AV408241 ( MWL038c01_r )

[UP]


[1][TOP]
>UniRef100_B9SHS2 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
           RepID=B9SHS2_RICCO
          Length = 1139

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 37/56 (66%), Positives = 45/56 (80%)
 Frame = +3

Query: 261 VQSNEGSKLSNHSLGDSGIDKQFLTAPIKSAVDKFQLIPEFLKIRGLVKQHLDSFN 428
           +Q++     +  +L +  IDKQ LTAPIKSAVDKFQL+PEFLK+RGLVKQHLDSFN
Sbjct: 4   MQTDSSIGNNEQNLVEQLIDKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFN 59

[2][TOP]
>UniRef100_UPI00005DC295 NRPC2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside
           binding n=1 Tax=Arabidopsis thaliana RepID=UPI00005DC295
          Length = 1161

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = +3

Query: 306 DSGIDKQFLTAPIKSAVDKFQLIPEFLKIRGLVKQHLDSFN 428
           D  IDK+ L+APIKS  DKFQL+PEFLK+RGLVKQHLDSFN
Sbjct: 14  DHFIDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFN 54

[3][TOP]
>UniRef100_Q9FKF1 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana
           RepID=Q9FKF1_ARATH
          Length = 1194

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 32/41 (78%), Positives = 36/41 (87%)
 Frame = +3

Query: 306 DSGIDKQFLTAPIKSAVDKFQLIPEFLKIRGLVKQHLDSFN 428
           D  IDK+ L+APIKS  DKFQL+PEFLK+RGLVKQHLDSFN
Sbjct: 35  DHFIDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFN 75

[4][TOP]
>UniRef100_B9IDF9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa
           RepID=B9IDF9_POPTR
          Length = 1141

 Score = 63.2 bits (152), Expect = 9e-09
 Identities = 33/42 (78%), Positives = 35/42 (83%), Gaps = 1/42 (2%)
 Frame = +3

Query: 306 DSGIDKQ-FLTAPIKSAVDKFQLIPEFLKIRGLVKQHLDSFN 428
           D  IDKQ    AP+KSAVDKFQL+PEFLK RGLVKQHLDSFN
Sbjct: 1   DHLIDKQKHAAAPVKSAVDKFQLLPEFLKGRGLVKQHLDSFN 42

[5][TOP]
>UniRef100_A9RNX6 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
           patens RepID=A9RNX6_PHYPA
          Length = 1135

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 27/36 (75%), Positives = 33/36 (91%)
 Frame = +3

Query: 321 KQFLTAPIKSAVDKFQLIPEFLKIRGLVKQHLDSFN 428
           K+ L AP+K+AVDKFQL+P FLK+RGLVKQH+DSFN
Sbjct: 12  KEGLEAPVKTAVDKFQLLPSFLKVRGLVKQHIDSFN 47

[6][TOP]
>UniRef100_UPI0001985A70 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI0001985A70
          Length = 1142

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = +3

Query: 315 IDKQFLTAPIKSAVDKFQLIPEFLKIRGLVKQHLDSFN 428
           I K F   P+K AVDKF L+PEFLK+RGLVKQHLDSFN
Sbjct: 6   IHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFN 43

[7][TOP]
>UniRef100_A7QMF0 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
           RepID=A7QMF0_VITVI
          Length = 1146

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = +3

Query: 315 IDKQFLTAPIKSAVDKFQLIPEFLKIRGLVKQHLDSFN 428
           I K F   P+K AVDKF L+PEFLK+RGLVKQHLDSFN
Sbjct: 3   IHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFN 40

[8][TOP]
>UniRef100_UPI0000E487B4 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
           polypeptide B n=1 Tax=Strongylocentrotus purpuratus
           RepID=UPI0000E487B4
          Length = 830

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 25/38 (65%), Positives = 34/38 (89%)
 Frame = +3

Query: 315 IDKQFLTAPIKSAVDKFQLIPEFLKIRGLVKQHLDSFN 428
           IDK+ L+APIK+  DK++L+P FLK+RGLV+QH+DSFN
Sbjct: 27  IDKELLSAPIKAVKDKWKLLPAFLKVRGLVRQHIDSFN 64

[9][TOP]
>UniRef100_C1FIF0 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
           RepID=C1FIF0_9CHLO
          Length = 1159

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 24/38 (63%), Positives = 31/38 (81%)
 Frame = +3

Query: 315 IDKQFLTAPIKSAVDKFQLIPEFLKIRGLVKQHLDSFN 428
           +D   L APIK+  DKF+L+P FLK+RGLV+QH+DSFN
Sbjct: 25  VDPATLNAPIKTLKDKFELLPAFLKVRGLVRQHIDSFN 62

[10][TOP]
>UniRef100_A8IY03 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8IY03_CHLRE
          Length = 1161

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 26/37 (70%), Positives = 29/37 (78%)
 Frame = +3

Query: 318 DKQFLTAPIKSAVDKFQLIPEFLKIRGLVKQHLDSFN 428
           D   LT PIK+  DKF L+P FLK+RGLVKQHLDSFN
Sbjct: 17  DPTRLTEPIKTVNDKFALLPAFLKVRGLVKQHLDSFN 53

[11][TOP]
>UniRef100_C5Z6F6 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
           RepID=C5Z6F6_SORBI
          Length = 1137

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 22/33 (66%), Positives = 28/33 (84%)
 Frame = +3

Query: 330 LTAPIKSAVDKFQLIPEFLKIRGLVKQHLDSFN 428
           L AP++  VDKF L+P FLK+RGLVK+H+DSFN
Sbjct: 9   LAAPVRKPVDKFALLPAFLKVRGLVKEHIDSFN 41

[12][TOP]
>UniRef100_A4R1B6 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
           RepID=A4R1B6_MAGGR
          Length = 1158

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 23/33 (69%), Positives = 29/33 (87%)
 Frame = +3

Query: 330 LTAPIKSAVDKFQLIPEFLKIRGLVKQHLDSFN 428
           LT PI +A DK+QL+P FLK++GLVKQH+DSFN
Sbjct: 22  LTDPISTAQDKWQLLPAFLKVKGLVKQHIDSFN 54