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[1][TOP]
>UniRef100_Q5QEB2 Elongation factor Ts n=1 Tax=Chlamydomonas reinhardtii
RepID=Q5QEB2_CHLRE
Length = 1013
Score = 244 bits (624), Expect = 2e-63
Identities = 126/126 (100%), Positives = 126/126 (100%)
Frame = +2
Query: 65 MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLED 244
MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLED
Sbjct: 1 MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLED 60
Query: 245 VKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLS 424
VKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLS
Sbjct: 61 VKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLS 120
Query: 425 VDAEKK 442
VDAEKK
Sbjct: 121 VDAEKK 126
[2][TOP]
>UniRef100_Q5QEB1 Plastid-specific ribosomal protein-7 n=1 Tax=Chlamydomonas
reinhardtii RepID=Q5QEB1_CHLRE
Length = 560
Score = 244 bits (624), Expect = 2e-63
Identities = 126/126 (100%), Positives = 126/126 (100%)
Frame = +2
Query: 65 MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLED 244
MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLED
Sbjct: 1 MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLED 60
Query: 245 VKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLS 424
VKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLS
Sbjct: 61 VKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLS 120
Query: 425 VDAEKK 442
VDAEKK
Sbjct: 121 VDAEKK 126
[3][TOP]
>UniRef100_Q5QEB0 Chloroplast polyprotein of elongation factor Ts n=1
Tax=Chlamydomonas reinhardtii RepID=Q5QEB0_CHLRE
Length = 603
Score = 244 bits (624), Expect = 2e-63
Identities = 126/126 (100%), Positives = 126/126 (100%)
Frame = +2
Query: 65 MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLED 244
MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLED
Sbjct: 1 MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLED 60
Query: 245 VKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLS 424
VKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLS
Sbjct: 61 VKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLS 120
Query: 425 VDAEKK 442
VDAEKK
Sbjct: 121 VDAEKK 126
[4][TOP]
>UniRef100_A8J641 Plastid-specific ribosomal protein 7 n=1 Tax=Chlamydomonas
reinhardtii RepID=A8J641_CHLRE
Length = 560
Score = 244 bits (624), Expect = 2e-63
Identities = 126/126 (100%), Positives = 126/126 (100%)
Frame = +2
Query: 65 MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLED 244
MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLED
Sbjct: 1 MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLED 60
Query: 245 VKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLS 424
VKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLS
Sbjct: 61 VKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLS 120
Query: 425 VDAEKK 442
VDAEKK
Sbjct: 121 VDAEKK 126
[5][TOP]
>UniRef100_A8J639 Polyprotein of PSRP-7 and EF-Ts, splice variant 2 n=1
Tax=Chlamydomonas reinhardtii RepID=A8J639_CHLRE
Length = 603
Score = 244 bits (624), Expect = 2e-63
Identities = 126/126 (100%), Positives = 126/126 (100%)
Frame = +2
Query: 65 MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLED 244
MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLED
Sbjct: 1 MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLED 60
Query: 245 VKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLS 424
VKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLS
Sbjct: 61 VKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLS 120
Query: 425 VDAEKK 442
VDAEKK
Sbjct: 121 VDAEKK 126
[6][TOP]
>UniRef100_A8J637 Elongation factor Ts n=1 Tax=Chlamydomonas reinhardtii
RepID=A8J637_CHLRE
Length = 1013
Score = 244 bits (624), Expect = 2e-63
Identities = 126/126 (100%), Positives = 126/126 (100%)
Frame = +2
Query: 65 MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLED 244
MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLED
Sbjct: 1 MLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLED 60
Query: 245 VKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLS 424
VKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLS
Sbjct: 61 VKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLS 120
Query: 425 VDAEKK 442
VDAEKK
Sbjct: 121 VDAEKK 126
[7][TOP]
>UniRef100_Q2L128 Transcription accessory protein n=1 Tax=Bordetella avium 197N
RepID=Q2L128_BORA1
Length = 790
Score = 79.0 bits (193), Expect = 2e-13
Identities = 57/150 (38%), Positives = 78/150 (52%), Gaps = 15/150 (10%)
Frame = +2
Query: 38 SSIFPSSRRMLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVR---PSVR-VFAEA- 202
S++ P + ++ + A +KA R ++ G FT R P+VR +FAE
Sbjct: 585 SAVHPEAYPVVERI--VARIKADVRQIIGQREALKGVSPADFTDERFGLPTVRDIFAELE 642
Query: 203 -----PAAEQAAKAIK-----LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
P E K L+D+ G EG VT V FGAFV+ G + +GLVHIS L
Sbjct: 643 KPGRDPRPEFKTAQFKEGVETLKDLHPGMLLEGVVTNVANFGAFVDIGVHQDGLVHISAL 702
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
A F K+ +DVV+ GQ VTVKVL VD ++K
Sbjct: 703 AEKFVKDPRDVVRVGQTVTVKVLEVDVQRK 732
[8][TOP]
>UniRef100_A9NHV1 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Acholeplasma laidlawii PG-8A
RepID=A9NHV1_ACHLI
Length = 724
Score = 79.0 bits (193), Expect = 2e-13
Identities = 39/70 (55%), Positives = 51/70 (72%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+ +ED+K G E EGTV V +FGAFV+ G +GLVHISKL++ F K+ KDVV GQ VT
Sbjct: 643 LSIEDLKVGMELEGTVRNVTDFGAFVDVGLKNDGLVHISKLSNKFVKHPKDVVSVGQIVT 702
Query: 410 VKVLSVDAEK 439
V VL++D +K
Sbjct: 703 VWVLNIDRDK 712
[9][TOP]
>UniRef100_UPI0001B44404 hypothetical protein LmonocytFSL_06170 n=1 Tax=Listeria
monocytogenes FSL J2-003 RepID=UPI0001B44404
Length = 725
Score = 78.6 bits (192), Expect = 2e-13
Identities = 44/102 (43%), Positives = 57/102 (55%)
Frame = +2
Query: 134 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 313
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 314 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
G +GLVHISKL++ F KN DVV G VTV V VD +K
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKK 710
[10][TOP]
>UniRef100_UPI0001B43D06 hypothetical protein LmonocytogFSL_06115 n=1 Tax=Listeria
monocytogenes FSL N1-017 RepID=UPI0001B43D06
Length = 725
Score = 78.6 bits (192), Expect = 2e-13
Identities = 44/102 (43%), Positives = 57/102 (55%)
Frame = +2
Query: 134 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 313
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 314 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
G +GLVHISKL++ F KN DVV G VTV V VD +K
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKK 710
[11][TOP]
>UniRef100_UPI0001B43B10 hypothetical protein LmonF_10391 n=1 Tax=Listeria monocytogenes FSL
F2-515 RepID=UPI0001B43B10
Length = 301
Score = 78.6 bits (192), Expect = 2e-13
Identities = 44/102 (43%), Positives = 57/102 (55%)
Frame = +2
Query: 134 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 313
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 185 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 244
Query: 314 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
G +GLVHISKL++ F KN DVV G VTV V VD +K
Sbjct: 245 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKK 286
[12][TOP]
>UniRef100_Q92DB8 Lin0897 protein n=1 Tax=Listeria innocua RepID=Q92DB8_LISIN
Length = 725
Score = 78.6 bits (192), Expect = 2e-13
Identities = 44/102 (43%), Positives = 57/102 (55%)
Frame = +2
Query: 134 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 313
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 314 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
G +GLVHISKL++ F KN DVV G VTV V VD +K
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKK 710
[13][TOP]
>UniRef100_Q8Y8K3 Lmo0898 protein n=2 Tax=Listeria monocytogenes RepID=Q8Y8K3_LISMO
Length = 725
Score = 78.6 bits (192), Expect = 2e-13
Identities = 44/102 (43%), Positives = 57/102 (55%)
Frame = +2
Query: 134 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 313
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 314 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
G +GLVHISKL++ F KN DVV G VTV V VD +K
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKK 710
[14][TOP]
>UniRef100_Q721R8 S1 RNA binding domain protein n=1 Tax=Listeria monocytogenes str.
4b F2365 RepID=Q721R8_LISMF
Length = 725
Score = 78.6 bits (192), Expect = 2e-13
Identities = 44/102 (43%), Positives = 57/102 (55%)
Frame = +2
Query: 134 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 313
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 314 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
G +GLVHISKL++ F KN DVV G VTV V VD +K
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKK 710
[15][TOP]
>UniRef100_A0AH17 Complete genome n=1 Tax=Listeria welshimeri serovar 6b str.
SLCC5334 RepID=A0AH17_LISW6
Length = 725
Score = 78.6 bits (192), Expect = 2e-13
Identities = 44/102 (43%), Positives = 57/102 (55%)
Frame = +2
Query: 134 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 313
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 314 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
G +GLVHISKL++ F KN DVV G VTV V VD +K
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKK 710
[16][TOP]
>UniRef100_Q4EKE0 S1 RNA binding domain protein n=1 Tax=Listeria monocytogenes str.
4b H7858 RepID=Q4EKE0_LISMO
Length = 725
Score = 78.6 bits (192), Expect = 2e-13
Identities = 44/102 (43%), Positives = 57/102 (55%)
Frame = +2
Query: 134 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 313
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 314 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
G +GLVHISKL++ F KN DVV G VTV V VD +K
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKK 710
[17][TOP]
>UniRef100_C8KAD9 S1 RNA binding domain-containing protein n=2 Tax=Listeria
monocytogenes RepID=C8KAD9_LISMO
Length = 725
Score = 78.6 bits (192), Expect = 2e-13
Identities = 44/102 (43%), Positives = 57/102 (55%)
Frame = +2
Query: 134 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 313
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 314 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
G +GLVHISKL++ F KN DVV G VTV V VD +K
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKK 710
[18][TOP]
>UniRef100_C8K102 S1 RNA-binding domain-containing protein n=2 Tax=Listeria
monocytogenes RepID=C8K102_LISMO
Length = 725
Score = 78.6 bits (192), Expect = 2e-13
Identities = 44/102 (43%), Positives = 57/102 (55%)
Frame = +2
Query: 134 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 313
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 314 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
G +GLVHISKL++ F KN DVV G VTV V VD +K
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKK 710
[19][TOP]
>UniRef100_C8JTR8 S1 RNA binding domain-containing protein n=1 Tax=Listeria
monocytogenes FSL N3-165 RepID=C8JTR8_LISMO
Length = 725
Score = 78.6 bits (192), Expect = 2e-13
Identities = 44/102 (43%), Positives = 57/102 (55%)
Frame = +2
Query: 134 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 313
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 314 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
G +GLVHISKL++ F KN DVV G VTV V VD +K
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKK 710
[20][TOP]
>UniRef100_UPI0001B41F87 hypothetical protein LmonL_19961 n=1 Tax=Listeria monocytogenes
LO28 RepID=UPI0001B41F87
Length = 105
Score = 78.2 bits (191), Expect = 3e-13
Identities = 41/81 (50%), Positives = 51/81 (62%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E PA I +ED+K+G E +GTV V +FGAFV+ G +GLVHISKL++ F KN
Sbjct: 10 ELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNSFVKNP 69
Query: 377 KDVVQPGQKVTVKVLSVDAEK 439
DVV G VTV V VD +K
Sbjct: 70 MDVVSVGDVVTVWVDEVDTKK 90
[21][TOP]
>UniRef100_B8DG61 Putative uncharacterized protein n=1 Tax=Listeria monocytogenes
HCC23 RepID=B8DG61_LISMH
Length = 725
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/102 (43%), Positives = 57/102 (55%)
Frame = +2
Query: 134 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 313
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 314 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
G +GLVHISKL++ F KN DVV G VTV V VD +K
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDIVTVWVDEVDTKK 710
[22][TOP]
>UniRef100_A6VTC2 RNA binding S1 domain protein n=1 Tax=Marinomonas sp. MWYL1
RepID=A6VTC2_MARMS
Length = 720
Score = 77.8 bits (190), Expect = 3e-13
Identities = 38/70 (54%), Positives = 50/70 (71%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
KLEDV+EG EG VT V FGAFV+ G + +GL+HIS+LA F K+ +D+V+ GQ V V
Sbjct: 642 KLEDVQEGMTLEGVVTNVAAFGAFVDLGVHQDGLIHISQLADRFVKDPRDLVRVGQVVKV 701
Query: 413 KVLSVDAEKK 442
VL VD ++K
Sbjct: 702 TVLEVDVQRK 711
[23][TOP]
>UniRef100_C1N2E8 Elongation factor Ts n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N2E8_9CHLO
Length = 844
Score = 77.8 bits (190), Expect = 3e-13
Identities = 44/104 (42%), Positives = 59/104 (56%), Gaps = 6/104 (5%)
Frame = +2
Query: 146 RRQVAFTGVRPSVRVFAEAPAAEQAAKAIKL------EDVKEGSEYEGTVTTVEEFGAFV 307
RR VA V V E P + +K E V G+E++G V V+E+G FV
Sbjct: 29 RRAVALRATVAEVEVSEEKPKPKGKKPFVKKNVTVTDEQVVVGAEFKGVVKRVQEYGCFV 88
Query: 308 NFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
+FGA ++GLVHIS+L GF +N DVV Q+V V + S+DAEK
Sbjct: 89 DFGAKSDGLVHISELKDGFVENVADVVSENQEVQVFIKSIDAEK 132
Score = 62.4 bits (150), Expect = 2e-08
Identities = 29/82 (35%), Positives = 51/82 (62%)
Frame = +2
Query: 194 AEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKN 373
A+ A+E++ KA++ +K+G+ EG V +++ FGAFV GLVH+++++ +
Sbjct: 167 AKKAASEESMKAVRA--IKKGTTVEGVVKSIQAFGAFVEIAEGVEGLVHVTEMSEDYNVK 224
Query: 374 AKDVVQPGQKVTVKVLSVDAEK 439
+D V G+ V V+VL VD +K
Sbjct: 225 PEDFVTVGETVKVRVLGVDGQK 246
[24][TOP]
>UniRef100_A1VC50 RNA binding S1 domain protein n=1 Tax=Desulfovibrio vulgaris DP4
RepID=A1VC50_DESVV
Length = 723
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/90 (44%), Positives = 58/90 (64%)
Frame = +2
Query: 173 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
RP+ VFA A K++DV+ G E G VT V +FGAFV+ G + +GLVH+S+L
Sbjct: 627 RPAFEVFAFAEGVN------KVDDVQPGMELPGIVTNVTKFGAFVDIGVHRDGLVHVSQL 680
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
A F ++ +VV PG+KV V+VL VD +++
Sbjct: 681 ADRFVRDPAEVVAPGRKVRVRVLDVDRQRE 710
[25][TOP]
>UniRef100_Q729V2 S1 RNA binding domain protein n=2 Tax=Desulfovibrio vulgaris
RepID=Q729V2_DESVH
Length = 723
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/90 (44%), Positives = 58/90 (64%)
Frame = +2
Query: 173 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
RP+ VFA A K++DV+ G E G VT V +FGAFV+ G + +GLVH+S+L
Sbjct: 627 RPAFEVFAFAEGVN------KVDDVQPGMELPGIVTNVTKFGAFVDIGVHRDGLVHVSQL 680
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
A F ++ +VV PG+KV V+VL VD +++
Sbjct: 681 ADRFVRDPAEVVAPGRKVRVRVLDVDRQRE 710
[26][TOP]
>UniRef100_A9U7P4 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U7P4_PHYPA
Length = 398
Score = 77.0 bits (188), Expect = 6e-13
Identities = 41/89 (46%), Positives = 55/89 (61%)
Frame = +2
Query: 173 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
RP E P +K+ED+ G E +GTV V +FGAFV+ G ++GLVHIS+L
Sbjct: 296 RPGRDPREELPLPIFRTDVLKIEDLTPGMELQGTVRNVIDFGAFVDIGIKSDGLVHISQL 355
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
+SG+ K+ DVV G VTV VL+VD +K
Sbjct: 356 SSGYVKHPMDVVSVGDNVTVWVLNVDLKK 384
[27][TOP]
>UniRef100_UPI0001851521 transcription accessory protein n=1 Tax=Bacillus coahuilensis m4-4
RepID=UPI0001851521
Length = 723
Score = 76.6 bits (187), Expect = 8e-13
Identities = 40/70 (57%), Positives = 48/70 (68%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+ G E +GTV V +FGAFV+ G +GLVHISKL GF K+ DVV GQ VT
Sbjct: 640 LKLEDLAVGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLKKGFVKHPLDVVSVGQVVT 699
Query: 410 VKVLSVDAEK 439
V V SVD +K
Sbjct: 700 VWVDSVDVQK 709
[28][TOP]
>UniRef100_UPI00018506B3 transcription accessory protein n=1 Tax=Bacillus coahuilensis m4-4
RepID=UPI00018506B3
Length = 727
Score = 76.6 bits (187), Expect = 8e-13
Identities = 40/70 (57%), Positives = 48/70 (68%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+ G E +GTV V +FGAFV+ G +GLVHISKL GF K+ DVV GQ VT
Sbjct: 644 LKLEDLAVGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLKKGFVKHPLDVVSVGQVVT 703
Query: 410 VKVLSVDAEK 439
V V SVD +K
Sbjct: 704 VWVDSVDVQK 713
[29][TOP]
>UniRef100_A1APM8 RNA binding S1 domain protein n=1 Tax=Pelobacter propionicus DSM
2379 RepID=A1APM8_PELPD
Length = 723
Score = 76.6 bits (187), Expect = 8e-13
Identities = 38/70 (54%), Positives = 49/70 (70%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
K+ED++EG +G VT V FGAFV+ G + +GLVHIS LA+ F K+ D VQ GQ V V
Sbjct: 642 KIEDLREGMVLQGVVTNVTAFGAFVDIGVHQDGLVHISHLANRFVKSPHDAVQAGQLVRV 701
Query: 413 KVLSVDAEKK 442
KVLS D ++K
Sbjct: 702 KVLSADPKRK 711
[30][TOP]
>UniRef100_A8W0E6 Stage II sporulation E family protein n=1 Tax=Bacillus
selenitireducens MLS10 RepID=A8W0E6_9BACI
Length = 724
Score = 76.6 bits (187), Expect = 8e-13
Identities = 38/70 (54%), Positives = 48/70 (68%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+++ED+++G E EGTV V +FGAFV+ G +GLVH+SKL GF KN DVV G VT
Sbjct: 643 LQMEDLEKGMELEGTVRNVVDFGAFVDIGVKQDGLVHVSKLRKGFVKNPMDVVNVGDVVT 702
Query: 410 VKVLSVDAEK 439
V V SVD K
Sbjct: 703 VWVDSVDVHK 712
[31][TOP]
>UniRef100_Q65N46 Putative RNA binding protein containing S1 RNA binding domain,YdcI
n=1 Tax=Bacillus licheniformis ATCC 14580
RepID=Q65N46_BACLD
Length = 720
Score = 76.3 bits (186), Expect = 1e-12
Identities = 41/81 (50%), Positives = 50/81 (61%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E P ++LED+KEG E +GTV V +FGAFV+ G +GLVHISKL+ F K+
Sbjct: 629 EVPKPLLKTDVLQLEDLKEGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSHSFVKHP 688
Query: 377 KDVVQPGQKVTVKVLSVDAEK 439
DVV G VTV V VDA K
Sbjct: 689 LDVVSVGDIVTVWVEDVDAAK 709
[32][TOP]
>UniRef100_A6CTJ1 YdcI n=1 Tax=Bacillus sp. SG-1 RepID=A6CTJ1_9BACI
Length = 717
Score = 76.3 bits (186), Expect = 1e-12
Identities = 43/90 (47%), Positives = 53/90 (58%)
Frame = +2
Query: 170 VRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISK 349
VRP + E A +KLED++ G E +GTV V +FGAFV+ G +GLVHISK
Sbjct: 618 VRPGRDLRDELSAPLLKKDVLKLEDLQPGMELQGTVRNVVDFGAFVDIGVKQDGLVHISK 677
Query: 350 LASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
L GF K+ DVV G VTV V S D +K
Sbjct: 678 LRKGFVKHPLDVVSVGDVVTVWVESADVKK 707
[33][TOP]
>UniRef100_UPI0001788115 Tex-like protein protein-like protein n=1 Tax=Geobacillus sp.
Y412MC10 RepID=UPI0001788115
Length = 740
Score = 75.9 bits (185), Expect = 1e-12
Identities = 41/89 (46%), Positives = 54/89 (60%)
Frame = +2
Query: 173 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
RP E P +K+ED+ G E +GTV V +FGAFV+ G ++GLVHIS+L
Sbjct: 636 RPGRDPREELPLPIFRQDVLKIEDLVPGMELQGTVRNVIDFGAFVDIGIKSDGLVHISQL 695
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
+ GF K+ DVV G VTV VL+VD +K
Sbjct: 696 SDGFVKHPMDVVSVGDNVTVWVLNVDLKK 724
[34][TOP]
>UniRef100_UPI00005DC0B2 emb2726 (embryo defective 2726); RNA binding / translation
elongation factor n=1 Tax=Arabidopsis thaliana
RepID=UPI00005DC0B2
Length = 709
Score = 75.9 bits (185), Expect = 1e-12
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 25/164 (15%)
Frame = +2
Query: 26 RSLNSSIFPSSRRMLRELGRTATV-KAHGRS-VLRPVRGPAGRRQVAFTGVRPSVRVFAE 199
R I S++R++ L + + HGR VL P R G VA + S V AE
Sbjct: 35 RKAGKQILSSTQRLVLPLSTSLRLFPTHGRQFVLHPHRRATGTDVVAAVEEQDSTPVVAE 94
Query: 200 -----------APAAEQAAK------------AIKLEDVKEGSEYEGTVTTVEEFGAFVN 310
APA ++ A+K E++ G+ + G V ++ FGAFV+
Sbjct: 95 DKETVASEKSDAPAPTSQSRGTARPGRKSEMPAVKNEELVPGATFTGKVRAIQPFGAFVD 154
Query: 311 FGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
FGA T+GLVH+S+L+ F K+ VV GQ+V V+++ D E K
Sbjct: 155 FGAFTDGLVHVSQLSDNFVKDVSSVVTIGQEVKVRLVEADIESK 198
[35][TOP]
>UniRef100_Q7WGI8 Transcription accessory protein n=1 Tax=Bordetella bronchiseptica
RepID=Q7WGI8_BORBR
Length = 791
Score = 75.9 bits (185), Expect = 1e-12
Identities = 57/150 (38%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Frame = +2
Query: 38 SSIFPSSRRMLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVR---PSVR-VFAEA- 202
S++ P + ++ + A +KA R ++ G FT R P+VR +FAE
Sbjct: 585 SAVHPEAYPVVERI--VARIKADVRHIIGQREALKGVSPSDFTDERFGLPTVRDIFAELE 642
Query: 203 -----PAAEQAAKAIK-----LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
P E K L D+ G EG VT V FGAFV+ G + +GLVHIS L
Sbjct: 643 KPGRDPRPEFKTAQFKEGVETLNDLFPGMVLEGVVTNVANFGAFVDIGVHQDGLVHISAL 702
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
A F K+ +DVV+ GQ VTVKVL VD +K
Sbjct: 703 AEKFVKDPRDVVRVGQTVTVKVLEVDVARK 732
[36][TOP]
>UniRef100_Q7W5T7 Transcription accessory protein n=1 Tax=Bordetella parapertussis
RepID=Q7W5T7_BORPA
Length = 791
Score = 75.9 bits (185), Expect = 1e-12
Identities = 57/150 (38%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Frame = +2
Query: 38 SSIFPSSRRMLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVR---PSVR-VFAEA- 202
S++ P + ++ + A +KA R ++ G FT R P+VR +FAE
Sbjct: 585 SAVHPEAYPVVERI--VARIKADVRHIIGQREALKGVSPSDFTDERFGLPTVRDIFAELE 642
Query: 203 -----PAAEQAAKAIK-----LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
P E K L D+ G EG VT V FGAFV+ G + +GLVHIS L
Sbjct: 643 KPGRDPRPEFKTAQFKEGVETLNDLFPGMVLEGVVTNVANFGAFVDIGVHQDGLVHISAL 702
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
A F K+ +DVV+ GQ VTVKVL VD +K
Sbjct: 703 AEKFVKDPRDVVRVGQTVTVKVLEVDVARK 732
[37][TOP]
>UniRef100_A9IIW4 Transcription accessory protein n=1 Tax=Bordetella petrii DSM 12804
RepID=A9IIW4_BORPD
Length = 791
Score = 75.9 bits (185), Expect = 1e-12
Identities = 56/150 (37%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Frame = +2
Query: 38 SSIFPSSRRMLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVR---PSVR-VFAEA- 202
S++ P + ++ + A +KA + ++ G FT R P+VR +FAE
Sbjct: 585 SAVHPEAYPVVERI--VAKIKADVQQIIGQREALKGVSPADFTDERFGLPTVRDIFAELE 642
Query: 203 -----PAAEQAAKAIK-----LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
P E K L D+ G EG VT V FGAFV+ G + +GLVHIS L
Sbjct: 643 KPGRDPRPEFKTAQFKDGVETLNDLYPGMVLEGVVTNVANFGAFVDIGVHQDGLVHISAL 702
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
A F K+ +DVV+ GQ VTVKVL VD +K
Sbjct: 703 AEKFVKDPRDVVRVGQTVTVKVLEVDVARK 732
[38][TOP]
>UniRef100_A8FA76 RNA binding transcriptional accessory protein n=1 Tax=Bacillus
pumilus SAFR-032 RepID=A8FA76_BACP2
Length = 719
Score = 75.9 bits (185), Expect = 1e-12
Identities = 41/81 (50%), Positives = 51/81 (62%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E P +KLED+K+G E +GTV V +FGAFV+ G +GLVHISKL++ F K+
Sbjct: 628 EVPKPLLKTDVLKLEDLKQGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNRFVKHP 687
Query: 377 KDVVQPGQKVTVKVLSVDAEK 439
DVV G VTV V SVD K
Sbjct: 688 LDVVSVGDIVTVWVDSVDQAK 708
[39][TOP]
>UniRef100_Q2BJK7 Conserved protein with nucleic acid-binding protein-like domain
(Transcriptional accessory protein) n=1
Tax=Neptuniibacter caesariensis RepID=Q2BJK7_9GAMM
Length = 714
Score = 75.9 bits (185), Expect = 1e-12
Identities = 36/69 (52%), Positives = 50/69 (72%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
+ D++ G EGT++ V FGAFV+ G + +GLVHIS+LA+ F K+ DVV PGQ VTV+
Sbjct: 636 ITDLQVGMRLEGTISNVTNFGAFVDLGVHQDGLVHISQLANKFVKDPHDVVSPGQIVTVR 695
Query: 416 VLSVDAEKK 442
VL VD ++K
Sbjct: 696 VLEVDEKRK 704
[40][TOP]
>UniRef100_B4AIJ4 Protein YhgF n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AIJ4_BACPU
Length = 719
Score = 75.9 bits (185), Expect = 1e-12
Identities = 41/81 (50%), Positives = 51/81 (62%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E P +KLED+K+G E +GTV V +FGAFV+ G +GLVHISKL++ F K+
Sbjct: 628 EVPKPLLKTDVLKLEDLKQGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNRFVKHP 687
Query: 377 KDVVQPGQKVTVKVLSVDAEK 439
DVV G VTV V SVD K
Sbjct: 688 LDVVSVGDIVTVWVDSVDQAK 708
[41][TOP]
>UniRef100_Q9SZD6 Elongation factor Ts n=1 Tax=Arabidopsis thaliana
RepID=Q9SZD6_ARATH
Length = 953
Score = 75.9 bits (185), Expect = 1e-12
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 25/164 (15%)
Frame = +2
Query: 26 RSLNSSIFPSSRRMLRELGRTATV-KAHGRS-VLRPVRGPAGRRQVAFTGVRPSVRVFAE 199
R I S++R++ L + + HGR VL P R G VA + S V AE
Sbjct: 35 RKAGKQILSSTQRLVLPLSTSLRLFPTHGRQFVLHPHRRATGTDVVAAVEEQDSTPVVAE 94
Query: 200 -----------APAAEQAAK------------AIKLEDVKEGSEYEGTVTTVEEFGAFVN 310
APA ++ A+K E++ G+ + G V ++ FGAFV+
Sbjct: 95 DKETVASEKSDAPAPTSQSRGTARPGRKSEMPAVKNEELVPGATFTGKVRAIQPFGAFVD 154
Query: 311 FGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
FGA T+GLVH+S+L+ F K+ VV GQ+V V+++ D E K
Sbjct: 155 FGAFTDGLVHVSQLSDNFVKDVSSVVTIGQEVKVRLVEADIESK 198
[42][TOP]
>UniRef100_Q93ZG6 AT4g29060/F19B15_90 n=1 Tax=Arabidopsis thaliana RepID=Q93ZG6_ARATH
Length = 455
Score = 75.9 bits (185), Expect = 1e-12
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 25/164 (15%)
Frame = +2
Query: 26 RSLNSSIFPSSRRMLRELGRTATV-KAHGRS-VLRPVRGPAGRRQVAFTGVRPSVRVFAE 199
R I S++R++ L + + HGR VL P R G VA + S V AE
Sbjct: 35 RKAGKQILSSTQRLVLPLSTSLRLFPTHGRQFVLHPHRRATGTDVVAAVEEQDSTPVVAE 94
Query: 200 -----------APAAEQAAK------------AIKLEDVKEGSEYEGTVTTVEEFGAFVN 310
APA ++ A+K E++ G+ + G V ++ FGAFV+
Sbjct: 95 DKETVASEKSDAPAPTSQSRGTARPGRKSEMPAVKNEELVPGATFTGKVRAIQPFGAFVD 154
Query: 311 FGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
FGA T+GLVH+S+L+ F K+ VV GQ+V V+++ D E K
Sbjct: 155 FGAFTDGLVHVSQLSDNFVKDVSSVVTIGQEVKVRLVEADIESK 198
[43][TOP]
>UniRef100_Q5QEA9 Elongation factor Ts n=1 Tax=Arabidopsis thaliana
RepID=Q5QEA9_ARATH
Length = 710
Score = 75.9 bits (185), Expect = 1e-12
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 25/164 (15%)
Frame = +2
Query: 26 RSLNSSIFPSSRRMLRELGRTATV-KAHGRS-VLRPVRGPAGRRQVAFTGVRPSVRVFAE 199
R I S++R++ L + + HGR VL P R G VA + S V AE
Sbjct: 35 RKAGKQILSSTQRLVLPLSTSLRLFPTHGRQFVLHPHRRATGTDVVAAVEEQDSTPVVAE 94
Query: 200 -----------APAAEQAAK------------AIKLEDVKEGSEYEGTVTTVEEFGAFVN 310
APA ++ A+K E++ G+ + G V ++ FGAFV+
Sbjct: 95 DKETVASEKSDAPAPTSQSRGTARPGRKSEMPAVKNEELVPGATFTGKVRAIQPFGAFVD 154
Query: 311 FGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
FGA T+GLVH+S+L+ F K+ VV GQ+V V+++ D E K
Sbjct: 155 FGAFTDGLVHVSQLSDNFVKDVSSVVTIGQEVKVRLVEADIESK 198
[44][TOP]
>UniRef100_Q0WVD2 Elongation factor Ts (Fragment) n=1 Tax=Arabidopsis thaliana
RepID=Q0WVD2_ARATH
Length = 631
Score = 75.9 bits (185), Expect = 1e-12
Identities = 54/164 (32%), Positives = 80/164 (48%), Gaps = 25/164 (15%)
Frame = +2
Query: 26 RSLNSSIFPSSRRMLRELGRTATV-KAHGRS-VLRPVRGPAGRRQVAFTGVRPSVRVFAE 199
R I S++R++ L + + HGR VL P R G VA + S V AE
Sbjct: 35 RKAGKQILSSTQRLVLPLSTSLRLFPTHGRQFVLHPHRRATGTDVVAAVEEQDSTPVVAE 94
Query: 200 -----------APAAEQAAK------------AIKLEDVKEGSEYEGTVTTVEEFGAFVN 310
APA ++ A+K E++ G+ + G V ++ FGAFV+
Sbjct: 95 DKETVASEKSDAPAPTSQSRGTARPGRKSEMPAVKNEELVPGATFTGKVRAIQPFGAFVD 154
Query: 311 FGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
FGA T+GLVH+S+L+ F K+ VV GQ+V V+++ D E K
Sbjct: 155 FGAFTDGLVHVSQLSDNFVKDVSSVVTIGQEVKVRLVEADIESK 198
[45][TOP]
>UniRef100_Q45388 Protein tex n=1 Tax=Bordetella pertussis RepID=TEX_BORPE
Length = 791
Score = 75.9 bits (185), Expect = 1e-12
Identities = 57/150 (38%), Positives = 76/150 (50%), Gaps = 15/150 (10%)
Frame = +2
Query: 38 SSIFPSSRRMLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVR---PSVR-VFAEA- 202
S++ P + ++ + A +KA R ++ G FT R P+VR +FAE
Sbjct: 585 SAVHPEAYPVVERI--VARIKADVRHIIGQREALKGVSPSDFTDERFGLPTVRDIFAELE 642
Query: 203 -----PAAEQAAKAIK-----LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
P E K L D+ G EG VT V FGAFV+ G + +GLVHIS L
Sbjct: 643 KPGRDPRPEFKTAQFKEGVETLNDLFPGMVLEGVVTNVANFGAFVDIGVHQDGLVHISAL 702
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
A F K+ +DVV+ GQ VTVKVL VD +K
Sbjct: 703 AEKFVKDPRDVVRVGQTVTVKVLEVDVARK 732
[46][TOP]
>UniRef100_A0LE14 Polyribonucleotide nucleotidyltransferase n=1 Tax=Magnetococcus sp.
MC-1 RepID=PNP_MAGSM
Length = 701
Score = 75.9 bits (185), Expect = 1e-12
Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Frame = +2
Query: 194 AEAPAAEQAAKAIK--LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFT 367
++ +AEQA K IK + +V++G YEG V + +FGAFVN N +GLVHIS+LA+
Sbjct: 603 SDQASAEQAVKIIKSIVAEVEKGQVYEGKVVRITDFGAFVNILPNKDGLVHISQLANRRV 662
Query: 368 KNAKDVVQPGQKVTVKVLSVDAE 436
+N DVV+ G VTVKVL VD +
Sbjct: 663 QNVTDVVKEGDVVTVKVLDVDRQ 685
[47][TOP]
>UniRef100_Q03E21 Transcriptional accessory protein n=1 Tax=Pediococcus pentosaceus
ATCC 25745 RepID=Q03E21_PEDPA
Length = 722
Score = 75.5 bits (184), Expect = 2e-12
Identities = 41/81 (50%), Positives = 49/81 (60%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E PA + + LED+K G E +GTV V +FGAFV+ G +GLVHISKL GF K
Sbjct: 631 EMPAPLLRSDVLTLEDLKPGMELQGTVRNVIDFGAFVDIGVKQDGLVHISKLKKGFVKQP 690
Query: 377 KDVVQPGQKVTVKVLSVDAEK 439
DVV G V V V SVD E+
Sbjct: 691 SDVVAVGDIVKVWVESVDVER 711
[48][TOP]
>UniRef100_A7Z1N2 YdcI n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7Z1N2_BACA2
Length = 719
Score = 75.5 bits (184), Expect = 2e-12
Identities = 40/81 (49%), Positives = 51/81 (62%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E P ++LED+KEG E +GTV V +FGAFV+ G +GLVHISKL++ F K+
Sbjct: 630 EVPKPLLKKDVLQLEDLKEGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNQFVKHP 689
Query: 377 KDVVQPGQKVTVKVLSVDAEK 439
DVV G VTV V VD +K
Sbjct: 690 LDVVSVGDIVTVWVEGVDVQK 710
[49][TOP]
>UniRef100_C6J5S2 RNA binding S1 domain-containing protein n=1 Tax=Paenibacillus sp.
oral taxon 786 str. D14 RepID=C6J5S2_9BACL
Length = 743
Score = 75.5 bits (184), Expect = 2e-12
Identities = 40/89 (44%), Positives = 54/89 (60%)
Frame = +2
Query: 173 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
RP E P +K+ED+ G E +GTV V +FGAFV+ G +GLVHIS+L
Sbjct: 640 RPGRDPREELPPPIFRTDVLKIEDLVPGMELQGTVRNVIDFGAFVDIGIKNDGLVHISQL 699
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
++G+ K+ DVV G VTV VL+VD +K
Sbjct: 700 SNGYVKHPMDVVSVGDNVTVWVLNVDVKK 728
[50][TOP]
>UniRef100_C2KZ93 S1 domain RNA-binding protein n=1 Tax=Oribacterium sinus F0268
RepID=C2KZ93_9FIRM
Length = 753
Score = 75.5 bits (184), Expect = 2e-12
Identities = 40/82 (48%), Positives = 53/82 (64%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
+ PA ++LED+KEG +GTV V +FGAFV+ G + +GLVHIS L+ F K+
Sbjct: 662 DVPAPILREDVLELEDLKEGMVLQGTVRNVIDFGAFVDIGVHQDGLVHISALSKKFVKHP 721
Query: 377 KDVVQPGQKVTVKVLSVDAEKK 442
DVV+ G V VKVLSVD +K
Sbjct: 722 LDVVKLGDIVKVKVLSVDVARK 743
[51][TOP]
>UniRef100_C1P9H9 RNA binding S1 domain protein n=1 Tax=Bacillus coagulans 36D1
RepID=C1P9H9_BACCO
Length = 725
Score = 75.5 bits (184), Expect = 2e-12
Identities = 38/70 (54%), Positives = 48/70 (68%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E +GTV V +FGAFV+ G +GLVHISKL+ GF K+ D+V G VT
Sbjct: 645 MKLEDLKPGMEMQGTVRNVVDFGAFVDVGVKEDGLVHISKLSKGFVKHPLDIVSVGDIVT 704
Query: 410 VKVLSVDAEK 439
V V VD +K
Sbjct: 705 VWVEKVDVQK 714
[52][TOP]
>UniRef100_A5ZAL1 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum
ATCC 27560 RepID=A5ZAL1_9FIRM
Length = 711
Score = 75.5 bits (184), Expect = 2e-12
Identities = 38/82 (46%), Positives = 54/82 (65%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E P + + +D+KEG E +GTV V +FGAFV+ G + +GLVHIS++++ F K+
Sbjct: 622 EMPKPVLKSDVLDFDDLKEGMELKGTVRNVIDFGAFVDIGVHQDGLVHISEMSNKFIKHP 681
Query: 377 KDVVQPGQKVTVKVLSVDAEKK 442
DVV G V V+VLSVD E+K
Sbjct: 682 LDVVSVGDVVDVRVLSVDKERK 703
[53][TOP]
>UniRef100_A4A335 S1 RNA binding domain protein n=1 Tax=Congregibacter litoralis KT71
RepID=A4A335_9GAMM
Length = 792
Score = 75.5 bits (184), Expect = 2e-12
Identities = 39/82 (47%), Positives = 52/82 (63%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E A+ A K+ D+K EGTVT V FGAFV+ G + +GLVHIS +A F K+
Sbjct: 632 EFKTAKLQAGVEKITDLKPDMVLEGTVTNVTSFGAFVDVGVHQDGLVHISAMAEKFVKDP 691
Query: 377 KDVVQPGQKVTVKVLSVDAEKK 442
+DV + G VTVKV+S+D E+K
Sbjct: 692 RDVAKAGDIVTVKVMSIDVERK 713
[54][TOP]
>UniRef100_C5T4L5 RNA binding S1 domain protein n=1 Tax=Acidovorax delafieldii 2AN
RepID=C5T4L5_ACIDE
Length = 789
Score = 75.1 bits (183), Expect = 2e-12
Identities = 35/69 (50%), Positives = 51/69 (73%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
++D+KEG EGTV+ V +FGAFV+ G + +GLVH+S+LA F +A++VV+ G V VK
Sbjct: 658 IKDLKEGMVLEGTVSNVAQFGAFVDLGVHQDGLVHVSQLAHKFVNDAREVVKTGDIVKVK 717
Query: 416 VLSVDAEKK 442
V+ VD E+K
Sbjct: 718 VMEVDVERK 726
[55][TOP]
>UniRef100_B7X315 RNA binding S1 domain protein n=1 Tax=Comamonas testosteroni KF-1
RepID=B7X315_COMTE
Length = 793
Score = 75.1 bits (183), Expect = 2e-12
Identities = 34/69 (49%), Positives = 53/69 (76%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
++D+KEG EGTV+ V +FGAFV+ G + +GLVH+S+++ F ++A++VV+ GQ V VK
Sbjct: 658 IKDLKEGMTLEGTVSNVAQFGAFVDLGVHQDGLVHVSQMSHKFIEDAREVVKTGQIVKVK 717
Query: 416 VLSVDAEKK 442
VL VD ++K
Sbjct: 718 VLEVDVDRK 726
[56][TOP]
>UniRef100_UPI000196798C hypothetical protein SUBVAR_02860 n=1 Tax=Subdoligranulum variabile
DSM 15176 RepID=UPI000196798C
Length = 719
Score = 74.7 bits (182), Expect = 3e-12
Identities = 46/120 (38%), Positives = 64/120 (53%), Gaps = 2/120 (1%)
Frame = +2
Query: 89 ATVKAHGRSVLRPVRGPAGR--RQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSE 262
A VKA G L G + +P V P + + LED+K G E
Sbjct: 591 AAVKAKGEKTLCETLGVGAPTLHDIVSELCKPGRDVRDSLPKPLLRSDVMSLEDLKPGME 650
Query: 263 YEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
GTV V +FGAFV+ G + +GLVHIS++++ F K+ ++V++ G V VKVLSVD KK
Sbjct: 651 LTGTVRNVIDFGAFVDLGVHQDGLVHISQISNRFIKHPREVLKVGDIVKVKVLSVDVAKK 710
[57][TOP]
>UniRef100_Q5YS43 Putative RNA-binding protein n=1 Tax=Nocardia farcinica
RepID=Q5YS43_NOCFA
Length = 783
Score = 74.7 bits (182), Expect = 3e-12
Identities = 53/149 (35%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Frame = +2
Query: 29 SLNSSIFPSSRRMLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGV-----------R 175
+++ +P RR+L GR VLR +R PA F GV +
Sbjct: 563 AVHPEAYPVVRRILEATGRRVDELIGNTGVLRSLR-PAEFTDEKF-GVPTVTDIIGELEK 620
Query: 176 PSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLA 355
P E AE AA K+ D+K G EG VT V FGAFV+ G + +GLVH+S ++
Sbjct: 621 PGRDPRPEFKTAEFAAGVEKVADLKPGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMS 680
Query: 356 SGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
F K+ ++VV+ G V VKVL VD ++
Sbjct: 681 HSFVKDPREVVKSGDVVKVKVLEVDVARQ 709
[58][TOP]
>UniRef100_B8I5S2 RNA binding S1 domain protein n=1 Tax=Clostridium cellulolyticum
H10 RepID=B8I5S2_CLOCE
Length = 718
Score = 74.7 bits (182), Expect = 3e-12
Identities = 38/82 (46%), Positives = 51/82 (62%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E P + + +ED+K+G GTV V +FGAFV+ G + +GLVHIS+LA + KN
Sbjct: 627 ELPKPMLHSDVLHMEDLKQGMILTGTVRNVADFGAFVDIGVHQDGLVHISQLADKYVKNP 686
Query: 377 KDVVQPGQKVTVKVLSVDAEKK 442
DVV G V VK+L VD E+K
Sbjct: 687 MDVVAVGDIVKVKILEVDVERK 708
[59][TOP]
>UniRef100_C7ICV4 RNA binding S1 domain protein n=1 Tax=Clostridium papyrosolvens DSM
2782 RepID=C7ICV4_9CLOT
Length = 718
Score = 74.7 bits (182), Expect = 3e-12
Identities = 39/82 (47%), Positives = 50/82 (60%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E P + + +ED+K G GTV V +FGAFV+ G + +GLVHIS+LA F KN
Sbjct: 627 ELPKPMLHSDVLNMEDLKAGMILTGTVRNVADFGAFVDIGVHQDGLVHISQLADKFVKNP 686
Query: 377 KDVVQPGQKVTVKVLSVDAEKK 442
DVV G V VKV+ VD E+K
Sbjct: 687 MDVVAVGDIVKVKVIEVDVERK 708
[60][TOP]
>UniRef100_UPI0001B4CC56 transcription accessory protein n=1 Tax=Streptomyces griseoflavus
Tu4000 RepID=UPI0001B4CC56
Length = 742
Score = 74.3 bits (181), Expect = 4e-12
Identities = 49/147 (33%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Frame = +2
Query: 29 SLNSSIFPSSRRMLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPA 208
S++ +P RRM+ G +VLR +R P + + E P
Sbjct: 569 SVHPEAYPVVRRMVASSGAEVAALIGNTAVLRSLRAPDFVDETFGLPTVSDILKELEKPG 628
Query: 209 AE--QAAKAI-------KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASG 361
+ A K K+ D+ G EG VT V FGAFV+ G + +GLVH+S ++
Sbjct: 629 RDPRPAFKTAVFKEGVEKIADLSSGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSKT 688
Query: 362 FTKNAKDVVQPGQKVTVKVLSVDAEKK 442
F K+ +DVV+PG V VKVL VD +K
Sbjct: 689 FVKDPRDVVKPGDIVKVKVLDVDVPRK 715
[61][TOP]
>UniRef100_Q2B4Z6 Transcription accessory protein (S1 RNA binding domain) n=1
Tax=Bacillus sp. NRRL B-14911 RepID=Q2B4Z6_9BACI
Length = 723
Score = 74.3 bits (181), Expect = 4e-12
Identities = 38/70 (54%), Positives = 48/70 (68%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E +GTV V +FGAFV+ G +GLVHISKL F K+ DVV G VT
Sbjct: 643 LKLEDLKPGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLRKQFVKHPLDVVSVGDVVT 702
Query: 410 VKVLSVDAEK 439
V V S+D++K
Sbjct: 703 VWVDSIDSQK 712
[62][TOP]
>UniRef100_C9AW24 RNA binding protein S1 n=2 Tax=Enterococcus casseliflavus
RepID=C9AW24_ENTCA
Length = 728
Score = 74.3 bits (181), Expect = 4e-12
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E PA + +ED+K G E +GTV V +FGAFV+ G +GLVH+SKL+ F K+
Sbjct: 634 EMPAPLLRKDVLSMEDLKPGMELKGTVRNVIDFGAFVDIGVKQDGLVHLSKLSRSFVKHP 693
Query: 377 KDVVQPGQKVTVKVLSVDAEK 439
KDVV G VTV + VD +K
Sbjct: 694 KDVVSVGDVVTVWIEQVDVKK 714
[63][TOP]
>UniRef100_C9A7Y3 RNA binding protein S1 n=1 Tax=Enterococcus casseliflavus EC20
RepID=C9A7Y3_ENTCA
Length = 728
Score = 74.3 bits (181), Expect = 4e-12
Identities = 38/81 (46%), Positives = 50/81 (61%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E PA + +ED+K G E +GTV V +FGAFV+ G +GLVH+SKL+ F K+
Sbjct: 634 EMPAPLLRKDVLSMEDLKPGMELKGTVRNVIDFGAFVDIGVKQDGLVHLSKLSRSFVKHP 693
Query: 377 KDVVQPGQKVTVKVLSVDAEK 439
KDVV G VTV + VD +K
Sbjct: 694 KDVVSVGDVVTVWIEQVDVKK 714
[64][TOP]
>UniRef100_C7MX99 Transcriptional accessory protein n=1 Tax=Saccharomonospora viridis
DSM 43017 RepID=C7MX99_SACVD
Length = 775
Score = 74.3 bits (181), Expect = 4e-12
Identities = 35/69 (50%), Positives = 47/69 (68%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
LED+K G EG VT V FGAFV+ G + +GLVH+S ++ + + +DVV+PG VTVK
Sbjct: 641 LEDLKPGMRLEGVVTNVAAFGAFVDIGVHQDGLVHVSAMSHRYVSDPRDVVKPGDVVTVK 700
Query: 416 VLSVDAEKK 442
VL VD +K
Sbjct: 701 VLDVDVPRK 709
[65][TOP]
>UniRef100_C1Z9K3 Polyribonucleotide nucleotidyltransferase (Polynucleotide
phosphorylase) n=1 Tax=Planctomyces limnophilus DSM 3776
RepID=C1Z9K3_PLALI
Length = 568
Score = 74.3 bits (181), Expect = 4e-12
Identities = 44/143 (30%), Positives = 75/143 (52%), Gaps = 2/143 (1%)
Frame = +2
Query: 20 RPRSLNSSIFPSSRRMLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAE 199
RPRS S+ P R + + + G +R ++ G + V +
Sbjct: 408 RPRSEISTHAPRLLRTKIDPSKIGLLIGPGGKNIRAIQEQTGAT-IDIEDDGTVVIASSS 466
Query: 200 APAAEQAAKAIKL--EDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKN 373
+ AE A ++ E++K G Y GTV+++++FGAF+ +GL HIS+L+ GF KN
Sbjct: 467 SVGAEDALARVEAIAEEIKVGRVYNGTVSSIKDFGAFIEIAPGKDGLCHISELSDGFVKN 526
Query: 374 AKDVVQPGQKVTVKVLSVDAEKK 442
+VVQ G+K+ VKV+++D + +
Sbjct: 527 VNEVVQVGEKIQVKVIAIDEQNR 549
[66][TOP]
>UniRef100_C0E9B9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum
DSM 5476 RepID=C0E9B9_9CLOT
Length = 717
Score = 74.3 bits (181), Expect = 4e-12
Identities = 38/82 (46%), Positives = 55/82 (67%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E P + ++L+D+K G E +GTV V +FGAFV+ G + +GLVH+S+LA+ F K+
Sbjct: 622 ELPKPLLRSDVLELKDLKPGMELKGTVRNVIDFGAFVDIGVHEDGLVHVSQLANRFVKHP 681
Query: 377 KDVVQPGQKVTVKVLSVDAEKK 442
DVV+ G VTV VL VD ++K
Sbjct: 682 LDVVKVGDVVTVWVLDVDLKRK 703
[67][TOP]
>UniRef100_B0MH09 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM
14662 RepID=B0MH09_9FIRM
Length = 713
Score = 74.3 bits (181), Expect = 4e-12
Identities = 37/71 (52%), Positives = 51/71 (71%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+++ED+KEG + +GTV V +FGAFV+ G + +GLVHIS++A F K+ +VV G V
Sbjct: 634 MEMEDLKEGMKLKGTVRNVIDFGAFVDIGVHQDGLVHISQMADRFVKHPLEVVSVGDVVD 693
Query: 410 VKVLSVDAEKK 442
V VLSVD EKK
Sbjct: 694 VTVLSVDLEKK 704
[68][TOP]
>UniRef100_O31489 Uncharacterized protein ydcI n=1 Tax=Bacillus subtilis
RepID=YDCI_BACSU
Length = 719
Score = 74.3 bits (181), Expect = 4e-12
Identities = 38/70 (54%), Positives = 49/70 (70%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
++LED+KEG E +GTV V +FGAFV+ G +GLVHISKL++ F K+ DVV G VT
Sbjct: 641 LQLEDLKEGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNQFVKHPLDVVSVGDIVT 700
Query: 410 VKVLSVDAEK 439
V V VD +K
Sbjct: 701 VWVDGVDVQK 710
[69][TOP]
>UniRef100_UPI0001AEF256 transcription accessory protein n=1 Tax=Streptomyces ghanaensis ATCC
14672 RepID=UPI0001AEF256
Length = 792
Score = 73.9 bits (180), Expect = 5e-12
Identities = 52/149 (34%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Frame = +2
Query: 29 SLNSSIFPSSRRMLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAE--- 199
S++ +P RRM++ G+ +VLR +R P F G+ + E
Sbjct: 568 SVHPEAYPVVRRMVKTSGQEVAALIGNTAVLRSLR-PQDFVDETF-GLPTVTDILKELEK 625
Query: 200 -----APAAEQAA---KAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLA 355
PA AA K+ D+ G EG VT V FGAFV+ G + +GLVH+S ++
Sbjct: 626 PGRDPRPAFRTAAFKEGVEKISDLSSGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMS 685
Query: 356 SGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
F K+ +DVV+PG V VKVL VD +K
Sbjct: 686 KTFVKDPRDVVKPGDIVKVKVLDVDIPRK 714
[70][TOP]
>UniRef100_A9BZV4 RNA binding S1 domain protein n=1 Tax=Delftia acidovorans SPH-1
RepID=A9BZV4_DELAS
Length = 786
Score = 73.9 bits (180), Expect = 5e-12
Identities = 34/69 (49%), Positives = 52/69 (75%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
++D+KEG EGTV+ V +FGAFV+ G + +GLVH+S+++ F ++A++VV+ GQ V VK
Sbjct: 658 IKDLKEGMTLEGTVSNVAQFGAFVDLGVHQDGLVHVSQMSHKFIEDAREVVKTGQIVKVK 717
Query: 416 VLSVDAEKK 442
VL VD +K
Sbjct: 718 VLEVDVARK 726
[71][TOP]
>UniRef100_C7QJM7 RNA binding S1 domain protein n=1 Tax=Catenulispora acidiphila DSM
44928 RepID=C7QJM7_CATAD
Length = 838
Score = 73.9 bits (180), Expect = 5e-12
Identities = 56/149 (37%), Positives = 74/149 (49%), Gaps = 11/149 (7%)
Frame = +2
Query: 29 SLNSSIFPSSRRMLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEA-- 202
S++ +P RR+L G LR +R PA F GV + AE
Sbjct: 576 SVHPEAYPVVRRILASTGSGIKELIGDTKTLRALR-PAEFADDTF-GVPTVTDILAELEK 633
Query: 203 ------PAAEQAA---KAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLA 355
PA + A K+ D++ G EG VT V FGAFV+ G + +GLVHIS L+
Sbjct: 634 PGRDPRPAFKTATFKEGVEKIGDLQPGMILEGVVTNVAAFGAFVDVGVHQDGLVHISALS 693
Query: 356 SGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
F K+ +DVV+PG V VKVL VDA +K
Sbjct: 694 KTFVKDPRDVVKPGDVVRVKVLDVDAVRK 722
[72][TOP]
>UniRef100_C2C0H7 S1 domain RNA-binding protein n=1 Tax=Listeria grayi DSM 20601
RepID=C2C0H7_LISGR
Length = 726
Score = 73.9 bits (180), Expect = 5e-12
Identities = 38/70 (54%), Positives = 46/70 (65%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+K+ED+K G E +GTV V +FGAFV+ G +GLVHISKL+ F KN DVV G VT
Sbjct: 642 VKMEDLKPGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSKQFIKNPMDVVSVGDIVT 701
Query: 410 VKVLSVDAEK 439
V V VD K
Sbjct: 702 VWVEEVDLNK 711
[73][TOP]
>UniRef100_Q1WSR3 Transcription accessory protein n=1 Tax=Lactobacillus salivarius
UCC118 RepID=Q1WSR3_LACS1
Length = 723
Score = 73.6 bits (179), Expect = 7e-12
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+K+ED+K G + EGTV V +FGAFV+ G +GLVH+SKL+ + N +DVV GQ VT
Sbjct: 642 LKIEDLKAGMQLEGTVRNVVDFGAFVDIGVKQDGLVHLSKLSKKYVSNPRDVVAVGQIVT 701
Query: 410 VKVLSVDAEKK 442
V V VD +K
Sbjct: 702 VWVEDVDLNRK 712
[74][TOP]
>UniRef100_Q1DCH5 S1 RNA binding domain protein n=1 Tax=Myxococcus xanthus DK 1622
RepID=Q1DCH5_MYXXD
Length = 783
Score = 73.6 bits (179), Expect = 7e-12
Identities = 34/69 (49%), Positives = 51/69 (73%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
LEDVKEG +G VT V FGAFV+ G + +GLVH+S++++ F K+ +VV+ G ++TV+
Sbjct: 637 LEDVKEGMVLQGVVTNVTAFGAFVDVGVHQDGLVHVSQISTRFVKDPSEVVKVGDRLTVR 696
Query: 416 VLSVDAEKK 442
VL+VD +K
Sbjct: 697 VLTVDLARK 705
[75][TOP]
>UniRef100_C6E3L9 RNA binding S1 domain protein n=1 Tax=Geobacter sp. M21
RepID=C6E3L9_GEOSM
Length = 756
Score = 73.6 bits (179), Expect = 7e-12
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+ + D+KEG +G VT V FGAFV+ G + +GLVH+S+L FTK+ D V+ GQ V
Sbjct: 641 VTIADLKEGMILQGVVTNVAAFGAFVDIGVHQDGLVHVSQLTHRFTKDPNDAVKVGQIVK 700
Query: 410 VKVLSVDAEKK 442
VKVLS D E+K
Sbjct: 701 VKVLSADPERK 711
[76][TOP]
>UniRef100_B8HDI0 RNA binding S1 domain protein n=1 Tax=Arthrobacter chlorophenolicus
A6 RepID=B8HDI0_ARTCA
Length = 830
Score = 73.6 bits (179), Expect = 7e-12
Identities = 36/70 (51%), Positives = 48/70 (68%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
K+ D+K G EGTVT V FGAFV+ G + +GLVH+S LA+ F + ++VV+ GQ V V
Sbjct: 656 KISDLKPGMVLEGTVTNVAAFGAFVDVGVHQDGLVHVSALANRFVSDPREVVKSGQVVRV 715
Query: 413 KVLSVDAEKK 442
KVL D E+K
Sbjct: 716 KVLEADPERK 725
[77][TOP]
>UniRef100_C8NGU9 Histidine triad domain-containing protein n=1 Tax=Granulicatella
adiacens ATCC 49175 RepID=C8NGU9_9LACT
Length = 751
Score = 73.6 bits (179), Expect = 7e-12
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+K+ED++ G E EGTV V +FGAFV+ G +GLVHISKL GF K+ DVV G VT
Sbjct: 667 LKMEDLQVGMELEGTVRNVVDFGAFVDIGVKQDGLVHISKLKKGFVKHPSDVVAVGDIVT 726
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 727 VWVTELDLKK 736
[78][TOP]
>UniRef100_C3BEW6 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus pseudomycoides DSM 12442
RepID=C3BEW6_9BACI
Length = 722
Score = 73.6 bits (179), Expect = 7e-12
Identities = 39/70 (55%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V VD +K
Sbjct: 702 VWVDDVDMKK 711
[79][TOP]
>UniRef100_C3AGL6 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=2 Tax=Bacillus mycoides RepID=C3AGL6_BACMY
Length = 722
Score = 73.6 bits (179), Expect = 7e-12
Identities = 39/70 (55%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V VD +K
Sbjct: 702 VWVDDVDMKK 711
[80][TOP]
>UniRef100_C2Z291 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=2 Tax=Bacillus cereus RepID=C2Z291_BACCE
Length = 722
Score = 73.6 bits (179), Expect = 7e-12
Identities = 38/70 (54%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[81][TOP]
>UniRef100_A4EBC2 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens
ATCC 25986 RepID=A4EBC2_9ACTN
Length = 442
Score = 73.6 bits (179), Expect = 7e-12
Identities = 37/82 (45%), Positives = 54/82 (65%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
+AP + A+ ++D++ G E +GTV V +FGAFV+ G + +GLVHISKLA+ F K+
Sbjct: 351 DAPEVVFSRSALSIDDLEPGMELKGTVRNVVDFGAFVDVGVHQDGLVHISKLANRFVKHP 410
Query: 377 KDVVQPGQKVTVKVLSVDAEKK 442
DVV+ G V V V VD ++K
Sbjct: 411 SDVVRVGDTVKVWVEKVDRDRK 432
[82][TOP]
>UniRef100_UPI0001B54FC8 RNA-binding S1 domain-containing protein n=1 Tax=Streptomyces sp.
AA4 RepID=UPI0001B54FC8
Length = 788
Score = 73.2 bits (178), Expect = 9e-12
Identities = 34/70 (48%), Positives = 46/70 (65%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
K+ D+K G EG VT V FGAF++ G + +GL H+S L+ F K+ +DVV+PG V V
Sbjct: 650 KIADLKPGMRLEGVVTNVAAFGAFIDVGVHQDGLAHVSALSKNFVKDPRDVVKPGDIVKV 709
Query: 413 KVLSVDAEKK 442
KVL VD +K
Sbjct: 710 KVLDVDVPRK 719
[83][TOP]
>UniRef100_Q81IT3 Transcription accessory protein (S1 RNA binding domain) n=1
Tax=Bacillus cereus ATCC 14579 RepID=Q81IT3_BACCR
Length = 724
Score = 73.2 bits (178), Expect = 9e-12
Identities = 38/70 (54%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 644 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 703
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 704 VWVDDIDTKK 713
[84][TOP]
>UniRef100_B7IU35 S1 RNA binding domain protein n=1 Tax=Bacillus cereus G9842
RepID=B7IU35_BACC2
Length = 722
Score = 73.2 bits (178), Expect = 9e-12
Identities = 38/70 (54%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[85][TOP]
>UniRef100_B7H4P5 S1 RNA binding domain protein n=1 Tax=Bacillus cereus B4264
RepID=B7H4P5_BACC4
Length = 722
Score = 73.2 bits (178), Expect = 9e-12
Identities = 38/70 (54%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[86][TOP]
>UniRef100_C8WWJ6 Polyribonucleotide nucleotidyltransferase n=1 Tax=Alicyclobacillus
acidocaldarius subsp. acidocaldarius DSM 446
RepID=C8WWJ6_ALIAC
Length = 735
Score = 73.2 bits (178), Expect = 9e-12
Identities = 51/128 (39%), Positives = 68/128 (53%), Gaps = 12/128 (9%)
Frame = +2
Query: 83 RTATVKAHGRSVLRPVRGPAGR---RQVAFTGVRPSV----RVFAEAPAAEQAAKAIKL- 238
R TVK H + R V GP GR + + TGV+ + RV+ + AEQA +A ++
Sbjct: 550 RVITVKIHPDKI-RDVIGPGGRVINKIIEETGVKIDIEQDGRVYIHSTDAEQANRAREMV 608
Query: 239 ----EDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKV 406
DV+ G+ Y G VT VE+FGAFV GLVHIS+L +DV Q G +
Sbjct: 609 ENIVRDVEVGATYTGKVTRVEKFGAFVEILPGKEGLVHISQLDLNRVAKVEDVCQVGDTL 668
Query: 407 TVKVLSVD 430
TVKV +D
Sbjct: 669 TVKVTEID 676
[87][TOP]
>UniRef100_C3IDV7 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus thuringiensis IBL 4222
RepID=C3IDV7_BACTU
Length = 722
Score = 73.2 bits (178), Expect = 9e-12
Identities = 38/70 (54%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[88][TOP]
>UniRef100_C3GVJ8 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1 RepID=C3GVJ8_BACTU
Length = 722
Score = 73.2 bits (178), Expect = 9e-12
Identities = 38/70 (54%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[89][TOP]
>UniRef100_C3DE64 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus thuringiensis serovar sotto
str. T04001 RepID=C3DE64_BACTS
Length = 722
Score = 73.2 bits (178), Expect = 9e-12
Identities = 38/70 (54%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[90][TOP]
>UniRef100_C3CD35 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=4 Tax=Bacillus thuringiensis
RepID=C3CD35_BACTU
Length = 722
Score = 73.2 bits (178), Expect = 9e-12
Identities = 38/70 (54%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[91][TOP]
>UniRef100_C2Y524 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus AH676 RepID=C2Y524_BACCE
Length = 722
Score = 73.2 bits (178), Expect = 9e-12
Identities = 38/70 (54%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[92][TOP]
>UniRef100_C2SVD2 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=3 Tax=Bacillus cereus group RepID=C2SVD2_BACCE
Length = 722
Score = 73.2 bits (178), Expect = 9e-12
Identities = 38/70 (54%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[93][TOP]
>UniRef100_C2RHI8 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus BDRD-ST24
RepID=C2RHI8_BACCE
Length = 722
Score = 73.2 bits (178), Expect = 9e-12
Identities = 38/70 (54%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[94][TOP]
>UniRef100_C2R2J5 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=4 Tax=Bacillus cereus group RepID=C2R2J5_BACCE
Length = 722
Score = 73.2 bits (178), Expect = 9e-12
Identities = 38/70 (54%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[95][TOP]
>UniRef100_C2MVA4 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus ATCC 10876
RepID=C2MVA4_BACCE
Length = 722
Score = 73.2 bits (178), Expect = 9e-12
Identities = 38/70 (54%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[96][TOP]
>UniRef100_C2EE72 S1 domain RNA-binding protein n=1 Tax=Lactobacillus ruminis ATCC
25644 RepID=C2EE72_9LACO
Length = 727
Score = 73.2 bits (178), Expect = 9e-12
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+ LED+KEG + +GTV V +FGAFV+ G +GLVH+SKL GF KN DVV G V
Sbjct: 645 LHLEDLKEGMKLQGTVRNVVDFGAFVDIGVKQDGLVHVSKLKKGFVKNPSDVVSVGDIVD 704
Query: 410 VKVLSVDAEK 439
V + SVD ++
Sbjct: 705 VWIDSVDEKR 714
[97][TOP]
>UniRef100_B5UVX0 S1 RNA binding domain protein n=2 Tax=Bacillus cereus
RepID=B5UVX0_BACCE
Length = 722
Score = 73.2 bits (178), Expect = 9e-12
Identities = 38/70 (54%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[98][TOP]
>UniRef100_Q6F7B6 Putative uncharacterized protein n=1 Tax=Acinetobacter sp. ADP1
RepID=Q6F7B6_ACIAD
Length = 796
Score = 72.8 bits (177), Expect = 1e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
++ + EG + EG VT V FGAFV+ G + +GLVHIS+LA+ F + VV+PGQ V V
Sbjct: 647 EIAQLTEGMQLEGVVTNVTNFGAFVDIGVHQDGLVHISELANEFVSDPHKVVKPGQIVQV 706
Query: 413 KVLSVDAEKK 442
+V+ VDAE+K
Sbjct: 707 RVIQVDAERK 716
[99][TOP]
>UniRef100_B1VG79 Putative transcriptional accessory protein n=1 Tax=Corynebacterium
urealyticum DSM 7109 RepID=B1VG79_CORU7
Length = 787
Score = 72.8 bits (177), Expect = 1e-11
Identities = 39/90 (43%), Positives = 54/90 (60%)
Frame = +2
Query: 173 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
RPS + + A E K+ DV+ G EGTVT V FGAFV+ G + +GLVH+S +
Sbjct: 624 RPSFKTASLAEGVE------KVSDVRPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSAM 677
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
A F K+ +VV GQ V VKV+ VD +++
Sbjct: 678 ADRFVKDPHEVVHSGQVVKVKVMDVDVDRQ 707
[100][TOP]
>UniRef100_A9F254 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So
ce 56' RepID=A9F254_SORC5
Length = 788
Score = 72.8 bits (177), Expect = 1e-11
Identities = 33/69 (47%), Positives = 48/69 (69%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
+ED+K G E EG VT V FGAFV+ G + +GLVH+S+LA F K+ +V + G+K+ V+
Sbjct: 653 MEDLKPGMELEGVVTNVTAFGAFVDIGVHQDGLVHVSQLADRFVKDPNEVAKVGEKIKVR 712
Query: 416 VLSVDAEKK 442
VL +D +K
Sbjct: 713 VLEIDLVRK 721
[101][TOP]
>UniRef100_A7GKE9 RNA binding S1 domain protein n=1 Tax=Bacillus cytotoxicus NVH
391-98 RepID=A7GKE9_BACCN
Length = 722
Score = 72.8 bits (177), Expect = 1e-11
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAF++ G +GLVHISKL+ F K+ D+V GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFIDIGVKQDGLVHISKLSKQFVKHPLDIVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V VD +K
Sbjct: 702 VWVDDVDMKK 711
[102][TOP]
>UniRef100_C3A0G0 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus mycoides DSM 2048
RepID=C3A0G0_BACMY
Length = 722
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGT+ V +FGAFV+ G +GLVHISKL+ F K+ D+V GQ V
Sbjct: 642 LKLEDLKRGMELEGTIRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDIVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[103][TOP]
>UniRef100_C2XNH9 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus AH603 RepID=C2XNH9_BACCE
Length = 722
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGT+ V +FGAFV+ G +GLVHISKL+ F K+ D+V GQ V
Sbjct: 642 LKLEDLKRGMELEGTIRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDIVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[104][TOP]
>UniRef100_A9VQF5 RNA binding S1 domain protein n=2 Tax=Bacillus cereus group
RepID=A9VQF5_BACWK
Length = 722
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGT+ V +FGAFV+ G +GLVHISKL+ F K+ D+V GQ V
Sbjct: 642 LKLEDLKRGMELEGTIRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDIVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[105][TOP]
>UniRef100_C2PQA5 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus AH621 RepID=C2PQA5_BACCE
Length = 722
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGT+ V +FGAFV+ G +GLVHISKL+ F K+ D+V GQ V
Sbjct: 642 LKLEDLKRGMELEGTIRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDIVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[106][TOP]
>UniRef100_C0GIG1 RNA binding S1 domain protein n=1 Tax=Dethiobacter alkaliphilus AHT
1 RepID=C0GIG1_9FIRM
Length = 713
Score = 72.8 bits (177), Expect = 1e-11
Identities = 35/71 (49%), Positives = 50/71 (70%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+ LED++EG E G V V +FGAFV+ G + +GL+HIS+L+ F K+ +VVQ G V
Sbjct: 633 LHLEDLQEGMELTGVVRNVVDFGAFVDIGVHQDGLIHISQLSDKFVKHPLEVVQVGDVVE 692
Query: 410 VKVLSVDAEKK 442
VKV+S+D +KK
Sbjct: 693 VKVISLDVKKK 703
[107][TOP]
>UniRef100_B5D203 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM
17135 RepID=B5D203_9BACE
Length = 712
Score = 72.8 bits (177), Expect = 1e-11
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
L+D++EG E G VT + FG FV+ G NGLVH+S+LA F N DVV+ Q V VK
Sbjct: 633 LDDLQEGMELPGIVTNITNFGCFVDIGIKENGLVHVSQLADRFVSNPADVVRIHQHVRVK 692
Query: 416 VLSVDAEKK 442
V+S+D E+K
Sbjct: 693 VMSIDHERK 701
[108][TOP]
>UniRef100_B4VGY9 S1 RNA binding domain protein n=1 Tax=Microcoleus chthonoplastes
PCC 7420 RepID=B4VGY9_9CYAN
Length = 718
Score = 72.8 bits (177), Expect = 1e-11
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
++ D+K G E EG VT V FGAFV+ G + +GLVHIS+LA F + K++V+ GQ V V
Sbjct: 637 EMSDLKVGMELEGIVTNVANFGAFVDIGVHQDGLVHISQLADRFVDDPKEIVKVGQVVNV 696
Query: 413 KVLSVDAEKK 442
+VLSVD + K
Sbjct: 697 RVLSVDEKLK 706
[109][TOP]
>UniRef100_Q3A645 Transcriptional accessory protein n=1 Tax=Pelobacter carbinolicus
DSM 2380 RepID=Q3A645_PELCD
Length = 759
Score = 72.4 bits (176), Expect = 1e-11
Identities = 46/107 (42%), Positives = 58/107 (54%)
Frame = +2
Query: 122 RPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGA 301
+P R P RRQ R VR ++ D+KEG GTVT V FGA
Sbjct: 622 KPGRDP--RRQFETVSFRDDVR---------------EISDLKEGMILSGTVTNVAAFGA 664
Query: 302 FVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
FV+ G + +GLVH+S LA F K+ +VV+ G V VKVLSVDA +K
Sbjct: 665 FVDIGVHQDGLVHVSHLAHRFVKDPGEVVRVGDIVKVKVLSVDAARK 711
[110][TOP]
>UniRef100_C1F2W2 S1 RNA binding domain protein n=1 Tax=Acidobacterium capsulatum
ATCC 51196 RepID=C1F2W2_ACIC5
Length = 753
Score = 72.4 bits (176), Expect = 1e-11
Identities = 40/81 (49%), Positives = 53/81 (65%)
Frame = +2
Query: 200 APAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAK 379
AP+ + K I D+KEG EG VT V +FGAFV+ G + +GLVHIS+L++ F K
Sbjct: 631 APSFLEGVKEIT--DLKEGMVLEGVVTNVTKFGAFVDVGVHQDGLVHISELSNRFIKEPS 688
Query: 380 DVVQPGQKVTVKVLSVDAEKK 442
+ V+ GQ V VKVLS DA+ K
Sbjct: 689 EAVKAGQIVRVKVLSADAKTK 709
[111][TOP]
>UniRef100_B8FHU3 RNA binding S1 domain protein n=1 Tax=Desulfatibacillum
alkenivorans AK-01 RepID=B8FHU3_DESAA
Length = 752
Score = 72.4 bits (176), Expect = 1e-11
Identities = 35/70 (50%), Positives = 49/70 (70%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
+++D++ G E G VT V FGAFV+ G + +GLVHIS+L+ GF KN DVV+ Q+V V
Sbjct: 633 EMKDLEPGMELPGIVTNVTNFGAFVDVGVHQDGLVHISQLSDGFVKNPADVVKVQQRVKV 692
Query: 413 KVLSVDAEKK 442
+VL VD +K
Sbjct: 693 RVLEVDLPRK 702
[112][TOP]
>UniRef100_B5ZS43 RNA binding S1 domain protein n=1 Tax=Rhizobium leguminosarum bv.
trifolii WSM2304 RepID=B5ZS43_RHILW
Length = 769
Score = 72.4 bits (176), Expect = 1e-11
Identities = 39/90 (43%), Positives = 55/90 (61%)
Frame = +2
Query: 173 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
RPS + A A + + D+K G EGTVT V FGAFV+ G + +GLVH+S+L
Sbjct: 629 RPSFKTAAFAEGVNE------ISDLKPGMMLEGTVTNVAAFGAFVDIGVHQDGLVHVSQL 682
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
A F K+ +VV+ G V V+V+ VDA++K
Sbjct: 683 ADRFVKDPHEVVKAGDVVKVRVVEVDAKRK 712
[113][TOP]
>UniRef100_A1W6M2 RNA binding S1 domain protein n=1 Tax=Acidovorax sp. JS42
RepID=A1W6M2_ACISJ
Length = 798
Score = 72.4 bits (176), Expect = 1e-11
Identities = 34/69 (49%), Positives = 51/69 (73%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
+ D++EG EGTV+ V +FGAFV+ G + +GLVH+S+L+ F ++A++VV+ G V VK
Sbjct: 673 IADLREGMVLEGTVSNVAQFGAFVDLGVHQDGLVHVSQLSHKFVQDAREVVKTGDIVKVK 732
Query: 416 VLSVDAEKK 442
VL VDA +K
Sbjct: 733 VLEVDAARK 741
[114][TOP]
>UniRef100_Q1JW78 RNA binding S1 n=1 Tax=Desulfuromonas acetoxidans DSM 684
RepID=Q1JW78_DESAC
Length = 747
Score = 72.4 bits (176), Expect = 1e-11
Identities = 44/109 (40%), Positives = 61/109 (55%)
Frame = +2
Query: 116 VLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEF 295
+L+P R P RRQ R V+ ++ D++ G +G+VT V F
Sbjct: 643 LLKPGRDP--RRQFETASFRDDVQ---------------EMSDLQPGMVLQGSVTNVAAF 685
Query: 296 GAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
GAFV+ G + +GLVHIS+LA F KN ++V+ GQ V VKVLSVD +K
Sbjct: 686 GAFVDIGVHQDGLVHISELADRFVKNPAEIVKVGQVVHVKVLSVDTTRK 734
[115][TOP]
>UniRef100_C2EGG6 S1 domain RNA-binding protein n=1 Tax=Lactobacillus salivarius ATCC
11741 RepID=C2EGG6_9LACO
Length = 723
Score = 72.4 bits (176), Expect = 1e-11
Identities = 35/71 (49%), Positives = 48/71 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+K+ED+K G + EGTV V +FGAFV+ G +GLVH+SKL+ + N +DVV GQ VT
Sbjct: 642 LKIEDLKAGMQLEGTVRNVVDFGAFVDIGVKQDGLVHLSKLSKKYVSNPRDVVAVGQIVT 701
Query: 410 VKVLSVDAEKK 442
V V VD ++
Sbjct: 702 VWVEDVDLNRR 712
[116][TOP]
>UniRef100_A7VC71 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50
RepID=A7VC71_9CLOT
Length = 716
Score = 72.4 bits (176), Expect = 1e-11
Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 1/129 (0%)
Frame = +2
Query: 59 RRMLRELG-RTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIK 235
+ + +ELG T TV + + +P R P +E P ++
Sbjct: 594 KALAKELGVGTVTVTDLVKELEKPARDPR-----------------SEMPQPILRGDILE 636
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
++D+KEG +GTV V +FGAFV+ G + +GLVHIS+++ F K+ DVV G VTVK
Sbjct: 637 MKDLKEGMILKGTVRNVIDFGAFVDIGVHQDGLVHISQMSDKFIKHPLDVVSVGDIVTVK 696
Query: 416 VLSVDAEKK 442
V+ VD KK
Sbjct: 697 VMGVDLAKK 705
[117][TOP]
>UniRef100_B8BU42 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BU42_THAPS
Length = 398
Score = 72.4 bits (176), Expect = 1e-11
Identities = 31/68 (45%), Positives = 50/68 (73%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
L D++ G+ E TV T+ +GAF++ GA ++ LVH+S+L+ F N +DVV+ G+K+TV+
Sbjct: 138 LADLEIGASVEATVKTITAYGAFLDIGAKSDALVHVSRLSDDFVANVEDVVKAGEKITVR 197
Query: 416 VLSVDAEK 439
++SVD EK
Sbjct: 198 IVSVDTEK 205
[118][TOP]
>UniRef100_UPI0001B4E1EC transcriptional accessory protein n=1 Tax=Streptomyces
viridochromogenes DSM 40736 RepID=UPI0001B4E1EC
Length = 794
Score = 72.0 bits (175), Expect = 2e-11
Identities = 51/150 (34%), Positives = 76/150 (50%), Gaps = 12/150 (8%)
Frame = +2
Query: 29 SLNSSIFPSSRRMLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEA-- 202
S++ +P RRM++ +G+ SVLR ++ + V T P+V +
Sbjct: 572 SVHPEAYPVVRRMVKTVGQEVAGLIGNTSVLRSLKP---QEFVDDTFGLPTVTDILKELE 628
Query: 203 -------PAAEQAA---KAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
PA + A K+ D+ G EG VT V FGAFV+ G + +GLVH+S +
Sbjct: 629 KPGRDPRPAFKTAVFKDGVEKISDLSAGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAM 688
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
+ F K+ +DVV+PG V VKVL VD +K
Sbjct: 689 SKTFVKDPRDVVKPGDIVKVKVLDVDIPRK 718
[119][TOP]
>UniRef100_UPI0001B4186F S1 RNA binding domain protein n=1 Tax=Bacillus anthracis str.
Australia 94 RepID=UPI0001B4186F
Length = 722
Score = 72.0 bits (175), Expect = 2e-11
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[120][TOP]
>UniRef100_UPI0001AEDDFE transcriptional accessory protein n=1 Tax=Streptomyces albus J1074
RepID=UPI0001AEDDFE
Length = 807
Score = 72.0 bits (175), Expect = 2e-11
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
KL D++ G EG VT V FGAFV+ G + +GLVH+S ++ F K+ ++VV+PG V V
Sbjct: 648 KLSDLEAGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSRNFVKDPREVVKPGDIVKV 707
Query: 413 KVLSVDAEKK 442
KV+ VDA +K
Sbjct: 708 KVMEVDAARK 717
[121][TOP]
>UniRef100_Q73ET3 S1 RNA binding domain protein n=1 Tax=Bacillus cereus ATCC 10987
RepID=Q73ET3_BACC1
Length = 722
Score = 72.0 bits (175), Expect = 2e-11
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[122][TOP]
>UniRef100_Q63GW7 Probable transcription accessory protein, S1 RNA-binding domain n=1
Tax=Bacillus cereus E33L RepID=Q63GW7_BACCZ
Length = 724
Score = 72.0 bits (175), Expect = 2e-11
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 644 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 703
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 704 VWVDDIDTKK 713
[123][TOP]
>UniRef100_Q47TS6 RNA binding S1:Resolvase, RNase H-like fold n=1 Tax=Thermobifida
fusca YX RepID=Q47TS6_THEFY
Length = 777
Score = 72.0 bits (175), Expect = 2e-11
Identities = 52/149 (34%), Positives = 73/149 (48%), Gaps = 11/149 (7%)
Frame = +2
Query: 29 SLNSSIFPSSRRMLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEA-- 202
S++ +P RR+L GR LR +R P F G+ + AE
Sbjct: 568 SVHPEAYPVVRRILEATGRDIRALIGDTDTLRSLR-PDDFVDERF-GLPTVTDILAELEK 625
Query: 203 ------PAAEQAAKAIKLEDVKE---GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLA 355
P + AA +ED+ + G EG VT V FGAFV+ G + +GLVH+S ++
Sbjct: 626 PGRDPRPEFQTAAFRDGVEDITDLEPGMVLEGVVTNVAAFGAFVDVGVHHDGLVHVSAMS 685
Query: 356 SGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
F K+ +DVV+PG V VKVL VD +K
Sbjct: 686 KSFVKDPRDVVKPGDIVRVKVLDVDVRRK 714
[124][TOP]
>UniRef100_C1EUA0 S1 RNA binding domain protein n=1 Tax=Bacillus cereus 03BB102
RepID=C1EUA0_BACC3
Length = 722
Score = 72.0 bits (175), Expect = 2e-11
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[125][TOP]
>UniRef100_B9MA81 Resolvase RNase H domain protein n=1 Tax=Diaphorobacter sp. TPSY
RepID=B9MA81_DIAST
Length = 798
Score = 72.0 bits (175), Expect = 2e-11
Identities = 34/69 (49%), Positives = 50/69 (72%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
+ D++EG EGTV+ V +FGAFV+ G + +GLVH+S+L+ F +A++VV+ G V VK
Sbjct: 673 IADLREGMVLEGTVSNVAQFGAFVDLGVHQDGLVHVSQLSHKFVNDAREVVKTGDIVKVK 732
Query: 416 VLSVDAEKK 442
VL VDA +K
Sbjct: 733 VLEVDAARK 741
[126][TOP]
>UniRef100_B8IV07 RNA binding S1 domain protein n=1 Tax=Methylobacterium nodulans ORS
2060 RepID=B8IV07_METNO
Length = 769
Score = 72.0 bits (175), Expect = 2e-11
Identities = 41/90 (45%), Positives = 52/90 (57%)
Frame = +2
Query: 173 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
RPS R E A D+K G EG VT V FGAFV+ G + +GLVHIS L
Sbjct: 630 RPSFRTATFREGVETIA------DLKPGMLLEGVVTNVAAFGAFVDVGVHQDGLVHISAL 683
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
++ F K+ ++VV+PG V VKVL VD +K
Sbjct: 684 SNSFVKDPRNVVKPGDVVKVKVLDVDVPRK 713
[127][TOP]
>UniRef100_B3E6B1 RNA binding S1 domain protein n=1 Tax=Geobacter lovleyi SZ
RepID=B3E6B1_GEOLS
Length = 762
Score = 72.0 bits (175), Expect = 2e-11
Identities = 35/70 (50%), Positives = 48/70 (68%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
++ D++EG +G VT V FGAFV+ G + +GLVH+S LA+ F K+ D VQ GQ V V
Sbjct: 642 EISDLQEGMILQGVVTNVTAFGAFVDIGVHQDGLVHVSHLANRFIKDPNDAVQVGQVVKV 701
Query: 413 KVLSVDAEKK 442
KVLS D ++K
Sbjct: 702 KVLSADPQRK 711
[128][TOP]
>UniRef100_B2IGR3 RNA binding S1 domain protein n=1 Tax=Beijerinckia indica subsp.
indica ATCC 9039 RepID=B2IGR3_BEII9
Length = 766
Score = 72.0 bits (175), Expect = 2e-11
Identities = 50/129 (38%), Positives = 68/129 (52%), Gaps = 2/129 (1%)
Frame = +2
Query: 62 RMLREL-GRTATVKAHGRSVLRPVR-GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIK 235
R LR L G TAT+K+ + R G R + +P E A A
Sbjct: 585 RDLRSLMGDTATLKSLNPAQFVDERFGLPTVRDILLELEKPGRDPRPEFKTATFAEGIDD 644
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
++D+K G EGTVT V FGAFV+ G + +GLVHIS+LA F K D+V+ G V V+
Sbjct: 645 IKDLKPGMTLEGTVTNVTNFGAFVDIGVHQDGLVHISQLADRFVKEPNDLVKAGDVVKVR 704
Query: 416 VLSVDAEKK 442
V+ VD ++K
Sbjct: 705 VVEVDVKRK 713
[129][TOP]
>UniRef100_A5G3R7 RNA binding S1 domain protein n=1 Tax=Geobacter uraniireducens Rf4
RepID=A5G3R7_GEOUR
Length = 757
Score = 72.0 bits (175), Expect = 2e-11
Identities = 36/70 (51%), Positives = 49/70 (70%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
+L D++EG +GTVT V FGAFV+ G + +GLVH+S LA F K+ + V+ GQ V V
Sbjct: 642 ELGDLQEGMILQGTVTNVTAFGAFVDIGVHQDGLVHVSHLAQRFVKDPNEAVKVGQIVKV 701
Query: 413 KVLSVDAEKK 442
KVLSVD ++K
Sbjct: 702 KVLSVDLQRK 711
[130][TOP]
>UniRef100_A0JTC3 RNA binding S1 domain protein n=1 Tax=Arthrobacter sp. FB24
RepID=A0JTC3_ARTS2
Length = 861
Score = 72.0 bits (175), Expect = 2e-11
Identities = 35/70 (50%), Positives = 48/70 (68%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
K+ D++ G EGTVT V FGAFV+ G + +GLVH+S LA+ F + ++VV+ GQ V V
Sbjct: 685 KISDLRPGMILEGTVTNVAAFGAFVDVGVHQDGLVHVSALANRFVSDPREVVKSGQVVRV 744
Query: 413 KVLSVDAEKK 442
KVL D E+K
Sbjct: 745 KVLEADPERK 754
[131][TOP]
>UniRef100_Q6SGM3 S1 RNA binding domain protein n=1 Tax=uncultured marine bacterium
463 RepID=Q6SGM3_9BACT
Length = 772
Score = 72.0 bits (175), Expect = 2e-11
Identities = 35/70 (50%), Positives = 47/70 (67%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
K+ D++ EGTVT V FGAF++ G + +GLVHIS LA F K+ +DVV+ G V V
Sbjct: 644 KISDLRPDMVLEGTVTNVTNFGAFIDIGVHQDGLVHISALAEKFVKDPRDVVKAGDVVRV 703
Query: 413 KVLSVDAEKK 442
KV+ VDA +K
Sbjct: 704 KVMEVDAPRK 713
[132][TOP]
>UniRef100_Q4MPT2 S1 RNA binding domain protein n=1 Tax=Bacillus cereus G9241
RepID=Q4MPT2_BACCE
Length = 722
Score = 72.0 bits (175), Expect = 2e-11
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[133][TOP]
>UniRef100_C6QU16 RNA binding S1 domain protein n=1 Tax=Geobacillus sp. Y4.1MC1
RepID=C6QU16_9BACI
Length = 728
Score = 72.0 bits (175), Expect = 2e-11
Identities = 40/90 (44%), Positives = 53/90 (58%)
Frame = +2
Query: 170 VRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISK 349
VRP E P +K+ED+K+G E EGTV V +FGAFV+ G +GLVHISK
Sbjct: 620 VRPERDPRDELPKPLLRKDILKMEDLKKGMELEGTVRNVVDFGAFVDIGVKQDGLVHISK 679
Query: 350 LASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
L+ + ++ DVV G V V V +VD +K
Sbjct: 680 LSKQYVRHPLDVVSVGDVVKVWVDNVDVDK 709
[134][TOP]
>UniRef100_C5R7Z4 S1 domain RNA-binding protein n=1 Tax=Weissella paramesenteroides
ATCC 33313 RepID=C5R7Z4_WEIPA
Length = 727
Score = 72.0 bits (175), Expect = 2e-11
Identities = 47/149 (31%), Positives = 76/149 (51%), Gaps = 13/149 (8%)
Frame = +2
Query: 35 NSSIFPSSRRMLRELGRTATVK---AHGRSVLRPVRGPAGRRQVAF----------TGVR 175
N+ I P S ++ ++ R+A V+ A R L P +Q+ + +
Sbjct: 569 NTDIHPESYQVAEKVLRSAAVEKLGADARHALHEFDTPVFAQQLGIGYPTLHDIISSLIE 628
Query: 176 PSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLA 355
P + +AP A + + L+D+K G + +GTV V +FGAFV+ G + +GLVHISKL+
Sbjct: 629 PGRDLRDDAPMATLRSDVLTLDDLKVGMQLQGTVRNVVDFGAFVDIGVHEDGLVHISKLS 688
Query: 356 SGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
KN +V G VTV V +D +++
Sbjct: 689 KQHIKNPHAIVAVGDIVTVWVTEIDKKRQ 717
[135][TOP]
>UniRef100_C3FXH2 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1 RepID=C3FXH2_BACTU
Length = 722
Score = 72.0 bits (175), Expect = 2e-11
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[136][TOP]
>UniRef100_C3BWR5 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1 RepID=C3BWR5_BACTU
Length = 722
Score = 72.0 bits (175), Expect = 2e-11
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[137][TOP]
>UniRef100_C2VN38 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus Rock3-42
RepID=C2VN38_BACCE
Length = 722
Score = 72.0 bits (175), Expect = 2e-11
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[138][TOP]
>UniRef100_C2UPY9 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus Rock3-28
RepID=C2UPY9_BACCE
Length = 722
Score = 72.0 bits (175), Expect = 2e-11
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED++ G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLQRGMELEGTVRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[139][TOP]
>UniRef100_C2TRT2 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=3 Tax=Bacillus cereus RepID=C2TRT2_BACCE
Length = 722
Score = 72.0 bits (175), Expect = 2e-11
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED++ G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLQRGMELEGTVRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[140][TOP]
>UniRef100_C2QME8 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus ATCC 4342
RepID=C2QME8_BACCE
Length = 722
Score = 72.0 bits (175), Expect = 2e-11
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[141][TOP]
>UniRef100_C2Q6H0 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus R309803
RepID=C2Q6H0_BACCE
Length = 722
Score = 72.0 bits (175), Expect = 2e-11
Identities = 36/70 (51%), Positives = 48/70 (68%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL++ + K+ D+V GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSTQYVKHPLDIVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[142][TOP]
>UniRef100_C2MF83 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus m1293 RepID=C2MF83_BACCE
Length = 722
Score = 72.0 bits (175), Expect = 2e-11
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[143][TOP]
>UniRef100_C1XJG4 Polyribonucleotide nucleotidyltransferase (Polynucleotide
phosphorylase) n=1 Tax=Meiothermus ruber DSM 1279
RepID=C1XJG4_MEIRU
Length = 714
Score = 72.0 bits (175), Expect = 2e-11
Identities = 51/148 (34%), Positives = 80/148 (54%), Gaps = 12/148 (8%)
Frame = +2
Query: 29 SLNSSIFPSSRRMLR-ELGRTATVKAHGRSVLRPVRGPAGR--RQVAFTGVR------PS 181
SL P+ R ++ + R T+K + + + GP G+ RQ+ GV +
Sbjct: 545 SLMERAVPTHRAEMKPHVPRILTLKVNPDKI-GGIIGPGGKNIRQLEELGVEIDIEQDGT 603
Query: 182 VRVFAEAPAAEQAAKAIKL---EDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
+R+++ + AA + AKA L + K G YEGTVT + FGAF+ +GL+HIS+L
Sbjct: 604 IRLYSASAAAAEEAKARILGQTAEAKVGEIYEGTVTRITNFGAFIEILPGKDGLLHISQL 663
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAE 436
A G + +DV+ GQK+ VKV S+D +
Sbjct: 664 AQGRVQKVEDVLSLGQKIKVKVNSIDEQ 691
[144][TOP]
>UniRef100_B7RVW5 S1 RNA binding domain protein n=1 Tax=marine gamma proteobacterium
HTCC2148 RepID=B7RVW5_9GAMM
Length = 772
Score = 72.0 bits (175), Expect = 2e-11
Identities = 35/70 (50%), Positives = 47/70 (67%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
K+ D++ EGTVT V FGAF++ G + +GLVHIS LA F K+ +DVV+ G V V
Sbjct: 644 KISDLRPDMVLEGTVTNVTNFGAFIDIGVHQDGLVHISALAEKFVKDPRDVVKAGDVVRV 703
Query: 413 KVLSVDAEKK 442
KV+ VDA +K
Sbjct: 704 KVMEVDAPRK 713
[145][TOP]
>UniRef100_B7DS68 Polyribonucleotide nucleotidyltransferase n=1 Tax=Alicyclobacillus
acidocaldarius LAA1 RepID=B7DS68_9BACL
Length = 735
Score = 72.0 bits (175), Expect = 2e-11
Identities = 50/128 (39%), Positives = 68/128 (53%), Gaps = 12/128 (9%)
Frame = +2
Query: 83 RTATVKAHGRSVLRPVRGPAGR---RQVAFTGVRPSV----RVFAEAPAAEQAAKAIKL- 238
R TVK H + R V GP GR + + TGV+ + RV+ + AEQA +A ++
Sbjct: 550 RVITVKIHPDKI-RDVIGPGGRVINKIIEETGVKIDIEQDGRVYIHSTDAEQANRAREMV 608
Query: 239 ----EDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKV 406
DV+ G+ Y G VT VE++GAFV GLVHIS+L +DV Q G +
Sbjct: 609 ENIVRDVEVGATYTGKVTRVEKYGAFVEILPGKEGLVHISQLDLNRVAKVEDVCQVGDTL 668
Query: 407 TVKVLSVD 430
TVKV +D
Sbjct: 669 TVKVTEID 676
[146][TOP]
>UniRef100_B7HRZ4 S1 RNA binding domain protein n=4 Tax=Bacillus cereus
RepID=B7HRZ4_BACC7
Length = 724
Score = 72.0 bits (175), Expect = 2e-11
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 644 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 703
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 704 VWVDDIDTKK 713
[147][TOP]
>UniRef100_B4X3W4 S1 RNA binding domain protein n=1 Tax=Alcanivorax sp. DG881
RepID=B4X3W4_9GAMM
Length = 791
Score = 72.0 bits (175), Expect = 2e-11
Identities = 40/85 (47%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Frame = +2
Query: 203 PAAEQAAKAIK-----LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFT 367
P E A A+K L+D+K+ EGTVT V FGAFV+ G + +GLVH+S LA F
Sbjct: 628 PRPEFKAAALKEGVETLKDLKQSMILEGTVTNVTNFGAFVDIGVHQDGLVHVSALADKFV 687
Query: 368 KNAKDVVQPGQKVTVKVLSVDAEKK 442
++ VV PG V VKVL VD ++K
Sbjct: 688 EDPHQVVAPGDIVKVKVLDVDLDRK 712
[148][TOP]
>UniRef100_A0R8V4 Transcription accessory protein, S1 RNA-binding domain n=19
Tax=Bacillus cereus group RepID=A0R8V4_BACAH
Length = 724
Score = 72.0 bits (175), Expect = 2e-11
Identities = 37/70 (52%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 644 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 703
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 704 VWVDDIDTKK 713
[149][TOP]
>UniRef100_UPI0001B4D0A3 transcriptional accessory protein n=1 Tax=Streptomyces lividans TK24
RepID=UPI0001B4D0A3
Length = 780
Score = 71.6 bits (174), Expect = 2e-11
Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Frame = +2
Query: 29 SLNSSIFPSSRRMLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAE--- 199
S++ +P RRM++ G+ + SVLR ++ R V T P+V
Sbjct: 569 SVHPEAYPVVRRMVKTAGQEVSGLIGNTSVLRSLKPD---RFVDETFGLPTVTDILRELE 625
Query: 200 ------APAAEQAA---KAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
PA + A K+ D+ G EG VT V FGAFV+ G + +GLVH+S +
Sbjct: 626 KPGRDPRPAFKTATFKEGVEKISDLSSGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAM 685
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
+ F K+ +DVV+PG V VKV+ VD +K
Sbjct: 686 SRTFVKDPRDVVKPGDIVKVKVMDVDIPRK 715
[150][TOP]
>UniRef100_UPI0001AF29A2 putative transcription accessory protein n=1 Tax=Streptomyces
roseosporus NRRL 11379 RepID=UPI0001AF29A2
Length = 771
Score = 71.6 bits (174), Expect = 2e-11
Identities = 35/70 (50%), Positives = 47/70 (67%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
KL D++ G EG VT V FGAFV+ G + +GLVH+S L+ F K+ +DVV+PG V V
Sbjct: 646 KLGDLEPGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSALSKTFVKDPRDVVKPGDIVKV 705
Query: 413 KVLSVDAEKK 442
KV+ VD +K
Sbjct: 706 KVMDVDVPRK 715
[151][TOP]
>UniRef100_Q9X7P9 Putative transcriptional accessory protein n=1 Tax=Streptomyces
coelicolor RepID=Q9X7P9_STRCO
Length = 780
Score = 71.6 bits (174), Expect = 2e-11
Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 12/150 (8%)
Frame = +2
Query: 29 SLNSSIFPSSRRMLRELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAE--- 199
S++ +P RRM++ G+ + SVLR ++ R V T P+V
Sbjct: 569 SVHPEAYPVVRRMVKTAGQEVSGLIGNTSVLRSLKPD---RFVDETFGLPTVTDILRELE 625
Query: 200 ------APAAEQAA---KAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
PA + A K+ D+ G EG VT V FGAFV+ G + +GLVH+S +
Sbjct: 626 KPGRDPRPAFKTATFKEGVEKISDLSSGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAM 685
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
+ F K+ +DVV+PG V VKV+ VD +K
Sbjct: 686 SRTFVKDPRDVVKPGDIVKVKVMDVDIPRK 715
[152][TOP]
>UniRef100_Q21CQ2 RNA binding S1 n=1 Tax=Rhodopseudomonas palustris BisB18
RepID=Q21CQ2_RHOPB
Length = 782
Score = 71.6 bits (174), Expect = 2e-11
Identities = 35/69 (50%), Positives = 47/69 (68%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
L+D+K G EG VT V FGAFV+ G + +GLVHIS ++ F K+ ++VV+PG V VK
Sbjct: 647 LKDLKPGMVLEGAVTNVAAFGAFVDIGVHQDGLVHISAMSRSFIKDPREVVKPGDIVKVK 706
Query: 416 VLSVDAEKK 442
VL VD +K
Sbjct: 707 VLEVDVARK 715
[153][TOP]
>UniRef100_Q11LK4 RNA binding S1 n=1 Tax=Chelativorans sp. BNC1 RepID=Q11LK4_MESSB
Length = 772
Score = 71.6 bits (174), Expect = 2e-11
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 19/153 (12%)
Frame = +2
Query: 38 SSIFPSSRRMLRELGRTATVKAHGRSVLRPVRGPAGRRQV----AFTGVR---PSVR-VF 193
S++ P + + R + V A GR V R + G +G + F R P+VR +
Sbjct: 565 SAVHPEAYHLARRI-----VAACGRDV-RSLMGDSGALKALDPRVFADERFGLPTVRDII 618
Query: 194 AEA--------PAAEQAAKAIKLEDVKE---GSEYEGTVTTVEEFGAFVNFGANTNGLVH 340
AE PA A A ++D+K+ G EGTVT V FGAFV+ G + +GLVH
Sbjct: 619 AELEKPGRDPRPAFRTATFADGIDDIKDLKPGMMLEGTVTNVAAFGAFVDIGVHQDGLVH 678
Query: 341 ISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
+S+LA+ F K+A +VV+ G V V+VL VD ++
Sbjct: 679 VSQLANRFVKDAHEVVKAGDVVKVRVLEVDIKR 711
[154][TOP]
>UniRef100_B9JAJ3 RNA-binding domain S1-containing transcriptional regulator n=1
Tax=Agrobacterium radiobacter K84 RepID=B9JAJ3_AGRRK
Length = 769
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/70 (48%), Positives = 49/70 (70%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
++ D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+ ++V+ G V V
Sbjct: 643 EISDLKPGMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEIVKAGDVVKV 702
Query: 413 KVLSVDAEKK 442
KV+ VDA++K
Sbjct: 703 KVVDVDAKRK 712
[155][TOP]
>UniRef100_B5E861 RNA binding S1 domain protein n=1 Tax=Geobacter bemidjiensis Bem
RepID=B5E861_GEOBB
Length = 754
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/71 (47%), Positives = 49/71 (69%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+ + D+KEG +G VT V FGAFV+ G + +GLVH+S+L+ FTK+ D V+ G+ V
Sbjct: 639 VTIADLKEGMILQGVVTNVAAFGAFVDIGVHQDGLVHVSQLSHRFTKDPNDAVKVGEIVK 698
Query: 410 VKVLSVDAEKK 442
VK+LS D E+K
Sbjct: 699 VKLLSADPERK 709
[156][TOP]
>UniRef100_B1VTW9 Putative transcription accessory protein n=1 Tax=Streptomyces
griseus subsp. griseus NBRC 13350 RepID=B1VTW9_STRGG
Length = 843
Score = 71.6 bits (174), Expect = 2e-11
Identities = 35/70 (50%), Positives = 47/70 (67%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
KL D++ G EG VT V FGAFV+ G + +GLVH+S L+ F K+ +DVV+PG V V
Sbjct: 679 KLGDLEPGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSALSKTFVKDPRDVVKPGDIVKV 738
Query: 413 KVLSVDAEKK 442
KV+ VD +K
Sbjct: 739 KVMDVDVPRK 748
[157][TOP]
>UniRef100_A1R3T9 Putative transcriptional accessory protein n=1 Tax=Arthrobacter
aurescens TC1 RepID=A1R3T9_ARTAT
Length = 818
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
K+ D+K G EGTVT V FGAFV+ G + +GLVH+S L++ F + +++V+ GQ V V
Sbjct: 652 KISDLKPGMILEGTVTNVAAFGAFVDVGVHQDGLVHVSALSNKFVSDPREIVKSGQVVRV 711
Query: 413 KVLSVDAEKK 442
KVL D E+K
Sbjct: 712 KVLEADPERK 721
[158][TOP]
>UniRef100_C9BPK0 RNA binding protein S1 n=7 Tax=Enterococcus faecium
RepID=C9BPK0_ENTFC
Length = 726
Score = 71.6 bits (174), Expect = 2e-11
Identities = 38/81 (46%), Positives = 48/81 (59%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E PA + +ED+K G E GTV V +FGAFV+ G +GLVHISKL+ F K+
Sbjct: 633 EMPAPLLRTDVLSMEDLKPGMELTGTVRNVIDFGAFVDIGVKQDGLVHISKLSKKFVKHP 692
Query: 377 KDVVQPGQKVTVKVLSVDAEK 439
DVV G VTV + VD +K
Sbjct: 693 TDVVSVGDIVTVWIEQVDTKK 713
[159][TOP]
>UniRef100_C9B562 RNA binding protein S1 n=1 Tax=Enterococcus faecium 1,231,501
RepID=C9B562_ENTFC
Length = 726
Score = 71.6 bits (174), Expect = 2e-11
Identities = 38/81 (46%), Positives = 48/81 (59%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E PA + +ED+K G E GTV V +FGAFV+ G +GLVHISKL+ F K+
Sbjct: 633 EMPAPLLRTDVLSMEDLKPGMELTGTVRNVIDFGAFVDIGVKQDGLVHISKLSKKFVKHP 692
Query: 377 KDVVQPGQKVTVKVLSVDAEK 439
DVV G VTV + VD +K
Sbjct: 693 TDVVSVGDIVTVWIEQVDTKK 713
[160][TOP]
>UniRef100_C4WBM3 Protein YhgF n=1 Tax=Staphylococcus warneri L37603
RepID=C4WBM3_STAWA
Length = 716
Score = 71.6 bits (174), Expect = 2e-11
Identities = 33/70 (47%), Positives = 46/70 (65%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+ +ED+ EG + GTV V +FGAFV+ G +GLVH+SKL+ F KN D+V G V
Sbjct: 635 LSIEDLSEGMKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPMDIVSVGDIVD 694
Query: 410 VKVLSVDAEK 439
V +LS+D +K
Sbjct: 695 VWILSIDTQK 704
[161][TOP]
>UniRef100_C3HCT7 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1 RepID=C3HCT7_BACTU
Length = 722
Score = 71.6 bits (174), Expect = 2e-11
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAF++ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFIDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[162][TOP]
>UniRef100_C2YL46 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus AH1271
RepID=C2YL46_BACCE
Length = 656
Score = 71.6 bits (174), Expect = 2e-11
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ D+V GQ V
Sbjct: 576 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDIVSVGQIVK 635
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 636 VWVDDIDTKK 645
[163][TOP]
>UniRef100_C2P9F5 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus MM3 RepID=C2P9F5_BACCE
Length = 722
Score = 71.6 bits (174), Expect = 2e-11
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ D+V GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDIVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[164][TOP]
>UniRef100_C2HBI6 S1 domain RNA-binding protein n=2 Tax=Enterococcus faecium
RepID=C2HBI6_ENTFC
Length = 726
Score = 71.6 bits (174), Expect = 2e-11
Identities = 38/81 (46%), Positives = 48/81 (59%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E PA + +ED+K G E GTV V +FGAFV+ G +GLVHISKL+ F K+
Sbjct: 633 EMPAPLLRTDVLSMEDLKPGMELTGTVRNVIDFGAFVDIGVKQDGLVHISKLSKKFVKHP 692
Query: 377 KDVVQPGQKVTVKVLSVDAEK 439
DVV G VTV + VD +K
Sbjct: 693 TDVVSVGDIVTVWIEQVDTKK 713
[165][TOP]
>UniRef100_C1V3S8 Transcriptional accessory protein n=1 Tax=Haliangium ochraceum DSM
14365 RepID=C1V3S8_9DELT
Length = 801
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/69 (49%), Positives = 49/69 (71%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
LED+K + EG VT V +FGAFV+ G + +GLVHIS+L+ F K+ ++VV+ G K+ V+
Sbjct: 648 LEDLKPEMQLEGVVTNVTDFGAFVDVGVHQDGLVHISQLSDRFVKDPREVVKVGDKIKVR 707
Query: 416 VLSVDAEKK 442
VL VD +K
Sbjct: 708 VLDVDLARK 716
[166][TOP]
>UniRef100_B6G8Z0 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM
13279 RepID=B6G8Z0_9ACTN
Length = 835
Score = 71.6 bits (174), Expect = 2e-11
Identities = 38/82 (46%), Positives = 51/82 (62%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
+AP + A +ED++ G E +GTV V +FGAFV+ G + +GLVHISKLA F K+
Sbjct: 741 DAPEVVFSQAARSIEDLEVGMELKGTVRNVVDFGAFVDIGVHQDGLVHISKLADRFVKHP 800
Query: 377 KDVVQPGQKVTVKVLSVDAEKK 442
+VV G VTV V VD +K
Sbjct: 801 SEVVAVGDTVTVWVTGVDRTRK 822
[167][TOP]
>UniRef100_A4TUT2 Transcriptional accessory protein n=1 Tax=Magnetospirillum
gryphiswaldense RepID=A4TUT2_9PROT
Length = 779
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
++D++ G EG VT V FGAFV+ G + +GLVH+S LA F K+ +VV+PG V+VK
Sbjct: 651 MQDLQPGMILEGVVTNVTNFGAFVDIGVHQDGLVHVSALADRFVKDPHEVVKPGDVVSVK 710
Query: 416 VLSVDAEKK 442
VL VD ++K
Sbjct: 711 VLEVDLKRK 719
[168][TOP]
>UniRef100_B0THS2 Polyribonucleotide nucleotidyltransferase n=1 Tax=Heliobacterium
modesticaldum Ice1 RepID=PNP_HELMI
Length = 709
Score = 71.6 bits (174), Expect = 2e-11
Identities = 45/118 (38%), Positives = 65/118 (55%), Gaps = 12/118 (10%)
Frame = +2
Query: 119 LRPVRGPAGR---RQVAFTGVRPSV----RVFAEAPAAEQAAKAIKL-----EDVKEGSE 262
+R V GP G+ + +A TGV+ + R+F A E A KA+++ DV+ G
Sbjct: 561 IREVIGPGGKVINKIIAETGVKIDIEDDGRIFIAATDTEAANKAVRIIESITADVEVGKV 620
Query: 263 YEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAE 436
Y G VT + FGAFV GL+HIS+LA +DVV+ G +VTVKV+ +D +
Sbjct: 621 YTGKVTRIMNFGAFVEVLPGKEGLIHISQLAEERVAKVEDVVKIGDEVTVKVVEIDKQ 678
[169][TOP]
>UniRef100_UPI0001BB068E Tex-like protein protein-like protein n=1 Tax=Gordonia bronchialis
DSM 43247 RepID=UPI0001BB068E
Length = 815
Score = 71.2 bits (173), Expect = 3e-11
Identities = 37/82 (45%), Positives = 52/82 (63%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E A AA K+ D++ G EG VT V FGAFV+ G + +GLVH+S +A+ F +
Sbjct: 628 EFKTATFAAGIEKVSDLRPGMILEGQVTNVAAFGAFVDVGVHQDGLVHVSAMANRFVSDP 687
Query: 377 KDVVQPGQKVTVKVLSVDAEKK 442
++VV+ G VTVKV+ VD E+K
Sbjct: 688 REVVKSGDIVTVKVMEVDVERK 709
[170][TOP]
>UniRef100_UPI0001B53EE5 transcription accessory protein n=1 Tax=Streptomyces sp. SPB78
RepID=UPI0001B53EE5
Length = 1218
Score = 71.2 bits (173), Expect = 3e-11
Identities = 35/70 (50%), Positives = 47/70 (67%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
KL D++ G EG VT V FGAFV+ G + +GLVH+S L+ F K+ ++VV+PG V V
Sbjct: 626 KLSDLEPGMVLEGVVTNVAAFGAFVDIGVHQDGLVHVSALSREFVKDPREVVKPGDIVKV 685
Query: 413 KVLSVDAEKK 442
KVL VD +K
Sbjct: 686 KVLDVDLPRK 695
[171][TOP]
>UniRef100_UPI0001AF4EAF transcriptional accessory protein Tex n=1 Tax=Mycobacterium
kansasii ATCC 12478 RepID=UPI0001AF4EAF
Length = 753
Score = 71.2 bits (173), Expect = 3e-11
Identities = 36/75 (48%), Positives = 48/75 (64%)
Frame = +2
Query: 218 AAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPG 397
AA K+ D+K G EG VT V FGAFV+ G + +GLVH+S +A F + DVV+ G
Sbjct: 625 AAGVQKIADLKVGMVLEGVVTNVAAFGAFVDIGVHQDGLVHVSAMAERFVADPHDVVRSG 684
Query: 398 QKVTVKVLSVDAEKK 442
Q V VKV+ VD E++
Sbjct: 685 QVVRVKVIDVDVERR 699
[172][TOP]
>UniRef100_UPI00019083B0 probable transcriptional accessory protein (RNA binding S1 domain)
n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI00019083B0
Length = 195
Score = 71.2 bits (173), Expect = 3e-11
Identities = 34/70 (48%), Positives = 49/70 (70%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
++ D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+ +VV+ G V V
Sbjct: 103 EISDLKPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKV 162
Query: 413 KVLSVDAEKK 442
+V+ VDA++K
Sbjct: 163 RVVEVDAKRK 172
[173][TOP]
>UniRef100_UPI0001906521 RNA binding S1 domain protein n=1 Tax=Rhizobium etli Kim 5
RepID=UPI0001906521
Length = 717
Score = 71.2 bits (173), Expect = 3e-11
Identities = 34/70 (48%), Positives = 49/70 (70%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
++ D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+ +VV+ G V V
Sbjct: 643 EISDLKPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKV 702
Query: 413 KVLSVDAEKK 442
+V+ VDA++K
Sbjct: 703 RVVEVDAKRK 712
[174][TOP]
>UniRef100_UPI0001905DA4 probable transcriptional accessory protein (RNA binding S1 domain)
n=1 Tax=Rhizobium etli GR56 RepID=UPI0001905DA4
Length = 256
Score = 71.2 bits (173), Expect = 3e-11
Identities = 34/70 (48%), Positives = 49/70 (70%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
++ D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+ +VV+ G V V
Sbjct: 130 EISDLKPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKV 189
Query: 413 KVLSVDAEKK 442
+V+ VDA++K
Sbjct: 190 RVVEVDAKRK 199
[175][TOP]
>UniRef100_UPI00019042F2 probable transcriptional accessory protein (RNA binding S1 domain)
n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019042F2
Length = 187
Score = 71.2 bits (173), Expect = 3e-11
Identities = 34/70 (48%), Positives = 49/70 (70%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
++ D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+ +VV+ G V V
Sbjct: 61 EISDLKPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKV 120
Query: 413 KVLSVDAEKK 442
+V+ VDA++K
Sbjct: 121 RVVEVDAKRK 130
[176][TOP]
>UniRef100_UPI000185BF30 transcriptional accessory protein n=1 Tax=Corynebacterium
amycolatum SK46 RepID=UPI000185BF30
Length = 763
Score = 71.2 bits (173), Expect = 3e-11
Identities = 34/69 (49%), Positives = 47/69 (68%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
K+ D++ G EGTVT V FGAFV+ G + +GLVH+S +A GF + +VV+ G+ V V
Sbjct: 641 KISDLQPGMILEGTVTNVAAFGAFVDVGVHQDGLVHVSNMARGFVSDPHEVVRSGEVVKV 700
Query: 413 KVLSVDAEK 439
KVL VD E+
Sbjct: 701 KVLDVDVER 709
[177][TOP]
>UniRef100_Q4L7U8 Similar to transcription accessory protein n=1 Tax=Staphylococcus
haemolyticus JCSC1435 RepID=Q4L7U8_STAHJ
Length = 715
Score = 71.2 bits (173), Expect = 3e-11
Identities = 34/70 (48%), Positives = 45/70 (64%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+ +ED+KEG + GTV V +FGAFV+ G +GLVH+SKL+ F KN DVV G V
Sbjct: 634 LSIEDLKEGMKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPMDVVSVGDIVE 693
Query: 410 VKVLSVDAEK 439
V +L +D K
Sbjct: 694 VWILDIDKNK 703
[178][TOP]
>UniRef100_Q2JGI6 RNA binding S1 n=1 Tax=Frankia sp. CcI3 RepID=Q2JGI6_FRASC
Length = 864
Score = 71.2 bits (173), Expect = 3e-11
Identities = 39/90 (43%), Positives = 52/90 (57%)
Frame = +2
Query: 173 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
RP+ R A E A D+ G EGTVT V FGAFV+ G + +GLVH+S +
Sbjct: 641 RPAFRTAAFTEGIETLA------DLVPGMTLEGTVTNVAAFGAFVDIGVHQDGLVHVSAM 694
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
+ F + ++VV+PG VTVKVL VD +K
Sbjct: 695 SKNFVSDPREVVKPGDIVTVKVLDVDIPRK 724
[179][TOP]
>UniRef100_Q1MKQ5 Putative RNA-binding domain transcriptional regulator n=1
Tax=Rhizobium leguminosarum bv. viciae 3841
RepID=Q1MKQ5_RHIL3
Length = 769
Score = 71.2 bits (173), Expect = 3e-11
Identities = 34/70 (48%), Positives = 49/70 (70%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
++ D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+ +VV+ G V V
Sbjct: 643 EISDLKPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKV 702
Query: 413 KVLSVDAEKK 442
+V+ VDA++K
Sbjct: 703 RVVEVDAKRK 712
[180][TOP]
>UniRef100_Q07UL0 RNA binding S1 domain protein n=1 Tax=Rhodopseudomonas palustris
BisA53 RepID=Q07UL0_RHOP5
Length = 784
Score = 71.2 bits (173), Expect = 3e-11
Identities = 38/79 (48%), Positives = 50/79 (63%)
Frame = +2
Query: 206 AAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDV 385
AAE L+D+K G EG VT V FGAFV+ G + +GLVHIS ++ F K+ ++V
Sbjct: 639 AAEFKEGVETLKDLKVGMILEGAVTNVAAFGAFVDIGVHQDGLVHISAMSKTFIKDPREV 698
Query: 386 VQPGQKVTVKVLSVDAEKK 442
V+PG V VKVL VD +K
Sbjct: 699 VKPGDIVKVKVLEVDVARK 717
[181][TOP]
>UniRef100_C6B3G7 RNA binding S1 domain protein n=1 Tax=Rhizobium leguminosarum bv.
trifolii WSM1325 RepID=C6B3G7_RHILS
Length = 769
Score = 71.2 bits (173), Expect = 3e-11
Identities = 34/70 (48%), Positives = 49/70 (70%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
++ D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+ +VV+ G V V
Sbjct: 643 EISDLKPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKV 702
Query: 413 KVLSVDAEKK 442
+V+ VDA++K
Sbjct: 703 RVVEVDAKRK 712
[182][TOP]
>UniRef100_B3PRI3 Probable transcriptional accessory protein (RNA binding S1 domain)
n=1 Tax=Rhizobium etli CIAT 652 RepID=B3PRI3_RHIE6
Length = 769
Score = 71.2 bits (173), Expect = 3e-11
Identities = 34/70 (48%), Positives = 49/70 (70%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
++ D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+ +VV+ G V V
Sbjct: 643 EISDLKPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKV 702
Query: 413 KVLSVDAEKK 442
+V+ VDA++K
Sbjct: 703 RVVEVDAKRK 712
[183][TOP]
>UniRef100_C2W368 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus Rock3-44
RepID=C2W368_BACCE
Length = 722
Score = 71.2 bits (173), Expect = 3e-11
Identities = 38/70 (54%), Positives = 46/70 (65%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRAMELEGTVRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V VD +K
Sbjct: 702 VWVDDVDMKK 711
[184][TOP]
>UniRef100_C0UKG5 Transcriptional accessory protein n=1 Tax=Gordonia bronchialis DSM
43247 RepID=C0UKG5_9ACTO
Length = 852
Score = 71.2 bits (173), Expect = 3e-11
Identities = 37/82 (45%), Positives = 52/82 (63%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E A AA K+ D++ G EG VT V FGAFV+ G + +GLVH+S +A+ F +
Sbjct: 665 EFKTATFAAGIEKVSDLRPGMILEGQVTNVAAFGAFVDVGVHQDGLVHVSAMANRFVSDP 724
Query: 377 KDVVQPGQKVTVKVLSVDAEKK 442
++VV+ G VTVKV+ VD E+K
Sbjct: 725 REVVKSGDIVTVKVMEVDVERK 746
[185][TOP]
>UniRef100_UPI0001BB916D conserved hypothetical protein n=1 Tax=Acinetobacter johnsonii
SH046 RepID=UPI0001BB916D
Length = 788
Score = 70.9 bits (172), Expect = 4e-11
Identities = 35/69 (50%), Positives = 49/69 (71%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
++ + EG + EG VT V FGAFV+ G + +GLVHIS+LA+ F + VV+PGQ V V
Sbjct: 640 EVAQLTEGMQLEGVVTNVTNFGAFVDVGVHQDGLVHISELANEFVADPHKVVKPGQIVQV 699
Query: 413 KVLSVDAEK 439
+VL+VDAE+
Sbjct: 700 RVLTVDAER 708
[186][TOP]
>UniRef100_UPI00003847A9 COG2183: Transcriptional accessory protein n=1 Tax=Magnetospirillum
magnetotacticum MS-1 RepID=UPI00003847A9
Length = 784
Score = 70.9 bits (172), Expect = 4e-11
Identities = 36/69 (52%), Positives = 46/69 (66%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
L D+K G EG VT V FGAFV+ G + +GLVHIS LA F K+ +VV+PG V VK
Sbjct: 659 LNDLKPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISVLADRFVKDPHEVVKPGDLVKVK 718
Query: 416 VLSVDAEKK 442
VL VD +++
Sbjct: 719 VLEVDLKRQ 727
[187][TOP]
>UniRef100_Q82MJ1 Putative transcription accessory protein n=1 Tax=Streptomyces
avermitilis RepID=Q82MJ1_STRAW
Length = 810
Score = 70.9 bits (172), Expect = 4e-11
Identities = 33/70 (47%), Positives = 46/70 (65%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
K+ D+ G EG VT V FGAFV+ G + +GLVH+S ++ F K+ +DVV+PG V V
Sbjct: 648 KISDLASGMVLEGVVTNVAAFGAFVDIGVHQDGLVHVSAMSKTFVKDPRDVVKPGDIVKV 707
Query: 413 KVLSVDAEKK 442
KVL +D +K
Sbjct: 708 KVLDIDIPRK 717
[188][TOP]
>UniRef100_C5D4D6 RNA binding S1 domain protein n=1 Tax=Geobacillus sp. WCH70
RepID=C5D4D6_GEOSW
Length = 728
Score = 70.9 bits (172), Expect = 4e-11
Identities = 39/90 (43%), Positives = 52/90 (57%)
Frame = +2
Query: 170 VRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISK 349
+RP E P +K+ED+K G E EGTV V +FGAFV+ G +GLVHISK
Sbjct: 620 IRPERDPRDELPKPLLRKDILKMEDLKRGMELEGTVRNVVDFGAFVDIGVKQDGLVHISK 679
Query: 350 LASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
L+ + ++ DVV G V V V +VD +K
Sbjct: 680 LSKQYVRHPLDVVSVGDVVKVWVDNVDLDK 709
[189][TOP]
>UniRef100_B4SMQ1 RNA binding S1 domain protein n=1 Tax=Stenotrophomonas maltophilia
R551-3 RepID=B4SMQ1_STRM5
Length = 795
Score = 70.9 bits (172), Expect = 4e-11
Identities = 37/82 (45%), Positives = 51/82 (62%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E AA A ++D++EG EG V+ V FGAFV+ G + +GL+HIS L+ F K+
Sbjct: 641 EFKAARFAEGVEDIKDLREGMVLEGVVSNVAAFGAFVDIGVHQDGLIHISALSDTFVKDP 700
Query: 377 KDVVQPGQKVTVKVLSVDAEKK 442
+DVV+ G V VKVL VD +K
Sbjct: 701 RDVVKAGDIVKVKVLEVDVARK 722
[190][TOP]
>UniRef100_B2FJD5 Putative transcription accessory protein n=1 Tax=Stenotrophomonas
maltophilia K279a RepID=B2FJD5_STRMK
Length = 795
Score = 70.9 bits (172), Expect = 4e-11
Identities = 37/82 (45%), Positives = 51/82 (62%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E AA A ++D++EG EG V+ V FGAFV+ G + +GL+HIS L+ F K+
Sbjct: 641 EFKAARFAEGVEDIKDLREGMVLEGVVSNVAAFGAFVDIGVHQDGLIHISALSDTFVKDP 700
Query: 377 KDVVQPGQKVTVKVLSVDAEKK 442
+DVV+ G V VKVL VD +K
Sbjct: 701 RDVVKAGDIVKVKVLEVDVARK 722
[191][TOP]
>UniRef100_A8MJM7 RNA binding S1 domain protein n=1 Tax=Alkaliphilus oremlandii
OhILAs RepID=A8MJM7_ALKOO
Length = 718
Score = 70.9 bits (172), Expect = 4e-11
Identities = 35/81 (43%), Positives = 51/81 (62%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E P + +K+ED+K GTV V +FGAFV+ G +GLVH+S+L++ F KNA
Sbjct: 627 EMPKPLFKSDVLKMEDLKLDMIMPGTVRNVVDFGAFVDIGVKQDGLVHVSELSNRFVKNA 686
Query: 377 KDVVQPGQKVTVKVLSVDAEK 439
DVV G +V VK++ +D E+
Sbjct: 687 MDVVSVGDEVKVKIIGLDIER 707
[192][TOP]
>UniRef100_A7NJ51 RNA binding S1 domain protein n=1 Tax=Roseiflexus castenholzii DSM
13941 RepID=A7NJ51_ROSCS
Length = 503
Score = 70.9 bits (172), Expect = 4e-11
Identities = 36/68 (52%), Positives = 45/68 (66%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
KL ++ G EGTVT + FG FV+ G +GLVH+S+LA G + A+DVVQ GQ T
Sbjct: 231 KLAALRVGDNVEGTVTGLAPFGVFVDIGVGKDGLVHVSELAEGRVEKAEDVVQVGQTYTF 290
Query: 413 KVLSVDAE 436
KVL VDAE
Sbjct: 291 KVLEVDAE 298
Score = 64.7 bits (156), Expect = 3e-09
Identities = 31/76 (40%), Positives = 49/76 (64%)
Frame = +2
Query: 215 QAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQP 394
+A + KL+ +++G EGT++ + FGAFV+ G +GLVHIS+L++ +D V+
Sbjct: 308 RAQRGQKLQQLEKGQILEGTISGLAPFGAFVDIGVGRDGLVHISELSNARVARVEDAVKV 367
Query: 395 GQKVTVKVLSVDAEKK 442
G KV V+VL VD + K
Sbjct: 368 GDKVQVRVLDVDPQSK 383
Score = 60.5 bits (145), Expect = 6e-08
Identities = 34/103 (33%), Positives = 57/103 (55%), Gaps = 3/103 (2%)
Frame = +2
Query: 137 PAGRRQVAFTGVRPSVRVFA---EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFV 307
P G +VA P+ A +APA + +++D+ G E EG VT++ +G FV
Sbjct: 97 PTGSAEVAPEAAAPAGTAEAASYQAPAEAPTGRPRRVKDLAPGMELEGRVTSIALYGIFV 156
Query: 308 NFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAE 436
+ G +GLVHIS+++ ++ D+V+ G V V+V SV+ +
Sbjct: 157 DIGVGRDGLVHISEMSDTRIESPSDLVKIGDTVKVRVKSVEPD 199
[193][TOP]
>UniRef100_A1WZ97 RNA binding S1 domain protein n=1 Tax=Halorhodospira halophila SL1
RepID=A1WZ97_HALHL
Length = 798
Score = 70.9 bits (172), Expect = 4e-11
Identities = 39/90 (43%), Positives = 53/90 (58%)
Frame = +2
Query: 173 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
RP R A E K++D++ G EGTVT V FGAFV+ G + +GLVHIS L
Sbjct: 642 RPEFRTAAFREGVE------KIQDLEPGMVLEGTVTNVANFGAFVDIGVHQDGLVHISAL 695
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
A F ++ +D V+ G V VKV+ VD E++
Sbjct: 696 AHEFVRDPRDKVRTGDVVQVKVMEVDLERQ 725
[194][TOP]
>UniRef100_A1TSP0 RNA binding S1 domain protein n=1 Tax=Acidovorax citrulli AAC00-1
RepID=A1TSP0_ACIAC
Length = 788
Score = 70.9 bits (172), Expect = 4e-11
Identities = 33/69 (47%), Positives = 50/69 (72%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
+ D+KEG EGTV+ V +FGAFV+ G + +GLVH+S+L+ F ++A+++V+ G V VK
Sbjct: 658 IADLKEGMVLEGTVSNVAQFGAFVDLGVHQDGLVHVSQLSHKFVQDAREIVKTGDIVKVK 717
Query: 416 VLSVDAEKK 442
VL VD +K
Sbjct: 718 VLEVDPVRK 726
[195][TOP]
>UniRef100_A5IUK9 RNA binding S1 domain protein n=13 Tax=Staphylococcus aureus
RepID=A5IUK9_STAA9
Length = 716
Score = 70.9 bits (172), Expect = 4e-11
Identities = 34/70 (48%), Positives = 45/70 (64%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+ +ED+KEG + GTV V +FGAFV+ G +GLVH+SKL+ F KN D+V G V
Sbjct: 635 LSIEDLKEGMKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPMDIVSVGDIVD 694
Query: 410 VKVLSVDAEK 439
V V S+D K
Sbjct: 695 VWVYSIDKNK 704
[196][TOP]
>UniRef100_C0AEY5 RNA binding S1 domain protein (Fragment) n=1 Tax=Opitutaceae
bacterium TAV2 RepID=C0AEY5_9BACT
Length = 788
Score = 70.9 bits (172), Expect = 4e-11
Identities = 34/66 (51%), Positives = 46/66 (69%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
K ED+K G + G VT V FGAFV+ G + +GLVH+S+L+ F K+A +VV+PGQKV
Sbjct: 679 KPEDLKPGMKLPGIVTNVTAFGAFVDVGVHQDGLVHVSQLSDTFVKDASEVVKPGQKVRA 738
Query: 413 KVLSVD 430
V+ VD
Sbjct: 739 TVIEVD 744
[197][TOP]
>UniRef100_Q2J2J4 Polyribonucleotide nucleotidyltransferase n=1 Tax=Rhodopseudomonas
palustris HaA2 RepID=PNP_RHOP2
Length = 718
Score = 70.9 bits (172), Expect = 4e-11
Identities = 48/120 (40%), Positives = 60/120 (50%), Gaps = 12/120 (10%)
Frame = +2
Query: 119 LRPVRGPAG---RRQVAFTGVRPSVRVFAEAPAAEQAAKAIKL---------EDVKEGSE 262
+R V G G R V TG + ++ A ++IK D + G
Sbjct: 566 IREVIGTGGKVIREIVEKTGAKVNIEDDGTVKVASSDGESIKAAIKWIKSIASDPEVGEI 625
Query: 263 YEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
YEGTV V EFGAFVNF +GLVHIS+LASG + DVV+ G KV VK+L D K
Sbjct: 626 YEGTVVKVMEFGAFVNFFGAKDGLVHISQLASGRVQKTSDVVKEGDKVKVKLLGFDDRGK 685
[198][TOP]
>UniRef100_C6RQH0 Transcriptional accessory protein n=2 Tax=Acinetobacter
radioresistens RepID=C6RQH0_ACIRA
Length = 785
Score = 70.5 bits (171), Expect = 6e-11
Identities = 33/68 (48%), Positives = 48/68 (70%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
++ + EG + EG VT V FGAFV+ G + +GLVHIS+LA+ F + +V+PGQ V V+
Sbjct: 636 VKQLTEGMQLEGVVTNVTNFGAFVDIGVHQDGLVHISELANEFVSDPHKIVKPGQIVQVR 695
Query: 416 VLSVDAEK 439
V+ VDAE+
Sbjct: 696 VIQVDAER 703
[199][TOP]
>UniRef100_UPI0001B4A059 RNA-binding protein n=1 Tax=Bacteroides sp. 2_1_7
RepID=UPI0001B4A059
Length = 708
Score = 70.5 bits (171), Expect = 6e-11
Identities = 40/90 (44%), Positives = 51/90 (56%)
Frame = +2
Query: 173 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
R +++VFA P + +ED+KEG G VT + FG FV+ G NGLVHIS+L
Sbjct: 616 RQTIQVFAFDPTVKT------IEDLKEGQVLPGIVTNITNFGCFVDVGIKENGLVHISEL 669
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
A F + VV Q V VKVLSVD +K
Sbjct: 670 ADRFVSDPTQVVSIHQHVKVKVLSVDLSRK 699
[200][TOP]
>UniRef100_Q98HG3 Mll2881 protein n=1 Tax=Mesorhizobium loti RepID=Q98HG3_RHILO
Length = 774
Score = 70.5 bits (171), Expect = 6e-11
Identities = 34/69 (49%), Positives = 49/69 (71%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
++D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+A +VV+ G V V+
Sbjct: 647 IKDLKPGMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFIKDAHEVVKAGDVVKVR 706
Query: 416 VLSVDAEKK 442
V+ VD ++K
Sbjct: 707 VVDVDIKRK 715
[201][TOP]
>UniRef100_Q2W1Q4 TEX protein n=1 Tax=Magnetospirillum magneticum AMB-1
RepID=Q2W1Q4_MAGSA
Length = 787
Score = 70.5 bits (171), Expect = 6e-11
Identities = 36/68 (52%), Positives = 45/68 (66%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
L D+K G EG VT V FGAFV+ G + +GLVHIS LA F K+ +VV+PG V VK
Sbjct: 659 LNDLKPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISVLADRFVKDPHEVVKPGDLVKVK 718
Query: 416 VLSVDAEK 439
VL VD ++
Sbjct: 719 VLEVDIKR 726
[202][TOP]
>UniRef100_C3PAU1 S1 RNA binding domain protein n=2 Tax=Bacillus anthracis
RepID=C3PAU1_BACAA
Length = 722
Score = 70.5 bits (171), Expect = 6e-11
Identities = 36/70 (51%), Positives = 46/70 (65%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+KLED+K G E EGT V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTARNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 702 VWVDDIDTKK 711
[203][TOP]
>UniRef100_C1B2S2 Transcriptional accessory protein n=1 Tax=Rhodococcus opacus B4
RepID=C1B2S2_RHOOB
Length = 807
Score = 70.5 bits (171), Expect = 6e-11
Identities = 37/82 (45%), Positives = 50/82 (60%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E A AA K+ +K G EG VT V FGAFV+ G + +GLVH+S ++ F K+
Sbjct: 621 EFKTATFAAGIEKVSHLKPGMTLEGVVTNVAAFGAFVDIGVHQDGLVHVSAMSHNFVKDP 680
Query: 377 KDVVQPGQKVTVKVLSVDAEKK 442
+DVV+ G VTVKVL VD ++
Sbjct: 681 RDVVKSGDVVTVKVLEVDEARQ 702
[204][TOP]
>UniRef100_A6TLF6 RNA binding S1 domain protein n=1 Tax=Alkaliphilus metalliredigens
QYMF RepID=A6TLF6_ALKMQ
Length = 728
Score = 70.5 bits (171), Expect = 6e-11
Identities = 34/81 (41%), Positives = 50/81 (61%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E P + +K+ED+K GTV V +FGAFV+ G +GLVH+S+L++ F KN
Sbjct: 637 EMPMPIFRSDVLKMEDLKLDMVMTGTVRNVVDFGAFVDIGVKQDGLVHVSQLSNKFVKNP 696
Query: 377 KDVVQPGQKVTVKVLSVDAEK 439
DVV G +V VK++ +D E+
Sbjct: 697 MDVVSVGDEVEVKIIGIDVER 717
[205][TOP]
>UniRef100_Q1ZC98 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3
RepID=Q1ZC98_9GAMM
Length = 723
Score = 70.5 bits (171), Expect = 6e-11
Identities = 33/70 (47%), Positives = 50/70 (71%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
K+ D+ E +G +T V FGAFV+ G + +GL+H+S+LA+ F K+ +VV+ GQ V V
Sbjct: 641 KISDLYTDMEIQGVITNVTSFGAFVDIGVHQDGLIHLSQLANKFVKDPFEVVKTGQIVQV 700
Query: 413 KVLSVDAEKK 442
+VLSVD+E+K
Sbjct: 701 RVLSVDSERK 710
[206][TOP]
>UniRef100_D0CP90 Protein YhgF n=1 Tax=Silicibacter lacuscaerulensis ITI-1157
RepID=D0CP90_9RHOB
Length = 810
Score = 70.5 bits (171), Expect = 6e-11
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
++ D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+ +VV+ GQ V V
Sbjct: 681 EITDLKPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSELADRFVKDPHEVVKAGQVVRV 740
Query: 413 KVLSVDAEKK 442
+V+ VD +K
Sbjct: 741 RVVEVDVPRK 750
[207][TOP]
>UniRef100_D0C0W2 Transcriptional accessory protein n=1 Tax=Acinetobacter sp. RUH2624
RepID=D0C0W2_9GAMM
Length = 795
Score = 70.5 bits (171), Expect = 6e-11
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
++ + EG + EG VT V FGAFV+ G + +GLVHIS+LA+ F + VV+PGQ V V
Sbjct: 647 EVAQLTEGMQLEGVVTNVTNFGAFVDIGVHQDGLVHISELANEFVSDPHKVVKPGQIVQV 706
Query: 413 KVLSVDAEK 439
+V+ VDAE+
Sbjct: 707 RVMQVDAER 715
[208][TOP]
>UniRef100_C8ZYG0 RNA binding protein S1 n=1 Tax=Enterococcus gallinarum EG2
RepID=C8ZYG0_ENTGA
Length = 727
Score = 70.5 bits (171), Expect = 6e-11
Identities = 37/81 (45%), Positives = 48/81 (59%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E PA + +ED++ G E GTV V +FGAFV+ G +GLVH+SKL+ F K+
Sbjct: 633 EMPAPLLRKDVLSMEDLRPGMELMGTVRNVIDFGAFVDIGVKQDGLVHLSKLSRNFVKHP 692
Query: 377 KDVVQPGQKVTVKVLSVDAEK 439
KDVV G VTV + VD K
Sbjct: 693 KDVVAVGDIVTVWIEQVDTTK 713
[209][TOP]
>UniRef100_C8MC48 S1 domain RNA-binding protein n=1 Tax=Staphylococcus aureus A9635
RepID=C8MC48_STAAU
Length = 716
Score = 70.5 bits (171), Expect = 6e-11
Identities = 33/70 (47%), Positives = 45/70 (64%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+ +ED+KEG + GTV V +FGAFV+ G +GLVH+SKL+ F KN D+V G V
Sbjct: 635 LSIEDLKEGMKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPMDIVSVGDIVD 694
Query: 410 VKVLSVDAEK 439
V + S+D K
Sbjct: 695 VWIYSIDKNK 704
[210][TOP]
>UniRef100_C7XAY7 RNA-binding protein n=1 Tax=Parabacteroides sp. D13
RepID=C7XAY7_9PORP
Length = 708
Score = 70.5 bits (171), Expect = 6e-11
Identities = 40/90 (44%), Positives = 51/90 (56%)
Frame = +2
Query: 173 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
R +++VFA P + +ED+KEG G VT + FG FV+ G NGLVHIS+L
Sbjct: 616 RQTIQVFAFDPTVKT------IEDLKEGQVLPGIVTNITNFGCFVDVGIKENGLVHISEL 669
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
A F + VV Q V VKVLSVD +K
Sbjct: 670 ADRFVSDPTQVVSIHQHVKVKVLSVDLSRK 699
[211][TOP]
>UniRef100_C5S7F4 RNA binding S1 domain protein n=1 Tax=Allochromatium vinosum DSM
180 RepID=C5S7F4_CHRVI
Length = 781
Score = 70.5 bits (171), Expect = 6e-11
Identities = 36/69 (52%), Positives = 47/69 (68%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
L+D++ G EGTVT V FGAFV+ G + +GLVHIS L+ F K+ +VV+ G V VK
Sbjct: 642 LKDLEPGMILEGTVTNVTNFGAFVDIGVHQDGLVHISVLSDRFVKDPHEVVKSGDLVKVK 701
Query: 416 VLSVDAEKK 442
VL VD E+K
Sbjct: 702 VLEVDLERK 710
[212][TOP]
>UniRef100_C4EGE5 Transcriptional accessory protein n=1 Tax=Streptosporangium roseum
DSM 43021 RepID=C4EGE5_STRRS
Length = 797
Score = 70.5 bits (171), Expect = 6e-11
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
KL D+ G EG VT V FGAFV+ G + +GLVH+S L+ F K+ ++VV+PG V V
Sbjct: 636 KLSDLTPGMLLEGVVTNVAAFGAFVDVGVHQDGLVHVSALSHNFVKDPREVVKPGDIVRV 695
Query: 413 KVLSVDAEKK 442
KVL VD +K
Sbjct: 696 KVLDVDIPRK 705
[213][TOP]
>UniRef100_A1ZG34 S1 RNA binding domain protein n=1 Tax=Microscilla marina ATCC 23134
RepID=A1ZG34_9SPHI
Length = 764
Score = 70.5 bits (171), Expect = 6e-11
Identities = 37/83 (44%), Positives = 52/83 (62%)
Frame = +2
Query: 194 AEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKN 373
A+ E A +ED+K G + G VT V +FGAFV+ G + +GLVHIS+L++ F +
Sbjct: 618 AKFEVVEFAEGVNTIEDLKTGMKLNGVVTNVTKFGAFVDIGVHQDGLVHISELSNTFVSD 677
Query: 374 AKDVVQPGQKVTVKVLSVDAEKK 442
+VV+ QKV V VL VD E+K
Sbjct: 678 PNEVVKVQQKVEVMVLDVDVERK 700
[214][TOP]
>UniRef100_UPI0001BBAFC1 RNA-binding protein n=1 Tax=Bacteroides sp. 2_1_33B
RepID=UPI0001BBAFC1
Length = 708
Score = 70.1 bits (170), Expect = 7e-11
Identities = 40/90 (44%), Positives = 51/90 (56%)
Frame = +2
Query: 173 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
R +++VFA P + +ED+KEG G VT + FG FV+ G NGLVHIS+L
Sbjct: 616 RQTIQVFAFDPMVKT------IEDLKEGQVLPGIVTNITNFGCFVDVGIKENGLVHISEL 669
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
A F + VV Q V VKVLSVD +K
Sbjct: 670 ADRFVSDPTQVVSIHQHVKVKVLSVDLSRK 699
[215][TOP]
>UniRef100_Q67K87 Ribosomal protein S1-like RNA-binding domain n=1
Tax=Symbiobacterium thermophilum RepID=Q67K87_SYMTH
Length = 764
Score = 70.1 bits (170), Expect = 7e-11
Identities = 35/82 (42%), Positives = 52/82 (63%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E P +KLED++ G E GTV V +FGAFV+ G + +GLVH+S+L+ + K+
Sbjct: 632 ELPQPIFRTDVLKLEDLQVGMELMGTVRNVVDFGAFVDIGVHEDGLVHVSQLSHKYVKHP 691
Query: 377 KDVVQPGQKVTVKVLSVDAEKK 442
+VVQ G V VKV+ VD +++
Sbjct: 692 SEVVQVGDVVRVKVIEVDLKRQ 713
[216][TOP]
>UniRef100_Q5QUM6 Transcriptional accessory protein n=1 Tax=Idiomarina loihiensis
RepID=Q5QUM6_IDILO
Length = 776
Score = 70.1 bits (170), Expect = 7e-11
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
K+ D+K G EG VT V FGAF++ G + +GLVHIS LA F + ++VV+ G V V
Sbjct: 644 KVSDLKPGMLLEGVVTNVANFGAFIDVGVHQDGLVHISALADKFVSDPREVVKAGDIVKV 703
Query: 413 KVLSVDAEKK 442
KVL VD E+K
Sbjct: 704 KVLEVDIERK 713
[217][TOP]
>UniRef100_Q5NY37 Putative uncharacterized protein n=1 Tax=Aromatoleum aromaticum
EbN1 RepID=Q5NY37_AZOSE
Length = 782
Score = 70.1 bits (170), Expect = 7e-11
Identities = 37/69 (53%), Positives = 45/69 (65%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
L+D+ G EGTVT V FGAFV+ G + +GLVHIS LA F K+ VV+ GQ V VK
Sbjct: 644 LKDLAPGMMLEGTVTNVTNFGAFVDVGVHQDGLVHISALADRFVKDPHSVVKAGQVVKVK 703
Query: 416 VLSVDAEKK 442
VL VD +K
Sbjct: 704 VLEVDLARK 712
[218][TOP]
>UniRef100_Q47CF7 RNA binding S1 n=1 Tax=Dechloromonas aromatica RCB
RepID=Q47CF7_DECAR
Length = 772
Score = 70.1 bits (170), Expect = 7e-11
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
K+ D++ G EG VT V FGAFV+ G + +GLVH+S L++ F K+ DVV+ GQ V V
Sbjct: 648 KVSDLRPGMILEGVVTNVAAFGAFVDIGVHQDGLVHVSALSNTFVKDPHDVVKAGQVVKV 707
Query: 413 KVLSVDAEKK 442
KVL VD +++
Sbjct: 708 KVLEVDLQRQ 717
[219][TOP]
>UniRef100_Q12AI9 RNA binding S1 n=1 Tax=Polaromonas sp. JS666 RepID=Q12AI9_POLSJ
Length = 803
Score = 70.1 bits (170), Expect = 7e-11
Identities = 33/69 (47%), Positives = 48/69 (69%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
+ D+KEG EGTV+ V FGAFV+ G + +GLVH+S+LA+ F +A++VV+ G V V+
Sbjct: 670 IRDLKEGMTLEGTVSNVAAFGAFVDIGVHQDGLVHVSQLANKFVNDAREVVKTGDIVKVR 729
Query: 416 VLSVDAEKK 442
V VD +K
Sbjct: 730 VTEVDVARK 738
[220][TOP]
>UniRef100_Q0VSY6 S1 RNA binding domain protein n=1 Tax=Alcanivorax borkumensis SK2
RepID=Q0VSY6_ALCBS
Length = 790
Score = 70.1 bits (170), Expect = 7e-11
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
L+D+K+ EGTVT V FGAFV+ G + +GLVH+S LA F ++ VV PG V VK
Sbjct: 644 LKDLKQNMILEGTVTNVTNFGAFVDVGVHQDGLVHVSALADKFVEDPHQVVAPGDIVKVK 703
Query: 416 VLSVDAEKK 442
VL VD ++K
Sbjct: 704 VLDVDLDRK 712
[221][TOP]
>UniRef100_C6C261 RNA binding S1 domain protein n=1 Tax=Desulfovibrio salexigens DSM
2638 RepID=C6C261_DESAD
Length = 716
Score = 70.1 bits (170), Expect = 7e-11
Identities = 33/70 (47%), Positives = 47/70 (67%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
++ D++EG G VT V FGAFV+ G + +GLVHIS++A F ++ VV PGQ + V
Sbjct: 636 EVSDLREGMILNGIVTNVTAFGAFVDIGVHQDGLVHISRMADDFVRDPATVVHPGQALKV 695
Query: 413 KVLSVDAEKK 442
KVL VD ++K
Sbjct: 696 KVLDVDIQRK 705
[222][TOP]
>UniRef100_C3PH70 Putative transcriptional accessory protein n=1 Tax=Corynebacterium
aurimucosum ATCC 700975 RepID=C3PH70_CORA7
Length = 759
Score = 70.1 bits (170), Expect = 7e-11
Identities = 33/70 (47%), Positives = 47/70 (67%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
K+ D+K G EGTVT V FGAF++ G + +GLVH+S ++ F + DVV+ GQ V V
Sbjct: 634 KVSDLKPGMILEGTVTNVAAFGAFIDIGVHQDGLVHVSAMSHKFVSDPHDVVRSGQVVKV 693
Query: 413 KVLSVDAEKK 442
KV+ VD E++
Sbjct: 694 KVMEVDVERQ 703
[223][TOP]
>UniRef100_B9JSI3 Putative uncharacterized protein n=1 Tax=Agrobacterium vitis S4
RepID=B9JSI3_AGRVS
Length = 770
Score = 70.1 bits (170), Expect = 7e-11
Identities = 38/90 (42%), Positives = 54/90 (60%)
Frame = +2
Query: 173 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
RPS + A E+ + D+K G EGTVT V FGAFV+ G + +GLVH+S+L
Sbjct: 631 RPSFKTAIFADGVEE------ITDLKPGMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSQL 684
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
A F K+ +VV+ G V V+V+ VD ++K
Sbjct: 685 ADKFVKDPHEVVKAGDVVKVRVVEVDVKRK 714
[224][TOP]
>UniRef100_B7GFP8 Transcriptional accessory protein Tex, contains RNAse H and S1
domains n=1 Tax=Anoxybacillus flavithermus WK1
RepID=B7GFP8_ANOFW
Length = 733
Score = 70.1 bits (170), Expect = 7e-11
Identities = 35/71 (49%), Positives = 49/71 (69%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+K+ED+++G E EGTV V +FG FV+ G +GLVHISKL++ + K+ DVV G V
Sbjct: 647 LKMEDLRKGMELEGTVRNVVDFGVFVDIGVKQDGLVHISKLSTRYVKHPLDVVSVGDIVK 706
Query: 410 VKVLSVDAEKK 442
V V SVD +K+
Sbjct: 707 VWVDSVDLQKE 717
[225][TOP]
>UniRef100_Q0FTR2 S1 RNA binding domain protein n=1 Tax=Roseovarius sp. HTCC2601
RepID=Q0FTR2_9RHOB
Length = 771
Score = 70.1 bits (170), Expect = 7e-11
Identities = 38/90 (42%), Positives = 52/90 (57%)
Frame = +2
Query: 173 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
RPS + + EQ + D+K G EGTVT V FGAFV+ G + +GLVH+S+L
Sbjct: 627 RPSFKTASFTEGVEQ------ITDLKPGMSLEGTVTNVAAFGAFVDIGVHQDGLVHVSQL 680
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
A F K+ +VV+ G V V+V VD +K
Sbjct: 681 ADRFVKDPHEVVKAGDVVRVRVTEVDVPRK 710
[226][TOP]
>UniRef100_C9BB85 RNA binding protein S1 n=1 Tax=Enterococcus faecium 1,141,733
RepID=C9BB85_ENTFC
Length = 726
Score = 70.1 bits (170), Expect = 7e-11
Identities = 37/81 (45%), Positives = 47/81 (58%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E PA + +ED+K G E GTV V +FGAFV+ G +GLVHISKL+ F K+
Sbjct: 633 EMPAPLLRTDVLSMEDLKPGMELTGTVRNVIDFGAFVDIGVKQDGLVHISKLSKKFVKHP 692
Query: 377 KDVVQPGQKVTVKVLSVDAEK 439
DVV G VT + VD +K
Sbjct: 693 TDVVSVGDIVTAWIEQVDTKK 713
[227][TOP]
>UniRef100_C9AMT8 RNA binding protein S1 n=1 Tax=Enterococcus faecium Com15
RepID=C9AMT8_ENTFC
Length = 726
Score = 70.1 bits (170), Expect = 7e-11
Identities = 37/81 (45%), Positives = 47/81 (58%)
Frame = +2
Query: 197 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 376
E PA + +ED+K G E GTV +FGAFV+ G +GLVHISKL+ F K+
Sbjct: 633 EMPAPLLRTDVLSMEDLKPGMELTGTVRNAIDFGAFVDIGVKQDGLVHISKLSKKFVKHP 692
Query: 377 KDVVQPGQKVTVKVLSVDAEK 439
DVV G VTV + VD +K
Sbjct: 693 TDVVSVGDIVTVWIEQVDTKK 713
[228][TOP]
>UniRef100_C8STW5 RNA binding S1 domain protein n=1 Tax=Mesorhizobium opportunistum
WSM2075 RepID=C8STW5_9RHIZ
Length = 773
Score = 70.1 bits (170), Expect = 7e-11
Identities = 33/69 (47%), Positives = 49/69 (71%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
++D+K G EGTVT V FGAF++ G + +GLVH+S+LA F K+A +VV+ G V V+
Sbjct: 647 IKDLKPGMLLEGTVTNVAAFGAFIDIGVHQDGLVHVSQLADRFIKDAHEVVKAGDVVKVR 706
Query: 416 VLSVDAEKK 442
V+ VD ++K
Sbjct: 707 VVDVDIKRK 715
[229][TOP]
>UniRef100_C7W342 RNA binding protein S1 n=1 Tax=Enterococcus faecalis E1Sol
RepID=C7W342_ENTFA
Length = 730
Score = 70.1 bits (170), Expect = 7e-11
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+ +ED+K G E +GTV V +FGAFV+ G +GLVHISKL++ F K+ DVV G VT
Sbjct: 646 LTMEDLKPGMEMQGTVRNVIDFGAFVDIGVKQDGLVHISKLSTKFVKHPTDVVAVGDVVT 705
Query: 410 VKVLSVDAEK 439
V V VD +K
Sbjct: 706 VWVEDVDLKK 715
[230][TOP]
>UniRef100_C7VC72 S1 RNA binding protein n=1 Tax=Enterococcus faecalis CH188
RepID=C7VC72_ENTFA
Length = 730
Score = 70.1 bits (170), Expect = 7e-11
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+ +ED+K G E +GTV V +FGAFV+ G +GLVHISKL++ F K+ DVV G VT
Sbjct: 646 LTMEDLKPGMEMQGTVRNVIDFGAFVDIGVKQDGLVHISKLSTKFVKHPTDVVAVGDVVT 705
Query: 410 VKVLSVDAEK 439
V V VD +K
Sbjct: 706 VWVEDVDLKK 715
[231][TOP]
>UniRef100_C7UG75 RNA binding S1 n=1 Tax=Enterococcus faecalis ATCC 4200
RepID=C7UG75_ENTFA
Length = 730
Score = 70.1 bits (170), Expect = 7e-11
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+ +ED+K G E +GTV V +FGAFV+ G +GLVHISKL++ F K+ DVV G VT
Sbjct: 646 LTMEDLKPGMEMQGTVRNVIDFGAFVDIGVKQDGLVHISKLSTKFVKHPTDVVAVGDVVT 705
Query: 410 VKVLSVDAEK 439
V V VD +K
Sbjct: 706 VWVEDVDLKK 715
[232][TOP]
>UniRef100_C7U6Q5 S1 RNA-binding domain-containing protein n=1 Tax=Enterococcus
faecalis T3 RepID=C7U6Q5_ENTFA
Length = 730
Score = 70.1 bits (170), Expect = 7e-11
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+ +ED+K G E +GTV V +FGAFV+ G +GLVHISKL++ F K+ DVV G VT
Sbjct: 646 LTMEDLKPGMEMQGTVRNVIDFGAFVDIGVKQDGLVHISKLSTKFVKHPTDVVAVGDVVT 705
Query: 410 VKVLSVDAEK 439
V V VD +K
Sbjct: 706 VWVEDVDLKK 715
[233][TOP]
>UniRef100_C4VGZ0 Protein YhgF n=5 Tax=Enterococcus faecalis RepID=C4VGZ0_ENTFA
Length = 730
Score = 70.1 bits (170), Expect = 7e-11
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+ +ED+K G E +GTV V +FGAFV+ G +GLVHISKL++ F K+ DVV G VT
Sbjct: 646 LTMEDLKPGMEMQGTVRNVIDFGAFVDIGVKQDGLVHISKLSTKFVKHPTDVVAVGDVVT 705
Query: 410 VKVLSVDAEK 439
V V VD +K
Sbjct: 706 VWVEDVDLKK 715
[234][TOP]
>UniRef100_C2DDA7 S1 domain RNA-binding protein n=5 Tax=Enterococcus faecalis
RepID=C2DDA7_ENTFA
Length = 730
Score = 70.1 bits (170), Expect = 7e-11
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+ +ED+K G E +GTV V +FGAFV+ G +GLVHISKL++ F K+ DVV G VT
Sbjct: 646 LTMEDLKPGMEMQGTVRNVIDFGAFVDIGVKQDGLVHISKLSTKFVKHPTDVVAVGDVVT 705
Query: 410 VKVLSVDAEK 439
V V VD +K
Sbjct: 706 VWVEDVDLKK 715
[235][TOP]
>UniRef100_C2AH79 Transcriptional accessory protein n=1 Tax=Thermomonospora curvata
DSM 43183 RepID=C2AH79_THECU
Length = 810
Score = 70.1 bits (170), Expect = 7e-11
Identities = 38/90 (42%), Positives = 53/90 (58%)
Frame = +2
Query: 173 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
RP+ + A A E LED+K G EG VT V FGAFV+ G + +GLVHIS +
Sbjct: 657 RPAFKTAAFADGVET------LEDLKPGMVLEGVVTNVAAFGAFVDVGVHQDGLVHISAM 710
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
+ + + ++VV+PG V V+VL VD +K
Sbjct: 711 SKNYVSDPREVVKPGDIVKVRVLDVDIPRK 740
[236][TOP]
>UniRef100_C0X4X2 S1 domain RNA-binding protein n=3 Tax=Enterococcus faecalis
RepID=C0X4X2_ENTFA
Length = 730
Score = 70.1 bits (170), Expect = 7e-11
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+ +ED+K G E +GTV V +FGAFV+ G +GLVHISKL++ F K+ DVV G VT
Sbjct: 646 LTMEDLKPGMEMQGTVRNVIDFGAFVDIGVKQDGLVHISKLSTKFVKHPTDVVAVGDVVT 705
Query: 410 VKVLSVDAEK 439
V V VD +K
Sbjct: 706 VWVEDVDLKK 715
[237][TOP]
>UniRef100_B5JWZ5 RNA binding S1 domain protein n=1 Tax=gamma proteobacterium
HTCC5015 RepID=B5JWZ5_9GAMM
Length = 774
Score = 70.1 bits (170), Expect = 7e-11
Identities = 34/70 (48%), Positives = 48/70 (68%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
KL D+K+ EG VT V FGAFV+ G + +GLVHIS ++ F K+ +DVV+ G+ V V
Sbjct: 640 KLSDLKDDMILEGVVTNVTHFGAFVDVGVHQDGLVHISAMSHEFVKDPRDVVKAGEVVKV 699
Query: 413 KVLSVDAEKK 442
KV++VD +K
Sbjct: 700 KVMAVDVARK 709
[238][TOP]
>UniRef100_A3WJ57 Transcriptional accessory protein n=1 Tax=Idiomarina baltica OS145
RepID=A3WJ57_9GAMM
Length = 768
Score = 70.1 bits (170), Expect = 7e-11
Identities = 33/70 (47%), Positives = 47/70 (67%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
K+ D++ G EG VT V FGAFV+ G + +GLVHIS LA F + +D+V+ G VTV
Sbjct: 643 KVSDLEPGMTLEGVVTNVANFGAFVDIGVHQDGLVHISALADTFVSDPRDIVKAGDIVTV 702
Query: 413 KVLSVDAEKK 442
+V+ VD ++K
Sbjct: 703 RVVEVDIDRK 712
[239][TOP]
>UniRef100_UPI0001BB9DBF transcriptional accessory protein n=1 Tax=Acinetobacter lwoffii
SH145 RepID=UPI0001BB9DBF
Length = 789
Score = 69.7 bits (169), Expect = 9e-11
Identities = 34/69 (49%), Positives = 48/69 (69%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
++ + EG + EG VT V FGAFV+ G + +GLVHIS+L + F + VV+PGQ V V
Sbjct: 640 EVAQLSEGMQLEGVVTNVTNFGAFVDVGVHQDGLVHISELTNEFVADPHKVVKPGQIVQV 699
Query: 413 KVLSVDAEK 439
+VL+VDAE+
Sbjct: 700 RVLNVDAER 708
[240][TOP]
>UniRef100_UPI0001B4F31E transcription accessory protein n=1 Tax=Streptomyces hygroscopicus
ATCC 53653 RepID=UPI0001B4F31E
Length = 800
Score = 69.7 bits (169), Expect = 9e-11
Identities = 34/70 (48%), Positives = 46/70 (65%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
K+ D+ G EG VT V FGAFV+ G + +GLVH+S ++ F K+ +DVV+PG V V
Sbjct: 646 KIGDLASGMILEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSKTFVKDPRDVVKPGDIVRV 705
Query: 413 KVLSVDAEKK 442
KVL VD +K
Sbjct: 706 KVLDVDIPRK 715
[241][TOP]
>UniRef100_Q8YLP7 Alr5249 protein n=1 Tax=Nostoc sp. PCC 7120 RepID=Q8YLP7_ANASP
Length = 719
Score = 69.7 bits (169), Expect = 9e-11
Identities = 35/68 (51%), Positives = 48/68 (70%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
++ D++EG E EG VT V FGAFV+ G + +GLVHIS+LA F + K VV+ GQ V V
Sbjct: 639 EITDLQEGMELEGIVTNVANFGAFVDIGVHQDGLVHISQLADRFVDDPKKVVKVGQVVKV 698
Query: 413 KVLSVDAE 436
+VL V+A+
Sbjct: 699 RVLEVNAK 706
[242][TOP]
>UniRef100_Q7UUG1 Putative uncharacterized protein n=1 Tax=Rhodopirellula baltica
RepID=Q7UUG1_RHOBA
Length = 750
Score = 69.7 bits (169), Expect = 9e-11
Identities = 30/69 (43%), Positives = 47/69 (68%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
+ED++EG EG +T V FGAF++ G + +GL+H+S+LA+ F + +VV G V VK
Sbjct: 672 MEDLREGMVLEGVITNVTHFGAFIDLGVHQDGLIHVSQLANQFVSDPSEVVSVGDVVKVK 731
Query: 416 VLSVDAEKK 442
VL +D ++K
Sbjct: 732 VLEIDLDRK 740
[243][TOP]
>UniRef100_Q0A8L6 RNA binding S1 domain protein n=1 Tax=Alkalilimnicola ehrlichii
MLHE-1 RepID=Q0A8L6_ALHEH
Length = 782
Score = 69.7 bits (169), Expect = 9e-11
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +2
Query: 236 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 415
L+D+ G EGTVT V FGAFV+ G + +GLVHIS LA F ++ +VV+ G V VK
Sbjct: 647 LQDLAPGMVLEGTVTNVTNFGAFVDIGVHQDGLVHISALAERFVRDPHEVVKAGDIVKVK 706
Query: 416 VLSVDAEKK 442
V+ VD E+K
Sbjct: 707 VMEVDLERK 715
[244][TOP]
>UniRef100_C6D0I6 RNA binding S1 domain protein n=1 Tax=Paenibacillus sp. JDR-2
RepID=C6D0I6_PAESJ
Length = 747
Score = 69.7 bits (169), Expect = 9e-11
Identities = 37/90 (41%), Positives = 51/90 (56%)
Frame = +2
Query: 170 VRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISK 349
+RP E P + +ED+ G E +GTV V +FGAF++ G +GLVHIS+
Sbjct: 647 LRPGRDPREELPPPIFHTDVLNIEDLTPGMELQGTVRNVIDFGAFIDIGIKNDGLVHISQ 706
Query: 350 LASGFTKNAKDVVQPGQKVTVKVLSVDAEK 439
++ F K+ DVV G VTV VL VD +K
Sbjct: 707 MSDKFVKHPMDVVSVGDNVTVWVLGVDLKK 736
[245][TOP]
>UniRef100_D0BMP4 S1 RNA-binding protein n=1 Tax=Granulicatella elegans ATCC 700633
RepID=D0BMP4_9LACT
Length = 731
Score = 69.7 bits (169), Expect = 9e-11
Identities = 32/70 (45%), Positives = 46/70 (65%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+ +ED++ G E +GT+ V +FGAFV+ G +GLVHIS++ GF K+ DVV G VT
Sbjct: 647 LSMEDIQVGMELQGTIRNVVDFGAFVDIGVKQDGLVHISRMKKGFVKHPSDVVAVGDIVT 706
Query: 410 VKVLSVDAEK 439
V V +D +K
Sbjct: 707 VWVTEIDMKK 716
[246][TOP]
>UniRef100_C8N9I1 Histidine triad domain-containing protein n=1 Tax=Cardiobacterium
hominis ATCC 15826 RepID=C8N9I1_9GAMM
Length = 769
Score = 69.7 bits (169), Expect = 9e-11
Identities = 42/107 (39%), Positives = 58/107 (54%)
Frame = +2
Query: 122 RPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGA 301
+P R P G Q A FAE ++ D++ G EG V+ V FGA
Sbjct: 632 KPGRDPRGEFQTA---------TFAEG--------VHEISDLQPGMILEGVVSNVANFGA 674
Query: 302 FVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
FV+ G + +GLVHIS LA + ++ +D+V+ G V VKVL VDAE+K
Sbjct: 675 FVDIGVHQDGLVHISALADRYVQDPRDIVKAGDVVKVKVLEVDAERK 721
[247][TOP]
>UniRef100_C8ATX0 S1 RNA-binding domain-containing protein n=1 Tax=Staphylococcus
aureus subsp. aureus M876 RepID=C8ATX0_STAAU
Length = 716
Score = 69.7 bits (169), Expect = 9e-11
Identities = 33/70 (47%), Positives = 45/70 (64%)
Frame = +2
Query: 230 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 409
+ +ED+KEG + GTV V +FGAFV+ G +GLVH+SKL+ F KN D+V G V
Sbjct: 635 LSIEDLKEGMKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPMDIVSVGDIVD 694
Query: 410 VKVLSVDAEK 439
V + S+D K
Sbjct: 695 VWIHSIDKNK 704
[248][TOP]
>UniRef100_C7PIE5 RNA binding S1 domain protein n=1 Tax=Chitinophaga pinensis DSM
2588 RepID=C7PIE5_CHIPD
Length = 760
Score = 69.7 bits (169), Expect = 9e-11
Identities = 39/90 (43%), Positives = 50/90 (55%)
Frame = +2
Query: 173 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 352
+PS E E A K+ED+K G G VT + FGAFV+ G +GLVHIS L
Sbjct: 610 KPSRDPRDEIAIFEYAEGIHKMEDLKVGMTLPGVVTNITNFGAFVDIGVKQDGLVHISHL 669
Query: 353 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 442
++ F N + V+ QKVTV VL VD +K
Sbjct: 670 SNRFISNPNEAVKLNQKVTVTVLEVDPSRK 699
[249][TOP]
>UniRef100_C6WCU3 RNA binding S1 domain protein n=1 Tax=Actinosynnema mirum DSM 43827
RepID=C6WCU3_ACTMD
Length = 785
Score = 69.7 bits (169), Expect = 9e-11
Identities = 35/70 (50%), Positives = 46/70 (65%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
K+ D+K G EG VT V FGAFV+ G + +GLVHIS L+ + K+ +DVV+ G V V
Sbjct: 639 KIADLKPGMVLEGVVTNVAAFGAFVDVGVHQDGLVHISALSDTYVKDPRDVVKSGDVVRV 698
Query: 413 KVLSVDAEKK 442
KVL VD +K
Sbjct: 699 KVLEVDIPRK 708
[250][TOP]
>UniRef100_C6NZN2 RNA binding S1 domain protein n=1 Tax=Sideroxydans lithotrophicus
ES-1 RepID=C6NZN2_9GAMM
Length = 801
Score = 69.7 bits (169), Expect = 9e-11
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +2
Query: 233 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 412
+L+D++ G EG VT V FGAFV+ G + +GLVHIS LA F K+ VV+ GQ V V
Sbjct: 672 ELKDLEPGMILEGVVTNVAAFGAFVDIGVHQDGLVHISALADKFVKDPHSVVKAGQIVKV 731
Query: 413 KVLSVDAEKK 442
KVL VD ++K
Sbjct: 732 KVLEVDVKRK 741