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[1][TOP]
>UniRef100_C6T928 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Glycine max
RepID=C6T928_SOYBN
Length = 324
Score = 191 bits (485), Expect = 2e-47
Identities = 97/128 (75%), Positives = 106/128 (82%)
Frame = +1
Query: 13 VPTSIPTSSSSSNSQQSLPSRRRCRNLRSFCSVNATRAKIPTPHLNPNDPFLSKLASVAA 192
VPTS P + S + +R +CRNL++ CSVNA AKIP P LNP DPFLSKLAS+AA
Sbjct: 10 VPTSTPITPQSPTA-----TRTKCRNLKTSCSVNA--AKIPMPPLNPKDPFLSKLASIAA 62
Query: 193 SSPEMLLNRPVNSDTPPYLDIFDSPTLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHGR 372
SSP+ LLN P NSDTPP+LDIFDSP LMATPAQVERSVSYNEHRPRRPPPDLPSLLLHGR
Sbjct: 63 SSPDTLLNTPKNSDTPPFLDIFDSPKLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHGR 122
Query: 373 IVYIGMPL 396
IVYIGMPL
Sbjct: 123 IVYIGMPL 130
[2][TOP]
>UniRef100_B9RFA9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ricinus
communis RepID=B9RFA9_RICCO
Length = 325
Score = 180 bits (456), Expect = 5e-44
Identities = 88/131 (67%), Positives = 104/131 (79%)
Frame = +1
Query: 4 VPAVPTSIPTSSSSSNSQQSLPSRRRCRNLRSFCSVNATRAKIPTPHLNPNDPFLSKLAS 183
+P SIP+SSSS++S RR R +N + +KIP P +NP DPFLSKLAS
Sbjct: 8 LPITTCSIPSSSSSASSNSQSLKRRNLR-------INCSSSKIPMPPINPKDPFLSKLAS 60
Query: 184 VAASSPEMLLNRPVNSDTPPYLDIFDSPTLMATPAQVERSVSYNEHRPRRPPPDLPSLLL 363
+AA+SP+ LL+RP+ SDTPP+LD+FDSP LMATPAQVERSVSYNEHRPR+PPPDLPSLLL
Sbjct: 61 IAANSPDSLLDRPITSDTPPFLDLFDSPKLMATPAQVERSVSYNEHRPRKPPPDLPSLLL 120
Query: 364 HGRIVYIGMPL 396
HGRIVYIGMPL
Sbjct: 121 HGRIVYIGMPL 131
[3][TOP]
>UniRef100_A7PS07 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Vitis
vinifera RepID=A7PS07_VITVI
Length = 322
Score = 163 bits (413), Expect = 5e-39
Identities = 86/127 (67%), Positives = 98/127 (77%), Gaps = 1/127 (0%)
Frame = +1
Query: 19 TSIPTSSSSSNSQQSLPSRRRCRNLRSFCSVNAT-RAKIPTPHLNPNDPFLSKLASVAAS 195
+SIP+SSS S ++ ++ CS+ T AKIP +NP DPFLSKLASVAA+
Sbjct: 11 SSIPSSSSPSTTRPIF---------KTHCSMKPTCSAKIPMSPINPKDPFLSKLASVAAT 61
Query: 196 SPEMLLNRPVNSDTPPYLDIFDSPTLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHGRI 375
SPE LL RP SD+ P+LD+FDSP LMATPAQVERSVSYNEHRPRRPPPDLPSLLLHGRI
Sbjct: 62 SPERLLQRPSGSDSLPFLDLFDSPKLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHGRI 121
Query: 376 VYIGMPL 396
VYIGMPL
Sbjct: 122 VYIGMPL 128
[4][TOP]
>UniRef100_A9PFT0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Populus
trichocarpa RepID=A9PFT0_POPTR
Length = 341
Score = 162 bits (409), Expect = 1e-38
Identities = 86/137 (62%), Positives = 104/137 (75%), Gaps = 6/137 (4%)
Frame = +1
Query: 4 VPAVPTSIPTSSSSSNSQQSLPSRRRCRNLRSFCSVNA----TRAKIPTPHLNPNDPFLS 171
+P S+P+S+ S S + P+ ++ F S+NA + + IP P +NP DPFLS
Sbjct: 11 LPLTTCSLPSSTLYSKSIKLKPNTIDNLRIKCFASINARNSSSSSNIPMPPINPKDPFLS 70
Query: 172 KLASVAASSPEMLL-NRPVN-SDTPPYLDIFDSPTLMATPAQVERSVSYNEHRPRRPPPD 345
KLAS+AA+SP+ LL + PV+ SDTPPYLDIF+SP LMATPAQVERSVSYNEHRPR PPPD
Sbjct: 71 KLASIAATSPDSLLQDSPVSGSDTPPYLDIFESPKLMATPAQVERSVSYNEHRPRTPPPD 130
Query: 346 LPSLLLHGRIVYIGMPL 396
LPSLLLHGRIVYIGMPL
Sbjct: 131 LPSLLLHGRIVYIGMPL 147
[5][TOP]
>UniRef100_Q8L770 ATP-dependent Clp protease proteolytic subunit-related protein 3,
chloroplastic n=1 Tax=Arabidopsis thaliana
RepID=CLPR3_ARATH
Length = 330
Score = 162 bits (409), Expect = 1e-38
Identities = 83/126 (65%), Positives = 96/126 (76%), Gaps = 2/126 (1%)
Frame = +1
Query: 25 IPTSSSSSNSQQSLPSRRRCRNLRSFCSVNATRA--KIPTPHLNPNDPFLSKLASVAASS 198
+P SSS S + RNL++F +A KIP P +NP DPFLS LAS+AA+S
Sbjct: 13 LPRSSSFSPHPPLSSNSSGRRNLKTFRYAFRAKASAKIPMPPINPKDPFLSTLASIAANS 72
Query: 199 PEMLLNRPVNSDTPPYLDIFDSPTLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHGRIV 378
PE LLNRPVN+D PPYLDIFDSP LM++PAQVERSV+YNEHRPR PPPDLPS+LL GRIV
Sbjct: 73 PEKLLNRPVNADVPPYLDIFDSPQLMSSPAQVERSVAYNEHRPRTPPPDLPSMLLDGRIV 132
Query: 379 YIGMPL 396
YIGMPL
Sbjct: 133 YIGMPL 138
[6][TOP]
>UniRef100_A5C9J9 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5C9J9_VITVI
Length = 154
Score = 155 bits (393), Expect = 1e-36
Identities = 86/141 (60%), Positives = 99/141 (70%), Gaps = 15/141 (10%)
Frame = +1
Query: 19 TSIPTSSSSSNSQQSLPSRRRCRNLRSFCSVNAT-RAKIPTPHLNPNDPFLSKLASVAAS 195
+SIP+SSS S ++ ++ CS+ T AKIP P +NP DPFLSKLASVAA+
Sbjct: 11 SSIPSSSSPSTTRPIF---------KTHCSMKPTCSAKIPMPPINPKDPFLSKLASVAAT 61
Query: 196 SPEMLLNRPVNSDTPPYLDIFDSPTLMATPAQ--------------VERSVSYNEHRPRR 333
SPE LL RP SD+ P+LD+FDSP LMATPAQ VERSVSYNEHRPRR
Sbjct: 62 SPERLLQRPSGSDSLPFLDLFDSPKLMATPAQAIIHISPDPDENLNVERSVSYNEHRPRR 121
Query: 334 PPPDLPSLLLHGRIVYIGMPL 396
PPPDLPSLLLHGRIVYIGMP+
Sbjct: 122 PPPDLPSLLLHGRIVYIGMPV 142
[7][TOP]
>UniRef100_B7FKZ0 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Medicago
truncatula RepID=B7FKZ0_MEDTR
Length = 322
Score = 141 bits (356), Expect = 2e-32
Identities = 81/130 (62%), Positives = 100/130 (76%), Gaps = 2/130 (1%)
Frame = +1
Query: 13 VPTSIPTSSSSSNSQQSLPSRRRCRNLRSFCSVNA-TRAKIPTPHLNPNDPFLSKLASVA 189
VP S+PTS +S+++ + P+R LR+ +VNA +++KIP NPNDPFLSKLASVA
Sbjct: 7 VPISMPTSMPASSTRFT-PTR-----LRTLRTVNAISKSKIP---FNPNDPFLSKLASVA 57
Query: 190 ASSPEMLLNRPVNSDTPPYLDIFDSPTLMATPAQVERSVSYN-EHRPRRPPPDLPSLLLH 366
SSPE L N + D P+LDIFDSP LMATPAQ+ERS SY+ + RP+RPPPDLPSLLL+
Sbjct: 58 ESSPETLFNPSSSPDNLPFLDIFDSPQLMATPAQLERSASYSQQRRPKRPPPDLPSLLLN 117
Query: 367 GRIVYIGMPL 396
GRIVYIGMPL
Sbjct: 118 GRIVYIGMPL 127
[8][TOP]
>UniRef100_A9SG20 ATP-dependent Clp protease proteolytic subunit n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9SG20_PHYPA
Length = 298
Score = 114 bits (285), Expect = 3e-24
Identities = 61/90 (67%), Positives = 68/90 (75%), Gaps = 4/90 (4%)
Frame = +1
Query: 139 PHLNPNDPFLSKLASVAASSPEM----LLNRPVNSDTPPYLDIFDSPTLMATPAQVERSV 306
PH +PNDPFL+KLA AA+S EM L +SD PP LDI +P +MA PAQVER+
Sbjct: 8 PH-SPNDPFLAKLA--AAASTEMGKAQLAGARSDSDGPPLLDILTNPVMMAAPAQVERTS 64
Query: 307 SYNEHRPRRPPPDLPSLLLHGRIVYIGMPL 396
YNEHRPRRPPPDLPSLLLH RIVYIGMPL
Sbjct: 65 GYNEHRPRRPPPDLPSLLLHSRIVYIGMPL 94
[9][TOP]
>UniRef100_A9RZ41 ATP-dependent Clp protease proteolytic subunit n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9RZ41_PHYPA
Length = 296
Score = 111 bits (278), Expect = 2e-23
Identities = 61/90 (67%), Positives = 67/90 (74%), Gaps = 4/90 (4%)
Frame = +1
Query: 139 PHLNPNDPFLSKLASVAASSPEM----LLNRPVNSDTPPYLDIFDSPTLMATPAQVERSV 306
PH +PNDPFL+KLA AA+S EM L SD PP LDI +P +MA PAQVERS
Sbjct: 6 PH-SPNDPFLAKLA--AAASTEMGKAQLAGASGVSDGPPLLDILSNPVMMAAPAQVERSS 62
Query: 307 SYNEHRPRRPPPDLPSLLLHGRIVYIGMPL 396
YNEHRPRRPPPDLPSLLL+ RIVYIGMPL
Sbjct: 63 GYNEHRPRRPPPDLPSLLLNSRIVYIGMPL 92
[10][TOP]
>UniRef100_C0PPS8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea
sitchensis RepID=C0PPS8_PICSI
Length = 327
Score = 108 bits (269), Expect = 2e-22
Identities = 58/91 (63%), Positives = 67/91 (73%), Gaps = 2/91 (2%)
Frame = +1
Query: 130 IPTPHLNPNDPFLSKLASVAASSPEMLLNRPVNSDTPPYLDIFDS--PTLMATPAQVERS 303
IP P NPNDPFLS LA A+ S +P + DTPP LD+ + P LMA PAQVER+
Sbjct: 38 IPLPPRNPNDPFLSNLAFTASGSQA----KPRSDDTPPLLDLVANITPRLMAGPAQVERA 93
Query: 304 VSYNEHRPRRPPPDLPSLLLHGRIVYIGMPL 396
SYNEHRPRRPPPDLPSLLL+ RI++IGMPL
Sbjct: 94 -SYNEHRPRRPPPDLPSLLLNSRIIFIGMPL 123
[11][TOP]
>UniRef100_Q10LK6 ATP-dependent Clp protease proteolytic subunit, putative, expressed
n=1 Tax=Oryza sativa Japonica Group RepID=Q10LK6_ORYSJ
Length = 230
Score = 106 bits (265), Expect = 7e-22
Identities = 75/144 (52%), Positives = 89/144 (61%), Gaps = 12/144 (8%)
Frame = +1
Query: 1 RVPAVPTSIPTSSSSSNSQQSLPSR--RRCRNLRSFCSVNATRAKI---PTPHLNPN-DP 162
R+P P++ P+S +SS S SLP R+ R + S RA P P NP DP
Sbjct: 9 RLPT-PSTAPSSGASS-SFLSLPPTLLRQARGGAAASSALVARAASGGSPNPLFNPRADP 66
Query: 163 FLSKLASVAASSPEMLLNRPVNS-----DTPPYLDIFDSPTLMATPAQVERSVS-YNEHR 324
FLS LA A+SPE L D P+L+IF + LMA+PAQVERS S Y++HR
Sbjct: 67 FLSTLA---AASPEELQAAAAGGGRRGDDHLPFLEIFQNAKLMASPAQVERSSSSYSQHR 123
Query: 325 PRRPPPDLPSLLLHGRIVYIGMPL 396
PRRPPPDLPSLLLHGRIVYIGMPL
Sbjct: 124 PRRPPPDLPSLLLHGRIVYIGMPL 147
[12][TOP]
>UniRef100_Q0DRY8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Oryza sativa
Japonica Group RepID=Q0DRY8_ORYSJ
Length = 349
Score = 106 bits (265), Expect = 7e-22
Identities = 75/144 (52%), Positives = 89/144 (61%), Gaps = 12/144 (8%)
Frame = +1
Query: 1 RVPAVPTSIPTSSSSSNSQQSLPSR--RRCRNLRSFCSVNATRAKI---PTPHLNPN-DP 162
R+P P++ P+S +SS S SLP R+ R + S RA P P NP DP
Sbjct: 9 RLPT-PSTAPSSGASS-SFLSLPPTLLRQARGGAAASSALVARAASGGSPNPLFNPRADP 66
Query: 163 FLSKLASVAASSPEMLLNRPVNS-----DTPPYLDIFDSPTLMATPAQVERSVS-YNEHR 324
FLS LA A+SPE L D P+L+IF + LMA+PAQVERS S Y++HR
Sbjct: 67 FLSTLA---AASPEELQAAAAGGGRRGDDHLPFLEIFQNAKLMASPAQVERSSSSYSQHR 123
Query: 325 PRRPPPDLPSLLLHGRIVYIGMPL 396
PRRPPPDLPSLLLHGRIVYIGMPL
Sbjct: 124 PRRPPPDLPSLLLHGRIVYIGMPL 147
[13][TOP]
>UniRef100_Q10LK7 ATP-dependent Clp protease proteolytic subunit n=2 Tax=Oryza sativa
RepID=Q10LK7_ORYSJ
Length = 341
Score = 106 bits (265), Expect = 7e-22
Identities = 75/144 (52%), Positives = 89/144 (61%), Gaps = 12/144 (8%)
Frame = +1
Query: 1 RVPAVPTSIPTSSSSSNSQQSLPSR--RRCRNLRSFCSVNATRAKI---PTPHLNPN-DP 162
R+P P++ P+S +SS S SLP R+ R + S RA P P NP DP
Sbjct: 9 RLPT-PSTAPSSGASS-SFLSLPPTLLRQARGGAAASSALVARAASGGSPNPLFNPRADP 66
Query: 163 FLSKLASVAASSPEMLLNRPVNS-----DTPPYLDIFDSPTLMATPAQVERSVS-YNEHR 324
FLS LA A+SPE L D P+L+IF + LMA+PAQVERS S Y++HR
Sbjct: 67 FLSTLA---AASPEELQAAAAGGGRRGDDHLPFLEIFQNAKLMASPAQVERSSSSYSQHR 123
Query: 325 PRRPPPDLPSLLLHGRIVYIGMPL 396
PRRPPPDLPSLLLHGRIVYIGMPL
Sbjct: 124 PRRPPPDLPSLLLHGRIVYIGMPL 147
[14][TOP]
>UniRef100_C5X0M7 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Sorghum
bicolor RepID=C5X0M7_SORBI
Length = 339
Score = 106 bits (264), Expect = 9e-22
Identities = 72/140 (51%), Positives = 87/140 (62%), Gaps = 12/140 (8%)
Frame = +1
Query: 13 VPTSIPTSSSSSNSQQSLPSRRRCRN------LRSFCSVNATRAKIPTPHLNPN-DPFLS 171
+PT P+ ++SS S S P R+ R L + + A A P+P NP DPFLS
Sbjct: 10 LPTPSPSHAASSPSLPS-PLLRQARGGVASSALVARAAGPAGAAGAPSPLFNPRGDPFLS 68
Query: 172 KLASVAASSPEMLL----NRPVNSDTPPYLDIFDSPTLMATPAQVERSVS-YNEHRPRRP 336
LA A+SPE L D P+L+IF + LMA+PAQVERS S Y++HRPRRP
Sbjct: 69 TLA---AASPEDLAAAAGGERRGEDHLPFLEIFQNAKLMASPAQVERSSSSYSQHRPRRP 125
Query: 337 PPDLPSLLLHGRIVYIGMPL 396
PPDLPSLLLHGRIVYIGMPL
Sbjct: 126 PPDLPSLLLHGRIVYIGMPL 145
[15][TOP]
>UniRef100_C0PPU2 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Picea
sitchensis RepID=C0PPU2_PICSI
Length = 327
Score = 104 bits (260), Expect = 3e-21
Identities = 57/91 (62%), Positives = 66/91 (72%), Gaps = 2/91 (2%)
Frame = +1
Query: 130 IPTPHLNPNDPFLSKLASVAASSPEMLLNRPVNSDTPPYLDIFDS--PTLMATPAQVERS 303
IP P NPNDPFLS LA A+ S +P + DTPP LD+ + P LMA AQVER+
Sbjct: 38 IPLPPRNPNDPFLSNLAFTASGSQA----KPRSDDTPPLLDLVANITPRLMAGHAQVERA 93
Query: 304 VSYNEHRPRRPPPDLPSLLLHGRIVYIGMPL 396
SYNEHRPRRPPPDLPSLLL+ RI++IGMPL
Sbjct: 94 -SYNEHRPRRPPPDLPSLLLNSRIIFIGMPL 123
[16][TOP]
>UniRef100_B6T9T4 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Zea mays
RepID=B6T9T4_MAIZE
Length = 339
Score = 103 bits (256), Expect = 8e-21
Identities = 70/137 (51%), Positives = 81/137 (59%), Gaps = 13/137 (9%)
Frame = +1
Query: 25 IPTSSSSSNSQQSLPSRRRCRNLRSFCSVNATRAKIPT-------PHLNPN-DPFLSKLA 180
+PT S +++S PS R S RA PT P NP DPFLS LA
Sbjct: 12 LPTPSHATSSLSFPPSLLRQARGGVASSTLVARAAGPTGAAGAPSPLFNPRGDPFLSTLA 71
Query: 181 SVAASSPEMLL----NRPVNSDTPPYLDIFDSPTLMATPAQVERSVS-YNEHRPRRPPPD 345
A+SPE L D P+L+IF + LMA+PAQVERS S Y++HRPRRPPPD
Sbjct: 72 ---AASPEDLAAAAGGERRGEDHLPFLEIFQNTKLMASPAQVERSSSSYSQHRPRRPPPD 128
Query: 346 LPSLLLHGRIVYIGMPL 396
LPSLLLHGRIVYIGMPL
Sbjct: 129 LPSLLLHGRIVYIGMPL 145
[17][TOP]
>UniRef100_Q01ET1 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ostreococcus
tauri RepID=Q01ET1_OSTTA
Length = 297
Score = 65.1 bits (157), Expect = 2e-09
Identities = 29/45 (64%), Positives = 32/45 (71%)
Frame = +1
Query: 262 SPTLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPL 396
SP +PA SYNEH+P+ PPPDLPSLLL RIVYIGMPL
Sbjct: 61 SPIASTSPASANPGTSYNEHKPKTPPPDLPSLLLDSRIVYIGMPL 105
[18][TOP]
>UniRef100_A4RSQ9 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Ostreococcus
lucimarinus CCE9901 RepID=A4RSQ9_OSTLU
Length = 308
Score = 62.8 bits (151), Expect = 1e-08
Identities = 28/47 (59%), Positives = 33/47 (70%)
Frame = +1
Query: 256 FDSPTLMATPAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPL 396
+ SP +PA SY+EH+P+ PPPDLPSLLL RIVYIGMPL
Sbjct: 70 YASPQASNSPASANPGTSYSEHKPKTPPPDLPSLLLDSRIVYIGMPL 116
[19][TOP]
>UniRef100_C1MKH8 ATP-dependent Clp protease proteolytic subunit n=1 Tax=Micromonas
pusilla CCMP1545 RepID=C1MKH8_9CHLO
Length = 294
Score = 62.4 bits (150), Expect = 2e-08
Identities = 28/39 (71%), Positives = 31/39 (79%)
Frame = +1
Query: 280 TPAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPL 396
+PA S SYNEH+P+ PPPDLPSLLL RIVYIGMPL
Sbjct: 57 SPASATPSSSYNEHKPKTPPPDLPSLLLDSRIVYIGMPL 95
[20][TOP]
>UniRef100_C1FE34 ATP-dependent Clp protease proteolytic subunit (Fragment) n=1
Tax=Micromonas sp. RCC299 RepID=C1FE34_9CHLO
Length = 203
Score = 59.3 bits (142), Expect = 1e-07
Identities = 25/38 (65%), Positives = 29/38 (76%)
Frame = +1
Query: 283 PAQVERSVSYNEHRPRRPPPDLPSLLLHGRIVYIGMPL 396
PA SY+EH+P+ PPPDLPSLLL RI+YIGMPL
Sbjct: 1 PASANPGASYSEHKPKTPPPDLPSLLLDSRIIYIGMPL 38
[21][TOP]
>UniRef100_B1PL59 Chloroplast ClpP protease complex subunit (Fragment) n=2
Tax=Oenothera RepID=B1PL59_OENEH
Length = 75
Score = 53.9 bits (128), Expect = 5e-06
Identities = 36/77 (46%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Frame = +1
Query: 31 TSSSSSNSQQSLPSRRRCRNLRSFCSVNATRAKIPTPHLNPNDPFLSKLASVAASSPEML 210
T +S S S SL +RRR SV AKIP P LNPNDPFLS+L+ VAA P+ L
Sbjct: 8 TMASLSPSAPSLSTRRR--------SVRCA-AKIPMPPLNPNDPFLSRLSRVAAEDPDRL 58
Query: 211 LNRP----VNSDTPPYL 249
RP D+ PY+
Sbjct: 59 FIRPEEEEEGEDSMPYM 75