 1595
Query: 176 MAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY--SPTSPGYSPTSPGYSPTSPTYSPSSP 349
+ SSPG+SP+SP ++P+SP YSPTSPGY SPTSP YSPTSPG+SPTSP+YSP+SP
Sbjct: 1596 TSPRFMSSPGFSPASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPSYSPTSP 1655
Query: 350 GYSPTSPAYSPTSPSYSPTSP 412
+SP SPA+SPTSPSYSPTSP
Sbjct: 1656 SFSPASPAFSPTSPSYSPTSP 1676
Score = 127 bits (318), Expect = 5e-28
Identities = 74/138 (53%), Positives = 88/138 (63%), Gaps = 16/138 (11%)
Frame = +2
Query: 47 TPGRSPISG-TPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY--S 211
+P SP SG +P GM SP +M SP + A SP A+SPTS PGY S
Sbjct: 1577 SPRYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSP-----AYSPTS-PGYQQS 1630
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY-----------S 358
P+SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP+SP S
Sbjct: 1631 PTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTS 1690
Query: 359 PTSPAYSPTSPSYSPTSP 412
PTSP Y+PTSP +SPTSP
Sbjct: 1691 PTSPKYTPTSPGWSPTSP 1708
Score = 116 bits (291), Expect = 7e-25
Identities = 74/151 (49%), Positives = 90/151 (59%), Gaps = 28/151 (18%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
F +PG SP S SP+Y SP + SPT+ + +SP G FSPTS P YSP
Sbjct: 1600 FMSSPGFSPASPV---FAPTSPAYSPTSPGYQQSPTSPS-YSPTSPG--FSPTS-PSYSP 1652
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPG------------------YSPTSPGYSPTSP-TYS 337
+SP +SP+SP +SPTSP YSPTSP Y+PTSPG+SPTSP TYS
Sbjct: 1653 TSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYS 1712
Query: 338 PSSPGYS--------PTSPAYSPTSPSYSPT 406
P+SP +S PTSP YSPTSP++SPT
Sbjct: 1713 PTSPNFSGSPTSPGGPTSPGYSPTSPTFSPT 1743
Score = 98.6 bits (244), Expect = 2e-19
Identities = 71/156 (45%), Positives = 82/156 (52%), Gaps = 30/156 (19%)
Frame = +2
Query: 35 DFGMTP--GRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
D TP SP+ Y G P SP + A F+ Y +P S G+
Sbjct: 1500 DGAATPYDSNSPLQDNMYI-GTPDPDSAFSPIRQAGSETPAGFTEYQ-----APGFSGGF 1553
Query: 209 SPS---SPG--YSPSSP-GYSPTSPGYSPTSPGYSPTSPG-------------------- 310
SP SPG YSPSSP SPTSP YSP+S GYSPTSPG
Sbjct: 1554 SPHGARSPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPV 1612
Query: 311 YSPTSPTYSPSSPGY--SPTSPAYSPTSPSYSPTSP 412
++PTSP YSP+SPGY SPTSP+YSPTSP +SPTSP
Sbjct: 1613 FAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSP 1648
[124][TOP]
>UniRef100_Q0D054 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0D054_ASPTN
Length = 1742
Score = 137 bits (346), Expect = 3e-31
Identities = 71/123 (57%), Positives = 84/123 (68%), Gaps = 3/123 (2%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYS 232
G SP G+P+ G SPSY SP+ SPT+ G+ +SPG+SP+SP +
Sbjct: 1565 GYSP--GSPFSGGATSPSY--SPSSSYSPTSPGM------GITSPRMTSPGFSPASPAFG 1614
Query: 233 PSSPGYSPTSPGY---SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
P+SP YSPTSP Y SPTSP YSPTSPG+SPTSP YSP+SP SP SP +SPTSPSYSP
Sbjct: 1615 PTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPNLSPASPVFSPTSPSYSP 1674
Query: 404 TSP 412
TSP
Sbjct: 1675 TSP 1677
Score = 106 bits (264), Expect = 9e-22
Identities = 68/138 (49%), Positives = 79/138 (57%), Gaps = 12/138 (8%)
Frame = +2
Query: 35 DFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSP---YVGGMAFSPTSSPG 205
D G S GTP + SP SP ++ P + GG + +PTS G
Sbjct: 1509 DTGSPMQESAYIGTPDPDSNFSPIRQAGAE---SPGGFTEYQPTAGFGGGFSPAPTSPLG 1565
Query: 206 YSPSSP-GYSPSSPGYSPTSPGYSPTSPGY---SP--TSPGYSPTSPTYSPSSPGYSPTS 367
YSP SP +SP YSP+S YSPTSPG SP TSPG+SP SP + P+SP YSPTS
Sbjct: 1566 YSPGSPFSGGATSPSYSPSS-SYSPTSPGMGITSPRMTSPGFSPASPAFGPTSPAYSPTS 1624
Query: 368 PAY---SPTSPSYSPTSP 412
PAY SPTSPSYSPTSP
Sbjct: 1625 PAYGQASPTSPSYSPTSP 1642
Score = 55.1 bits (131), Expect = 2e-06
Identities = 37/74 (50%), Positives = 45/74 (60%), Gaps = 11/74 (14%)
Frame = +2
Query: 98 SPSYM-----LSPNLRLSPTNDA--QFSPYVGGMAFSPTSSPGYSPSSP--GYSPSSPG- 247
SPSY L +SPT+ +++P G +SPTS YSP+SP G SP+SPG
Sbjct: 1669 SPSYSPTSPALGAGRNMSPTSPTSPKYTPTSPG--WSPTSPQSYSPTSPNIGGSPTSPGG 1726
Query: 248 -YSPTSPGYSPTSP 286
YSPTSP YSPTSP
Sbjct: 1727 AYSPTSPTYSPTSP 1740
[125][TOP]
>UniRef100_C8VQG7 DNA-directed RNA polymerase (EC 2.7.7.6)
[Source:UniProtKB/TrEMBL;Acc:Q873Q6] n=2 Tax=Emericella
nidulans RepID=C8VQG7_EMENI
Length = 1745
Score = 137 bits (345), Expect = 4e-31
Identities = 73/123 (59%), Positives = 86/123 (69%), Gaps = 3/123 (2%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYS 232
G SP S P+ SP Y SP SPT SP +G + +SPG+SP+SP ++
Sbjct: 1563 GYSPSS--PFSANPTSPGY--SPTSSYSPT-----SPGMGITSPRFMTSPGFSPASPSFA 1613
Query: 233 PSSPGYSPTSPGY---SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
P+SP YSPTSP Y SPTSP YSPTSPG+SPTSP YSP+SP +SPTSPA+SPTSPSYSP
Sbjct: 1614 PTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSYSP 1673
Query: 404 TSP 412
TSP
Sbjct: 1674 TSP 1676
Score = 130 bits (326), Expect = 6e-29
Identities = 73/137 (53%), Positives = 88/137 (64%), Gaps = 15/137 (10%)
Frame = +2
Query: 47 TPGRSPISG---TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY--- 208
+PG SP S T G+ SP +M SP + + A SP A+SPTS P Y
Sbjct: 1576 SPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSP-----AYSPTS-PAYGQA 1629
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY---------SP 361
SP+SP YSP+SPG+SPTSP YSPTSP +SPTSP +SPTSP+YSP+SP SP
Sbjct: 1630 SPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSPAFSPTSPSYSPTSPAIGGARHLSPTSP 1689
Query: 362 TSPAYSPTSPSYSPTSP 412
TSP Y+PTSP +SPTSP
Sbjct: 1690 TSPKYTPTSPGWSPTSP 1706
Score = 120 bits (300), Expect = 6e-26
Identities = 73/158 (46%), Positives = 85/158 (53%), Gaps = 32/158 (20%)
Frame = +2
Query: 35 DFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP--TSSPGY 208
D G S GTP + SP +P ++ P G FSP TS GY
Sbjct: 1508 DTGSPMQESAYIGTPDPDSNFSPIRQAGAE---TPGGFTEYQPSGGFGGFSPAATSPAGY 1564
Query: 209 SPS--------SPGYSP-------------------SSPGYSPTSPGYSPTSPGYSPTSP 307
SPS SPGYSP +SPG+SP SP ++PTSP YSPTSP
Sbjct: 1565 SPSSPFSANPTSPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSP 1624
Query: 308 GY---SPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
Y SPTSP+YSP+SPG+SPTSP YSPTSPS+SPTSP
Sbjct: 1625 AYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPTSP 1662
Score = 86.7 bits (213), Expect = 8e-16
Identities = 56/108 (51%), Positives = 70/108 (64%), Gaps = 7/108 (6%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMA-FSPTS--SPGYSP 214
+PG SP S + SPS+ SP + + + SP +GG SPTS SP Y+P
Sbjct: 1640 SPGFSPTSP---NYSPTSPSFSPTSPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYTP 1696
Query: 215 SSPGYSPSSPG-YSPTSPGY--SPTSPGYSPTSPGYSPTSPTYSPSSP 349
+SPG+SP+SP YSPTSP + SPTSPG PTSPGYSPTSP +SP+SP
Sbjct: 1697 TSPGWSPTSPQTYSPTSPNFAGSPTSPG-GPTSPGYSPTSPAFSPTSP 1743
[126][TOP]
>UniRef100_C6HNU4 DNA-directed RNA polymerase II n=1 Tax=Ajellomyces capsulatus H143
RepID=C6HNU4_AJECH
Length = 668
Score = 137 bits (344), Expect = 5e-31
Identities = 75/136 (55%), Positives = 92/136 (67%), Gaps = 8/136 (5%)
Frame = +2
Query: 29 GLDFGMTP--GRSPISG----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
G G +P RSP G +P++ SP Y SP+ SPT SP + +
Sbjct: 469 GFSGGFSPHGARSPGGGYSPSSPFNTSPTSPRY--SPSSGYSPT-----SPGMSITSPRF 521
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGY--SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SSPG+SP+SP ++P+SP YSPTSP Y SPTSP YSPTSPG+SPTSP+YSP+SP +SP
Sbjct: 522 MSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPA 581
Query: 365 SPAYSPTSPSYSPTSP 412
SPA+SPTSPSYSPTSP
Sbjct: 582 SPAFSPTSPSYSPTSP 597
Score = 125 bits (314), Expect = 1e-27
Identities = 75/138 (54%), Positives = 90/138 (65%), Gaps = 16/138 (11%)
Frame = +2
Query: 47 TPGRSPISG-TPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY--S 211
+P SP SG +P GM SP +M SP SP + A F+P A+SPTS P Y S
Sbjct: 498 SPRYSPSSGYSPTSPGMSITSPRFMSSPGF--SPASPA-FAPT--SPAYSPTS-PSYQQS 551
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY-----------S 358
P+SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP+SP S
Sbjct: 552 PTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTS 611
Query: 359 PTSPAYSPTSPSYSPTSP 412
PTSP Y+PTSP +SPTSP
Sbjct: 612 PTSPKYTPTSPGWSPTSP 629
Score = 117 bits (294), Expect = 3e-25
Identities = 74/153 (48%), Positives = 92/153 (60%), Gaps = 28/153 (18%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
F +PG SP S SP+Y SP+ + SPT+ + +SP G FSPTS P YSP
Sbjct: 521 FMSSPGFSPASPA---FAPTSPAYSPTSPSYQQSPTSPS-YSPTSPG--FSPTS-PSYSP 573
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPG------------------YSPTSPGYSPTSP-TYS 337
+SP +SP+SP +SPTSP YSPTSP Y+PTSPG+SPTSP TYS
Sbjct: 574 TSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYS 633
Query: 338 PSSPGYS--------PTSPAYSPTSPSYSPTSP 412
P+SP +S PTSP YSPTSP+++P SP
Sbjct: 634 PTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISP 666
Score = 79.3 bits (194), Expect = 1e-13
Identities = 57/132 (43%), Positives = 72/132 (54%), Gaps = 17/132 (12%)
Frame = +2
Query: 68 SGTPYHEGMMSPSYMLSPNLRL-SPTNDAQFSPYVGGMAFSPTSSPGYSPS--SPGYSPS 238
+ TPY SP L N+ + +P D+ FSP + +P Y PS S G+SP
Sbjct: 423 AATPYDSS--SP---LQDNMYIGTPDPDSNFSPIRQAGSETPAGFTEYQPSGFSGGFSPH 477
Query: 239 SPGYSPTSPGYSPTSP-GYSPTSPGYSPTSPTYSPSSP-------------GYSPTSPAY 376
G GYSP+SP SPTSP YSP+S YSP+SP G+SP SPA+
Sbjct: 478 --GARSPGGGYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFMSSPGFSPASPAF 534
Query: 377 SPTSPSYSPTSP 412
+PTSP+YSPTSP
Sbjct: 535 APTSPAYSPTSP 546
[127][TOP]
>UniRef100_C0NEY2 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
RepID=C0NEY2_AJECG
Length = 1234
Score = 137 bits (344), Expect = 5e-31
Identities = 75/136 (55%), Positives = 92/136 (67%), Gaps = 8/136 (5%)
Frame = +2
Query: 29 GLDFGMTP--GRSPISG----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
G G +P RSP G +P++ SP Y SP+ SPT SP + +
Sbjct: 1035 GFSGGFSPHGARSPGGGYSPSSPFNTSPTSPRY--SPSSGYSPT-----SPGMSITSPRF 1087
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGY--SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SSPG+SP+SP ++P+SP YSPTSP Y SPTSP YSPTSPG+SPTSP+YSP+SP +SP
Sbjct: 1088 MSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPA 1147
Query: 365 SPAYSPTSPSYSPTSP 412
SPA+SPTSPSYSPTSP
Sbjct: 1148 SPAFSPTSPSYSPTSP 1163
Score = 125 bits (314), Expect = 1e-27
Identities = 75/138 (54%), Positives = 90/138 (65%), Gaps = 16/138 (11%)
Frame = +2
Query: 47 TPGRSPISG-TPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY--S 211
+P SP SG +P GM SP +M SP SP + A F+P A+SPTS P Y S
Sbjct: 1064 SPRYSPSSGYSPTSPGMSITSPRFMSSPGF--SPASPA-FAPT--SPAYSPTS-PSYQQS 1117
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY-----------S 358
P+SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP+SP S
Sbjct: 1118 PTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTS 1177
Query: 359 PTSPAYSPTSPSYSPTSP 412
PTSP Y+PTSP +SPTSP
Sbjct: 1178 PTSPKYTPTSPGWSPTSP 1195
Score = 117 bits (294), Expect = 3e-25
Identities = 74/153 (48%), Positives = 92/153 (60%), Gaps = 28/153 (18%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
F +PG SP S SP+Y SP+ + SPT+ + +SP G FSPTS P YSP
Sbjct: 1087 FMSSPGFSPASPA---FAPTSPAYSPTSPSYQQSPTSPS-YSPTSPG--FSPTS-PSYSP 1139
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPG------------------YSPTSPGYSPTSP-TYS 337
+SP +SP+SP +SPTSP YSPTSP Y+PTSPG+SPTSP TYS
Sbjct: 1140 TSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYS 1199
Query: 338 PSSPGYS--------PTSPAYSPTSPSYSPTSP 412
P+SP +S PTSP YSPTSP+++P SP
Sbjct: 1200 PTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISP 1232
Score = 79.3 bits (194), Expect = 1e-13
Identities = 57/132 (43%), Positives = 72/132 (54%), Gaps = 17/132 (12%)
Frame = +2
Query: 68 SGTPYHEGMMSPSYMLSPNLRL-SPTNDAQFSPYVGGMAFSPTSSPGYSPS--SPGYSPS 238
+ TPY SP L N+ + +P D+ FSP + +P Y PS S G+SP
Sbjct: 989 AATPYDSS--SP---LQDNMYIGTPDPDSNFSPIRQAGSETPAGFTEYQPSGFSGGFSPH 1043
Query: 239 SPGYSPTSPGYSPTSP-GYSPTSPGYSPTSPTYSPSSP-------------GYSPTSPAY 376
G GYSP+SP SPTSP YSP+S YSP+SP G+SP SPA+
Sbjct: 1044 --GARSPGGGYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFMSSPGFSPASPAF 1100
Query: 377 SPTSPSYSPTSP 412
+PTSP+YSPTSP
Sbjct: 1101 APTSPAYSPTSP 1112
[128][TOP]
>UniRef100_A6QYA7 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
RepID=A6QYA7_AJECN
Length = 1747
Score = 137 bits (344), Expect = 5e-31
Identities = 75/136 (55%), Positives = 92/136 (67%), Gaps = 8/136 (5%)
Frame = +2
Query: 29 GLDFGMTP--GRSPISG----TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
G G +P RSP G +P++ SP Y SP+ SPT SP + +
Sbjct: 1548 GFSGGFSPHGARSPGGGYSPSSPFNTSPTSPRY--SPSSGYSPT-----SPGMSITSPRF 1600
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGY--SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SSPG+SP+SP ++P+SP YSPTSP Y SPTSP YSPTSPG+SPTSP+YSP+SP +SP
Sbjct: 1601 MSSPGFSPASPAFAPTSPAYSPTSPSYQQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPA 1660
Query: 365 SPAYSPTSPSYSPTSP 412
SPA+SPTSPSYSPTSP
Sbjct: 1661 SPAFSPTSPSYSPTSP 1676
Score = 125 bits (314), Expect = 1e-27
Identities = 75/138 (54%), Positives = 90/138 (65%), Gaps = 16/138 (11%)
Frame = +2
Query: 47 TPGRSPISG-TPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY--S 211
+P SP SG +P GM SP +M SP SP + A F+P A+SPTS P Y S
Sbjct: 1577 SPRYSPSSGYSPTSPGMSITSPRFMSSPGF--SPASPA-FAPT--SPAYSPTS-PSYQQS 1630
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY-----------S 358
P+SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP+SP S
Sbjct: 1631 PTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTS 1690
Query: 359 PTSPAYSPTSPSYSPTSP 412
PTSP Y+PTSP +SPTSP
Sbjct: 1691 PTSPKYTPTSPGWSPTSP 1708
Score = 117 bits (294), Expect = 3e-25
Identities = 74/153 (48%), Positives = 92/153 (60%), Gaps = 28/153 (18%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
F +PG SP S SP+Y SP+ + SPT+ + +SP G FSPTS P YSP
Sbjct: 1600 FMSSPGFSPASPA---FAPTSPAYSPTSPSYQQSPTSPS-YSPTSPG--FSPTS-PSYSP 1652
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPG------------------YSPTSPGYSPTSP-TYS 337
+SP +SP+SP +SPTSP YSPTSP Y+PTSPG+SPTSP TYS
Sbjct: 1653 TSPSFSPASPAFSPTSPSYSPTSPALGVSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYS 1712
Query: 338 PSSPGYS--------PTSPAYSPTSPSYSPTSP 412
P+SP +S PTSP YSPTSP+++P SP
Sbjct: 1713 PTSPNFSGSPTSPGGPTSPGYSPTSPTFNPISP 1745
Score = 79.3 bits (194), Expect = 1e-13
Identities = 57/132 (43%), Positives = 72/132 (54%), Gaps = 17/132 (12%)
Frame = +2
Query: 68 SGTPYHEGMMSPSYMLSPNLRL-SPTNDAQFSPYVGGMAFSPTSSPGYSPS--SPGYSPS 238
+ TPY SP L N+ + +P D+ FSP + +P Y PS S G+SP
Sbjct: 1502 AATPYDSS--SP---LQDNMYIGTPDPDSNFSPIRQAGSETPAGFTEYQPSGFSGGFSPH 1556
Query: 239 SPGYSPTSPGYSPTSP-GYSPTSPGYSPTSPTYSPSSP-------------GYSPTSPAY 376
G GYSP+SP SPTSP YSP+S YSP+SP G+SP SPA+
Sbjct: 1557 --GARSPGGGYSPSSPFNTSPTSPRYSPSSG-YSPTSPGMSITSPRFMSSPGFSPASPAF 1613
Query: 377 SPTSPSYSPTSP 412
+PTSP+YSPTSP
Sbjct: 1614 APTSPAYSPTSP 1625
[129][TOP]
>UniRef100_B6H9U6 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6H9U6_PENCW
Length = 1733
Score = 136 bits (343), Expect = 6e-31
Identities = 73/123 (59%), Positives = 86/123 (69%), Gaps = 3/123 (2%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYS 232
G SP S P++ SP Y SP+ SPT SP +G M +SPG+SP+SP +
Sbjct: 1559 GYSPTS--PFNTSPTSPGY--SPSSSYSPT-----SPGIGMM-----TSPGFSPASPTFQ 1604
Query: 233 PSSPGYSPTSPGY---SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
P+SP YSPTSP Y SPTSP YSPTSPG+SPTSP YSP+SP +SP SPA+SPTSPSYSP
Sbjct: 1605 PTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSP 1664
Query: 404 TSP 412
TSP
Sbjct: 1665 TSP 1667
Score = 121 bits (303), Expect = 3e-26
Identities = 75/151 (49%), Positives = 90/151 (59%), Gaps = 23/151 (15%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
G+ +PG SP S T SP+Y SP + +SP G FSPTS P
Sbjct: 1587 GIGMMTSPGFSPASPTFQPT---SPAYSPTSPAYGQASPTSPSYSPTSPG--FSPTS-PN 1640
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPG----------------YSPTSPGYSPTSP-TY 334
YSP+SP +SP+SP +SPTSP YSPTSP Y+PTSPG+SPTSP +Y
Sbjct: 1641 YSPTSPSFSPASPAFSPTSPSYSPTSPAIGGARHLSPTSPTSPKYTPTSPGWSPTSPQSY 1700
Query: 335 SPSSPGYS-----PTSPAYSPTSPSYSPTSP 412
SP+SP +S PTSPAYSPTSP+YSPTSP
Sbjct: 1701 SPTSPNFSGSPTSPTSPAYSPTSPAYSPTSP 1731
Score = 111 bits (278), Expect = 2e-23
Identities = 66/129 (51%), Positives = 81/129 (62%), Gaps = 11/129 (8%)
Frame = +2
Query: 59 SPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPY------VGGMAFSPTSSPGYSPSS 220
SP++ +PY G P+ SP ++ + Y GG + + S GYSP+S
Sbjct: 1506 SPMASSPYMAGG-DPNSTFSPMHQIGQEPTGGLTEYQATTSTFGGFSPAARSPGGYSPTS 1564
Query: 221 P-GYSPSSPGYSPTSPGYSPTSPGYS-PTSPGYSPTSPTYSPSSPGYSPTSPAY---SPT 385
P SP+SPGYSP+S YSPTSPG TSPG+SP SPT+ P+SP YSPTSPAY SPT
Sbjct: 1565 PFNTSPTSPGYSPSS-SYSPTSPGIGMMTSPGFSPASPTFQPTSPAYSPTSPAYGQASPT 1623
Query: 386 SPSYSPTSP 412
SPSYSPTSP
Sbjct: 1624 SPSYSPTSP 1632
[130][TOP]
>UniRef100_Q9C428 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis
macrandra RepID=Q9C428_9FUNG
Length = 1603
Score = 136 bits (342), Expect = 8e-31
Identities = 73/128 (57%), Positives = 90/128 (70%), Gaps = 7/128 (5%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEG-MMSPSYMLSPNLRLSPTNDAQFS---PYVGGMAF---SPTSS 199
GM+ G+SP + T + +M+ + SP+ + A F P++ F SPTS
Sbjct: 1477 GMSGGQSPYASTHRCDPRLMNKRSLRSPSSPVYSMWLASFGLLQPFLIVRCFGVISPTS- 1535
Query: 200 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
PGYSP+SP YSP+SP Y+PTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YS
Sbjct: 1536 PGYSPTSPSYSPTSPSYTPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS 1595
Query: 380 PTSPSYSP 403
PTSPSYSP
Sbjct: 1596 PTSPSYSP 1603
Score = 123 bits (309), Expect = 6e-27
Identities = 72/149 (48%), Positives = 82/149 (55%), Gaps = 27/149 (18%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLS--PNLRLSPTNDAQFSPYVGGMAFSP---TSSPGYS 211
+PG +P P + M SP + S R +P SPY P S
Sbjct: 1444 SPGGAPYENYPGDQPMFSPIGVDSGRDTGRWTPGMSGGQSPYASTHRCDPRLMNKRSLRS 1503
Query: 212 PSSPGYS----------------------PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTS 325
PSSP YS P+SPGYSPTSP YSPTSP Y+PTSP YSPTS
Sbjct: 1504 PSSPVYSMWLASFGLLQPFLIVRCFGVISPTSPGYSPTSPSYSPTSPSYTPTSPSYSPTS 1563
Query: 326 PTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 1564 PSYSPTSPSYSPTSPSYSPTSPSYSPTSP 1592
[131][TOP]
>UniRef100_Q7Q3C6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
RepID=Q7Q3C6_ANOGA
Length = 1878
Score = 135 bits (341), Expect = 1e-30
Identities = 75/142 (52%), Positives = 89/142 (62%), Gaps = 9/142 (6%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQF-SPYVG--GMAF 184
P Y G +P I + SPSY SP + PT+ + F SP ++
Sbjct: 1602 PQYSPGSS-NYSPSSPNIHSATQNYSPTSPSY--SPMSPMHPTSASNFASPGYSPTSPSY 1658
Query: 185 SPTS------SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSS 346
SPTS SP +SP+SP YSPSSP YSPTSP YSPTSP YSPTSP ++P +P+YSPSS
Sbjct: 1659 SPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSS 1718
Query: 347 PGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSP SPSYSP+SP
Sbjct: 1719 PNYSPTSPHYSPASPSYSPSSP 1740
Score = 135 bits (340), Expect = 1e-30
Identities = 79/134 (58%), Positives = 89/134 (66%), Gaps = 12/134 (8%)
Frame = +2
Query: 47 TPGRSPISGTPYH----EGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+P SP+S P H SP Y SP+ SPT+ + +SP FSPTS P YS
Sbjct: 1629 SPSYSPMS--PMHPTSASNFASPGYSPTSPSY--SPTSPS-YSP--SSPVFSPTS-PSYS 1680
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPG-------YSPTSPGYSPTSPTYSPSSPGYSPTSP 370
PSSP YSP+SP YSPTSP YSPTSP YSP+SP YSPTSP YSP+SP YSP+SP
Sbjct: 1681 PSSPSYSPTSPSYSPTSPSYSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSSP 1740
Query: 371 AYSPTSPSYSPTSP 412
YSPTSPSYSPTSP
Sbjct: 1741 KYSPTSPSYSPTSP 1754
Score = 128 bits (321), Expect = 2e-28
Identities = 71/128 (55%), Positives = 88/128 (68%), Gaps = 6/128 (4%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+PG SP S + SPSY S + SPT+ + +SP ++SPTS P YSP+SP
Sbjct: 1648 SPGYSPTSPS---YSPTSPSYSPSSPV-FSPTSPS-YSP--SSPSYSPTS-PSYSPTSPS 1699
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS---- 394
YSP+SP ++P +P YSP+SP YSPTSP YSP SP+YSPSSP YSPTSP+YSPTSPS
Sbjct: 1700 YSPTSPNFTPVTPSYSPSSPNYSPTSPHYSPASPSYSPSSPKYSPTSPSYSPTSPSYIGS 1759
Query: 395 --YSPTSP 412
Y+P SP
Sbjct: 1760 PHYTPASP 1767
Score = 123 bits (308), Expect = 7e-27
Identities = 81/178 (45%), Positives = 93/178 (52%), Gaps = 54/178 (30%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGM-MSPSYMLSPNLRLSPTNDA-QFSPYVGGMAFSPTSSPGYSP 214
GMTPG S + + MSPS SP +R SP++ SPY SP+ SP YSP
Sbjct: 1519 GMTPGGPSFSPSAQSDASGMSPSSW-SP-IRGSPSSPGPSMSPYPPS---SPSMSPSYSP 1573
Query: 215 SSPGYSPSSPG-----YSPTSPGYSP---------------------------------- 277
SSP Y+P+SPG YSPTSPGYSP
Sbjct: 1574 SSPNYAPNSPGGASPSYSPTSPGYSPPSPQYSPGSSNYSPSSPNIHSATQNYSPTSPSYS 1633
Query: 278 -------------TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPGYSPTSP YSPTSP+YSPSSP +SPTSP+YSP+SPSYSPTSP
Sbjct: 1634 PMSPMHPTSASNFASPGYSPTSPSYSPTSPSYSPSSPVFSPTSPSYSPSSPSYSPTSP 1691
Score = 111 bits (277), Expect = 3e-23
Identities = 73/163 (44%), Positives = 88/163 (53%), Gaps = 40/163 (24%)
Frame = +2
Query: 44 MTPGRSP----ISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSP----YVGGMAFSPTS- 196
+TP SP S T H SPSY S + + SPT+ + +SP Y+G ++P S
Sbjct: 1710 VTPSYSPSSPNYSPTSPHYSPASPSYSPS-SPKYSPTSPS-YSPTSPSYIGSPHYTPASP 1767
Query: 197 -----SPGYSPSSPGYSPSSPG-----------------------YSPTSPGYSPTSPGY 292
SP YSP+SP YSPSSP YSP YSP+SP Y
Sbjct: 1768 QYGQASPNYSPTSPSYSPSSPQHSPGSSSNHYSIGSSSYSQTPAPYSPNMSSYSPSSPKY 1827
Query: 293 SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT---SPSYSPTSP 412
SPTSP Y+ +SPTYSPSSP YSPT YSP+ SP+YSPTSP
Sbjct: 1828 SPTSPVYTSSSPTYSPSSPAYSPTPQGYSPSSPASPTYSPTSP 1870
Score = 94.7 bits (234), Expect = 3e-18
Identities = 59/134 (44%), Positives = 76/134 (56%), Gaps = 20/134 (14%)
Frame = +2
Query: 47 TPGRSPIS----GTPYHE------GMMSPSYMLSPNLRLSPTNDAQFSP-------YVGG 175
+P SP S G+P++ G SP+Y SP + Q SP +G
Sbjct: 1746 SPSYSPTSPSYIGSPHYTPASPQYGQASPNY--SPTSPSYSPSSPQHSPGSSSNHYSIGS 1803
Query: 176 MAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG- 352
++S T +P YSP+ YSPSSP YSPTSP Y+ +SP YSP+SP YSPT YSPSSP
Sbjct: 1804 SSYSQTPAP-YSPNMSSYSPSSPKYSPTSPVYTSSSPTYSPSSPAYSPTPQGYSPSSPAS 1862
Query: 353 --YSPTSPAYSPTS 388
YSPTSP+Y ++
Sbjct: 1863 PTYSPTSPSYDDSN 1876
Score = 65.1 bits (157), Expect = 2e-09
Identities = 46/109 (42%), Positives = 59/109 (54%), Gaps = 29/109 (26%)
Frame = +2
Query: 173 GMAFSPTSSPGYSPSSPGY---SPSSP--GYSPTSPGYSPT--------SPGY------S 295
G A +P+ +P ++PGY SPS P G +P P +SP+ SP S
Sbjct: 1490 GSAATPSMTPWQQSATPGYGGWSPSGPASGMTPGGPSFSPSAQSDASGMSPSSWSPIRGS 1549
Query: 296 PTSPG-----YSPTSPTYSPSSPGYSPTSPAYSP-----TSPSYSPTSP 412
P+SPG Y P+SP+ SPS YSP+SP Y+P SPSYSPTSP
Sbjct: 1550 PSSPGPSMSPYPPSSPSMSPS---YSPSSPNYAPNSPGGASPSYSPTSP 1595
[132][TOP]
>UniRef100_Q5CUJ2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cryptosporidium parvum
Iowa II RepID=Q5CUJ2_CRYPV
Length = 1902
Score = 134 bits (337), Expect = 3e-30
Identities = 72/117 (61%), Positives = 82/117 (70%), Gaps = 1/117 (0%)
Frame = +2
Query: 65 ISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSS 241
+S T H SP Y SP+ + + + SP+ +SPTS P YSP+SP YSP+S
Sbjct: 1682 LSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPH-----YSPTS-PHYSPTSPHYSPTS 1735
Query: 242 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1736 PHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1792
Score = 133 bits (334), Expect = 7e-30
Identities = 72/123 (58%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P S T H SP Y SP+ + + + SP+ +SPTS P YSP+SP
Sbjct: 1704 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPH-----YSPTS-PHYSPTSP 1757
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSPSSP YSPTSP YSPTSP+Y+P
Sbjct: 1758 HYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNP 1817
Query: 404 TSP 412
SP
Sbjct: 1818 ASP 1820
Score = 132 bits (333), Expect = 9e-30
Identities = 67/100 (67%), Positives = 77/100 (77%)
Frame = +2
Query: 113 LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGY 292
+SP+L + + + SP+ +SPTS P YSP+SP YSP+SP YSPTSP YSPTSP Y
Sbjct: 1678 ISPDLSPTSPHYSPTSPH-----YSPTS-PHYSPTSPHYSPTSPHYSPTSPHYSPTSPHY 1731
Query: 293 SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1732 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1771
Score = 127 bits (319), Expect = 4e-28
Identities = 69/122 (56%), Positives = 82/122 (67%), Gaps = 1/122 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P S T H SP Y SP+ + + + SP+ +SPTS P YSP+SP
Sbjct: 1711 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPH-----YSPTS-PHYSPTSP 1764
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP YSPTSP Y+P SP+YSP
Sbjct: 1765 HYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSP 1824
Query: 404 TS 409
TS
Sbjct: 1825 TS 1826
Score = 107 bits (268), Expect = 3e-22
Identities = 70/144 (48%), Positives = 77/144 (53%), Gaps = 26/144 (18%)
Frame = +2
Query: 59 SPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP----- 223
SP+ TP SP +SP SP + SP M ++PTS P Y+ SSP
Sbjct: 1592 SPVQMTP-----RSPMSPVSPGGIFSPVPYSPMSPSSPLMDYTPTS-PIYAASSPTYNTE 1645
Query: 224 ----------------GYSPSSP-----GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 340
YSPSSP S SP SPTSP YSPTSP YSPTSP YSP
Sbjct: 1646 VSERARKKYKVNNTLSSYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSP 1705
Query: 341 SSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1706 TSPHYSPTSPHYSPTSPHYSPTSP 1729
Score = 102 bits (255), Expect = 1e-20
Identities = 60/126 (47%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P S T H SP Y SP+ + + + SP+ +SPTS P YSP+SP
Sbjct: 1760 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPH-----YSPTS-PQYSPTSP 1813
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY---SPSSPGYSPTSPAYSPTSPS 394
Y+P+SP YSPTS YSPTSP Y+PTSP YSP+SP Y + SPGYSP+SP Y P + +
Sbjct: 1814 NYNPASPNYSPTSH-YSPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSPSSPQYDPIAVA 1872
Query: 395 YSPTSP 412
P SP
Sbjct: 1873 SVPRSP 1878
Score = 77.4 bits (189), Expect = 5e-13
Identities = 54/135 (40%), Positives = 67/135 (49%), Gaps = 20/135 (14%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P S T H SP Y SP+ S + + SP +SPTS P Y+P+SP
Sbjct: 1767 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQ-----YSPTS-PNYNPASP 1820
Query: 224 GYSPSS------PGYSPTSPGYSPTSP----------GYSPTSPGYSPTSPTYSPSSPGY 355
YSP+S P Y+PTSP YSP+SP GYSP+SP Y P + P SP Y
Sbjct: 1821 NYSPTSHYSPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSPSSPQYDPIAVASVPRSPSY 1880
Query: 356 S---PTSPAYSPTSP 391
S YSP+SP
Sbjct: 1881 SVGKMVDAEYSPSSP 1895
Score = 70.9 bits (172), Expect = 4e-11
Identities = 62/181 (34%), Positives = 69/181 (38%), Gaps = 66/181 (36%)
Frame = +2
Query: 68 SGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPG 247
SG + SP LSP L + + SP + G FSP +P SP
Sbjct: 1555 SGAFESDSFESPMSPLSPMSPLYQSYEPM-SPMISGQ-FSPVQM----------TPRSP- 1601
Query: 248 YSPTSPG-------------------YSPTSPGY-------------------------- 292
SP SPG Y+PTSP Y
Sbjct: 1602 MSPVSPGGIFSPVPYSPMSPSSPLMDYTPTSPIYAASSPTYNTEVSERARKKYKVNNTLS 1661
Query: 293 ---------------------SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
SPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTS
Sbjct: 1662 SYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1721
Query: 410 P 412
P
Sbjct: 1722 P 1722
[133][TOP]
>UniRef100_Q5CH45 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium hominis
RepID=Q5CH45_CRYHO
Length = 1895
Score = 134 bits (337), Expect = 3e-30
Identities = 72/117 (61%), Positives = 82/117 (70%), Gaps = 1/117 (0%)
Frame = +2
Query: 65 ISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSS 241
+S T H SP Y SP+ + + + SP+ +SPTS P YSP+SP YSP+S
Sbjct: 1675 LSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPH-----YSPTS-PHYSPTSPHYSPTS 1728
Query: 242 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1729 PHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1785
Score = 133 bits (334), Expect = 7e-30
Identities = 72/123 (58%), Positives = 83/123 (67%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P S T H SP Y SP+ + + + SP+ +SPTS P YSP+SP
Sbjct: 1697 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPH-----YSPTS-PHYSPTSP 1750
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSPSSP YSPTSP YSPTSP+Y+P
Sbjct: 1751 HYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNP 1810
Query: 404 TSP 412
SP
Sbjct: 1811 ASP 1813
Score = 132 bits (333), Expect = 9e-30
Identities = 67/100 (67%), Positives = 77/100 (77%)
Frame = +2
Query: 113 LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGY 292
+SP+L + + + SP+ +SPTS P YSP+SP YSP+SP YSPTSP YSPTSP Y
Sbjct: 1671 ISPDLSPTSPHYSPTSPH-----YSPTS-PHYSPTSPHYSPTSPHYSPTSPHYSPTSPHY 1724
Query: 293 SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1725 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSP 1764
Score = 127 bits (319), Expect = 4e-28
Identities = 69/122 (56%), Positives = 82/122 (67%), Gaps = 1/122 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P S T H SP Y SP+ + + + SP+ +SPTS P YSP+SP
Sbjct: 1704 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPH-----YSPTS-PHYSPTSP 1757
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP+SP YSPTSP YSPTSP YSPTSP YSP+SP YSP+SP YSPTSP Y+P SP+YSP
Sbjct: 1758 HYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQYSPTSPNYNPASPNYSP 1817
Query: 404 TS 409
TS
Sbjct: 1818 TS 1819
Score = 107 bits (268), Expect = 3e-22
Identities = 70/144 (48%), Positives = 77/144 (53%), Gaps = 26/144 (18%)
Frame = +2
Query: 59 SPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP----- 223
SP+ TP SP +SP SP + SP M ++PTS P Y+ SSP
Sbjct: 1585 SPVQMTP-----RSPMSPVSPGGIFSPVPYSPMSPSSPLMDYTPTS-PIYAASSPTYNTE 1638
Query: 224 ----------------GYSPSSP-----GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 340
YSPSSP S SP SPTSP YSPTSP YSPTSP YSP
Sbjct: 1639 VSERARKKYKVNNTLSSYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSP 1698
Query: 341 SSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1699 TSPHYSPTSPHYSPTSPHYSPTSP 1722
Score = 102 bits (255), Expect = 1e-20
Identities = 60/126 (47%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P S T H SP Y SP+ + + + SP+ +SPTS P YSP+SP
Sbjct: 1753 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPH-----YSPTS-PQYSPTSP 1806
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY---SPSSPGYSPTSPAYSPTSPS 394
Y+P+SP YSPTS YSPTSP Y+PTSP YSP+SP Y + SPGYSP+SP Y P + +
Sbjct: 1807 NYNPASPNYSPTSH-YSPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSPSSPQYDPIAVT 1865
Query: 395 YSPTSP 412
P SP
Sbjct: 1866 SVPRSP 1871
Score = 79.3 bits (194), Expect = 1e-13
Identities = 55/135 (40%), Positives = 68/135 (50%), Gaps = 20/135 (14%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P S T H SP Y SP+ S + + SP +SPTS P Y+P+SP
Sbjct: 1760 SPTSPHYSPTSPHYSPTSPHYSPTSPHYSPSSPHYSPTSPQ-----YSPTS-PNYNPASP 1813
Query: 224 GYSPSS------PGYSPTSPGYSPTSP----------GYSPTSPGYSPTSPTYSPSSPGY 355
YSP+S P Y+PTSP YSP+SP GYSP+SP Y P + T P SP Y
Sbjct: 1814 NYSPTSHYSPTSPNYNPTSPNYSPSSPNYISNNSGSPGYSPSSPQYDPIAVTSVPRSPSY 1873
Query: 356 S---PTSPAYSPTSP 391
S YSP+SP
Sbjct: 1874 SVGKMVDAEYSPSSP 1888
Score = 70.9 bits (172), Expect = 4e-11
Identities = 62/181 (34%), Positives = 69/181 (38%), Gaps = 66/181 (36%)
Frame = +2
Query: 68 SGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPG 247
SG + SP LSP L + + SP + G FSP +P SP
Sbjct: 1548 SGAFESDSFESPMSPLSPMSPLYQSYEPM-SPMISGQ-FSPVQM----------TPRSP- 1594
Query: 248 YSPTSPG-------------------YSPTSPGY-------------------------- 292
SP SPG Y+PTSP Y
Sbjct: 1595 MSPVSPGGIFSPVPYSPMSPSSPLMDYTPTSPIYAASSPTYNTEVSERARKKYKVNNTLS 1654
Query: 293 ---------------------SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
SPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTS
Sbjct: 1655 SYSPSSPLNSDNKISNISPDLSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTSPHYSPTS 1714
Query: 410 P 412
P
Sbjct: 1715 P 1715
[134][TOP]
>UniRef100_A8Q5I6 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
RepID=A8Q5I6_MALGO
Length = 1607
Score = 134 bits (337), Expect = 3e-30
Identities = 73/109 (66%), Positives = 80/109 (73%), Gaps = 1/109 (0%)
Frame = +2
Query: 89 GMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSP 265
G P Y SP + SPT+ Q+SP +SPTS P YSP+SP YSP+SP YSPTSP
Sbjct: 1473 GASGPKYSPTSP--QYSPTSP-QYSPT--SPQYSPTS-PQYSPTSPQYSPTSPQYSPTSP 1526
Query: 266 GYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1527 QYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1575
Score = 133 bits (335), Expect = 5e-30
Identities = 77/129 (59%), Positives = 85/129 (65%), Gaps = 6/129 (4%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPY-----VGGMAFSPTSSPG 205
M+P S T SP+Y SP + SPT+ A P G +SPTS P
Sbjct: 1431 MSPASPNYSPTSPVYSPTSPAYSPTSP--QYSPTSPA--GPRGRRLGASGPKYSPTS-PQ 1485
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPT
Sbjct: 1486 YSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPT 1545
Query: 386 SPSYSPTSP 412
SP YSPTSP
Sbjct: 1546 SPQYSPTSP 1554
Score = 133 bits (335), Expect = 5e-30
Identities = 68/105 (64%), Positives = 76/105 (72%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SP+ P R + ++SP +SPTS P YSP+SP YSP+SP YSPTSP YSP
Sbjct: 1460 SPTSPAGPRGRRLGASGPKYSPT--SPQYSPTS-PQYSPTSPQYSPTSPQYSPTSPQYSP 1516
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 1517 TSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1561
Score = 129 bits (325), Expect = 8e-29
Identities = 77/132 (58%), Positives = 85/132 (64%), Gaps = 1/132 (0%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P Y G R SG Y SP Y SP + SPT+ Q+SP +SP
Sbjct: 1457 PQYSPTSPAGPRGRRLGASGPKYSP--TSPQYSPTSP--QYSPTSP-QYSPT--SPQYSP 1509
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP
Sbjct: 1510 TS-PQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSPQYSPTSP 1568
Query: 371 AYSPTSPSYSPT 406
YSPTSP YSP+
Sbjct: 1569 QYSPTSPQYSPS 1580
Score = 122 bits (305), Expect = 2e-26
Identities = 71/137 (51%), Positives = 80/137 (58%), Gaps = 15/137 (10%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQF--SPYVGGMAFSPTSSPGYSPSS 220
+P SP S + G SPSY SPT+ + SP + T + SP+S
Sbjct: 1385 SPAYSPTSPRIF-AGATSPSY--------SPTSPSYSPSSPVIDASNARSTYTSRMSPAS 1435
Query: 221 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPG-------------YSPTSPTYSPSSPGYSP 361
P YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSP
Sbjct: 1436 PNYSPTSPVYSPTSPAYSPTSPQYSPTSPAGPRGRRLGASGPKYSPTSPQYSPTSPQYSP 1495
Query: 362 TSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP
Sbjct: 1496 TSPQYSPTSPQYSPTSP 1512
Score = 83.2 bits (204), Expect = 8e-15
Identities = 63/153 (41%), Positives = 73/153 (47%), Gaps = 25/153 (16%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLR--LSPTNDAQFSPYV--GGM--AFSP 190
G+D R+P TPY G SPN+ A FSP V GG +
Sbjct: 1277 GMDSDDLGARTPGGMTPYDSG--------SPNIDDDFRVQQQASFSPLVQVGGDEGGYGE 1328
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP---TYSP------- 340
S G SP SPGY G++PTSPGY PTSP Y+ TSP SP
Sbjct: 1329 YLSAGQSPMRTPLGAQSPGY-----GFAPTSPGYVPTSPAYNATSPALGAMSPWVGAAGA 1383
Query: 341 SSPGYSP---------TSPAYSPTSPSYSPTSP 412
+SP YSP TSP+YSPTSPSYSP+SP
Sbjct: 1384 TSPAYSPTSPRIFAGATSPSYSPTSPSYSPSSP 1416
Score = 80.9 bits (198), Expect = 4e-14
Identities = 53/96 (55%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ Q+SP +SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 1511 SPQYSPTSP--QYSPTSP-QYSPT--SPQYSPTS-PQYSPTSPQYSPTSPQYSPTSPQYS 1564
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 382
PTSP YSPTSP YSP+ + G S S A SP
Sbjct: 1565 PTSPQYSPTSPQYSPS------GNVGASAASGAASP 1594
[135][TOP]
>UniRef100_Q58EF0 Polr2a protein (Fragment) n=2 Tax=Danio rerio RepID=Q58EF0_DANRE
Length = 161
Score = 133 bits (335), Expect = 5e-30
Identities = 70/106 (66%), Positives = 82/106 (77%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + +PT+ + +SP ++PTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 22 SPSYSPTSP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSPKYSPTSPKYSPTSPTYS 75
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PT+P YSPTSP YSPTSPTY+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 76 PTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSPKYSPTSP 121
Score = 132 bits (333), Expect = 9e-30
Identities = 65/96 (67%), Positives = 76/96 (79%), Gaps = 3/96 (3%)
Frame = +2
Query: 134 SPT---NDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTS 304
SPT + +SP ++SPTS P Y+P+SP YSPSSP Y+PTSP YSPTSP YSPTS
Sbjct: 8 SPTYTPSSPSYSP--SSPSYSPTS-PKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTS 64
Query: 305 PGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSPTYSP++P YSPTSP YSPTSP+Y+PTSP
Sbjct: 65 PKYSPTSPTYSPTTPKYSPTSPTYSPTSPTYTPTSP 100
Score = 132 bits (333), Expect = 9e-30
Identities = 69/105 (65%), Positives = 83/105 (79%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + SPT+ +++P ++SP SSP Y+P+SP YSP+SP YSPTSP YSP
Sbjct: 15 SPSYSPS-SPSYSPTSP-KYTPT--SPSYSP-SSPEYTPTSPKYSPTSPKYSPTSPKYSP 69
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 70 TSPTYSPTTPKYSPTSPTYSPTSPTYTPTSPKYSPTSPTYSPTSP 114
Score = 129 bits (324), Expect = 1e-28
Identities = 69/108 (63%), Positives = 79/108 (73%), Gaps = 3/108 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP+ ++SP +SPTS P YSP+SP YSP++P YSPTSP YSP
Sbjct: 36 SPSY--SPSSPEYTPTSPKYSPT--SPKYSPTS-PKYSPTSPTYSPTTPKYSPTSPTYSP 90
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP---SYSPTSP 412
TSP Y+PTSP YSPTSPTYSP+SP YSPTSP YSPTSP +YSPTSP
Sbjct: 91 TSPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSP 138
Score = 122 bits (307), Expect = 9e-27
Identities = 53/71 (74%), Positives = 60/71 (84%)
Frame = +2
Query: 200 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
P Y+P SP Y+PSSP YSP+SP YSPTSP Y+PTSP YSP+SP Y+P+SP YSPTSP YS
Sbjct: 2 PRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 61
Query: 380 PTSPSYSPTSP 412
PTSP YSPTSP
Sbjct: 62 PTSPKYSPTSP 72
Score = 122 bits (307), Expect = 9e-27
Identities = 68/106 (64%), Positives = 79/106 (74%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 50 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPTYTPTSPKYS 103
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YSP
Sbjct: 104 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSP 149
Score = 115 bits (288), Expect = 2e-24
Identities = 57/83 (68%), Positives = 65/83 (78%), Gaps = 3/83 (3%)
Frame = +2
Query: 173 GMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYS---PTSPTYSPS 343
G ++P SP Y+PSSP YSPSSP YSPTSP Y+PTSP YSP+SP PTSP YSP+
Sbjct: 1 GPRYTP-QSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSP---EYTPTSPKYSPT 56
Query: 344 SPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP+YSPT+P
Sbjct: 57 SPKYSPTSPKYSPTSPTYSPTTP 79
Score = 77.4 bits (189), Expect = 5e-13
Identities = 49/89 (55%), Positives = 58/89 (65%), Gaps = 7/89 (7%)
Frame = +2
Query: 98 SPSYMLSPNL-RLSPTNDAQFSPYVGGMAFSPTS------SPGYSPSSPGYSPSSPGYSP 256
SP+Y SP + SPT+ +SP ++PTS SP YSP+SP YSP+SP YSP
Sbjct: 71 SPTY--SPTTPKYSPTSPT-YSPT--SPTYTPTSPKYSPTSPTYSPTSPKYSPTSPTYSP 125
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPS 343
TSP S YSPTSPGYSPTSPTYSP+
Sbjct: 126 TSPKGST----YSPTSPGYSPTSPTYSPA 150
[136][TOP]
>UniRef100_O77165 DNA-directed RNA polymerase (Fragment) n=1 Tax=Breviata anathema
RepID=O77165_9EUKA
Length = 1690
Score = 133 bits (334), Expect = 7e-30
Identities = 69/121 (57%), Positives = 80/121 (66%), Gaps = 1/121 (0%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSYMLSP-NLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGY 229
G P+ G+P G S SP + SP + A +SP A+SP +SP YSP+SP Y
Sbjct: 1493 GYIPVPGSPAAAGYSPASPAYSPASPAYSPASPA-YSP--ASPAYSP-ASPAYSPASPAY 1548
Query: 230 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
SP+SP YSP SP YSP SP YSP SP YSP SP YSP+SP YSP SPAYSP SP+YSP S
Sbjct: 1549 SPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPAS 1608
Query: 410 P 412
P
Sbjct: 1609 P 1609
Score = 130 bits (328), Expect = 3e-29
Identities = 71/133 (53%), Positives = 83/133 (62%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
PS G+ GM G P+ +P G + P SP + A +SP A+SP
Sbjct: 1468 PSGGFGMGMGMGMGDIPVPSSPGPFGYI-PVPGSPAAAGYSPASPA-YSP--ASPAYSP- 1522
Query: 194 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
+SP YSP+SP YSP+SP YSP SP YSP SP YSP SP YSP SP YSP+SP YSP SPA
Sbjct: 1523 ASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPA 1582
Query: 374 YSPTSPSYSPTSP 412
YSP SP+YSP SP
Sbjct: 1583 YSPASPAYSPASP 1595
Score = 128 bits (321), Expect = 2e-28
Identities = 72/152 (47%), Positives = 84/152 (55%), Gaps = 32/152 (21%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPS---------YMLSPNLRLSPTNDAQ----------------- 154
G SP TPY M+SP M SP++ +SP+
Sbjct: 1432 GSSP-QHTPYSSHMLSPQAQAIDNTYGLMFSPSVTMSPSGGFGMGMGMGMGDIPVPSSPG 1490
Query: 155 ---FSPYVGGMA---FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYS 316
+ P G A +SP +SP YSP+SP YSP+SP YSP SP YSP SP YSP SP YS
Sbjct: 1491 PFGYIPVPGSPAAAGYSP-ASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYS 1549
Query: 317 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSP+SP YSP SPAYSP SP+YSP SP
Sbjct: 1550 PASPAYSPASPAYSPASPAYSPASPAYSPASP 1581
Score = 127 bits (319), Expect = 4e-28
Identities = 66/106 (62%), Positives = 75/106 (70%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SP + A +SP A+SP +SP YSP+SP YSP+SP YSP SP YS
Sbjct: 1531 SPAYSPASP--AYSPASPA-YSP--ASPAYSP-ASPAYSPASPAYSPASPAYSPASPAYS 1584
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSP SP YSP SP YSP+SP YSP SPAYSP SP+YSP SP
Sbjct: 1585 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASP 1630
Score = 127 bits (319), Expect = 4e-28
Identities = 66/106 (62%), Positives = 75/106 (70%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SP + A +SP A+SP +SP YSP+SP YSP+SP YSP SP YS
Sbjct: 1538 SPAYSPASP--AYSPASPA-YSP--ASPAYSP-ASPAYSPASPAYSPASPAYSPASPAYS 1591
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSP SP YSP SP YSP+SP YSP SPAYSP SP+YSP SP
Sbjct: 1592 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASP 1637
Score = 127 bits (319), Expect = 4e-28
Identities = 66/106 (62%), Positives = 75/106 (70%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SP + A +SP A+SP +SP YSP+SP YSP+SP YSP SP YS
Sbjct: 1545 SPAYSPASP--AYSPASPA-YSP--ASPAYSP-ASPAYSPASPAYSPASPAYSPASPAYS 1598
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSP SP YSP SP YSP+SP YSP SPAYSP SP+YSP SP
Sbjct: 1599 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASP 1644
Score = 127 bits (319), Expect = 4e-28
Identities = 66/106 (62%), Positives = 75/106 (70%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SP + A +SP A+SP +SP YSP+SP YSP+SP YSP SP YS
Sbjct: 1552 SPAYSPASP--AYSPASPA-YSP--ASPAYSP-ASPAYSPASPAYSPASPAYSPASPAYS 1605
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSP SP YSP SP YSP+SP YSP SPAYSP SP+YSP SP
Sbjct: 1606 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASP 1651
Score = 125 bits (315), Expect = 1e-27
Identities = 65/106 (61%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SP + A +SP A+SP +SP YSP+SP YSP+SP YSP SP YS
Sbjct: 1559 SPAYSPASP--AYSPASPA-YSP--ASPAYSP-ASPAYSPASPAYSPASPAYSPASPAYS 1612
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSP SP YSP SP YSP+SP YSP SPAYSP SP+Y P SP
Sbjct: 1613 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASP 1658
Score = 125 bits (315), Expect = 1e-27
Identities = 65/106 (61%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SP + A +SP A+SP +SP YSP+SP YSP+SP YSP SP YS
Sbjct: 1566 SPAYSPASP--AYSPASPA-YSP--ASPAYSP-ASPAYSPASPAYSPASPAYSPASPAYS 1619
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSP SP YSP SP YSP+SP YSP SPAY P SP+YSP SP
Sbjct: 1620 PASPAYSPASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASP 1665
Score = 125 bits (315), Expect = 1e-27
Identities = 65/106 (61%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SP + A +SP A+SP +SP YSP+SP YSP+SP YSP SP YS
Sbjct: 1573 SPAYSPASP--AYSPASPA-YSP--ASPAYSP-ASPAYSPASPAYSPASPAYSPASPAYS 1626
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSP SP YSP SP YSP+SP Y P SPAYSP SP+YSP SP
Sbjct: 1627 PASPAYSPASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPASP 1672
Score = 125 bits (315), Expect = 1e-27
Identities = 65/106 (61%), Positives = 74/106 (69%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SP + A +SP A+SP +SP YSP+SP YSP+SP YSP SP YS
Sbjct: 1580 SPAYSPASP--AYSPASPA-YSP--ASPAYSP-ASPAYSPASPAYSPASPAYSPASPAYS 1633
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSP SP YSP SP Y P+SP YSP SPAYSP SP+YSP SP
Sbjct: 1634 PASPAYSPASPAYSPASPAYGPASPAYSPASPAYSPASPAYSPASP 1679
Score = 122 bits (307), Expect = 9e-27
Identities = 63/106 (59%), Positives = 72/106 (67%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y SP SP + A +SP A+SP +SP YSP+SP YSP+SP YSP SP YS
Sbjct: 1587 SPAYSPASP--AYSPASPA-YSP--ASPAYSP-ASPAYSPASPAYSPASPAYSPASPAYS 1640
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSP SP Y P SP YSP+SP YSP SPAYSP SP+Y P P
Sbjct: 1641 PASPAYSPASPAYGPASPAYSPASPAYSPASPAYSPASPAYDPAEP 1686
[137][TOP]
>UniRef100_UPI00006A20E2 DNA-directed RNA polymerase II subunit RPB1 (EC 2.7.7.6) (RNA
polymerase II subunit B1) (DNA-directed RNA polymerase
II subunit A) (DNA-directed RNA polymerase III largest
subunit). n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A20E2
Length = 162
Score = 132 bits (332), Expect = 1e-29
Identities = 69/105 (65%), Positives = 83/105 (79%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + SPT+ +++P ++SP SSP Y+P+SP YSP+SP YSPTSP YSP
Sbjct: 14 SPSYSPS-SPSYSPTSP-KYTPT--SPSYSP-SSPEYTPTSPKYSPTSPKYSPTSPKYSP 68
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPT+P YSPTSPTYSP+SP Y+PTSP YSPTSP+YSPTSP
Sbjct: 69 TSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSP 113
Score = 131 bits (330), Expect = 2e-29
Identities = 69/106 (65%), Positives = 81/106 (76%), Gaps = 1/106 (0%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SPSY SP + +PT+ + +SP ++PTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 21 SPSYSPTSP--KYTPTSPS-YSP--SSPEYTPTS-PKYSPTSPKYSPTSPKYSPTSPTYS 74
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PT+P YSPTSP YSPTSP Y+P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 75 PTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTSPKYSPTSP 120
Score = 130 bits (328), Expect = 3e-29
Identities = 75/136 (55%), Positives = 84/136 (61%), Gaps = 1/136 (0%)
Frame = +2
Query: 8 QLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAF 184
Q PSY TP S + SP Y SP+ S SP +
Sbjct: 6 QSPSY--------TPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSP-----KY 52
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SPTS P YSP+SP YSP+SP YSPT+P YSPTSP YSPTSP Y+PTSP YSP+SP YSPT
Sbjct: 53 SPTS-PKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPT 111
Query: 365 SPAYSPTSPSYSPTSP 412
SP YSPTSP+YSPTSP
Sbjct: 112 SPKYSPTSPTYSPTSP 127
Score = 124 bits (312), Expect = 2e-27
Identities = 70/109 (64%), Positives = 81/109 (74%), Gaps = 4/109 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPT+ P YSP+SP YSP+SP Y+PTSP YS
Sbjct: 49 SPKYSPTSP--KYSPTSP-KYSPT--SPTYSPTT-PKYSPTSPTYSPTSPVYTPTSPKYS 102
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSP---GYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSPTYSP+SP YSPTSP YSPTSP+YS TSP
Sbjct: 103 PTSPTYSPTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSP 151
Score = 123 bits (309), Expect = 6e-27
Identities = 53/71 (74%), Positives = 60/71 (84%)
Frame = +2
Query: 200 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
P Y+P SP Y+PSSP YSP+SP YSPTSP Y+PTSP YSP+SP Y+P+SP YSPTSP YS
Sbjct: 1 PRYTPQSPSYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYS 60
Query: 380 PTSPSYSPTSP 412
PTSP YSPTSP
Sbjct: 61 PTSPKYSPTSP 71
Score = 119 bits (297), Expect = 1e-25
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ +SP +SPTS P YSP+SP Y+P+SP YSPTSP YS
Sbjct: 56 SPKYSPTSP--KYSPTSPT-YSPTTP--KYSPTS-PTYSPTSPVYTPTSPKYSPTSPTYS 109
Query: 275 PTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYSPTSPSYSP 403
PTSP YSPTSP YSPTSP TYSP+SPGYSPTSP YS TSP+ SP
Sbjct: 110 PTSPKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISP 155
[138][TOP]
>UniRef100_Q1E2G9 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
RepID=Q1E2G9_COCIM
Length = 1750
Score = 132 bits (332), Expect = 1e-29
Identities = 76/140 (54%), Positives = 89/140 (63%), Gaps = 18/140 (12%)
Frame = +2
Query: 47 TPGRSPISG-TPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY--- 208
+PG SP SG +P GM SP YM SP + A SP A+SPTS PGY
Sbjct: 1578 SPGYSPSSGYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSP-----AYSPTS-PGYGQA 1631
Query: 209 -SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY---------- 355
SP+SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP+SP
Sbjct: 1632 QSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSP 1691
Query: 356 -SPTSPAYSPTSPSYSPTSP 412
SPTSP Y+PTSP +SPTSP
Sbjct: 1692 TSPTSPKYTPTSPGWSPTSP 1711
Score = 129 bits (325), Expect = 8e-29
Identities = 74/135 (54%), Positives = 91/135 (67%), Gaps = 15/135 (11%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQF--SP-YVGGMAFSPTSSPGYSPSSP 223
G SP S P++ SP Y SP+ SPT+ SP Y+ FSP +SP ++P+SP
Sbjct: 1565 GYSPTS--PFNTSPTSPGY--SPSSGYSPTSPGMSITSPRYMTSPGFSP-ASPTFAPTSP 1619
Query: 224 GYSPSSPGY----SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
YSP+SPGY SPTSP YSPTSPG+SPTSP YSPTSP++SP+SP +SPTSP+YSPTSP
Sbjct: 1620 AYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSP 1679
Query: 392 S--------YSPTSP 412
+ SPTSP
Sbjct: 1680 ALGGATGRHLSPTSP 1694
Score = 103 bits (256), Expect = 8e-21
Identities = 70/136 (51%), Positives = 85/136 (62%), Gaps = 14/136 (10%)
Frame = +2
Query: 47 TPGRSPIS-GTPYHEGMMSPSYM-LSPNLR-----LSPTNDAQFSPYVGGMAFSPTSSPG 205
+P SP S G + SPSY SP SPT+ + FSP AFSPTS P
Sbjct: 1618 SPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS-FSP--ASPAFSPTS-PS 1673
Query: 206 YSPSSPGYSPSSPGY----SPTSPGYSPTSPGYSPTSP-GYSPTSPTY--SPSSPGYSPT 364
YSP+SP ++ + SPTSP Y+PTSPG+SPTSP YSPTSP + SP+SPG PT
Sbjct: 1674 YSPTSPALGGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFAGSPTSPG-GPT 1732
Query: 365 SPAYSPTSPSYSPTSP 412
SP YSPTSP+++PTSP
Sbjct: 1733 SPGYSPTSPTFNPTSP 1748
Score = 74.7 bits (182), Expect = 3e-12
Identities = 54/136 (39%), Positives = 67/136 (49%), Gaps = 21/136 (15%)
Frame = +2
Query: 68 SGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPG 247
SG+P E M Y+ SP+ D+QFSP + +P Y P PG+ SP
Sbjct: 1511 SGSPMQENM----YISSPD------PDSQFSPIGQTGSETPAGFTEYQP--PGFGGFSPA 1558
Query: 248 YSPTSPGYSPTSP-GYSPTSPGYSPTSPTYSPSSPGYSPT-------------------- 364
+ + GYSPTSP SPTSPGYSP+S GYSPT
Sbjct: 1559 GARSPGGYSPTSPFNTSPTSPGYSPSS--------GYSPTSPGMSITSPRYMTSPGFSPA 1610
Query: 365 SPAYSPTSPSYSPTSP 412
SP ++PTSP+YSPTSP
Sbjct: 1611 SPTFAPTSPAYSPTSP 1626
[139][TOP]
>UniRef100_C5PAJ4 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735 delta
SOWgp RepID=C5PAJ4_COCP7
Length = 1746
Score = 132 bits (332), Expect = 1e-29
Identities = 76/140 (54%), Positives = 89/140 (63%), Gaps = 18/140 (12%)
Frame = +2
Query: 47 TPGRSPISG-TPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY--- 208
+PG SP SG +P GM SP YM SP + A SP A+SPTS PGY
Sbjct: 1578 SPGYSPSSGYSPTSPGMSITSPRYMTSPGFSPASPTFAPTSP-----AYSPTS-PGYGQA 1631
Query: 209 -SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY---------- 355
SP+SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP+SP
Sbjct: 1632 QSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGATGRHLSP 1691
Query: 356 -SPTSPAYSPTSPSYSPTSP 412
SPTSP Y+PTSP +SPTSP
Sbjct: 1692 TSPTSPKYTPTSPGWSPTSP 1711
Score = 129 bits (325), Expect = 8e-29
Identities = 74/135 (54%), Positives = 91/135 (67%), Gaps = 15/135 (11%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQF--SP-YVGGMAFSPTSSPGYSPSSP 223
G SP S P++ SP Y SP+ SPT+ SP Y+ FSP +SP ++P+SP
Sbjct: 1565 GYSPTS--PFNTSPTSPGY--SPSSGYSPTSPGMSITSPRYMTSPGFSP-ASPTFAPTSP 1619
Query: 224 GYSPSSPGY----SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
YSP+SPGY SPTSP YSPTSPG+SPTSP YSPTSP++SP+SP +SPTSP+YSPTSP
Sbjct: 1620 AYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSP 1679
Query: 392 S--------YSPTSP 412
+ SPTSP
Sbjct: 1680 ALGGATGRHLSPTSP 1694
Score = 99.0 bits (245), Expect = 1e-19
Identities = 68/134 (50%), Positives = 83/134 (61%), Gaps = 14/134 (10%)
Frame = +2
Query: 47 TPGRSPIS-GTPYHEGMMSPSYM-LSPNLR-----LSPTNDAQFSPYVGGMAFSPTSSPG 205
+P SP S G + SPSY SP SPT+ + FSP AFSPTS P
Sbjct: 1618 SPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS-FSP--ASPAFSPTS-PS 1673
Query: 206 YSPSSPGYSPSSPGY----SPTSPGYSPTSPGYSPTSP-GYSPTSPTY--SPSSPGYSPT 364
YSP+SP ++ + SPTSP Y+PTSPG+SPTSP YSPTSP + SP+SPG PT
Sbjct: 1674 YSPTSPALGGATGRHLSPTSPTSPKYTPTSPGWSPTSPEAYSPTSPNFAGSPTSPG-GPT 1732
Query: 365 SPAYSPTSPSYSPT 406
SP YSPTSP+++PT
Sbjct: 1733 SPGYSPTSPTFNPT 1746
Score = 74.7 bits (182), Expect = 3e-12
Identities = 54/136 (39%), Positives = 67/136 (49%), Gaps = 21/136 (15%)
Frame = +2
Query: 68 SGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPG 247
SG+P E M Y+ SP+ D+QFSP + +P Y P PG+ SP
Sbjct: 1511 SGSPMQENM----YISSPD------PDSQFSPIGQTGSETPAGFTEYQP--PGFGGFSPA 1558
Query: 248 YSPTSPGYSPTSP-GYSPTSPGYSPTSPTYSPSSPGYSPT-------------------- 364
+ + GYSPTSP SPTSPGYSP+S GYSPT
Sbjct: 1559 GARSPGGYSPTSPFNTSPTSPGYSPSS--------GYSPTSPGMSITSPRYMTSPGFSPA 1610
Query: 365 SPAYSPTSPSYSPTSP 412
SP ++PTSP+YSPTSP
Sbjct: 1611 SPTFAPTSPAYSPTSP 1626
[140][TOP]
>UniRef100_C6F0A2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0A2_PLAFA
Length = 223
Score = 131 bits (330), Expect = 2e-29
Identities = 62/77 (80%), Positives = 66/77 (85%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
+SPTS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSP
Sbjct: 47 YSPTS-PKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSP 105
Query: 362 TSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP
Sbjct: 106 TSPKYSPTSPKYSPTSP 122
Score = 129 bits (324), Expect = 1e-28
Identities = 59/73 (80%), Positives = 63/73 (86%)
Frame = +2
Query: 194 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
+SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP
Sbjct: 43 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPK 102
Query: 374 YSPTSPSYSPTSP 412
YSPTSP YSPTSP
Sbjct: 103 YSPTSPKYSPTSP 115
Score = 127 bits (320), Expect = 3e-28
Identities = 65/105 (61%), Positives = 74/105 (70%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SP+Y + N SPT+ + + + SP YS +SP YSP+SP YSPTSP YSP
Sbjct: 5 SPTYNAN-NAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSP 63
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 64 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 108
Score = 118 bits (296), Expect = 2e-25
Identities = 68/125 (54%), Positives = 83/125 (66%), Gaps = 18/125 (14%)
Frame = +2
Query: 92 MMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY 271
+MSP Y ++ + + SPT+ ++SP +SPTS P YSP+SP YSP+SP YSPTSP Y
Sbjct: 35 VMSPVYSVT-SPKYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPTSPKY 89
Query: 272 SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA------------------YSPTSPSY 397
SPTSP YSPTSP YSPTSP YSP+SP YSPTSP +SPTSP+Y
Sbjct: 90 SPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAY 149
Query: 398 SPTSP 412
S +SP
Sbjct: 150 SISSP 154
Score = 108 bits (271), Expect = 1e-22
Identities = 58/102 (56%), Positives = 64/102 (62%), Gaps = 25/102 (24%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSP-------------------------SSPGYSPTSPGYSPTSP 286
+SPTS P Y+ ++ YSP +SP YSPTSP YSPTSP
Sbjct: 1 YSPTS-PTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSP 59
Query: 287 GYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 60 KYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 101
Score = 78.2 bits (191), Expect = 3e-13
Identities = 55/119 (46%), Positives = 65/119 (54%), Gaps = 21/119 (17%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 65 SPKYSPTSP--KYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPTSPKYS 118
Query: 275 PTSP------------------GYSPTSPGYSPTSPTYSPSS--PGYSPTSPAYSPTSP 391
PTSP +SPTSP YS +SP Y S + P SPAY SP
Sbjct: 119 PTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSPVYDKSGVVNAHQPMSPAYILQSP 177
[141][TOP]
>UniRef100_C5FCL2 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FCL2_NANOT
Length = 1748
Score = 131 bits (330), Expect = 2e-29
Identities = 74/145 (51%), Positives = 90/145 (62%), Gaps = 23/145 (15%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQF--SP-YVGGMAFSPTS------S 199
+PG +P++ SP+Y SP+ SPT+ SP ++ AFSP S S
Sbjct: 1560 SPGGGYSPSSPFNTSPTSPAY--SPSSGYSPTSPGMSITSPRFISSPAFSPASPSFAPTS 1617
Query: 200 PGYSPSSPGY----SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTS 367
P YSP+SPGY SP+SP YSPTSPG+SPTSP YSPTSP +SP SP +SP+SP YSPTS
Sbjct: 1618 PAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPVFSPTSPSYSPTS 1677
Query: 368 PAY----------SPTSPSYSPTSP 412
PA SPTSP Y+PTSP
Sbjct: 1678 PALGGTGRHLSPTSPTSPKYTPTSP 1702
Score = 122 bits (306), Expect = 1e-26
Identities = 73/142 (51%), Positives = 88/142 (61%), Gaps = 20/142 (14%)
Frame = +2
Query: 47 TPGRSPISG-TPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVG------GMAFSPTSS 199
+P SP SG +P GM SP ++ SP + + A SP G A SPTS
Sbjct: 1577 SPAYSPSSGYSPTSPGMSITSPRFISSPAFSPASPSFAPTSPAYSPTSPGYGQAQSPTS- 1635
Query: 200 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY----------SPSSP 349
P YSP+SPG+SP+SP YSPTSP +SP SP +SPTSP YSPTSP SP+SP
Sbjct: 1636 PSYSPTSPGFSPTSPSYSPTSPSFSPASPVFSPTSPSYSPTSPALGGTGRHLSPTSPTSP 1695
Query: 350 GYSPTSPAYSPTSP-SYSPTSP 412
Y+PTSP +SPTSP +YSPTSP
Sbjct: 1696 KYTPTSPGWSPTSPEAYSPTSP 1717
Score = 117 bits (292), Expect = 5e-25
Identities = 72/157 (45%), Positives = 86/157 (54%), Gaps = 42/157 (26%)
Frame = +2
Query: 68 SGTPYHEGMM----SPSYMLSPNLRLSPTNDAQFSPY----VGGMA----------FSPT 193
SG+P E M P SP + N F+ Y GG + +SP+
Sbjct: 1509 SGSPMQENMYISSPDPDSQFSPVRQAGSENAVGFADYQPPSYGGFSPHEPRSPGGGYSPS 1568
Query: 194 SSPGYSPSSPGYSPSSPGYSPTSPG--------------------YSPTSPGYSPTSPGY 313
S SP+SP YSPSS GYSPTSPG ++PTSP YSPTSPGY
Sbjct: 1569 SPFNTSPTSPAYSPSS-GYSPTSPGMSITSPRFISSPAFSPASPSFAPTSPAYSPTSPGY 1627
Query: 314 ----SPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSP+YSP+SPG+SPTSP+YSPTSPS+SP SP
Sbjct: 1628 GQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASP 1664
Score = 87.0 bits (214), Expect = 6e-16
Identities = 56/109 (51%), Positives = 71/109 (65%), Gaps = 8/109 (7%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMA--FSPTS--SPGYS 211
+PG SP S + SPS+ SP + + + SP +GG SPTS SP Y+
Sbjct: 1642 SPGFSPTSPS---YSPTSPSFSPASPVFSPTSPSYSPTSPALGGTGRHLSPTSPTSPKYT 1698
Query: 212 PSSPGYSPSSP-GYSPTSPGYS--PTSPGYSPTSPGYSPTSPTYSPSSP 349
P+SPG+SP+SP YSPTSP +S PTSPG PTSPGYSPTSPT++P+SP
Sbjct: 1699 PTSPGWSPTSPEAYSPTSPNFSGSPTSPG-GPTSPGYSPTSPTFNPTSP 1746
[142][TOP]
>UniRef100_C4JY44 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
RepID=C4JY44_UNCRE
Length = 1747
Score = 131 bits (329), Expect = 3e-29
Identities = 74/140 (52%), Positives = 89/140 (63%), Gaps = 18/140 (12%)
Frame = +2
Query: 47 TPGRSPISG---TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY--- 208
+PG SP SG T G+ SP +M SP + + A SP A+SPTS PGY
Sbjct: 1530 SPGYSPSSGYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSP-----AYSPTS-PGYGQA 1583
Query: 209 -SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY---------- 355
SP+SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP+SP
Sbjct: 1584 QSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPTSPSYSPTSPALGGVTGRHLSP 1643
Query: 356 -SPTSPAYSPTSPSYSPTSP 412
SPTSP Y+PTSP +SPTSP
Sbjct: 1644 TSPTSPKYTPTSPGWSPTSP 1663
Score = 129 bits (324), Expect = 1e-28
Identities = 74/144 (51%), Positives = 93/144 (64%), Gaps = 19/144 (13%)
Frame = +2
Query: 38 FGMTPGRSPISG----TPYHEGMMSPSYMLSPNLRLSPTNDAQ--FSP-YVGGMAFSPTS 196
F RSP G +P++ SP Y SP+ SPT+ SP ++ FSP +
Sbjct: 1506 FSPAGARSPGGGYSPTSPFNTSPTSPGY--SPSSGYSPTSPGMGITSPRFMTSPGFSP-A 1562
Query: 197 SPGYSPSSPGYSPSSPGY----SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SP ++P+SP YSP+SPGY SPTSP YSPTSPG+SPTSP YSPTSP++SP+SP +SPT
Sbjct: 1563 SPSFAPTSPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPSFSPASPAFSPT 1622
Query: 365 SPAYSPTSPS--------YSPTSP 412
SP+YSPTSP+ SPTSP
Sbjct: 1623 SPSYSPTSPALGGVTGRHLSPTSP 1646
Score = 104 bits (259), Expect = 3e-21
Identities = 66/138 (47%), Positives = 79/138 (57%), Gaps = 23/138 (16%)
Frame = +2
Query: 68 SGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS---SPG--YS 232
SG+P E M S P+ + SP G + P G+SP+ SPG YS
Sbjct: 1462 SGSPMQENMYISSP--DPDSQFSPIGQTGSETPAGFTEYQPPGFGGFSPAGARSPGGGYS 1519
Query: 233 PSSP-GYSPTSPGYSPTSPGYSP-------------TSPGYSPTSPTYSPSSPGYSPTSP 370
P+SP SPTSPGYSP+S GYSP TSPG+SP SP+++P+SP YSPTSP
Sbjct: 1520 PTSPFNTSPTSPGYSPSS-GYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTSP 1578
Query: 371 AY----SPTSPSYSPTSP 412
Y SPTSPSYSPTSP
Sbjct: 1579 GYGQAQSPTSPSYSPTSP 1596
Score = 96.3 bits (238), Expect = 1e-18
Identities = 66/133 (49%), Positives = 80/133 (60%), Gaps = 14/133 (10%)
Frame = +2
Query: 47 TPGRSPIS-GTPYHEGMMSPSYM-LSPNLR-----LSPTNDAQFSPYVGGMAFSPTSSPG 205
+P SP S G + SPSY SP SPT+ + FSP AFSPTS P
Sbjct: 1570 SPAYSPTSPGYGQAQSPTSPSYSPTSPGFSPTSPSYSPTSPS-FSP--ASPAFSPTS-PS 1625
Query: 206 YSPSSPGYSPSSPGY----SPTSPGYSPTSPGYSPTSP-GYSPTSPTY--SPSSPGYSPT 364
YSP+SP + + SPTSP Y+PTSPG+SPTSP YSPTSP + SP+SPG+S
Sbjct: 1626 YSPTSPALGGVTGRHLSPTSPTSPKYTPTSPGWSPTSPDAYSPTSPNFAGSPTSPGWSLL 1685
Query: 365 SPAYSPTSPSYSP 403
P YSPTSP+Y+P
Sbjct: 1686 PPGYSPTSPTYNP 1698
Score = 84.0 bits (206), Expect = 5e-15
Identities = 53/108 (49%), Positives = 69/108 (63%), Gaps = 9/108 (8%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMA---FSPTS--SPGY 208
+PG SP S + SPS+ SP + + + SP +GG+ SPTS SP Y
Sbjct: 1595 SPGFSPTSPS---YSPTSPSFSPASPAFSPTSPSYSPTSPALGGVTGRHLSPTSPTSPKY 1651
Query: 209 SPSSPGYSPSSP-GYSPTSPGY--SPTSPGYSPTSPGYSPTSPTYSPS 343
+P+SPG+SP+SP YSPTSP + SPTSPG+S PGYSPTSPTY+P+
Sbjct: 1652 TPTSPGWSPTSPDAYSPTSPNFAGSPTSPGWSLLPPGYSPTSPTYNPN 1699
[143][TOP]
>UniRef100_A1CNZ4 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
RepID=A1CNZ4_ASPCL
Length = 1765
Score = 131 bits (329), Expect = 3e-29
Identities = 73/136 (53%), Positives = 87/136 (63%), Gaps = 14/136 (10%)
Frame = +2
Query: 47 TPGRSPISG-TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG SP + +P G+ SP + SP SP FSP +F+PTS P YSP+SP
Sbjct: 1580 SPGYSPTTSYSPIAPGITSPRFNTSPGFMTSPG----FSPV--SPSFAPTS-PAYSPTSP 1632
Query: 224 GY---SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY------ 376
Y SP+SP YSPTSPG+SPTSP YSPTSP +SP SP +SP+SP YSPTSPA
Sbjct: 1633 AYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRH 1692
Query: 377 ----SPTSPSYSPTSP 412
SPTSP Y+PTSP
Sbjct: 1693 LSPTSPTSPKYTPTSP 1708
Score = 114 bits (285), Expect = 3e-24
Identities = 72/163 (44%), Positives = 85/163 (52%), Gaps = 37/163 (22%)
Frame = +2
Query: 35 DFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVG-GMAFSP--TSSPG 205
D G S GTP + SP +P ++ P G G FSP TS G
Sbjct: 1511 DTGSPMQESAYIGTPDPDSAFSPIGQAGAE---TPGGFTEYQPTGGFGGGFSPAATSPAG 1567
Query: 206 YSPSSP--------GYSP-----------------------SSPGYSPTSPGYSPTSPGY 292
YSP+SP GYSP +SPG+SP SP ++PTSP Y
Sbjct: 1568 YSPTSPFSANPTSPGYSPTTSYSPIAPGITSPRFNTSPGFMTSPGFSPVSPSFAPTSPAY 1627
Query: 293 SPTSPGY---SPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSP Y SPTSP+YSP+SPG+SPTSP YSPTSPS+SP SP
Sbjct: 1628 SPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASP 1670
Score = 114 bits (284), Expect = 4e-24
Identities = 73/154 (47%), Positives = 88/154 (57%), Gaps = 21/154 (13%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P + F +PG SP+S + SP+Y SP + +SP G FSP
Sbjct: 1599 PRFNTSPGFMTSPGFSPVSPS---FAPTSPAYSPTSPAYGQASPTSPSYSPTSPG--FSP 1653
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPG-----------------YSPTSPGYSP 319
TS P YSP+SP +SP+SP +SPTSP YSPTSP Y+PTSPG+SP
Sbjct: 1654 TS-PNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSP 1712
Query: 320 TSP-TYSPSSPGY--SPTSPAYSPTSPSYSPTSP 412
TSP TYSP+SP + SPTSP PTSP YSPTSP
Sbjct: 1713 TSPQTYSPTSPNFAGSPTSPG-GPTSPGYSPTSP 1745
Score = 84.7 bits (208), Expect = 3e-15
Identities = 58/116 (50%), Positives = 71/116 (61%), Gaps = 8/116 (6%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMA--FSPTS--SPGYS 211
+PG SP S + SPS+ SP + + + SP +GG SPTS SP Y+
Sbjct: 1648 SPGFSPTSP---NYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYT 1704
Query: 212 PSSPGYSPSSPG-YSPTSPGY--SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
P+SPG+SP+SP YSPTSP + SPTSPG PTSPGYSPTSP +SPS Y P P
Sbjct: 1705 PTSPGWSPTSPQTYSPTSPNFAGSPTSPG-GPTSPGYSPTSPAFSPS---YVPPPP 1756
[144][TOP]
>UniRef100_C1H3Q4 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1H3Q4_PARBA
Length = 1748
Score = 130 bits (327), Expect = 5e-29
Identities = 77/152 (50%), Positives = 97/152 (63%), Gaps = 17/152 (11%)
Frame = +2
Query: 8 QLPSYMDGLDFGMTPGRSPISG----TPYHEGMMSPSYMLSPNLRLSPTNDAQF--SP-Y 166
Q P + G F RSP G +P++ SP Y SP+ SPT+ SP +
Sbjct: 1550 QAPGFSGG--FSPHGARSPGGGYSPSSPFNTSPTSPRY--SPSSGYSPTSPGMSITSPRF 1605
Query: 167 VGGMAFSPTSSPGYSPSSPGYSPSSPGY--SPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 340
+ FSP +SP ++P+SP YSP+SPGY SPTSP YSPTSPG+SPTSP YSPTSP++SP
Sbjct: 1606 MSSPGFSP-ASPVFAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSPNYSPTSPSFSP 1664
Query: 341 SSPGYSPTSPAYSPTSPS--------YSPTSP 412
+SP +SPTSP+YSPTSP+ SPTSP
Sbjct: 1665 ASPAFSPTSPSYSPTSPALGGSTGRHLSPTSP 1696
Score = 127 bits (318), Expect = 5e-28
Identities = 74/138 (53%), Positives = 88/138 (63%), Gaps = 16/138 (11%)
Frame = +2
Query: 47 TPGRSPISG-TPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY--S 211
+P SP SG +P GM SP +M SP + A SP A+SPTS PGY S
Sbjct: 1582 SPRYSPSSGYSPTSPGMSITSPRFMSSPGFSPASPVFAPTSP-----AYSPTS-PGYQQS 1635
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY-----------S 358
P+SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP+SP S
Sbjct: 1636 PTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTS 1695
Query: 359 PTSPAYSPTSPSYSPTSP 412
PTSP Y+PTSP +SPTSP
Sbjct: 1696 PTSPKYTPTSPGWSPTSP 1713
Score = 116 bits (291), Expect = 7e-25
Identities = 74/151 (49%), Positives = 90/151 (59%), Gaps = 28/151 (18%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
F +PG SP S SP+Y SP + SPT+ + +SP G FSPTS P YSP
Sbjct: 1605 FMSSPGFSPASPV---FAPTSPAYSPTSPGYQQSPTSPS-YSPTSPG--FSPTS-PNYSP 1657
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPG------------------YSPTSPGYSPTSP-TYS 337
+SP +SP+SP +SPTSP YSPTSP Y+PTSPG+SPTSP TYS
Sbjct: 1658 TSPSFSPASPAFSPTSPSYSPTSPALGGSTGRHLSPTSPTSPKYTPTSPGWSPTSPETYS 1717
Query: 338 PSSPGYS--------PTSPAYSPTSPSYSPT 406
P+SP +S PTSP YSPTSP++SPT
Sbjct: 1718 PTSPNFSGSPTSPGGPTSPGYSPTSPTFSPT 1748
Score = 98.6 bits (244), Expect = 2e-19
Identities = 71/156 (45%), Positives = 82/156 (52%), Gaps = 30/156 (19%)
Frame = +2
Query: 35 DFGMTP--GRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
D TP SP+ Y G P SP + A F+ Y +P S G+
Sbjct: 1505 DGAATPYDSNSPLQDNMYI-GTPDPDSAFSPIRQAGSETPAGFTEYQ-----APGFSGGF 1558
Query: 209 SPS---SPG--YSPSSP-GYSPTSPGYSPTSPGYSPTSPG-------------------- 310
SP SPG YSPSSP SPTSP YSP+S GYSPTSPG
Sbjct: 1559 SPHGARSPGGGYSPSSPFNTSPTSPRYSPSS-GYSPTSPGMSITSPRFMSSPGFSPASPV 1617
Query: 311 YSPTSPTYSPSSPGY--SPTSPAYSPTSPSYSPTSP 412
++PTSP YSP+SPGY SPTSP+YSPTSP +SPTSP
Sbjct: 1618 FAPTSPAYSPTSPGYQQSPTSPSYSPTSPGFSPTSP 1653
[145][TOP]
>UniRef100_Q8MX30 DNA-directed RNA polymerase (Fragment) n=1 Tax=Naegleria gruberi
RepID=Q8MX30_NAEGR
Length = 1590
Score = 130 bits (326), Expect = 6e-29
Identities = 72/117 (61%), Positives = 77/117 (65%), Gaps = 8/117 (6%)
Frame = +2
Query: 74 TPYHEGMMSP---SYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG----YS 232
TPYH G SP M SP FSP AFSP +S SP+SPG YS
Sbjct: 1477 TPYHGGASSPWTQGAMTPLGRTPSPEYQGGFSPSPYNSAFSPVAS---SPTSPGHQGGYS 1533
Query: 233 PSSPG-YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 400
PSSPG YSPTSP YSP+SP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP+YS
Sbjct: 1534 PSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSPNYSPTSPAYS 1590
Score = 114 bits (284), Expect = 4e-24
Identities = 63/107 (58%), Positives = 73/107 (68%), Gaps = 2/107 (1%)
Frame = +2
Query: 44 MTP-GRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSP-YVGGMAFSPTSSPGYSPS 217
MTP GR+P +P ++G SPS N SP + SP + GG +SP+S YSP+
Sbjct: 1492 MTPLGRTP---SPEYQGGFSPSPY---NSAFSPVASSPTSPGHQGG--YSPSSPGNYSPT 1543
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 358
SP YSPSSP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YS
Sbjct: 1544 SPAYSPSSPNYSPTSPAYSPTSPNYSPTSPAYSPTSPNYSPTSPAYS 1590
Score = 107 bits (266), Expect = 5e-22
Identities = 63/123 (51%), Positives = 74/123 (60%), Gaps = 1/123 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
TP + TPYH G+ +P + + SP +P G SP G+SPS
Sbjct: 1460 TPYHTSGLATPYHGGVATPYHGGAS----SPWTQGAMTPL--GRTPSPEYQGGFSPSPYN 1513
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPG-YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
+ S SPTSPG+ GYSP+SPG YSPTSP YSPSSP YSPTSPAYSPTSP+YSP
Sbjct: 1514 SAFSPVASSPTSPGHQG---GYSPSSPGNYSPTSPAYSPSSPNYSPTSPAYSPTSPNYSP 1570
Query: 404 TSP 412
TSP
Sbjct: 1571 TSP 1573
[146][TOP]
>UniRef100_A7EKT1 DNA-directed RNA polymerase n=2 Tax=Sclerotinia sclerotiorum
RepID=A7EKT1_SCLS1
Length = 1746
Score = 128 bits (322), Expect = 2e-28
Identities = 82/158 (51%), Positives = 91/158 (57%), Gaps = 36/158 (22%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS-------SPG 205
+PG SP S P G SP Y +SP R SP + A F+P A+SPTS SP
Sbjct: 1584 SPGYSPTS--PMMGGGASPGYSVSP--RFSPVSPA-FTPT--SPAYSPTSPSFVSPTSPS 1636
Query: 206 YSPSSPGYSPSSPG---------YSPTSPGYSPTSPGYSPTSPGY-----------SPTS 325
YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP Y SPTS
Sbjct: 1637 YSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTS 1696
Query: 326 PTYSPSSPGYSP---------TSPAYSPTSPSYSPTSP 412
P YSP+SP +SP TSP YSPTSPSYSPTSP
Sbjct: 1697 PVYSPTSPNWSPSSPQHQGNNTSPKYSPTSPSYSPTSP 1734
Score = 99.0 bits (245), Expect = 1e-19
Identities = 63/140 (45%), Positives = 80/140 (57%), Gaps = 29/140 (20%)
Frame = +2
Query: 38 FGMTPGRSPISG--TPYHEGMM--SPSYMLSPNLRLSPT--NDAQFSPYVGGMAFSPT-- 193
+ ++P SP+S TP SPS++ + SPT N + SP + G SP+
Sbjct: 1602 YSVSPRFSPVSPAFTPTSPAYSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYS 1661
Query: 194 -SSPGYSPSSPGYSPSSPGY-----------SPTSPGYSPTSPGYSP---------TSPG 310
+SP YSP+SP YSP+SP Y SPTSP YSPTSP +SP TSP
Sbjct: 1662 PTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTSPNWSPSSPQHQGNNTSPK 1721
Query: 311 YSPTSPTYSPSSPGYSPTSP 370
YSPTSP+YSP+SP +SPTSP
Sbjct: 1722 YSPTSPSYSPTSPNFSPTSP 1741
Score = 90.9 bits (224), Expect = 4e-17
Identities = 63/142 (44%), Positives = 75/142 (52%), Gaps = 22/142 (15%)
Frame = +2
Query: 53 GRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSP-GYSP 214
G+SP++ GTP + SP S T + Y G + F SP G
Sbjct: 1504 GQSPLNEGGYLGTPDYGAAFSPIQSAG-----SETPSGFATEYGGSLGFGGGMSPYGAGS 1558
Query: 215 SSPGYSPSSPGYSPTSP-GYSPTSPGYSPTSPGYSPT--------------SPTYSPSSP 349
SPG GYSPTSP SPTSP +SP+SPGYSPT SP +SP SP
Sbjct: 1559 RSPG-----GGYSPTSPFNASPTSPQFSPSSPGYSPTSPMMGGGASPGYSVSPRFSPVSP 1613
Query: 350 GYSPTSPAYSPTSPSY-SPTSP 412
++PTSPAYSPTSPS+ SPTSP
Sbjct: 1614 AFTPTSPAYSPTSPSFVSPTSP 1635
Score = 56.2 bits (134), Expect = 1e-06
Identities = 34/90 (37%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +2
Query: 146 DAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTS 325
D Q GG +P +SP S + G++ G G SP G
Sbjct: 1503 DGQSPLNEGGYLGTPDYGAAFSPIQSAGSETPSGFATEYGGSLGFGGGMSPYGAGSRSPG 1562
Query: 326 PTYSPSSP-GYSPTSPAYSPTSPSYSPTSP 412
YSP+SP SPTSP +SP+SP YSPTSP
Sbjct: 1563 GGYSPTSPFNASPTSPQFSPSSPGYSPTSP 1592
[147][TOP]
>UniRef100_A6SI63 DNA-directed RNA polymerase n=1 Tax=Botryotinia fuckeliana B05.10
RepID=A6SI63_BOTFB
Length = 1742
Score = 128 bits (322), Expect = 2e-28
Identities = 82/158 (51%), Positives = 91/158 (57%), Gaps = 36/158 (22%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS-------SPG 205
+PG SP S P G SP Y +SP R SP + A F+P A+SPTS SP
Sbjct: 1580 SPGYSPTS--PMMGGGASPGYAVSP--RFSPVSPA-FTPT--SPAYSPTSPSFVSPTSPS 1632
Query: 206 YSPSSPGYSPSSPG---------YSPTSPGYSPTSPGYSPTSPGY-----------SPTS 325
YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP Y SPTS
Sbjct: 1633 YSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTS 1692
Query: 326 PTYSPSSPGYSP---------TSPAYSPTSPSYSPTSP 412
P YSP+SP +SP TSP YSPTSPSYSPTSP
Sbjct: 1693 PVYSPTSPNWSPSSPQHQGNSTSPKYSPTSPSYSPTSP 1730
Score = 107 bits (266), Expect = 5e-22
Identities = 73/168 (43%), Positives = 89/168 (52%), Gaps = 48/168 (28%)
Frame = +2
Query: 53 GRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQ-------FSPYVGGM-----A 181
G+SP++ GTP + SP + +P+ A SPY G
Sbjct: 1504 GQSPLNEGGYLGTPDYGAQFSPIQSAGSD---TPSGFATEYSGLGGMSPYAAGSRSPGGG 1560
Query: 182 FSPTS---SP----GYSPSSPGYSPS---------------------SPGYSPTSPGYSP 277
+SPTS + +SPSSPGYSP+ SP ++PTSP YSP
Sbjct: 1561 YSPTSPFNASPSSPNFSPSSPGYSPTSPMMGGGASPGYAVSPRFSPVSPAFTPTSPAYSP 1620
Query: 278 TSPGY-SPTSPGYSPTSPTYSPSSPGY--SPTSPAYSPTSPSYSPTSP 412
TSP + SPTSP YSPTSP YSP+SP SPTSP+YSPTSPSYSPTSP
Sbjct: 1621 TSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYSPTSPSYSPTSP 1668
Score = 99.0 bits (245), Expect = 1e-19
Identities = 63/140 (45%), Positives = 80/140 (57%), Gaps = 29/140 (20%)
Frame = +2
Query: 38 FGMTPGRSPISG--TPYHEGMM--SPSYMLSPNLRLSPT--NDAQFSPYVGGMAFSPT-- 193
+ ++P SP+S TP SPS++ + SPT N + SP + G SP+
Sbjct: 1598 YAVSPRFSPVSPAFTPTSPAYSPTSPSFVSPTSPSYSPTSPNYSPTSPNIHGSPTSPSYS 1657
Query: 194 -SSPGYSPSSPGYSPSSPGY-----------SPTSPGYSPTSPGYSP---------TSPG 310
+SP YSP+SP YSP+SP Y SPTSP YSPTSP +SP TSP
Sbjct: 1658 PTSPSYSPTSPNYSPTSPNYAGNKVSPGSGLSPTSPVYSPTSPNWSPSSPQHQGNSTSPK 1717
Query: 311 YSPTSPTYSPSSPGYSPTSP 370
YSPTSP+YSP+SP +SPTSP
Sbjct: 1718 YSPTSPSYSPTSPNFSPTSP 1737
[148][TOP]
>UniRef100_C6F1F2 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F2_9APIC
Length = 232
Score = 128 bits (321), Expect = 2e-28
Identities = 63/99 (63%), Positives = 69/99 (69%)
Frame = +2
Query: 116 SPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYS 295
SP +LS N + +SP YSP+SP YSP+SP Y PTSP YSPTSP YS
Sbjct: 33 SPKNQLSEMNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYS 92
Query: 296 PTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 93 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSP 131
Score = 111 bits (278), Expect = 2e-23
Identities = 67/120 (55%), Positives = 83/120 (69%), Gaps = 9/120 (7%)
Frame = +2
Query: 80 YHEGMMSPSYMLSPNLRLSPTNDAQFSP-----YVGGMAFSPTSSPGYSPSSPGYSPSSP 244
YH ++SP Y ++ + + SPT+ ++SP +SPTS P YSP+SP YSP+SP
Sbjct: 48 YHS-VVSPVYSVT-SPKYSPTSP-KYSPTSPKYLPTSPKYSPTS-PKYSPTSPKYSPTSP 103
Query: 245 GYSPTSPGYSPTSPGYSPTSPGYSPTSPT-YSPSSPGYSP---TSPAYSPTSPSYSPTSP 412
YSPTSP YSPTSP YSPTSP YSPTSP +PSSP YSP SP +SPTSP+YS +SP
Sbjct: 104 KYSPTSPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISSP 163
Score = 97.1 bits (240), Expect = 6e-19
Identities = 55/117 (47%), Positives = 58/117 (49%), Gaps = 48/117 (41%)
Frame = +2
Query: 206 YSPSSPG------------------------------------------------YSPSS 241
YSP+SP YS +S
Sbjct: 1 YSPTSPTYHVSNNANAGGSSGLNDTKAFYSPTSPKNQLSEMNPNMMKYHSVVSPVYSVTS 60
Query: 242 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP Y PTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 61 PKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 117
Score = 85.9 bits (211), Expect = 1e-15
Identities = 50/104 (48%), Positives = 55/104 (52%), Gaps = 27/104 (25%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP---------------------------T 280
+SPTS P Y S+ + S G + T YSP T
Sbjct: 1 YSPTS-PTYHVSNNANAGGSSGLNDTKAFYSPTSPKNQLSEMNPNMMKYHSVVSPVYSVT 59
Query: 281 SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP Y P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 60 SPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSP 103
Score = 78.2 bits (191), Expect = 3e-13
Identities = 54/120 (45%), Positives = 65/120 (54%), Gaps = 22/120 (18%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SP Y L + + SPT+ ++SP +SPTS P YSP+SP YSP+SP YSPTSP YSP
Sbjct: 74 SPKY-LPTSPKYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPTSPQYSP 128
Query: 278 TSP------------------GYSPTSPGYSPTSPTYSPS----SPGYSPTSPAYSPTSP 391
TSP +SPTSP YS +SP Y S + P SPAY SP
Sbjct: 129 TSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISSPVYDQSGNARNKSQHPLSPAYILQSP 188
[149][TOP]
>UniRef100_B2W4S0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2W4S0_PYRTR
Length = 1742
Score = 128 bits (321), Expect = 2e-28
Identities = 80/146 (54%), Positives = 88/146 (60%), Gaps = 24/146 (16%)
Frame = +2
Query: 47 TPGRSPIS-GTPYHE-GMMSPSYMLSPNL-RLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
+PG SP S GT SP YM SP SPT+ SP ++SPTS GYSP+
Sbjct: 1581 SPGYSPTSPGTASPRFAATSPGYMASPTSPHYSPTSPRYGSPT--SPSYSPTSPAGYSPT 1638
Query: 218 SPGYSPSSPGYSPTSP---------GYSPTSPGYSPTSPGYSPTSPTY----------SP 340
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP Y SP
Sbjct: 1639 SPQYSPTSPNYSPTSPTFMGGATSPAYSPTSPQYSPTSPQYSPTSPQYQATSDRRSPTSP 1698
Query: 341 SSPGYSPTSPAYSPTSP--SYSPTSP 412
+SP YSPTSP YSPTSP S+SPTSP
Sbjct: 1699 TSPQYSPTSPRYSPTSPAGSFSPTSP 1724
Score = 119 bits (298), Expect = 1e-25
Identities = 67/107 (62%), Positives = 75/107 (70%), Gaps = 21/107 (19%)
Frame = +2
Query: 155 FSPYVGGMAFSPTS----SPGY-SPSSPGYSPSSPGYSPTSPG--------------YSP 277
FSPY GG + + SPG+ SP SPG+SP+SPGYSPTSPG SP
Sbjct: 1548 FSPYDGGRSPGGSGFTGMSPGFTSPVSPGFSPTSPGYSPTSPGTASPRFAATSPGYMASP 1607
Query: 278 TSPGYSPTSPGY-SPTSPTYSPSSP-GYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP Y SPTSP+YSP+SP GYSPTSP YSPTSP+YSPTSP
Sbjct: 1608 TSPHYSPTSPRYGSPTSPSYSPTSPAGYSPTSPQYSPTSPNYSPTSP 1654
Score = 107 bits (268), Expect = 3e-22
Identities = 72/140 (51%), Positives = 85/140 (60%), Gaps = 18/140 (12%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSP-----------YVGGM---AF 184
+P SP S P + SPSY + SPT+ Q+SP ++GG A+
Sbjct: 1609 SPHYSPTS--PRYGSPTSPSYSPTSPAGYSPTSP-QYSPTSPNYSPTSPTFMGGATSPAY 1665
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSP--GYS 358
SPTS P YSP+SP YSP+SP Y TS SPT SPTSP YSPTSP YSP+SP +S
Sbjct: 1666 SPTS-PQYSPTSPQYSPTSPQYQATSDRRSPT----SPTSPQYSPTSPRYSPTSPAGSFS 1720
Query: 359 PTSPAYSPTS--PSYSPTSP 412
PTSP YSPTS P+YSPTSP
Sbjct: 1721 PTSPRYSPTSPGPAYSPTSP 1740
Score = 83.2 bits (204), Expect = 8e-15
Identities = 65/174 (37%), Positives = 76/174 (43%), Gaps = 59/174 (33%)
Frame = +2
Query: 68 SGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGM---------AFSPTSSPGYSPSS 220
+GT +G +P + SP Y GGM +FSP ++ G
Sbjct: 1487 AGTYLSDGAATPYDLGSPT-------------YEGGMGMGGGYDQVSFSPMAAAGGGDDQ 1533
Query: 221 PGY-----SPSSPGYSPTS----------------------PGYSPTSPGYSPTSPG--- 310
G+ S S G+SP PG+SPTSPGYSPTSPG
Sbjct: 1534 GGFTAYGGSYGSGGFSPYDGGRSPGGSGFTGMSPGFTSPVSPGFSPTSPGYSPTSPGTAS 1593
Query: 311 ------------------YSPTSPTY-SPSSPGYSPTSPA-YSPTSPSYSPTSP 412
YSPTSP Y SP+SP YSPTSPA YSPTSP YSPTSP
Sbjct: 1594 PRFAATSPGYMASPTSPHYSPTSPRYGSPTSPSYSPTSPAGYSPTSPQYSPTSP 1647
[150][TOP]
>UniRef100_O77375 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
RepID=O77375_PLAF7
Length = 2457
Score = 127 bits (320), Expect = 3e-28
Identities = 65/105 (61%), Positives = 74/105 (70%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SP+Y + N SPT+ + + + SP YS +SP YSP+SP YSPTSP YSP
Sbjct: 2253 SPTYNAN-NAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSP 2311
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 2312 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 2356
Score = 114 bits (286), Expect = 3e-24
Identities = 66/118 (55%), Positives = 79/118 (66%), Gaps = 11/118 (9%)
Frame = +2
Query: 92 MMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY 271
+MSP Y ++ + + SPT+ +SPTS P YSP+SP YSP+SP YSPTSP Y
Sbjct: 2283 VMSPVYSVT-SPKYSPTSPK----------YSPTS-PKYSPTSPKYSPTSPKYSPTSPKY 2330
Query: 272 SPTSPGYSPTSPGYSPTSPTYSPSSP--------GYSP---TSPAYSPTSPSYSPTSP 412
SPTSP YSPTSP YSPTSP YSP+SP YSP TSP +SPTSP+YS +SP
Sbjct: 2331 SPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSP 2388
Score = 62.0 bits (149), Expect = 2e-08
Identities = 48/112 (42%), Positives = 58/112 (51%), Gaps = 21/112 (18%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSP--- 265
SP Y SP + SPT+ ++SP +SPTS P YSP+SP YSP+SP YSPTSP
Sbjct: 2306 SPKYSPTSP--KYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPTSPVAQ 2359
Query: 266 ---------------GYSPTSPGYSPTSPGY--SPTSPTYSPSSPGYSPTSP 370
+SPTSP YS +SP Y S + P SP Y SP
Sbjct: 2360 NIASPNYSPYSITSPKFSPTSPAYSISSPVYDKSGVVNAHQPMSPAYILQSP 2411
Score = 59.7 bits (143), Expect = 1e-07
Identities = 69/223 (30%), Positives = 83/223 (37%), Gaps = 105/223 (47%)
Frame = +2
Query: 59 SPISGTP-YHEGMMSPSY-------MLSPNLRLSPTNDAQFSPY-----------VGGMA 181
SP+ +P Y+ ++SP+ +LSP L D SP +GG
Sbjct: 2101 SPLPFSPTYNANLLSPTAPIDNVNNLLSPQYNLQNYGDNVMSPTSKDINNLDTLKLGGK- 2159
Query: 182 FSPTSSPGYSPSSPGYSPSSPG--------------YSPTSPG------YSPT------- 280
FSPT SP SP+S +SP SP +SP + +SP
Sbjct: 2160 FSPTQSPK-SPTSVMHSPFSPFDHQNQQPVDATNLLFSPKNNNIMNYNVFSPKPNINNNV 2218
Query: 281 --SPG-YSPT-----------------SPGYSPTSPT----------------------- 331
SP YSP SP YSPTSPT
Sbjct: 2219 IQSPNIYSPNPMLDIFSPKPQINHNIYSPSYSPTSPTYNANNAYYSPTSPKNQNDQMNVN 2278
Query: 332 ----------------YSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 2279 SQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 2321
[151][TOP]
>UniRef100_B0XMU6 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
RepID=B0XMU6_ASPFC
Length = 1750
Score = 127 bits (320), Expect = 3e-28
Identities = 72/138 (52%), Positives = 87/138 (63%), Gaps = 16/138 (11%)
Frame = +2
Query: 47 TPGRSPISG---TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY--- 208
+PG SP S T G+ SP +M SP + + A SP A+SPTS P Y
Sbjct: 1577 SPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSP-----AYSPTS-PAYGQA 1630
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY----------S 358
SP+SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP+SP S
Sbjct: 1631 SPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTS 1690
Query: 359 PTSPAYSPTSPSYSPTSP 412
PTSP Y+PTSP +SPTSP
Sbjct: 1691 PTSPKYTPTSPGWSPTSP 1708
Score = 118 bits (296), Expect = 2e-25
Identities = 73/152 (48%), Positives = 83/152 (54%), Gaps = 26/152 (17%)
Frame = +2
Query: 35 DFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVG-GMAFSP--TSSPG 205
D G S GTP E SP SP ++ P G G FSP TS G
Sbjct: 1508 DTGSPMQESAFIGTPDPESAFSPIRQAGAE---SPGGFTEYQPTGGFGGGFSPAATSPAG 1564
Query: 206 YSPSSP-GYSPSSPGYSPTS-------------------PGYSPTSPGYSPTSPGYSPTS 325
YSPSSP +P+SPGYSPTS PG+SP SP ++PTSP YSPTS
Sbjct: 1565 YSPSSPFSANPTSPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTS 1624
Query: 326 PTY---SPSSPGYSPTSPAYSPTSPSYSPTSP 412
P Y SP+SP YSPTSP +SPTSP+YSPTSP
Sbjct: 1625 PAYGQASPTSPSYSPTSPGFSPTSPNYSPTSP 1656
Score = 105 bits (261), Expect = 2e-21
Identities = 66/134 (49%), Positives = 81/134 (60%), Gaps = 14/134 (10%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S SPSY SP + N + SP +FSP +SP +SP+SP
Sbjct: 1617 SPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSP-----SFSP-ASPAFSPTSP 1670
Query: 224 GYSPSSPGY----------SPTSPGYSPTSPGYSPTSP-GYSPTSPTY--SPSSPGYSPT 364
YSP+SP SPTSP Y+PTSPG+SPTSP YSPTSP + SP+SPG PT
Sbjct: 1671 SYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPG-GPT 1729
Query: 365 SPAYSPTSPSYSPT 406
SP YSPTSP++SP+
Sbjct: 1730 SPGYSPTSPAFSPS 1743
Score = 85.9 bits (211), Expect = 1e-15
Identities = 59/117 (50%), Positives = 73/117 (62%), Gaps = 8/117 (6%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMA--FSPTS--SPGYS 211
+PG SP S + SPS+ SP + + + SP +GG SPTS SP Y+
Sbjct: 1641 SPGFSPTSP---NYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYT 1697
Query: 212 PSSPGYSPSSPG-YSPTSPGY--SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
P+SPG+SP+SP YSPTSP + SPTSPG PTSPGYSPTSP +SPS Y P+S A
Sbjct: 1698 PTSPGWSPTSPQTYSPTSPNFAGSPTSPG-GPTSPGYSPTSPAFSPS---YVPSSSA 1750
[152][TOP]
>UniRef100_A1D1U9 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
RepID=A1D1U9_NEOFI
Length = 1750
Score = 127 bits (320), Expect = 3e-28
Identities = 72/138 (52%), Positives = 87/138 (63%), Gaps = 16/138 (11%)
Frame = +2
Query: 47 TPGRSPISG---TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY--- 208
+PG SP S T G+ SP +M SP + + A SP A+SPTS P Y
Sbjct: 1577 SPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSP-----AYSPTS-PAYGQA 1630
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY----------S 358
SP+SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP+SP S
Sbjct: 1631 SPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTS 1690
Query: 359 PTSPAYSPTSPSYSPTSP 412
PTSP Y+PTSP +SPTSP
Sbjct: 1691 PTSPKYTPTSPGWSPTSP 1708
Score = 118 bits (295), Expect = 2e-25
Identities = 73/152 (48%), Positives = 83/152 (54%), Gaps = 26/152 (17%)
Frame = +2
Query: 35 DFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVG-GMAFSP--TSSPG 205
D G S GTP E SP SP ++ P G G FSP TS G
Sbjct: 1508 DTGSPMQESAYIGTPDPESAFSPIRQAGAE---SPGGFTEYQPTGGFGGGFSPAATSPAG 1564
Query: 206 YSPSSP-GYSPSSPGYSPTS-------------------PGYSPTSPGYSPTSPGYSPTS 325
YSPSSP +P+SPGYSPTS PG+SP SP ++PTSP YSPTS
Sbjct: 1565 YSPSSPFSANPTSPGYSPTSSYSPTSPGMGITSPRFMTSPGFSPASPSFAPTSPAYSPTS 1624
Query: 326 PTY---SPSSPGYSPTSPAYSPTSPSYSPTSP 412
P Y SP+SP YSPTSP +SPTSP+YSPTSP
Sbjct: 1625 PAYGQASPTSPSYSPTSPGFSPTSPNYSPTSP 1656
Score = 105 bits (261), Expect = 2e-21
Identities = 66/134 (49%), Positives = 81/134 (60%), Gaps = 14/134 (10%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S SPSY SP + N + SP +FSP +SP +SP+SP
Sbjct: 1617 SPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSP-----SFSP-ASPAFSPTSP 1670
Query: 224 GYSPSSPGY----------SPTSPGYSPTSPGYSPTSP-GYSPTSPTY--SPSSPGYSPT 364
YSP+SP SPTSP Y+PTSPG+SPTSP YSPTSP + SP+SPG PT
Sbjct: 1671 SYSPTSPAIGGAGRHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPG-GPT 1729
Query: 365 SPAYSPTSPSYSPT 406
SP YSPTSP++SP+
Sbjct: 1730 SPGYSPTSPAFSPS 1743
Score = 85.9 bits (211), Expect = 1e-15
Identities = 59/117 (50%), Positives = 73/117 (62%), Gaps = 8/117 (6%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMA--FSPTS--SPGYS 211
+PG SP S + SPS+ SP + + + SP +GG SPTS SP Y+
Sbjct: 1641 SPGFSPTSP---NYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAGRHLSPTSPTSPKYT 1697
Query: 212 PSSPGYSPSSPG-YSPTSPGY--SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
P+SPG+SP+SP YSPTSP + SPTSPG PTSPGYSPTSP +SPS Y P+S A
Sbjct: 1698 PTSPGWSPTSPQTYSPTSPNFAGSPTSPG-GPTSPGYSPTSPAFSPS---YVPSSSA 1750
[153][TOP]
>UniRef100_Q4P7Q0 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
RepID=Q4P7Q0_USTMA
Length = 1774
Score = 127 bits (318), Expect = 5e-28
Identities = 74/131 (56%), Positives = 82/131 (62%), Gaps = 9/131 (6%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P SP S P G SPS SP R Q+SP FSPTS P YSP+SP
Sbjct: 1621 SPNYSPSS--PAGAGY-SPS---SPAGRYGAATSPQYSP--ASPKFSPTS-PNYSPASPA 1671
Query: 227 YSPSSPGYSPTSP---------GYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
Y+P+SP YSPTSP G+SPTSP YSPTSP YSP SP +SP+SP YSP SP YS
Sbjct: 1672 YTPTSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTSPQYSPASPAFSPTSPQYSPASPQYS 1731
Query: 380 PTSPSYSPTSP 412
PTSP YSPTSP
Sbjct: 1732 PTSPQYSPTSP 1742
Score = 117 bits (293), Expect = 4e-25
Identities = 79/192 (41%), Positives = 93/192 (48%), Gaps = 61/192 (31%)
Frame = +2
Query: 20 YMDGLDFGMTPGRSPI---SGTPYHEGMMSPSYM-LSPNLRLSPTND-AQFSPYVGGM-- 178
Y D L G +P R+P+ S Y +SP Y+ SP SP SP+ G M
Sbjct: 1530 YNDYLLSGTSPMRTPLGAQSPAGYGFSPVSPGYVPTSPGYATSPAGALGGMSPWTGNMGA 1589
Query: 179 ---AFSPTS--------SPGYSPSSPGYSPSSPGYSP----------------------- 256
A+SPTS SP YSP+SP YSP+SP YSP
Sbjct: 1590 TSPAYSPTSPRIFGGATSPSYSPTSPSYSPASPNYSPSSPAGAGYSPSSPAGRYGAATSP 1649
Query: 257 -----------TSPGYSPTSPGYSPTSPGYSPTSPT---------YSPSSPGYSPTSPAY 376
TSP YSP SP Y+PTSP YSPTSP +SP+SP YSPTSP Y
Sbjct: 1650 QYSPASPKFSPTSPNYSPASPAYTPTSPVYSPTSPAMAGRGGGKGFSPTSPAYSPTSPQY 1709
Query: 377 SPTSPSYSPTSP 412
SP SP++SPTSP
Sbjct: 1710 SPASPAFSPTSP 1721
Score = 103 bits (257), Expect = 6e-21
Identities = 62/117 (52%), Positives = 73/117 (62%), Gaps = 10/117 (8%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP-- 223
G SP S + SP Y SP + SPT+ +SP A++PTS P YSP+SP
Sbjct: 1633 GYSPSSPAGRYGAATSPQYSPASP--KFSPTSP-NYSP--ASPAYTPTS-PVYSPTSPAM 1686
Query: 224 -------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
G+SP+SP YSPTSP YSP SP +SPTSP YSP SP YSP+SP YSPTSPA
Sbjct: 1687 AGRGGGKGFSPTSPAYSPTSPQYSPASPAFSPTSPQYSPASPQYSPTSPQYSPTSPA 1743
[154][TOP]
>UniRef100_Q84KP6 DNA-directed RNA polymerase n=1 Tax=Cyanidioschyzon merolae
RepID=Q84KP6_CYAME
Length = 1819
Score = 126 bits (316), Expect = 9e-28
Identities = 66/92 (71%), Positives = 72/92 (78%), Gaps = 7/92 (7%)
Frame = +2
Query: 158 SPYVGGM----AFSPTSSPGYSPSSPGY-SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPT 322
SP GG AFSP SSP YSP+SP SP+SP YSPTSP YSPTSP YSPTSP YSPT
Sbjct: 1617 SPAGGGTGTLGAFSP-SSPAYSPTSPRLVSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPT 1675
Query: 323 SPTYSPSSPGYSPTSPAYSPTSP--SYSPTSP 412
SP YSP+SP YSPTSPAYSP+SP +YSP+SP
Sbjct: 1676 SPAYSPTSPAYSPTSPAYSPSSPNVAYSPSSP 1707
Score = 123 bits (309), Expect = 6e-27
Identities = 76/139 (54%), Positives = 87/139 (62%), Gaps = 19/139 (13%)
Frame = +2
Query: 53 GRSPISGT-PYHEGMMSPSYMLSPNLRLSPTNDAQ-----FSPYVGGMAFSPTS------ 196
GR + GT P+ S + +PN SP FSP A+SPTS
Sbjct: 1592 GRYGLGGTSPFASFSASAT---TPNWAPSPAGGGTGTLGAFSP--SSPAYSPTSPRLVSP 1646
Query: 197 -SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG--YSPTS 367
SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSPSSP YSP+S
Sbjct: 1647 TSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPSSPNVAYSPSS 1706
Query: 368 P--AYSPTSP--SYSPTSP 412
P AYSP+SP +YSP+SP
Sbjct: 1707 PNVAYSPSSPNVAYSPSSP 1725
Score = 122 bits (306), Expect = 1e-26
Identities = 78/160 (48%), Positives = 87/160 (54%), Gaps = 27/160 (16%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAF--- 184
P+Y G GM TP + SP SP + SP S YVGG A
Sbjct: 1537 PAYTPGATPGMASDGFAAPWTP-SLNLASPYGSFSPAVGFSPAT----STYVGGDAMKDA 1591
Query: 185 --------SPTSS-------PGYSPSSPG--------YSPSSPGYSPTSPG-YSPTSPGY 292
SP +S P ++PS G +SPSSP YSPTSP SPTSP Y
Sbjct: 1592 GRYGLGGTSPFASFSASATTPNWAPSPAGGGTGTLGAFSPSSPAYSPTSPRLVSPTSPAY 1651
Query: 293 SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSP YSPTSP YSP+SP YSPTSPAYSPTSP+YSPTSP
Sbjct: 1652 SPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSPAYSPTSP 1691
Score = 99.8 bits (247), Expect = 9e-20
Identities = 67/123 (54%), Positives = 86/123 (69%), Gaps = 18/123 (14%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTN-DAQFSPYVGGMAFSPTS-SPGYSPSSPG--YSPSSPG--YSP 256
SP+Y SPN+ SP++ + +SP +A+SP+S + YSPSSP YSPSSP YSP
Sbjct: 1690 SPAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSP 1749
Query: 257 TSPG--YSPTSPG--YSPTSPG--YSPTSPT-YSPSSPG--YSPTSP--AYSPTSPSYSP 403
+SP YSP+SP YSP+SP YSP+SP YSPSSP YSP+SP AYSP+SP++SP
Sbjct: 1750 SSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSSPNVAYSPSSPNVAYSPSSPAFSP 1809
Query: 404 TSP 412
+SP
Sbjct: 1810 SSP 1812
Score = 97.8 bits (242), Expect = 3e-19
Identities = 65/117 (55%), Positives = 81/117 (69%), Gaps = 15/117 (12%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTN-DAQFSPYVGGMAFSPTS-SPGYSPSSPG--YSPSSPG--YSPT 259
SPS SPN+ SP++ + +SP +A+SP+S + YSPSSP YSPSSP YSP+
Sbjct: 1703 SPS---SPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPS 1759
Query: 260 SPG--YSPTSPG--YSPTSP-GYSPTSPT--YSPSSPG--YSPTSPAYSPTSPSYSP 403
SP YSP+SP YSP+SP YSP+SP YSPSSP YSP+SPA+SP+SP YSP
Sbjct: 1760 SPNVAYSPSSPNVAYSPSSPVAYSPSSPNVAYSPSSPNVAYSPSSPAFSPSSPVYSP 1816
Score = 76.6 bits (187), Expect = 8e-13
Identities = 48/92 (52%), Positives = 63/92 (68%), Gaps = 9/92 (9%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTN-DAQFSPYVGGMAFSPTS-SPGYSPSSPG--YSPSSP-GYSPTS 262
SPS SPN+ SP++ + +SP +A+SP+S + YSPSSP YSPSSP YSP+S
Sbjct: 1730 SPS---SPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPNVAYSPSSPVAYSPSS 1786
Query: 263 PG--YSPTSPG--YSPTSPGYSPTSPTYSPSS 346
P YSP+SP YSP+SP +SP+SP YSP +
Sbjct: 1787 PNVAYSPSSPNVAYSPSSPAFSPSSPVYSPKN 1818
[155][TOP]
>UniRef100_C6F1E9 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1E9_PLAVI
Length = 225
Score = 126 bits (316), Expect = 9e-28
Identities = 63/94 (67%), Positives = 71/94 (75%), Gaps = 1/94 (1%)
Frame = +2
Query: 134 SPTNDA-QFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPG 310
SPTN + +P + M + SP YS +SP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 33 SPTNQLDEVNPNM--MKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPK 90
Query: 311 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSPTSP YSP+SP YSPTSP YSPTSP YSP+SP
Sbjct: 91 YSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSP 124
Score = 112 bits (280), Expect = 1e-23
Identities = 66/115 (57%), Positives = 83/115 (72%), Gaps = 4/115 (3%)
Frame = +2
Query: 80 YHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 259
YH ++SP Y ++ + + SPT+ ++SP +SPTS P YSP+SP YSP+SP YSPT
Sbjct: 48 YHS-VVSPVYSVT-SPKYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPT 101
Query: 260 SPGYSPTSPGYSPTSPGYSPTSPT-YSPSSPGYSP---TSPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP YSP+SP +PSSP YSP SP +SPTSP+YS +SP
Sbjct: 102 SPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISSP 156
Score = 108 bits (270), Expect = 2e-22
Identities = 69/144 (47%), Positives = 83/144 (57%), Gaps = 29/144 (20%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSYML---SPNLR-----LSPT---NDAQFSPYVGGMAFSPTSS 199
G S ++GT + SP+ L +PN+ +SP ++SP +SPTS
Sbjct: 18 GSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPT--SPKYSPTS- 74
Query: 200 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSP---------- 349
P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSPSSP
Sbjct: 75 PKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHY 134
Query: 350 --------GYSPTSPAYSPTSPSY 397
+SPTSPAYS +SP Y
Sbjct: 135 SPYAIASPKFSPTSPAYSISSPVY 158
Score = 89.4 bits (220), Expect = 1e-16
Identities = 51/104 (49%), Positives = 56/104 (53%), Gaps = 27/104 (25%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP---------------------------T 280
+SPTS P Y ++P S G + T YSP T
Sbjct: 1 YSPTS-PTYHLTNPASGGGSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVT 59
Query: 281 SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 60 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 103
Score = 62.8 bits (151), Expect = 1e-08
Identities = 51/124 (41%), Positives = 60/124 (48%), Gaps = 26/124 (20%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP Y SP + SPT+ ++SP +SPTS P YSP+SP YSP+SP YSPTSP YS
Sbjct: 67 SPKYSPTSP--KYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPTSPQYS 120
Query: 275 P-------------------------TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
P TSP YS +SP Y + S S P SPAY
Sbjct: 121 PSSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISSPVYDQSGNARSKSQ---HPLSPAYI 177
Query: 380 PTSP 391
SP
Sbjct: 178 LQSP 181
[156][TOP]
>UniRef100_Q9HGZ5 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=Q9HGZ5_ASPOR
Length = 1748
Score = 126 bits (316), Expect = 9e-28
Identities = 73/146 (50%), Positives = 92/146 (63%), Gaps = 18/146 (12%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG----TPYHEGMMSPSYMLSPNLRLSPTND--AQFSPYVG--GMAF 184
G G +P + +G +P+ SP Y SP+ SPT+ A SP F
Sbjct: 1550 GFGGGFSPAATSPAGYSPSSPFSANPTSPGY--SPSSSYSPTSPGMAMTSPRFSMTSPGF 1607
Query: 185 SPTSSPGYSPSSPGYSPSSPGY---SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY 355
SP +SP ++P+SP YSP+SP Y SPTSP YSPTSPG+SPTSP YSPTSP++SP+SP +
Sbjct: 1608 SP-ASPSFAPTSPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAF 1666
Query: 356 SPTSPAYSPTSPS-------YSPTSP 412
SPTSP+YSPTSP+ SPTSP
Sbjct: 1667 SPTSPSYSPTSPAIGGAARHLSPTSP 1692
Score = 122 bits (307), Expect = 9e-27
Identities = 73/139 (52%), Positives = 88/139 (63%), Gaps = 17/139 (12%)
Frame = +2
Query: 47 TPGRSPISG-TPYHEGMM--SPSY-MLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY-- 208
+PG SP S +P GM SP + M SP + + A SP A+SPTS P Y
Sbjct: 1577 SPGYSPSSSYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSP-----AYSPTS-PAYGQ 1630
Query: 209 -SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY---------- 355
SP+SP YSP+SPG+SPTSP YSPTSP +SP SP +SPTSP+YSP+SP
Sbjct: 1631 ASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAARHLSPT 1690
Query: 356 SPTSPAYSPTSPSYSPTSP 412
SPTSP Y+PTSP +SPTSP
Sbjct: 1691 SPTSPKYTPTSPGWSPTSP 1709
Score = 116 bits (290), Expect = 9e-25
Identities = 71/139 (51%), Positives = 86/139 (61%), Gaps = 14/139 (10%)
Frame = +2
Query: 38 FGMT-PGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
F MT PG SP S + SP+Y SPT+ A ++SPTS PG+SP
Sbjct: 1600 FSMTSPGFSPASPS---FAPTSPAY--------SPTSPAYGQASPTSPSYSPTS-PGFSP 1647
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGY----------SPTSPTYSPSSPGYSPT 364
+SP YSP+SP +SP SP +SPTSP YSPTSP SPTSP Y+P+SPG+SPT
Sbjct: 1648 TSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAIGGAARHLSPTSPTSPKYTPTSPGWSPT 1707
Query: 365 SP-AYSPTSPSY--SPTSP 412
SP YSPTSP++ SPTSP
Sbjct: 1708 SPQTYSPTSPNFAGSPTSP 1726
Score = 103 bits (257), Expect = 6e-21
Identities = 65/132 (49%), Positives = 76/132 (57%), Gaps = 18/132 (13%)
Frame = +2
Query: 71 GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVG-GMAFSPTSSPGYSPSSPGYSPSSP- 244
GTP E SP SP ++ P G G FSP ++ S GYSPSSP
Sbjct: 1520 GTPDPESNFSPIRQAGAE---SPGGFTEYQPTGGFGGGFSPAAT-----SPAGYSPSSPF 1571
Query: 245 GYSPTSPGYSP-------------TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY--- 376
+PTSPGYSP TSP +S TSPG+SP SP+++P+SP YSPTSPAY
Sbjct: 1572 SANPTSPGYSPSSSYSPTSPGMAMTSPRFSMTSPGFSPASPSFAPTSPAYSPTSPAYGQA 1631
Query: 377 SPTSPSYSPTSP 412
SPTSPSYSPTSP
Sbjct: 1632 SPTSPSYSPTSP 1643
Score = 89.7 bits (221), Expect = 9e-17
Identities = 63/135 (46%), Positives = 75/135 (55%), Gaps = 27/135 (20%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM--------LSPNLRLSPTNDAQFSPYVGGMAFSPTSSP 202
+P SP S SPSY SPN SPT+ + FSP AFSPTS P
Sbjct: 1618 SPAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNY--SPTSPS-FSP--ASPAFSPTS-P 1671
Query: 203 GYSPSSPGY----------SPSSPGYSPTSPGYSPTSPG-YSPTSPGYS--------PTS 325
YSP+SP SP+SP Y+PTSPG+SPTSP YSPTSP ++ PTS
Sbjct: 1672 SYSPTSPAIGGAARHLSPTSPTSPKYTPTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTS 1731
Query: 326 PTYSPSSPGYSPTSP 370
P YSP+SP +SP+SP
Sbjct: 1732 PGYSPTSPAFSPSSP 1746
[157][TOP]
>UniRef100_Q5EXZ8 RNA polymerase II largest subunit (Fragment) n=1 Tax=Periplaneta
americana RepID=Q5EXZ8_PERAM
Length = 97
Score = 124 bits (312), Expect = 2e-27
Identities = 61/93 (65%), Positives = 71/93 (76%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGY 313
SPT+ + +SP +P++S YSPSSP YSP+SP YSPTSP YSP+S YSPTSP Y
Sbjct: 2 SPTSPS-YSP--SSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTY 58
Query: 314 SPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+PTSP YSPSSP YSP P YSPTSP+YSPTSP
Sbjct: 59 TPTSPNYSPSSPTYSPAVPGYSPTSPTYSPTSP 91
Score = 120 bits (302), Expect = 4e-26
Identities = 60/100 (60%), Positives = 73/100 (73%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY S + + +P+ ++SP SSP YSP+SP YSP+SP YSP+S YSP
Sbjct: 5 SPSYSPS-SPQHTPSASTRYSP----------SSPSYSPTSPTYSPTSPQYSPSSSKYSP 53
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
TSP Y+PTSP YSP+SPTYSP+ PGYSPTSP YSPTSP+Y
Sbjct: 54 TSPTYTPTSPNYSPSSPTYSPAVPGYSPTSPTYSPTSPAY 93
Score = 112 bits (281), Expect = 1e-23
Identities = 57/85 (67%), Positives = 64/85 (75%), Gaps = 8/85 (9%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPS-SPGYSPTSPGYSPTSPGYSPTSP-------GYSPTSPTYS 337
+SPTS P YSPSSP ++PS S YSP+SP YSPTSP YSPTSP YSPTSPTY+
Sbjct: 1 YSPTS-PSYSPSSPQHTPSASTRYSPSSPSYSPTSPTYSPTSPQYSPSSSKYSPTSPTYT 59
Query: 338 PSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSP+SP YSP P YSPTSP
Sbjct: 60 PTSPNYSPSSPTYSPAVPGYSPTSP 84
Score = 71.2 bits (173), Expect = 3e-11
Identities = 43/88 (48%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS------SPGY 208
+P +P + T Y SPSY SP Q+SP +SPTS SP Y
Sbjct: 12 SPQHTPSASTRYSPS--SPSY--SPTSPTYSPTSPQYSP--SSSKYSPTSPTYTPTSPNY 65
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGY 292
SPSSP YSP+ PGYSPTSP YSPTSP Y
Sbjct: 66 SPSSPTYSPAVPGYSPTSPTYSPTSPAY 93
[158][TOP]
>UniRef100_C6F1F3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium cynomolgi
RepID=C6F1F3_9APIC
Length = 225
Score = 124 bits (311), Expect = 3e-27
Identities = 62/94 (65%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Frame = +2
Query: 134 SPTND-AQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPG 310
SP N ++ +P + M + SP YS +SP YSP+SP YSPTSP Y PTSP YSPTSP
Sbjct: 33 SPKNQLSEMNPNM--MKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYLPTSPKYSPTSPK 90
Query: 311 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 91 YSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSP 124
Score = 111 bits (278), Expect = 2e-23
Identities = 66/115 (57%), Positives = 82/115 (71%), Gaps = 4/115 (3%)
Frame = +2
Query: 80 YHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 259
YH ++SP Y ++ + + SPT+ ++SP + PTS P YSP+SP YSP+SP YSPT
Sbjct: 48 YHS-VVSPVYSVT-SPKYSPTSP-KYSPT--SPKYLPTS-PKYSPTSPKYSPTSPKYSPT 101
Query: 260 SPGYSPTSPGYSPTSPGYSPTSPT-YSPSSPGYSP---TSPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP YSPTSP +PSSP YSP SP +SPTSP+YS +SP
Sbjct: 102 SPKYSPTSPKYSPTSPQYSPTSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISSP 156
Score = 97.1 bits (240), Expect = 6e-19
Identities = 55/117 (47%), Positives = 58/117 (49%), Gaps = 48/117 (41%)
Frame = +2
Query: 206 YSPSSPG------------------------------------------------YSPSS 241
YSP+SP YS +S
Sbjct: 1 YSPTSPTYHLSNNANAGGSSGLNDTKAFYSPTSPKNQLSEMNPNMMKYHSVVSPVYSVTS 60
Query: 242 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP Y PTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 61 PKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 117
Score = 85.5 bits (210), Expect = 2e-15
Identities = 50/104 (48%), Positives = 55/104 (52%), Gaps = 27/104 (25%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP---------------------------T 280
+SPTS P Y S+ + S G + T YSP T
Sbjct: 1 YSPTS-PTYHLSNNANAGGSSGLNDTKAFYSPTSPKNQLSEMNPNMMKYHSVVSPVYSVT 59
Query: 281 SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP Y P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 60 SPKYSPTSPKYSPTSPKYLPTSPKYSPTSPKYSPTSPKYSPTSP 103
Score = 64.3 bits (155), Expect = 4e-09
Identities = 48/116 (41%), Positives = 60/116 (51%), Gaps = 18/116 (15%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSP---- 265
SP Y L + + SPT+ ++SP +SPTS P YSP+SP YSP+SP YSPTSP
Sbjct: 74 SPKY-LPTSPKYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPQYSPTSPVPNN 128
Query: 266 --------------GYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
+SPTSP YS +SP Y + + S P SPAY SP
Sbjct: 129 PSSPHYSPYAIASPKFSPTSPAYSISSPVYDQSGNARNKSQ---HPLSPAYILQSP 181
[159][TOP]
>UniRef100_B4R347 RNA polymerase II 215kD subunit n=1 Tax=Drosophila simulans
RepID=B4R347_DROSI
Length = 552
Score = 124 bits (310), Expect = 4e-27
Identities = 79/176 (44%), Positives = 87/176 (49%), Gaps = 56/176 (31%)
Frame = +2
Query: 53 GRSPISGTPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT--SSPGYSPSS 220
G SP S +P H G SP +SP SP+ +SP S +SP YSPSS
Sbjct: 209 GMSP-SWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 267
Query: 221 PGYSPSSP-------------------GYSPTSPGYSPTSPGYSPT-------------- 301
P YSP+SP GYSP+S GYSPTSPGYSPT
Sbjct: 268 PNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGS 327
Query: 302 -------------------SPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP+YSPSSP YSPTSP YSPTSPSYSPTSP
Sbjct: 328 NIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSP 383
Score = 122 bits (306), Expect = 1e-26
Identities = 71/132 (53%), Positives = 80/132 (60%), Gaps = 8/132 (6%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG--YSP 214
G +P S S T SP Y SPT Q SP G S SPG YSP
Sbjct: 295 GYSPSSSGYSPT-------SPGY--------SPTAQFQSSPSFAGSG-SNIYSPGNAYSP 338
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
SS YSP+SP YSPTSP YSP+SP YSPTSP YSPTSP+YSP+SP Y+P +P+YSPTSP+
Sbjct: 339 SSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPN 398
Query: 395 ------YSPTSP 412
YSP SP
Sbjct: 399 YSASPQYSPASP 410
Score = 104 bits (259), Expect = 3e-21
Identities = 71/153 (46%), Positives = 88/153 (57%), Gaps = 20/153 (13%)
Frame = +2
Query: 14 PSYMD-GLDFGMTPGRSPISGTPYHEGMM----SPSYML-SPNLRLSPTNDAQFSPYVGG 175
PSY ++ +P SP S G+ SP+Y SP+ SP Q++P G
Sbjct: 390 PSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSP-GSPQYTP--GS 446
Query: 176 MAFSPTSSPGYSPSSPGYSPSSPGYSP-------------TSPGYSPTSPGYSPTSPGYS 316
+SP +SP YSP+SP YSPSSP +SP TSP YSP YSP+S YS
Sbjct: 447 PQYSP-ASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYS 505
Query: 317 PTSPTYSPSSPGYSPTSPAYSPTSPS-YSPTSP 412
PTSPTY+P++ YSPTSP YSPT+PS YSP SP
Sbjct: 506 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPKSP 538
Score = 103 bits (258), Expect = 5e-21
Identities = 66/135 (48%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Frame = +2
Query: 47 TPGRSPIS---GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
+PG SP + +P G S S + SP SP++ + +SP ++SPTS P YSPS
Sbjct: 307 SPGYSPTAQFQSSPSFAG--SGSNIYSPGNAYSPSS-SNYSP--NSPSYSPTS-PSYSPS 360
Query: 218 SPGYSPSSP----------GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTS 367
SP YSP+SP PTSP Y+P +P YSPTSP YS SP YSP+SP YS T
Sbjct: 361 SPSYSPTSPCYSPTSPSYS---PTSPNYTPVTPSYSPTSPNYS-ASPQYSPASPAYSQTG 416
Query: 368 PAYSPTSPSYSPTSP 412
YSPTSP+YSP SP
Sbjct: 417 VKYSPTSPTYSPPSP 431
Score = 103 bits (257), Expect = 6e-21
Identities = 59/111 (53%), Positives = 72/111 (64%), Gaps = 7/111 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS-----SPGYSPSSPGYSPSSPGYSPTS 262
SPSY SPT+ ++P ++SPTS SP YSP+SP YS + YSPTS
Sbjct: 375 SPSY--------SPTSP-NYTPVTP--SYSPTSPNYSASPQYSPASPAYSQTGVKYSPTS 423
Query: 263 PGYSPTSPGY--SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
P YSP SP Y SP SP Y+P SP YSP+SP YSPTSP YSP+SP +SP++
Sbjct: 424 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN 474
Score = 102 bits (254), Expect = 1e-20
Identities = 61/119 (51%), Positives = 72/119 (60%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPS------------- 238
SPSY SP Q+SP +SPTS P YSPSSP +SPS
Sbjct: 430 SPSYDGSPGSPQYTPGSPQYSP--ASPKYSPTS-PLYSPSSPQHSPSNQYSPTGSTYSAT 486
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSPTSPSYSPTSP 412
SP YSP YSP+S YSPTSP Y+PT+ YSP+SP YSPT+P+ YSP SP+YSP+SP
Sbjct: 487 SPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSSP 545
Score = 96.7 bits (239), Expect = 7e-19
Identities = 63/130 (48%), Positives = 79/130 (60%), Gaps = 2/130 (1%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPIS-GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY DG +PG + G+P + SP Y SP L + Q SP +SP
Sbjct: 431 PSY-DG-----SPGSPQYTPGSPQYSPA-SPKY--SPTSPLYSPSSPQHSP---SNQYSP 478
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTS 367
T S YS +SP YSP+ YSP+S YSPTSP Y+PT+ YSPTSP YSP++P YSP S
Sbjct: 479 TGST-YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPKS 537
Query: 368 PAYSPTSPSY 397
PAYSP+SP++
Sbjct: 538 PAYSPSSPTF 547
Score = 83.6 bits (205), Expect = 6e-15
Identities = 55/138 (39%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G++ T G S + G G S M P N ++ G ++ P +
Sbjct: 140 GIEIPNTLGNSMLGGAAMFIGGGSTPSMTPPMTPWVNCNTPRYFSPPGHVSAMTPGGPSF 199
Query: 209 SPSSPG-YSPSSPGYSPTSPGYSPTSPG-----YSP----TSPGYSPTSPTYSPSSPGYS 358
SPS+ S SP +SP PG SP+SPG Y P SP YSPTSP Y+ SSPG
Sbjct: 200 SPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPG-- 257
Query: 359 PTSPAYSPTSPSYSPTSP 412
SP YSP+SP+YSPTSP
Sbjct: 258 GASPNYSPSSPNYSPTSP 275
Score = 75.9 bits (185), Expect = 1e-12
Identities = 46/105 (43%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Frame = +2
Query: 47 TPGRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+P SP S +P H SPS SP ++SP M+ SS YS
Sbjct: 453 SPKYSPTSPLYSPSSPQH----SPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYS 505
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPG-YSPTSPGYSPTSPTYSPS 343
P+SP Y+P++ YSPTSP YSPT+P YSP SP YSP+SPT+ S
Sbjct: 506 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPKSPAYSPSSPTFEES 550
[160][TOP]
>UniRef100_B4IK28 DNA-directed RNA polymerase n=1 Tax=Drosophila sechellia
RepID=B4IK28_DROSE
Length = 1887
Score = 124 bits (310), Expect = 4e-27
Identities = 79/176 (44%), Positives = 87/176 (49%), Gaps = 56/176 (31%)
Frame = +2
Query: 53 GRSPISGTPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT--SSPGYSPSS 220
G SP S +P H G SP +SP SP+ +SP S +SP YSPSS
Sbjct: 1544 GMSP-SWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 221 PGYSPSSP-------------------GYSPTSPGYSPTSPGYSPT-------------- 301
P YSP+SP GYSP+S GYSPTSPGYSPT
Sbjct: 1603 PNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPGYSPTAQFQSSPSFAGSGS 1662
Query: 302 -------------------SPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP+YSPSSP YSPTSP YSPTSPSYSPTSP
Sbjct: 1663 NIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSP 1718
Score = 122 bits (306), Expect = 1e-26
Identities = 71/132 (53%), Positives = 80/132 (60%), Gaps = 8/132 (6%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG--YSP 214
G +P S S T SP Y SPT Q SP G S SPG YSP
Sbjct: 1630 GYSPSSSGYSPT-------SPGY--------SPTAQFQSSPSFAGSG-SNIYSPGNAYSP 1673
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
SS YSP+SP YSPTSP YSP+SP YSPTSP YSPTSP+YSP+SP Y+P +P+YSPTSP+
Sbjct: 1674 SSSNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPN 1733
Query: 395 ------YSPTSP 412
YSP SP
Sbjct: 1734 YSASPQYSPASP 1745
Score = 106 bits (265), Expect = 7e-22
Identities = 72/153 (47%), Positives = 89/153 (58%), Gaps = 20/153 (13%)
Frame = +2
Query: 14 PSYMD-GLDFGMTPGRSPISGTPYHEGMM----SPSYML-SPNLRLSPTNDAQFSPYVGG 175
PSY ++ +P SP S G+ SP+Y SP+ SP Q++P G
Sbjct: 1725 PSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSP-GSPQYTP--GS 1781
Query: 176 MAFSPTSSPGYSPSSPGYSPSSPGYSP-------------TSPGYSPTSPGYSPTSPGYS 316
+SP +SP YSP+SP YSPSSP +SP TSP YSP YSP+S YS
Sbjct: 1782 PQYSP-ASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYS 1840
Query: 317 PTSPTYSPSSPGYSPTSPAYSPTSPS-YSPTSP 412
PTSPTY+P++ YSPTSP YSPT+PS YSPTSP
Sbjct: 1841 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1873
Score = 104 bits (260), Expect = 3e-21
Identities = 62/119 (52%), Positives = 73/119 (61%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPS------------- 238
SPSY SP Q+SP +SPTS P YSPSSP +SPS
Sbjct: 1765 SPSYDGSPGSPQYTPGSPQYSP--ASPKYSPTS-PLYSPSSPQHSPSNQYSPTGSTYSAT 1821
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSPTSPSYSPTSP 412
SP YSP YSP+S YSPTSP Y+PT+ YSP+SP YSPT+P+ YSPTSP+YSP+SP
Sbjct: 1822 SPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1880
Score = 103 bits (258), Expect = 5e-21
Identities = 66/135 (48%), Positives = 81/135 (60%), Gaps = 13/135 (9%)
Frame = +2
Query: 47 TPGRSPIS---GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
+PG SP + +P G S S + SP SP++ + +SP ++SPTS P YSPS
Sbjct: 1642 SPGYSPTAQFQSSPSFAG--SGSNIYSPGNAYSPSS-SNYSP--NSPSYSPTS-PSYSPS 1695
Query: 218 SPGYSPSSP----------GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTS 367
SP YSP+SP PTSP Y+P +P YSPTSP YS SP YSP+SP YS T
Sbjct: 1696 SPSYSPTSPCYSPTSPSYS---PTSPNYTPVTPSYSPTSPNYS-ASPQYSPASPAYSQTG 1751
Query: 368 PAYSPTSPSYSPTSP 412
YSPTSP+YSP SP
Sbjct: 1752 VKYSPTSPTYSPPSP 1766
Score = 103 bits (257), Expect = 6e-21
Identities = 59/111 (53%), Positives = 72/111 (64%), Gaps = 7/111 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS-----SPGYSPSSPGYSPSSPGYSPTS 262
SPSY SPT+ ++P ++SPTS SP YSP+SP YS + YSPTS
Sbjct: 1710 SPSY--------SPTSP-NYTPVTP--SYSPTSPNYSASPQYSPASPAYSQTGVKYSPTS 1758
Query: 263 PGYSPTSPGY--SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
P YSP SP Y SP SP Y+P SP YSP+SP YSPTSP YSP+SP +SP++
Sbjct: 1759 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN 1809
Score = 99.0 bits (245), Expect = 1e-19
Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPIS-GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY DG +PG + G+P + SP Y SP L + Q SP +SP
Sbjct: 1766 PSY-DG-----SPGSPQYTPGSPQYSPA-SPKY--SPTSPLYSPSSPQHSP---SNQYSP 1813
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTS 367
T S YS +SP YSP+ YSP+S YSPTSP Y+PT+ YSPTSP YSP++P YSPTS
Sbjct: 1814 TGST-YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTS 1872
Query: 368 PAYSPTSPSY 397
PAYSP+SP++
Sbjct: 1873 PAYSPSSPTF 1882
Score = 83.6 bits (205), Expect = 6e-15
Identities = 55/138 (39%), Positives = 69/138 (50%), Gaps = 10/138 (7%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G++ T G S + G G S M P N ++ G ++ P +
Sbjct: 1475 GIEIPNTLGNSMLGGAAMFIGGGSTPSMTPPMTPWVNCNTPRYFSPPGHVSAMTPGGPSF 1534
Query: 209 SPSSPG-YSPSSPGYSPTSPGYSPTSPG-----YSP----TSPGYSPTSPTYSPSSPGYS 358
SPS+ S SP +SP PG SP+SPG Y P SP YSPTSP Y+ SSPG
Sbjct: 1535 SPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPG-- 1592
Query: 359 PTSPAYSPTSPSYSPTSP 412
SP YSP+SP+YSPTSP
Sbjct: 1593 GASPNYSPSSPNYSPTSP 1610
Score = 78.2 bits (191), Expect = 3e-13
Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Frame = +2
Query: 47 TPGRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+P SP S +P H SPS SP ++SP M+ SS YS
Sbjct: 1788 SPKYSPTSPLYSPSSPQH----SPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYS 1840
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPG-YSPTSPGYSPTSPTYSPS 343
P+SP Y+P++ YSPTSP YSPT+P YSPTSP YSP+SPT+ S
Sbjct: 1841 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1885
[161][TOP]
>UniRef100_A2QAT7 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QAT7_ASPNC
Length = 1747
Score = 124 bits (310), Expect = 4e-27
Identities = 74/158 (46%), Positives = 89/158 (56%), Gaps = 30/158 (18%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG----TPYHEGMMSPSYMLSPNLRLSPTNDAQ-------------F 157
G G +P + +G +P+ SP Y SP SPT+ F
Sbjct: 1549 GFGGGFSPAATSPAGYSPSSPFSANPTSPGY--SPTSSYSPTSPGMAITSPRFMSTSPGF 1606
Query: 158 SPYVGGMAFSPTSSPGYSPSSPGY---SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP 328
SP +F+PTS P YSP+SP Y SP+SP YSPTSPG+SPTSP YSPTSP +SP SP
Sbjct: 1607 SP--ASPSFAPTS-PAYSPTSPAYGQASPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASP 1663
Query: 329 TYSPSSPGYSPTSPAY----------SPTSPSYSPTSP 412
+SP+SP YSPTSPA SPTSP Y+PTSP
Sbjct: 1664 AFSPTSPSYSPTSPAVGGVGRHLSPTSPTSPKYTPTSP 1701
Score = 122 bits (305), Expect = 2e-26
Identities = 74/146 (50%), Positives = 89/146 (60%), Gaps = 24/146 (16%)
Frame = +2
Query: 47 TPGRSPISG-TPYHEGMM--SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS------ 196
+PG SP S +P GM SP +M SP + + A SP A+SPTS
Sbjct: 1576 SPGYSPTSSYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSP-----AYSPTSPAYGQA 1630
Query: 197 ---SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY----------S 337
SP YSP+SPG+SP+SP YSPTSP +SP SP +SPTSP YSPTSP S
Sbjct: 1631 SPTSPSYSPTSPGFSPTSPNYSPTSPSFSPASPAFSPTSPSYSPTSPAVGGVGRHLSPTS 1690
Query: 338 PSSPGYSPTSPAYSPTSP-SYSPTSP 412
P+SP Y+PTSP +SPTSP +YSPTSP
Sbjct: 1691 PTSPKYTPTSPGWSPTSPQTYSPTSP 1716
Score = 102 bits (254), Expect = 1e-20
Identities = 66/144 (45%), Positives = 78/144 (54%), Gaps = 18/144 (12%)
Frame = +2
Query: 35 DFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVG-GMAFSPTSSPGYS 211
D G S GTP E SP +P ++ P G G FSP ++
Sbjct: 1507 DTGSPMQESAYIGTPDPESNFSPIRQAGAE---TPGGFTEYQPTGGFGGGFSPAAT---- 1559
Query: 212 PSSPGYSPSSP-GYSPTSPGYSP-------------TSPGYSPTSPGYSPTSPTYSPSSP 349
S GYSPSSP +PTSPGYSP TSP + TSPG+SP SP+++P+SP
Sbjct: 1560 -SPAGYSPSSPFSANPTSPGYSPTSSYSPTSPGMAITSPRFMSTSPGFSPASPSFAPTSP 1618
Query: 350 GYSPTSPAY---SPTSPSYSPTSP 412
YSPTSPAY SPTSPSYSPTSP
Sbjct: 1619 AYSPTSPAYGQASPTSPSYSPTSP 1642
Score = 79.3 bits (194), Expect = 1e-13
Identities = 52/108 (48%), Positives = 66/108 (61%), Gaps = 14/108 (12%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMA--FSPTS--SPGYS 211
+PG SP S + SPS+ SP + + + SP VGG+ SPTS SP Y+
Sbjct: 1641 SPGFSPTSP---NYSPTSPSFSPASPAFSPTSPSYSPTSPAVGGVGRHLSPTSPTSPKYT 1697
Query: 212 PSSPGYSPSSPG-YSPTSPGYS--------PTSPGYSPTSPGYSPTSP 328
P+SPG+SP+SP YSPTSP ++ PTSPGYSPTSP +SPTSP
Sbjct: 1698 PTSPGWSPTSPQTYSPTSPNFAGSPTSPGGPTSPGYSPTSPAFSPTSP 1745
[162][TOP]
>UniRef100_B3MQ29 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
RepID=B3MQ29_DROAN
Length = 1889
Score = 123 bits (309), Expect = 6e-27
Identities = 63/101 (62%), Positives = 73/101 (72%), Gaps = 8/101 (7%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPG--YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSP 307
SPT++ Q SP G S SPG YSPSS YSP+SP YSPTSP YSP+SP YSPTSP
Sbjct: 1648 SPTSNYQSSPSFAGSG-SNMYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSP 1706
Query: 308 GYSPTSPTYSPSSPGYSPTSPAYSPTSPS------YSPTSP 412
YSPTSP+YSP+SP Y+P +P+YSPTSP+ YSP SP
Sbjct: 1707 CYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASP 1747
Score = 119 bits (299), Expect = 8e-26
Identities = 65/107 (60%), Positives = 73/107 (68%)
Frame = +2
Query: 92 MMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY 271
M SP SP S +N + SP ++SPT SP YSPSSP YSP+SP YSPTSP Y
Sbjct: 1666 MYSPGNAYSP----SSSNYSPNSP-----SYSPT-SPSYSPSSPSYSPTSPCYSPTSPSY 1715
Query: 272 SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSP Y+P +P YSPTSP YS +SP YSP SPAYS T YSPTSP
Sbjct: 1716 SPTSPNYTPVTPSYSPTSPNYS-ASPHYSPASPAYSQTGVKYSPTSP 1761
Score = 112 bits (280), Expect = 1e-23
Identities = 69/158 (43%), Positives = 87/158 (55%), Gaps = 37/158 (23%)
Frame = +2
Query: 50 PGRSPISGTPYHEGMMSPSYMLSPNLR--LSPTNDAQFSPYVGGMA--FSPTSSPGYSPS 217
PG SP S P MSP + SP++ SPT+ + GG + +SP SSP YSP+
Sbjct: 1554 PGSSPSSPGP----SMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSP-SSPNYSPT 1608
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP----------------------- 328
SP Y+ +SP Y+ T+P ++P S GYSP+S GYSPTSP
Sbjct: 1609 SPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNYQSSPSFAGSGSNMYS 1668
Query: 329 ----------TYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSPTSP+YSP+SPSYSPTSP
Sbjct: 1669 PGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSP 1706
Score = 108 bits (271), Expect = 1e-22
Identities = 69/135 (51%), Positives = 82/135 (60%), Gaps = 15/135 (11%)
Frame = +2
Query: 53 GRSPISG--TPYHEGMMSPSY------MLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G SP S +P SPS+ M SP SP++ + +SP ++SPTS P Y
Sbjct: 1639 GYSPTSPVYSPTSNYQSSPSFAGSGSNMYSPGNAYSPSS-SNYSP--NSPSYSPTS-PSY 1694
Query: 209 SPSSP---G----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTS 367
SPSSP YSP+SP YSPTSP Y+P +P YSPTSP YS SP YSP+SP YS T
Sbjct: 1695 SPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPHYSPASPAYSQTG 1753
Query: 368 PAYSPTSPSYSPTSP 412
YSPTSP+YSP SP
Sbjct: 1754 VKYSPTSPTYSPPSP 1768
Score = 107 bits (266), Expect = 5e-22
Identities = 69/154 (44%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Frame = +2
Query: 44 MTPGRSPIS---GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
+TP SP S H SP+Y + ++ SPT+ +SP SP SP Y+P
Sbjct: 1725 VTPSYSPTSPNYSASPHYSPASPAYSQT-GVKYSPTSPT-YSPPSPSYDGSP-GSPQYTP 1781
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPG---------------------------YSPTSPGY 313
SP YSP+SP YSPTSP YSP+SP YSP+S Y
Sbjct: 1782 GSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKY 1841
Query: 314 SPTSPTYSPSSPGYSPTSPAYSPTSPS-YSPTSP 412
SPTSPTY+P++ YSPTSP YSPT+PS YSPTSP
Sbjct: 1842 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Score = 104 bits (260), Expect = 3e-21
Identities = 62/119 (52%), Positives = 73/119 (61%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPS------------- 238
SPSY SP Q+SP +SPTS P YSPSSP +SPS
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSP--ASPKYSPTS-PLYSPSSPQHSPSNQYSPTGSTYSAT 1823
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSPTSPSYSPTSP 412
SP YSP YSP+S YSPTSP Y+PT+ YSP+SP YSPT+P+ YSPTSP+YSP+SP
Sbjct: 1824 SPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 103 bits (258), Expect = 5e-21
Identities = 62/126 (49%), Positives = 73/126 (57%), Gaps = 7/126 (5%)
Frame = +2
Query: 53 GRSPISGTPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
G SP S +P H G SP +SP SP+ +SP +SP Y+ SSPG
Sbjct: 1544 GMSP-SWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSP----------TSPNYTASSPG 1592
Query: 227 -----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
YSPSSP YSPTSP Y+ TSP Y+ T+P ++P S YSPSS GYSPTSP YSPTS
Sbjct: 1593 GASPNYSPSSPNYSPTSPLYATTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSN 1652
Query: 392 SYSPTS 409
S S
Sbjct: 1653 YQSSPS 1658
Score = 103 bits (257), Expect = 6e-21
Identities = 59/111 (53%), Positives = 72/111 (64%), Gaps = 7/111 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS-----SPGYSPSSPGYSPSSPGYSPTS 262
SPSY SPT+ ++P ++SPTS SP YSP+SP YS + YSPTS
Sbjct: 1712 SPSY--------SPTSP-NYTPVTP--SYSPTSPNYSASPHYSPASPAYSQTGVKYSPTS 1760
Query: 263 PGYSPTSPGY--SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
P YSP SP Y SP SP Y+P SP YSP+SP YSPTSP YSP+SP +SP++
Sbjct: 1761 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN 1811
Score = 99.0 bits (245), Expect = 1e-19
Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPIS-GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY DG +PG + G+P + SP Y SP L + Q SP +SP
Sbjct: 1768 PSY-DG-----SPGSPQYTPGSPQYSPA-SPKY--SPTSPLYSPSSPQHSP---SNQYSP 1815
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTS 367
T S YS +SP YSP+ YSP+S YSPTSP Y+PT+ YSPTSP YSP++P YSPTS
Sbjct: 1816 TGST-YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTS 1874
Query: 368 PAYSPTSPSY 397
PAYSP+SP++
Sbjct: 1875 PAYSPSSPTF 1884
Score = 86.3 bits (212), Expect = 1e-15
Identities = 57/143 (39%), Positives = 71/143 (49%), Gaps = 15/143 (10%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G++ T G S + G G S M P N ++ G ++ P +
Sbjct: 1475 GIEIPNTLGSSMLGGAAMFIGGGSTPSMTPPMTPWVNCNTPRYFSPPGHVSAMTPGGPSF 1534
Query: 209 SPSSPG-YSPSSPGYSPTSPGYSPTSPG-----YSP----TSPGYSPTSPTYSPSSPG-- 352
SPS+ S SP +SP PG SP+SPG Y P SP YSPTSP Y+ SSPG
Sbjct: 1535 SPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGA 1594
Query: 353 ---YSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSPTSP Y+ TSP
Sbjct: 1595 SPNYSPSSPNYSPTSPLYATTSP 1617
Score = 78.2 bits (191), Expect = 3e-13
Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Frame = +2
Query: 47 TPGRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+P SP S +P H SPS SP ++SP M+ SS YS
Sbjct: 1790 SPKYSPTSPLYSPSSPQH----SPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYS 1842
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPG-YSPTSPGYSPTSPTYSPS 343
P+SP Y+P++ YSPTSP YSPT+P YSPTSP YSP+SPT+ S
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[163][TOP]
>UniRef100_B4PY98 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
RepID=B4PY98_DROYA
Length = 1889
Score = 123 bits (308), Expect = 7e-27
Identities = 67/130 (51%), Positives = 82/130 (63%), Gaps = 6/130 (4%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
G +P S S T SP Y +PN + SP+ G +SP ++ YSPSS
Sbjct: 1632 GYSPSSSGYSPT-------SPVYSPTPNFQSSPSFAGS-----GSNIYSPGNA--YSPSS 1677
Query: 221 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-- 394
YSP+SP YSPTSP YSP+SP YSPTSP YSPTSP+YSP+SP Y+P +P+YSPTSP+
Sbjct: 1678 SNYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS 1737
Query: 395 ----YSPTSP 412
YSP SP
Sbjct: 1738 ASPHYSPASP 1747
Score = 107 bits (267), Expect = 4e-22
Identities = 60/127 (47%), Positives = 75/127 (59%), Gaps = 6/127 (4%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGM-MSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
MTPG S + + MSPS+ + + SPY SP+ SP YSP+S
Sbjct: 1527 MTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPA---SPSVSPSYSPTS 1583
Query: 221 PGYSPSSPG-----YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
P Y+ SSPG YSP+SP YSPTSP Y+ SP Y+ T+P ++P S GYSP+S YSPT
Sbjct: 1584 PNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSSGYSPT 1643
Query: 386 SPSYSPT 406
SP YSPT
Sbjct: 1644 SPVYSPT 1650
Score = 107 bits (266), Expect = 5e-22
Identities = 69/154 (44%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Frame = +2
Query: 44 MTPGRSPIS---GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
+TP SP S H SP+Y + ++ SPT+ +SP SP SP Y+P
Sbjct: 1725 VTPSYSPTSPNYSASPHYSPASPAYSQT-GVKYSPTSPT-YSPPSPSYDGSP-GSPQYTP 1781
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPG---------------------------YSPTSPGY 313
SP YSP+SP YSPTSP YSP+SP YSP+S Y
Sbjct: 1782 GSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKY 1841
Query: 314 SPTSPTYSPSSPGYSPTSPAYSPTSPS-YSPTSP 412
SPTSPTY+P++ YSPTSP YSPT+PS YSPTSP
Sbjct: 1842 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Score = 104 bits (260), Expect = 3e-21
Identities = 62/119 (52%), Positives = 73/119 (61%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPS------------- 238
SPSY SP Q+SP +SPTS P YSPSSP +SPS
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSP--ASPKYSPTS-PLYSPSSPQHSPSNQYSPTGSTYSAT 1823
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSPTSPSYSPTSP 412
SP YSP YSP+S YSPTSP Y+PT+ YSP+SP YSPT+P+ YSPTSP+YSP+SP
Sbjct: 1824 SPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 103 bits (257), Expect = 6e-21
Identities = 59/111 (53%), Positives = 72/111 (64%), Gaps = 7/111 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS-----SPGYSPSSPGYSPSSPGYSPTS 262
SPSY SPT+ ++P ++SPTS SP YSP+SP YS + YSPTS
Sbjct: 1712 SPSY--------SPTSP-NYTPVTP--SYSPTSPNYSASPHYSPASPAYSQTGVKYSPTS 1760
Query: 263 PGYSPTSPGY--SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
P YSP SP Y SP SP Y+P SP YSP+SP YSPTSP YSP+SP +SP++
Sbjct: 1761 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN 1811
Score = 102 bits (253), Expect = 2e-20
Identities = 67/160 (41%), Positives = 78/160 (48%), Gaps = 40/160 (25%)
Frame = +2
Query: 53 GRSPISGTPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
G SP S +P H G SP +SP SP+ +SP +SP Y+ SSPG
Sbjct: 1544 GMSP-SWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSP----------TSPNYTASSPG 1592
Query: 227 -----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT-- 385
YSPSSP YSPTSP Y+ SP Y+ T+P ++P S YSPSS GYSPTSP YSPT
Sbjct: 1593 GASPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTPN 1652
Query: 386 -------------------------------SPSYSPTSP 412
SPSYSPTSP
Sbjct: 1653 FQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNSPSYSPTSP 1692
Score = 99.0 bits (245), Expect = 1e-19
Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPIS-GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY DG +PG + G+P + SP Y SP L + Q SP +SP
Sbjct: 1768 PSY-DG-----SPGSPQYTPGSPQYSPA-SPKY--SPTSPLYSPSSPQHSP---SNQYSP 1815
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTS 367
T S YS +SP YSP+ YSP+S YSPTSP Y+PT+ YSPTSP YSP++P YSPTS
Sbjct: 1816 TGST-YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTS 1874
Query: 368 PAYSPTSPSY 397
PAYSP+SP++
Sbjct: 1875 PAYSPSSPTF 1884
Score = 78.2 bits (191), Expect = 3e-13
Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Frame = +2
Query: 47 TPGRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+P SP S +P H SPS SP ++SP M+ SS YS
Sbjct: 1790 SPKYSPTSPLYSPSSPQH----SPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYS 1842
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPG-YSPTSPGYSPTSPTYSPS 343
P+SP Y+P++ YSPTSP YSPT+P YSPTSP YSP+SPT+ S
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[164][TOP]
>UniRef100_B6QAY2 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224
RepID=B6QAY2_PENMQ
Length = 1744
Score = 123 bits (308), Expect = 7e-27
Identities = 62/120 (51%), Positives = 80/120 (66%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYS 232
G SP S P++ +SP Y S + S N + SP ++SPG+SP SP ++
Sbjct: 1564 GYSPTS--PFNTSPVSPGYSPSSSYSPSSPNMSVTSPRF------MSTSPGFSPQSPAFA 1615
Query: 233 PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSPTSP + TSP YSPTSP +SP+SP YSPSSP +SP SPA+SP+SP+YSPTSP
Sbjct: 1616 ITSPAYSPTSPSFQATSPSYSPTSPRFSPSSPNYSPSSPNFSPASPAFSPSSPTYSPTSP 1675
Score = 96.7 bits (239), Expect = 7e-19
Identities = 65/148 (43%), Positives = 80/148 (54%), Gaps = 33/148 (22%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+PG SP S + SP+Y SP+ + + + + SP FSP SSP YSPSSP
Sbjct: 1604 SPGFSPQSPA---FAITSPAYSPTSPSFQATSPSYSPTSP-----RFSP-SSPNYSPSSP 1654
Query: 224 GYSPSSPGYSPTSPGYSPTSPG---------------YSPTSPGYSPTSPT-YSPSSPG- 352
+SP+SP +SP+SP YSPTSP YSP SPG+SPTSP YSP+SP
Sbjct: 1655 NFSPASPAFSPSSPTYSPTSPAIGGRQFSPSSPSSPKYSPASPGWSPTSPEIYSPTSPNI 1714
Query: 353 ---------------YSPTSPAYSPTSP 391
YSPTSP Y+PTSP
Sbjct: 1715 HGSPTSPARGATSPSYSPTSPQYNPTSP 1742
[165][TOP]
>UniRef100_B4NDK9 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
RepID=B4NDK9_DROWI
Length = 1890
Score = 122 bits (306), Expect = 1e-26
Identities = 62/101 (61%), Positives = 73/101 (72%), Gaps = 8/101 (7%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPG--YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSP 307
SPT++ Q SP G S SPG YSPSS Y+P+SP YSPTSP YSP+SP YSPTSP
Sbjct: 1649 SPTSNFQSSPSFAGSG-SNMYSPGNAYSPSSSNYTPNSPSYSPTSPSYSPSSPSYSPTSP 1707
Query: 308 GYSPTSPTYSPSSPGYSPTSPAYSPTSPS------YSPTSP 412
YSPTSP+YSP+SP Y+P +P+YSPTSP+ YSP SP
Sbjct: 1708 CYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASP 1748
Score = 119 bits (298), Expect = 1e-25
Identities = 65/107 (60%), Positives = 72/107 (67%)
Frame = +2
Query: 92 MMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY 271
M SP SP S +N SP ++SPT SP YSPSSP YSP+SP YSPTSP Y
Sbjct: 1667 MYSPGNAYSP----SSSNYTPNSP-----SYSPT-SPSYSPSSPSYSPTSPCYSPTSPSY 1716
Query: 272 SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSP Y+P +P YSPTSP YS +SP YSP SPAYS T YSPTSP
Sbjct: 1717 SPTSPNYTPVTPSYSPTSPNYS-ASPHYSPASPAYSQTGVKYSPTSP 1762
Score = 112 bits (280), Expect = 1e-23
Identities = 72/165 (43%), Positives = 84/165 (50%), Gaps = 45/165 (27%)
Frame = +2
Query: 53 GRSPISGTPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS---SPGYSPS 217
G SP S +P H G SP +SP SP+ +SP S S SP YSPS
Sbjct: 1544 GMSP-SWSPAHPGSSPSSPGPSMSPYFPTSPSVSPSYSPTSPNYTASSPSGGASPNYSPS 1602
Query: 218 SPGYSPSSPGYSPTSPGYSPTSP-------GYSPTSPGYSPTSPTYS------------- 337
SP YSP+SP Y+ TSP Y+ T+P GYSP+S GYSPTSP YS
Sbjct: 1603 SPNYSPTSPLYAATSPRYASTTPNFNLQSTGYSPSSSGYSPTSPVYSPTSNFQSSPSFAG 1662
Query: 338 --------------------PSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSPTSP+YSP+SPSYSPTSP
Sbjct: 1663 SGSNMYSPGNAYSPSSSNYTPNSPSYSPTSPSYSPSSPSYSPTSP 1707
Score = 107 bits (266), Expect = 5e-22
Identities = 69/154 (44%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Frame = +2
Query: 44 MTPGRSPIS---GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
+TP SP S H SP+Y + ++ SPT+ +SP SP SP Y+P
Sbjct: 1726 VTPSYSPTSPNYSASPHYSPASPAYSQT-GVKYSPTSPT-YSPPSPSYDGSP-GSPQYTP 1782
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPG---------------------------YSPTSPGY 313
SP YSP+SP YSPTSP YSP+SP YSP+S Y
Sbjct: 1783 GSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKY 1842
Query: 314 SPTSPTYSPSSPGYSPTSPAYSPTSPS-YSPTSP 412
SPTSPTY+P++ YSPTSP YSPT+PS YSPTSP
Sbjct: 1843 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1876
Score = 105 bits (261), Expect = 2e-21
Identities = 63/133 (47%), Positives = 74/133 (55%), Gaps = 12/133 (9%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGM-----AFSPTS----- 196
TP S T SPSY SP +SP ++SPTS
Sbjct: 1682 TPNSPSYSPTSPSYSPSSPSY--SPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSA 1739
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGY--SPTSPGYSPTSPTYSPSSPGYSPTSP 370
SP YSP+SP YS + YSPTSP YSP SP Y SP SP Y+P SP YSP+SP YSPTSP
Sbjct: 1740 SPHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSP 1799
Query: 371 AYSPTSPSYSPTS 409
YSP+SP +SP++
Sbjct: 1800 LYSPSSPQHSPSN 1812
Score = 104 bits (260), Expect = 3e-21
Identities = 62/119 (52%), Positives = 73/119 (61%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPS------------- 238
SPSY SP Q+SP +SPTS P YSPSSP +SPS
Sbjct: 1768 SPSYDGSPGSPQYTPGSPQYSP--ASPKYSPTS-PLYSPSSPQHSPSNQYSPTGSTYSAT 1824
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSPTSPSYSPTSP 412
SP YSP YSP+S YSPTSP Y+PT+ YSP+SP YSPT+P+ YSPTSP+YSP+SP
Sbjct: 1825 SPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1883
Score = 99.0 bits (245), Expect = 1e-19
Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPIS-GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY DG +PG + G+P + SP Y SP L + Q SP +SP
Sbjct: 1769 PSY-DG-----SPGSPQYTPGSPQYSPA-SPKY--SPTSPLYSPSSPQHSP---SNQYSP 1816
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTS 367
T S YS +SP YSP+ YSP+S YSPTSP Y+PT+ YSPTSP YSP++P YSPTS
Sbjct: 1817 TGST-YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTS 1875
Query: 368 PAYSPTSPSY 397
PAYSP+SP++
Sbjct: 1876 PAYSPSSPTF 1885
Score = 97.8 bits (242), Expect = 3e-19
Identities = 62/136 (45%), Positives = 73/136 (53%), Gaps = 14/136 (10%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGM-MSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
MTPG S + MSPS+ + + SPY SP+ SP YSP+S
Sbjct: 1527 MTPGGPSFSPAAASDASGMSPSWSPAHPGSSPSSPGPSMSPY---FPTSPSVSPSYSPTS 1583
Query: 221 PGYSPSSPG------YSPTSPGYSPTSPGYSPTSPGYSPTSPT-------YSPSSPGYSP 361
P Y+ SSP YSP+SP YSPTSP Y+ TSP Y+ T+P YSPSS GYSP
Sbjct: 1584 PNYTASSPSGGASPNYSPSSPNYSPTSPLYAATSPRYASTTPNFNLQSTGYSPSSSGYSP 1643
Query: 362 TSPAYSPTSPSYSPTS 409
TSP YSPTS S S
Sbjct: 1644 TSPVYSPTSNFQSSPS 1659
Score = 82.4 bits (202), Expect = 1e-14
Identities = 58/145 (40%), Positives = 73/145 (50%), Gaps = 17/145 (11%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQ-FSPYVGGMAFSPTSSPG 205
G++ T G + + G G S M P N + FSP + +P P
Sbjct: 1475 GIEIPNTLGSAMMGGAAMFIGGGSTPSMTPPMTPWVNCNTPRYFSPQGHASSMTP-GGPS 1533
Query: 206 YSPSSPG-YSPSSPGYSPTSPGYSPTSPG-----YSPT----SPGYSPTSPTYSPS---- 343
+SP++ S SP +SP PG SP+SPG Y PT SP YSPTSP Y+ S
Sbjct: 1534 FSPAAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPTSPSVSPSYSPTSPNYTASSPSG 1593
Query: 344 --SPGYSPTSPAYSPTSPSYSPTSP 412
SP YSP+SP YSPTSP Y+ TSP
Sbjct: 1594 GASPNYSPSSPNYSPTSPLYAATSP 1618
Score = 78.2 bits (191), Expect = 3e-13
Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Frame = +2
Query: 47 TPGRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+P SP S +P H SPS SP ++SP M+ SS YS
Sbjct: 1791 SPKYSPTSPLYSPSSPQH----SPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYS 1843
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPG-YSPTSPGYSPTSPTYSPS 343
P+SP Y+P++ YSPTSP YSPT+P YSPTSP YSP+SPT+ S
Sbjct: 1844 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1888
[166][TOP]
>UniRef100_Q9XZU8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drosophila
pseudoobscura pseudoobscura RepID=Q9XZU8_DROPS
Length = 1811
Score = 122 bits (305), Expect = 2e-26
Identities = 71/129 (55%), Positives = 79/129 (61%), Gaps = 7/129 (5%)
Frame = +2
Query: 47 TPGRSPISGTPYH-------EGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
+P SP S P M SP SP S TN + SP ++SPT SP
Sbjct: 1566 SPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSP----SSTNYSPNSP-----SYSPT-SPS 1615
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
YSPSSP YSP+SP YSPTSP YSPTSP Y+P +P YSPTSP YS +SP YSP SPAYS T
Sbjct: 1616 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYS-ASPHYSPASPAYSQT 1674
Query: 386 SPSYSPTSP 412
YSPTSP
Sbjct: 1675 GAKYSPTSP 1683
Score = 105 bits (263), Expect = 1e-21
Identities = 69/153 (45%), Positives = 82/153 (53%), Gaps = 31/153 (20%)
Frame = +2
Query: 47 TPGRSPIS---GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
TP SP S H SP+Y + + SPT+ +SP SP SP Y+P
Sbjct: 1648 TPSYSPTSPNYSASPHYSPASPAYSQT-GAKYSPTSPT-YSPPSPSYDGSP-GSPQYTPG 1704
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPG---------------------------YSPTSPGYS 316
SP YSP+SP YSPTSP YSP+SP YSP+S YS
Sbjct: 1705 SPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYS 1764
Query: 317 PTSPTYSPSSPGYSPTSPAYSPTSPS-YSPTSP 412
PTSPTY+P++ YSPTSP YSPT+PS YSPTSP
Sbjct: 1765 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1797
Score = 104 bits (260), Expect = 3e-21
Identities = 62/119 (52%), Positives = 73/119 (61%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPS------------- 238
SPSY SP Q+SP +SPTS P YSPSSP +SPS
Sbjct: 1689 SPSYDGSPGSPQYTPGSPQYSP--ASPKYSPTS-PLYSPSSPQHSPSNQYSPTGSTYSAT 1745
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSPTSPSYSPTSP 412
SP YSP YSP+S YSPTSP Y+PT+ YSP+SP YSPT+P+ YSPTSP+YSP+SP
Sbjct: 1746 SPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1804
Score = 103 bits (258), Expect = 5e-21
Identities = 62/133 (46%), Positives = 74/133 (55%), Gaps = 12/133 (9%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGM-----AFSPTS----- 196
+P S T SPSY SP +SP ++SPTS
Sbjct: 1603 SPNSPSYSPTSPSYSPSSPSY--SPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSA 1660
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGY--SPTSPGYSPTSPTYSPSSPGYSPTSP 370
SP YSP+SP YS + YSPTSP YSP SP Y SP SP Y+P SP YSP+SP YSPTSP
Sbjct: 1661 SPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSP 1720
Query: 371 AYSPTSPSYSPTS 409
YSP+SP +SP++
Sbjct: 1721 LYSPSSPQHSPSN 1733
Score = 101 bits (251), Expect = 3e-20
Identities = 61/127 (48%), Positives = 75/127 (59%), Gaps = 7/127 (5%)
Frame = +2
Query: 53 GRSPISGTPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
G SP S +P H G SP+ +SP SP+ +SP +SP Y+ SSPG
Sbjct: 1466 GMSP-SWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSP----------TSPNYTASSPG 1514
Query: 227 -----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
YSPSSP YSPTSP Y+ SP Y+ T+P ++P S YSPS+ GYSPTSP YSPT
Sbjct: 1515 GASPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPT-- 1572
Query: 392 SYSPTSP 412
S P+SP
Sbjct: 1573 SNFPSSP 1579
Score = 99.0 bits (245), Expect = 1e-19
Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPIS-GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY DG +PG + G+P + SP Y SP L + Q SP +SP
Sbjct: 1690 PSY-DG-----SPGSPQYTPGSPQYSPA-SPKY--SPTSPLYSPSSPQHSP---SNQYSP 1737
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTS 367
T S YS +SP YSP+ YSP+S YSPTSP Y+PT+ YSPTSP YSP++P YSPTS
Sbjct: 1738 TGST-YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTS 1796
Query: 368 PAYSPTSPSY 397
PAYSP+SP++
Sbjct: 1797 PAYSPSSPTF 1806
Score = 84.0 bits (206), Expect = 5e-15
Identities = 56/143 (39%), Positives = 70/143 (48%), Gaps = 15/143 (10%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G++ T G S + GT G S M P N ++ G ++ P +
Sbjct: 1397 GIEIPNTLGSSMLGGTAMFIGGGSTPSMTPPMTPWVNCNTPRYFSPPGHVSAMTPGGPSF 1456
Query: 209 SPSSPG-YSPSSPGYSPTSPGYSPTSPG-----YSP----TSPGYSPTSPTYSPSSPG-- 352
SPS+ S SP +SP PG SP+SP Y P SP YSPTSP Y+ SSPG
Sbjct: 1457 SPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSPNYTASSPGGA 1516
Query: 353 ---YSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSPTSP Y+ SP
Sbjct: 1517 SPNYSPSSPNYSPTSPLYAAASP 1539
Score = 78.2 bits (191), Expect = 3e-13
Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Frame = +2
Query: 47 TPGRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+P SP S +P H SPS SP ++SP M+ SS YS
Sbjct: 1712 SPKYSPTSPLYSPSSPQH----SPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYS 1764
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPG-YSPTSPGYSPTSPTYSPS 343
P+SP Y+P++ YSPTSP YSPT+P YSPTSP YSP+SPT+ S
Sbjct: 1765 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1809
[167][TOP]
>UniRef100_Q9XZS1 DNA-directed RNA polymerase n=1 Tax=Drosophila guanche
RepID=Q9XZS1_DROGU
Length = 1889
Score = 122 bits (305), Expect = 2e-26
Identities = 71/129 (55%), Positives = 79/129 (61%), Gaps = 7/129 (5%)
Frame = +2
Query: 47 TPGRSPISGTPYH-------EGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
+P SP S P M SP SP S TN + SP ++SPT SP
Sbjct: 1644 SPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSP----SSTNYSPNSP-----SYSPT-SPS 1693
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
YSPSSP YSP+SP YSPTSP YSPTSP Y+P +P YSPTSP YS +SP YSP SPAYS T
Sbjct: 1694 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYS-ASPHYSPASPAYSQT 1752
Query: 386 SPSYSPTSP 412
YSPTSP
Sbjct: 1753 GAKYSPTSP 1761
Score = 105 bits (263), Expect = 1e-21
Identities = 69/153 (45%), Positives = 82/153 (53%), Gaps = 31/153 (20%)
Frame = +2
Query: 47 TPGRSPIS---GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
TP SP S H SP+Y + + SPT+ +SP SP SP Y+P
Sbjct: 1726 TPSYSPTSPNYSASPHYSPASPAYSQT-GAKYSPTSPT-YSPPSPSYDGSP-GSPQYTPG 1782
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPG---------------------------YSPTSPGYS 316
SP YSP+SP YSPTSP YSP+SP YSP+S YS
Sbjct: 1783 SPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYS 1842
Query: 317 PTSPTYSPSSPGYSPTSPAYSPTSPS-YSPTSP 412
PTSPTY+P++ YSPTSP YSPT+PS YSPTSP
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Score = 104 bits (260), Expect = 3e-21
Identities = 62/119 (52%), Positives = 73/119 (61%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPS------------- 238
SPSY SP Q+SP +SPTS P YSPSSP +SPS
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSP--ASPKYSPTS-PLYSPSSPQHSPSNQYSPTGSTYSAT 1823
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSPTSPSYSPTSP 412
SP YSP YSP+S YSPTSP Y+PT+ YSP+SP YSPT+P+ YSPTSP+YSP+SP
Sbjct: 1824 SPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 103 bits (258), Expect = 5e-21
Identities = 62/133 (46%), Positives = 74/133 (55%), Gaps = 12/133 (9%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGM-----AFSPTS----- 196
+P S T SPSY SP +SP ++SPTS
Sbjct: 1681 SPNSPSYSPTSPSYSPSSPSY--SPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSA 1738
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGY--SPTSPGYSPTSPTYSPSSPGYSPTSP 370
SP YSP+SP YS + YSPTSP YSP SP Y SP SP Y+P SP YSP+SP YSPTSP
Sbjct: 1739 SPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSP 1798
Query: 371 AYSPTSPSYSPTS 409
YSP+SP +SP++
Sbjct: 1799 LYSPSSPQHSPSN 1811
Score = 100 bits (250), Expect = 4e-20
Identities = 61/127 (48%), Positives = 75/127 (59%), Gaps = 7/127 (5%)
Frame = +2
Query: 53 GRSPISGTPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
G SP S +P H G SP+ +SP SP+ +SP +SP Y+ SSPG
Sbjct: 1544 GMSP-SWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSP----------TSPNYTASSPG 1592
Query: 227 -----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
YSPSSP YSPTSP Y+ SP Y+ T+P ++P S YSPS+ GYSPTSP YSPT
Sbjct: 1593 GASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPT-- 1650
Query: 392 SYSPTSP 412
S P+SP
Sbjct: 1651 SNFPSSP 1657
Score = 99.0 bits (245), Expect = 1e-19
Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPIS-GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY DG +PG + G+P + SP Y SP L + Q SP +SP
Sbjct: 1768 PSY-DG-----SPGSPQYTPGSPQYSPA-SPKY--SPTSPLYSPSSPQHSP---SNQYSP 1815
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTS 367
T S YS +SP YSP+ YSP+S YSPTSP Y+PT+ YSPTSP YSP++P YSPTS
Sbjct: 1816 TGST-YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTS 1874
Query: 368 PAYSPTSPSY 397
PAYSP+SP++
Sbjct: 1875 PAYSPSSPTF 1884
Score = 83.6 bits (205), Expect = 6e-15
Identities = 56/143 (39%), Positives = 70/143 (48%), Gaps = 15/143 (10%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G++ T G S + GT G S M P N ++ G ++ P +
Sbjct: 1475 GIEIPNTLGSSMLGGTAMFIGGGSTPSMTPPMTPWVNCNTPRYFSPPGHVSAMTPGGPSF 1534
Query: 209 SPSSPG-YSPSSPGYSPTSPGYSPTSPG-----YSP----TSPGYSPTSPTYSPSSPG-- 352
SPS+ S SP +SP PG SP+SP Y P SP YSPTSP Y+ SSPG
Sbjct: 1535 SPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSPNYTASSPGGA 1594
Query: 353 ---YSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSPTSP Y+ SP
Sbjct: 1595 SPNYSPSSPNYSPTSPLYAAPSP 1617
Score = 78.2 bits (191), Expect = 3e-13
Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Frame = +2
Query: 47 TPGRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+P SP S +P H SPS SP ++SP M+ SS YS
Sbjct: 1790 SPKYSPTSPLYSPSSPQH----SPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYS 1842
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPG-YSPTSPGYSPTSPTYSPS 343
P+SP Y+P++ YSPTSP YSPT+P YSPTSP YSP+SPT+ S
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[168][TOP]
>UniRef100_Q29IN2 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
pseudoobscura RepID=Q29IN2_DROPS
Length = 1889
Score = 122 bits (305), Expect = 2e-26
Identities = 71/129 (55%), Positives = 79/129 (61%), Gaps = 7/129 (5%)
Frame = +2
Query: 47 TPGRSPISGTPYH-------EGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
+P SP S P M SP SP S TN + SP ++SPT SP
Sbjct: 1644 SPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSP----SSTNYSPNSP-----SYSPT-SPS 1693
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
YSPSSP YSP+SP YSPTSP YSPTSP Y+P +P YSPTSP YS +SP YSP SPAYS T
Sbjct: 1694 YSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYS-ASPHYSPASPAYSQT 1752
Query: 386 SPSYSPTSP 412
YSPTSP
Sbjct: 1753 GAKYSPTSP 1761
Score = 105 bits (263), Expect = 1e-21
Identities = 69/153 (45%), Positives = 82/153 (53%), Gaps = 31/153 (20%)
Frame = +2
Query: 47 TPGRSPIS---GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
TP SP S H SP+Y + + SPT+ +SP SP SP Y+P
Sbjct: 1726 TPSYSPTSPNYSASPHYSPASPAYSQT-GAKYSPTSPT-YSPPSPSYDGSP-GSPQYTPG 1782
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPG---------------------------YSPTSPGYS 316
SP YSP+SP YSPTSP YSP+SP YSP+S YS
Sbjct: 1783 SPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYS 1842
Query: 317 PTSPTYSPSSPGYSPTSPAYSPTSPS-YSPTSP 412
PTSPTY+P++ YSPTSP YSPT+PS YSPTSP
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Score = 104 bits (260), Expect = 3e-21
Identities = 62/119 (52%), Positives = 73/119 (61%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPS------------- 238
SPSY SP Q+SP +SPTS P YSPSSP +SPS
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSP--ASPKYSPTS-PLYSPSSPQHSPSNQYSPTGSTYSAT 1823
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSPTSPSYSPTSP 412
SP YSP YSP+S YSPTSP Y+PT+ YSP+SP YSPT+P+ YSPTSP+YSP+SP
Sbjct: 1824 SPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 103 bits (258), Expect = 5e-21
Identities = 62/133 (46%), Positives = 74/133 (55%), Gaps = 12/133 (9%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGM-----AFSPTS----- 196
+P S T SPSY SP +SP ++SPTS
Sbjct: 1681 SPNSPSYSPTSPSYSPSSPSY--SPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSA 1738
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGY--SPTSPGYSPTSPTYSPSSPGYSPTSP 370
SP YSP+SP YS + YSPTSP YSP SP Y SP SP Y+P SP YSP+SP YSPTSP
Sbjct: 1739 SPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSP 1798
Query: 371 AYSPTSPSYSPTS 409
YSP+SP +SP++
Sbjct: 1799 LYSPSSPQHSPSN 1811
Score = 101 bits (251), Expect = 3e-20
Identities = 61/127 (48%), Positives = 75/127 (59%), Gaps = 7/127 (5%)
Frame = +2
Query: 53 GRSPISGTPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
G SP S +P H G SP+ +SP SP+ +SP +SP Y+ SSPG
Sbjct: 1544 GMSP-SWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSP----------TSPNYTASSPG 1592
Query: 227 -----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
YSPSSP YSPTSP Y+ SP Y+ T+P ++P S YSPS+ GYSPTSP YSPT
Sbjct: 1593 GASPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPT-- 1650
Query: 392 SYSPTSP 412
S P+SP
Sbjct: 1651 SNFPSSP 1657
Score = 99.0 bits (245), Expect = 1e-19
Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPIS-GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY DG +PG + G+P + SP Y SP L + Q SP +SP
Sbjct: 1768 PSY-DG-----SPGSPQYTPGSPQYSPA-SPKY--SPTSPLYSPSSPQHSP---SNQYSP 1815
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTS 367
T S YS +SP YSP+ YSP+S YSPTSP Y+PT+ YSPTSP YSP++P YSPTS
Sbjct: 1816 TGST-YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTS 1874
Query: 368 PAYSPTSPSY 397
PAYSP+SP++
Sbjct: 1875 PAYSPSSPTF 1884
Score = 84.0 bits (206), Expect = 5e-15
Identities = 56/143 (39%), Positives = 70/143 (48%), Gaps = 15/143 (10%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G++ T G S + GT G S M P N ++ G ++ P +
Sbjct: 1475 GIEIPNTLGSSMLGGTAMFIGGGSTPSMTPPMTPWVNCNTPRYFSPPGHVSAMTPGGPSF 1534
Query: 209 SPSSPG-YSPSSPGYSPTSPGYSPTSPG-----YSP----TSPGYSPTSPTYSPSSPG-- 352
SPS+ S SP +SP PG SP+SP Y P SP YSPTSP Y+ SSPG
Sbjct: 1535 SPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPYYPASPSVSPSYSPTSPNYTASSPGGA 1594
Query: 353 ---YSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSPTSP Y+ SP
Sbjct: 1595 SPNYSPSSPNYSPTSPLYAAASP 1617
Score = 78.2 bits (191), Expect = 3e-13
Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Frame = +2
Query: 47 TPGRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+P SP S +P H SPS SP ++SP M+ SS YS
Sbjct: 1790 SPKYSPTSPLYSPSSPQH----SPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYS 1842
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPG-YSPTSPGYSPTSPTYSPS 343
P+SP Y+P++ YSPTSP YSPT+P YSPTSP YSP+SPT+ S
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[169][TOP]
>UniRef100_B3NUC1 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
RepID=B3NUC1_DROER
Length = 1889
Score = 122 bits (305), Expect = 2e-26
Identities = 66/130 (50%), Positives = 82/130 (63%), Gaps = 6/130 (4%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
G +P S S T SP Y +P+ + SP+ G +SP ++ YSPSS
Sbjct: 1632 GYSPSSSGYSPT-------SPVYSPTPHFQSSPSFAGS-----GSNIYSPANA--YSPSS 1677
Query: 221 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS-- 394
YSP+SP YSPTSP YSP+SP YSPTSP YSPTSP+YSP+SP Y+P +P+YSPTSP+
Sbjct: 1678 ANYSPNSPSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS 1737
Query: 395 ----YSPTSP 412
YSP SP
Sbjct: 1738 ASPHYSPASP 1747
Score = 120 bits (300), Expect = 6e-26
Identities = 68/134 (50%), Positives = 81/134 (60%), Gaps = 10/134 (7%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEG----------MMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
G +P S TP+ + + SP+ SP + A +SP ++SP
Sbjct: 1639 GYSPTSPVYSPTPHFQSSPSFAGSGSNIYSPANAYSP-------SSANYSP--NSPSYSP 1689
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
T SP YSPSSP YSP+SP YSPTSP YSPTSP Y+P +P YSPTSP YS +SP YSP SP
Sbjct: 1690 T-SPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPHYSPASP 1747
Query: 371 AYSPTSPSYSPTSP 412
AYS T YSPTSP
Sbjct: 1748 AYSQTGVKYSPTSP 1761
Score = 107 bits (267), Expect = 4e-22
Identities = 60/127 (47%), Positives = 75/127 (59%), Gaps = 6/127 (4%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGM-MSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
MTPG S + + MSPS+ + + SPY SP+ SP YSP+S
Sbjct: 1527 MTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPA---SPSVSPSYSPTS 1583
Query: 221 PGYSPSSPG-----YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
P Y+ SSPG YSP+SP YSPTSP Y+ SP Y+ T+P ++P S GYSP+S YSPT
Sbjct: 1584 PNYTASSPGGASPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSSGYSPT 1643
Query: 386 SPSYSPT 406
SP YSPT
Sbjct: 1644 SPVYSPT 1650
Score = 107 bits (266), Expect = 5e-22
Identities = 69/154 (44%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Frame = +2
Query: 44 MTPGRSPIS---GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
+TP SP S H SP+Y + ++ SPT+ +SP SP SP Y+P
Sbjct: 1725 VTPSYSPTSPNYSASPHYSPASPAYSQT-GVKYSPTSPT-YSPPSPSYDGSP-GSPQYTP 1781
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPG---------------------------YSPTSPGY 313
SP YSP+SP YSPTSP YSP+SP YSP+S Y
Sbjct: 1782 GSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKY 1841
Query: 314 SPTSPTYSPSSPGYSPTSPAYSPTSPS-YSPTSP 412
SPTSPTY+P++ YSPTSP YSPT+PS YSPTSP
Sbjct: 1842 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Score = 104 bits (260), Expect = 3e-21
Identities = 62/119 (52%), Positives = 73/119 (61%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPS------------- 238
SPSY SP Q+SP +SPTS P YSPSSP +SPS
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSP--ASPKYSPTS-PLYSPSSPQHSPSNQYSPTGSTYSAT 1823
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSPTSPSYSPTSP 412
SP YSP YSP+S YSPTSP Y+PT+ YSP+SP YSPT+P+ YSPTSP+YSP+SP
Sbjct: 1824 SPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 103 bits (257), Expect = 6e-21
Identities = 59/111 (53%), Positives = 72/111 (64%), Gaps = 7/111 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS-----SPGYSPSSPGYSPSSPGYSPTS 262
SPSY SPT+ ++P ++SPTS SP YSP+SP YS + YSPTS
Sbjct: 1712 SPSY--------SPTSP-NYTPVTP--SYSPTSPNYSASPHYSPASPAYSQTGVKYSPTS 1760
Query: 263 PGYSPTSPGY--SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
P YSP SP Y SP SP Y+P SP YSP+SP YSPTSP YSP+SP +SP++
Sbjct: 1761 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN 1811
Score = 102 bits (253), Expect = 2e-20
Identities = 67/160 (41%), Positives = 78/160 (48%), Gaps = 40/160 (25%)
Frame = +2
Query: 53 GRSPISGTPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
G SP S +P H G SP +SP SP+ +SP +SP Y+ SSPG
Sbjct: 1544 GMSP-SWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSP----------TSPNYTASSPG 1592
Query: 227 -----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT-- 385
YSPSSP YSPTSP Y+ SP Y+ T+P ++P S YSPSS GYSPTSP YSPT
Sbjct: 1593 GASPNYSPSSPNYSPTSPLYASASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTPH 1652
Query: 386 -------------------------------SPSYSPTSP 412
SPSYSPTSP
Sbjct: 1653 FQSSPSFAGSGSNIYSPANAYSPSSANYSPNSPSYSPTSP 1692
Score = 99.0 bits (245), Expect = 1e-19
Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPIS-GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY DG +PG + G+P + SP Y SP L + Q SP +SP
Sbjct: 1768 PSY-DG-----SPGSPQYTPGSPQYSPA-SPKY--SPTSPLYSPSSPQHSP---SNQYSP 1815
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTS 367
T S YS +SP YSP+ YSP+S YSPTSP Y+PT+ YSPTSP YSP++P YSPTS
Sbjct: 1816 TGST-YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTS 1874
Query: 368 PAYSPTSPSY 397
PAYSP+SP++
Sbjct: 1875 PAYSPSSPTF 1884
Score = 78.2 bits (191), Expect = 3e-13
Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Frame = +2
Query: 47 TPGRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+P SP S +P H SPS SP ++SP M+ SS YS
Sbjct: 1790 SPKYSPTSPLYSPSSPQH----SPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYS 1842
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPG-YSPTSPGYSPTSPTYSPS 343
P+SP Y+P++ YSPTSP YSPT+P YSPTSP YSP+SPT+ S
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[170][TOP]
>UniRef100_Q5KGG3 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
RepID=Q5KGG3_CRYNE
Length = 1786
Score = 122 bits (305), Expect = 2e-26
Identities = 77/155 (49%), Positives = 90/155 (58%), Gaps = 31/155 (20%)
Frame = +2
Query: 41 GMTP-GRSPISGTPYHE----GMMSPSYMLSPNLRLSPTNDAQFSPYVG-------GMAF 184
GM+P G SP S Y + SP+Y SP + SP+VG A+
Sbjct: 1541 GMSPAGYSPSSPAGYSPTSPFAVTSPAY--SPTSPFAGAAAGAASPWVGRGGYGATSPAY 1598
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGY------------SPTSPGYSPTSP 328
SPTS P YSP+SP +SP+SP +SP+SP YSP SP Y SPTSP YSPTSP
Sbjct: 1599 SPTS-PQYSPTSPQFSPTSPSFSPSSPTYSPASPAYGGAGAGNRASPYSPTSPAYSPTSP 1657
Query: 329 T-------YSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSPTSPA+SPTSPSYSPTSP
Sbjct: 1658 MGGITSPQYSPTSPRYSPTSPAFSPTSPSYSPTSP 1692
Score = 122 bits (305), Expect = 2e-26
Identities = 64/113 (56%), Positives = 75/113 (66%), Gaps = 8/113 (7%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPG--------YS 253
SP+Y SP + Q+SP +SPTS P +SP+SP YSP+SP YS
Sbjct: 1649 SPAY--SPTSPMGGITSPQYSPT--SPRYSPTS-PAFSPTSPSYSPTSPAPFQATSPRYS 1703
Query: 254 PTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP +SPTSP YSP SP YSPTSP YSP+SP YSPTSPAYSPTSP+Y +P
Sbjct: 1704 PTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYGGAAP 1756
Score = 114 bits (286), Expect = 3e-24
Identities = 65/117 (55%), Positives = 77/117 (65%), Gaps = 1/117 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S G+ SP Y SP R SPT+ A FSP ++SPTS + +SP
Sbjct: 1649 SPAYSPTSPMG---GITSPQYSPTSP--RYSPTSPA-FSPT--SPSYSPTSPAPFQATSP 1700
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
YSP+SP +SPTSP YSP SP YSPTSP YSPTSP YSP+SP YSPTSPAY +P+
Sbjct: 1701 RYSPTSPQFSPTSPTYSPASPAYSPTSPQYSPTSPAYSPTSPAYSPTSPAYGGAAPN 1757
Score = 89.0 bits (219), Expect = 2e-16
Identities = 62/145 (42%), Positives = 74/145 (51%), Gaps = 37/145 (25%)
Frame = +2
Query: 89 GMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSP-------------GYSPSSPGY 229
G M+P ++P LSP +G AFSP S G SP G
Sbjct: 1484 GGMTPGGAMTPYDNLSPMWGGDKGA-LGHAAFSPIQSSANDEGGNFAYMGYGQSPMHGGM 1542
Query: 230 SPSSPGYSPTSP-GYSPTSPGYSPTSPGYSP-----------------------TSPTYS 337
SP+ GYSP+SP GYSPTSP ++ TSP YSP TSP YS
Sbjct: 1543 SPA--GYSPSSPAGYSPTSP-FAVTSPAYSPTSPFAGAAAGAASPWVGRGGYGATSPAYS 1599
Query: 338 PSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSPTSP +SPTSPS+SP+SP
Sbjct: 1600 PTSPQYSPTSPQFSPTSPSFSPSSP 1624
Score = 82.4 bits (202), Expect = 1e-14
Identities = 52/110 (47%), Positives = 60/110 (54%), Gaps = 10/110 (9%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQF---SPYVGGMA--FSPTSSPGYSPSSPGYSPSSPGYSPTS 262
SPSY SPT+ A F SP + FSPTS P YSP+SP YSP+SP YSPTS
Sbjct: 1684 SPSY--------SPTSPAPFQATSPRYSPTSPQFSPTS-PTYSPASPAYSPTSPQYSPTS 1734
Query: 263 PGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS-----PTSPSY 397
P YSPTSP YSPTSP Y +P + P + TSPS+
Sbjct: 1735 PAYSPTSPAYSPTSPAYGGAAPNGGTAQQQNGQARPGWGNTGGYGTSPSW 1784
[171][TOP]
>UniRef100_A9UNH9 DNA-directed RNA polymerase n=1 Tax=Drosophila melanogaster
RepID=A9UNH9_DROME
Length = 1887
Score = 121 bits (304), Expect = 2e-26
Identities = 63/101 (62%), Positives = 71/101 (70%), Gaps = 8/101 (7%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPG--YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSP 307
SPT Q SP G S SPG YSPSS YSP+SP YSPTSP YSP+SP YSPTSP
Sbjct: 1646 SPTVQFQSSPSFAGSG-SNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSP 1704
Query: 308 GYSPTSPTYSPSSPGYSPTSPAYSPTSPS------YSPTSP 412
YSPTSP+YSP+SP Y+P +P+YSPTSP+ YSP SP
Sbjct: 1705 CYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASP 1745
Score = 110 bits (274), Expect = 6e-23
Identities = 69/162 (42%), Positives = 83/162 (51%), Gaps = 42/162 (25%)
Frame = +2
Query: 53 GRSPISGTPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT--SSPGYSPSS 220
G SP S +P H G SP +SP SP+ +SP S +SP YSPSS
Sbjct: 1544 GMSP-SWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 221 PGYSPSSP-----GYSPTSPGYSPTSPGYSPTSPGYSPTSP------------------- 328
P YSP+SP Y+ T+P ++P S GYSP+S GYSPTSP
Sbjct: 1603 PNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGS 1662
Query: 329 --------------TYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSPTSP+YSP+SPSYSPTSP
Sbjct: 1663 NIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSP 1704
Score = 109 bits (272), Expect = 1e-22
Identities = 69/138 (50%), Positives = 80/138 (57%), Gaps = 14/138 (10%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSP-YVGGMAFSPTSS------ 199
G +P S S T SP Y + + SP+ S Y G A+SP+SS
Sbjct: 1630 GYSPSSSGYSPT-------SPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNS 1682
Query: 200 PGYSPSSP-------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 358
P YSP+SP YSP+SP YSPTSP YSPTSP Y+P +P YSPTSP YS +SP YS
Sbjct: 1683 PSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYS 1741
Query: 359 PTSPAYSPTSPSYSPTSP 412
P SPAYS T YSPTSP
Sbjct: 1742 PASPAYSQTGVKYSPTSP 1759
Score = 104 bits (260), Expect = 3e-21
Identities = 71/153 (46%), Positives = 88/153 (57%), Gaps = 20/153 (13%)
Frame = +2
Query: 14 PSYMD-GLDFGMTPGRSPISGTPYHEGMM----SPSYML-SPNLRLSPTNDAQFSPYVGG 175
PSY ++ +P SP S G+ SP+Y SP+ SP Q++P G
Sbjct: 1725 PSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSP-GSPQYTP--GS 1781
Query: 176 MAFSPTSSPGYSPSSPGYSPSSPGYSP-------------TSPGYSPTSPGYSPTSPGYS 316
+SP +SP YSP+SP YSPSSP +SP TSP YSP YSP+S YS
Sbjct: 1782 PQYSP-ASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYS 1840
Query: 317 PTSPTYSPSSPGYSPTSPAYSPTSPS-YSPTSP 412
PTSPTY+P++ YSPT P YSPT+PS YSPTSP
Sbjct: 1841 PTSPTYTPTARNYSPTPPMYSPTAPSHYSPTSP 1873
Score = 103 bits (257), Expect = 6e-21
Identities = 59/111 (53%), Positives = 72/111 (64%), Gaps = 7/111 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS-----SPGYSPSSPGYSPSSPGYSPTS 262
SPSY SPT+ ++P ++SPTS SP YSP+SP YS + YSPTS
Sbjct: 1710 SPSY--------SPTSP-NYTPVTP--SYSPTSPNYSASPQYSPASPAYSQTGVKYSPTS 1758
Query: 263 PGYSPTSPGY--SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
P YSP SP Y SP SP Y+P SP YSP+SP YSPTSP YSP+SP +SP++
Sbjct: 1759 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN 1809
Score = 102 bits (255), Expect = 1e-20
Identities = 61/119 (51%), Positives = 72/119 (60%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPS------------- 238
SPSY SP Q+SP +SPTS P YSPSSP +SPS
Sbjct: 1765 SPSYDGSPGSPQYTPGSPQYSP--ASPKYSPTS-PLYSPSSPQHSPSNQYSPTGSTYSAT 1821
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSPTSPSYSPTSP 412
SP YSP YSP+S YSPTSP Y+PT+ YSP+ P YSPT+P+ YSPTSP+YSP+SP
Sbjct: 1822 SPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSPTSPAYSPSSP 1880
Score = 102 bits (254), Expect = 1e-20
Identities = 63/136 (46%), Positives = 76/136 (55%), Gaps = 3/136 (2%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
P Y + F +P + Y SP SP+ N +SP ++SP
Sbjct: 1643 PVYSPTVQFQSSPSFAGSGSNIY-----SPGNAYSPSSSNYSPNSPSYSPT--SPSYSP- 1694
Query: 194 SSPGYSPSSPGYSPSSP---GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SSP YSP+SP YSP+SP PTSP Y+P +P YSPTSP YS SP YSP+SP YS T
Sbjct: 1695 SSPSYSPTSPCYSPTSPSYS---PTSPNYTPVTPSYSPTSPNYS-ASPQYSPASPAYSQT 1750
Query: 365 SPAYSPTSPSYSPTSP 412
YSPTSP+YSP SP
Sbjct: 1751 GVKYSPTSPTYSPPSP 1766
Score = 97.1 bits (240), Expect = 6e-19
Identities = 63/130 (48%), Positives = 79/130 (60%), Gaps = 2/130 (1%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPIS-GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY DG +PG + G+P + SP Y SP L + Q SP +SP
Sbjct: 1766 PSY-DG-----SPGSPQYTPGSPQYSPA-SPKY--SPTSPLYSPSSPQHSP---SNQYSP 1813
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTS 367
T S YS +SP YSP+ YSP+S YSPTSP Y+PT+ YSPT P YSP++P YSPTS
Sbjct: 1814 TGST-YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTPPMYSPTAPSHYSPTS 1872
Query: 368 PAYSPTSPSY 397
PAYSP+SP++
Sbjct: 1873 PAYSPSSPTF 1882
Score = 84.7 bits (208), Expect = 3e-15
Identities = 55/138 (39%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G++ T G S + G G S M P + N ++ G ++ P +
Sbjct: 1475 GIEIPNTLGNSMLGGAAMFIGGGSTPSMTPPMTPWANCNTPRYFSPPGHVSAMTPGGPSF 1534
Query: 209 SPSSPG-YSPSSPGYSPTSPGYSPTSPG-----YSP----TSPGYSPTSPTYSPSSPGYS 358
SPS+ S SP +SP PG SP+SPG Y P SP YSPTSP Y+ SSPG
Sbjct: 1535 SPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPG-- 1592
Query: 359 PTSPAYSPTSPSYSPTSP 412
SP YSP+SP+YSPTSP
Sbjct: 1593 GASPNYSPSSPNYSPTSP 1610
Score = 76.3 bits (186), Expect = 1e-12
Identities = 46/105 (43%), Positives = 58/105 (55%), Gaps = 6/105 (5%)
Frame = +2
Query: 47 TPGRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+P SP S +P H SPS SP ++SP M+ SS YS
Sbjct: 1788 SPKYSPTSPLYSPSSPQH----SPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYS 1840
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPG-YSPTSPGYSPTSPTYSPS 343
P+SP Y+P++ YSPT P YSPT+P YSPTSP YSP+SPT+ S
Sbjct: 1841 PTSPTYTPTARNYSPTPPMYSPTAPSHYSPTSPAYSPSSPTFEES 1885
[172][TOP]
>UniRef100_P04052 DNA-directed RNA polymerase II subunit RPB1 n=2 Tax=Drosophila
melanogaster RepID=RPB1_DROME
Length = 1887
Score = 121 bits (304), Expect = 2e-26
Identities = 63/101 (62%), Positives = 71/101 (70%), Gaps = 8/101 (7%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPG--YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSP 307
SPT Q SP G S SPG YSPSS YSP+SP YSPTSP YSP+SP YSPTSP
Sbjct: 1646 SPTVQFQSSPSFAGSG-SNIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSP 1704
Query: 308 GYSPTSPTYSPSSPGYSPTSPAYSPTSPS------YSPTSP 412
YSPTSP+YSP+SP Y+P +P+YSPTSP+ YSP SP
Sbjct: 1705 CYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPQYSPASP 1745
Score = 110 bits (274), Expect = 6e-23
Identities = 69/162 (42%), Positives = 83/162 (51%), Gaps = 42/162 (25%)
Frame = +2
Query: 53 GRSPISGTPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT--SSPGYSPSS 220
G SP S +P H G SP +SP SP+ +SP S +SP YSPSS
Sbjct: 1544 GMSP-SWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 221 PGYSPSSP-----GYSPTSPGYSPTSPGYSPTSPGYSPTSP------------------- 328
P YSP+SP Y+ T+P ++P S GYSP+S GYSPTSP
Sbjct: 1603 PNYSPTSPLYASPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTVQFQSSPSFAGSGS 1662
Query: 329 --------------TYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSPTSP+YSP+SPSYSPTSP
Sbjct: 1663 NIYSPGNAYSPSSSNYSPNSPSYSPTSPSYSPSSPSYSPTSP 1704
Score = 109 bits (272), Expect = 1e-22
Identities = 69/138 (50%), Positives = 80/138 (57%), Gaps = 14/138 (10%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSP-YVGGMAFSPTSS------ 199
G +P S S T SP Y + + SP+ S Y G A+SP+SS
Sbjct: 1630 GYSPSSSGYSPT-------SPVYSPTVQFQSSPSFAGSGSNIYSPGNAYSPSSSNYSPNS 1682
Query: 200 PGYSPSSP-------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 358
P YSP+SP YSP+SP YSPTSP YSPTSP Y+P +P YSPTSP YS +SP YS
Sbjct: 1683 PSYSPTSPSYSPSSPSYSPTSPCYSPTSPSYSPTSPNYTPVTPSYSPTSPNYS-ASPQYS 1741
Query: 359 PTSPAYSPTSPSYSPTSP 412
P SPAYS T YSPTSP
Sbjct: 1742 PASPAYSQTGVKYSPTSP 1759
Score = 106 bits (265), Expect = 7e-22
Identities = 72/153 (47%), Positives = 89/153 (58%), Gaps = 20/153 (13%)
Frame = +2
Query: 14 PSYMD-GLDFGMTPGRSPISGTPYHEGMM----SPSYML-SPNLRLSPTNDAQFSPYVGG 175
PSY ++ +P SP S G+ SP+Y SP+ SP Q++P G
Sbjct: 1725 PSYSPTSPNYSASPQYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSP-GSPQYTP--GS 1781
Query: 176 MAFSPTSSPGYSPSSPGYSPSSPGYSP-------------TSPGYSPTSPGYSPTSPGYS 316
+SP +SP YSP+SP YSPSSP +SP TSP YSP YSP+S YS
Sbjct: 1782 PQYSP-ASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYS 1840
Query: 317 PTSPTYSPSSPGYSPTSPAYSPTSPS-YSPTSP 412
PTSPTY+P++ YSPTSP YSPT+PS YSPTSP
Sbjct: 1841 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1873
Score = 104 bits (260), Expect = 3e-21
Identities = 62/119 (52%), Positives = 73/119 (61%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPS------------- 238
SPSY SP Q+SP +SPTS P YSPSSP +SPS
Sbjct: 1765 SPSYDGSPGSPQYTPGSPQYSP--ASPKYSPTS-PLYSPSSPQHSPSNQYSPTGSTYSAT 1821
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSPTSPSYSPTSP 412
SP YSP YSP+S YSPTSP Y+PT+ YSP+SP YSPT+P+ YSPTSP+YSP+SP
Sbjct: 1822 SPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1880
Score = 103 bits (257), Expect = 6e-21
Identities = 59/111 (53%), Positives = 72/111 (64%), Gaps = 7/111 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS-----SPGYSPSSPGYSPSSPGYSPTS 262
SPSY SPT+ ++P ++SPTS SP YSP+SP YS + YSPTS
Sbjct: 1710 SPSY--------SPTSP-NYTPVTP--SYSPTSPNYSASPQYSPASPAYSQTGVKYSPTS 1758
Query: 263 PGYSPTSPGY--SPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
P YSP SP Y SP SP Y+P SP YSP+SP YSPTSP YSP+SP +SP++
Sbjct: 1759 PTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSN 1809
Score = 102 bits (254), Expect = 1e-20
Identities = 63/136 (46%), Positives = 76/136 (55%), Gaps = 3/136 (2%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
P Y + F +P + Y SP SP+ N +SP ++SP
Sbjct: 1643 PVYSPTVQFQSSPSFAGSGSNIY-----SPGNAYSPSSSNYSPNSPSYSPT--SPSYSP- 1694
Query: 194 SSPGYSPSSPGYSPSSP---GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SSP YSP+SP YSP+SP PTSP Y+P +P YSPTSP YS SP YSP+SP YS T
Sbjct: 1695 SSPSYSPTSPCYSPTSPSYS---PTSPNYTPVTPSYSPTSPNYS-ASPQYSPASPAYSQT 1750
Query: 365 SPAYSPTSPSYSPTSP 412
YSPTSP+YSP SP
Sbjct: 1751 GVKYSPTSPTYSPPSP 1766
Score = 99.0 bits (245), Expect = 1e-19
Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPIS-GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY DG +PG + G+P + SP Y SP L + Q SP +SP
Sbjct: 1766 PSY-DG-----SPGSPQYTPGSPQYSPA-SPKY--SPTSPLYSPSSPQHSP---SNQYSP 1813
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTS 367
T S YS +SP YSP+ YSP+S YSPTSP Y+PT+ YSPTSP YSP++P YSPTS
Sbjct: 1814 TGST-YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTS 1872
Query: 368 PAYSPTSPSY 397
PAYSP+SP++
Sbjct: 1873 PAYSPSSPTF 1882
Score = 84.7 bits (208), Expect = 3e-15
Identities = 55/138 (39%), Positives = 70/138 (50%), Gaps = 10/138 (7%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G++ T G S + G G S M P + N ++ G ++ P +
Sbjct: 1475 GIEIPNTLGNSMLGGAAMFIGGGSTPSMTPPMTPWANCNTPRYFSPPGHVSAMTPGGPSF 1534
Query: 209 SPSSPG-YSPSSPGYSPTSPGYSPTSPG-----YSP----TSPGYSPTSPTYSPSSPGYS 358
SPS+ S SP +SP PG SP+SPG Y P SP YSPTSP Y+ SSPG
Sbjct: 1535 SPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPG-- 1592
Query: 359 PTSPAYSPTSPSYSPTSP 412
SP YSP+SP+YSPTSP
Sbjct: 1593 GASPNYSPSSPNYSPTSP 1610
Score = 78.2 bits (191), Expect = 3e-13
Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Frame = +2
Query: 47 TPGRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+P SP S +P H SPS SP ++SP M+ SS YS
Sbjct: 1788 SPKYSPTSPLYSPSSPQH----SPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYS 1840
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPG-YSPTSPGYSPTSPTYSPS 343
P+SP Y+P++ YSPTSP YSPT+P YSPTSP YSP+SPT+ S
Sbjct: 1841 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1885
[173][TOP]
>UniRef100_B4L732 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
RepID=B4L732_DROMO
Length = 1889
Score = 121 bits (303), Expect = 3e-26
Identities = 62/101 (61%), Positives = 72/101 (71%), Gaps = 8/101 (7%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPG--YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSP 307
SPT++ Q SP G S SPG YSPSS YSP+SP YSP SP YSP+SP YSPTSP
Sbjct: 1648 SPTSNFQSSPSFAGSG-SNMYSPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSP 1706
Query: 308 GYSPTSPTYSPSSPGYSPTSPAYSPTSPS------YSPTSP 412
YSPTSP+YSP+SP Y+P +P+YSPTSP+ YSP SP
Sbjct: 1707 CYSPTSPSYSPTSPNYTPVTPSYSPTSPNYSASPHYSPASP 1747
Score = 118 bits (295), Expect = 2e-25
Identities = 61/107 (57%), Positives = 67/107 (62%)
Frame = +2
Query: 92 MMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY 271
M SP SP+ N +SP SP YSPSSP YSP+SP YSPTSP Y
Sbjct: 1666 MYSPGNAYSPSSSNYSPNSPSYSP----------MSPSYSPSSPSYSPTSPCYSPTSPSY 1715
Query: 272 SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSP Y+P +P YSPTSP YS +SP YSP SPAYS T YSPTSP
Sbjct: 1716 SPTSPNYTPVTPSYSPTSPNYS-ASPHYSPASPAYSQTGVKYSPTSP 1761
Score = 110 bits (274), Expect = 6e-23
Identities = 68/158 (43%), Positives = 86/158 (54%), Gaps = 37/158 (23%)
Frame = +2
Query: 50 PGRSPISGTPYHEGMMSPSYMLSPNLR--LSPTNDAQFSPYVGGMA--FSPTSSPGYSPS 217
PG SP S P MSP + SP++ SPT+ + GG + +SP SSP YSP+
Sbjct: 1554 PGSSPSSPGP----SMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSP-SSPNYSPT 1608
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP----------------------- 328
SP Y+ +SP Y+ T+P ++P S GYSP+S GYSPTSP
Sbjct: 1609 SPLYASTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGSGSNMYS 1668
Query: 329 ----------TYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSP SP+YSP+SPSYSPTSP
Sbjct: 1669 PGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSP 1706
Score = 107 bits (266), Expect = 5e-22
Identities = 69/154 (44%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Frame = +2
Query: 44 MTPGRSPIS---GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
+TP SP S H SP+Y + ++ SPT+ +SP SP SP Y+P
Sbjct: 1725 VTPSYSPTSPNYSASPHYSPASPAYSQT-GVKYSPTSPT-YSPPSPSYDGSP-GSPQYTP 1781
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPG---------------------------YSPTSPGY 313
SP YSP+SP YSPTSP YSP+SP YSP+S Y
Sbjct: 1782 GSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKY 1841
Query: 314 SPTSPTYSPSSPGYSPTSPAYSPTSPS-YSPTSP 412
SPTSPTY+P++ YSPTSP YSPT+PS YSPTSP
Sbjct: 1842 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Score = 105 bits (261), Expect = 2e-21
Identities = 63/130 (48%), Positives = 78/130 (60%), Gaps = 8/130 (6%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS-----SPG 205
M+P SP S + SP Y SP+ + N +P ++SPTS SP
Sbjct: 1690 MSPSYSPSSPS---YSPTSPCYSPTSPSYSPTSPNYTPVTP-----SYSPTSPNYSASPH 1741
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGY--SPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
YSP+SP YS + YSPTSP YSP SP Y SP SP Y+P SP YSP+SP YSPTSP YS
Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYS 1801
Query: 380 PTSPSYSPTS 409
P+SP +SP++
Sbjct: 1802 PSSPQHSPSN 1811
Score = 104 bits (260), Expect = 3e-21
Identities = 62/119 (52%), Positives = 73/119 (61%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPS------------- 238
SPSY SP Q+SP +SPTS P YSPSSP +SPS
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSP--ASPKYSPTS-PLYSPSSPQHSPSNQYSPTGSTYSAT 1823
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSPTSPSYSPTSP 412
SP YSP YSP+S YSPTSP Y+PT+ YSP+SP YSPT+P+ YSPTSP+YSP+SP
Sbjct: 1824 SPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 103 bits (258), Expect = 5e-21
Identities = 62/126 (49%), Positives = 73/126 (57%), Gaps = 7/126 (5%)
Frame = +2
Query: 53 GRSPISGTPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
G SP S +P H G SP +SP SP+ +SP +SP Y+ SSPG
Sbjct: 1544 GMSP-SWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSP----------TSPNYTASSPG 1592
Query: 227 -----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
YSPSSP YSPTSP Y+ TSP Y+ T+P ++P S YSPSS GYSPTSP YSPTS
Sbjct: 1593 GASPNYSPSSPNYSPTSPLYASTSPRYASTTPNFNPQSTGYSPSSSGYSPTSPVYSPTSN 1652
Query: 392 SYSPTS 409
S S
Sbjct: 1653 FQSSPS 1658
Score = 99.0 bits (245), Expect = 1e-19
Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPIS-GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY DG +PG + G+P + SP Y SP L + Q SP +SP
Sbjct: 1768 PSY-DG-----SPGSPQYTPGSPQYSPA-SPKY--SPTSPLYSPSSPQHSP---SNQYSP 1815
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTS 367
T S YS +SP YSP+ YSP+S YSPTSP Y+PT+ YSPTSP YSP++P YSPTS
Sbjct: 1816 TGST-YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTS 1874
Query: 368 PAYSPTSPSY 397
PAYSP+SP++
Sbjct: 1875 PAYSPSSPTF 1884
Score = 83.2 bits (204), Expect = 8e-15
Identities = 55/143 (38%), Positives = 71/143 (49%), Gaps = 15/143 (10%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G++ + G S + G G S M P + ++ G ++ P +
Sbjct: 1475 GIEIPNSLGSSMLGGAAIFMGGGSTPSMTPPMTPWVNCHTPRYFSPSGHVSAMTPGGPSF 1534
Query: 209 SPSSPG-YSPSSPGYSPTSPGYSPTSPG-----YSP----TSPGYSPTSPTYSPSSPG-- 352
SPS+ S SP +SP PG SP+SPG Y P SP YSPTSP Y+ SSPG
Sbjct: 1535 SPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGA 1594
Query: 353 ---YSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSPTSP Y+ TSP
Sbjct: 1595 SPNYSPSSPNYSPTSPLYASTSP 1617
Score = 78.2 bits (191), Expect = 3e-13
Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Frame = +2
Query: 47 TPGRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+P SP S +P H SPS SP ++SP M+ SS YS
Sbjct: 1790 SPKYSPTSPLYSPSSPQH----SPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYS 1842
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPG-YSPTSPGYSPTSPTYSPS 343
P+SP Y+P++ YSPTSP YSPT+P YSPTSP YSP+SPT+ S
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[174][TOP]
>UniRef100_B4H2R8 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
RepID=B4H2R8_DROPE
Length = 1804
Score = 121 bits (303), Expect = 3e-26
Identities = 62/101 (61%), Positives = 72/101 (71%), Gaps = 8/101 (7%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPG--YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSP 307
SPT++ SP G S SPG YSPSS YSP+SP YSPTSP YSP+SP YSPTSP
Sbjct: 1582 SPTSNFPSSPSFAGSG-SNMYSPGNAYSPSSTNYSPNSPSYSPTSPSYSPSSPSYSPTSP 1640
Query: 308 GYSPTSPTYSPSSPGYSPTSPAYSPTSPS------YSPTSP 412
YSPTSP+YSP+SP Y+P +P+YSPTSP+ YSP SP
Sbjct: 1641 CYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASP 1681
Score = 114 bits (286), Expect = 3e-24
Identities = 72/166 (43%), Positives = 82/166 (49%), Gaps = 44/166 (26%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMM-SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S P S S M SP SP++ +SP ++SPTS P YSPSSP
Sbjct: 1578 SPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSPSS-TNYSP--NSPSYSPTS-PSYSPSSP 1633
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS---------------------- 337
YSP+SP YSPTSP YSPTSP Y+P +P YSPTSP YS
Sbjct: 1634 SYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYSASPHYSPASPAYSQTGAKYSPT 1693
Query: 338 ---------------------PSSPGYSPTSPAYSPTSPSYSPTSP 412
P SP YSP SP YSPTSP YSP+SP
Sbjct: 1694 SPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSP 1739
Score = 104 bits (259), Expect = 3e-21
Identities = 65/137 (47%), Positives = 77/137 (56%), Gaps = 16/137 (11%)
Frame = +2
Query: 47 TPGRSPIS---GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
TP SP S H SP+Y + + SPT+ +SP SP SP Y+P
Sbjct: 1660 TPSYSPTSPNYSASPHYSPASPAYSQT-GAKYSPTSPT-YSPPSPSYDGSP-GSPQYTPG 1716
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSP-------------TSPGYSPTSPTYSPSSPGYS 358
SP YSP+SP YSPTSP YSP+SP +SP TSP YSP YSPSS YS
Sbjct: 1717 SPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYS 1776
Query: 359 PTSPAYSPTSPSYSPTS 409
PTSP Y+PT+ +YSPTS
Sbjct: 1777 PTSPTYTPTARNYSPTS 1793
Score = 103 bits (258), Expect = 5e-21
Identities = 68/141 (48%), Positives = 78/141 (55%), Gaps = 19/141 (13%)
Frame = +2
Query: 47 TPGRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS----- 196
+P SP S TP + SP+Y SP+ SP + A G +SPTS
Sbjct: 1646 SPSYSPTSPNYTPATPSYSPT-SPNYSASPHY--SPASPAYSQT---GAKYSPTSPTYSP 1699
Query: 197 -SPGY--SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPG------YSPTSPTYSPSSP 349
SP Y SP SP Y+P SP YSP SP YSPTSP YSP+SP YSPT TYS +SP
Sbjct: 1700 PSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSP 1759
Query: 350 GYSPTSPAYSPTSPSYSPTSP 412
YSP YSP+S YSPTSP
Sbjct: 1760 RYSPNMSIYSPSSTKYSPTSP 1780
Score = 99.8 bits (247), Expect = 9e-20
Identities = 61/133 (45%), Positives = 75/133 (56%), Gaps = 5/133 (3%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G++ T G S + GT G S M P +SP+ +SPTS P Y
Sbjct: 1475 GIEIPNTLGSSMLGGTAMFIGGGSTPSMTPPMTPVSPS-------------YSPTS-PNY 1520
Query: 209 SPSSPG-----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
+ SSPG YSPSSP YSPTSP Y+ SP Y+ T+P ++P S YSPS+ GYSPTSP
Sbjct: 1521 TASSPGGASPNYSPSSPNYSPTSPLYAAASPRYASTTPNFNPQSTGYSPSASGYSPTSPV 1580
Query: 374 YSPTSPSYSPTSP 412
YSPT S P+SP
Sbjct: 1581 YSPT--SNFPSSP 1591
[175][TOP]
>UniRef100_B8M2Y2 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500
RepID=B8M2Y2_TALSN
Length = 1755
Score = 121 bits (303), Expect = 3e-26
Identities = 64/123 (52%), Positives = 81/123 (65%), Gaps = 3/123 (2%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP---TSSPGYSPSSP 223
G SP S P++ +SP Y SP++ +SP GM+ + +SPG+SPSSP
Sbjct: 1564 GYSPTS--PFNTSPVSPGY--------SPSSS--YSPASPGMSITSPRFVTSPGFSPSSP 1611
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
+ +SP YSPTSP Y SP YSPTSP +SP+SP YSPSSP S +SPA+SPTSP+YSP
Sbjct: 1612 NFQTTSPAYSPTSPSYQQASPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSP 1671
Query: 404 TSP 412
TSP
Sbjct: 1672 TSP 1674
Score = 119 bits (299), Expect = 8e-26
Identities = 73/140 (52%), Positives = 86/140 (61%), Gaps = 17/140 (12%)
Frame = +2
Query: 44 MTPGRSPISG-TPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS------ 196
++PG SP S +P GM SP ++ SP S N SP A+SPTS
Sbjct: 1576 VSPGYSPSSSYSPASPGMSITSPRFVTSPGFSPSSPNFQTTSP-----AYSPTSPSYQQA 1630
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY-------SPSSPGY 355
SP YSP+SP +SPSSP YSP+SP S +SP +SPTSP YSPTSP SP+SP Y
Sbjct: 1631 SPSYSPTSPRFSPSSPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFSSPTSPKY 1690
Query: 356 SPTSPAYSPTSPS-YSPTSP 412
SP SPA+SPTSP YSPTSP
Sbjct: 1691 SPASPAWSPTSPEIYSPTSP 1710
Score = 109 bits (272), Expect = 1e-22
Identities = 60/133 (45%), Positives = 75/133 (56%), Gaps = 25/133 (18%)
Frame = +2
Query: 89 GMMSPSYMLSPNLRLSPTNDAQFSPY-----VGGMAFSPTSSPGYSPSSP-GYSPSSPGY 250
G P SP + A F+ Y +GG + +P S GYSP+SP SP SPGY
Sbjct: 1521 GTPDPDAKFSPIRQAGSETPAGFTSYQPSQGLGGFSPAPQSPGGYSPTSPFNTSPVSPGY 1580
Query: 251 SP-------------------TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
SP TSPG+SP+SP + TSP YSPTSP+Y +SP YSPTSP
Sbjct: 1581 SPSSSYSPASPGMSITSPRFVTSPGFSPSSPNFQTTSPAYSPTSPSYQQASPSYSPTSPR 1640
Query: 374 YSPTSPSYSPTSP 412
+SP+SP+YSP+SP
Sbjct: 1641 FSPSSPNYSPSSP 1653
Score = 68.9 bits (167), Expect = 2e-10
Identities = 48/107 (44%), Positives = 60/107 (56%), Gaps = 19/107 (17%)
Frame = +2
Query: 98 SPSYM-LSPNLRLS-----PTND--AQFSPYVGGMA-FSPTSSPGYSPSSPGYSPSSPGY 250
SP+Y SPN+ LS PT+ + SP +GG FS +SP YSP+SP +SP+SP
Sbjct: 1645 SPNYSPSSPNMSLSSPAFSPTSPTYSPTSPAIGGTRQFSSPTSPKYSPASPAWSPTSPEI 1704
Query: 251 ----------SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
SPTSP TSP YSPTSP Y +PTY ++PG P
Sbjct: 1705 YSPTSPNIHGSPTSPARGGTSPSYSPTSPQY---NPTYVYTNPGEVP 1748
[176][TOP]
>UniRef100_B0DB45 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
RepID=B0DB45_LACBS
Length = 1742
Score = 120 bits (302), Expect = 4e-26
Identities = 64/121 (52%), Positives = 77/121 (63%)
Frame = +2
Query: 50 PGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGY 229
PG SP S Y SPS++ T+ SPY + P++ +P+SP Y
Sbjct: 1549 PGYSPSSPNVYSP--TSPSFVPQSPFG-GATSPFGTSPYAASPYYDPSAR---NPTSPTY 1602
Query: 230 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
SP+SP + TSPGYSPTSP YSPTSP +SPTSP YSP SP +SPTSP YSPTSPS+SP S
Sbjct: 1603 SPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPAS 1662
Query: 410 P 412
P
Sbjct: 1663 P 1663
Score = 111 bits (278), Expect = 2e-23
Identities = 74/176 (42%), Positives = 85/176 (48%), Gaps = 49/176 (27%)
Frame = +2
Query: 32 LDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVG------------G 175
+D GMTPG+ ++ TPY S + NL A FSP G
Sbjct: 1480 IDGGMTPGQ--VAMTPYDTN----SPVWHDNLFKGDPASASFSPLASNGGEDAANFQYLG 1533
Query: 176 MAFSPTSSPGYSPSSPGYSPSSPG-YSPTSPGY--------------------------- 271
SP + G SP PGYSPSSP YSPTSP +
Sbjct: 1534 FGQSPLGAGGMSPGGPGYSPSSPNVYSPTSPSFVPQSPFGGATSPFGTSPYAASPYYDPS 1593
Query: 272 --SPTSPGYSP-------TSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
+PTSP YSP TSPGYSPTSP YSP+SP +SPTSP YSP SPS+SPTSP
Sbjct: 1594 ARNPTSPTYSPTSPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSP 1649
Score = 98.2 bits (243), Expect = 3e-19
Identities = 60/129 (46%), Positives = 71/129 (55%), Gaps = 6/129 (4%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
PS++ FG SP +PY SP Y S SPT +SPT
Sbjct: 1564 PSFVPQSPFG--GATSPFGTSPY---AASPYYDPSARNPTSPT-------------YSPT 1605
Query: 194 S------SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY 355
S SPGYSP+SP YSP+SP +SPTSP YSP SP +SPTSP YSPTSP++SP+SP
Sbjct: 1606 SPALNLTSPGYSPTSPRYSPTSPSFSPTSPRYSPQSPSFSPTSPRYSPTSPSFSPASPRC 1665
Query: 356 SPTSPAYSP 382
S Y P
Sbjct: 1666 KFLSIIYEP 1674
[177][TOP]
>UniRef100_Q9XZU9 DNA-directed RNA polymerase n=1 Tax=Drosophila subobscura
RepID=Q9XZU9_DROSU
Length = 1889
Score = 120 bits (301), Expect = 5e-26
Identities = 70/129 (54%), Positives = 79/129 (61%), Gaps = 7/129 (5%)
Frame = +2
Query: 47 TPGRSPISGTPYH-------EGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
+P SP S P M SP SP S TN + SP ++SPT SP
Sbjct: 1644 SPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSP----SSTNYSPNSP-----SYSPT-SPS 1693
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
YSPSSP YSP+SP YSP+SP YSPTSP Y+P +P YSPTSP YS +SP YSP SPAYS T
Sbjct: 1694 YSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYS-ASPHYSPASPAYSQT 1752
Query: 386 SPSYSPTSP 412
YSPTSP
Sbjct: 1753 GAKYSPTSP 1761
Score = 105 bits (263), Expect = 1e-21
Identities = 69/153 (45%), Positives = 82/153 (53%), Gaps = 31/153 (20%)
Frame = +2
Query: 47 TPGRSPIS---GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
TP SP S H SP+Y + + SPT+ +SP SP SP Y+P
Sbjct: 1726 TPSYSPTSPNYSASPHYSPASPAYSQT-GAKYSPTSPT-YSPPSPSYDGSP-GSPQYTPG 1782
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPG---------------------------YSPTSPGYS 316
SP YSP+SP YSPTSP YSP+SP YSP+S YS
Sbjct: 1783 SPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYS 1842
Query: 317 PTSPTYSPSSPGYSPTSPAYSPTSPS-YSPTSP 412
PTSPTY+P++ YSPTSP YSPT+PS YSPTSP
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Score = 104 bits (260), Expect = 3e-21
Identities = 62/119 (52%), Positives = 73/119 (61%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPS------------- 238
SPSY SP Q+SP +SPTS P YSPSSP +SPS
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSP--ASPKYSPTS-PLYSPSSPQHSPSNQYSPTGSTYSAT 1823
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSPTSPSYSPTSP 412
SP YSP YSP+S YSPTSP Y+PT+ YSP+SP YSPT+P+ YSPTSP+YSP+SP
Sbjct: 1824 SPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 104 bits (259), Expect = 3e-21
Identities = 62/133 (46%), Positives = 75/133 (56%), Gaps = 12/133 (9%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGM-----AFSPTS----- 196
+P S T SPSY SP + +SP ++SPTS
Sbjct: 1681 SPNSPSYSPTSPSYSPSSPSY--SPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSA 1738
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGY--SPTSPGYSPTSPTYSPSSPGYSPTSP 370
SP YSP+SP YS + YSPTSP YSP SP Y SP SP Y+P SP YSP+SP YSPTSP
Sbjct: 1739 SPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSP 1798
Query: 371 AYSPTSPSYSPTS 409
YSP+SP +SP++
Sbjct: 1799 LYSPSSPQHSPSN 1811
Score = 100 bits (250), Expect = 4e-20
Identities = 63/126 (50%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
Frame = +2
Query: 50 PGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG- 226
PG SP S P MSP Y SP++ SP ++SPTS P Y+ SSPG
Sbjct: 1554 PGSSPSSPAP----SMSPFYPASPSV----------SP-----SYSPTS-PNYTASSPGG 1593
Query: 227 ----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
YSPSSP YSPTSP Y+ SP Y+ T+P ++P S YSPS+ GYSPTSP YSPT S
Sbjct: 1594 ASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPT--S 1651
Query: 395 YSPTSP 412
P+SP
Sbjct: 1652 NFPSSP 1657
Score = 99.0 bits (245), Expect = 1e-19
Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPIS-GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY DG +PG + G+P + SP Y SP L + Q SP +SP
Sbjct: 1768 PSY-DG-----SPGSPQYTPGSPQYSPA-SPKY--SPTSPLYSPSSPQHSP---SNQYSP 1815
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTS 367
T S YS +SP YSP+ YSP+S YSPTSP Y+PT+ YSPTSP YSP++P YSPTS
Sbjct: 1816 TGST-YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTS 1874
Query: 368 PAYSPTSPSY 397
PAYSP+SP++
Sbjct: 1875 PAYSPSSPTF 1884
Score = 83.2 bits (204), Expect = 8e-15
Identities = 55/143 (38%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G++ T G S + GT G S M P N ++ G ++ P +
Sbjct: 1475 GIEIPNTLGSSMLGGTAMFIGGGSTPSMTPPMTPWVNCNTPRYFSPPGHVSAMTPGGPSF 1534
Query: 209 SPSSPG-YSPSSPGYSPTSPGYSPTSPGYS---------PTSPGYSPTSPTYSPSSPG-- 352
SPS+ S SP +SP PG SP+SP S SP YSPTSP Y+ SSPG
Sbjct: 1535 SPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPSYSPTSPNYTASSPGGA 1594
Query: 353 ---YSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSPTSP Y+ SP
Sbjct: 1595 SPNYSPSSPNYSPTSPLYAAPSP 1617
Score = 78.2 bits (191), Expect = 3e-13
Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Frame = +2
Query: 47 TPGRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+P SP S +P H SPS SP ++SP M+ SS YS
Sbjct: 1790 SPKYSPTSPLYSPSSPQH----SPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYS 1842
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPG-YSPTSPGYSPTSPTYSPS 343
P+SP Y+P++ YSPTSP YSPT+P YSPTSP YSP+SPT+ S
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[178][TOP]
>UniRef100_Q9XZS2 DNA-directed RNA polymerase n=1 Tax=Drosophila madeirensis
RepID=Q9XZS2_DROMD
Length = 1889
Score = 120 bits (301), Expect = 5e-26
Identities = 70/129 (54%), Positives = 79/129 (61%), Gaps = 7/129 (5%)
Frame = +2
Query: 47 TPGRSPISGTPYH-------EGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPG 205
+P SP S P M SP SP S TN + SP ++SPT SP
Sbjct: 1644 SPVYSPTSNFPSSPSFAGSGSNMYSPGNAYSP----SSTNYSPNSP-----SYSPT-SPS 1693
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
YSPSSP YSP+SP YSP+SP YSPTSP Y+P +P YSPTSP YS +SP YSP SPAYS T
Sbjct: 1694 YSPSSPSYSPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYS-ASPHYSPASPAYSQT 1752
Query: 386 SPSYSPTSP 412
YSPTSP
Sbjct: 1753 GAKYSPTSP 1761
Score = 105 bits (263), Expect = 1e-21
Identities = 69/153 (45%), Positives = 82/153 (53%), Gaps = 31/153 (20%)
Frame = +2
Query: 47 TPGRSPIS---GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
TP SP S H SP+Y + + SPT+ +SP SP SP Y+P
Sbjct: 1726 TPSYSPTSPNYSASPHYSPASPAYSQT-GAKYSPTSPT-YSPPSPSYDGSP-GSPQYTPG 1782
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPG---------------------------YSPTSPGYS 316
SP YSP+SP YSPTSP YSP+SP YSP+S YS
Sbjct: 1783 SPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYS 1842
Query: 317 PTSPTYSPSSPGYSPTSPAYSPTSPS-YSPTSP 412
PTSPTY+P++ YSPTSP YSPT+PS YSPTSP
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Score = 104 bits (260), Expect = 3e-21
Identities = 62/119 (52%), Positives = 73/119 (61%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPS------------- 238
SPSY SP Q+SP +SPTS P YSPSSP +SPS
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSP--ASPKYSPTS-PLYSPSSPQHSPSNQYSPTGSTYSAT 1823
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSPTSPSYSPTSP 412
SP YSP YSP+S YSPTSP Y+PT+ YSP+SP YSPT+P+ YSPTSP+YSP+SP
Sbjct: 1824 SPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 104 bits (259), Expect = 3e-21
Identities = 62/133 (46%), Positives = 75/133 (56%), Gaps = 12/133 (9%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGM-----AFSPTS----- 196
+P S T SPSY SP + +SP ++SPTS
Sbjct: 1681 SPNSPSYSPTSPSYSPSSPSY--SPTSPCYSPSSPSYSPTSPNYTPATPSYSPTSPNYSA 1738
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGY--SPTSPGYSPTSPTYSPSSPGYSPTSP 370
SP YSP+SP YS + YSPTSP YSP SP Y SP SP Y+P SP YSP+SP YSPTSP
Sbjct: 1739 SPHYSPASPAYSQTGAKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPASPKYSPTSP 1798
Query: 371 AYSPTSPSYSPTS 409
YSP+SP +SP++
Sbjct: 1799 LYSPSSPQHSPSN 1811
Score = 100 bits (250), Expect = 4e-20
Identities = 63/126 (50%), Positives = 75/126 (59%), Gaps = 5/126 (3%)
Frame = +2
Query: 50 PGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG- 226
PG SP S P MSP Y SP++ SP ++SPTS P Y+ SSPG
Sbjct: 1554 PGSSPSSPAP----SMSPFYPASPSV----------SP-----SYSPTS-PNYTASSPGG 1593
Query: 227 ----YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
YSPSSP YSPTSP Y+ SP Y+ T+P ++P S YSPS+ GYSPTSP YSPT S
Sbjct: 1594 ASPNYSPSSPNYSPTSPLYAAPSPRYASTTPNFNPQSTGYSPSASGYSPTSPVYSPT--S 1651
Query: 395 YSPTSP 412
P+SP
Sbjct: 1652 NFPSSP 1657
Score = 99.0 bits (245), Expect = 1e-19
Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPIS-GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY DG +PG + G+P + SP Y SP L + Q SP +SP
Sbjct: 1768 PSY-DG-----SPGSPQYTPGSPQYSPA-SPKY--SPTSPLYSPSSPQHSP---SNQYSP 1815
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTS 367
T S YS +SP YSP+ YSP+S YSPTSP Y+PT+ YSPTSP YSP++P YSPTS
Sbjct: 1816 TGST-YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTS 1874
Query: 368 PAYSPTSPSY 397
PAYSP+SP++
Sbjct: 1875 PAYSPSSPTF 1884
Score = 83.2 bits (204), Expect = 8e-15
Identities = 55/143 (38%), Positives = 69/143 (48%), Gaps = 15/143 (10%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G++ T G S + GT G S M P N ++ G ++ P +
Sbjct: 1475 GIEIPNTLGSSMLGGTAMFIGGGSTPSMTPPMTPWVNCNTPRYFSPPGHVSAMTPGGPSF 1534
Query: 209 SPSSPG-YSPSSPGYSPTSPGYSPTSPGYS---------PTSPGYSPTSPTYSPSSPG-- 352
SPS+ S SP +SP PG SP+SP S SP YSPTSP Y+ SSPG
Sbjct: 1535 SPSAASDASGMSPSWSPAHPGSSPSSPAPSMSPFYPASPSVSPSYSPTSPNYTASSPGGA 1594
Query: 353 ---YSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSPTSP Y+ SP
Sbjct: 1595 SPNYSPSSPNYSPTSPLYAAPSP 1617
Score = 78.2 bits (191), Expect = 3e-13
Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Frame = +2
Query: 47 TPGRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+P SP S +P H SPS SP ++SP M+ SS YS
Sbjct: 1790 SPKYSPTSPLYSPSSPQH----SPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYS 1842
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPG-YSPTSPGYSPTSPTYSPS 343
P+SP Y+P++ YSPTSP YSPT+P YSPTSP YSP+SPT+ S
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[179][TOP]
>UniRef100_B4MAN9 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
RepID=B4MAN9_DROVI
Length = 1889
Score = 119 bits (298), Expect = 1e-25
Identities = 69/128 (53%), Positives = 79/128 (61%), Gaps = 8/128 (6%)
Frame = +2
Query: 53 GRSPISG--TPYHEGMMSPSY------MLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G SP S +P SPS+ M SP SP++ S ++SP SP Y
Sbjct: 1639 GYSPTSPVYSPTSNFQSSPSFAGSGSNMYSPGNAYSPSSSNYSS---NSPSYSP-MSPSY 1694
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
SPSSP YSP+SP YSPTSP YSPTSP Y+P +P YSPTSP YS +SP YSP SPAYS T
Sbjct: 1695 SPSSPSYSPTSPCYSPTSPSYSPTSPNYTPATPSYSPTSPNYS-ASPHYSPASPAYSQTG 1753
Query: 389 PSYSPTSP 412
YSPTSP
Sbjct: 1754 VKYSPTSP 1761
Score = 108 bits (271), Expect = 1e-22
Identities = 69/164 (42%), Positives = 83/164 (50%), Gaps = 44/164 (26%)
Frame = +2
Query: 53 GRSPISGTPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT--SSPGYSPSS 220
G SP S +P H G SP +SP+ SP+ +SP S +SP YSPSS
Sbjct: 1544 GMSP-SWSPAHPGSSPSSPGPSMSPHFSTSPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 221 PGYSPSSPGYSPTS-------PGYSPTSPGYSPTSPGYSPTSPTYSP------------- 340
P YSP+SP Y+ TS P ++P S GYSP+S GYSPTSP YSP
Sbjct: 1603 PNYSPTSPLYTATSLRYASATPNFNPQSTGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGS 1662
Query: 341 --------------------SSPGYSPTSPAYSPTSPSYSPTSP 412
+SP YSP SP+YSP+SPSYSPTSP
Sbjct: 1663 GSNMYSPGNAYSPSSSNYSSNSPSYSPMSPSYSPSSPSYSPTSP 1706
Score = 108 bits (269), Expect = 2e-22
Identities = 73/153 (47%), Positives = 89/153 (58%), Gaps = 20/153 (13%)
Frame = +2
Query: 14 PSYMD-GLDFGMTPGRSPISGTPYHEGMM----SPSYML-SPNLRLSPTNDAQFSPYVGG 175
PSY ++ +P SP S G+ SP+Y SP+ SP Q++P G
Sbjct: 1727 PSYSPTSPNYSASPHYSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSP-GSPQYTP--GS 1783
Query: 176 MAFSPTSSPGYSPSSPGYSPSSPGYSP-------------TSPGYSPTSPGYSPTSPGYS 316
+SPTS P YSP+SP YSPSSP +SP TSP YSP YSP+S YS
Sbjct: 1784 PQYSPTS-PKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYS 1842
Query: 317 PTSPTYSPSSPGYSPTSPAYSPTSPS-YSPTSP 412
PTSPTY+P++ YSPTSP YSPT+PS YSPTSP
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Score = 104 bits (260), Expect = 3e-21
Identities = 63/130 (48%), Positives = 78/130 (60%), Gaps = 8/130 (6%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS-----SPG 205
M+P SP S + SP Y SP+ + N +P ++SPTS SP
Sbjct: 1690 MSPSYSPSSPS---YSPTSPCYSPTSPSYSPTSPNYTPATP-----SYSPTSPNYSASPH 1741
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGY--SPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
YSP+SP YS + YSPTSP YSP SP Y SP SP Y+P SP YSP+SP YSPTSP YS
Sbjct: 1742 YSPASPAYSQTGVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSPQYSPTSPKYSPTSPLYS 1801
Query: 380 PTSPSYSPTS 409
P+SP +SP++
Sbjct: 1802 PSSPQHSPSN 1811
Score = 104 bits (259), Expect = 3e-21
Identities = 68/158 (43%), Positives = 85/158 (53%), Gaps = 36/158 (22%)
Frame = +2
Query: 47 TPGRSPIS---GTPYHEGMMSPSYMLSPNLRLSPTNDAQF--SPYVGGMAFSPTSSPG-- 205
TP SP S H SP+Y + ++ SPT+ SP G SP +PG
Sbjct: 1726 TPSYSPTSPNYSASPHYSPASPAYSQT-GVKYSPTSPTYSPPSPSYDGSPGSPQYTPGSP 1784
Query: 206 -YSPSSPGYSPSSPGYSPTSPG---------------------------YSPTSPGYSPT 301
YSP+SP YSP+SP YSP+SP YSP+S YSPT
Sbjct: 1785 QYSPTSPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKYSPT 1844
Query: 302 SPGYSPTSPTYSPSSPGYSPTSPA-YSPTSPSYSPTSP 412
SP Y+PT+ YSP+SP YSPT+P+ YSPTSP+YSP+SP
Sbjct: 1845 SPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 102 bits (255), Expect = 1e-20
Identities = 61/131 (46%), Positives = 77/131 (58%), Gaps = 8/131 (6%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGM-MSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
GMTPG S + + MSPS+ + + SP+ + SP+ SP YSP+
Sbjct: 1526 GMTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPH---FSTSPSVSPSYSPT 1582
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTS-------PTYSPSSPGYSPTSPAY 376
SP Y+ SSPG + SP YSP+SP YSPTSP Y+ TS P ++P S GYSP+S Y
Sbjct: 1583 SPNYTASSPGGA--SPNYSPSSPNYSPTSPLYTATSLRYASATPNFNPQSTGYSPSSSGY 1640
Query: 377 SPTSPSYSPTS 409
SPTSP YSPTS
Sbjct: 1641 SPTSPVYSPTS 1651
Score = 99.8 bits (247), Expect = 9e-20
Identities = 60/118 (50%), Positives = 72/118 (61%), Gaps = 1/118 (0%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
TPG S T SP Y SP L + Q SP +SPT S YS +SP
Sbjct: 1780 TPGSPQYSPT-------SPKY--SPTSPLYSPSSPQHSP---SNQYSPTGST-YSATSPR 1826
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTSPAYSPTSPSY 397
YSP+ YSP+S YSPTSP Y+PT+ YSPTSP YSP++P YSPTSPAYSP+SP++
Sbjct: 1827 YSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTF 1884
Score = 82.0 bits (201), Expect = 2e-14
Identities = 58/150 (38%), Positives = 73/150 (48%), Gaps = 23/150 (15%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSS-PG 205
G++ + G S + G G S M P ++P + Y FSP+ G
Sbjct: 1475 GIEIPNSLGSSMLGGAAIFMGGGSTPSMTPP---MTPWVNCHTPRY-----FSPSGHVSG 1526
Query: 206 YSPSSPGYSPS--------SPGYSPTSPGYSPTSPGYS---------PTSPGYSPTSPTY 334
+P P +SPS SP +SP PG SP+SPG S SP YSPTSP Y
Sbjct: 1527 MTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPHFSTSPSVSPSYSPTSPNY 1586
Query: 335 SPSSPG-----YSPTSPAYSPTSPSYSPTS 409
+ SSPG YSP+SP YSPTSP Y+ TS
Sbjct: 1587 TASSPGGASPNYSPSSPNYSPTSPLYTATS 1616
[180][TOP]
>UniRef100_P14248 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Plasmodium
falciparum CDC/Honduras RepID=RPB1_PLAFD
Length = 2452
Score = 119 bits (298), Expect = 1e-25
Identities = 66/117 (56%), Positives = 75/117 (64%), Gaps = 7/117 (5%)
Frame = +2
Query: 83 HEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS-------SPGYSPSSPGYSPSS 241
+ + SPSY SP N+A +SP SP + + Y+ SP YS +S
Sbjct: 2243 NHNIYSPSY--SPTSPTYNANNAYYSPT------SPKNQNDQMNVNSQYNVMSPVYSVTS 2294
Query: 242 PGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 2295 PKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 2351
Score = 115 bits (287), Expect = 2e-24
Identities = 64/116 (55%), Positives = 73/116 (62%), Gaps = 11/116 (9%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SP+Y + N SPT+ + + + SP YS +SP YSP+SP YSPTSP YSP
Sbjct: 2255 SPTYNAN-NAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSP 2313
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP-----------SYSPTSP 412
TSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YS TSP
Sbjct: 2314 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSP 2369
Score = 113 bits (282), Expect = 8e-24
Identities = 59/88 (67%), Positives = 66/88 (75%), Gaps = 11/88 (12%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSP---- 349
+SPTS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP
Sbjct: 2297 YSPTS-PKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQN 2355
Query: 350 ----GYSP---TSPAYSPTSPSYSPTSP 412
YSP TSP +SPTSP+YS +SP
Sbjct: 2356 IASPNYSPYSITSPKFSPTSPAYSISSP 2383
Score = 105 bits (261), Expect = 2e-21
Identities = 61/113 (53%), Positives = 73/113 (64%), Gaps = 11/113 (9%)
Frame = +2
Query: 92 MMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY 271
+MSP Y ++ + + SPT+ +SPTS P YSP+SP YSP+SP YSPTSP Y
Sbjct: 2285 VMSPVYSVT-SPKYSPTSPK----------YSPTS-PKYSPTSPKYSPTSPKYSPTSPKY 2332
Query: 272 SPTSPGYSPTSPGYSPTSPT-----------YSPSSPGYSPTSPAYSPTSPSY 397
SPTSP YSPTSP YSPTSP YS +SP +SPTSPAYS +SP Y
Sbjct: 2333 SPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSPVY 2385
[181][TOP]
>UniRef100_B4JXA6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
RepID=B4JXA6_DROGR
Length = 1889
Score = 117 bits (293), Expect = 4e-25
Identities = 61/101 (60%), Positives = 71/101 (70%), Gaps = 8/101 (7%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPG--YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSP 307
SPT++ Q SP G S SPG YSPSS YSP+SP YSP SP YSP+SP YSPTSP
Sbjct: 1648 SPTSNFQSSPSFAGSG-SNLYSPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSP 1706
Query: 308 GYSPTSPTYSPSSPGYSPTSPAYSPTSPS------YSPTSP 412
YSPTSP+YSP+SP Y+ +P+YSPTSP+ YSP SP
Sbjct: 1707 CYSPTSPSYSPTSPKYTAVTPSYSPTSPNYSASPHYSPASP 1747
Score = 113 bits (282), Expect = 8e-24
Identities = 59/107 (55%), Positives = 66/107 (61%)
Frame = +2
Query: 92 MMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY 271
+ SP SP+ N +SP SP YSPSSP YSP+SP YSPTSP Y
Sbjct: 1666 LYSPGNAYSPSSSNYSPNSPSYSP----------MSPSYSPSSPSYSPTSPCYSPTSPSY 1715
Query: 272 SPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSP Y+ +P YSPTSP YS +SP YSP SPAYS T YSPTSP
Sbjct: 1716 SPTSPKYTAVTPSYSPTSPNYS-ASPHYSPASPAYSQTGVKYSPTSP 1761
Score = 107 bits (267), Expect = 4e-22
Identities = 69/164 (42%), Positives = 82/164 (50%), Gaps = 44/164 (26%)
Frame = +2
Query: 53 GRSPISGTPYHEGMM--SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT--SSPGYSPSS 220
G SP S +P H G SP +SP SP+ +SP S +SP YSPSS
Sbjct: 1544 GMSP-SWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSS 1602
Query: 221 PGYSPSSPGYSPTSPGYSPTSP-------GYSPTSPGYSPTSP----------------- 328
P YSP+SP Y+ TSP Y+ +P GYSP+S GYSPTSP
Sbjct: 1603 PNYSPTSPLYTATSPRYASATPNFNAQSTGYSPSSSGYSPTSPVYSPTSNFQSSPSFAGS 1662
Query: 329 ----------------TYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSP SP+YSP+SPSYSPTSP
Sbjct: 1663 GSNLYSPGNAYSPSSSNYSPNSPSYSPMSPSYSPSSPSYSPTSP 1706
Score = 107 bits (266), Expect = 5e-22
Identities = 69/154 (44%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Frame = +2
Query: 44 MTPGRSPIS---GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
+TP SP S H SP+Y + ++ SPT+ +SP SP SP Y+P
Sbjct: 1725 VTPSYSPTSPNYSASPHYSPASPAYSQT-GVKYSPTSPT-YSPPSPSYDGSP-GSPQYTP 1781
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPG---------------------------YSPTSPGY 313
SP YSP+SP YSPTSP YSP+SP YSP+S Y
Sbjct: 1782 GSPQYSPASPKYSPTSPLYSPSSPQHSPSNQYSPTGSTYSATSPRYSPNMSIYSPSSTKY 1841
Query: 314 SPTSPTYSPSSPGYSPTSPAYSPTSPS-YSPTSP 412
SPTSPTY+P++ YSPTSP YSPT+PS YSPTSP
Sbjct: 1842 SPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSP 1875
Score = 104 bits (260), Expect = 3e-21
Identities = 62/119 (52%), Positives = 73/119 (61%), Gaps = 14/119 (11%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPS------------- 238
SPSY SP Q+SP +SPTS P YSPSSP +SPS
Sbjct: 1767 SPSYDGSPGSPQYTPGSPQYSP--ASPKYSPTS-PLYSPSSPQHSPSNQYSPTGSTYSAT 1823
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-YSPTSPSYSPTSP 412
SP YSP YSP+S YSPTSP Y+PT+ YSP+SP YSPT+P+ YSPTSP+YSP+SP
Sbjct: 1824 SPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSP 1882
Score = 102 bits (253), Expect = 2e-20
Identities = 61/130 (46%), Positives = 76/130 (58%), Gaps = 8/130 (6%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGM-MSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
MTPG S + + MSPS+ + + SPY SP+ SP YSP+S
Sbjct: 1527 MTPGGPSFSPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPA---SPSVSPSYSPTS 1583
Query: 221 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSP-------GYSPTSPAYS 379
P Y+ SSPG + SP YSP+SP YSPTSP Y+ TSP Y+ ++P GYSP+S YS
Sbjct: 1584 PNYTASSPGGA--SPNYSPSSPNYSPTSPLYTATSPRYASATPNFNAQSTGYSPSSSGYS 1641
Query: 380 PTSPSYSPTS 409
PTSP YSPTS
Sbjct: 1642 PTSPVYSPTS 1651
Score = 99.0 bits (245), Expect = 1e-19
Identities = 64/130 (49%), Positives = 80/130 (61%), Gaps = 2/130 (1%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPIS-GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY DG +PG + G+P + SP Y SP L + Q SP +SP
Sbjct: 1768 PSY-DG-----SPGSPQYTPGSPQYSPA-SPKY--SPTSPLYSPSSPQHSP---SNQYSP 1815
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTS 367
T S YS +SP YSP+ YSP+S YSPTSP Y+PT+ YSPTSP YSP++P YSPTS
Sbjct: 1816 TGST-YSATSPRYSPNMSIYSPSSTKYSPTSPTYTPTARNYSPTSPMYSPTAPSHYSPTS 1874
Query: 368 PAYSPTSPSY 397
PAYSP+SP++
Sbjct: 1875 PAYSPSSPTF 1884
Score = 83.2 bits (204), Expect = 8e-15
Identities = 52/119 (43%), Positives = 64/119 (53%), Gaps = 26/119 (21%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPGY----SPSSPGYSPS--------SPGYSPTSPGYSP 277
+P+ +P+V S PG+ +P P +SPS SP +SP PG SP
Sbjct: 1499 TPSMTPPMTPWVNCHTPRYFSPPGHVSAMTPGGPSFSPSAASDASGMSPSWSPAHPGSSP 1558
Query: 278 TSPG-----YSP----TSPGYSPTSPTYSPSSPG-----YSPTSPAYSPTSPSYSPTSP 412
+SPG Y P SP YSPTSP Y+ SSPG YSP+SP YSPTSP Y+ TSP
Sbjct: 1559 SSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGASPNYSPSSPNYSPTSPLYTATSP 1617
Score = 78.2 bits (191), Expect = 3e-13
Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 6/105 (5%)
Frame = +2
Query: 47 TPGRSPIS-----GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+P SP S +P H SPS SP ++SP M+ SS YS
Sbjct: 1790 SPKYSPTSPLYSPSSPQH----SPSNQYSPTGSTYSATSPRYSP---NMSIYSPSSTKYS 1842
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPG-YSPTSPGYSPTSPTYSPS 343
P+SP Y+P++ YSPTSP YSPT+P YSPTSP YSP+SPT+ S
Sbjct: 1843 PTSPTYTPTARNYSPTSPMYSPTAPSHYSPTSPAYSPSSPTFEES 1887
[182][TOP]
>UniRef100_B3L428 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
RepID=B3L428_PLAKH
Length = 2353
Score = 117 bits (293), Expect = 4e-25
Identities = 64/113 (56%), Positives = 72/113 (63%), Gaps = 8/113 (7%)
Frame = +2
Query: 98 SPSYMLSPNLRL---SPTNDAQF-----SPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYS 253
SP+Y LS N+ S ND + SP +P +S SP Y+ +SP YS
Sbjct: 2140 SPTYHLSSNVNAGGSSGLNDTKAFYSPTSPKNQMDEMNPNMMKYHSVLSPAYAVTSPKYS 2199
Query: 254 PTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y PTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 2200 PTSPKYSPTSPKYMPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSP 2252
Score = 112 bits (279), Expect = 2e-23
Identities = 65/115 (56%), Positives = 79/115 (68%), Gaps = 4/115 (3%)
Frame = +2
Query: 80 YHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 259
YH ++SP+Y ++ + + SPT+ +SPTS P Y P+SP YSP+SP YSPT
Sbjct: 2183 YHS-VLSPAYAVT-SPKYSPTSPK----------YSPTS-PKYMPTSPKYSPTSPKYSPT 2229
Query: 260 SPGYSPTSPGYSPTSPGYSPTSPT-YSPSSPGYSP---TSPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP YSPTSP SPSSP YSP SP +SPTSP+YS +SP
Sbjct: 2230 SPKYSPTSPKYSPTSPQYSPTSPVPNSPSSPHYSPYAIASPKFSPTSPAYSISSP 2284
Score = 62.0 bits (149), Expect = 2e-08
Identities = 63/194 (32%), Positives = 78/194 (40%), Gaps = 64/194 (32%)
Frame = +2
Query: 23 MDGLDFG--MTPGRSPISGTPYHEGMMSP-----SYMLSPNLRL-SPTNDAQFSPYVGGM 178
+D L G +P +SP S T SP L P + L SP N+ S + M
Sbjct: 2032 LDTLKLGGKFSPTQSPRSPTSVIHSPFSPFDNNNQQPLDPGMMLFSPKNNQNNSSSMAMM 2091
Query: 179 ---AFSPTSSPG--YSPSSPGYSPSSPG--YSPTSPGYSPT-SPGYSPT----------- 301
FSP ++ +SP+ YSP+ P +SP + SP YSPT
Sbjct: 2092 NYNVFSPKANLDNIHSPAML-YSPNRPLDIFSPKQQTQNNIYSPSYSPTSPTYHLSSNVN 2150
Query: 302 -------------------------------------SPGYSPTSPTYSPSSPGYSPTSP 370
SP Y+ TSP YSP+SP YSPTSP
Sbjct: 2151 AGGSSGLNDTKAFYSPTSPKNQMDEMNPNMMKYHSVLSPAYAVTSPKYSPTSPKYSPTSP 2210
Query: 371 AYSPTSPSYSPTSP 412
Y PTSP YSPTSP
Sbjct: 2211 KYMPTSPKYSPTSP 2224
Score = 54.7 bits (130), Expect = 3e-06
Identities = 47/124 (37%), Positives = 61/124 (49%), Gaps = 19/124 (15%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSP---SSPGYSPTSP 265
SP Y SP + SPT+ ++SP +SPTS SPSSP YSP +SP +SPTSP
Sbjct: 2223 SPKYSPTSP--KYSPTSP-KYSPT--SPQYSPTSPVPNSPSSPHYSPYAIASPKFSPTSP 2277
Query: 266 GYSPTSPGYSPTSPGYS----PTSPTYSPSSP-----------GYSPTSPAYSPTSPSYS 400
YS +SP Y +S + P SP Y SP +SP A + + +
Sbjct: 2278 AYSISSPVYDQSSNARNRNQHPLSPAYILQSPVQVKQHIQDVSVFSPIQQANADEAQNDD 2337
Query: 401 PTSP 412
P SP
Sbjct: 2338 PFSP 2341
[183][TOP]
>UniRef100_C6F0A4 RNA polymerase II (Fragment) n=2 Tax=Plasmodium (Laverania)
RepID=C6F0A4_PLAFA
Length = 202
Score = 116 bits (291), Expect = 7e-25
Identities = 63/103 (61%), Positives = 68/103 (66%), Gaps = 10/103 (9%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPG----------YSPSSPGYSPSSPGYSPTSPGYSPTS 283
SPT +A + Y SPTS Y+ SP YS +SP YSPTSP YSPTS
Sbjct: 5 SPTYNANNAYY------SPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTS 58
Query: 284 PGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 59 PKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 101
Score = 115 bits (287), Expect = 2e-24
Identities = 64/116 (55%), Positives = 73/116 (62%), Gaps = 11/116 (9%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SP+Y + N SPT+ + + + SP YS +SP YSP+SP YSPTSP YSP
Sbjct: 5 SPTYNAN-NAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSP 63
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP-----------SYSPTSP 412
TSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YS TSP
Sbjct: 64 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSP 119
Score = 113 bits (282), Expect = 8e-24
Identities = 59/88 (67%), Positives = 66/88 (75%), Gaps = 11/88 (12%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSP---- 349
+SPTS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP
Sbjct: 47 YSPTS-PKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQN 105
Query: 350 ----GYSP---TSPAYSPTSPSYSPTSP 412
YSP TSP +SPTSP+YS +SP
Sbjct: 106 IASPNYSPYSITSPKFSPTSPAYSISSP 133
Score = 105 bits (261), Expect = 2e-21
Identities = 61/113 (53%), Positives = 73/113 (64%), Gaps = 11/113 (9%)
Frame = +2
Query: 92 MMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY 271
+MSP Y ++ + + SPT+ +SPTS P YSP+SP YSP+SP YSPTSP Y
Sbjct: 35 VMSPVYSVT-SPKYSPTSPK----------YSPTS-PKYSPTSPKYSPTSPKYSPTSPKY 82
Query: 272 SPTSPGYSPTSPGYSPTSPT-----------YSPSSPGYSPTSPAYSPTSPSY 397
SPTSP YSPTSP YSPTSP YS +SP +SPTSPAYS +SP Y
Sbjct: 83 SPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSPVY 135
Score = 84.7 bits (208), Expect = 3e-15
Identities = 47/94 (50%), Positives = 48/94 (51%), Gaps = 39/94 (41%)
Frame = +2
Query: 248 YSPTSP---------------------------------------GYSPTSPGYSPTSPG 310
YSPTSP YSPTSP YSPTSP
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 311 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 94
[184][TOP]
>UniRef100_UPI000023F34A hypothetical protein FG00916.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023F34A
Length = 1758
Score = 116 bits (290), Expect = 9e-25
Identities = 69/136 (50%), Positives = 82/136 (60%), Gaps = 16/136 (11%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSS-------PGYS 211
G +P+S PY+ G SP SP T+ +SP M +SPTS Y
Sbjct: 1552 GTTPMS--PYNRGAASPFSSTSP------TSPFSYSPTSPNMGYSPTSPLIDGGGMGRYG 1603
Query: 212 PSSPGYSPSSPGYSPTSP---GYSPTSPGYSPTSPGYSPTSPT----YSPSSPGY--SPT 364
P+SP +SPSSP +SPTSP SP SP YSPTSP YSPTSP+ YSP+SP SPT
Sbjct: 1604 PTSPSFSPSSPSFSPTSPMLRPTSPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSPT 1663
Query: 365 SPAYSPTSPSYSPTSP 412
SP+YSP SP+YSPTSP
Sbjct: 1664 SPSYSPASPNYSPTSP 1679
Score = 97.8 bits (242), Expect = 3e-19
Identities = 63/144 (43%), Positives = 77/144 (53%), Gaps = 22/144 (15%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLR-LSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
+P SP S SPSY SP+ SP++ +SP SPTS P YSP+S
Sbjct: 1613 SPSFSPTSPMLRPTSPASPSYSPTSPSYSPTSPSSPRHYSPTSPAQFNSPTS-PSYSPAS 1671
Query: 221 PGYSPSSPG-----------YSPTSPGYSPTSP-GYSPTSPGY--------SPTSPTYSP 340
P YSP+SP YSP SP +SPTSP YSPTSP + SPTSP+YSP
Sbjct: 1672 PNYSPTSPNVHGAGGPTSPSYSPASPSWSPTSPEAYSPTSPTFQRSPTTQQSPTSPSYSP 1731
Query: 341 SSPGYSPTSPAYSPTSPSYSPTSP 412
+SP +SP +P + YSP SP
Sbjct: 1732 TSPAFSPRTPGPGTSGNQYSPNSP 1755
Score = 76.3 bits (186), Expect = 1e-12
Identities = 69/203 (33%), Positives = 88/203 (43%), Gaps = 75/203 (36%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYM---LSPNLRLS-----PTNDAQF----SPYVG 172
G+ + G+ GT + ++ P + +S N R+ PT +PY
Sbjct: 1446 GISENVMLGQMAPMGTGNFDVLLDPKMLETVISDNSRMGLMAGMPTKSGDIEGAATPYDT 1505
Query: 173 GMAFSPTSSPGY----SPSSPGYSP------------------SSPGY------------ 250
G SP + GY SP++ +SP S G+
Sbjct: 1506 G---SPMADSGYLSMSSPAAGNFSPIQGAGSDTPAGFDTVYGGGSVGFGGTTPMSPYNRG 1562
Query: 251 --------SPTSP-GYSPTSP--GYSPTSP--------GYSPTSPTYSPSSPGYSPT--- 364
SPTSP YSPTSP GYSPTSP Y PTSP++SPSSP +SPT
Sbjct: 1563 AASPFSSTSPTSPFSYSPTSPNMGYSPTSPLIDGGGMGRYGPTSPSFSPSSPSFSPTSPM 1622
Query: 365 -------SPAYSPTSPSYSPTSP 412
SP+YSPTSPSYSPTSP
Sbjct: 1623 LRPTSPASPSYSPTSPSYSPTSP 1645
Score = 62.8 bits (151), Expect = 1e-08
Identities = 43/120 (35%), Positives = 58/120 (48%), Gaps = 25/120 (20%)
Frame = +2
Query: 47 TPGRSPIS-GTPYHEGMMSPSYM---LSPNLRLSPTNDAQFSPYVGGM------------ 178
+P SP S +P H SP+ SP+ + N + SP V G
Sbjct: 1637 SPSYSPTSPSSPRHYSPTSPAQFNSPTSPSYSPASPNYSPTSPNVHGAGGPTSPSYSPAS 1696
Query: 179 -AFSPTSSPGYSPSSPGY--------SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT 331
++SPTS YSP+SP + SP+SP YSPTSP +SP +PG + YSP SP+
Sbjct: 1697 PSWSPTSPEAYSPTSPTFQRSPTTQQSPTSPSYSPTSPAFSPRTPGPGTSGNQYSPNSPS 1756
[185][TOP]
>UniRef100_Q7SDN0 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q7SDN0_NEUCR
Length = 1752
Score = 116 bits (290), Expect = 9e-25
Identities = 71/135 (52%), Positives = 85/135 (62%), Gaps = 17/135 (12%)
Frame = +2
Query: 59 SPISGT-PYHEGMMSPSYMLSPNLRLSPTNDA--------QFSPYVGGMAFSPTSS---P 202
SP + T P+ G SPS + SP D+ QFSP +FSPTS P
Sbjct: 1572 SPFTPTSPFSYGGYSPSSPAAGYSPSSPLLDSAGRFASSPQFSP--SSPSFSPTSPMLRP 1629
Query: 203 GYSPSSPGYSPSSPGYSPTSPG---YSPTSPG--YSPTSPGYSPTSPTYSPSSPGYSPTS 367
G SP+SP YSP+SP YSP SP YSPTSP +SPTSP YSPTSP+YSP+SP + TS
Sbjct: 1630 G-SPTSPSYSPTSPSYSPASPAAARYSPTSPAQQFSPTSPSYSPTSPSYSPASPAFQATS 1688
Query: 368 PAYSPTSPSYSPTSP 412
P+YSP SP++SPTSP
Sbjct: 1689 PSYSPASPTWSPTSP 1703
Score = 108 bits (271), Expect = 1e-22
Identities = 66/127 (51%), Positives = 78/127 (61%), Gaps = 5/127 (3%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S SPSY SP+ + A++SP FSPTS P YSP+SP
Sbjct: 1617 SPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAAARYSPTSPAQQFSPTS-PSYSPTSP 1675
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSP-GYSPTSPTYSPSSPG--YSPTSP-AYSPTSP 391
YSP+SP + TSP YSP SP +SPTSP YSPTSP++ SPG SPTSP YSPTSP
Sbjct: 1676 SYSPASPAFQATSPSYSPASPTWSPTSPDAYSPTSPSFQ-RSPGQQLSPTSPTGYSPTSP 1734
Query: 392 SYSPTSP 412
YSP +P
Sbjct: 1735 QYSPRTP 1741
Score = 84.7 bits (208), Expect = 3e-15
Identities = 70/158 (44%), Positives = 84/158 (53%), Gaps = 30/158 (18%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG--TPYHEGM-MSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSS 199
GL GMT S + G TPY G M+ S L SPT FSP G + SPT++
Sbjct: 1489 GLMPGMTVKGSQLDGAATPYDTGSPMADSGFLGS---YSPTM-GNFSPIQGAGSDSPTNN 1544
Query: 200 P---------GYSPSSPGYSPSSPG----YSPTSP----GYSPTSP--GYSPTSP----- 307
GY + S +SP ++PTSP GYSP+SP GYSP+SP
Sbjct: 1545 GFGTDYGGVGGYGSGTSYSSATSPRATSPFTPTSPFSYGGYSPSSPAAGYSPSSPLLDSA 1604
Query: 308 GYSPTSPTYSPSSPGYSPTSPAY---SPTSPSYSPTSP 412
G +SP +SPSSP +SPTSP SPTSPSYSPTSP
Sbjct: 1605 GRFASSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSP 1642
Score = 62.8 bits (151), Expect = 1e-08
Identities = 52/121 (42%), Positives = 60/121 (49%), Gaps = 33/121 (27%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNL-RLSPTNDAQ-FSPYVGGMAFSPTS------- 196
+P P S T SPSY SP R SPT+ AQ FSP ++SPTS
Sbjct: 1624 SPMLRPGSPTSPSYSPTSPSYSPASPAAARYSPTSPAQQFSPT--SPSYSPTSPSYSPAS 1681
Query: 197 ------SPGYSPSSPGYSPSSP-GYSPTSP----------------GYSPTSPGYSPTSP 307
SP YSP+SP +SP+SP YSPTSP GYSPTSP YSP +P
Sbjct: 1682 PAFQATSPSYSPASPTWSPTSPDAYSPTSPSFQRSPGQQLSPTSPTGYSPTSPQYSPRTP 1741
Query: 308 G 310
G
Sbjct: 1742 G 1742
[186][TOP]
>UniRef100_B2AA31 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2AA31_PODAN
Length = 1748
Score = 116 bits (290), Expect = 9e-25
Identities = 75/149 (50%), Positives = 87/149 (58%), Gaps = 24/149 (16%)
Frame = +2
Query: 38 FGMTPGR-------SPISGTPYHEGMMSPSYMLSPNLRLSPTNDA--------QFSPYVG 172
+ +PGR SP S Y SP+ SP SP DA QFSP
Sbjct: 1559 YATSPGRPTSPFTTSPTSPFSYGYSPTSPAAGYSPT---SPLIDAGGRFASSPQFSP--S 1613
Query: 173 GMAFSPTSS---PGYSPSSPGYSPSSPGYSPTSPG----YSPTSPGY--SPTSPGYSPTS 325
+FSPTS PG SP+SP YSP+SP YSP SP YSPTSP SPTSP YSPTS
Sbjct: 1614 SPSFSPTSPMLRPG-SPTSPSYSPTSPSYSPASPAATRHYSPTSPAQFQSPTSPSYSPTS 1672
Query: 326 PTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+YSP+SP + TSP+YSP SP++SPTSP
Sbjct: 1673 PSYSPASPAFQATSPSYSPASPNWSPTSP 1701
Score = 110 bits (276), Expect = 4e-23
Identities = 67/127 (52%), Positives = 77/127 (60%), Gaps = 5/127 (3%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLR-LSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
+P SP S SPSY SP+ SP +SP SPTS P YSP+S
Sbjct: 1614 SPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASPAATRHYSPTSPAQFQSPTS-PSYSPTS 1672
Query: 221 PGYSPSSPGYSPTSPGYSPTSPGYSPTSP-GYSPTSPTYSPSSPG--YSPTSPAYSPTSP 391
P YSP+SP + TSP YSP SP +SPTSP YSPTSPT+ SPG SPTSP YSPTSP
Sbjct: 1673 PSYSPASPAFQATSPSYSPASPNWSPTSPDAYSPTSPTFQ-RSPGQQMSPTSPGYSPTSP 1731
Query: 392 SYSPTSP 412
S+SP +P
Sbjct: 1732 SFSPRTP 1738
Score = 87.8 bits (216), Expect = 3e-16
Identities = 72/164 (43%), Positives = 85/164 (51%), Gaps = 36/164 (21%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG--TPYHEGM-MSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS- 196
GL GMT + + G TPY G M+ + L + SPT FSP VG + P
Sbjct: 1486 GLMAGMTIKGNQLEGAATPYDTGSPMADNGYLGGSY--SPTM-GNFSPIVGNESGGPPGF 1542
Query: 197 -----SPGYSPSSPGYSPSSPGY-------SPTSP---GYSPTSP--GYSPT-------- 301
GY SS +SPG SPTSP GYSPTSP GYSPT
Sbjct: 1543 ASEYGGGGYGSSSVNPYATSPGRPTSPFTTSPTSPFSYGYSPTSPAAGYSPTSPLIDAGG 1602
Query: 302 ----SPGYSPTSPTYSPSSPGY---SPTSPAYSPTSPSYSPTSP 412
SP +SP+SP++SP+SP SPTSP+YSPTSPSYSP SP
Sbjct: 1603 RFASSPQFSPSSPSFSPTSPMLRPGSPTSPSYSPTSPSYSPASP 1646
Score = 84.7 bits (208), Expect = 3e-15
Identities = 56/120 (46%), Positives = 68/120 (56%), Gaps = 18/120 (15%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSP--NLRLSPTNDAQFSPYVGGMAFSPTS------S 199
+P P S T SPSY SP SPT+ AQF ++SPTS S
Sbjct: 1621 SPMLRPGSPTSPSYSPTSPSYSPASPAATRHYSPTSPAQFQSPTSP-SYSPTSPSYSPAS 1679
Query: 200 PGYSPSSPGYSPSSPGYSPTSP-GYSPTSPGY--------SPTSPGYSPTSPTYSPSSPG 352
P + +SP YSP+SP +SPTSP YSPTSP + SPTSPGYSPTSP++SP +PG
Sbjct: 1680 PAFQATSPSYSPASPNWSPTSPDAYSPTSPTFQRSPGQQMSPTSPGYSPTSPSFSPRTPG 1739
Score = 73.9 bits (180), Expect = 5e-12
Identities = 48/112 (42%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Frame = +2
Query: 47 TPGRSPIS-GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S H SP+ SP +SP AF TS P YSP+SP
Sbjct: 1638 SPSYSPASPAATRHYSPTSPAQFQSPTSPSYSPTSPSYSP--ASPAFQATS-PSYSPASP 1694
Query: 224 GYSPSSP-GYSPTSPGY--------SPTSPGYSPTSPGYSPTSPTYSPSSPG 352
+SP+SP YSPTSP + SPTSPGYSPTSP +SP +P + S G
Sbjct: 1695 NWSPTSPDAYSPTSPTFQRSPGQQMSPTSPGYSPTSPSFSPRTPGRAAGSGG 1746
[187][TOP]
>UniRef100_C6F1F0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F0_PLAVI
Length = 218
Score = 115 bits (287), Expect = 2e-24
Identities = 60/95 (63%), Positives = 70/95 (73%), Gaps = 2/95 (2%)
Frame = +2
Query: 134 SPTNDA-QFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPG 310
SPTN + +P + M + SP YS +SP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 33 SPTNQLDEVNPNM--MKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPK 90
Query: 311 YSPTSPTYSPSSPGYSPTSPAYSPTSP-SYSPTSP 412
YSPTSP YSP+SP YSPTSP YSP+SP +P+SP
Sbjct: 91 YSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSP 125
Score = 111 bits (278), Expect = 2e-23
Identities = 69/135 (51%), Positives = 86/135 (63%), Gaps = 15/135 (11%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSYML---SPNLR-----LSPT---NDAQFSPYVGGMAFSPTSS 199
G S ++GT + SP+ L +PN+ +SP ++SP +SPTS
Sbjct: 18 GSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPT--SPKYSPTS- 74
Query: 200 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT-YSPSSPGYSP---TS 367
P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSP+SP +PSSP YSP S
Sbjct: 75 PKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIAS 134
Query: 368 PAYSPTSPSYSPTSP 412
P +SPTSP+YS +SP
Sbjct: 135 PKFSPTSPAYSISSP 149
Score = 89.7 bits (221), Expect = 9e-17
Identities = 61/133 (45%), Positives = 77/133 (57%), Gaps = 22/133 (16%)
Frame = +2
Query: 80 YHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 259
YH ++SP Y ++ + + SPT+ ++SP +SPTS P YSP+SP YSP+SP YSPT
Sbjct: 48 YHS-VVSPVYSVT-SPKYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPT 101
Query: 260 SPGYSPTSPGYSPTSP------------------GYSPTSPTYSPSSPGYSPTSPAYS-- 379
SP YSPTSP YSP+SP +SPTSP YS SSP Y + A S
Sbjct: 102 SPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISSPVYDQSGNARSKS 161
Query: 380 --PTSPSYSPTSP 412
P SP+Y SP
Sbjct: 162 QHPLSPAYILQSP 174
Score = 89.4 bits (220), Expect = 1e-16
Identities = 51/104 (49%), Positives = 56/104 (53%), Gaps = 27/104 (25%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP---------------------------T 280
+SPTS P Y ++P S G + T YSP T
Sbjct: 1 YSPTS-PTYHLTNPASGGGSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVT 59
Query: 281 SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 60 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 103
[188][TOP]
>UniRef100_C6F0A3 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0A3_PLAFA
Length = 195
Score = 114 bits (285), Expect = 3e-24
Identities = 63/116 (54%), Positives = 73/116 (62%), Gaps = 11/116 (9%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SP+Y + N SPT+ + + + SP YS +SP YSP+SP YSPTSP YSP
Sbjct: 5 SPTYNAN-NAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSP 63
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA-----------YSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP YSP+SP YSPTSP YS TSP +SPTSP
Sbjct: 64 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSP 119
Score = 110 bits (276), Expect = 4e-23
Identities = 56/84 (66%), Positives = 63/84 (75%), Gaps = 11/84 (13%)
Frame = +2
Query: 194 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSP-------- 349
+SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YSP+SP
Sbjct: 43 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASP 102
Query: 350 GYSP---TSPAYSPTSPSYSPTSP 412
YSP TSP +SPTSP+YS +SP
Sbjct: 103 NYSPYSITSPKFSPTSPAYSISSP 126
Score = 108 bits (271), Expect = 1e-22
Identities = 58/94 (61%), Positives = 63/94 (67%), Gaps = 17/94 (18%)
Frame = +2
Query: 182 FSPTS------SPGYSPSSPG-----------YSPSSPGYSPTSPGYSPTSPGYSPTSPG 310
+SPTS + YSP+SP Y+ SP YS TSP YSPTSP YSPTSP
Sbjct: 1 YSPTSPTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPK 60
Query: 311 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 61 YSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 94
Score = 103 bits (257), Expect = 6e-21
Identities = 54/83 (65%), Positives = 60/83 (72%), Gaps = 11/83 (13%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT---------- 331
+SPTS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP
Sbjct: 47 YSPTS-PKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYS 105
Query: 332 -YSPSSPGYSPTSPAYSPTSPSY 397
YS +SP +SPTSPAYS +SP Y
Sbjct: 106 PYSITSPKFSPTSPAYSISSPVY 128
Score = 80.9 bits (198), Expect = 4e-14
Identities = 54/120 (45%), Positives = 68/120 (56%), Gaps = 20/120 (16%)
Frame = +2
Query: 92 MMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY 271
+MSP Y ++ + + SPT+ ++SP +SPTS P YSP+SP YSP+SP YSPTSP Y
Sbjct: 35 VMSPVYSVT-SPKYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPTSPKY 89
Query: 272 SPTSP------------------GYSPTSPGYSPTSPTYSPSS--PGYSPTSPAYSPTSP 391
SPTSP +SPTSP YS +SP Y S + P SPAY SP
Sbjct: 90 SPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSPVYDKSGVVNAHQPMSPAYILQSP 149
[189][TOP]
>UniRef100_C6F1F1 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F1_PLAVI
Length = 211
Score = 110 bits (276), Expect = 4e-23
Identities = 68/129 (52%), Positives = 83/129 (64%), Gaps = 9/129 (6%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSYML---SPNLRLSPTNDAQFSPY--VGGMAFSPTSSPGYSPS 217
G S ++GT + SP+ L +PN+ + SP V +SPTS P YSP+
Sbjct: 18 GSSGLNGTKAYYSPTSPTNQLDEVNPNMM---KYHSVVSPVYSVTSPKYSPTS-PKYSPT 73
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT-YSPSSPGYSP---TSPAYSPT 385
SP YSP+SP YSPTSP YSPTSP YSPTSP YSP+SP +PSSP YSP SP +SPT
Sbjct: 74 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFSPT 133
Query: 386 SPSYSPTSP 412
SP+YS +SP
Sbjct: 134 SPAYSISSP 142
Score = 104 bits (260), Expect = 3e-21
Identities = 58/106 (54%), Positives = 64/106 (60%), Gaps = 13/106 (12%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG-------------YSPSSPGYSPTSPGYS 274
SPT GG + + YSP+SP +S SP YS TSP YS
Sbjct: 5 SPTYHLTNPASGGGSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYS 64
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSP+SP
Sbjct: 65 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSP 110
Score = 89.4 bits (220), Expect = 1e-16
Identities = 51/104 (49%), Positives = 56/104 (53%), Gaps = 27/104 (25%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP---------------------------T 280
+SPTS P Y ++P S G + T YSP T
Sbjct: 1 YSPTS-PTYHLTNPASGGGSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVT 59
Query: 281 SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 60 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 103
Score = 78.6 bits (192), Expect = 2e-13
Identities = 55/126 (43%), Positives = 70/126 (55%), Gaps = 22/126 (17%)
Frame = +2
Query: 80 YHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 259
YH ++SP Y ++ + + SPT+ ++SP +SPTS P YSP+SP YSP+SP YSPT
Sbjct: 48 YHS-VVSPVYSVT-SPKYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPT 101
Query: 260 SPGYSPTSP------------------GYSPTSPGYSPTSPTYSPS----SPGYSPTSPA 373
SP YSP+SP +SPTSP YS +SP Y S S P SPA
Sbjct: 102 SPQYSPSSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISSPVYDQSGNARSKSQHPLSPA 161
Query: 374 YSPTSP 391
Y SP
Sbjct: 162 YILQSP 167
[190][TOP]
>UniRef100_A5K7P4 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
RepID=A5K7P4_PLAVI
Length = 2379
Score = 110 bits (276), Expect = 4e-23
Identities = 68/129 (52%), Positives = 83/129 (64%), Gaps = 9/129 (6%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSYML---SPNLRLSPTNDAQFSPY--VGGMAFSPTSSPGYSPS 217
G S ++GT + SP+ L +PN+ + SP V +SPTS P YSP+
Sbjct: 2186 GSSGLNGTKAYYSPTSPTNQLDEVNPNMM---KYHSVVSPVYSVTSPKYSPTS-PKYSPT 2241
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT-YSPSSPGYSP---TSPAYSPT 385
SP YSP+SP YSPTSP YSPTSP YSPTSP YSP+SP +PSSP YSP SP +SPT
Sbjct: 2242 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFSPT 2301
Query: 386 SPSYSPTSP 412
SP+YS +SP
Sbjct: 2302 SPAYSISSP 2310
Score = 108 bits (269), Expect = 2e-22
Identities = 69/143 (48%), Positives = 79/143 (55%), Gaps = 36/143 (25%)
Frame = +2
Query: 92 MMSPSYMLSPNLRL---SPTNDAQFSPYVGGMAFSPTS-------------SPG------ 205
+ SP+ + SPN L SP Q + Y ++SPTS S G
Sbjct: 2138 IQSPAMLYSPNRALDLFSPKQQTQNNIY--SPSYSPTSPTYHLTNPASGGGSSGLNGTKA 2195
Query: 206 -YSPSSPG-------------YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPS 343
YSP+SP +S SP YS TSP YSPTSP YSPTSP YSPTSP YSP+
Sbjct: 2196 YYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKYSPTSPKYSPTSPKYSPTSPKYSPT 2255
Query: 344 SPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP YSP+SP
Sbjct: 2256 SPKYSPTSPKYSPTSPQYSPSSP 2278
Score = 78.6 bits (192), Expect = 2e-13
Identities = 55/126 (43%), Positives = 70/126 (55%), Gaps = 22/126 (17%)
Frame = +2
Query: 80 YHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 259
YH ++SP Y ++ + + SPT+ ++SP +SPTS P YSP+SP YSP+SP YSPT
Sbjct: 2216 YHS-VVSPVYSVT-SPKYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPT 2269
Query: 260 SPGYSPTSP------------------GYSPTSPGYSPTSPTYSPS----SPGYSPTSPA 373
SP YSP+SP +SPTSP YS +SP Y S S P SPA
Sbjct: 2270 SPQYSPSSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISSPVYDQSGNARSKSQHPLSPA 2329
Query: 374 YSPTSP 391
Y SP
Sbjct: 2330 YILQSP 2335
[191][TOP]
>UniRef100_Q2HDK0 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
RepID=Q2HDK0_CHAGB
Length = 1756
Score = 110 bits (275), Expect = 5e-23
Identities = 70/159 (44%), Positives = 82/159 (51%), Gaps = 45/159 (28%)
Frame = +2
Query: 71 GTPYHEGMMSPS---YMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP--------- 214
GT Y G S + Y SP SP + + SP+ G +SPTS GYSP
Sbjct: 1542 GTEYGGGFGSSTVNPYATSPRAT-SPFSTSPTSPFSYGGGYSPTSPAGYSPTSPLLDAGG 1600
Query: 215 ---SSPGYSPSSPGYSPTSP----------GYSPTSPGYSP------------------- 298
SSP +SPSSP +SPTSP YSPTSP YSP
Sbjct: 1601 RYASSPQFSPSSPSFSPTSPMLRPGSPTSPNYSPTSPSYSPASPAATRHYSPTSPQQFNS 1660
Query: 299 -TSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP YSPTSP+YSP+SP TSP+YSP SP++SPTSP
Sbjct: 1661 PTSPSYSPTSPSYSPASPNLHATSPSYSPASPTWSPTSP 1699
Score = 107 bits (266), Expect = 5e-22
Identities = 68/141 (48%), Positives = 80/141 (56%), Gaps = 19/141 (13%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P P S T + SPSY SP SP +SP SPTS P YSP+SP
Sbjct: 1619 SPMLRPGSPTSPNYSPTSPSY--SP---ASPAATRHYSPTSPQQFNSPTS-PSYSPTSPS 1672
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSP-GYSPTSPTY--------SPSSPGYSPTSPAYS 379
YSP+SP TSP YSP SP +SPTSP YSPTSP++ SP+SPGYSPTSP++S
Sbjct: 1673 YSPASPNLHATSPSYSPASPTWSPTSPDAYSPTSPSFHRSPGQQMSPTSPGYSPTSPSFS 1732
Query: 380 PTSP----------SYSPTSP 412
P +P YSPTSP
Sbjct: 1733 PRTPGRGPSGGSGDQYSPTSP 1753
Score = 70.5 bits (171), Expect = 6e-11
Identities = 45/91 (49%), Positives = 53/91 (58%), Gaps = 13/91 (14%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGY--SPTSPG 268
SPSY SPNL + + + SP +SPTS YSP+SP + SPG SPTSPG
Sbjct: 1670 SPSYSPASPNLHATSPSYSPASP-----TWSPTSPDAYSPTSPSFH-RSPGQQMSPTSPG 1723
Query: 269 YSPTSPGYSPTSPG----------YSPTSPT 331
YSPTSP +SP +PG YSPTSPT
Sbjct: 1724 YSPTSPSFSPRTPGRGPSGGSGDQYSPTSPT 1754
Score = 53.9 bits (128), Expect = 5e-06
Identities = 53/134 (39%), Positives = 61/134 (45%), Gaps = 19/134 (14%)
Frame = +2
Query: 68 SGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS-SPGYSPSSP 244
+ TPY G SP SPT FSP G + SP G+ G+ S+
Sbjct: 1501 AATPYDTG--SPMADNGHLGSYSPTM-GNFSPIQGAGSDSPN---GFGTEYGGGFGSSTV 1554
Query: 245 GYSPTSPGYSPTSP-GYSPTSP-----GYSPTSPTYSPSSPGYSPT------------SP 370
TSP TSP SPTSP GYSPTSP GYSPT SP
Sbjct: 1555 NPYATSP--RATSPFSTSPTSPFSYGGGYSPTSPA------GYSPTSPLLDAGGRYASSP 1606
Query: 371 AYSPTSPSYSPTSP 412
+SP+SPS+SPTSP
Sbjct: 1607 QFSPSSPSFSPTSP 1620
[192][TOP]
>UniRef100_C9SR21 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SR21_9PEZI
Length = 1756
Score = 110 bits (275), Expect = 5e-23
Identities = 73/150 (48%), Positives = 85/150 (56%), Gaps = 22/150 (14%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS-SPG 205
G ++G T G +P G SP SPT+ FS + G +SPTS G
Sbjct: 1538 GTEYGGTYGGFG-GASPGRAGATSP-------FTTSPTSP--FSSFAGAGGYSPTSPGGG 1587
Query: 206 YSPSSP------------GYSPSSPGYSPTSPGY---SPTSPGYSPTSPGYSPTSPT--- 331
YSP+SP +SPSSP +SPTSP + SP SP YSPTSP YSPTSPT
Sbjct: 1588 YSPTSPLMDGGARYATSPQFSPSSPSFSPTSPVHRPTSPASPNYSPTSPSYSPTSPTSPR 1647
Query: 332 -YSPSSPGY--SPTSPAYSPTSPSYSPTSP 412
YSP+SP SPTSP+YSP SPSYSPTSP
Sbjct: 1648 HYSPTSPAQFNSPTSPSYSPASPSYSPTSP 1677
Score = 106 bits (265), Expect = 7e-22
Identities = 69/137 (50%), Positives = 84/137 (61%), Gaps = 15/137 (10%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPY--VGGMAFSPTSSPGY-SPS 217
+P SP S P H P+ SPN SPT+ + +SP +SPTS + SP+
Sbjct: 1611 SPSFSPTS--PVHR----PTSPASPNY--SPTSPS-YSPTSPTSPRHYSPTSPAQFNSPT 1661
Query: 218 SPGYSPSSPGYSPTSP---GYSPTSPGYSPTSPGYSPTSP--TYSPSSPGY-------SP 361
SP YSP+SP YSPTSP G PTSP YSP SP +SPTSP +YSP+SP + SP
Sbjct: 1662 SPSYSPASPSYSPTSPNLHGAGPTSPSYSPASPSWSPTSPEHSYSPTSPSFQRPAMQQSP 1721
Query: 362 TSPAYSPTSPSYSPTSP 412
TSP YSPTSPS+SP +P
Sbjct: 1722 TSPNYSPTSPSFSPRTP 1738
Score = 105 bits (261), Expect = 2e-21
Identities = 64/130 (49%), Positives = 77/130 (59%), Gaps = 12/130 (9%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
+P P S + SPSY SP SPT+ +SP SPTS P YSP+SP
Sbjct: 1618 SPVHRPTSPASPNYSPTSPSY--SPT---SPTSPRHYSPTSPAQFNSPTS-PSYSPASPS 1671
Query: 227 YSPSSP---GYSPTSPGYSPTSPGYSPTSP--GYSPTSPTY-------SPSSPGYSPTSP 370
YSP+SP G PTSP YSP SP +SPTSP YSPTSP++ SP+SP YSPTSP
Sbjct: 1672 YSPTSPNLHGAGPTSPSYSPASPSWSPTSPEHSYSPTSPSFQRPAMQQSPTSPNYSPTSP 1731
Query: 371 AYSPTSPSYS 400
++SP +P S
Sbjct: 1732 SFSPRTPGPS 1741
[193][TOP]
>UniRef100_C6F1F6 RNA polymerase II (Fragment) n=1 Tax=Plasmodium vivax
RepID=C6F1F6_PLAVI
Length = 211
Score = 109 bits (272), Expect = 1e-22
Identities = 68/129 (52%), Positives = 82/129 (63%), Gaps = 9/129 (6%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSYML---SPNLRLSPTNDAQFSPY--VGGMAFSPTSSPGYSPS 217
G S ++GT + SP+ L +PN+ + SP V SPTS P YSP+
Sbjct: 18 GSSGLNGTKAYYSPTSPTNQLDEVNPNMM---KYHSVVSPVYSVTSPKXSPTS-PKYSPT 73
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT-YSPSSPGYSP---TSPAYSPT 385
SP YSP+SP YSPTSP YSPTSP YSPTSP YSP+SP +PSSP YSP SP +SPT
Sbjct: 74 SPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSPVPNNPSSPHYSPYAIASPKFSPT 133
Query: 386 SPSYSPTSP 412
SP+YS +SP
Sbjct: 134 SPAYSISSP 142
Score = 101 bits (252), Expect = 2e-20
Identities = 57/106 (53%), Positives = 63/106 (59%), Gaps = 13/106 (12%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG-------------YSPSSPGYSPTSPGYS 274
SPT GG + + YSP+SP +S SP YS TSP S
Sbjct: 5 SPTYHLTNPASGGGSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVTSPKXS 64
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSP+SP
Sbjct: 65 PTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPQYSPSSP 110
Score = 86.3 bits (212), Expect = 1e-15
Identities = 50/104 (48%), Positives = 55/104 (52%), Gaps = 27/104 (25%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP---------------------------T 280
+SPTS P Y ++P S G + T YSP T
Sbjct: 1 YSPTS-PTYHLTNPASGGGSSGLNGTKAYYSPTSPTNQLDEVNPNMMKYHSVVSPVYSVT 59
Query: 281 SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP SPTSP YSPTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 60 SPKXSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSP 103
Score = 78.6 bits (192), Expect = 2e-13
Identities = 55/126 (43%), Positives = 70/126 (55%), Gaps = 22/126 (17%)
Frame = +2
Query: 80 YHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 259
YH ++SP Y ++ + + SPT+ ++SP +SPTS P YSP+SP YSP+SP YSPT
Sbjct: 48 YHS-VVSPVYSVT-SPKXSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPT 101
Query: 260 SPGYSPTSP------------------GYSPTSPGYSPTSPTYSPS----SPGYSPTSPA 373
SP YSP+SP +SPTSP YS +SP Y S S P SPA
Sbjct: 102 SPQYSPSSPVPNNPSSPHYSPYAIASPKFSPTSPAYSISSPVYDQSGNARSKSQHPLSPA 161
Query: 374 YSPTSP 391
Y SP
Sbjct: 162 YILQSP 167
[194][TOP]
>UniRef100_C6F0B0 RNA polymerase II (Fragment) n=1 Tax=Plasmodium falciparum
RepID=C6F0B0_PLAFA
Length = 188
Score = 109 bits (272), Expect = 1e-22
Identities = 62/116 (53%), Positives = 74/116 (63%), Gaps = 11/116 (9%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SP+Y + N SPT+ + + + SP YS +SP YSP+SP YSPTSP YSP
Sbjct: 5 SPTYNAN-NAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSPKYSP 63
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSP--------GYSP---TSPAYSPTSPSYSPTSP 412
TSP YSPTSP YSPTSP YSP+SP YSP TSP +SPTSP+YS +SP
Sbjct: 64 TSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSITSPKFSPTSPAYSISSP 119
Score = 103 bits (257), Expect = 6e-21
Identities = 54/88 (61%), Positives = 61/88 (69%), Gaps = 11/88 (12%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPG-----------YSPTSPGYSPTSPGYSPTSPGYSPTSP 328
+SPTS P Y+ ++ YSP+SP Y+ SP YS TSP YSPTSP YSPTSP
Sbjct: 1 YSPTS-PTYNANNAYYSPTSPKNQNDQMNVNSQYNVMSPVYSVTSPKYSPTSPKYSPTSP 59
Query: 329 TYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 60 KYSPTSPKYSPTSPKYSPTSPKYSPTSP 87
Score = 101 bits (251), Expect = 3e-20
Identities = 51/79 (64%), Positives = 57/79 (72%), Gaps = 11/79 (13%)
Frame = +2
Query: 194 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT-----------YSP 340
+SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP YS
Sbjct: 43 TSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPKYSPTSPVAQNIASPNYSPYSI 102
Query: 341 SSPGYSPTSPAYSPTSPSY 397
+SP +SPTSPAYS +SP Y
Sbjct: 103 TSPKFSPTSPAYSISSPVY 121
Score = 80.1 bits (196), Expect = 7e-14
Identities = 54/113 (47%), Positives = 68/113 (60%), Gaps = 13/113 (11%)
Frame = +2
Query: 92 MMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSP-- 265
+MSP Y ++ + + SPT+ ++SP +SPTS P YSP+SP YSP+SP YSPTSP
Sbjct: 35 VMSPVYSVT-SPKYSPTSP-KYSPT--SPKYSPTS-PKYSPTSPKYSPTSPKYSPTSPVA 89
Query: 266 ------GYSP---TSPGYSPTSPGYSPTSPTYSPSS--PGYSPTSPAYSPTSP 391
YSP TSP +SPTSP YS +SP Y S + P SPAY SP
Sbjct: 90 QNIASPNYSPYSITSPKFSPTSPAYSISSPVYDKSGVVNAHQPMSPAYILQSP 142
[195][TOP]
>UniRef100_C6F1F5 RNA polymerase II (Fragment) n=1 Tax=Plasmodium fragile
RepID=C6F1F5_PLAFR
Length = 210
Score = 107 bits (268), Expect = 3e-22
Identities = 56/81 (69%), Positives = 63/81 (77%), Gaps = 4/81 (4%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP-TYSPSSPGYS 358
+SPTS P YSP+SP Y P+SP YSPTSP YSPTSP YSPTSP YSPTSP +PSSP YS
Sbjct: 63 YSPTS-PKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSPIPNNPSSPHYS 121
Query: 359 P---TSPAYSPTSPSYSPTSP 412
P SP +SPTSP+YS +SP
Sbjct: 122 PYAIASPKFSPTSPAYSISSP 142
Score = 107 bits (267), Expect = 4e-22
Identities = 59/106 (55%), Positives = 63/106 (59%), Gaps = 13/106 (12%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG-------------YSPSSPGYSPTSPGYS 274
SPT + GG A YSP+SP +S SP YS TSP YS
Sbjct: 5 SPTYHLSNNANAGGSAGLNDPKSFYSPTSPTNQLGEMNPNMMKYHSVVSPVYSVTSPKYS 64
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTSP YSPTSP Y PTSP YSP+SP YSPTSP YSPTSP YSPTSP
Sbjct: 65 PTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSPQYSPTSP 110
Score = 85.5 bits (210), Expect = 2e-15
Identities = 58/133 (43%), Positives = 73/133 (54%), Gaps = 22/133 (16%)
Frame = +2
Query: 80 YHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPT 259
YH ++SP Y ++ + + SPT+ +SPTS P Y P+SP YSP+SP YSPT
Sbjct: 48 YHS-VVSPVYSVT-SPKYSPTSPK----------YSPTS-PQYMPTSPKYSPTSPKYSPT 94
Query: 260 SPGYSPTSPGYSPTSP------------------GYSPTSPTYSPSSPGYSPTSPAYS-- 379
SP YSPTSP YSPTSP +SPTSP YS SSP Y ++ A +
Sbjct: 95 SPKYSPTSPQYSPTSPIPNNPSSPHYSPYAIASPKFSPTSPAYSISSPVYDRSANARNKN 154
Query: 380 --PTSPSYSPTSP 412
P SP+Y SP
Sbjct: 155 QHPLSPAYILQSP 167
Score = 83.6 bits (205), Expect = 6e-15
Identities = 49/104 (47%), Positives = 54/104 (51%), Gaps = 27/104 (25%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP---------------------------T 280
+SPTS P Y S+ + S G + YSP T
Sbjct: 1 YSPTS-PTYHLSNNANAGGSAGLNDPKSFYSPTSPTNQLGEMNPNMMKYHSVVSPVYSVT 59
Query: 281 SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP Y P+SP YSPTSP YSPTSP YSPTSP
Sbjct: 60 SPKYSPTSPKYSPTSPQYMPTSPKYSPTSPKYSPTSPKYSPTSP 103
[196][TOP]
>UniRef100_C7YI77 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
RepID=C7YI77_NECH7
Length = 1750
Score = 106 bits (265), Expect = 7e-22
Identities = 77/164 (46%), Positives = 84/164 (51%), Gaps = 39/164 (23%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYH------EGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS- 196
FG G SP S Y +G M Y SP+ S + + SP V PTS
Sbjct: 1568 FGPGGGYSPTSPNAYSPTSPLVDGGMGGRYATSPSFSPSSPSFSPTSPMV-----RPTSP 1622
Query: 197 -SPGYSPSSPGY---SPSSPGY----------SPTSPGYSPTSPGYSP----------TS 304
SP YSPSSP Y SPSSP + SPTSP YSP SP YSP TS
Sbjct: 1623 ASPNYSPSSPNYSPASPSSPRHYSPTSPAQFNSPTSPNYSPASPNYSPASPNLHAGGTTS 1682
Query: 305 PGYSPTSPTYSPSSP-GYSPTSP-------AYSPTSPSYSPTSP 412
P YSP SPT+SP+SP YSPTSP SPTSPSYSPTSP
Sbjct: 1683 PSYSPASPTWSPTSPEAYSPTSPYQRSPGAQQSPTSPSYSPTSP 1726
Score = 97.1 bits (240), Expect = 6e-19
Identities = 63/142 (44%), Positives = 76/142 (53%), Gaps = 20/142 (14%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYM-LSPNLR-LSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
+P SP S SP+Y SPN SP++ +SP SPTS P YSP+S
Sbjct: 1607 SPSFSPTSPMVRPTSPASPNYSPSSPNYSPASPSSPRHYSPTSPAQFNSPTS-PNYSPAS 1665
Query: 221 PGYSPSSPG----------YSPTSPGYSPTSP-GYSPTSP-------GYSPTSPTYSPSS 346
P YSP+SP YSP SP +SPTSP YSPTSP SPTSP+YSP+S
Sbjct: 1666 PNYSPASPNLHAGGTTSPSYSPASPTWSPTSPEAYSPTSPYQRSPGAQQSPTSPSYSPTS 1725
Query: 347 PGYSPTSPAYSPTSPSYSPTSP 412
P +SP +P + YSP SP
Sbjct: 1726 PAFSPRTPGPGSSGNQYSPNSP 1747
Score = 95.5 bits (236), Expect = 2e-18
Identities = 54/109 (49%), Positives = 64/109 (58%), Gaps = 16/109 (14%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPT---- 301
SP + SP+ G +SPTS YSP+SP G TSP +SP+SP +SPT
Sbjct: 1558 SPFTTSPTSPFGPGGGYSPTSPNAYSPTSPLVDGGMGGRYATSPSFSPSSPSFSPTSPMV 1617
Query: 302 ------SPGYSPTSPTYSPSSPG----YSPTSPAY--SPTSPSYSPTSP 412
SP YSP+SP YSP+SP YSPTSPA SPTSP+YSP SP
Sbjct: 1618 RPTSPASPNYSPSSPNYSPASPSSPRHYSPTSPAQFNSPTSPNYSPASP 1666
Score = 90.1 bits (222), Expect = 7e-17
Identities = 51/118 (43%), Positives = 63/118 (53%), Gaps = 2/118 (1%)
Frame = +2
Query: 47 TPGRSPIS-GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+P SP S +P H SP+ SP +SP + T+SP YSP+SP
Sbjct: 1631 SPNYSPASPSSPRHYSPTSPAQFNSPTSPNYSPASPNYSPASPNLHAGGTTSPSYSPASP 1690
Query: 224 GYSPSSP-GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
+SP+SP YSPTSP SPTSP YSPTSP +SP +PG + YSP SPS
Sbjct: 1691 TWSPTSPEAYSPTSPYQRSPGAQQSPTSPSYSPTSPAFSPRTPGPGSSGNQYSPNSPS 1748
Score = 82.0 bits (201), Expect = 2e-14
Identities = 47/91 (51%), Positives = 57/91 (62%), Gaps = 6/91 (6%)
Frame = +2
Query: 158 SPYVGGMAFSPTSSPGYSPSSPG--YSPSSPG-YSPTSPGYSPTSPGYSPTSPGYSPTSP 328
SPY SP ++ SP PG YSP+SP YSPTSP G TSP +SP+SP
Sbjct: 1549 SPYAMRGGTSPFTTSPTSPFGPGGGYSPTSPNAYSPTSPLVDGGMGGRYATSPSFSPSSP 1608
Query: 329 TYSPSSPGYSPTSPA---YSPTSPSYSPTSP 412
++SP+SP PTSPA YSP+SP+YSP SP
Sbjct: 1609 SFSPTSPMVRPTSPASPNYSPSSPNYSPASP 1639
[197][TOP]
>UniRef100_Q54LJ4 Type A von Willebrand factor domain-containing protein n=1
Tax=Dictyostelium discoideum RepID=Q54LJ4_DICDI
Length = 2563
Score = 104 bits (259), Expect = 3e-21
Identities = 61/136 (44%), Positives = 73/136 (53%), Gaps = 15/136 (11%)
Frame = +2
Query: 50 PGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYV--GGMAFSPTSSPGYSPSSP 223
P P T G PS + SPT SP+ ++SPTS P YSP+SP
Sbjct: 1819 PQPPPPPSTSLGRGAPPPSLFFQASQPYSPT-----SPFYIPTSPSYSPTS-PSYSPTSP 1872
Query: 224 GYSPSSPGYSPTSPGYS-------------PTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
YSP+SP YSPTSP YS P SP Y+PTS Y+PT P+YSP SP Y+PT
Sbjct: 1873 SYSPTSPSYSPTSPSYSTSPLYASTSQSYSPVSPSYTPTSLLYAPTIPSYSPVSPSYAPT 1932
Query: 365 SPAYSPTSPSYSPTSP 412
P+ P SYSP+SP
Sbjct: 1933 KPSKLPVLTSYSPSSP 1948
Score = 90.9 bits (224), Expect = 4e-17
Identities = 50/87 (57%), Positives = 56/87 (64%), Gaps = 7/87 (8%)
Frame = +2
Query: 173 GMAFSPTSSPGYSPSSP-------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT 331
G AF + P P P G P S + + P YSPTSP Y PTSP YSPTSP+
Sbjct: 1808 GTAFGRGAPPPPQPPPPPSTSLGRGAPPPSLFFQASQP-YSPTSPFYIPTSPSYSPTSPS 1866
Query: 332 YSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSPTSP+YSPTSPSYS TSP
Sbjct: 1867 YSPTSPSYSPTSPSYSPTSPSYS-TSP 1892
Score = 74.3 bits (181), Expect = 4e-12
Identities = 43/91 (47%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Frame = +2
Query: 98 SPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP---TSSPGYSPSSPGYSPSSPGYSPTSP 265
SPSY SP+ SPT+ + +SP + SP ++S YSP SP Y+P+S Y+PT P
Sbjct: 1864 SPSYSPTSPSY--SPTSPS-YSPTSPSYSTSPLYASTSQSYSPVSPSYTPTSLLYAPTIP 1920
Query: 266 GYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 358
YSP SP Y+PT P P +YSPSSP +S
Sbjct: 1921 SYSPVSPSYAPTKPSKLPVLTSYSPSSPSFS 1951
Score = 65.9 bits (159), Expect = 1e-09
Identities = 43/121 (35%), Positives = 57/121 (47%), Gaps = 18/121 (14%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SPSY SP L + +SP SP Y+P+S Y+P+ P YSP SP Y+P
Sbjct: 1885 SPSYSTSP---LYASTSQSYSPV----------SPSYTPTSLLYAPTIPSYSPVSPSYAP 1931
Query: 278 TSPGYSPTSPGYSPTSPTYS---------------PSSP---GYSPTSPAYSPTSPSYSP 403
T P P YSP+SP++S PS P GYS S ++P+ +P
Sbjct: 1932 TKPSKLPVLTSYSPSSPSFSKSKAKEESTLSEINLPSKPMVAGYSRMSTVSFSSTPTPTP 1991
Query: 404 T 406
T
Sbjct: 1992 T 1992
[198][TOP]
>UniRef100_A8N128 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130
RepID=A8N128_COPC7
Length = 1642
Score = 102 bits (255), Expect = 1e-20
Identities = 67/139 (48%), Positives = 79/139 (56%), Gaps = 4/139 (2%)
Frame = +2
Query: 8 QLPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFS 187
Q P G+ G PG SP S Y SP+ SP + A SP+ A S
Sbjct: 1484 QSPHGAGGMSPG--PGYSPSSPNAY-----SPT---SPGMVPRSPYGAPTSPFSNQYATS 1533
Query: 188 PTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSP-GYSPTSPTY-SPSSPGYSP 361
P +SP YSP+SP TSP YSPTSPG+SPTSP GYSP SP + SP+SP YSP
Sbjct: 1534 PFYDSRRQATSPTYSPTSPIAGLTSPAYSPTSPGFSPTSPNGYSPQSPNFGSPASPNYSP 1593
Query: 362 TSPAYS--PTSPSYSPTSP 412
SP+YS P SP+YSP+SP
Sbjct: 1594 ASPSYSPAPASPNYSPSSP 1612
Score = 102 bits (255), Expect = 1e-20
Identities = 67/139 (48%), Positives = 83/139 (59%), Gaps = 15/139 (10%)
Frame = +2
Query: 41 GMTPG-----RSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGG--MAFSPTSS 199
GM+PG SP + +P GM+ S +P S N SP+ A SPT S
Sbjct: 1491 GMSPGPGYSPSSPNAYSPTSPGMVPRSPYGAPTSPFS--NQYATSPFYDSRRQATSPTYS 1548
Query: 200 PGYSP----SSPGYSPSSPGYSPTSP-GYSPTSPGY-SPTSPGYSPTSPTYSPS--SPGY 355
P SP +SP YSP+SPG+SPTSP GYSP SP + SP SP YSP SP+YSP+ SP Y
Sbjct: 1549 PT-SPIAGLTSPAYSPTSPGFSPTSPNGYSPQSPNFGSPASPNYSPASPSYSPAPASPNY 1607
Query: 356 SPTSPAYSPTSPSYSPTSP 412
SP+SP +SPTSP++ P
Sbjct: 1608 SPSSPTWSPTSPAHDQNGP 1626
Score = 71.6 bits (174), Expect = 3e-11
Identities = 45/113 (39%), Positives = 62/113 (54%), Gaps = 13/113 (11%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMM---SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP- 214
+P + + +P+++ SP+Y SP ++ +SP G FSPTS GYSP
Sbjct: 1524 SPFSNQYATSPFYDSRRQATSPTY--SPTSPIAGLTSPAYSPTSPG--FSPTSPNGYSPQ 1579
Query: 215 -------SSPGYSPSSPGYSPT--SPGYSPTSPGYSPTSPGYSPTSPTYSPSS 346
+SP YSP+SP YSP SP YSP+SP +SPTSP + PT + SS
Sbjct: 1580 SPNFGSPASPNYSPASPSYSPAPASPNYSPSSPTWSPTSPAHDQNGPTNNRSS 1632
Score = 69.7 bits (169), Expect = 1e-10
Identities = 59/162 (36%), Positives = 69/162 (42%), Gaps = 35/162 (21%)
Frame = +2
Query: 32 LDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYS 211
+D MTPG+ I TPY SP ++ D F G AFSP +S G
Sbjct: 1427 IDGAMTPGQVAI--TPYATN--SPDWI----------QDEFFKGDSGPSAFSPLASNGAE 1472
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPG-YSPTS--------------------- 325
++ S P SP G PGYSP+SP YSPTS
Sbjct: 1473 DTANFQYMSFP-QSPHGAGGMSPGPGYSPSSPNAYSPTSPGMVPRSPYGAPTSPFSNQYA 1531
Query: 326 -------------PTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
PTYSP+SP TSPAYSPTSP +SPTSP
Sbjct: 1532 TSPFYDSRRQATSPTYSPTSPIAGLTSPAYSPTSPGFSPTSP 1573
[199][TOP]
>UniRef100_A7TTU2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Vanderwaltozyma
polyspora DSM 70294 RepID=A7TTU2_VANPO
Length = 1311
Score = 102 bits (255), Expect = 1e-20
Identities = 63/136 (46%), Positives = 78/136 (57%), Gaps = 11/136 (8%)
Frame = +2
Query: 26 DGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQ--------FSPYVG--- 172
DG + G+TP + G+++ L L SP D+ F+ Y G
Sbjct: 1146 DGQEGGLTPYSN-------ESGLVNADIDLKDELMFSPLVDSGSTDAMAGGFTAYGGADY 1198
Query: 173 GMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG 352
G A SP ++ G SPSSPG+ S SPG+SPTSP YSPTSP YSPTSP+YSP+S
Sbjct: 1199 GGATSPFTAYGESPSSPGFGGVS------SPGFSPTSPAYSPTSPSYSPTSPSYSPTSTS 1252
Query: 353 YSPTSPAYSPTSPSYS 400
YS TS +YSPTSPSYS
Sbjct: 1253 YSQTSSSYSPTSPSYS 1268
[200][TOP]
>UniRef100_Q6ZJR1 DNA-directed RNA polymerase largest chain-like protein n=1
Tax=Oryza sativa Japonica Group RepID=Q6ZJR1_ORYSJ
Length = 138
Score = 100 bits (248), Expect = 7e-20
Identities = 53/85 (62%), Positives = 59/85 (69%), Gaps = 12/85 (14%)
Frame = +2
Query: 194 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSP---TSPGYSPTSPTYSPSSPGYSPT 364
+SP YSP+SP Y+PSS YSP S YSP+SP SP TSP YSPTSPTYSP+SP YS
Sbjct: 18 TSPNYSPTSPSYNPSSAKYSP-SHAYSPSSPRLSPYSQTSPNYSPTSPTYSPTSPSYSQP 76
Query: 365 SPAYSPT---------SPSYSPTSP 412
SP+YSPT SP YSPTSP
Sbjct: 77 SPSYSPTSPYTTSGGPSPDYSPTSP 101
Score = 98.6 bits (244), Expect = 2e-19
Identities = 58/107 (54%), Positives = 70/107 (65%), Gaps = 3/107 (2%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SP+Y SP + A++SP SP SP YS +SP YSP+SP YSPTSP YS
Sbjct: 19 SPNY--SPTSPSYNPSSAKYSPSHAYSPSSPRLSP-YSQTSPNYSPTSPTYSPTSPSYSQ 75
Query: 278 TSPGYSPTSPGYSPT---SPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
SP YSPTSP Y+ + SP YSP+SP YSP S +YSPT+P YSP+S
Sbjct: 76 PSPSYSPTSP-YTTSGGPSPDYSPTSPNYSP-SGSYSPTAPGYSPSS 120
Score = 95.1 bits (235), Expect = 2e-18
Identities = 47/70 (67%), Positives = 54/70 (77%), Gaps = 3/70 (4%)
Frame = +2
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSP---GYSPTSPTYSPSSPGYSPTSPAYSP 382
P+SP YSP+SP Y+P+S YSP S YSP+SP YS TSP YSP+SP YSPTSP+YS
Sbjct: 17 PTSPNYSPTSPSYNPSSAKYSP-SHAYSPSSPRLSPYSQTSPNYSPTSPTYSPTSPSYSQ 75
Query: 383 TSPSYSPTSP 412
SPSYSPTSP
Sbjct: 76 PSPSYSPTSP 85
Score = 80.5 bits (197), Expect = 5e-14
Identities = 55/100 (55%), Positives = 62/100 (62%), Gaps = 12/100 (12%)
Frame = +2
Query: 98 SPSYMLSPNL-RLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSP--- 265
SPS+ SP+ RLSP + Q SP +SPTS P YSP+SP YS SP YSPTSP
Sbjct: 37 SPSHAYSPSSPRLSPYS--QTSPN-----YSPTS-PTYSPTSPSYSQPSPSYSPTSPYTT 88
Query: 266 ------GYSPTSPGYSPTSPGYSPTSPTYSPSSPG--YSP 361
YSPTSP YSP S YSPT+P YSPSS G +SP
Sbjct: 89 SGGPSPDYSPTSPNYSP-SGSYSPTAPGYSPSSTGQQFSP 127
Score = 58.2 bits (139), Expect = 3e-07
Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 10/94 (10%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS--------SP 202
+P SP S T + SP+Y SPT+ + P ++SPTS SP
Sbjct: 46 SPRLSPYSQTSPNYSPTSPTY--------SPTSPSYSQP---SPSYSPTSPYTTSGGPSP 94
Query: 203 GYSPSSPGYSPSSPGYSPTSPGYSPTSPG--YSP 298
YSP+SP YSPS YSPT+PGYSP+S G +SP
Sbjct: 95 DYSPTSPNYSPSG-SYSPTAPGYSPSSTGQQFSP 127
[201][TOP]
>UniRef100_Q4N0F9 DNA-directed RNA polymerase n=1 Tax=Theileria parva
RepID=Q4N0F9_THEPA
Length = 1681
Score = 98.6 bits (244), Expect = 2e-19
Identities = 68/131 (51%), Positives = 77/131 (58%), Gaps = 26/131 (19%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP--------GYSPSS---- 241
SP+ +SP +SPT+ SP A SP SP YSP+SP SP+S
Sbjct: 1544 SPTSPMSPTSPMSPTSP--MSPMSPTSAMSPVYSPAYSPTSPMSPTSPANALSPTSPVYS 1601
Query: 242 PGYSPTSP--GYSPT----SPGYSPTSP--GYSPTSPTYSPS-SP-----GYSPTSPAYS 379
P YSPTSP SPT SP YSPTSP GY+PTSP YSP+ SP GYSPTSP S
Sbjct: 1602 PAYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPTSPVYSPAYSPTSPNYGYSPTSP-LS 1660
Query: 380 PTSPSYSPTSP 412
PTSP+YSPT P
Sbjct: 1661 PTSPAYSPTDP 1671
Score = 82.8 bits (203), Expect = 1e-14
Identities = 77/178 (43%), Positives = 90/178 (50%), Gaps = 55/178 (30%)
Frame = +2
Query: 44 MTPGRSPIS-GTPYHEGMMSP--------SYMLSP--NLRLSP-TNDAQFSPYVGGMAFS 187
++P SP+S TP + MSP S M+SP + + P T Y G +FS
Sbjct: 1482 VSPDSSPLSPSTPATKQTMSPMAFSPTYTSLMMSPVGGIGMGPSTPGLMVDTYALGGSFS 1541
Query: 188 PTSSPG-YSPSSPGYSPSSP--GYSPTS-------PGYSPTSP--------GYSPT---- 301
PTS SP+SP SP+SP SPTS P YSPTSP SPT
Sbjct: 1542 PTSPTSPMSPTSP-MSPTSPMSPMSPTSAMSPVYSPAYSPTSPMSPTSPANALSPTSPVY 1600
Query: 302 SPGYSPTSPT-------------YSPSSP--GYSPT----SPAYSPTSPS--YSPTSP 412
SP YSPTSPT YSP+SP GY+PT SPAYSPTSP+ YSPTSP
Sbjct: 1601 SPAYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPTSPVYSPAYSPTSPNYGYSPTSP 1658
[202][TOP]
>UniRef100_UPI00016E658E UPI00016E658E related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016E658E
Length = 1628
Score = 98.2 bits (243), Expect = 3e-19
Identities = 70/138 (50%), Positives = 81/138 (58%), Gaps = 14/138 (10%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG-----TPYHEGMMSPSYMLSPNLRLSPTNDAQ-FSPYVGGMA--F 184
G+ FG P SP+SG TP++ G SP++ T A FSP A F
Sbjct: 1498 GMFFGSAP--SPMSGMSPAMTPWNTGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGF 1555
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPT-----SPGYSPTSPGYSPTSPT-YSPSS 346
SP SP +SP+ PG SP SPG P SP Y P+ SP YSPTSP Y P SP Y+P S
Sbjct: 1556 SPGYSPAWSPT-PG-SPGSPG--PASP-YIPSPGGAMSPNYSPTSPAYEPRSPGGYTPQS 1610
Query: 347 PGYSPTSPAYSPTSPSYS 400
PGYSPTSP+YSPTSPSYS
Sbjct: 1611 PGYSPTSPSYSPTSPSYS 1628
Score = 55.5 bits (132), Expect = 2e-06
Identities = 44/98 (44%), Positives = 56/98 (57%), Gaps = 18/98 (18%)
Frame = +2
Query: 173 GMAFSPTS--SPGYSPSSPGYSPSSPGYSPT-SPGYSPTSPGYSPT--------SPGYSP 319
G A SP S SP +P + G +P+ +SP+ G +P + G+SP+ SPGYSP
Sbjct: 1502 GSAPSPMSGMSPAMTPWNTGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPGYSP 1561
Query: 320 T-SPTY-SPSSPGYSPTSPAYSPT-----SPSYSPTSP 412
SPT SP SPG P SP Y P+ SP+YSPTSP
Sbjct: 1562 AWSPTPGSPGSPG--PASP-YIPSPGGAMSPNYSPTSP 1596
[203][TOP]
>UniRef100_Q4UCP5 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
RepID=Q4UCP5_THEAN
Length = 1678
Score = 98.2 bits (243), Expect = 3e-19
Identities = 74/155 (47%), Positives = 85/155 (54%), Gaps = 37/155 (23%)
Frame = +2
Query: 59 SPISGT---PYHEGMMSPSYML-------SPNLRLSPTND-AQFSPYVGGMAFSPTSSPG 205
SP+ G P G+M +Y L SP +SPT+ + SP A SP SP
Sbjct: 1515 SPVGGIGMGPSTPGLMVDTYALGGSFSPTSPTSPMSPTSPMSPTSPMSPTSAISPVYSPA 1574
Query: 206 YSPSSP--------GYSPSS----PGYSPTSP--GYSPT----SPGYSPTSP--GYSPTS 325
YSP+SP SP+S P YSPTSP SPT SP YSPTSP GY+PTS
Sbjct: 1575 YSPTSPMSPTSPTSALSPTSPVYSPAYSPTSPTSAMSPTSPVYSPAYSPTSPNLGYAPTS 1634
Query: 326 PTYSPS-SP-----GYSPTSPAYSPTSPSYSPTSP 412
P YSP+ SP GYSPTSP SPTSP+YSPT P
Sbjct: 1635 PVYSPAYSPTTPNYGYSPTSP-LSPTSPAYSPTDP 1668
[204][TOP]
>UniRef100_UPI00004C0623 PREDICTED: similar to zinc finger protein 239 (predicted) isoform 1
n=1 Tax=Canis lupus familiaris RepID=UPI00004C0623
Length = 554
Score = 95.5 bits (236), Expect = 2e-18
Identities = 52/133 (39%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Frame = +2
Query: 23 MDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSP----YVGGMAFSP 190
++ + FG+ P +SP P G S S P + F P + S
Sbjct: 51 VEEIPFGLDP-QSP-GFEPQSPGFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPDSD 108
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
+ SP + P SP Y P SPGY P SPGY P SPGY P SPGY P SP Y SPGY P +P
Sbjct: 109 SQSPEFEPQSPRYEPQSPGYEPRSPGYEPKSPGYEPKSPGYEPRSPGYESQSPGYEPQNP 168
Query: 371 AYSPTSPSYSPTS 409
+ SP + S
Sbjct: 169 EFKTQSPEFEAQS 181
Score = 90.9 bits (224), Expect = 4e-17
Identities = 48/103 (46%), Positives = 56/103 (54%)
Frame = +2
Query: 89 GMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPG 268
G + PS +P SP +D+Q SP F P SP Y P SPGY P SPGY P SPG
Sbjct: 92 GFVPPSPEFAPR---SPDSDSQ-SP-----EFEP-QSPRYEPQSPGYEPRSPGYEPKSPG 141
Query: 269 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
Y P SPGY P SPGY SP Y P +P + SP + S +
Sbjct: 142 YEPKSPGYEPRSPGYESQSPGYEPQNPEFKTQSPEFEAQSSKF 184
Score = 90.5 bits (223), Expect = 5e-17
Identities = 39/72 (54%), Positives = 43/72 (59%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPG+ P SP ++P SP SP + P SP Y P SPGY P SP Y P SPGY P SP Y
Sbjct: 90 SPGFVPPSPEFAPRSPDSDSQSPEFEPQSPRYEPQSPGYEPRSPGYEPKSPGYEPKSPGY 149
Query: 377 SPTSPSYSPTSP 412
P SP Y SP
Sbjct: 150 EPRSPGYESQSP 161
Score = 89.0 bits (219), Expect = 2e-16
Identities = 40/77 (51%), Positives = 45/77 (58%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
F P SPG+ SPG+ P SP ++P SP SP + P SP Y P SP Y P SPGY P
Sbjct: 79 FEP-ESPGFESRSPGFVPPSPEFAPRSPDSDSQSPEFEPQSPRYEPQSPGYEPRSPGYEP 137
Query: 362 TSPAYSPTSPSYSPTSP 412
SP Y P SP Y P SP
Sbjct: 138 KSPGYEPKSPGYEPRSP 154
Score = 88.6 bits (218), Expect = 2e-16
Identities = 37/74 (50%), Positives = 44/74 (59%)
Frame = +2
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
+ SP + P SPG+ SPG+ P SP ++P SP SP + P SP Y P SPGY P SP
Sbjct: 74 SQSPRFEPESPGFESRSPGFVPPSPEFAPRSPDSDSQSPEFEPQSPRYEPQSPGYEPRSP 133
Query: 371 AYSPTSPSYSPTSP 412
Y P SP Y P SP
Sbjct: 134 GYEPKSPGYEPKSP 147
Score = 60.5 bits (145), Expect = 6e-08
Identities = 25/56 (44%), Positives = 32/56 (57%)
Frame = +2
Query: 245 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
G P SPG+ P SPG+ SP + P SP + SPG+ P SP ++P SP SP
Sbjct: 57 GLDPQSPGFEPQSPGFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPDSDSQSP 112
[205][TOP]
>UniRef100_Q56Z04 DNA-directed RNA polymerase II largest chain (Fragment) n=1
Tax=Arabidopsis thaliana RepID=Q56Z04_ARATH
Length = 99
Score = 95.5 bits (236), Expect = 2e-18
Identities = 47/67 (70%), Positives = 53/67 (79%)
Frame = +2
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
SP+SP YSP+SP YSPTSP YSPTSP YSP+SP YSP+SP S +SP YSP S YSPT
Sbjct: 7 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 64
Query: 389 PSYSPTS 409
P YSP+S
Sbjct: 65 PGYSPSS 71
Score = 93.2 bits (230), Expect = 8e-18
Identities = 48/74 (64%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Frame = +2
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
SP S YSP+SP YSP+SP YSPTSP YSP+SP YSP+SP S SP YSPS+ GYSPT
Sbjct: 7 SPASP--YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSPSA-GYSPT 63
Query: 365 SPAYSPTSP-SYSP 403
P YSP+S Y+P
Sbjct: 64 LPGYSPSSTGQYTP 77
Score = 90.9 bits (224), Expect = 4e-17
Identities = 46/61 (75%), Positives = 48/61 (78%)
Frame = +2
Query: 230 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
SP+SP YSPTSP YSPTSP YSPTSP YSP+SPTYSPSSP S SP YSP S YSPT
Sbjct: 7 SPASP-YSPTSPNYSPTSPSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP-SAGYSPTL 64
Query: 410 P 412
P
Sbjct: 65 P 65
Score = 80.9 bits (198), Expect = 4e-14
Identities = 49/81 (60%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Frame = +2
Query: 122 NLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPT 301
N RLSP + +SP +SPTS P YSP+SP YSPSSP YSP+SP S SP YSP
Sbjct: 3 NARLSPASP--YSPTSPN--YSPTS-PSYSPTSPSYSPSSPTYSPSSPYSSGASPDYSP- 56
Query: 302 SPGYSPTSPTYSPSSPG-YSP 361
S GYSPT P YSPSS G Y+P
Sbjct: 57 SAGYSPTLPGYSPSSTGQYTP 77
Score = 58.2 bits (139), Expect = 3e-07
Identities = 39/76 (51%), Positives = 45/76 (59%), Gaps = 14/76 (18%)
Frame = +2
Query: 113 LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSP-------------GYS 253
LSP SPT+ +SP ++SPTS P YSPSSP YSPSSP GYS
Sbjct: 6 LSPASPYSPTSP-NYSPT--SPSYSPTS-PSYSPSSPTYSPSSPYSSGASPDYSPSAGYS 61
Query: 254 PTSPGYSPTSPG-YSP 298
PT PGYSP+S G Y+P
Sbjct: 62 PTLPGYSPSSTGQYTP 77
[206][TOP]
>UniRef100_A0E2M3 Chromosome undetermined scaffold_75, whole genome shotgun sequence
n=1 Tax=Paramecium tetraurelia RepID=A0E2M3_PARTE
Length = 288
Score = 95.5 bits (236), Expect = 2e-18
Identities = 50/128 (39%), Positives = 54/128 (42%), Gaps = 7/128 (5%)
Frame = +2
Query: 50 PGRSP-ISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFS------PYVGGMAFSPTSSPGY 208
PG+ P PY + M P P + P + P G A PGY
Sbjct: 131 PGQQPYFPNQPYQQQPMYPPQPGYPPQQPYPPQQPGYPTQPGYPPQPGYPAQPYPQQPGY 190
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
P PGY P PGY P PGY P PGY P PGY P P Y P PGY P P Y P
Sbjct: 191 PPQQPGYPPQQPGYPPQQPGYPPQQPGYPP-QPGYPPQQPGYPPQQPGYPPQQPGYPPQQ 249
Query: 389 PSYSPTSP 412
P Y P P
Sbjct: 250 PGYPPQQP 257
Score = 85.9 bits (211), Expect = 1e-15
Identities = 49/126 (38%), Positives = 50/126 (39%), Gaps = 8/126 (6%)
Frame = +2
Query: 50 PGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFS----PTSSPGYSPS 217
PG P P + P Y P P AQ P G P PGY P
Sbjct: 152 PGYPPQQPYPPQQ----PGYPTQPGYPPQPGYPAQPYPQQPGYPPQQPGYPPQQPGYPPQ 207
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS----PT 385
PGY P PGY P PGY P PGY P PGY P P Y P PGY P P Y P
Sbjct: 208 QPGYPPQQPGYPP-QPGYPPQQPGYPPQQPGYPPQQPGYPPQQPGYPPQQPGYPAQQYPP 266
Query: 386 SPSYSP 403
Y P
Sbjct: 267 QQGYPP 272
Score = 66.2 bits (160), Expect = 1e-09
Identities = 41/111 (36%), Positives = 43/111 (38%), Gaps = 9/111 (8%)
Frame = +2
Query: 50 PGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGM-----AFSPTSSPGYSP 214
PG P G P P Y P P + P G + P PGY P
Sbjct: 171 PGYPPQPGYPAQPYPQQPGY--PPQQPGYPPQQPGYPPQQPGYPPQQPGYPP--QPGYPP 226
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYS----PTSPTYSPSSPGY 355
PGY P PGY P PGY P PGY P PGY P Y P PGY
Sbjct: 227 QQPGYPPQQPGYPPQQPGYPPQQPGYPPQQPGYPAQQYPPQQGY-PPQPGY 276
[207][TOP]
>UniRef100_A5DCV1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DCV1_PICGU
Length = 224
Score = 95.1 bits (235), Expect = 2e-18
Identities = 41/48 (85%), Positives = 44/48 (91%)
Frame = +2
Query: 260 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
SP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 132 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 179
Score = 93.6 bits (231), Expect = 6e-18
Identities = 40/48 (83%), Positives = 43/48 (89%)
Frame = +2
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 382
SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSP
Sbjct: 132 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 179
Score = 92.0 bits (227), Expect = 2e-17
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPS 343
SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+
Sbjct: 132 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPN 180
Score = 91.7 bits (226), Expect = 2e-17
Identities = 39/48 (81%), Positives = 42/48 (87%)
Frame = +2
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSP
Sbjct: 132 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 179
Score = 88.2 bits (217), Expect = 3e-16
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = +2
Query: 281 SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 132 SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSP 175
Score = 81.3 bits (199), Expect = 3e-14
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +2
Query: 179 AFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSP 319
++SPTS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 134 SYSPTS-PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP 179
Score = 74.7 bits (182), Expect = 3e-12
Identities = 45/96 (46%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Frame = +2
Query: 65 ISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSP 244
++ P+H P+++LSP+ SPT+ + +SPTS P YSP+SP YSP+SP
Sbjct: 120 VTHQPHH-----PTHLLSPSY--SPTSPS----------YSPTS-PSYSPTSPSYSPTSP 161
Query: 245 GYSPTSPGYSPTSPGYSPTSPGY---SPTSPTYSPS 343
YSPTSP YSPTSP YSP PT TY PS
Sbjct: 162 SYSPTSPSYSPTSPSYSPNVAQLLTNFPTVLTYFPS 197
[208][TOP]
>UniRef100_UPI000151A8B4 hypothetical protein PGUG_01106 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151A8B4
Length = 224
Score = 94.4 bits (233), Expect = 4e-18
Identities = 41/48 (85%), Positives = 43/48 (89%)
Frame = +2
Query: 260 SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
SP YSPTSP YSPTSP YSPTSP YSP+SP YSPTSP+YSPTSPSYSP
Sbjct: 132 SPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSP 179
Score = 92.0 bits (227), Expect = 2e-17
Identities = 40/48 (83%), Positives = 43/48 (89%)
Frame = +2
Query: 239 SPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 382
SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSPTSP+YSP
Sbjct: 132 SPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSP 179
Score = 90.5 bits (223), Expect = 5e-17
Identities = 39/49 (79%), Positives = 43/49 (87%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPS 343
SP YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+
Sbjct: 132 SPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSPN 180
Score = 90.1 bits (222), Expect = 7e-17
Identities = 39/48 (81%), Positives = 42/48 (87%)
Frame = +2
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
SP YSP+SP YSPTSP YSPTSP YSPTSP YSPTSP+YSP+SP YSP
Sbjct: 132 SPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSP 179
Score = 86.7 bits (213), Expect = 8e-16
Identities = 38/44 (86%), Positives = 41/44 (93%)
Frame = +2
Query: 281 SPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPTSP YSPTSP+YSP+SP YSPTSP+YSPTSPSYSPTSP
Sbjct: 132 SPSYSPTSPSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSP 175
Score = 79.7 bits (195), Expect = 9e-14
Identities = 36/47 (76%), Positives = 40/47 (85%)
Frame = +2
Query: 179 AFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSP 319
++SPTS P YSP+SP YSP+SP YSPTSP YSPTSP YSPTSP YSP
Sbjct: 134 SYSPTS-PSYSPTSPSYSPTSPLYSPTSPSYSPTSPSYSPTSPSYSP 179
Score = 73.2 bits (178), Expect = 9e-12
Identities = 45/96 (46%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Frame = +2
Query: 65 ISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSP 244
++ P+H P+++LSP+ SPT+ + +SPTS P YSP+SP YSP+SP
Sbjct: 120 VTHQPHH-----PTHLLSPSY--SPTSPS----------YSPTS-PSYSPTSPLYSPTSP 161
Query: 245 GYSPTSPGYSPTSPGYSPTSPGY---SPTSPTYSPS 343
YSPTSP YSPTSP YSP PT TY PS
Sbjct: 162 SYSPTSPSYSPTSPSYSPNVAQLLTNFPTVLTYFPS 197
[209][TOP]
>UniRef100_A7NVN8 Chromosome chr18 scaffold_1, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7NVN8_VITVI
Length = 89
Score = 94.4 bits (233), Expect = 4e-18
Identities = 48/78 (61%), Positives = 57/78 (73%), Gaps = 1/78 (1%)
Frame = +2
Query: 173 GMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG 352
G A+ SS SP+SP YSP+SP YSP SP YSPTSP S SP YSP+SP YSPS+ G
Sbjct: 2 GFAYLIISSYSCSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSPSA-G 60
Query: 353 YSPTSPAYSPTSPS-YSP 403
YSP++P YSP+S S Y+P
Sbjct: 61 YSPSAPGYSPSSTSQYTP 78
Score = 88.6 bits (218), Expect = 2e-16
Identities = 44/65 (67%), Positives = 48/65 (73%)
Frame = +2
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
SS SP+SP YSPTSP YSP SP YSPTSP S SP YSPSSP YSP S YSP++P
Sbjct: 9 SSYSCSPTSPSYSPTSPSYSPASPTYSPTSPYNSGVSPDYSPSSPQYSP-SAGYSPSAPG 67
Query: 395 YSPTS 409
YSP+S
Sbjct: 68 YSPSS 72
Score = 68.2 bits (165), Expect = 3e-10
Identities = 38/63 (60%), Positives = 42/63 (66%), Gaps = 4/63 (6%)
Frame = +2
Query: 236 SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSS----PGYSPTSPAYSPTSPSYSP 403
SS SPTSP YSPTSP YSP SP YSPTSP + P YSP+SP YSP S YSP
Sbjct: 9 SSYSCSPTSPSYSPTSPSYSPASPTYSPTSPY----NSGVSPDYSPSSPQYSP-SAGYSP 63
Query: 404 TSP 412
++P
Sbjct: 64 SAP 66
[210][TOP]
>UniRef100_Q1WKU0 Putative RNA polymerase II 215 kD subunit (Fragment) n=2
Tax=melanogaster subgroup RepID=Q1WKU0_DROYA
Length = 766
Score = 94.0 bits (232), Expect = 5e-18
Identities = 64/152 (42%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQ-FSP-------YVGGMAF 184
G++ T G S + G G S M P N + FSP GG +F
Sbjct: 617 GIEIPNTLGSSMLGGAAMFIGGGSTPSMTPPMTPWVNCNTPRYFSPPGHVSAMTPGGPSF 676
Query: 185 SPTS-------SPGYSPSSPGYSPSSPG-----YSPTSPG----YSPTSPGYSPTSPGYS 316
SP++ SP +SP+ PG SPSSPG Y P SP YSPTSP Y+ +SPG +
Sbjct: 677 SPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGA 736
Query: 317 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP YSPSSP YSPTSP Y+ SP Y+ T+P
Sbjct: 737 --SPNYSPSSPNYSPTSPLYASASPRYASTTP 766
[211][TOP]
>UniRef100_B9PMD7 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii
RepID=B9PMD7_TOXGO
Length = 1892
Score = 94.0 bits (232), Expect = 5e-18
Identities = 64/144 (44%), Positives = 76/144 (52%), Gaps = 24/144 (16%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYS 232
GR+P+S MSP + S + SPT+ Q S +PTS SP SP YS
Sbjct: 1716 GRTPLSPFSPSNNPMSPHFSASTSY--SPTSPVQQS--------NPTSPT--SPYSPAYS 1763
Query: 233 PSSPGYSPTSPGYSPTSPGYSPTSPGY----SPTSPTYSPSSPGYSPTSP-AYSPTSP-- 391
P+SP YSPTSP YSPT YSP SP Y P SP+++ SP YSP+SP AYSPTSP
Sbjct: 1764 PTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYSPSSPAAYSPTSPMP 1823
Query: 392 -----------------SYSPTSP 412
+YSPTSP
Sbjct: 1824 NVAGSPSYEDSHAPGGDTYSPTSP 1847
Score = 71.2 bits (173), Expect = 3e-11
Identities = 63/145 (43%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Frame = +2
Query: 29 GLDFGMTPGR-SPISGTPYHEGMMSPSYMLSPNLRLSPTND-AQFSPY-VGGMAFSPTS- 196
G+D G+ SP TP SP+ LSP SP N + SP G FSPTS
Sbjct: 1565 GVDTQQLGGKFSPTQQTP-----RSPTSPLSPLSCFSPRNPLSPLSPSGPPGGVFSPTSP 1619
Query: 197 --SPGYSPSSPGYSPSSP--GYSPTSPGYSPTSPGYSPTSPG---------YSPTSPTYS 337
SSP YSPSSP Y S SP G YSPTSPT S
Sbjct: 1620 ILGSALETSSPSYSPSSPQSAYFQNDGSSSAVDMVISPGGVGSDGRGRGGSYSPTSPTLS 1679
Query: 338 PSSPGYSPTSP-AYSPTSPSYSPTS 409
PS YSP+SP +YSPTSP+YSPTS
Sbjct: 1680 PS---YSPSSPPSYSPTSPAYSPTS 1701
Score = 55.5 bits (132), Expect = 2e-06
Identities = 59/176 (33%), Positives = 74/176 (42%), Gaps = 53/176 (30%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSP--------SYMLSPNLRLSPT----NDAQFSPYVGGMAFS 187
+TP S + +P+ + SP S+ SP LSPT N + +GG FS
Sbjct: 1519 ITPDGS-FTPSPHLNSVFSPMPFSTVYSSFAASPANPLSPTTLGTNAGVDTQQLGGK-FS 1576
Query: 188 PTSSPGYSPSSP-----GYSPSSPGYSPTSPGYSPTSPGYSPTSP----GYSPTSPTYSP 340
PT SP+SP +SP +P SP SP P +SPTSP +SP+YSP
Sbjct: 1577 PTQQTPRSPTSPLSPLSCFSPRNP-LSPLSPS-GPPGGVFSPTSPILGSALETSSPSYSP 1634
Query: 341 SSP--------------------------------GYSPTSPAYSPTSPSYSPTSP 412
SSP YSPTSP SP SYSP+SP
Sbjct: 1635 SSPQSAYFQNDGSSSAVDMVISPGGVGSDGRGRGGSYSPTSPTLSP---SYSPSSP 1687
[212][TOP]
>UniRef100_B6KEC6 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
RepID=B6KEC6_TOXGO
Length = 1892
Score = 94.0 bits (232), Expect = 5e-18
Identities = 64/144 (44%), Positives = 76/144 (52%), Gaps = 24/144 (16%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYS 232
GR+P+S MSP + S + SPT+ Q S +PTS SP SP YS
Sbjct: 1716 GRTPLSPFSPSNNPMSPHFSASTSY--SPTSPVQQS--------NPTSPT--SPYSPAYS 1763
Query: 233 PSSPGYSPTSPGYSPTSPGYSPTSPGY----SPTSPTYSPSSPGYSPTSP-AYSPTSP-- 391
P+SP YSPTSP YSPT YSP SP Y P SP+++ SP YSP+SP AYSPTSP
Sbjct: 1764 PTSPRYSPTSPMYSPTFAPYSPQSPSYGAGQGPLSPSFTVQSPRYSPSSPAAYSPTSPMP 1823
Query: 392 -----------------SYSPTSP 412
+YSPTSP
Sbjct: 1824 NVAGSPSYEDSHAPGGDTYSPTSP 1847
Score = 70.1 bits (170), Expect = 7e-11
Identities = 62/145 (42%), Positives = 70/145 (48%), Gaps = 18/145 (12%)
Frame = +2
Query: 29 GLDFGMTPGR-SPISGTPYHEGMMSPSYMLSPNLRLSPTND-AQFSPY-VGGMAFSPTS- 196
G+D G+ SP TP SP+ LSP SP N + SP G FSPTS
Sbjct: 1565 GVDTQQLGGKFSPTQQTP-----RSPTSPLSPLSCFSPRNPLSPLSPSGPPGGVFSPTSP 1619
Query: 197 --SPGYSPSSPGYSPSSP--GYSPTSPGYSPTSPGYSPTSPG---------YSPTSPTYS 337
SSP YSPSSP Y S SP G YSPTSPT S
Sbjct: 1620 ILGSALETSSPSYSPSSPQSAYFQNDGSSSAVDMVISPGGVGSDGRGRGGSYSPTSPTLS 1679
Query: 338 PSSPGYSPTSP-AYSPTSPSYSPTS 409
PS YSP++P +YSPTSP+YSPTS
Sbjct: 1680 PS---YSPSAPPSYSPTSPAYSPTS 1701
Score = 54.3 bits (129), Expect = 4e-06
Identities = 58/176 (32%), Positives = 74/176 (42%), Gaps = 53/176 (30%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSP--------SYMLSPNLRLSPT----NDAQFSPYVGGMAFS 187
+TP S + +P+ + SP S+ SP LSPT N + +GG FS
Sbjct: 1519 ITPDGS-FTPSPHLNSVFSPMPFSTVYSSFAASPANPLSPTTLGTNAGVDTQQLGGK-FS 1576
Query: 188 PTSSPGYSPSSP-----GYSPSSPGYSPTSPGYSPTSPGYSPTSP----GYSPTSPTYSP 340
PT SP+SP +SP +P SP SP P +SPTSP +SP+YSP
Sbjct: 1577 PTQQTPRSPTSPLSPLSCFSPRNP-LSPLSPS-GPPGGVFSPTSPILGSALETSSPSYSP 1634
Query: 341 SSP--------------------------------GYSPTSPAYSPTSPSYSPTSP 412
SSP YSPTSP SP SYSP++P
Sbjct: 1635 SSPQSAYFQNDGSSSAVDMVISPGGVGSDGRGRGGSYSPTSPTLSP---SYSPSAP 1687
[213][TOP]
>UniRef100_O04142 DNA-directed RNA polymerase (Fragment) n=1 Tax=Porphyra yezoensis
RepID=O04142_PORYE
Length = 1685
Score = 93.6 bits (231), Expect = 6e-18
Identities = 63/151 (41%), Positives = 76/151 (50%), Gaps = 28/151 (18%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSP-YVGGMAFSPTSSPG-YSPS 217
MTPGRSP SP Y A SP + GG+ P G Y+P+
Sbjct: 1535 MTPGRSPAGRFTPRMSPASPGY-------------AAMSPRFGGGLCGGPAGGAGAYAPA 1581
Query: 218 SPGYSPSSPG--YSPTSPGYSPTSPGYSPTSPGYSPTSPTY-----------SPSSPGYS 358
SP Y +SPG YSP++P + +SPGYSP GYSPTSP+ SP SPGY
Sbjct: 1582 SPAYMATSPGMGYSPSTPALAVSSPGYSP---GYSPTSPSVGARGGPAAGYASPQSPGYV 1638
Query: 359 PTSPAY-------------SPTSPSYSPTSP 412
PTSPAY SP+SP+YSP+SP
Sbjct: 1639 PTSPAYARPGTVVAAANVYSPSSPAYSPSSP 1669
[214][TOP]
>UniRef100_UPI0000DC19F8 UPI0000DC19F8 related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0000DC19F8
Length = 417
Score = 91.7 bits (226), Expect = 2e-17
Identities = 58/128 (45%), Positives = 71/128 (55%), Gaps = 5/128 (3%)
Frame = +2
Query: 44 MTPGRSPIS-GT-PYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS---SPGY 208
++PGR+P+S GT P G S +P +SP A SP G SP SPG
Sbjct: 71 VSPGRAPVSPGTVPVSPGRAPVSPGRAP---VSPGERAPVSP--GRAPVSPGRAPVSPGR 125
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTS 388
+P SPG +P SPG P SPG +P SPG +P SPG +P SP +P SPG P SP P S
Sbjct: 126 APVSPGRAPVSPGRVPVSPGRAPVSPGRAPVSPGRAPVSPGRAPVSPGTVPVSPGTVPVS 185
Query: 389 PSYSPTSP 412
P +P SP
Sbjct: 186 PGRAPVSP 193
Score = 90.9 bits (224), Expect = 4e-17
Identities = 56/131 (42%), Positives = 73/131 (55%), Gaps = 8/131 (6%)
Frame = +2
Query: 44 MTPGRSPISG--TPYHEGM--MSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS---S 199
++PGR+P+S P G +SP +SP A SP G + SP + S
Sbjct: 128 VSPGRAPVSPGRVPVSPGRAPVSPGRAPVSPGRAPVSPGRAPVSP--GTVPVSPGTVPVS 185
Query: 200 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
PG +P SPG +P SPG +P SPG +P SPG +P SPG P SP +P SPG +P SP +
Sbjct: 186 PGRAPVSPGRAPVSPGRAPVSPGRAPVSPGRAPVSPGTVPVSPGRAPVSPGRAPVSPGRA 245
Query: 380 PTSPSYSPTSP 412
P SP +P SP
Sbjct: 246 PVSPGRAPVSP 256
Score = 89.7 bits (221), Expect = 9e-17
Identities = 52/126 (41%), Positives = 68/126 (53%), Gaps = 3/126 (2%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS---SPGYSP 214
++PGR+P+S P + +SP SP G + SP SPG +P
Sbjct: 142 VSPGRAPVS--PGRAPVSPGRAPVSPGRAPVSPGTVPVSP--GTVPVSPGRAPVSPGRAP 197
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
SPG +P SPG +P SPG +P SPG P SPG +P SP +P SPG +P SP +P SP
Sbjct: 198 VSPGRAPVSPGRAPVSPGRAPVSPGTVPVSPGRAPVSPGRAPVSPGRAPVSPGRAPVSPG 257
Query: 395 YSPTSP 412
+P SP
Sbjct: 258 RAPVSP 263
Score = 89.7 bits (221), Expect = 9e-17
Identities = 53/126 (42%), Positives = 68/126 (53%), Gaps = 3/126 (2%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS---SPGYSP 214
++PGR+P+S P + +SP A SP G + SP SPG +P
Sbjct: 184 VSPGRAPVS--PGRAPVSPGRAPVSPGRAPVSPGRAPVSP--GTVPVSPGRAPVSPGRAP 239
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
SPG +P SPG +P SPG +P SPG P SPG +P SP +P SPG +P SP +P SP
Sbjct: 240 VSPGRAPVSPGRAPVSPGRAPVSPGTVPVSPGRAPVSPGRAPVSPGRAPVSPGRAPVSPG 299
Query: 395 YSPTSP 412
P SP
Sbjct: 300 TVPVSP 305
Score = 88.6 bits (218), Expect = 2e-16
Identities = 53/127 (41%), Positives = 67/127 (52%), Gaps = 4/127 (3%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS----SPGYS 211
++PGR+P+S P + +SP A SP G SP SPG +
Sbjct: 57 VSPGRAPVS--PGRAPVSPGRAPVSPGTVPVSPGRAPVSP--GRAPVSPGERAPVSPGRA 112
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
P SPG +P SPG +P SPG +P SPG P SPG +P SP +P SPG +P SP +P SP
Sbjct: 113 PVSPGRAPVSPGRAPVSPGRAPVSPGRVPVSPGRAPVSPGRAPVSPGRAPVSPGRAPVSP 172
Query: 392 SYSPTSP 412
P SP
Sbjct: 173 GTVPVSP 179
Score = 88.6 bits (218), Expect = 2e-16
Identities = 58/131 (44%), Positives = 72/131 (54%), Gaps = 8/131 (6%)
Frame = +2
Query: 44 MTPGRSPIS-GT-PYHEGM--MSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTS---S 199
++PGR+P+S GT P G +SP +SP A SP G SP + S
Sbjct: 212 VSPGRAPVSPGTVPVSPGRAPVSPGRAPVSPGRAPVSPGRAPVSP--GRAPVSPGTVPVS 269
Query: 200 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
PG +P SPG +P SPG +P SPG +P SPG P SPG P SP P SPG +P SP +
Sbjct: 270 PGRAPVSPGRAPVSPGRAPVSPGRAPVSPGTVPVSPGTVPVSPGTVPVSPGRAPVSPGRA 329
Query: 380 PTSPSYSPTSP 412
P SP +P SP
Sbjct: 330 PVSPGRAPVSP 340
Score = 88.6 bits (218), Expect = 2e-16
Identities = 53/126 (42%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS---SPGYSP 214
++PGR+P+S P + +SP A SP G + SP SPG +P
Sbjct: 226 VSPGRAPVS--PGRAPVSPGRAPVSPGRAPVSPGRAPVSP--GTVPVSPGRAPVSPGRAP 281
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
SPG +P SPG +P SPG P SPG P SPG P SP +P SPG +P SP +P SP
Sbjct: 282 VSPGRAPVSPGRAPVSPGTVPVSPGTVPVSPGTVPVSPGRAPVSPGRAPVSPGRAPVSPG 341
Query: 395 YSPTSP 412
+P SP
Sbjct: 342 RAPVSP 347
Score = 88.2 bits (217), Expect = 3e-16
Identities = 58/138 (42%), Positives = 74/138 (53%), Gaps = 15/138 (10%)
Frame = +2
Query: 44 MTPGRSPIS--------GT-PYHEGM--MSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFS 187
++PGR+P+S GT P G +SP +SP A SP G S
Sbjct: 163 VSPGRAPVSPGTVPVSPGTVPVSPGRAPVSPGRAPVSPGRAPVSPGRAPVSP--GRAPVS 220
Query: 188 PTS---SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 358
P + SPG +P SPG +P SPG +P SPG +P SPG +P SPG P SP +P SPG +
Sbjct: 221 PGTVPVSPGRAPVSPGRAPVSPGRAPVSPGRAPVSPGRAPVSPGTVPVSPGRAPVSPGRA 280
Query: 359 PTSPAYSPTSPSYSPTSP 412
P SP +P SP +P SP
Sbjct: 281 PVSPGRAPVSPGRAPVSP 298
Score = 87.4 bits (215), Expect = 4e-16
Identities = 51/126 (40%), Positives = 67/126 (53%), Gaps = 3/126 (2%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS---SPGYSP 214
++PGR+P+S P + +SP SP G + SP + SPG +P
Sbjct: 268 VSPGRAPVS--PGRAPVSPGRAPVSPGRAPVSPGTVPVSP--GTVPVSPGTVPVSPGRAP 323
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
SPG +P SPG +P SPG +P SPG P SPG +P SP P SPG +P P +P SP
Sbjct: 324 VSPGRAPVSPGRAPVSPGRAPVSPGTVPVSPGRAPVSPGTVPVSPGRAPVPPGRAPVSPG 383
Query: 395 YSPTSP 412
+P SP
Sbjct: 384 RAPVSP 389
Score = 86.7 bits (213), Expect = 8e-16
Identities = 52/126 (41%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS---SPGYSP 214
++PGR+P+S P + +SP SP G SP SPG +P
Sbjct: 191 VSPGRAPVS--PGRAPVSPGRAPVSPGRAPVSPGTVPVSP--GRAPVSPGRAPVSPGRAP 246
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
SPG +P SPG +P SPG P SPG +P SPG +P SP +P SPG +P SP P SP
Sbjct: 247 VSPGRAPVSPGRAPVSPGTVPVSPGRAPVSPGRAPVSPGRAPVSPGRAPVSPGTVPVSPG 306
Query: 395 YSPTSP 412
P SP
Sbjct: 307 TVPVSP 312
Score = 82.8 bits (203), Expect = 1e-14
Identities = 50/126 (39%), Positives = 65/126 (51%), Gaps = 3/126 (2%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS---SPGYSP 214
++PGR+P+S P + +SP SP G + SP SPG +P
Sbjct: 275 VSPGRAPVS--PGRAPVSPGRAPVSPGTVPVSPGTVPVSP--GTVPVSPGRAPVSPGRAP 330
Query: 215 SSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPS 394
SPG +P SPG +P SPG P SPG +P SPG P SP +P PG +P SP +P SP
Sbjct: 331 VSPGRAPVSPGRAPVSPGTVPVSPGRAPVSPGTVPVSPGRAPVPPGRAPVSPGRAPVSPG 390
Query: 395 YSPTSP 412
T+P
Sbjct: 391 SPGTAP 396
Score = 81.6 bits (200), Expect = 2e-14
Identities = 57/130 (43%), Positives = 70/130 (53%), Gaps = 8/130 (6%)
Frame = +2
Query: 44 MTPGRSPIS-GT-PYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS---SPGY 208
++PGR+P+S GT P G + S P +SP A SP G SP SPG
Sbjct: 289 VSPGRAPVSPGTVPVSPGTVPVSPGTVP---VSPGR-APVSP--GRAPVSPGRAPVSPGR 342
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSP---TYSPSSPGYSPTSPAYS 379
+P SPG P SPG +P SPG P SPG +P PG +P SP SP SPG +P SP +
Sbjct: 343 APVSPGTVPVSPGRAPVSPGTVPVSPGRAPVPPGRAPVSPGRAPVSPGSPGTAPVSPGRA 402
Query: 380 PTSPSYSPTS 409
P SP +P S
Sbjct: 403 PVSPGRAPVS 412
Score = 81.3 bits (199), Expect = 3e-14
Identities = 56/129 (43%), Positives = 72/129 (55%), Gaps = 7/129 (5%)
Frame = +2
Query: 47 TPGRSPIS-GT-PYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSP----GY 208
+PGR+P+S GT P G + S +P +SP A SP G SP +P
Sbjct: 1 SPGRAPVSPGTVPVSPGTVPVSPGRAP---VSPGR-APVSP--GRAPVSPGRAPVSPGRR 54
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-YSPTSPAYSPT 385
+P SPG +P SPG +P SPG +P SPG P SPG +P SP +P SPG +P SP +P
Sbjct: 55 APVSPGRAPVSPGRAPVSPGRAPVSPGTVPVSPGRAPVSPGRAPVSPGERAPVSPGRAPV 114
Query: 386 SPSYSPTSP 412
SP +P SP
Sbjct: 115 SPGRAPVSP 123
Score = 58.5 bits (140), Expect = 2e-07
Identities = 43/109 (39%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS---SPGYSP 214
++PGR+P+S +P +SP A SP G + SP SPG P
Sbjct: 317 VSPGRAPVSPG------RAP---VSPGRAPVSPGRAPVSP--GTVPVSPGRAPVSPGTVP 365
Query: 215 SSPGYSPSSPGYSPTSPG---YSPTSPGYSPTSPGYSPTSPTYSPSSPG 352
SPG +P PG +P SPG SP SPG +P SPG +P SP +P S G
Sbjct: 366 VSPGRAPVPPGRAPVSPGRAPVSPGSPGTAPVSPGRAPVSPGRAPVSQG 414
[215][TOP]
>UniRef100_B9G524 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9G524_ORYSJ
Length = 536
Score = 88.6 bits (218), Expect = 2e-16
Identities = 51/125 (40%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Frame = +2
Query: 59 SPISGTPYH---EGMMSPS----YMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
SP TPY E + SP Y P + SP + +PY P S P Y PS
Sbjct: 290 SPPEITPYPSPPEVVPSPPKITPYPSPPEVTPSPP---EITPYPSPPDIVP-SPPSYEPS 345
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
P Y PS P Y+P P Y+P PG P+ P YSP P+Y PS P Y+P P+Y P+ P Y
Sbjct: 346 PPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEY 405
Query: 398 SPTSP 412
+P P
Sbjct: 406 APEPP 410
Score = 80.5 bits (197), Expect = 5e-14
Identities = 45/123 (36%), Positives = 62/123 (50%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+TP SP TP + Y P++ SP + P ++ P S P Y+P P
Sbjct: 310 ITPYPSPPEVTPSPPEITP--YPSPPDIVPSPPSYEPSPP-----SYEP-SPPEYAPEPP 361
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
Y+P PG P+ P YSP P Y P+ P Y+P P+Y PS P Y+P P Y+P P +P
Sbjct: 362 VYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGITP 421
Query: 404 TSP 412
+ P
Sbjct: 422 SPP 424
Score = 77.8 bits (190), Expect = 3e-13
Identities = 32/71 (45%), Positives = 41/71 (57%)
Frame = +2
Query: 200 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
P Y+P PG PS P YSP P Y P+ P Y+P P Y P+ P Y+P P Y+P P +
Sbjct: 361 PVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGIT 420
Query: 380 PTSPSYSPTSP 412
P+ P Y+P P
Sbjct: 421 PSPPEYAPEPP 431
Score = 76.3 bits (186), Expect = 1e-12
Identities = 46/121 (38%), Positives = 58/121 (47%), Gaps = 1/121 (0%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSP-NLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
+TP SP P PSY SP + SP A P ++P PG PS
Sbjct: 326 ITPYPSPPDIVP-----SPPSYEPSPPSYEPSPPEYAPEPP-----VYAPYP-PGIFPSP 374
Query: 221 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 400
P YSP P Y P+ P Y+P P Y P+ P Y+P P Y+P PG +P+ P Y+P P
Sbjct: 375 PEYSPEPPSYVPSPPQYAPQPPSYVPSPPEYAPEPPVYAPYPPGITPSPPEYAPEPPPGP 434
Query: 401 P 403
P
Sbjct: 435 P 435
Score = 59.3 bits (142), Expect = 1e-07
Identities = 41/127 (32%), Positives = 57/127 (44%), Gaps = 4/127 (3%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+TP SP TP + Y P + SP + +PY S P PS P
Sbjct: 262 ITPYPSPPEVTPGPPEITP--YPSPPEITPSPP---EITPY--------PSPPEVVPSPP 308
Query: 224 GYSP--SSPGYSPTSPGYSP--TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
+P S P +P+ P +P + P P+ P Y P+ P+Y PS P Y+P P Y+P P
Sbjct: 309 KITPYPSPPEVTPSPPEITPYPSPPDIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPP 368
Query: 392 SYSPTSP 412
P+ P
Sbjct: 369 GIFPSPP 375
[216][TOP]
>UniRef100_UPI000186AAB5 hypothetical protein BRAFLDRAFT_132198 n=1 Tax=Branchiostoma floridae
RepID=UPI000186AAB5
Length = 1133
Score = 87.8 bits (216), Expect = 3e-16
Identities = 43/92 (46%), Positives = 44/92 (47%)
Frame = +2
Query: 137 PTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYS 316
P Q SPY GG P Y P P Y P PGY P PGY P PGY P PGY
Sbjct: 1019 PQPSPQPSPYPGGKPDQP-----YPPDQP-YPPPQPGYPPQQPGY-PPQPGYPPQQPGYP 1071
Query: 317 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P P Y P PGY P P Y P P+Y P P
Sbjct: 1072 PQQPGYPPQQPGYPPQQPGYPPQQPAYPPQQP 1103
Score = 86.7 bits (213), Expect = 8e-16
Identities = 39/84 (46%), Positives = 41/84 (48%)
Frame = +2
Query: 161 PYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 340
PY P PGY P PGY P PGY P PGY P PGY P PGY P P Y P
Sbjct: 1042 PYPPPQPGYPPQQPGYPPQ-PGYPPQQPGYPPQQPGYPPQQPGYPPQQPGYPPQQPAYPP 1100
Query: 341 SSPGYSPTSPAYSPTSPSYSPTSP 412
PGY P P P Y P++P
Sbjct: 1101 QQPGYPPQG---EPAPPPYHPSAP 1121
Score = 77.8 bits (190), Expect = 3e-13
Identities = 34/72 (47%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +2
Query: 200 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY----SPSSPGYSPTS 367
PGY P PGY P PGY P PGY P PGY P P Y P P Y P+ P Y P++
Sbjct: 1061 PGYPPQQPGYPPQQPGYPPQQPGYPPQQPGYPPQQPAYPPQQPGYPPQGEPAPPPYHPSA 1120
Query: 368 PAYSPTSPSYSP 403
P P P+Y P
Sbjct: 1121 PP-PPQDPAYPP 1131
Score = 68.2 bits (165), Expect = 3e-10
Identities = 31/65 (47%), Positives = 32/65 (49%)
Frame = +2
Query: 188 PTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTS 367
P PGY P PGY P PGY P P Y P PGY P P P Y PS+P P
Sbjct: 1071 PPQQPGYPPQQPGYPPQQPGYPPQQPAYPPQQPGYPPQG---EPAPPPYHPSAPP-PPQD 1126
Query: 368 PAYSP 382
PAY P
Sbjct: 1127 PAYPP 1131
[217][TOP]
>UniRef100_B8BEN2 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8BEN2_ORYSI
Length = 519
Score = 87.8 bits (216), Expect = 3e-16
Identities = 51/125 (40%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Frame = +2
Query: 59 SPISGTPYH---EGMMSPS----YMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
SP TPY E + SP Y P + SP + +PY P S P Y PS
Sbjct: 253 SPPEITPYPSPPEVVPSPPEITPYPSPPEVTPSPP---EITPYPSPPEIVP-SPPSYEPS 308
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
P Y PS P Y+P P Y+P PG P+ P YSP P+Y PS P Y+P P+Y P+ P Y
Sbjct: 309 PPSYEPSPPEYAPEPPVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPVY 368
Query: 398 SPTSP 412
+P P
Sbjct: 369 APYPP 373
Score = 79.7 bits (195), Expect = 9e-14
Identities = 45/123 (36%), Positives = 61/123 (49%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+TP SP TP + Y P + SP + P ++ P S P Y+P P
Sbjct: 273 ITPYPSPPEVTPSPPEITP--YPSPPEIVPSPPSYEPSPP-----SYEP-SPPEYAPEPP 324
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
Y+P PG P+ P YSP P Y P+ P Y+P P+Y PS P Y+P P +P+ P Y+P
Sbjct: 325 VYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPVYAPYPPGITPSPPEYAP 384
Query: 404 TSP 412
P
Sbjct: 385 EPP 387
Score = 73.9 bits (180), Expect = 5e-12
Identities = 31/68 (45%), Positives = 39/68 (57%)
Frame = +2
Query: 200 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
P Y+P PG PS P YSP P Y P+ P Y+P P Y P+ P Y+P PG +P+ P Y+
Sbjct: 324 PVYAPYPPGIFPSPPEYSPEPPSYVPSPPQYAPQPPSYVPSPPVYAPYPPGITPSPPEYA 383
Query: 380 PTSPSYSP 403
P P P
Sbjct: 384 PEPPPGPP 391
Score = 67.8 bits (164), Expect = 4e-10
Identities = 50/136 (36%), Positives = 62/136 (45%), Gaps = 13/136 (9%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSP-NLRLSPTNDAQ----FSPYVGGMAFSPTSSPGY 208
+TP SP P PSY SP + SP A ++PY G+ SP P Y
Sbjct: 289 ITPYPSPPEIVP-----SPPSYEPSPPSYEPSPPEYAPEPPVYAPYPPGIFPSP---PEY 340
Query: 209 SPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSP--------GYSPT 364
SP P Y PS P Y+P P Y P+ P Y+P PG +P+ P Y+P P GY P
Sbjct: 341 SPEPPSYVPSPPQYAPQPPSYVPSPPVYAPYPPGITPSPPEYAPEPPPGPPGGGGGYLP- 399
Query: 365 SPAYSPTSPSYSPTSP 412
P P P Y+ P
Sbjct: 400 -PVVFP--PPYASRGP 412
Score = 58.2 bits (139), Expect = 3e-07
Identities = 43/127 (33%), Positives = 58/127 (45%), Gaps = 4/127 (3%)
Frame = +2
Query: 44 MTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
+TPG I TPY PS P + SP + +PY S P PS P
Sbjct: 234 VTPGPPEI--TPY------PS---PPEVTPSPP---EITPY--------PSPPEVVPSPP 271
Query: 224 GYSP--SSPGYSPTSPGYSP--TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
+P S P +P+ P +P + P P+ P Y P+ P+Y PS P Y+P P Y+P P
Sbjct: 272 EITPYPSPPEVTPSPPEITPYPSPPEIVPSPPSYEPSPPSYEPSPPEYAPEPPVYAPYPP 331
Query: 392 SYSPTSP 412
P+ P
Sbjct: 332 GIFPSPP 338
[218][TOP]
>UniRef100_A4RMP1 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4RMP1_MAGGR
Length = 1757
Score = 87.8 bits (216), Expect = 3e-16
Identities = 66/161 (40%), Positives = 79/161 (49%), Gaps = 36/161 (22%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
+G SP++G MM + + SP++ + F P M S GYSP+
Sbjct: 1578 YGSYSPTSPMAGYSPTSPMMDGGRYGASSPSFSPSSPS-FQPTSPIMRHGAGDSMGYSPT 1636
Query: 218 SPGYSPSSPG-----YSPTSP---GYSPTSPGYSPTSPGYSP---TSPTY--------SP 340
SP Y P SP YSPTSP G SPTSP YSP SP +SP TSP Y SP
Sbjct: 1637 SPTYQPGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPSFSPGGATSPMYYVGSPQHASP 1696
Query: 341 SSPG--YSPTSPA---------------YSPTSPSYSPTSP 412
+SP YSPTSP+ YSPTSPS+SP SP
Sbjct: 1697 TSPNAHYSPTSPSFQRSPAQASPTSPGPYSPTSPSFSPRSP 1737
Score = 80.9 bits (198), Expect = 4e-14
Identities = 67/143 (46%), Positives = 80/143 (55%), Gaps = 24/143 (16%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
G + G SP S T Y G SP+ + SPT+ AQF SPTS P YSP+S
Sbjct: 1628 GDSMGYSPTSPT-YQPG--SPT---GGDNHYSPTSPAQFGA-------SPTS-PLYSPAS 1673
Query: 221 PGYSP---SSPGY--------SPTSPG--YSPTSPGY-------SPTSPG-YSPTSPTYS 337
P +SP +SP Y SPTSP YSPTSP + SPTSPG YSPTSP++S
Sbjct: 1674 PSFSPGGATSPMYYVGSPQHASPTSPNAHYSPTSPSFQRSPAQASPTSPGPYSPTSPSFS 1733
Query: 338 PSSPGYSPTS---PAYSPTSPSY 397
P SPG + S +YSPTSPS+
Sbjct: 1734 PRSPGRNNRSGGQDSYSPTSPSH 1756
Score = 79.3 bits (194), Expect = 1e-13
Identities = 67/159 (42%), Positives = 82/159 (51%), Gaps = 29/159 (18%)
Frame = +2
Query: 23 MDGLDFGMT-PGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQF--SPYVGGMAFSPT 193
MDG +G + P SP S + + ++ SPT+ SP G +SPT
Sbjct: 1597 MDGGRYGASSPSFSP-SSPSFQPTSPIMRHGAGDSMGYSPTSPTYQPGSPTGGDNHYSPT 1655
Query: 194 SSP--GYSPSSPGYSPSSPGYSP---TSPGY--------SPTSPG--YSPTSPGY----- 313
S G SP+SP YSP+SP +SP TSP Y SPTSP YSPTSP +
Sbjct: 1656 SPAQFGASPTSPLYSPASPSFSPGGATSPMYYVGSPQHASPTSPNAHYSPTSPSFQRSPA 1715
Query: 314 --SPTSP-TYSPSSPGYSPTSPAYSPTS---PSYSPTSP 412
SPTSP YSP+SP +SP SP + S SYSPTSP
Sbjct: 1716 QASPTSPGPYSPTSPSFSPRSPGRNNRSGGQDSYSPTSP 1754
Score = 64.3 bits (155), Expect = 4e-09
Identities = 59/140 (42%), Positives = 73/140 (52%), Gaps = 12/140 (8%)
Frame = +2
Query: 29 GLDFGMTPGRSPISG--TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSP 202
GL G+T S G TPY G SP NL ++ FSP + G + +PT
Sbjct: 1483 GLMPGLTVKGSSAEGAATPYDTG--SPMGDSGYNLGMASPTMGNFSPIMSGGSDTPT--- 1537
Query: 203 GYSPSSPGYSPSS--PGYSPTSPGYSPTSP-GYSPTSPGYSPTSPTYSPSSP--GYSPTS 367
G++ G S S P S TSP PTSP SPTSP +S +YSP+SP GYSPTS
Sbjct: 1538 GFATEYGGGSLGSMNPYGSGTSP--RPTSPFSTSPTSP-FSAGYGSYSPTSPMAGYSPTS 1594
Query: 368 PA-----YSPTSPSYSPTSP 412
P Y +SPS+SP+SP
Sbjct: 1595 PMMDGGRYGASSPSFSPSSP 1614
Score = 63.5 bits (153), Expect = 7e-09
Identities = 48/121 (39%), Positives = 60/121 (49%), Gaps = 14/121 (11%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSP 190
P+Y G G SP S + SP Y SP+ SP YVG +
Sbjct: 1638 PTYQPGSPTGGDNHYSPTSPAQFGASPTSPLYSPASPSF--SPGGATSPMYYVGSPQHAS 1695
Query: 191 TSSPG--YSPSSPGY-------SPSSPG-YSPTSPGYSPTSPGYSPTSPG---YSPTSPT 331
+SP YSP+SP + SP+SPG YSPTSP +SP SPG + S G YSPTSP+
Sbjct: 1696 PTSPNAHYSPTSPSFQRSPAQASPTSPGPYSPTSPSFSPRSPGRNNRSGGQDSYSPTSPS 1755
Query: 332 Y 334
+
Sbjct: 1756 H 1756
[219][TOP]
>UniRef100_UPI000069ED41 UPI000069ED41 related cluster n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI000069ED41
Length = 403
Score = 86.7 bits (213), Expect = 8e-16
Identities = 54/131 (41%), Positives = 60/131 (45%)
Frame = +2
Query: 11 LPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
L S L G +P +S S P G SP + + +SP G +SP
Sbjct: 205 LQSVYSPLQSGYSPLQSVYS--PLQSGYSPLQSGYSPLQSVYSPLQSGYSPLQSG--YSP 260
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
S GYSP GYSP GYSP GYSP GYSP GYSP YSP GYSP
Sbjct: 261 LQS-GYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQS 319
Query: 371 AYSPTSPSYSP 403
YSP YSP
Sbjct: 320 GYSPLQSGYSP 330
Score = 85.5 bits (210), Expect = 2e-15
Identities = 43/83 (51%), Positives = 45/83 (54%)
Frame = +2
Query: 155 FSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY 334
+SP G +SP S GYSP GYSP GYSP GYSP GYSP GYSP Y
Sbjct: 279 YSPLQSG--YSPLQS-GYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSVY 335
Query: 335 SPSSPGYSPTSPAYSPTSPSYSP 403
SP GYSP YSP YSP
Sbjct: 336 SPLQSGYSPLQSGYSPLQSGYSP 358
Score = 84.7 bits (208), Expect = 3e-15
Identities = 43/83 (51%), Positives = 45/83 (54%)
Frame = +2
Query: 155 FSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY 334
+SP G +SP S GYSP GYSP GYSP GYSP GYSP GYSP Y
Sbjct: 265 YSPLQSG--YSPLQS-GYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSGY 321
Query: 335 SPSSPGYSPTSPAYSPTSPSYSP 403
SP GYSP YSP YSP
Sbjct: 322 SPLQSGYSPLQSVYSPLQSGYSP 344
Score = 80.1 bits (196), Expect = 7e-14
Identities = 57/142 (40%), Positives = 67/142 (47%), Gaps = 11/142 (7%)
Frame = +2
Query: 11 LPSYMDGLDFGMTP---GRSPI-SGTPYHEGMMSPSYMLSPNLR--LSPTNDAQFSPYVG 172
L S L G +P G SP+ SG + + SP + L+ SP +SP
Sbjct: 93 LQSVYSPLQSGYSPLQSGYSPLQSGYSPLQSVYSPLQSVYSPLQSGYSPLQ-LVYSPLQS 151
Query: 173 GMA-----FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS 337
G + +SP+ S GYSP YSPS GYSP YSP GYSP GYSP YS
Sbjct: 152 GYSPLQSVYSPSQS-GYSPLQSVYSPSQSGYSPLQLVYSPLQSGYSPLQSGYSPLQSVYS 210
Query: 338 PSSPGYSPTSPAYSPTSPSYSP 403
P GYSP YSP YSP
Sbjct: 211 PLQSGYSPLQSVYSPLQSGYSP 232
Score = 80.1 bits (196), Expect = 7e-14
Identities = 42/82 (51%), Positives = 44/82 (53%)
Frame = +2
Query: 155 FSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY 334
+SP G +SP S GYSP GYSP GYSP GYSP GYSP YSP Y
Sbjct: 286 YSPLQSG--YSPLQS-GYSPLQSGYSPLQSGYSPLQSGYSPLQSGYSPLQSVYSPLQSGY 342
Query: 335 SPSSPGYSPTSPAYSPTSPSYS 400
SP GYSP YSP SYS
Sbjct: 343 SPLQSGYSPLQSGYSPLQSSYS 364
Score = 79.7 bits (195), Expect = 9e-14
Identities = 48/119 (40%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Frame = +2
Query: 53 GRSPISG--TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
G SP+ +P G + SP+ +SP G +SP S GYSP
Sbjct: 152 GYSPLQSVYSPSQSGYSPLQSVYSPSQSGYSPLQLVYSPLQSG--YSPLQS-GYSPLQSV 208
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
YSP GYSP YSP GYSP GYSP YSP GYSP YSP YSP
Sbjct: 209 YSPLQSGYSPLQSVYSPLQSGYSPLQSGYSPLQSVYSPLQSGYSPLQSGYSPLQSGYSP 267
Score = 75.1 bits (183), Expect = 2e-12
Identities = 50/124 (40%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Frame = +2
Query: 56 RSPISGTPYHEGMMSPSYMLSPNLRL--SPTNDAQ------FSPYVGGMAFSPTSSPGYS 211
R PIS + + SP + L+L SP +SP G +SP S YS
Sbjct: 35 RQPISVYSPLQSVYSPLQSVYSPLQLVYSPLQSGYSPLQLVYSPLQSG--YSPLQSV-YS 91
Query: 212 PSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSP 391
P YSP GYSP GYSP GYSP YSP YSP GYSP YSP
Sbjct: 92 PLQSVYSPLQSGYSPLQSGYSPLQSGYSPLQSVYSPLQSVYSPLQSGYSPLQLVYSPLQS 151
Query: 392 SYSP 403
YSP
Sbjct: 152 GYSP 155
Score = 70.5 bits (171), Expect = 6e-11
Identities = 50/126 (39%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Frame = +2
Query: 53 GRSPIS--GTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
G SP+ +P G + SP + + +SP G +SP S GYSP
Sbjct: 68 GYSPLQLVYSPLQSGYSPLQSVYSPLQSVYSPLQSGYSPLQSG--YSPLQS-GYSPLQSV 124
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP----TSP- 391
YSP YSP GYSP YSP GYSP YSPS GYSP YSP SP
Sbjct: 125 YSPLQSVYSPLQSGYSPLQLVYSPLQSGYSPLQSVYSPSQSGYSPLQSVYSPSQSGYSPL 184
Query: 392 --SYSP 403
YSP
Sbjct: 185 QLVYSP 190
Score = 65.9 bits (159), Expect = 1e-09
Identities = 39/90 (43%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Frame = +2
Query: 155 FSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY 334
+SP G +SP S GYSP GYSP GYSP YSP GYSP GYSP Y
Sbjct: 300 YSPLQSG--YSPLQS-GYSPLQSGYSPLQSGYSPLQSVYSPLQSGYSPLQSGYSPLQSGY 356
Query: 335 SPSSPGYSPTSPAYSPTS----PSYSPTSP 412
SP YS P+ P PT P
Sbjct: 357 SPLQSSYSQAQVCGCPSDLLPCPFPPPTPP 386
Score = 58.5 bits (140), Expect = 2e-07
Identities = 37/89 (41%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Frame = +2
Query: 155 FSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY 334
+SP G +SP S GYSP YSP GYSP GYSP GYSP YS
Sbjct: 314 YSPLQSG--YSPLQS-GYSPLQSVYSPLQSGYSPLQSGYSPLQSGYSPLQSSYSQAQVCG 370
Query: 335 SPSS----PGYSPTSPAYSPTSPSYSPTS 409
PS P PT P P+ P P+S
Sbjct: 371 CPSDLLPCPFPPPTPPIPLPSPPISPPSS 399
[220][TOP]
>UniRef100_Q9AXN1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Botryocladia
uvarioides RepID=Q9AXN1_9FLOR
Length = 1712
Score = 86.3 bits (212), Expect = 1e-15
Identities = 63/145 (43%), Positives = 78/145 (53%), Gaps = 30/145 (20%)
Frame = +2
Query: 59 SPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYV----------GGMAFSPTSSPG- 205
SP +PY SP+Y SP + + A SP GG SP SPG
Sbjct: 1545 SPGRASPY---ATSPAYPQSPGSYNAGSGFAPASPAYKVTSPAPGGYGGAYQSPARSPGA 1601
Query: 206 -YSPSSPGYSPSSPGYSP-TSPG------YSPTSPGYSPT-SPGY------SPTSP-TYS 337
YSP+SP ++P+SPGYS T PG YSPT P Y+ SPGY SP SP TYS
Sbjct: 1602 QYSPTSPAFTPTSPGYSSATGPGRPGTGAYSPTGPSYNAAASPGYQSGINYSPGSPHTYS 1661
Query: 338 PSSPGYSPTSPA---YSPTSPSYSP 403
P+SP ++P SPA YSP++P Y+P
Sbjct: 1662 PNSPVFTPRSPAAHGYSPSTPQYNP 1686
Score = 79.3 bits (194), Expect = 1e-13
Identities = 57/144 (39%), Positives = 72/144 (50%), Gaps = 38/144 (26%)
Frame = +2
Query: 95 MSPSYMLSPNLRLSPTNDAQFSPYVGGMAF-----SPTSSPGYSPSSPGYSPSSPG---- 247
MSP SP + SP + SPY A+ S + G++P+SP Y +SP
Sbjct: 1532 MSPGGAASPYVSASP---GRASPYATSPAYPQSPGSYNAGSGFAPASPAYKVTSPAPGGY 1588
Query: 248 --------------YSPTSPGYSPTSPGY-SPTSPG------YSPTSPTY-SPSSPG--- 352
YSPTSP ++PTSPGY S T PG YSPT P+Y + +SPG
Sbjct: 1589 GGAYQSPARSPGAQYSPTSPAFTPTSPGYSSATGPGRPGTGAYSPTGPSYNAAASPGYQS 1648
Query: 353 ---YSPTSP-AYSPTSPSYSPTSP 412
YSP SP YSP SP ++P SP
Sbjct: 1649 GINYSPGSPHTYSPNSPVFTPRSP 1672
Score = 63.5 bits (153), Expect = 7e-09
Identities = 54/169 (31%), Positives = 66/169 (39%), Gaps = 66/169 (39%)
Frame = +2
Query: 92 MMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT-------------------------- 193
M +PS M S S N QFSP +FSP+
Sbjct: 1471 MWAPSRMGSTRGGPSAFNVQQFSPSADEASFSPSPATPGNFGQNANAYTPLQSPRGDYMP 1530
Query: 194 -SSPG-----YSPSSPGYS---------PSSPGYSPTSPGYSPTSPGYSPTSPG------ 310
SPG Y +SPG + P SPG G++P SP Y TSP
Sbjct: 1531 PMSPGGAASPYVSASPGRASPYATSPAYPQSPGSYNAGSGFAPASPAYKVTSPAPGGYGG 1590
Query: 311 ------------YSPTSPTYSPSSPGYS-------PTSPAYSPTSPSYS 400
YSPTSP ++P+SPGYS P + AYSPT PSY+
Sbjct: 1591 AYQSPARSPGAQYSPTSPAFTPTSPGYSSATGPGRPGTGAYSPTGPSYN 1639
[221][TOP]
>UniRef100_UPI0000F3065A UPI0000F3065A related cluster n=1 Tax=Bos taurus
RepID=UPI0000F3065A
Length = 540
Score = 85.5 bits (210), Expect = 2e-15
Identities = 38/77 (49%), Positives = 44/77 (57%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
F P SP + P SPG+ SPG+ P SP ++P SP SP + P SP Y P SPGY P
Sbjct: 72 FEP-QSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDSQSPDFEPQSPRYEPQSPGYEP 130
Query: 362 TSPAYSPTSPSYSPTSP 412
SP Y P SP Y SP
Sbjct: 131 KSPGYEPRSPGYGTQSP 147
Score = 85.1 bits (209), Expect = 2e-15
Identities = 35/72 (48%), Positives = 43/72 (59%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPG+ P SP + P SP + P SPG+ SPG+ P SP ++P SP SP + P SP Y
Sbjct: 62 SPGFGPQSPEFEPQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDSQSPDFEPQSPRY 121
Query: 377 SPTSPSYSPTSP 412
P SP Y P SP
Sbjct: 122 EPQSPGYEPKSP 133
Score = 85.1 bits (209), Expect = 2e-15
Identities = 38/77 (49%), Positives = 44/77 (57%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
F P SPG+ SPG+ P SP ++P SP SP + P SP Y P SP Y P SPGY P
Sbjct: 79 FEP-ESPGFESRSPGFVPPSPEFAPRSPESDSQSPDFEPQSPRYEPQSPGYEPKSPGYEP 137
Query: 362 TSPAYSPTSPSYSPTSP 412
SP Y SP Y P +P
Sbjct: 138 RSPGYGTQSPEYEPQNP 154
Score = 84.0 bits (206), Expect = 5e-15
Identities = 36/72 (50%), Positives = 42/72 (58%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPG+ P SP ++P SP SP + P SP Y P SPGY P SP Y P SPGY SP Y
Sbjct: 90 SPGFVPPSPEFAPRSPESDSQSPDFEPQSPRYEPQSPGYEPKSPGYEPRSPGYGTQSPEY 149
Query: 377 SPTSPSYSPTSP 412
P +P + SP
Sbjct: 150 EPQNPEFKTQSP 161
Score = 73.6 bits (179), Expect = 7e-12
Identities = 33/72 (45%), Positives = 39/72 (54%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
F+P S P SP + P SP Y P SPGY P SPGY P SPGY SP Y P +P +
Sbjct: 100 FAPRS-PESDSQSPDFEPQSPRYEPQSPGYEPKSPGYEPRSPGYGTQSPEYEPQNPEFKT 158
Query: 362 TSPAYSPTSPSY 397
SP + S +
Sbjct: 159 QSPEFEAESSKF 170
[222][TOP]
>UniRef100_Q1WKU4 Putative RNA polymerase II 215 kD subunit (Fragment) n=1
Tax=Drosophila erecta RepID=Q1WKU4_DROER
Length = 760
Score = 85.5 bits (210), Expect = 2e-15
Identities = 56/143 (39%), Positives = 71/143 (49%), Gaps = 15/143 (10%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G++ T G S + G G S M P + N ++ G ++ P +
Sbjct: 617 GIEIPNTLGSSMLGGAAMFIGGGSTPSMTPPMTPWANCNTPRYFSPPGHVSAMTPGGPSF 676
Query: 209 SPSSPG-YSPSSPGYSPTSPGYSPTSPG-----YSP----TSPGYSPTSPTYSPSSPG-- 352
SPS+ S SP +SP PG SP+SPG Y P SP YSPTSP Y+ SSPG
Sbjct: 677 SPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPGGA 736
Query: 353 ---YSPTSPAYSPTSPSYSPTSP 412
YSP+SP YSPTSP Y+ SP
Sbjct: 737 SPNYSPSSPNYSPTSPLYASASP 759
[223][TOP]
>UniRef100_UPI00017932FD PREDICTED: similar to Cuticular protein 76Bd CG9299-PB n=1
Tax=Acyrthosiphon pisum RepID=UPI00017932FD
Length = 670
Score = 85.1 bits (209), Expect = 2e-15
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMS-PSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
PSY + P SP + T + S P + SP P + +P ++S
Sbjct: 439 PSYDSKQSYAPAPAYSPAAYTSSKQSYSSAPIAVYSPVASYGPAPEYSAAPSYSAPSYSA 498
Query: 191 TSS---PGYSPSSPGYSPSSPGYSPT-SPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS 358
+ S YS ++P Y SP Y+P +P Y+P + Y+P +P Y+P +P+Y+P++P Y+
Sbjct: 499 SQSYQSASYSAAAPSYP--SPSYAPAPAPAYAPAAQSYAPAAPSYAPAAPSYAPAAPSYA 556
Query: 359 PTSPAYSPTSPSYSP 403
P +PAY P + SY+P
Sbjct: 557 PAAPAYGPAAQSYAP 571
Score = 70.5 bits (171), Expect = 6e-11
Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
+PSY S + + + + A +P +++P +P Y+P++ Y+P++P Y+P +P Y+P
Sbjct: 493 APSYSASQSYQSASYSAA--APSYPSPSYAPAPAPAYAPAAQSYAPAAPSYAPAAPSYAP 550
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYS-PTSPAYSPT 385
+P Y+P +P Y P + +Y+P+ S T P PT
Sbjct: 551 AAPSYAPAAPAYGPAAQSYAPAKTYASYVTPPKTGPT 587
Score = 56.6 bits (135), Expect = 8e-07
Identities = 45/132 (34%), Positives = 65/132 (49%), Gaps = 20/132 (15%)
Frame = +2
Query: 74 TPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGY-SPSSPGY 250
+P +PSY + + SP +P +++S T++P Y+ P Y SP++P Y
Sbjct: 271 SPVSYSTAAPSYAVPEPVYASPA-----APKYSPVSYS-TAAPSYAVPEPVYASPAAPKY 324
Query: 251 SPTS-----PGY--------SPTSPGYSPTS-----PGYSPTSPTYSPSSPGYSPTSPAY 376
SP S P Y SP +P YSP S P Y+ P Y+ S+P YS +P Y
Sbjct: 325 SPVSYSTPAPSYAVPEPVYASPAAPKYSPVSYSTPAPSYAVPEPVYA-SAPKYSTPAPKY 383
Query: 377 SPTS-PSYSPTS 409
P+S SYS +S
Sbjct: 384 QPSSYNSYSSSS 395
Score = 55.5 bits (132), Expect = 2e-06
Identities = 46/121 (38%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Frame = +2
Query: 80 YHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT----SSPGYSPSSPGYSPSSPG 247
Y + SPS S + S + A S V ++SP S P YS +P YS SS
Sbjct: 187 YSQPKYSPSSYSSSSYSSSSYSTAAPSYAVPSQSYSPAPVSYSQPKYS--APSYSSSS-- 242
Query: 248 YSPTS-----PGYSPTSPGY-SPTSPGYSPTSPTYSPSSPGYSPTSPAY-SPTSPSYSPT 406
YS +S Y+ P Y SP +P YSP S YS ++P Y+ P Y SP +P YSP
Sbjct: 243 YSSSSYSAPAVSYAVPEPNYASPAAPKYSPVS--YSTAAPSYAVPEPVYASPAAPKYSPV 300
Query: 407 S 409
S
Sbjct: 301 S 301
Score = 55.1 bits (131), Expect = 2e-06
Identities = 37/105 (35%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFS-PYVGGMAFSPTSSPGYSPSSPGYSPSS--PGYSPTSPG 268
+PSY +P+ + + A +S P +++ SPS+P YS S Y P
Sbjct: 87 APSYS-APSYSAASYSSASYSAPSYSAQSYAVPDPSYASPSTPKYSSPSYTNNYKPAKAA 145
Query: 269 YS-PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYS 400
YS P P YSP YS +S YS +P Y+ +P+YS S SYS
Sbjct: 146 YSAPAKPAYSPAPAAYSSSS--YSTPAPSYAVPNPSYSSASASYS 188
Score = 54.3 bits (129), Expect = 4e-06
Identities = 39/111 (35%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
+PSY + PN S + + P +SP+S S SS YS ++P Y+ S YSP
Sbjct: 170 APSYAV-PNPSYSSASASYSQP-----KYSPSSYSSSSYSSSSYSTAAPSYAVPSQSYSP 223
Query: 278 TSPGYSP---TSPGYSPTS---PTYSPSSPGYSPTSPAY-SPTSPSYSPTS 409
YS ++P YS +S +YS + Y+ P Y SP +P YSP S
Sbjct: 224 APVSYSQPKYSAPSYSSSSYSSSSYSAPAVSYAVPEPNYASPAAPKYSPVS 274
Score = 53.1 bits (126), Expect = 9e-06
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Frame = +2
Query: 185 SPTSSPGYSPSSPGYS-PSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSS----- 346
SP+ + Y P+ YS P+ P YSP YS +S YS +P Y+ +P+YS +S
Sbjct: 132 SPSYTNNYKPAKAAYSAPAKPAYSPAPAAYSSSS--YSTPAPSYAVPNPSYSSASASYSQ 189
Query: 347 PGYSPTS-PAYSPTSPSYSPTSP 412
P YSP+S + S +S SYS +P
Sbjct: 190 PKYSPSSYSSSSYSSSSYSTAAP 212
[224][TOP]
>UniRef100_UPI0000E241DC PREDICTED: hypothetical protein n=1 Tax=Pan troglodytes
RepID=UPI0000E241DC
Length = 1156
Score = 85.1 bits (209), Expect = 2e-15
Identities = 39/86 (45%), Positives = 45/86 (52%), Gaps = 14/86 (16%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPT--------------Y 334
SPG+ P SP + P SP + P SPG+ SPG P SP ++P SP Y
Sbjct: 671 SPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRY 730
Query: 335 SPSSPGYSPTSPAYSPTSPSYSPTSP 412
P SPGY P SP Y P SP Y P SP
Sbjct: 731 EPQSPGYEPRSPGYEPRSPGYEPRSP 756
Score = 78.2 bits (191), Expect = 3e-13
Identities = 37/76 (48%), Positives = 41/76 (53%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
F P SPG+ SPG P SP ++P SP SP + SP Y P SP Y P SPGY P
Sbjct: 688 FEP-ESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEP 746
Query: 362 TSPAYSPTSPSYSPTS 409
SP Y P SP Y S
Sbjct: 747 RSPGYEPRSPGYESES 762
Score = 75.1 bits (183), Expect = 2e-12
Identities = 34/67 (50%), Positives = 37/67 (55%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPG P SP ++P SP SP + SP Y P SPGY P SP Y P SPGY P SP Y
Sbjct: 699 SPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYEPRSPGY 758
Query: 377 SPTSPSY 397
S Y
Sbjct: 759 ESESSRY 765
Score = 72.4 bits (176), Expect = 1e-11
Identities = 33/72 (45%), Positives = 37/72 (51%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SP ++P SP SP + SP Y P SPGY P SPGY P SP Y P SPGY S Y
Sbjct: 706 SPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYEPRSPGYESESSRY 765
Query: 377 SPTSPSYSPTSP 412
+ SP
Sbjct: 766 ESQNTELKTQSP 777
Score = 70.9 bits (172), Expect = 4e-11
Identities = 38/103 (36%), Positives = 47/103 (45%)
Frame = +2
Query: 89 GMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPG 268
G++ PS +P SP +D+Q SP + SP Y P SPGY P SPG
Sbjct: 701 GLVPPSPEFAPR---SPESDSQ--------------SPEFESQSPRYEPQSPGYEPRSPG 743
Query: 269 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
Y P SPGY P SPGY S Y + SP + S +
Sbjct: 744 YEPRSPGYEPRSPGYESESSRYESQNTELKTQSPEFEAQSSKF 786
Score = 67.4 bits (163), Expect = 5e-10
Identities = 33/76 (43%), Positives = 37/76 (48%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
F+P S P SP + SP Y P SPGY P SPGY P SPGY P SP Y S Y
Sbjct: 709 FAPRS-PESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYEPRSPGYESESSRYES 767
Query: 362 TSPAYSPTSPSYSPTS 409
+ SP + S
Sbjct: 768 QNTELKTQSPEFEAQS 783
Score = 58.9 bits (141), Expect = 2e-07
Identities = 25/56 (44%), Positives = 31/56 (55%)
Frame = +2
Query: 245 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
G P SPG+ P SP + P SP + P SP + SPG P SP ++P SP SP
Sbjct: 666 GLEPQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSP 721
[225][TOP]
>UniRef100_UPI000069F9E1 UPI000069F9E1 related cluster n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI000069F9E1
Length = 153
Score = 84.7 bits (208), Expect = 3e-15
Identities = 38/72 (52%), Positives = 53/72 (73%)
Frame = +2
Query: 194 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
+SP + P+SP + P+SP + PTS + PTSP + PTSP + PTSPT+ P+SP + PTSP
Sbjct: 83 TSPAHFPTSPAHFPTSPTHFPTSHAHFPTSPSH-PTSPAHFPTSPTHFPTSPAHFPTSPT 141
Query: 374 YSPTSPSYSPTS 409
+ PTSP++ PTS
Sbjct: 142 HFPTSPAHFPTS 153
Score = 84.0 bits (206), Expect = 5e-15
Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
Frame = +2
Query: 185 SPTSSP---GYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY 355
SPT P + P+SP + P+SP + PTSP + PTS + PTSP + PTSP + P+SP +
Sbjct: 70 SPTHFPTRHAHFPTSPAHFPTSPAHFPTSPTHFPTSHAHFPTSPSH-PTSPAHFPTSPTH 128
Query: 356 SPTSPAYSPTSPSYSPTSP 412
PTSPA+ PTSP++ PTSP
Sbjct: 129 FPTSPAHFPTSPTHFPTSP 147
Score = 70.9 bits (172), Expect = 4e-11
Identities = 46/112 (41%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQ-FSPYVGGMAFSPTSSPGYSPS----SPGYSP--SSPGYSP 256
+P + P +SPT +P G SP S+ + S S G +P S+P + P
Sbjct: 9 TPGALQVPQPAVSPTPPGPPLTPPQGPHPTSPLSAYKLNASGQEQSEGGAPAKSNPAHFP 68
Query: 257 TSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
TSP + PT + PTSP + PTSP + P+SP + PTS A+ PTSPS+ PTSP
Sbjct: 69 TSPTHFPTRHAHFPTSPAHFPTSPAHFPTSPTHFPTSHAHFPTSPSH-PTSP 119
Score = 55.8 bits (133), Expect = 1e-06
Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 25/98 (25%)
Frame = +2
Query: 194 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSP-GYSPTS---------------------- 304
+ P ++P+ P SPT PG T P G PTS
Sbjct: 2 AGPTWAPTPGALQVPQPAVSPTPPGPPLTPPQGPHPTSPLSAYKLNASGQEQSEGGAPAK 61
Query: 305 --PGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P + PTSPT+ P+ + PTSPA+ PTSP++ PTSP
Sbjct: 62 SNPAHFPTSPTHFPTRHAHFPTSPAHFPTSPAHFPTSP 99
[226][TOP]
>UniRef100_UPI0001B7BF92 zinc finger protein 768 n=1 Tax=Rattus norvegicus
RepID=UPI0001B7BF92
Length = 570
Score = 84.3 bits (207), Expect = 4e-15
Identities = 36/74 (48%), Positives = 43/74 (58%)
Frame = +2
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
+ SP + P SPG+ SPG+ P SP ++P SP P SP + S Y P SPGY P SP
Sbjct: 76 SQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSSRYEPQSPGYDPKSP 135
Query: 371 AYSPTSPSYSPTSP 412
Y P SP Y P SP
Sbjct: 136 GYEPGSPRYEPKSP 149
Score = 82.0 bits (201), Expect = 2e-14
Identities = 38/77 (49%), Positives = 43/77 (55%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
F P SPG+ SPG+ P SP ++P SP P SP + S Y P SP Y P SPGY P
Sbjct: 81 FEP-ESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSSRYEPQSPGYDPKSPGYEP 139
Query: 362 TSPAYSPTSPSYSPTSP 412
SP Y P SP Y SP
Sbjct: 140 GSPRYEPKSPGYGSKSP 156
Score = 79.3 bits (194), Expect = 1e-13
Identities = 36/79 (45%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPG-------Y 355
SPG+ P SP + SP + P SPG+ SPG+ P SP ++P SP P SP Y
Sbjct: 64 SPGFEPQSPEFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSSRY 123
Query: 356 SPTSPAYSPTSPSYSPTSP 412
P SP Y P SP Y P SP
Sbjct: 124 EPQSPGYDPKSPGYEPGSP 142
Score = 79.3 bits (194), Expect = 1e-13
Identities = 35/72 (48%), Positives = 40/72 (55%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPG+ P SP ++P SP P SP + S Y P SPGY P SP Y P SP Y P SP Y
Sbjct: 92 SPGFVPPSPEFAPRSPESDPQSPEFESQSSRYEPQSPGYDPKSPGYEPGSPRYEPKSPGY 151
Query: 377 SPTSPSYSPTSP 412
SP + SP
Sbjct: 152 GSKSPEFESQSP 163
Score = 74.7 bits (182), Expect = 3e-12
Identities = 39/107 (36%), Positives = 49/107 (45%)
Frame = +2
Query: 89 GMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPG 268
G + PS +P SP +D Q + + SPGY P SPGY P SP Y P SPG
Sbjct: 94 GFVPPSPEFAPR---SPESDPQSPEFESQSSRYEPQSPGYDPKSPGYEPGSPRYEPKSPG 150
Query: 269 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
Y SP + SPG SP Y P + G + + SP + S
Sbjct: 151 YGSKSPEFESQSPGCESQSPGYEPQNSGDEVRNSEFKTHSPEFETQS 197
Score = 60.5 bits (145), Expect = 6e-08
Identities = 25/56 (44%), Positives = 32/56 (57%)
Frame = +2
Query: 245 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
G P SPG+ P SP + SP + P SP + SPG+ P SP ++P SP P SP
Sbjct: 59 GLEPQSPGFEPQSPEFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSP 114
Score = 59.7 bits (143), Expect = 1e-07
Identities = 31/88 (35%), Positives = 39/88 (44%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGY 313
SP ++Q S Y SPGY P SP Y P SPGY SP + SPG SPGY
Sbjct: 113 SPEFESQSSRYEPQSPGYDPKSPGYEPGSPRYEPKSPGYGSKSPEFESQSPGCESQSPGY 172
Query: 314 SPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
P + + + SP + S +
Sbjct: 173 EPQNSGDEVRNSEFKTHSPEFETQSSKF 200
[227][TOP]
>UniRef100_Q4DE19 Putative uncharacterized protein n=1 Tax=Trypanosoma cruzi
RepID=Q4DE19_TRYCR
Length = 292
Score = 84.3 bits (207), Expect = 4e-15
Identities = 33/71 (46%), Positives = 33/71 (46%)
Frame = +2
Query: 200 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
PGY P PGY P PGY P PGY PGY PGY P Y PGY P P Y
Sbjct: 17 PGYGPPQPGYGPPQPGYGPPQPGYGSPQPGYGAPQPGYGAPQPGYGAPQPGYGPPQPGYG 76
Query: 380 PTSPSYSPTSP 412
P P Y P
Sbjct: 77 PPQPGYGAPQP 87
Score = 84.3 bits (207), Expect = 4e-15
Identities = 33/71 (46%), Positives = 33/71 (46%)
Frame = +2
Query: 200 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
PGY P PGY P PGY PGY PGY PGY P Y P PGY P P Y
Sbjct: 24 PGYGPPQPGYGPPQPGYGSPQPGYGAPQPGYGAPQPGYGAPQPGYGPPQPGYGPPQPGYG 83
Query: 380 PTSPSYSPTSP 412
P Y P P
Sbjct: 84 APQPGYGPPQP 94
Score = 82.4 bits (202), Expect = 1e-14
Identities = 32/69 (46%), Positives = 32/69 (46%)
Frame = +2
Query: 206 YSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPT 385
Y P PGY P PGY P PGY P PGY PGY P Y PGY P Y P
Sbjct: 12 YGPPQPGYGPPQPGYGPPQPGYGPPQPGYGSPQPGYGAPQPGYGAPQPGYGAPQPGYGPP 71
Query: 386 SPSYSPTSP 412
P Y P P
Sbjct: 72 QPGYGPPQP 80
Score = 79.3 bits (194), Expect = 1e-13
Identities = 31/66 (46%), Positives = 31/66 (46%)
Frame = +2
Query: 200 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYS 379
PGY P PGY PGY PGY PGY PGY P P Y P PGY P Y
Sbjct: 31 PGYGPPQPGYGSPQPGYGAPQPGYGAPQPGYGAPQPGYGPPQPGYGPPQPGYGAPQPGYG 90
Query: 380 PTSPSY 397
P P Y
Sbjct: 91 PPQPEY 96
Score = 65.1 bits (157), Expect = 2e-09
Identities = 38/118 (32%), Positives = 45/118 (38%), Gaps = 6/118 (5%)
Frame = +2
Query: 77 PYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP---TSSPGYSPSSPGYSPSSPG 247
PY G P Y P P P G + P PGY PGY PG
Sbjct: 9 PYSYGPPQPGYG-PPQPGYGPPQPGYGPPQPGYGSPQPGYGAPQPGYGAPQPGYGAPQPG 67
Query: 248 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYS---PTSPAYSPTSPSYSPTSP 412
Y P PGY P PGY PGY P P Y + G + +PA + + T+P
Sbjct: 68 YGPPQPGYGPPQPGYGAPQPGYGPPQPEYGKPASGNALPYTNTPALPAQTSYFDYTAP 125
[228][TOP]
>UniRef100_Q4D199 Putative uncharacterized protein n=1 Tax=Trypanosoma cruzi
RepID=Q4D199_TRYCR
Length = 320
Score = 83.6 bits (205), Expect = 6e-15
Identities = 42/115 (36%), Positives = 45/115 (39%), Gaps = 3/115 (2%)
Frame = +2
Query: 77 PYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP---TSSPGYSPSSPGYSPSSPG 247
PY G P Y +P P +P G A P + PGY PGY P
Sbjct: 9 PYSYGPPQPGYG-APQPGYGPPQPGYGAPQPGYGAPQPEYGSPQPGYGAPQPGYGAPQPE 67
Query: 248 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
Y PGY PGY PGY P P Y P PGY P Y P P Y P P
Sbjct: 68 YGSPQPGYGAPQPGYGAPQPGYGPPQPEYGPPQPGYGAPQPGYGPPQPGYGPPQP 122
Score = 68.6 bits (166), Expect = 2e-10
Identities = 30/69 (43%), Positives = 31/69 (44%), Gaps = 1/69 (1%)
Frame = +2
Query: 200 PGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY- 376
P Y PGY PGY PGY P P Y P PGY P Y P PGY P P Y
Sbjct: 66 PEYGSPQPGYGAPQPGYGAPQPGYGPPQPEYGPPQPGYGAPQPGYGPPQPGYGPPQPEYG 125
Query: 377 SPTSPSYSP 403
P S + P
Sbjct: 126 KPASGNALP 134
[229][TOP]
>UniRef100_C3XUY7 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3XUY7_BRAFL
Length = 1576
Score = 83.6 bits (205), Expect = 6e-15
Identities = 43/92 (46%), Positives = 44/92 (47%)
Frame = +2
Query: 137 PTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYS 316
P Q SPY GG P Y P P Y P PGY P PGY P PGY P PGY
Sbjct: 1463 PQPSPQPSPYPGGKPDQP-----YPPDQP-YPPPQPGYPPQQPGY-PPQPGYPPQQPGYP 1515
Query: 317 PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P P Y P PGY P P Y P P+Y P P
Sbjct: 1516 PQQPGYPPQQPGY-PPQPGYPPQQPAYPPQQP 1546
Score = 82.4 bits (202), Expect = 1e-14
Identities = 39/84 (46%), Positives = 41/84 (48%)
Frame = +2
Query: 161 PYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 340
PY P PGY P PGY P PGY P PGY P PGY P PGY P P Y P
Sbjct: 1486 PYPPPQPGYPPQQPGYPPQ-PGYPPQQPGYPPQQPGYPPQQPGY-PPQPGYPPQQPAYPP 1543
Query: 341 SSPGYSPTSPAYSPTSPSYSPTSP 412
PGY P P P Y P++P
Sbjct: 1544 QQPGYPPQG---EPAPPPYHPSAP 1564
Score = 71.6 bits (174), Expect = 3e-11
Identities = 33/72 (45%), Positives = 37/72 (51%)
Frame = +2
Query: 188 PTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTS 367
P PGY P PGY P PGY P PGY P P Y P PGY P P+ P Y P++
Sbjct: 1508 PPQQPGYPPQQPGYPPQQPGYPP-QPGYPPQQPAYPPQQPGYPPQG---EPAPPPYHPSA 1563
Query: 368 PAYSPTSPSYSP 403
P P P+Y P
Sbjct: 1564 PP-PPQDPAYPP 1574
[230][TOP]
>UniRef100_Q25655 RNA polymerase largest subunit (Fragment) n=1 Tax=Plasmodium
berghei RepID=Q25655_PLABE
Length = 204
Score = 82.8 bits (203), Expect = 1e-14
Identities = 56/110 (50%), Positives = 66/110 (60%), Gaps = 5/110 (4%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG----YSPSSPGYSPTSP 265
SPSY SP SPT +A + Y +SPTS + G Y+ SP YS TSP
Sbjct: 41 SPSY--SPT---SPTYNANNNAY-----YSPTSPKNQASDDMGGNKKYNIMSPVYSVTSP 90
Query: 266 GYSPTSPGYSPTSP-GYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
YSPTSP YSPTSP +P+SP YSP YS TSP +SPTSP+YS +SP
Sbjct: 91 KYSPTSPKYSPTSPVPNNPSSPQYSP----YSITSPKFSPTSPAYSISSP 136
Score = 76.6 bits (187), Expect = 8e-13
Identities = 49/107 (45%), Positives = 60/107 (56%), Gaps = 14/107 (13%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDA-QFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSP--- 265
SP+Y + N SPT+ Q S +GG SP YS +SP YSP+SP YSPTSP
Sbjct: 48 SPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPKYSPTSPVPN 107
Query: 266 --------GYSPTSPGYSPTSPGYSPTSPTY--SPSSPGYSPTSPAY 376
YS TSP +SPTSP YS +SP Y + + G +P SPAY
Sbjct: 108 NPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKNENMTGKNPLSPAY 154
[231][TOP]
>UniRef100_Q0UCC9 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0UCC9_PHANO
Length = 351
Score = 82.8 bits (203), Expect = 1e-14
Identities = 54/136 (39%), Positives = 71/136 (52%), Gaps = 11/136 (8%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYHEGMMSPSYMLSP-NLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
FG+TP R + P G+ + +P + R SP SP + M +SP YSP
Sbjct: 87 FGVTPVRRYLD--PISPGLRPTTSTYTPASPRYSPATPKIRSPRLT-MLEDGATSPRYSP 143
Query: 215 SSPGYSPSSPGYSP----TSPGYSPTSPG------YSPTSPGYSPTSPTYSPSSPGYSPT 364
+P ++P SP Y+P T+P Y PT+P YSPT P P SPTY+P SP Y P
Sbjct: 144 PTPHFAPRSPSYAPGLPPTTPTYRPTTPTFIDLTYYSPTPPILMPESPTYTPPSPRYYPA 203
Query: 365 SPAYSPTSPSYSPTSP 412
S + SP Y+PTSP
Sbjct: 204 SFEINLLSPGYAPTSP 219
Score = 73.6 bits (179), Expect = 7e-12
Identities = 56/159 (35%), Positives = 76/159 (47%), Gaps = 28/159 (17%)
Frame = +2
Query: 20 YMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRL--SPTNDAQFSPYVGGMA-FSP 190
Y+D + G+ P S + +P + SP L + ++SP A SP
Sbjct: 95 YLDPISPGLRPTTSTYTPASPRYSPATPK-IRSPRLTMLEDGATSPRYSPPTPHFAPRSP 153
Query: 191 TSSPGYSPSSPGYSPSSPG------YSPTSPGYSPTSPGYSPTSPGYSPTS-------PT 331
+ +PG P++P Y P++P YSPT P P SP Y+P SP Y P S P
Sbjct: 154 SYAPGLPPTTPTYRPTTPTFIDLTYYSPTPPILMPESPTYTPPSPRYYPASFEINLLSPG 213
Query: 332 YSPSSPGY-SPTSPAYSP-----------TSPSYSPTSP 412
Y+P+SPG SPT A SP TSP+Y+PTSP
Sbjct: 214 YAPTSPGIRSPTYGAPSPDLEPASSSLSLTSPTYTPTSP 252
Score = 72.8 bits (177), Expect = 1e-11
Identities = 47/110 (42%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTS----SPGYSPSSPGYSPSSPGYSPTSP 265
SP+Y P+ R P A F + ++PTS SP Y SP P+S S TSP
Sbjct: 190 SPTYT-PPSPRYYP---ASFEINLLSPGYAPTSPGIRSPTYGAPSPDLEPASSSLSLTSP 245
Query: 266 GYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT-SPAYSPTSPSYSPTSP 412
Y+PTSP ++PTS Y TSP++ S SP+ Y P SP+YSPTSP
Sbjct: 246 TYTPTSPHFTPTSTPYVRTSPSFYRPSGSRSPSFYRPYGPASPTYSPTSP 295
Score = 60.5 bits (145), Expect = 6e-08
Identities = 45/119 (37%), Positives = 59/119 (49%), Gaps = 20/119 (16%)
Frame = +2
Query: 92 MMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPG 268
++SP Y SP +R SPT A + +SP Y+P+SP ++P+S Y TSP
Sbjct: 209 LLSPGYAPTSPGIR-SPTYGAPSPDLEPASSSLSLTSPTYTPTSPHFTPTSTPYVRTSPS 267
Query: 269 -YSPT---SPG----YSPTSPGYSPTSPTYSPS-----------SPGYSPTSPAYSPTS 388
Y P+ SP Y P SP YSPTSP S SP YSP SP+ P++
Sbjct: 268 FYRPSGSRSPSFYRPYGPASPTYSPTSPVIPTSIGSPPINFTLGSPTYSPPSPSRLPSA 326
[232][TOP]
>UniRef100_P13983 Extensin n=1 Tax=Nicotiana tabacum RepID=EXTN_TOBAC
Length = 620
Score = 82.8 bits (203), Expect = 1e-14
Identities = 57/126 (45%), Positives = 64/126 (50%), Gaps = 22/126 (17%)
Frame = +2
Query: 101 PSYMLSPNLRLSPTNDAQ-----FSPYVGGMAFSPTSSPGYSPSSPGYSPS--SPGYSPT 259
P++ SP L P+ Q +SP A SP SP YSP P YSP SP YSP
Sbjct: 242 PTHQPSPLRHLPPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPPPPSPIYSPP 301
Query: 260 SPGYSPT-----SPGYSPTSPGYSPTSPTYSP---------SSPGYSPTSPAYS-PTSPS 394
P YSP+ +P +SP P YSP PTYSP SSP YSP P YS P PS
Sbjct: 302 PPAYSPSPPPTPTPTFSPPPPAYSPP-PTYSPPPPTYLPLPSSPIYSPPPPVYSPPPPPS 360
Query: 395 YSPTSP 412
YSP P
Sbjct: 361 YSPPPP 366
Score = 79.0 bits (193), Expect = 2e-13
Identities = 54/134 (40%), Positives = 59/134 (44%), Gaps = 22/134 (16%)
Frame = +2
Query: 77 PYHEGMMSPSYMLSPNLRLSPTNDAQ-----FSPYVGGMAFSPTSSPGYSP---SSPGYS 232
P + PSY P L P + FSP SP P YSP + P YS
Sbjct: 351 PVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPPLPAPPTYS 410
Query: 233 PSSPGYSPTSPGYS---PTSPGYSPTSPGYSPTSP-TYSPSSPGYSPTSPAY-------- 376
P P YSP P Y+ P P YSP P YSP P TYSP P YSP PAY
Sbjct: 411 PPPPTYSPPPPTYAQPPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPP 470
Query: 377 --SPTSPSYSPTSP 412
SP P+YSP P
Sbjct: 471 TYSPPPPAYSPPPP 484
Score = 77.8 bits (190), Expect = 3e-13
Identities = 54/142 (38%), Positives = 61/142 (42%), Gaps = 9/142 (6%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQ---FSPYVGGMAF 184
P+Y+ P S P +E P SP L PT +SP A
Sbjct: 366 PTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPPLPAPPTYSPPPPTYSPPPPTYAQ 425
Query: 185 SPTSSPGYSPSSPGYSPSSPG-YSPTSPGYSPTSPGYS---PTSPGYSPTSPTYSPS--S 346
P P YSP P YSP P YSP P YSP P Y+ P P YSP P YSP S
Sbjct: 426 PPPLPPTYSPPPPAYSPPPPPTYSPPPPTYSPPPPAYAQPPPPPPTYSPPPPAYSPPPPS 485
Query: 347 PGYSPTSPAYSPTSPSYSPTSP 412
P YSP P P P++SP P
Sbjct: 486 PIYSPPPPQVQPLPPTFSPPPP 507
Score = 76.6 bits (187), Expect = 8e-13
Identities = 48/110 (43%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFS--PTSSPGYSPSSPGYSPSSPGYSPTSPGY 271
SP+Y P P +SP + S PT +P +SP P YSP P YSP P Y
Sbjct: 279 SPTYSPPPPTYSPPPPSPIYSPPPPAYSPSPPPTPTPTFSPPPPAYSP-PPTYSPPPPTY 337
Query: 272 --SPTSPGYSPTSPGYS-PTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
P+SP YSP P YS P P+YSP P Y P P SP PS+SP P
Sbjct: 338 LPLPSSPIYSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSPPPP 387
Score = 69.7 bits (169), Expect = 1e-10
Identities = 53/153 (34%), Positives = 59/153 (38%), Gaps = 32/153 (20%)
Frame = +2
Query: 50 PGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT--------SSPG 205
P SPI P P+Y SP +PT Y +SP SSP
Sbjct: 292 PPPSPIYSPP------PPAYSPSPPPTPTPTFSPPPPAYSPPPTYSPPPPTYLPLPSSPI 345
Query: 206 YSPSSP--------GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYS-------------PT 322
YSP P YSP P Y P P SP P +SP P Y P
Sbjct: 346 YSPPPPVYSPPPPPSYSPPPPTYLPPPPPSSPPPPSFSPPPPTYEQSPPPPPAYSPPLPA 405
Query: 323 SPTYSPSSPGYSPTSPAYS---PTSPSYSPTSP 412
PTYSP P YSP P Y+ P P+YSP P
Sbjct: 406 PPTYSPPPPTYSPPPPTYAQPPPLPPTYSPPPP 438
Score = 63.9 bits (154), Expect = 5e-09
Identities = 39/117 (33%), Positives = 54/117 (46%), Gaps = 6/117 (5%)
Frame = +2
Query: 80 YHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSP---GYSPSSPGYSPSSPGY 250
Y + +P Y SP ++ PT +V PT SP G+ P P + + P +
Sbjct: 183 YAQPPPTPIYSPSPQVQPPPTYSPPPPTHV-----QPTPSPPSRGHQPQPPTHRHAPPTH 237
Query: 251 SPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT---SPAYSPTSPSYSPTSP 412
P + P+ + P SP P PTYSP P Y+ + SP YSP P+YSP P
Sbjct: 238 RHAPPTHQPSPLRHLPPSPRRQPQPPTYSPPPPAYAQSPQPSPTYSPPPPTYSPPPP 294
[233][TOP]
>UniRef100_O09451 DNA-directed RNA polymerase (Fragment) n=1 Tax=Bonnemaisonia hamifera
RepID=O09451_9FLOR
Length = 1732
Score = 81.6 bits (200), Expect = 2e-14
Identities = 61/157 (38%), Positives = 77/157 (49%), Gaps = 38/157 (24%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTND---AQFSPYVGGMAFSPTSSPGYSPS 217
+P P S P SP+ SP ++ SP Q +P A +S YSPS
Sbjct: 1577 SPAYRPTSPGPSPYAAQSPAQ--SPGVQYSPDKSRVQVQRAPPTAPSAAGGGASRSYSPS 1634
Query: 218 SPGYS------------PSSPGYSPTSPG-YSPTSPG-YSPTSP---GYSPTSPTY---- 334
SP Y+ +SPGYSP+SPG YSP+SP +SP+SP GYSP++P Y
Sbjct: 1635 SPSYNGRGAASPGANYVAASPGYSPSSPGAYSPSSPAAFSPSSPAAGGYSPSTPAYTANA 1694
Query: 335 ---------SPSSP-----GYSPTSPAYSPTSPSYSP 403
SP P G SP+SP YSP+SP YSP
Sbjct: 1695 AANQYSYARSPRYPPSYANGTSPSSPQYSPSSPQYSP 1731
Score = 70.9 bits (172), Expect = 4e-11
Identities = 63/168 (37%), Positives = 77/168 (45%), Gaps = 48/168 (28%)
Frame = +2
Query: 53 GRSPI-SGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGY 229
G SP S +PY SP Y SP SP G A+ SS ++P+SP Y
Sbjct: 1533 GTSPFYSQSPYAS---SPGYAQSPGRMQSPG---------GAGAYGIGSSGTFAPASPAY 1580
Query: 230 SPSSPGYSP-------TSPG------------------------------YSPTSPGYS- 295
P+SPG SP SPG YSP+SP Y+
Sbjct: 1581 RPTSPGPSPYAAQSPAQSPGVQYSPDKSRVQVQRAPPTAPSAAGGGASRSYSPSSPSYNG 1640
Query: 296 --PTSPG--YSPTSPTYSPSSPG-YSPTSP-AYSPTSPS---YSPTSP 412
SPG Y SP YSPSSPG YSP+SP A+SP+SP+ YSP++P
Sbjct: 1641 RGAASPGANYVAASPGYSPSSPGAYSPSSPAAFSPSSPAAGGYSPSTP 1688
Score = 57.8 bits (138), Expect = 4e-07
Identities = 49/145 (33%), Positives = 61/145 (42%), Gaps = 23/145 (15%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMM-SPSYMLSP-NLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSS 220
TPGR G++ SP+ +P R D Q SP G AFSPT P +
Sbjct: 1447 TPGRKKAFDARATPGLLYSPAAWGTPLRPRTEQGLDQQMSPSADGAAFSPT------PMT 1500
Query: 221 PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYS----PSSPGYSP--------- 361
PG + G +P SP P SPG TSP YS SSPGY+
Sbjct: 1501 PGGAGGGGGMGGLTPLQSPGREYTVPLSPGGGGTSPFYSQSPYASSPGYAQSPGRMQSPG 1560
Query: 362 --------TSPAYSPTSPSYSPTSP 412
+S ++P SP+Y PTSP
Sbjct: 1561 GAGAYGIGSSGTFAPASPAYRPTSP 1585
[234][TOP]
>UniRef100_UPI0001792AA2 PREDICTED: hypothetical protein n=1 Tax=Acyrthosiphon pisum
RepID=UPI0001792AA2
Length = 649
Score = 81.3 bits (199), Expect = 3e-14
Identities = 52/123 (42%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Frame = +2
Query: 53 GRSP-ISGTPYHEGMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFS-PTSSPGYSPSSP 223
G SP G+ G SPSY SP+ S + SP GG + S SSP Y SS
Sbjct: 392 GSSPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSH 451
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
Y SSP Y +SP Y +SP Y +SP Y +SP+Y SS Y +SP+Y +SPSY
Sbjct: 452 SYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSSSYGGSSPSYGGSSPSYGG 511
Query: 404 TSP 412
+SP
Sbjct: 512 SSP 514
Score = 77.0 bits (188), Expect = 6e-13
Identities = 49/120 (40%), Positives = 60/120 (50%), Gaps = 1/120 (0%)
Frame = +2
Query: 53 GRSPISGTPYHE-GMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGY 229
G SP G H G SPSY S + + SP GG SS Y SSP Y
Sbjct: 413 GNSPSYGGSSHSYGGSSPSYGGSSH------SYGGSSPSYGG------SSHSYGGSSPSY 460
Query: 230 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
SSP Y +SP Y +SP Y +SP Y +S +Y SSP Y +SP+Y +SPSY +S
Sbjct: 461 GGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSSSYGGSSPSYGGSSPSYGGSSPSYGSSS 520
Score = 75.5 bits (184), Expect = 2e-12
Identities = 45/125 (36%), Positives = 61/125 (48%)
Frame = +2
Query: 38 FGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPS 217
F + G+S +P + SPS+ S + S Y G + +SSP Y S
Sbjct: 339 FASSYGQSSSYSSPPQKYSSSPSFGGG-----SSSYGGSSSSYGGSSSSYGSSSPSYGGS 393
Query: 218 SPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
SP Y SSP Y +SP Y SP Y +S Y +SP+Y SS Y +SP+Y +S SY
Sbjct: 394 SPSYGGSSPSYGGSSPSYGGNSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSY 453
Query: 398 SPTSP 412
+SP
Sbjct: 454 GGSSP 458
Score = 75.1 bits (183), Expect = 2e-12
Identities = 47/121 (38%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Frame = +2
Query: 53 GRSPISGTPYHEGMMSPSY-MLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGY 229
G S G+ G S SY SP+ S + SP GG SSP Y +SP Y
Sbjct: 365 GSSSYGGSSSSYGGSSSSYGSSSPSYGGSSPSYGGSSPSYGG------SSPSYGGNSPSY 418
Query: 230 SPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
SS Y +SP Y +S Y +SP Y +S +Y SSP Y +SP+Y +SPSY +S
Sbjct: 419 GGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSYGGSS 478
Query: 410 P 412
P
Sbjct: 479 P 479
Score = 71.2 bits (173), Expect = 3e-11
Identities = 50/126 (39%), Positives = 60/126 (47%), Gaps = 6/126 (4%)
Frame = +2
Query: 53 GRSPISGTPYHE-GMMSPSYMLSPNLR--LSPTNDAQFSPYVGGMAFSPTSSPGYSPSSP 223
G SP G H G SPSY S + SP+ Y G SSP Y SSP
Sbjct: 427 GSSPSYGGSSHSYGGSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGGSSP 486
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY---SPTSPS 394
Y SS Y +SP Y +SP Y +SP Y +S Y+ +SP YS +S +Y SP PS
Sbjct: 487 SYGGSSSSYGGSSPSYGGSSPSYGGSSPSYG-SSSLYAGNSPSYSGSSSSYGSPSPYKPS 545
Query: 395 YSPTSP 412
Y SP
Sbjct: 546 YGSPSP 551
Score = 68.6 bits (166), Expect = 2e-10
Identities = 40/104 (38%), Positives = 54/104 (51%), Gaps = 2/104 (1%)
Frame = +2
Query: 104 SYMLSPNLRLSPTN--DAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSP 277
SY SP+ P++ DA S Y G + S +S P SSP + S Y +S Y
Sbjct: 321 SYKPSPSAHYKPSSPFDAFASSY--GQSSSYSSPPQKYSSSPSFGGGSSSYGGSSSSYGG 378
Query: 278 TSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTS 409
+S Y +SP Y +SP+Y SSP Y +SP+Y SPSY +S
Sbjct: 379 SSSSYGSSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSPSYGGSS 422
Score = 67.4 bits (163), Expect = 5e-10
Identities = 49/154 (31%), Positives = 69/154 (44%), Gaps = 32/154 (20%)
Frame = +2
Query: 47 TPGRSPISGTPYHEGMMSPSYMLSPNLRLS------PTNDA--------QFSPYVGGMAF 184
+P P + + Y+ S SY SP+ S P++++ Q S Y GG ++
Sbjct: 264 SPSSYPSTSSEYYAAQQSSSYG-SPSKPSSYPSSVYPSDNSYNKFKYLPQSSLYSGGSSY 322
Query: 185 SPTSSPGYSPSSP------------GYS------PSSPGYSPTSPGYSPTSPGYSPTSPG 310
P+ S Y PSSP YS SSP + S Y +S Y +S
Sbjct: 323 KPSPSAHYKPSSPFDAFASSYGQSSSYSSPPQKYSSSPSFGGGSSSYGGSSSSYGGSSSS 382
Query: 311 YSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
Y +SP+Y SSP Y +SP+Y +SPSY SP
Sbjct: 383 YGSSSPSYGGSSPSYGGSSPSYGGSSPSYGGNSP 416
Score = 62.0 bits (149), Expect = 2e-08
Identities = 53/140 (37%), Positives = 63/140 (45%), Gaps = 21/140 (15%)
Frame = +2
Query: 53 GRSPISGTPYHE-GMMSPSYM-LSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG 226
G SP G H G SPSY SP+ S + SP GG SSP Y SS
Sbjct: 441 GSSPSYGGSSHSYGGSSPSYGGSSPSYGGSSPSYGGSSPSYGG------SSPSYGGSSSS 494
Query: 227 YSPSSPGYSPTSPGYSPTSPGYSPTS------PGYSPTSPTY---SPSSPGYSPTSP--- 370
Y SSP Y +SP Y +SP Y +S P YS +S +Y SP P Y SP
Sbjct: 495 YGGSSPSYGGSSPSYGGSSPSYGSSSLYAGNSPSYSGSSSSYGSPSPYKPSYGSPSPYKS 554
Query: 371 ------AYSPTSPSY-SPTS 409
YS + PS+ SP+S
Sbjct: 555 SSSYKAPYSSSGPSFESPSS 574
[235][TOP]
>UniRef100_Q7RJS0 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
RepID=Q7RJS0_PLAYO
Length = 2312
Score = 81.3 bits (199), Expect = 3e-14
Identities = 50/96 (52%), Positives = 58/96 (60%), Gaps = 24/96 (25%)
Frame = +2
Query: 197 SPGYSPSSPGY--------SPSSPG------------YSPTSPGYSPTSPGYSPTSPGYS 316
SP YSP+SP Y SP+SP Y+ SP YS TSP YSPTSP YS
Sbjct: 2149 SPSYSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYS 2208
Query: 317 PTSPT-YSPSSPGYSP---TSPAYSPTSPSYSPTSP 412
P+SP +PSSP YSP TSP +SPTSP+YS +SP
Sbjct: 2209 PSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSP 2244
Score = 79.7 bits (195), Expect = 9e-14
Identities = 54/108 (50%), Positives = 65/108 (60%), Gaps = 8/108 (7%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG----YSPSSPGYSPTSP 265
SPSY SP SPT +A + Y +SPTS + G Y+ SP YS TSP
Sbjct: 2149 SPSY--SPT---SPTYNANNNAY-----YSPTSPKNQASDDMGGNKKYNIMSPVYSVTSP 2198
Query: 266 GYSPTSPGYSPTSP-GYSPTSPTYSP---SSPGYSPTSPAYSPTSPSY 397
YSPTSP YSP+SP +P+SP YSP +SP +SPTSPAYS +SP Y
Sbjct: 2199 KYSPTSPQYSPSSPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 2246
Score = 75.1 bits (183), Expect = 2e-12
Identities = 48/107 (44%), Positives = 60/107 (56%), Gaps = 14/107 (13%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDA-QFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSP--- 265
SP+Y + N SPT+ Q S +GG SP YS +SP YSP+SP YSP+SP
Sbjct: 2156 SPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSSPVPN 2215
Query: 266 --------GYSPTSPGYSPTSPGYSPTSPTY--SPSSPGYSPTSPAY 376
YS TSP +SPTSP YS +SP Y + + G +P SPAY
Sbjct: 2216 NPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKNENMAGKNPLSPAY 2262
[236][TOP]
>UniRef100_Q9FI54 Genomic DNA, chromosome 5, TAC clone:K3K7 n=1 Tax=Arabidopsis
thaliana RepID=Q9FI54_ARATH
Length = 314
Score = 80.5 bits (197), Expect = 5e-14
Identities = 45/100 (45%), Positives = 53/100 (53%), Gaps = 1/100 (1%)
Frame = +2
Query: 107 YMLSPNLRLSPTNDAQFSPY-VGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTS 283
++ SP+ + A + PY GG F G Y SP YSPTSP YSPTS
Sbjct: 71 FLDSPDYEVKNDKHAHYDPYGYGGSRF------GTGSDLSDYILKSPTYSPTSPSYSPTS 124
Query: 284 PGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSP 403
P Y P S SP S +YSP SP +S SP YSPTS +SP
Sbjct: 125 PSYRPNSSSDSPDSHSYSPVSPDHSLVSPQYSPTSTHHSP 164
Score = 65.1 bits (157), Expect = 2e-09
Identities = 36/69 (52%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Frame = +2
Query: 224 GYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTY-------SPSSPGYSPTSPAYSP 382
GY S G Y SP YSPTSP YSPTSP+Y SP S YSP SP +S
Sbjct: 91 GYGGSRFGTGSDLSDYILKSPTYSPTSPSYSPTSPSYRPNSSSDSPDSHSYSPVSPDHSL 150
Query: 383 TSPSYSPTS 409
SP YSPTS
Sbjct: 151 VSPQYSPTS 159
Score = 60.8 bits (146), Expect = 4e-08
Identities = 33/73 (45%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSP-GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
SP Y + ++ P GY + G Y SP YSPTSP+YSP+SP Y P S +
Sbjct: 74 SPDYEVKNDKHAHYDPYGYGGSRFGTGSDLSDYILKSPTYSPTSPSYSPTSPSYRPNSSS 133
Query: 374 YSPTSPSYSPTSP 412
SP S SYSP SP
Sbjct: 134 DSPDSHSYSPVSP 146
[237][TOP]
>UniRef100_B2RD90 cDNA, FLJ96507 n=1 Tax=Homo sapiens RepID=B2RD90_HUMAN
Length = 520
Score = 80.5 bits (197), Expect = 5e-14
Identities = 45/122 (36%), Positives = 55/122 (45%), Gaps = 15/122 (12%)
Frame = +2
Query: 92 MMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSP-GYSPSSPGYSPSSPGYSPTSPG 268
M SP L N+ S + + S G + P G P SPG+ P SP + P SP
Sbjct: 1 MRSPEGYLRGNM--SENEEEEISQQEGSGDYEVEEIPFGLEPQSPGFEPQSPEFEPQSPR 58
Query: 269 YSPTSPGYSPTSPGYSPTSPTYSP--------------SSPGYSPTSPAYSPTSPSYSPT 406
+ P SPG+ SPG P SP ++P SP Y P SP Y P SP Y P
Sbjct: 59 FEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPR 118
Query: 407 SP 412
SP
Sbjct: 119 SP 120
Score = 70.9 bits (172), Expect = 4e-11
Identities = 34/72 (47%), Positives = 38/72 (52%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
F P SPG+ SPG P SP ++P SP SP + SP Y P SP Y P SPGY P
Sbjct: 59 FEP-ESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEP 117
Query: 362 TSPAYSPTSPSY 397
SP Y S Y
Sbjct: 118 RSPGYESESSRY 129
Score = 68.2 bits (165), Expect = 3e-10
Identities = 32/72 (44%), Positives = 36/72 (50%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPG P SP ++P SP SP + SP Y P SPGY P SP Y P SPGY S Y
Sbjct: 70 SPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYESESSRY 129
Query: 377 SPTSPSYSPTSP 412
+ SP
Sbjct: 130 ESQNTELKTQSP 141
Score = 62.4 bits (150), Expect = 2e-08
Identities = 29/71 (40%), Positives = 34/71 (47%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SP ++P SP SP + SP Y P SPGY P SPGY P SP Y S Y +
Sbjct: 77 SPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYESESSRYESQNTEL 136
Query: 377 SPTSPSYSPTS 409
SP + S
Sbjct: 137 KTQSPEFEAQS 147
Score = 59.3 bits (142), Expect = 1e-07
Identities = 29/72 (40%), Positives = 34/72 (47%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
F+P S P SP + SP Y P SPGY P SPGY P SPGY S Y +
Sbjct: 80 FAPRS-PESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYESESSRYESQNTELKT 138
Query: 362 TSPAYSPTSPSY 397
SP + S +
Sbjct: 139 QSPEFEAQSSKF 150
[238][TOP]
>UniRef100_Q9H5H4 Zinc finger protein 768 n=1 Tax=Homo sapiens RepID=ZN768_HUMAN
Length = 540
Score = 80.5 bits (197), Expect = 5e-14
Identities = 45/122 (36%), Positives = 55/122 (45%), Gaps = 15/122 (12%)
Frame = +2
Query: 92 MMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSP-GYSPSSPGYSPSSPGYSPTSPG 268
M SP L N+ S + + S G + P G P SPG+ P SP + P SP
Sbjct: 21 MRSPEGYLRGNM--SENEEEEISQQEGSGDYEVEEIPFGLEPQSPGFEPQSPEFEPQSPR 78
Query: 269 YSPTSPGYSPTSPGYSPTSPTYSP--------------SSPGYSPTSPAYSPTSPSYSPT 406
+ P SPG+ SPG P SP ++P SP Y P SP Y P SP Y P
Sbjct: 79 FEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPR 138
Query: 407 SP 412
SP
Sbjct: 139 SP 140
Score = 70.9 bits (172), Expect = 4e-11
Identities = 34/72 (47%), Positives = 38/72 (52%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
F P SPG+ SPG P SP ++P SP SP + SP Y P SP Y P SPGY P
Sbjct: 79 FEP-ESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEP 137
Query: 362 TSPAYSPTSPSY 397
SP Y S Y
Sbjct: 138 RSPGYESESSRY 149
Score = 68.2 bits (165), Expect = 3e-10
Identities = 32/72 (44%), Positives = 36/72 (50%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPG P SP ++P SP SP + SP Y P SPGY P SP Y P SPGY S Y
Sbjct: 90 SPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYESESSRY 149
Query: 377 SPTSPSYSPTSP 412
+ SP
Sbjct: 150 ESQNTELKTQSP 161
Score = 62.4 bits (150), Expect = 2e-08
Identities = 29/71 (40%), Positives = 34/71 (47%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SP ++P SP SP + SP Y P SPGY P SPGY P SP Y S Y +
Sbjct: 97 SPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYESESSRYESQNTEL 156
Query: 377 SPTSPSYSPTS 409
SP + S
Sbjct: 157 KTQSPEFEAQS 167
Score = 59.3 bits (142), Expect = 1e-07
Identities = 29/72 (40%), Positives = 34/72 (47%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
F+P S P SP + SP Y P SPGY P SPGY P SPGY S Y +
Sbjct: 100 FAPRS-PESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYESESSRYESQNTELKT 158
Query: 362 TSPAYSPTSPSY 397
SP + S +
Sbjct: 159 QSPEFEAQSSKF 170
[239][TOP]
>UniRef100_UPI0000D9F0D9 PREDICTED: similar to zinc finger protein 239 (predicted) n=1
Tax=Macaca mulatta RepID=UPI0000D9F0D9
Length = 650
Score = 80.1 bits (196), Expect = 7e-14
Identities = 34/72 (47%), Positives = 41/72 (56%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPG+ P SP + P SP + P SPG+ SPG P SP ++P SP SP + SP Y
Sbjct: 179 SPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRY 238
Query: 377 SPTSPSYSPTSP 412
P SP Y P SP
Sbjct: 239 EPQSPGYEPRSP 250
Score = 64.7 bits (156), Expect = 3e-09
Identities = 32/77 (41%), Positives = 37/77 (48%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
F P SPG+ SPG P SP ++P SP SP + SP Y P SP Y P SP Y
Sbjct: 196 FEP-ESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPSYES 254
Query: 362 TSPAYSPTSPSYSPTSP 412
S Y +P SP
Sbjct: 255 ESSRYESQNPELKTQSP 271
Score = 60.8 bits (146), Expect = 4e-08
Identities = 29/71 (40%), Positives = 34/71 (47%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPG P SP ++P SP SP + SP Y P SPGY P SP+Y S Y +P
Sbjct: 207 SPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPSYESESSRYESQNPEL 266
Query: 377 SPTSPSYSPTS 409
SP S
Sbjct: 267 KTQSPELEAQS 277
Score = 58.9 bits (141), Expect = 2e-07
Identities = 25/56 (44%), Positives = 31/56 (55%)
Frame = +2
Query: 245 GYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
G P SPG+ P SP + P SP + P SP + SPG P SP ++P SP SP
Sbjct: 174 GLEPQSPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSP 229
Score = 53.5 bits (127), Expect = 7e-06
Identities = 25/67 (37%), Positives = 30/67 (44%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SP ++P SP SP + SP Y P SPGY P SP Y S Y +P SP
Sbjct: 214 SPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPSYESESSRYESQNPELKTQSPEL 273
Query: 377 SPTSPSY 397
S +
Sbjct: 274 EAQSSKF 280
[240][TOP]
>UniRef100_B7Z2Y7 cDNA FLJ59521, moderately similar to Zinc finger and SCAN
domain-containing protein 2 n=1 Tax=Homo sapiens
RepID=B7Z2Y7_HUMAN
Length = 453
Score = 80.1 bits (196), Expect = 7e-14
Identities = 34/72 (47%), Positives = 41/72 (56%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPG+ P SP + P SP + P SPG+ SPG P SP ++P SP SP + SP Y
Sbjct: 31 SPGFEPQSPEFEPQSPRFEPESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRY 90
Query: 377 SPTSPSYSPTSP 412
P SP Y P SP
Sbjct: 91 EPQSPGYEPRSP 102
Score = 78.6 bits (192), Expect = 2e-13
Identities = 40/109 (36%), Positives = 50/109 (45%), Gaps = 15/109 (13%)
Frame = +2
Query: 131 LSPTNDAQFSPYVGGMAFSPTSSP-GYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSP 307
+S + + S G + P G P SPG+ P SP + P SP + P SPG+ SP
Sbjct: 1 MSENEEEEISQQEGSGDYEVEEIPFGLEPQSPGFEPQSPEFEPQSPRFEPESPGFESRSP 60
Query: 308 GYSPTSPTYSP--------------SSPGYSPTSPAYSPTSPSYSPTSP 412
G P SP ++P SP Y P SP Y P SP Y P SP
Sbjct: 61 GLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSP 109
Score = 70.9 bits (172), Expect = 4e-11
Identities = 34/72 (47%), Positives = 38/72 (52%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
F P SPG+ SPG P SP ++P SP SP + SP Y P SP Y P SPGY P
Sbjct: 48 FEP-ESPGFESRSPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEP 106
Query: 362 TSPAYSPTSPSY 397
SP Y S Y
Sbjct: 107 RSPGYESESSRY 118
Score = 68.2 bits (165), Expect = 3e-10
Identities = 32/72 (44%), Positives = 36/72 (50%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPG P SP ++P SP SP + SP Y P SPGY P SP Y P SPGY S Y
Sbjct: 59 SPGLVPPSPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYESESSRY 118
Query: 377 SPTSPSYSPTSP 412
+ SP
Sbjct: 119 ESQNTELKTQSP 130
Score = 62.4 bits (150), Expect = 2e-08
Identities = 29/71 (40%), Positives = 34/71 (47%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SP ++P SP SP + SP Y P SPGY P SPGY P SP Y S Y +
Sbjct: 66 SPEFAPRSPESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYESESSRYESQNTEL 125
Query: 377 SPTSPSYSPTS 409
SP + S
Sbjct: 126 KTQSPEFEAQS 136
Score = 59.3 bits (142), Expect = 1e-07
Identities = 29/72 (40%), Positives = 34/72 (47%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
F+P S P SP + SP Y P SPGY P SPGY P SPGY S Y +
Sbjct: 69 FAPRS-PESDSQSPEFESQSPRYEPQSPGYEPRSPGYEPRSPGYESESSRYESQNTELKT 127
Query: 362 TSPAYSPTSPSY 397
SP + S +
Sbjct: 128 QSPEFEAQSSKF 139
[241][TOP]
>UniRef100_Q1WKU3 Putative RNA polymerase II 215 kD subunit (Fragment) n=1
Tax=Drosophila orena RepID=Q1WKU3_DROOR
Length = 750
Score = 79.7 bits (195), Expect = 9e-14
Identities = 53/136 (38%), Positives = 67/136 (49%), Gaps = 10/136 (7%)
Frame = +2
Query: 29 GLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGY 208
G++ T G S + G G S M P N ++ G ++ P +
Sbjct: 617 GIEIPNTLGSSMLGGAAMFIGGGSTPSMTPPMTPWDNCNTPRYFSPPGHVSAMTPGGPSF 676
Query: 209 SPSSPG-YSPSSPGYSPTSPGYSPTSPG-----YSP----TSPGYSPTSPTYSPSSPGYS 358
SPS+ S SP +SP PG SP+SPG Y P SP YSPTSP Y+ SSPG
Sbjct: 677 SPSAASDASGMSPSWSPAHPGSSPSSPGPSMSPYFPASPSVSPSYSPTSPNYTASSPG-- 734
Query: 359 PTSPAYSPTSPSYSPT 406
SP YSP+SP+YSPT
Sbjct: 735 GASPNYSPSSPNYSPT 750
[242][TOP]
>UniRef100_C6F096 RNA polymerase II (Fragment) n=1 Tax=Plasmodium yoelii nigeriensis
RepID=C6F096_9APIC
Length = 161
Score = 79.7 bits (195), Expect = 9e-14
Identities = 51/105 (48%), Positives = 64/105 (60%), Gaps = 2/105 (1%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDA-QFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y + N SPT+ Q S +GG + Y+ SP YS +SP YSPTSP YS
Sbjct: 5 SPTYNANNNAYYSPTSPKNQASDDMGG-------NKKYNIMSPVYSVTSPKYSPTSPQYS 57
Query: 275 PTSP-GYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPT 406
P+SP +P+SP YSP YS +SP +SPTSPAYS +SP Y T
Sbjct: 58 PSSPVPNNPSSPQYSP----YSITSPKFSPTSPAYSISSPVYDKT 98
Score = 79.0 bits (193), Expect = 2e-13
Identities = 49/98 (50%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG----YSPSSPGYSPTSPGYSPTSPGYSPT 301
SPT +A + Y +SPTS + G Y+ SP YS TSP YSPTSP YSP+
Sbjct: 5 SPTYNANNNAY-----YSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPS 59
Query: 302 SP-GYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP +P+SP YSP YS TSP +SPTSP+YS +SP
Sbjct: 60 SPVPNNPSSPQYSP----YSITSPKFSPTSPAYSISSP 93
Score = 76.3 bits (186), Expect = 1e-12
Identities = 46/86 (53%), Positives = 54/86 (62%), Gaps = 17/86 (19%)
Frame = +2
Query: 206 YSPSSPGYSPSSPGY-SPTSPG------------YSPTSPGYSPTSPGYSPTSPTYSPSS 346
YSP+SP Y+ ++ Y SPTSP Y+ SP YS TSP YSPTSP YSPSS
Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60
Query: 347 P-GYSPTSPAYSP---TSPSYSPTSP 412
P +P+SP YSP TSP +SPTSP
Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSP 86
[243][TOP]
>UniRef100_Q8R0T2 Zinc finger protein 768 n=1 Tax=Mus musculus RepID=ZN768_MOUSE
Length = 568
Score = 79.7 bits (195), Expect = 9e-14
Identities = 35/74 (47%), Positives = 42/74 (56%)
Frame = +2
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
+ SP + P SPG+ SPG+ P SP ++P SP P SP + SP Y P SPG P SP
Sbjct: 77 SQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSPKYEPRSPGCHPRSP 136
Query: 371 AYSPTSPSYSPTSP 412
P SP Y P SP
Sbjct: 137 GCEPGSPRYEPKSP 150
Score = 77.4 bits (189), Expect = 5e-13
Identities = 37/77 (48%), Positives = 42/77 (54%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
F P SPG+ SPG+ P SP ++P SP P SP + SP Y P SP P SPG P
Sbjct: 82 FEP-ESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSPKYEPRSPGCHPRSPGCEP 140
Query: 362 TSPAYSPTSPSYSPTSP 412
SP Y P SP Y SP
Sbjct: 141 GSPRYEPKSPGYGSKSP 157
Score = 77.4 bits (189), Expect = 5e-13
Identities = 35/72 (48%), Positives = 39/72 (54%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SP ++P SP P SP + SP Y P SPG P SPG P SP Y P SPGY SP +
Sbjct: 100 SPEFAPRSPESDPQSPEFESQSPKYEPRSPGCHPRSPGCEPGSPRYEPKSPGYGSKSPEF 159
Query: 377 SPTSPSYSPTSP 412
SP Y SP
Sbjct: 160 ESQSPGYESQSP 171
Score = 75.1 bits (183), Expect = 2e-12
Identities = 34/72 (47%), Positives = 39/72 (54%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPG+ P SP ++P SP P SP + SP Y P SPG P SP P SP Y P SP Y
Sbjct: 93 SPGFVPPSPEFAPRSPESDPQSPEFESQSPKYEPRSPGCHPRSPGCEPGSPRYEPKSPGY 152
Query: 377 SPTSPSYSPTSP 412
SP + SP
Sbjct: 153 GSKSPEFESQSP 164
Score = 74.7 bits (182), Expect = 3e-12
Identities = 32/72 (44%), Positives = 40/72 (55%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SP + P SP + SP + P SPG+ SPG+ P SP ++P SP P SP + SP Y
Sbjct: 65 SPEFEPQSPEFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSPKY 124
Query: 377 SPTSPSYSPTSP 412
P SP P SP
Sbjct: 125 EPRSPGCHPRSP 136
Score = 73.9 bits (180), Expect = 5e-12
Identities = 31/70 (44%), Positives = 39/70 (55%)
Frame = +2
Query: 203 GYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSP 382
G P SP + P SP + SP + P SPG+ SPG+ P SP ++P SP P SP +
Sbjct: 60 GLEPQSPEFEPQSPEFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFES 119
Query: 383 TSPSYSPTSP 412
SP Y P SP
Sbjct: 120 QSPKYEPRSP 129
Score = 73.2 bits (178), Expect = 9e-12
Identities = 34/77 (44%), Positives = 41/77 (53%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
F P SP + SP + P SPG+ SPG+ P SP ++P SP P SP + SP Y P
Sbjct: 68 FEP-QSPEFESQSPRFEPESPGFESRSPGFVPPSPEFAPRSPESDPQSPEFESQSPKYEP 126
Query: 362 TSPAYSPTSPSYSPTSP 412
SP P SP P SP
Sbjct: 127 RSPGCHPRSPGCEPGSP 143
Score = 73.2 bits (178), Expect = 9e-12
Identities = 33/66 (50%), Positives = 35/66 (53%)
Frame = +2
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
S SP + SP Y P SPG P SPG P SP Y P SPGY SP + SPGY
Sbjct: 110 SDPQSPEFESQSPKYEPRSPGCHPRSPGCEPGSPRYEPKSPGYGSKSPEFESQSPGYESQ 169
Query: 365 SPAYSP 382
SP Y P
Sbjct: 170 SPGYEP 175
Score = 72.4 bits (176), Expect = 1e-11
Identities = 35/74 (47%), Positives = 38/74 (51%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
F+P S P P SP + SP Y P SPG P SPG P SP Y P SP Y SP +
Sbjct: 103 FAPRS-PESDPQSPEFESQSPKYEPRSPGCHPRSPGCEPGSPRYEPKSPGYGSKSPEFES 161
Query: 362 TSPAYSPTSPSYSP 403
SP Y SP Y P
Sbjct: 162 QSPGYESQSPGYEP 175
Score = 71.6 bits (174), Expect = 3e-11
Identities = 40/108 (37%), Positives = 49/108 (45%)
Frame = +2
Query: 89 GMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPG 268
G + PS +P SP +D Q + + SP Y P SPG P SPG P SP
Sbjct: 95 GFVPPSPEFAPR---SPESDPQSPEF-------ESQSPKYEPRSPGCHPRSPGCEPGSPR 144
Query: 269 YSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
Y P SPGY SP + SP Y SPGY P + + + SP
Sbjct: 145 YEPKSPGYGSKSPEFESQSPGYESQSPGYEPQNSGDGVQNSEFKTHSP 192
[244][TOP]
>UniRef100_UPI00005878B7 PREDICTED: hypothetical protein n=1 Tax=Strongylocentrotus
purpuratus RepID=UPI00005878B7
Length = 374
Score = 79.3 bits (194), Expect = 1e-13
Identities = 42/133 (31%), Positives = 71/133 (53%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
PSY + T S + TPY+ P Y S +P+ A Y PT
Sbjct: 34 PSYPTSTPYYTTSTPSYPTSTPYYT-TSRPPYTTS-----TPSYTASTPSYTESRPSYPT 87
Query: 194 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
S+P Y+ S+P Y+ ++ Y+ ++P Y+ + P Y+ + P Y+ ++P+Y S+P Y T+P
Sbjct: 88 STPYYTTSTPYYTLTTSSYTASTPSYTESRPSYATSRPSYTTSTPSYPTSTPYYRTTTPY 147
Query: 374 YSPTSPSYSPTSP 412
Y+ T+PSY+ ++P
Sbjct: 148 YTSTTPSYTASTP 160
Score = 72.8 bits (177), Expect = 1e-11
Identities = 30/84 (35%), Positives = 54/84 (64%)
Frame = +2
Query: 161 PYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSP 340
PY PTS+P Y+ S+P Y S+P Y+ + P Y+ ++P Y+ ++P Y+ + P+Y
Sbjct: 28 PYTTSTPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYTESRPSYPT 87
Query: 341 SSPGYSPTSPAYSPTSPSYSPTSP 412
S+P Y+ ++P Y+ T+ SY+ ++P
Sbjct: 88 STPYYTTSTPYYTLTTSSYTASTP 111
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/115 (31%), Positives = 64/115 (55%)
Frame = +2
Query: 68 SGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPG 247
+ TPY+ +P Y L+ + + T Y TS P Y+ S+P Y S+P
Sbjct: 87 TSTPYYT-TSTPYYTLTTSSYTASTPS-----YTESRPSYATSRPSYTTSTPSYPTSTPY 140
Query: 248 YSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
Y T+P Y+ T+P Y+ ++P Y+ ++P+Y+ S P Y+ + P ++ T+ SY+ ++P
Sbjct: 141 YRTTTPYYTSTTPSYTASTPSYATSTPSYATSRPSYATSRPYFTSTTSSYTASTP 195
Score = 69.7 bits (169), Expect = 1e-10
Identities = 37/132 (28%), Positives = 70/132 (53%)
Frame = +2
Query: 14 PSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT 193
PSY + T + TPY+ + + SY S +P+ Y T
Sbjct: 76 PSYTESRPSYPTSTPYYTTSTPYYT-LTTSSYTAS-----TPSYTESRPSYATSRPSYTT 129
Query: 194 SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPA 373
S+P Y S+P Y ++P Y+ T+P Y+ ++P Y+ ++P Y+ + P+Y+ S P ++ T+ +
Sbjct: 130 STPSYPTSTPYYRTTTPYYTSTTPSYTASTPSYATSTPSYATSRPSYATSRPYFTSTTSS 189
Query: 374 YSPTSPSYSPTS 409
Y+ ++PSY+ ++
Sbjct: 190 YTASTPSYTEST 201
Score = 67.8 bits (164), Expect = 4e-10
Identities = 26/74 (35%), Positives = 50/74 (67%)
Frame = +2
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
TS P Y+ S+P Y S+P Y+ ++P Y ++P Y+ + P Y+ ++P+Y+ S+P Y+ + P
Sbjct: 24 TSRPPYTTSTPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTPSYTESRP 83
Query: 371 AYSPTSPSYSPTSP 412
+Y ++P Y+ ++P
Sbjct: 84 SYPTSTPYYTTSTP 97
Score = 67.0 bits (162), Expect = 6e-10
Identities = 26/74 (35%), Positives = 49/74 (66%)
Frame = +2
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP 370
T+ P Y+ S P Y+ S+P Y ++P Y+ ++P Y ++P Y+ + P Y+ S+P Y+ ++P
Sbjct: 17 TTPPYYTTSRPPYTTSTPSYPTSTPYYTTSTPSYPTSTPYYTTSRPPYTTSTPSYTASTP 76
Query: 371 AYSPTSPSYSPTSP 412
+Y+ + PSY ++P
Sbjct: 77 SYTESRPSYPTSTP 90
Score = 63.2 bits (152), Expect = 9e-09
Identities = 29/83 (34%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Frame = +2
Query: 176 MAFSPTSSPGYSPSS----PGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPS 343
MA T+S YS S P Y+ S P Y+ ++P Y ++P Y+ ++P Y ++P Y+ S
Sbjct: 1 MATLTTTSQSYSTSETTTPPYYTTSRPPYTTSTPSYPTSTPYYTTSTPSYPTSTPYYTTS 60
Query: 344 SPGYSPTSPAYSPTSPSYSPTSP 412
P Y+ ++P+Y+ ++PSY+ + P
Sbjct: 61 RPPYTTSTPSYTASTPSYTESRP 83
Score = 60.1 bits (144), Expect = 8e-08
Identities = 32/104 (30%), Positives = 59/104 (56%), Gaps = 3/104 (2%)
Frame = +2
Query: 101 PSYMLS-PNLRLSPTNDAQFSPYVGGMA-FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
PSY S P+ S + +PY + +++P Y+ S+P Y+ S+P Y+ + P Y+
Sbjct: 118 PSYATSRPSYTTSTPSYPTSTPYYRTTTPYYTSTTPSYTASTPSYATSTPSYATSRPSYA 177
Query: 275 PTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSP-AYSPTSPSYSP 403
+ P ++ T+ Y+ ++P+Y+ S+ Y+ T P A PT+ + SP
Sbjct: 178 TSRPYFTSTTSSYTASTPSYTESTASYTTTQPSAAPPTTMTSSP 221
[245][TOP]
>UniRef100_UPI0001796FA8 PREDICTED: zinc finger protein 768 n=1 Tax=Equus caballus
RepID=UPI0001796FA8
Length = 547
Score = 79.0 bits (193), Expect = 2e-13
Identities = 35/79 (44%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Frame = +2
Query: 197 SPGYSPSSPGYSP-------SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGY 355
SPG+ P SP ++P SP + P SP Y P SPGY P SPGY S Y SPGY
Sbjct: 90 SPGFVPPSPEFAPRSSESDSQSPEFEPQSPRYEPQSPGYEPKSPGYESQSSRYESKSPGY 149
Query: 356 SPTSPAYSPTSPSYSPTSP 412
P +P + P +P + SP
Sbjct: 150 EPQNPVFEPQNPEFKTQSP 168
Score = 77.0 bits (188), Expect = 6e-13
Identities = 32/72 (44%), Positives = 41/72 (56%)
Frame = +2
Query: 197 SPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPTSPAY 376
SPG+ P +P + SP + P SPG+ SPG+ P SP ++P S SP + P SP Y
Sbjct: 62 SPGFEPQNPEFESQSPRFEPESPGFESHSPGFVPPSPEFAPRSSESDSQSPEFEPQSPRY 121
Query: 377 SPTSPSYSPTSP 412
P SP Y P SP
Sbjct: 122 EPQSPGYEPKSP 133
Score = 76.6 bits (187), Expect = 8e-13
Identities = 35/81 (43%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Frame = +2
Query: 191 TSSPGYSPSSPGYSPSSPGYSPTSPGYSPTS-------PGYSPTSPGYSPTSPTYSPSSP 349
+ SP + P SPG+ SPG+ P SP ++P S P + P SP Y P SP Y P SP
Sbjct: 74 SQSPRFEPESPGFESHSPGFVPPSPEFAPRSSESDSQSPEFEPQSPRYEPQSPGYEPKSP 133
Query: 350 GYSPTSPAYSPTSPSYSPTSP 412
GY S Y SP Y P +P
Sbjct: 134 GYESQSSRYESKSPGYEPQNP 154
Score = 72.0 bits (175), Expect = 2e-11
Identities = 30/71 (42%), Positives = 38/71 (53%)
Frame = +2
Query: 185 SPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT 364
S + SP + P SP Y P SPGY P SPGY S Y SPGY P +P + P +P +
Sbjct: 107 SDSQSPEFEPQSPRYEPQSPGYEPKSPGYESQSSRYESKSPGYEPQNPVFEPQNPEFKTQ 166
Query: 365 SPAYSPTSPSY 397
SP + S +
Sbjct: 167 SPEFEAQSSRF 177
Score = 69.7 bits (169), Expect = 1e-10
Identities = 33/76 (43%), Positives = 40/76 (52%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSP 361
F+P SS S SP + P SP Y P SPGY P SPGY S Y SP Y P +P + P
Sbjct: 100 FAPRSSESDS-QSPEFEPQSPRYEPQSPGYEPKSPGYESQSSRYESKSPGYEPQNPVFEP 158
Query: 362 TSPAYSPTSPSYSPTS 409
+P + SP + S
Sbjct: 159 QNPEFKTQSPEFEAQS 174
[246][TOP]
>UniRef100_C6F093 RNA polymerase II (Fragment) n=2 Tax=Plasmodium yoelii
RepID=C6F093_PLAYO
Length = 161
Score = 79.0 bits (193), Expect = 2e-13
Identities = 49/98 (50%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG----YSPSSPGYSPTSPGYSPTSPGYSPT 301
SPT +A + Y +SPTS + G Y+ SP YS TSP YSPTSP YSP+
Sbjct: 5 SPTYNANNNAY-----YSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPS 59
Query: 302 SP-GYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP +P+SP YSP YS TSP +SPTSP+YS +SP
Sbjct: 60 SPVPNNPSSPQYSP----YSITSPKFSPTSPAYSISSP 93
Score = 78.2 bits (191), Expect = 3e-13
Identities = 50/102 (49%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDA-QFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y + N SPT+ Q S +GG + Y+ SP YS +SP YSPTSP YS
Sbjct: 5 SPTYNANNNAYYSPTSPKNQASDDMGG-------NKKYNIMSPVYSVTSPKYSPTSPQYS 57
Query: 275 PTSP-GYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
P+SP +P+SP YSP YS +SP +SPTSPAYS +SP Y
Sbjct: 58 PSSPVPNNPSSPQYSP----YSITSPKFSPTSPAYSISSPVY 95
Score = 76.3 bits (186), Expect = 1e-12
Identities = 46/86 (53%), Positives = 54/86 (62%), Gaps = 17/86 (19%)
Frame = +2
Query: 206 YSPSSPGYSPSSPGY-SPTSPG------------YSPTSPGYSPTSPGYSPTSPTYSPSS 346
YSP+SP Y+ ++ Y SPTSP Y+ SP YS TSP YSPTSP YSPSS
Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60
Query: 347 P-GYSPTSPAYSP---TSPSYSPTSP 412
P +P+SP YSP TSP +SPTSP
Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSP 86
[247][TOP]
>UniRef100_C6F091 RNA polymerase II (Fragment) n=1 Tax=Plasmodium berghei
RepID=C6F091_PLABE
Length = 161
Score = 79.0 bits (193), Expect = 2e-13
Identities = 49/98 (50%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG----YSPSSPGYSPTSPGYSPTSPGYSPT 301
SPT +A + Y +SPTS + G Y+ SP YS TSP YSPTSP YSP+
Sbjct: 5 SPTYNANNNAY-----YSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPS 59
Query: 302 SP-GYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SP +P+SP YSP YS TSP +SPTSP+YS +SP
Sbjct: 60 SPVPNNPSSPQYSP----YSITSPKFSPTSPAYSISSP 93
Score = 78.2 bits (191), Expect = 3e-13
Identities = 50/102 (49%), Positives = 63/102 (61%), Gaps = 2/102 (1%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDA-QFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGYS 274
SP+Y + N SPT+ Q S +GG + Y+ SP YS +SP YSPTSP YS
Sbjct: 5 SPTYNANNNAYYSPTSPKNQASDDMGG-------NKKYNIMSPVYSVTSPKYSPTSPQYS 57
Query: 275 PTSP-GYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSY 397
P+SP +P+SP YSP YS +SP +SPTSPAYS +SP Y
Sbjct: 58 PSSPVPNNPSSPQYSP----YSITSPKFSPTSPAYSISSPVY 95
Score = 76.3 bits (186), Expect = 1e-12
Identities = 46/86 (53%), Positives = 54/86 (62%), Gaps = 17/86 (19%)
Frame = +2
Query: 206 YSPSSPGYSPSSPGY-SPTSPG------------YSPTSPGYSPTSPGYSPTSPTYSPSS 346
YSP+SP Y+ ++ Y SPTSP Y+ SP YS TSP YSPTSP YSPSS
Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQASDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60
Query: 347 P-GYSPTSPAYSP---TSPSYSPTSP 412
P +P+SP YSP TSP +SPTSP
Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSP 86
[248][TOP]
>UniRef100_C6ZIW1 RNA polymerase II (Fragment) n=1 Tax=Plasmodium ovale
RepID=C6ZIW1_9APIC
Length = 168
Score = 78.6 bits (192), Expect = 2e-13
Identities = 50/111 (45%), Positives = 63/111 (56%), Gaps = 6/111 (5%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDAQFSPYV--GGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSPGY 271
SP+Y S + + N A +SP + ++ Y+ SP YS +SP YSPTSP Y
Sbjct: 5 SPTYNASHANQANQANTAYYSPTSPKNHITGDVHTNMKYNVMSPVYSVTSPKYSPTSPQY 64
Query: 272 SPTSP----GYSPTSPGYSPTSPTYSPSSPGYSPTSPAYSPTSPSYSPTSP 412
SPTSP SP SP YSP YS +SP +SPTSPAYS +SP Y +P
Sbjct: 65 SPTSPVPNNPSSPHSPHYSP----YSITSPKFSPTSPAYSISSPVYDKNAP 111
[249][TOP]
>UniRef100_C6F098 RNA polymerase II (Fragment) n=2 Tax=Plasmodium vinckei
RepID=C6F098_PLAVN
Length = 161
Score = 78.6 bits (192), Expect = 2e-13
Identities = 47/93 (50%), Positives = 58/93 (62%), Gaps = 16/93 (17%)
Frame = +2
Query: 182 FSPTSSPGYSPSSPGYSPSSPG------------YSPTSPGYSPTSPGYSPTSPGYSPTS 325
+SPTS + ++ YSP+SP Y+ SP YS TSP YSPTSP YSP+S
Sbjct: 1 YSPTSPTYNANNNAYYSPTSPKNQAGDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSS 60
Query: 326 PT-YSPSSPGYSP---TSPAYSPTSPSYSPTSP 412
P +PSSP YSP TSP +SPTSP+YS +SP
Sbjct: 61 PVPNNPSSPQYSPYSITSPKFSPTSPAYSISSP 93
Score = 77.0 bits (188), Expect = 6e-13
Identities = 48/96 (50%), Positives = 59/96 (61%), Gaps = 8/96 (8%)
Frame = +2
Query: 134 SPTNDAQFSPYVGGMAFSPTSSPGYSPSSPG----YSPSSPGYSPTSPGYSPTSPGYSPT 301
SPT +A + Y +SPTS + G Y+ SP YS TSP YSPTSP YSP+
Sbjct: 5 SPTYNANNNAY-----YSPTSPKNQAGDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPS 59
Query: 302 SP-GYSPTSPTYSP---SSPGYSPTSPAYSPTSPSY 397
SP +P+SP YSP +SP +SPTSPAYS +SP Y
Sbjct: 60 SPVPNNPSSPQYSPYSITSPKFSPTSPAYSISSPVY 95
Score = 74.7 bits (182), Expect = 3e-12
Identities = 48/107 (44%), Positives = 59/107 (55%), Gaps = 14/107 (13%)
Frame = +2
Query: 98 SPSYMLSPNLRLSPTNDA-QFSPYVGGMAFSPTSSPGYSPSSPGYSPSSPGYSPTSP--- 265
SP+Y + N SPT+ Q +GG SP YS +SP YSP+SP YSP+SP
Sbjct: 5 SPTYNANNNAYYSPTSPKNQAGDDMGGNKKYNIMSPVYSVTSPKYSPTSPQYSPSSPVPN 64
Query: 266 --------GYSPTSPGYSPTSPGYSPTSPTY--SPSSPGYSPTSPAY 376
YS TSP +SPTSP YS +SP Y S + G +P SPAY
Sbjct: 65 NPSSPQYSPYSITSPKFSPTSPAYSISSPVYDKSENMAGKNPLSPAY 111
[250][TOP]
>UniRef100_A9U3I4 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9U3I4_PHYPA
Length = 291
Score = 77.8 bits (190), Expect = 3e-13
Identities = 73/178 (41%), Positives = 78/178 (43%), Gaps = 45/178 (25%)
Frame = +2
Query: 14 PSYMDGLDFG---MTPGRS----PISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYV- 169
P Y G G +TP S P S TP +PS SP P + A SP
Sbjct: 88 PPYSPGTPSGGSPVTPSPSYSSPPYSPTPSSSSPTTPS---SPTYSSPPYSPAPSSPSPT 144
Query: 170 ---GGMAFSPT-SSPGYSPSSPGYSPSSPGYSPTSPGYSPTSPGYSPT--------SPGY 313
G SPT SSP YSP+ G SPSSP YS SP YSPT SPT SP Y
Sbjct: 145 APSGPSPSSPTYSSPPYSPTPSGSSPSSPTYS--SPPYSPTPSSSSPTTPSSPSYSSPPY 202
Query: 314 SPT----------SPTYSPSSPGYSPT---------------SPAYSPTSPSYSPTSP 412
SPT SPTYS SP YSPT SP YSPT SPT+P
Sbjct: 203 SPTPSDPSPSTPSSPTYS--SPPYSPTPSGPSPPTPSSPTYSSPPYSPTPSGSSPTTP 258
Score = 74.3 bits (181), Expect = 4e-12
Identities = 59/137 (43%), Positives = 68/137 (49%), Gaps = 21/137 (15%)
Frame = +2
Query: 59 SPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPT--SSPGYSPSSPGYS 232
SP P SP+Y SP +P+ + SP +SPT SS +PSSP YS
Sbjct: 140 SPSPTAPSGPSPSSPTYS-SPPYSPTPSGSSPSSPTYSSPPYSPTPSSSSPTTPSSPSYS 198
Query: 233 PSSPGYSPTSPGYSPT--------SPGYSPTSPGYSP---TSPTYSPSSPGYSPTSPAYS 379
SP YSPT SP+ SP YSPT G SP +SPTYS SP YSPT S
Sbjct: 199 --SPPYSPTPSDPSPSTPSSPTYSSPPYSPTPSGPSPPTPSSPTYS--SPPYSPTPSGSS 254
Query: 380 PTSPS--------YSPT 406
PT+PS YSPT
Sbjct: 255 PTTPSSPSYSSPPYSPT 271
Score = 73.6 bits (179), Expect = 7e-12
Identities = 60/152 (39%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Frame = +2
Query: 11 LPSYMDGLDFGMTPGRSPISGTPYHEGMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSP 190
L S + L P + TPY +PSY SP + P+ +P +SP
Sbjct: 41 LGSLIPSLTLCPPPPSTDPPATPY-----TPSY--SPPVASDPSPVTP-TPVYSSPPYSP 92
Query: 191 TSSPGYSPSSPGYSPSSPGYSPT---------------SPGYSPTSPGYSPTSP-GYSPT 322
+ G SP +P S SSP YSPT SP YSP SPT+P G SP+
Sbjct: 93 GTPSGGSPVTPSPSYSSPPYSPTPSSSSPTTPSSPTYSSPPYSPAPSSPSPTAPSGPSPS 152
Query: 323 SPTYSPSSPGYSPTSPAYSPTSPSYS--PTSP 412
SPTY SSP YSPT SP+SP+YS P SP
Sbjct: 153 SPTY--SSPPYSPTPSGSSPSSPTYSSPPYSP 182
Score = 70.9 bits (172), Expect = 4e-11
Identities = 60/132 (45%), Positives = 67/132 (50%), Gaps = 18/132 (13%)
Frame = +2
Query: 62 PISGTPYHEGMMSPSYMLSPNLRLSPTNDAQF-----SPYVGGMAFSPT-SSPGYS-PSS 220
P S TP SP+Y P SPT + SP +SPT S P S PSS
Sbjct: 160 PYSPTPSGSSPSSPTYSSPP---YSPTPSSSSPTTPSSPSYSSPPYSPTPSDPSPSTPSS 216
Query: 221 PGYSPSSPGYSPTSPGYSP--------TSPGYSPTSPGYSPTSPTY-SPSSPGYSPTSPA 373
P YS SP YSPT G SP +SP YSPT G SPT+P+ S SSP YSPT
Sbjct: 217 PTYS--SPPYSPTPSGPSPPTPSSPTYSSPPYSPTPSGSSPTTPSSPSYSSPPYSPTPSG 274
Query: 374 YSPT--SPSYSP 403
SP+ SPS SP
Sbjct: 275 GSPSGGSPSGSP 286
Score = 63.9 bits (154), Expect = 5e-09
Identities = 49/131 (37%), Positives = 61/131 (46%), Gaps = 12/131 (9%)
Frame = +2
Query: 41 GMTPGRSPISGTPYHE--GMMSPSYMLSPNLRLSPTNDAQFSPYVGGMAFSPTSSPGYSP 214
G +P S PY SP+ SP+ P + P + SSP YSP
Sbjct: 167 GSSPSSPTYSSPPYSPTPSSSSPTTPSSPSYSSPPYSPTPSDPSPSTPSSPTYSSPPYSP 226
Query: 215 SSPGYSP--------SSPGYSPTSPGYSPTSPGYSPTSPGYSPTSPTYSPSSPGYSPT-- 364
+ G SP SSP YSPT G SPT +P+SP YS SP YSP+ G SP+
Sbjct: 227 TPSGPSPPTPSSPTYSSPPYSPTPSGSSPT----TPSSPSYS--SPPYSPTPSGGSPSGG 280
Query: 365 SPAYSPTSPSY 397
SP+ SP + Y
Sbjct: 281 SPSGSPPAGGY 291