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[1][TOP]
>UniRef100_A7Q9K4 Chromosome chr5 scaffold_67, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7Q9K4_VITVI
Length = 390
Score = 197 bits (502), Expect = 2e-49
Identities = 92/120 (76%), Positives = 109/120 (90%)
Frame = +1
Query: 1 RKLSDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTI 180
R+ +DWKAA+A+ ESG +Y GR+EGFNGGGLLVRFYS++GFLP+PQLSP HSCKEP KTI
Sbjct: 90 RRSADWKAARAHLESGFIYEGRIEGFNGGGLLVRFYSLVGFLPFPQLSPSHSCKEPHKTI 149
Query: 181 QEIAKGLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
QEIAKGL+GS++ VKVILAD++K KLIFSEKEAA+ KFSKQ+ +GDIFEA VGSVEDYGA
Sbjct: 150 QEIAKGLIGSLISVKVILADEEKRKLIFSEKEAAWLKFSKQINIGDIFEAMVGSVEDYGA 209
[2][TOP]
>UniRef100_A5BZI0 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5BZI0_VITVI
Length = 418
Score = 197 bits (502), Expect = 2e-49
Identities = 92/120 (76%), Positives = 109/120 (90%)
Frame = +1
Query: 1 RKLSDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTI 180
R+ +DWKAA+A+ ESG +Y GR+EGFNGGGLLVRFYS++GFLP+PQLSP HSCKEP KTI
Sbjct: 90 RRSADWKAARAHLESGFIYEGRIEGFNGGGLLVRFYSLVGFLPFPQLSPSHSCKEPHKTI 149
Query: 181 QEIAKGLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
QEIAKGL+GS++ VKVILAD++K KLIFSEKEAA+ KFSKQ+ +GDIFEA VGSVEDYGA
Sbjct: 150 QEIAKGLIGSLISVKVILADEEKRKLIFSEKEAAWLKFSKQINIGDIFEAMVGSVEDYGA 209
[3][TOP]
>UniRef100_B9RY10 Putative uncharacterized protein n=1 Tax=Ricinus communis
RepID=B9RY10_RICCO
Length = 365
Score = 177 bits (449), Expect = 3e-43
Identities = 81/120 (67%), Positives = 104/120 (86%)
Frame = +1
Query: 1 RKLSDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTI 180
R+ +DWKAA+AY++SG ++ GR+EGFNGGGLLVRFYS++GFLP+PQLSP HSCKEP+ +I
Sbjct: 82 RRSADWKAARAYRDSGSIFEGRIEGFNGGGLLVRFYSLVGFLPFPQLSPSHSCKEPQISI 141
Query: 181 QEIAKGLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
EIA+GL GS + VKV+ A+++ KLIFSEKEA +SKFSK++KVGDIF +VGS EDYGA
Sbjct: 142 HEIARGLNGSSISVKVLQAEEESRKLIFSEKEAEWSKFSKRIKVGDIFVGRVGSTEDYGA 201
[4][TOP]
>UniRef100_B9IAB2 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9IAB2_POPTR
Length = 299
Score = 167 bits (422), Expect = 4e-40
Identities = 78/117 (66%), Positives = 96/117 (82%)
Frame = +1
Query: 10 SDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEI 189
+DWKA KAY + G + GRVEGFNGGGL+VRFYS++GFLP+P LSP HSCK+P+KTI EI
Sbjct: 1 ADWKAVKAYYDGGHILQGRVEGFNGGGLIVRFYSLVGFLPFPLLSPSHSCKDPQKTIHEI 60
Query: 190 AKGLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
AK L G ++ VKVI A+++ KLIFSEKEA +SKFSK + VG+IF +VGSVEDYGA
Sbjct: 61 AKDLTGLLISVKVIHAEEENRKLIFSEKEAVWSKFSKGINVGEIFAGRVGSVEDYGA 117
[5][TOP]
>UniRef100_Q9LK47 Similarity to 30s ribosomal protein s1 n=1 Tax=Arabidopsis thaliana
RepID=Q9LK47_ARATH
Length = 392
Score = 164 bits (416), Expect = 2e-39
Identities = 77/117 (65%), Positives = 95/117 (81%)
Frame = +1
Query: 10 SDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEI 189
SDWK AKAY +SG + G V+GFNGGGLL+RF+S++GFLPYPQLSP SCKEP+K+I EI
Sbjct: 95 SDWKTAKAYCKSGDTFEGEVQGFNGGGLLIRFHSLVGFLPYPQLSPSRSCKEPQKSIHEI 154
Query: 190 AKGLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
AK LVGS +PVKV+ AD++ KLI SEK A + K+S+ V VGD+F +VGSVEDYGA
Sbjct: 155 AKTLVGSKLPVKVVQADEENRKLILSEKLALWPKYSQNVNVGDVFNGRVGSVEDYGA 211
[6][TOP]
>UniRef100_C6TC12 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TC12_SOYBN
Length = 115
Score = 133 bits (334), Expect = 7e-30
Identities = 63/82 (76%), Positives = 75/82 (91%)
Frame = +1
Query: 115 LGFLPYPQLSPMHSCKEPEKTIQEIAKGLVGSVMPVKVILADDDKTKLIFSEKEAAYSKF 294
+GFLP+PQLSP+H+ KEPEK+IQEIA+GL+GS+M VKVILAD+D KLIFSEKEAA+SK+
Sbjct: 1 MGFLPFPQLSPVHASKEPEKSIQEIAQGLIGSIMSVKVILADEDNKKLIFSEKEAAWSKY 60
Query: 295 SKQVKVGDIFEAKVGSVEDYGA 360
SKQV VGDIFE +VG VEDYGA
Sbjct: 61 SKQVNVGDIFEVRVGYVEDYGA 82
[7][TOP]
>UniRef100_B4F9P4 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4F9P4_MAIZE
Length = 366
Score = 122 bits (305), Expect = 2e-26
Identities = 56/117 (47%), Positives = 87/117 (74%)
Frame = +1
Query: 10 SDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEI 189
+DW++A+A K+ G ++S V N GGL+VRF S+ GF+P P LSP H CK+P++ IQ++
Sbjct: 71 ADWESARACKDQGRIFSLPVLRANSGGLIVRFNSLQGFVPNPLLSPAHWCKDPKRPIQDV 130
Query: 190 AKGLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
K LVG+ + VKV ++++ KL+FSEK+A++S +S ++K+GDI++ VGSV YGA
Sbjct: 131 TKDLVGTSISVKVAEVNEEEKKLVFSEKDASWSTYSSRIKIGDIYDGIVGSVFHYGA 187
[8][TOP]
>UniRef100_B6TZ31 RNA binding S1 n=1 Tax=Zea mays RepID=B6TZ31_MAIZE
Length = 366
Score = 120 bits (302), Expect = 4e-26
Identities = 55/117 (47%), Positives = 87/117 (74%)
Frame = +1
Query: 10 SDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEI 189
+DW++A+A K+ G +++ V N GGL+VRF S+ GF+P P LSP H CK+P++ IQ++
Sbjct: 71 ADWESARACKDQGRIFTLPVLRANSGGLIVRFNSLQGFVPNPLLSPAHWCKDPKRPIQDV 130
Query: 190 AKGLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
K LVG+ + VKV ++++ KL+FSEK+A++S +S ++K+GDI++ VGSV YGA
Sbjct: 131 TKDLVGTSISVKVAEVNEEEKKLVFSEKDASWSTYSSRIKIGDIYDGIVGSVFHYGA 187
[9][TOP]
>UniRef100_C5WSY9 Putative uncharacterized protein Sb01g001480 n=1 Tax=Sorghum
bicolor RepID=C5WSY9_SORBI
Length = 366
Score = 119 bits (298), Expect = 1e-25
Identities = 56/116 (48%), Positives = 84/116 (72%)
Frame = +1
Query: 13 DWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIA 192
DW+AA+ YK+ G + + V N GGL+VRF S+ GF+P P LSP H C++P++ IQ+I
Sbjct: 72 DWEAARTYKDQGNILTLPVLRANSGGLIVRFNSLQGFVPNPLLSPAHWCEDPKRPIQDIT 131
Query: 193 KGLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
K LVG+ + VKV ++++ KL+FSEK+A++S +S +K+GDI++ VGSV YGA
Sbjct: 132 KDLVGTSISVKVAEVNEEERKLVFSEKDASWSTYSSLIKIGDIYDGIVGSVFPYGA 187
[10][TOP]
>UniRef100_A9NXR9 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NXR9_PICSI
Length = 381
Score = 119 bits (298), Expect = 1e-25
Identities = 59/120 (49%), Positives = 81/120 (67%)
Frame = +1
Query: 1 RKLSDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTI 180
R DWK A+ YK +G + G+V+G N GG+LVRF+S+ GFLPY Q+SP K+ KTI
Sbjct: 83 RSAVDWKKAETYKGNGEIVEGKVDGSNSGGVLVRFHSLQGFLPYSQMSPSLLLKDRSKTI 142
Query: 181 QEIAKGLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
E AK L+GS + +KVI +++ LIFSEK+A + KFS + GD+FE +V SV +GA
Sbjct: 143 SESAKDLIGSTLSLKVIEVSEEENMLIFSEKQAMWEKFS--INEGDVFEGRVSSVTKFGA 200
[11][TOP]
>UniRef100_C0PNM2 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0PNM2_MAIZE
Length = 370
Score = 116 bits (290), Expect = 9e-25
Identities = 56/121 (46%), Positives = 87/121 (71%), Gaps = 4/121 (3%)
Frame = +1
Query: 10 SDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCK----EPEKT 177
+DW++A+A K+ G ++S V N GGL+VRF S+ GF+P P LSP H CK +P++
Sbjct: 71 ADWESARACKDQGRIFSLPVLRANSGGLIVRFNSLQGFVPNPLLSPAHWCKAKLADPKRP 130
Query: 178 IQEIAKGLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
IQ++ K LVG+ + VKV ++++ KL+FSEK+A++S +S ++K+GDI++ VGSV YG
Sbjct: 131 IQDVTKDLVGTSISVKVAEVNEEEKKLVFSEKDASWSTYSSRIKIGDIYDGIVGSVFHYG 190
Query: 358 A 360
A
Sbjct: 191 A 191
[12][TOP]
>UniRef100_Q75LC0 Os03g0844900 protein n=1 Tax=Oryza sativa Japonica Group
RepID=Q75LC0_ORYSJ
Length = 339
Score = 115 bits (287), Expect = 2e-24
Identities = 55/117 (47%), Positives = 83/117 (70%)
Frame = +1
Query: 10 SDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEI 189
+DW+AA+A ++ G + +V N GGL+VRF S+ GF+P P LSP H CK+P++ IQ++
Sbjct: 79 ADWQAARAERDQGKILKLQVIRANSGGLIVRFNSLQGFVPNPLLSPAHWCKDPKRPIQDV 138
Query: 190 AKGLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
K LVGS + VKV+ ++++ KL+FSEK+A++ S VK+G I++ VGSV YGA
Sbjct: 139 TKDLVGSSISVKVVEVNEEERKLVFSEKDASWFTHSSLVKIGAIYDGIVGSVFHYGA 195
[13][TOP]
>UniRef100_Q75LC1 Putative uncharacterized protein n=2 Tax=Oryza sativa
RepID=Q75LC1_ORYSJ
Length = 379
Score = 115 bits (287), Expect = 2e-24
Identities = 55/117 (47%), Positives = 83/117 (70%)
Frame = +1
Query: 10 SDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEI 189
+DW+AA+A ++ G + +V N GGL+VRF S+ GF+P P LSP H CK+P++ IQ++
Sbjct: 79 ADWQAARAERDQGKILKLQVIRANSGGLIVRFNSLQGFVPNPLLSPAHWCKDPKRPIQDV 138
Query: 190 AKGLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
K LVGS + VKV+ ++++ KL+FSEK+A++ S VK+G I++ VGSV YGA
Sbjct: 139 TKDLVGSSISVKVVEVNEEERKLVFSEKDASWFTHSSLVKIGAIYDGIVGSVFHYGA 195
[14][TOP]
>UniRef100_A9TN20 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TN20_PHYPA
Length = 298
Score = 102 bits (253), Expect = 2e-20
Identities = 50/120 (41%), Positives = 77/120 (64%)
Frame = +1
Query: 1 RKLSDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTI 180
+K +DW+ A+ E G ++ GRV+ N GGLLVRF S+ GFLP+ Q+ K+ K +
Sbjct: 3 QKTADWQKAQKVMEDGTIHRGRVDACNSGGLLVRFGSLQGFLPFSQMDSGRIPKDGSKAL 62
Query: 181 QEIAKGLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
EIAK LVG ++ VK+I ++ + +LIFSE++A + + V+ G ++ KV SV D+GA
Sbjct: 63 AEIAKELVGDLVSVKMIEVNESERRLIFSERQAVLEENLRLVEEGSVYNGKVNSVTDFGA 122
[15][TOP]
>UniRef100_A9SNI7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SNI7_PHYPA
Length = 299
Score = 85.9 bits (211), Expect = 1e-15
Identities = 43/115 (37%), Positives = 70/115 (60%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W+ A+ ESG ++ G V+ N GGL+V F + GFLP+ Q+ ++ +++ E A+
Sbjct: 7 WQKAQETMESGSIHRGVVDACNSGGLVVLFGPLQGFLPFSQMDQGRLLRDSSRSLSEFAE 66
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
LVG + VK+I A++ +LIFSEK+A + ++ G ++E KV SV D+GA
Sbjct: 67 ELVGDFISVKIIEANETTRRLIFSEKQAVLEANLRLLEEGLVYEGKVNSVTDFGA 121
[16][TOP]
>UniRef100_A7NHV1 RNA binding S1 domain protein n=1 Tax=Roseiflexus castenholzii DSM
13941 RepID=A7NHV1_ROSCS
Length = 388
Score = 75.1 bits (183), Expect = 2e-12
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Frame = +1
Query: 13 DWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIA 192
DW+ A G + G+V G+N GGLLV+F I GF+P Q++ +H E+ Q+
Sbjct: 107 DWEEAARLSAEGGIVQGQVIGYNKGGLLVQFNRIRGFVPASQVAQLHGRTAAEER-QQAL 165
Query: 193 KGLVGSVMPVKVILADDDKTKLIFSEKEAA--YSKFSKQ-----VKVGDIFEAKVGSVED 351
+ +VG +P+KVI D D+ +L+ SE+ A + K KQ ++ GDI +V + +
Sbjct: 166 QRMVGQTIPLKVIEVDRDRNRLVLSERSATQEWRKAQKQRLLTELQPGDILTGRVNQLTN 225
Query: 352 YGA 360
+GA
Sbjct: 226 FGA 228
[17][TOP]
>UniRef100_A5V175 RNA binding S1 domain protein n=1 Tax=Roseiflexus sp. RS-1
RepID=A5V175_ROSS1
Length = 393
Score = 75.1 bits (183), Expect = 2e-12
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 7/123 (5%)
Frame = +1
Query: 13 DWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIA 192
DW+ A G + G+V G+N GGLLV+F I GF+P Q++ +H E+ Q+
Sbjct: 107 DWEEAARLSAEGGIVQGQVIGYNKGGLLVQFNRIRGFVPASQVAQLHGRTAAEER-QQAL 165
Query: 193 KGLVGSVMPVKVILADDDKTKLIFSEKEAA--YSKFSKQ-----VKVGDIFEAKVGSVED 351
+ +VG +P+KVI D D+ +L+ SE+ A + K KQ ++ GDI +V + +
Sbjct: 166 QRMVGQTIPLKVIEVDRDRNRLVLSERSATQEWRKAQKQRLLTELQPGDILTGRVNQLTN 225
Query: 352 YGA 360
+GA
Sbjct: 226 FGA 228
[18][TOP]
>UniRef100_UPI00016B22D3 RNA binding S1 domain protein n=1 Tax=candidate division TM7
single-cell isolate TM7c RepID=UPI00016B22D3
Length = 358
Score = 66.6 bits (161), Expect = 8e-10
Identities = 44/121 (36%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMH----SCKEPEKTIQ 183
W+ A ESG V + N GGLLV + + GFLP QLS H + ++ +Q
Sbjct: 96 WEEVSARLESGEVIDIQPYDANRGGLLVEYEGVRGFLPVSQLSAEHYPRVGSSDKDEILQ 155
Query: 184 EIAKGLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFS---KQVKVGDIFEAKVGSVEDY 354
+ L+G M V+++ AD KLIFSEKEA + +++ VGD E V V D+
Sbjct: 156 RL-NNLIGKTMKVRILDADRKSNKLIFSEKEAVKDGLAERFEKLAVGDQVEGVVTGVVDF 214
Query: 355 G 357
G
Sbjct: 215 G 215
[19][TOP]
>UniRef100_A8J2S3 RNA binding protein n=1 Tax=Chlamydomonas reinhardtii
RepID=A8J2S3_CHLRE
Length = 360
Score = 66.6 bits (161), Expect = 8e-10
Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 2/114 (1%)
Frame = +1
Query: 25 AKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSP--MHSCKEPEKTIQEIAKG 198
A + KE G ++ G N GG++V+F + GF+PY +L P + +C + T
Sbjct: 84 AASSKERGETVEVKIVGQNEGGVMVQFGPLRGFMPYNKLDPARLRACANGDLT------K 137
Query: 199 LVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
L+G + ++I AD + +L+ SE++ A ++ +V GD+ E V VEDYGA
Sbjct: 138 LIGQQIKARIITADIARKELVLSERQVAAAEALGRVSEGDVIEGVVTGVEDYGA 191
[20][TOP]
>UniRef100_B8G954 RNA binding S1 domain protein n=1 Tax=Chloroflexus aggregans DSM
9485 RepID=B8G954_CHLAD
Length = 400
Score = 65.9 bits (159), Expect = 1e-09
Identities = 42/126 (33%), Positives = 68/126 (53%), Gaps = 7/126 (5%)
Frame = +1
Query: 1 RKLSDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTI 180
R+ W+A + Y E G + RV+ +N GGLLV + GF+P Q+S + E +K
Sbjct: 121 RQEKSWRALQEYYERGEIIYARVKNYNKGGLLVDLDGVRGFVPASQVSSVSRASEAQKQ- 179
Query: 181 QEIAKGLVGSVMPVKVILADDDKTKLIFSEKEAAY-------SKFSKQVKVGDIFEAKVG 339
E+A+ LV +P+KVI + ++ +LI SE++A + ++ GD+ E V
Sbjct: 180 SEMAR-LVNVELPLKVIEINRNRNRLILSERQALVETRETKKDELLASLQEGDVREGVVS 238
Query: 340 SVEDYG 357
SV D+G
Sbjct: 239 SVCDFG 244
[21][TOP]
>UniRef100_A9WF65 RNA binding S1 domain protein n=2 Tax=Chloroflexus
RepID=A9WF65_CHLAA
Length = 391
Score = 65.9 bits (159), Expect = 1e-09
Identities = 37/123 (30%), Positives = 66/123 (53%), Gaps = 7/123 (5%)
Frame = +1
Query: 13 DWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIA 192
DW+ A+ G + +V GFN GGLLV+F I GF+P Q++ +H ++ Q +
Sbjct: 108 DWEVAEQLFHDGGITRCKVIGFNKGGLLVQFNRIRGFVPSSQVAQLHGRTAADERQQALQ 167
Query: 193 KGLVGSVMPVKVILADDDKTKLIFSEKEAAYS-------KFSKQVKVGDIFEAKVGSVED 351
K +V +P+KVI D ++ +L+ SE+ A + +++ GD+ +V + +
Sbjct: 168 K-MVNQEIPLKVIEVDRERNRLVLSERAATQEWRKAQKHRLLTELQPGDVLVGRVNQLTN 226
Query: 352 YGA 360
+GA
Sbjct: 227 FGA 229
[22][TOP]
>UniRef100_B8G765 RNA binding S1 domain protein n=1 Tax=Chloroflexus aggregans DSM
9485 RepID=B8G765_CHLAD
Length = 397
Score = 64.3 bits (155), Expect = 4e-09
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 7/123 (5%)
Frame = +1
Query: 13 DWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIA 192
DW+ A+ G + +V GFN GGLLV+F I GF+P Q++ +H ++ +
Sbjct: 108 DWEVAEQLFRDGGITRCKVIGFNKGGLLVQFNRIRGFVPASQVAQLHGRTAADERQYALQ 167
Query: 193 KGLVGSVMPVKVILADDDKTKLIFSEKEAAYS-------KFSKQVKVGDIFEAKVGSVED 351
K ++ +P+KVI D ++ +L+ SE+ A + +++ GD+ KV + +
Sbjct: 168 K-MINQEIPLKVIEVDRERNRLVLSERAATQEWRKAQKHRLLTELQPGDVLVGKVNQLTN 226
Query: 352 YGA 360
+GA
Sbjct: 227 FGA 229
[23][TOP]
>UniRef100_Q7XYL3 Ribosomal protein rpS1 n=1 Tax=Bigelowiella natans
RepID=Q7XYL3_BIGNA
Length = 419
Score = 64.3 bits (155), Expect = 4e-09
Identities = 34/115 (29%), Positives = 56/115 (48%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W + E + SG++ N GG ++ S+ GFLP+ Q++ E
Sbjct: 208 WTRVRQMAELDVTLSGKILSHNRGGFIIEVDSLQGFLPFSQMATSVDKDE---------- 257
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
++G V+PVK + D + +L+ S + A S F K KVGD+ V +++ YGA
Sbjct: 258 -MIGKVIPVKFLEVDMENQRLVMSNRRAVASSFKKNYKVGDVVVGTVTALKPYGA 311
[24][TOP]
>UniRef100_A5UU17 SSU ribosomal protein S1P n=1 Tax=Roseiflexus sp. RS-1
RepID=A5UU17_ROSS1
Length = 403
Score = 62.8 bits (151), Expect = 1e-08
Identities = 42/127 (33%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Frame = +1
Query: 1 RKLSDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTI 180
R+ W+ + E+G V RV +N GGLLV + GF+P Q+S + + +K
Sbjct: 128 RQEKSWRRLQQCYETGEVIEARVVNYNKGGLLVNLDGVRGFVPSSQVSGISRGSDTQKQ- 186
Query: 181 QEIAKGLVGSVMPVKVILADDDKTKLIFSEKEAAY-------SKFSKQVKVGDIFEAKVG 339
E+A+ +VG + +KVI + ++ +LI SE++AA + +K GD+ E V
Sbjct: 187 SEMAR-MVGQTLMLKVIEINRNRNRLILSERQAAMDMREGRKGELLSALKEGDVREGIVT 245
Query: 340 SVEDYGA 360
SV D+GA
Sbjct: 246 SVCDFGA 252
[25][TOP]
>UniRef100_A7NKT3 RNA binding S1 domain protein n=1 Tax=Roseiflexus castenholzii DSM
13941 RepID=A7NKT3_ROSCS
Length = 411
Score = 62.4 bits (150), Expect = 2e-08
Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Frame = +1
Query: 1 RKLSDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTI 180
R+ W+ + E+G + +V +N GGLLV + GF+P Q+S + E +K
Sbjct: 126 RQEKSWRRLQQCYETGEIIEAKVINYNKGGLLVNLDGVRGFVPSSQVSGIGRGSEAQKQ- 184
Query: 181 QEIAKGLVGSVMPVKVILADDDKTKLIFSEKEAAY-------SKFSKQVKVGDIFEAKVG 339
E+A+ +VG + +KVI + ++ +LI SE++AA + +K GD+ E V
Sbjct: 185 SEMAR-MVGQTLALKVIEINRNRNRLILSERQAAMDVREGRKGELLSALKEGDVREGVVT 243
Query: 340 SVEDYGA 360
SV D+GA
Sbjct: 244 SVCDFGA 250
[26][TOP]
>UniRef100_A9B766 RNA binding S1 domain protein n=1 Tax=Herpetosiphon aurantiacus
ATCC 23779 RepID=A9B766_HERA2
Length = 397
Score = 62.0 bits (149), Expect = 2e-08
Identities = 37/123 (30%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Frame = +1
Query: 13 DWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIA 192
DW+ A+ E+G + V G+N GGLLV+ + GF+P Q+ +HS E +
Sbjct: 104 DWQEAQTMLENGQIIEAGVVGYNKGGLLVQVGRVRGFVPASQVVNLHSRTGTEGQQSAMT 163
Query: 193 KGLVGSVMPVKVILADDDKTKLIFSEKEAAY-------SKFSKQVKVGDIFEAKVGSVED 351
K +VG +P+KVI D D+ +L+ SE+ A + + ++ G + +V +
Sbjct: 164 K-MVGQNIPLKVIEVDRDRNRLVLSERAAMQRWRQSQKERLLETLEPGAVVTGRVNQLTP 222
Query: 352 YGA 360
+GA
Sbjct: 223 FGA 225
[27][TOP]
>UniRef100_A9WHZ0 RNA binding S1 domain protein n=2 Tax=Chloroflexus
RepID=A9WHZ0_CHLAA
Length = 399
Score = 61.2 bits (147), Expect = 3e-08
Identities = 42/126 (33%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Frame = +1
Query: 1 RKLSDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTI 180
R+ W+A + E G + RV+ +N GGLLV + GF+P Q+S + E +K
Sbjct: 120 RQEKSWRALQECYERGDIIYARVKNYNKGGLLVDLDGVRGFVPASQVSSISRVSETQKQ- 178
Query: 181 QEIAKGLVGSVMPVKVILADDDKTKLIFSEKEA-AYSKFSKQ------VKVGDIFEAKVG 339
E+A+ LV +P+KVI + ++ +LI SE++A ++ SK+ ++ GD+ + V
Sbjct: 179 SEMAR-LVNVELPLKVIEINRNRNRLILSERQALVETRESKKDELLTSLREGDVRDGVVS 237
Query: 340 SVEDYG 357
SV D+G
Sbjct: 238 SVCDFG 243
[28][TOP]
>UniRef100_C0UWP5 SSU ribosomal protein S1P n=1 Tax=Thermobaculum terrenum ATCC
BAA-798 RepID=C0UWP5_9BACT
Length = 431
Score = 60.5 bits (145), Expect = 6e-08
Identities = 37/122 (30%), Positives = 64/122 (52%), Gaps = 7/122 (5%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W+ + E+G + +V G+N GGLLV + GF+P Q+S + S + ++ Q
Sbjct: 156 WRELQQKLETGEIVDCKVVGYNKGGLLVDLGGLRGFIPSSQISFLVSSNDADR--QSELA 213
Query: 196 GLVGSVMPVKVILADDDKTKLIFSE-------KEAAYSKFSKQVKVGDIFEAKVGSVEDY 354
LVG + KVI + + +LI SE KE + + ++++ G I + +V S+ D+
Sbjct: 214 NLVGRTLQAKVIEVNRKRNRLILSERIATQERKETSKERLIEELREGQIVKGRVTSLADF 273
Query: 355 GA 360
GA
Sbjct: 274 GA 275
[29][TOP]
>UniRef100_A9AV75 RNA binding S1 domain protein n=1 Tax=Herpetosiphon aurantiacus
ATCC 23779 RepID=A9AV75_HERA2
Length = 415
Score = 60.1 bits (144), Expect = 8e-08
Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 7/127 (5%)
Frame = +1
Query: 1 RKLSDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTI 180
R+ W+A + E+G V V +N GGLLV + GF+P Q+S + + +K
Sbjct: 125 RQEKSWRALQVNHEAGDVIHAAVTNYNKGGLLVNLSGVRGFVPSSQVSSVSRGSDVQKQ- 183
Query: 181 QEIAKGLVGSVMPVKVILADDDKTKLIFSEKEAAY-------SKFSKQVKVGDIFEAKVG 339
++AK LVG +P+K+I + + +LI SE++A + ++++ G + +V
Sbjct: 184 SDMAK-LVGQTLPLKIIEINRSRNRLILSERQAVQEVRDSRKDQLLEKLEPGAVRTGRVT 242
Query: 340 SVEDYGA 360
S+ D+GA
Sbjct: 243 SLCDFGA 249
[30][TOP]
>UniRef100_A0YL26 RNA binding S1 n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YL26_9CYAN
Length = 295
Score = 60.1 bits (144), Expect = 8e-08
Identities = 35/114 (30%), Positives = 57/114 (50%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W ++ + RV G N GG+ V F S+ GF+P LS +E
Sbjct: 105 WDRLNESQQQAQSFQVRVTGMNRGGVTVDFDSLRGFIPRSHLSE-----------KEDLN 153
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
L+ ++ V ++ D D+ KL+FS++ A+ S Q++VG + E KV SV+ +G
Sbjct: 154 SLIDQLLTVHILELDRDRNKLVFSQRLASESVSFGQLEVGQLIEGKVSSVKPFG 207
[31][TOP]
>UniRef100_B0KVD5 30S ribosomal protein S1 n=1 Tax=uncultured candidate division WWE3
bacterium EJ0ADIGA11YD11 RepID=B0KVD5_9BACT
Length = 414
Score = 58.2 bits (139), Expect = 3e-07
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 14/128 (10%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKE-------PEK 174
W+ A+ E GL+ V +N GGLL + GF+P L +H + E
Sbjct: 106 WQDAEEAFEKGLIIDATVIEYNKGGLLCDSLGLRGFIPLSHLDRVHFANDVAKFAAGSEA 165
Query: 175 TIQEIAKGLVGSVMPVKVILADDDKTKLIFSEKE--AAYSKFSK-----QVKVGDIFEAK 333
++E K L G + VKVI D +K + + SEK+ A YS+ S+ ++K+G E
Sbjct: 166 ELKESLKILSGKTLRVKVIEIDKEKNRFVLSEKDALATYSEESRKKRLSEIKIGSTVEGI 225
Query: 334 VGSVEDYG 357
V + +G
Sbjct: 226 VTGIMPFG 233
[32][TOP]
>UniRef100_Q70DX8 Plastid ribosomal protein S1 n=1 Tax=Chlamydomonas reinhardtii
RepID=Q70DX8_CHLRE
Length = 436
Score = 57.8 bits (138), Expect = 4e-07
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W+ + +E + + VE N GG+LV+F GF+P Q P + +
Sbjct: 218 WQRIRQLQEEDITVTVSVESVNKGGMLVKFGIYDGFIPVSQFGP--------SITPDNME 269
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAA--YSKFSKQVKVGDIFEAKVGSVEDYGA 360
LVG + VK + D++ +L+FS K A+ S + KVGD+ V SV+ YGA
Sbjct: 270 SLVGFELQVKFLEVDEEAERLVFSHKRASSTVSNDIQGFKVGDVVAGVVQSVKPYGA 326
[33][TOP]
>UniRef100_Q0QKQ2 30S ribosomal protein S1 homolog B n=1 Tax=uncultured marine type-A
Synechococcus GOM 3M9 RepID=Q0QKQ2_9SYNE
Length = 423
Score = 57.0 bits (136), Expect = 6e-07
Identities = 34/114 (29%), Positives = 55/114 (48%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W+ K ++ G V V GFN GG+ + GF+P QL + +E
Sbjct: 228 WERVKEMEKQGKVVQVIVNGFNRGGVTCDLEGLRGFIPRSQLQDGENHQE---------- 277
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
LVG + V + + + KL+ SEK AA + +++VG + E +V +V+ YG
Sbjct: 278 -LVGKTLGVAFLEVNSETRKLVLSEKRAAVAARFSELEVGQLVEGQVAAVKPYG 330
[34][TOP]
>UniRef100_A4CS32 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 7805
RepID=A4CS32_SYNPV
Length = 430
Score = 57.0 bits (136), Expect = 6e-07
Identities = 35/114 (30%), Positives = 54/114 (47%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W K ++ G V +V GFN GG+ + GF+P QL E +
Sbjct: 235 WDKVKQLEKEGKVAQVKVSGFNRGGVTCDLEGLRGFIPRSQLQD-----------GENHE 283
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
LVG + V + + D KL+ SEK+AA + +++VG + E V +V+ YG
Sbjct: 284 ALVGKTLGVAFLEVNPDTRKLVLSEKKAATAARFAELEVGQLVEGHVAAVKPYG 337
[35][TOP]
>UniRef100_Q0QKF1 30S ribosomal protein S1 homolog B n=1 Tax=uncultured marine type-A
Synechococcus GOM 3O12 RepID=Q0QKF1_9SYNE
Length = 408
Score = 56.6 bits (135), Expect = 8e-07
Identities = 34/114 (29%), Positives = 55/114 (48%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W K +++ G V V GFN GG+ + GF+P QL + +E
Sbjct: 213 WDKVKEFEKEGKVVQVVVNGFNRGGVTCDLEGLRGFIPRSQLEDGENHQE---------- 262
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
LVG + V I + + KL+ S+K AA + ++++VG + E V +V+ YG
Sbjct: 263 -LVGKTLGVAFIEVNSETRKLVLSQKRAAVAARFQELEVGQLVEGVVAAVKPYG 315
[36][TOP]
>UniRef100_A3YYV2 30S ribosomal protein S1-like B, putative n=1 Tax=Synechococcus sp.
WH 5701 RepID=A3YYV2_9SYNE
Length = 403
Score = 56.6 bits (135), Expect = 8e-07
Identities = 34/114 (29%), Positives = 56/114 (49%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W+ K + +G V +V GFN GG+ + GF+P QL + ++
Sbjct: 208 WEKVKQLEAAGKVVQVKVSGFNRGGVTCDLEGLRGFIPRSQLQNGENHEQ---------- 257
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
LVG+ V + + D KL+ SEK AA + +++VG + + +V SV+ YG
Sbjct: 258 -LVGTSFAVAFLEVNADTRKLVLSEKRAASASLLAELEVGQLVDGQVVSVKPYG 310
[37][TOP]
>UniRef100_A5GUD2 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. RCC307
RepID=A5GUD2_SYNR3
Length = 397
Score = 55.8 bits (133), Expect = 1e-06
Identities = 34/114 (29%), Positives = 53/114 (46%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W + ++ G V ++ GFN GG + GF+P QL+ E +
Sbjct: 202 WDKVRQLEKEGKVVQVKITGFNRGGCTCDLEGLRGFIPRSQLNE-----------GENHE 250
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
LVG + V + + D KL+ SEK+AA + F ++VG + V SV+ YG
Sbjct: 251 ALVGKTVGVAFLEVNPDTRKLVLSEKKAAMAAFFADLEVGQLVSGLVTSVKPYG 304
[38][TOP]
>UniRef100_Q0QM09 30S ribosomal protein S1-like protein B n=1 Tax=uncultured marine
type-A Synechococcus 5B2 RepID=Q0QM09_9SYNE
Length = 411
Score = 55.8 bits (133), Expect = 1e-06
Identities = 34/114 (29%), Positives = 54/114 (47%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W K ++ G V V GFN GG+ + GF+P QL + +E
Sbjct: 216 WDKVKELEKQGKVVQVIVNGFNRGGVTCDLEGLRGFIPRSQLQDGENHQE---------- 265
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
LVG + V I + + KL+ SEK AA + +++++G + E V +V+ YG
Sbjct: 266 -LVGKTLGVAFIEVNSETRKLVLSEKRAAIAARFQELEIGQLVEGLVAAVKPYG 318
[39][TOP]
>UniRef100_B5ILL4 Putative uncharacterized protein n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5ILL4_9CHRO
Length = 422
Score = 55.8 bits (133), Expect = 1e-06
Identities = 33/114 (28%), Positives = 54/114 (47%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W+ + ++ G V +V GFN GG+ + GF+P QL E +
Sbjct: 227 WEKVRVLEKEGKVVQVKVNGFNRGGVTCDLEGLRGFIPRSQLQE-----------GENHE 275
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
LVG + V + + + KL+ SEK AA + +++VG + E V S++ YG
Sbjct: 276 ALVGKTLGVTFLEVNPETRKLVLSEKRAATAARFAELEVGQLVEGVVASIKPYG 329
[40][TOP]
>UniRef100_Q3AV59 SSU ribosomal protein S1P n=1 Tax=Synechococcus sp. CC9902
RepID=Q3AV59_SYNS9
Length = 412
Score = 55.5 bits (132), Expect = 2e-06
Identities = 35/114 (30%), Positives = 53/114 (46%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W K ++ G V V GFN GG+ + GF+P QL + +E
Sbjct: 217 WDKVKVLEKEGKVVQVIVSGFNRGGVTCDLEGLRGFIPRSQLQDGENHQE---------- 266
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
LVG + V + + KL+ SEK AA + ++++VG + E V SV+ YG
Sbjct: 267 -LVGKTLGVAFLEVNSGTRKLVLSEKRAATAARFQELEVGQLVEGLVASVKPYG 319
[41][TOP]
>UniRef100_A5GJG3 30S ribosomal protein S1 n=1 Tax=Synechococcus sp. WH 7803
RepID=A5GJG3_SYNPW
Length = 403
Score = 55.5 bits (132), Expect = 2e-06
Identities = 34/114 (29%), Positives = 54/114 (47%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W K ++ G V +V GFN GG+ + GF+P QL E +
Sbjct: 208 WDKVKQLEKEGKVAQVKVSGFNRGGVTCDLEGLRGFIPRSQLQE-----------GENHE 256
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
LVG + V + + + KL+ SEK+AA + +++VG + E V +V+ YG
Sbjct: 257 ALVGKTLGVAFLEVNPETRKLVLSEKKAATAARFAELEVGQLVEGHVAAVKPYG 310
[42][TOP]
>UniRef100_Q05RJ7 Putative uncharacterized protein n=1 Tax=Synechococcus sp. RS9916
RepID=Q05RJ7_9SYNE
Length = 439
Score = 55.5 bits (132), Expect = 2e-06
Identities = 34/114 (29%), Positives = 53/114 (46%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W K ++ G V +V GFN GG+ + GF+P QL E +
Sbjct: 244 WDKVKVLEKEGKVVQVKVSGFNRGGVTCDLEGLRGFIPRSQLQD-----------GENHE 292
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
LVG + V + + + KL+ SEK AA + +++VG + E V +V+ YG
Sbjct: 293 SLVGKTLGVAFLEVNSETRKLVLSEKRAATAARFSELEVGQLVEGHVVAVKPYG 346
[43][TOP]
>UniRef100_C7HUB3 Putative uncharacterized protein n=1 Tax=Anaerococcus vaginalis
ATCC 51170 RepID=C7HUB3_9FIRM
Length = 691
Score = 55.5 bits (132), Expect = 2e-06
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Frame = +1
Query: 7 LSDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQE 186
+ +WK + E+ G V G N GGL R I GF+P Q++P +
Sbjct: 370 MKNWKNLREAYENDQTVEGDVTGANKGGLTARVMGINGFVPASQIAPY---------FVK 420
Query: 187 IAKGLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQ---VKVGDIFEAKVGSVEDYG 357
K VG +K+I D+ K +L+ S K+ K +Q ++ G + KV + D+G
Sbjct: 421 NFKKFVGEHWDLKIISIDERKNRLVLSRKDIVEEKLDEQWDELEEGQVITGKVARLTDFG 480
Query: 358 A 360
A
Sbjct: 481 A 481
[44][TOP]
>UniRef100_A6BHV7 Putative uncharacterized protein n=1 Tax=Dorea longicatena DSM
13814 RepID=A6BHV7_9FIRM
Length = 269
Score = 55.5 bits (132), Expect = 2e-06
Identities = 38/122 (31%), Positives = 58/122 (47%), Gaps = 7/122 (5%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W K+Y E G V +VEG GG + + GF+P +LS + I+++
Sbjct: 69 WNVVKSYMEKGTVLPVKVEGIVNGGAIAMVEGLRGFIPASRLSLSY--------IEDLET 120
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQ-------VKVGDIFEAKVGSVEDY 354
L+ + VKVI D+ +L+ S +E K K+ VKVG I V S+++Y
Sbjct: 121 YLLKDI-EVKVIDVDEANNRLVLSAREILQEKARKEREAKIAAVKVGSIVTGTVESLQNY 179
Query: 355 GA 360
GA
Sbjct: 180 GA 181
[45][TOP]
>UniRef100_Q3ALN4 RNA binding S1 n=1 Tax=Synechococcus sp. CC9605 RepID=Q3ALN4_SYNSC
Length = 424
Score = 55.1 bits (131), Expect = 2e-06
Identities = 34/114 (29%), Positives = 54/114 (47%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W K ++ G V V FN GG+ + GF+P QL + +E
Sbjct: 229 WDRVKELEKQGKVVQVIVNNFNRGGVTCDLQGLRGFIPRSQLQNGENHQE---------- 278
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
LVG + V I + + KL+ SEK AA ++ + ++VG + E +V +V+ YG
Sbjct: 279 -LVGKTLGVAFIEVNSETRKLVLSEKRAAVAERFQDLEVGQLVEGQVAAVKPYG 331
[46][TOP]
>UniRef100_B4W413 S1 RNA binding domain protein n=1 Tax=Microcoleus chthonoplastes
PCC 7420 RepID=B4W413_9CYAN
Length = 299
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/114 (25%), Positives = 56/114 (49%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W ++SG +V G N GG+ + + + GF+P L+ + +
Sbjct: 111 WDQLAQVQDSGKSLQVQVTGVNKGGVTIDWQGLRGFIPRSHLNQRGNLES---------- 160
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
L+G + V ++ AD D++KL+FS++EA + ++VG + E V ++ +G
Sbjct: 161 -LIGQSLTVSILEADRDRSKLVFSQREATRAASFSMLEVGQLVEGTVSNIRPFG 213
[47][TOP]
>UniRef100_A9RWH7 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWH7_PHYPA
Length = 397
Score = 55.1 bits (131), Expect = 2e-06
Identities = 28/115 (24%), Positives = 56/115 (48%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W+ +V G + N GG +V + GF+P+ Q+S + PE+
Sbjct: 175 WERCAQMLADDVVVRGTILSHNSGGFVVDVEGLRGFVPFSQVSARGAQSNPEE------- 227
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
L+ +P+K + D+++T+L+ S ++A +++ +G + V +V+ YGA
Sbjct: 228 -LLNKEIPLKFLEVDEERTRLVLSNRKATFAENQSAFGIGSVVVGTVQTVKPYGA 281
[48][TOP]
>UniRef100_Q0QKJ9 30S ribosomal protein S1 homolog B n=1 Tax=uncultured marine type-A
Synechococcus GOM 3O6 RepID=Q0QKJ9_9SYNE
Length = 408
Score = 54.7 bits (130), Expect = 3e-06
Identities = 34/114 (29%), Positives = 54/114 (47%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W K ++ G V V GFN GG+ + GF+P QL + +E
Sbjct: 213 WDKVKELEKQGKVVQVIVNGFNRGGVTCDLEGLRGFIPRSQLQEGDNHQE---------- 262
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
LVG + V I + + KL+ S+K AA + ++++VG + E V +V+ YG
Sbjct: 263 -LVGKTLGVAFIEVNSETRKLVLSQKRAAVAARFQELEVGQLVEGVVAAVKPYG 315
[49][TOP]
>UniRef100_D0CHB9 SSU ribosomal protein S1P n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CHB9_9SYNE
Length = 390
Score = 54.7 bits (130), Expect = 3e-06
Identities = 34/114 (29%), Positives = 53/114 (46%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W K + G V V GFN GG+ + GF+P QL + +E
Sbjct: 195 WDRVKELDKQGKVVQVIVNGFNRGGVTCDLEGLRGFIPRSQLQNGENHQE---------- 244
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
VG + V I + + KL+ SEK AA ++ + ++VG + E +V +V+ YG
Sbjct: 245 -FVGKTLGVAFIEVNSETRKLVLSEKRAAVAERFQDLEVGQLVEGQVAAVKPYG 297
[50][TOP]
>UniRef100_B6W7S9 Putative uncharacterized protein n=1 Tax=Anaerococcus hydrogenalis
DSM 7454 RepID=B6W7S9_9FIRM
Length = 692
Score = 54.7 bits (130), Expect = 3e-06
Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 3/121 (2%)
Frame = +1
Query: 7 LSDWKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQE 186
+ +WK + E+ G + G N GGL R I GF+P Q++P +
Sbjct: 370 MKNWKNLREAFENDQTVEGDITGSNKGGLTARVMGINGFVPASQIAPY---------FVK 420
Query: 187 IAKGLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQ---VKVGDIFEAKVGSVEDYG 357
K VG +K+I D+ K +L+ S K+ K +Q ++ G + KV + D+G
Sbjct: 421 NFKKFVGEHWDLKIISIDERKNRLVLSRKDIVEEKLDEQWDELEEGQVITGKVARLTDFG 480
Query: 358 A 360
A
Sbjct: 481 A 481
[51][TOP]
>UniRef100_Q7U5G7 30S ribosomal protein S1 homolog B, putative Nbp1 n=1
Tax=Synechococcus sp. WH 8102 RepID=Q7U5G7_SYNPX
Length = 406
Score = 54.3 bits (129), Expect = 4e-06
Identities = 34/114 (29%), Positives = 54/114 (47%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W K ++ G V V GFN GG+ + GF+P QL + +E
Sbjct: 211 WDKVKELEKHGKVVQVIVNGFNRGGVTCDLEGLRGFIPRSQLQEGDNHQE---------- 260
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
LVG + V I + + KL+ S+K AA + ++++VG + E V +V+ YG
Sbjct: 261 -LVGKTLGVAFIEVNSETRKLVLSQKRAAVAARFQELEVGQLVEGVVAAVKPYG 313
[52][TOP]
>UniRef100_Q0I8M6 Ribosomal protein S1 n=1 Tax=Synechococcus sp. CC9311
RepID=Q0I8M6_SYNS3
Length = 401
Score = 53.9 bits (128), Expect = 5e-06
Identities = 32/114 (28%), Positives = 53/114 (46%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W K ++ G V +V GFN GG+ + GF+P QL E +
Sbjct: 206 WDKVKQLEKDGRVSQVKVTGFNRGGVTCDLEGLRGFIPRSQLQD-----------GENHE 254
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
LVG + V + + + KL+ SEK AA + ++++G + E V +++ YG
Sbjct: 255 TLVGKTLGVAFLEVNSETRKLVLSEKRAATAARFSELEIGQLVEGHVAAIKPYG 308
[53][TOP]
>UniRef100_B7K791 RNA binding S1 domain protein n=1 Tax=Cyanothece sp. PCC 7424
RepID=B7K791_CYAP7
Length = 284
Score = 53.5 bits (127), Expect = 7e-06
Identities = 32/114 (28%), Positives = 47/114 (41%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W K ESG RV G N GG+ + GF+P L +E
Sbjct: 95 WNQVKEIAESGTSVQMRVTGINRGGVTGEVEGLRGFIPRSHLVE-----------KEDLD 143
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
LVG + I D D KL+ S+++ + Q+ +G + E KV ++ YG
Sbjct: 144 SLVGQSITANFIQVDPDNNKLVLSQRQLVRAAAMSQLTIGTLVEGKVAKIQPYG 197
[54][TOP]
>UniRef100_A2C7R6 30S ribosomal protein S1 protein B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. MIT 9303
RepID=A2C7R6_PROM3
Length = 481
Score = 53.5 bits (127), Expect = 7e-06
Identities = 33/114 (28%), Positives = 54/114 (47%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W + ++ G V +V GFN GG+ + GF+P QL E +
Sbjct: 286 WSKVQQMEKEGKVAQVKVNGFNRGGVTCDLEGLRGFIPRSQLQN-----------GENHE 334
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
LVG + V + + + KL+ SEK AA + +++VG + E +V +V+ YG
Sbjct: 335 ALVGKTLGVAFLEVNPETRKLVLSEKRAATAARFSELEVGQLVEGQVVAVKPYG 388
[55][TOP]
>UniRef100_A2BUU3 30S ribosomal protein S1, protein A n=1 Tax=Prochlorococcus marinus
str. MIT 9515 RepID=A2BUU3_PROM5
Length = 363
Score = 53.5 bits (127), Expect = 7e-06
Identities = 31/108 (28%), Positives = 54/108 (50%)
Frame = +1
Query: 37 KESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAKGLVGSVM 216
KE +YS V N GG LVR + GF+P +S ++I + L G +
Sbjct: 166 KEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHISA-----------RKIKEDLEGEYL 213
Query: 217 PVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
P+K + D+++ +L+ S + A K +++VG++ V ++ YGA
Sbjct: 214 PLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVVGSVKGIKPYGA 261
[56][TOP]
>UniRef100_Q060S3 RNA binding S1 n=1 Tax=Synechococcus sp. BL107 RepID=Q060S3_9SYNE
Length = 412
Score = 53.5 bits (127), Expect = 7e-06
Identities = 33/114 (28%), Positives = 53/114 (46%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W K ++ G V V GFN GG+ + GF+P QL + +E
Sbjct: 217 WDKVKVLEKEGKVVQVIVSGFNRGGVTCDLEGLRGFIPRSQLQDGENHQE---------- 266
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
LVG + V + + KL+ SEK A+ + ++++VG + + V SV+ YG
Sbjct: 267 -LVGKTLGVAFLEVNSGTRKLVLSEKRASVAARFQELEVGQLVDGLVASVKPYG 319
[57][TOP]
>UniRef100_Q01DM0 30S ribosomal protein S1 (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q01DM0_OSTTA
Length = 250
Score = 53.5 bits (127), Expect = 7e-06
Identities = 33/115 (28%), Positives = 53/115 (46%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W + + +G V N GGLLV + GF+P + +E
Sbjct: 47 WDRCREAQAEDAALTGEVLSVNRGGLLVEVEKLRGFVPQSHIGIRTLNREE--------- 97
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
LVG +P K I D++K +L+ S + A ++ ++VGD+ E V +V+ YGA
Sbjct: 98 -LVGQQLPFKFIEVDEEKNRLVLSHRLATDMVSAEGLEVGDVVEGMVQAVKPYGA 151
[58][TOP]
>UniRef100_A7Q8U9 Chromosome chr5 scaffold_64, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7Q8U9_VITVI
Length = 410
Score = 53.5 bits (127), Expect = 7e-06
Identities = 29/115 (25%), Positives = 59/115 (51%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W+ + + +V G+V G N GG++ + GF+P+ Q+S + +E
Sbjct: 173 WERCRQLQAEDVVVKGKVVGANKGGVVALVEGLRGFVPFSQISSKTTAEE---------- 222
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
L+ +PVK + D+++++L+ S ++ A + Q+ +G + V S++ YGA
Sbjct: 223 -LLDKELPVKFVEVDEEQSRLVLSNRK-AMADSQAQLGIGSVVTGTVQSLKPYGA 275
[59][TOP]
>UniRef100_Q7V6D2 30S ribosomal protein S1 homolog B, putative Nbp1 n=1
Tax=Prochlorococcus marinus str. MIT 9313
RepID=Q7V6D2_PROMM
Length = 421
Score = 53.1 bits (126), Expect = 9e-06
Identities = 32/114 (28%), Positives = 54/114 (47%)
Frame = +1
Query: 16 WKAAKAYKESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAK 195
W + ++ G V +V GFN GG+ + GF+P QL E +
Sbjct: 226 WSKVQQMEKEGKVAQVKVNGFNRGGVTCDLEGLRGFIPRSQLQN-----------GENHE 274
Query: 196 GLVGSVMPVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYG 357
L+G + V + + + KL+ SEK AA + +++VG + E +V +V+ YG
Sbjct: 275 ALIGKTLGVAFLEVNPETRKLVLSEKRAATAARFSELEVGQLVEGQVVAVKPYG 328
[60][TOP]
>UniRef100_Q7V2Y7 30S ribosomal protein S1, homolog A n=1 Tax=Prochlorococcus marinus
subsp. pastoris str. CCMP1986 RepID=Q7V2Y7_PROMP
Length = 363
Score = 53.1 bits (126), Expect = 9e-06
Identities = 31/108 (28%), Positives = 54/108 (50%)
Frame = +1
Query: 37 KESGLVYSGRVEGFNGGGLLVRFYSILGFLPYPQLSPMHSCKEPEKTIQEIAKGLVGSVM 216
KE +YS V N GG LVR + GF+P +S ++I + L G +
Sbjct: 166 KEDATIYS-EVFATNRGGALVRVEGLRGFIPGSHISA-----------RKIKEDLEGEYL 213
Query: 217 PVKVILADDDKTKLIFSEKEAAYSKFSKQVKVGDIFEAKVGSVEDYGA 360
P+K + D+++ +L+ S + A K +++VG++ V ++ YGA
Sbjct: 214 PLKFLEVDEERNRLVLSHRRALVEKKMNRLEVGEVVIGSVKGIKPYGA 261