BP097350 ( MXL074c08_r )

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[1][TOP]
>UniRef100_A8I003 Ycf32-related subunit of photosystem II n=1 Tax=Chlamydomonas
           reinhardtii RepID=A8I003_CHLRE
          Length = 260

 Score =  263 bits (673), Expect = 3e-69
 Identities = 142/142 (100%), Positives = 142/142 (100%)
 Frame = +1

Query: 1   ALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASW 180
           ALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASW
Sbjct: 3   ALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASW 62

Query: 181 MMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVP 360
           MMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVP
Sbjct: 63  MMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVP 122

Query: 361 AAVGMGAAASLLFAQSAEASTE 426
           AAVGMGAAASLLFAQSAEASTE
Sbjct: 123 AAVGMGAAASLLFAQSAEASTE 144

 Score =  143 bits (360), Expect = 7e-33
 Identities = 74/86 (86%), Positives = 81/86 (94%)
 Frame = +1

Query: 169 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 348
           AAS + A +A+A+TE+A+LAASDNR  ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 130 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVMGWVGFNIFGSLQAQLNQMDAKNK 189

Query: 349 RAVPAAVGMGAAASLLFAQSAEASTE 426
           RAVPAAVGMGAAASLLFAQSAEASTE
Sbjct: 190 RAVPAAVGMGAAASLLFAQSAEASTE 215

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 47/60 (78%), Positives = 55/60 (91%)
 Frame = +1

Query: 169 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 348
           AAS + A +A+A+TE+A+LAASDNR  ILATLLVPV+GWVGFNIFGSLQAQL+QMDAKNK
Sbjct: 201 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLSQMDAKNK 260

[2][TOP]
>UniRef100_A8JKA1 Ycf32-related polyprotein of photosystem II (Fragment) n=1
           Tax=Chlamydomonas reinhardtii RepID=A8JKA1_CHLRE
          Length = 354

 Score =  182 bits (461), Expect = 1e-44
 Identities = 96/96 (100%), Positives = 96/96 (100%)
 Frame = +1

Query: 139 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 318
           VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA
Sbjct: 1   VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 60

Query: 319 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTE 426
           QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTE
Sbjct: 61  QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTE 96

 Score =  143 bits (360), Expect = 7e-33
 Identities = 74/86 (86%), Positives = 81/86 (94%)
 Frame = +1

Query: 169 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 348
           AAS + A +A+A+TE+A+LAASDNR  ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 82  AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 141

Query: 349 RAVPAAVGMGAAASLLFAQSAEASTE 426
           RAVPAAVGMGAAASLLFAQSAEASTE
Sbjct: 142 RAVPAAVGMGAAASLLFAQSAEASTE 167

 Score =  143 bits (360), Expect = 7e-33
 Identities = 74/86 (86%), Positives = 81/86 (94%)
 Frame = +1

Query: 169 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 348
           AAS + A +A+A+TE+A+LAASDNR  ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 153 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 212

Query: 349 RAVPAAVGMGAAASLLFAQSAEASTE 426
           RAVPAAVGMGAAASLLFAQSAEASTE
Sbjct: 213 RAVPAAVGMGAAASLLFAQSAEASTE 238

 Score =  143 bits (360), Expect = 7e-33
 Identities = 74/86 (86%), Positives = 81/86 (94%)
 Frame = +1

Query: 169 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 348
           AAS + A +A+A+TE+A+LAASDNR  ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 224 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 283

Query: 349 RAVPAAVGMGAAASLLFAQSAEASTE 426
           RAVPAAVGMGAAASLLFAQSAEASTE
Sbjct: 284 RAVPAAVGMGAAASLLFAQSAEASTE 309

 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 47/60 (78%), Positives = 54/60 (90%)
 Frame = +1

Query: 169 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 348
           AAS + A +A+A+TE+A+LAASDNR  ILATLLVPV+GWVGFNIFGSLQAQL QMDAKNK
Sbjct: 295 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLRQMDAKNK 354

[3][TOP]
>UniRef100_C1MZ88 Photosystem II PsbY protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1MZ88_9CHLO
          Length = 279

 Score = 66.6 bits (161), Expect = 8e-10
 Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
 Frame = +1

Query: 10  MSAPTSAALRSSVRSAKPV----LPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAAS 177
           +SA  S   + S R  + V    LPVR A   V   A A  +    ++G  A L+   A 
Sbjct: 13  VSARVSVRAKVSTRGLRAVGVKPLPVRPAAVRVSASAAAESQTDDLQLGQTAALTLAGAL 72

Query: 178 WMMAGNAQAATE-LASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN--- 345
            +    A AA+E L+ +A  D+RA I   +L P +GWV +NI      Q N M  KN   
Sbjct: 73  ALGTEQASAASESLSQVAGFDSRALIFLGILGPAIGWVLYNILTPGLNQFNSMQEKNARG 132

Query: 346 KRAVPAAVGMGAAASLLFAQSAEASTE 426
           K+ +P  +G+ AAA     + A+A+TE
Sbjct: 133 KKGIPLGLGLSAAALAGMPEQADAATE 159

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 41/91 (45%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
 Frame = +1

Query: 163 SVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAK 342
           S AA   M   A AATEL   A  D R  I     VPVLGWV +NI      Q+  M  K
Sbjct: 143 SAAALAGMPEQADAATELMQTAGLDARILIFGAF-VPVLGWVAYNILKPGLNQIEDMQKK 201

Query: 343 N--KRAVPAAV-GMGAAASLLFAQSAEASTE 426
           N  KR V A V G+ AAA L   + A+A+TE
Sbjct: 202 NAKKRGVAAGVTGLSAAALLGMPEQADAATE 232

[4][TOP]
>UniRef100_C1E7Y4 Photosystem II PsbY protein n=1 Tax=Micromonas sp. RCC299
           RepID=C1E7Y4_9CHLO
          Length = 191

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 42/90 (46%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
 Frame = +1

Query: 163 SVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQM--D 336
           S AA   M   A AATE   LA  D R  I     VPVLGWVG+NI G    QL +M  D
Sbjct: 56  SAAALMGMPEAADAATEAMQLADLDARIAIFGAF-VPVLGWVGYNILGPGLKQLEKMQQD 114

Query: 337 AKNKRAVPAAVGMGAAASLLFAQSAEASTE 426
           A  K+ V A VG+ AAA +   ++A+A+TE
Sbjct: 115 AAKKKGVAAGVGLSAAALMGMPEAADAATE 144

[5][TOP]
>UniRef100_A9U315 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
           patens RepID=A9U315_PHYPA
          Length = 137

 Score = 63.5 bits (153), Expect = 7e-09
 Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
 Frame = +1

Query: 139 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 318
           V  V T  ++ A+   + +A A+ ++ +LA  DNR   L   L+P +GWV FNI   LQ 
Sbjct: 2   VNLVCTTGAMFAAMATSESAMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNI---LQP 58

Query: 319 QLNQMD-AKNKRAVPAAVGMGAAASLLFAQSAEASTE 426
            LNQ+D  +  +A+ A  G+GAAA+L+ A  A+A+ E
Sbjct: 59  ALNQVDKMRGAKALVAGAGLGAAATLMAAPHADAAQE 95

[6][TOP]
>UniRef100_A9SPH7 PsbY photosystem II polypeptide n=1 Tax=Physcomitrella patens
           subsp. patens RepID=A9SPH7_PHYPA
          Length = 368

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
 Frame = +1

Query: 136 KVGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQ 315
           K G +  L    AS  +A +A AA E+A+LA SD+R  I+  LL+P +GWV FNI     
Sbjct: 205 KRGVIGALGLGTASLFLAPHADAAQEIATLADSDSRGLIIIGLLLPAVGWVLFNILKPAL 264

Query: 316 AQLNQMDAKNKRAVP-----------AAVGMGAAA-SLLFAQSAEASTE 426
            Q+N +   N    P            A G+ AAA SLL A  A+A  +
Sbjct: 265 NQINNIVEGNDTGAPVKRGKKFGGMIGATGISAAAMSLLAAPKADAQVQ 313

[7][TOP]
>UniRef100_Q00Y99 Manganese-binding protein PsbY, photosystem II-associated-s (ISS)
           n=1 Tax=Ostreococcus tauri RepID=Q00Y99_OSTTA
          Length = 265

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 46/139 (33%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
 Frame = +1

Query: 10  MSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWMMA 189
           + A  +A L    R AK     R A+ S V    A+ E             S+AA+ + A
Sbjct: 10  LRASRAAPLAKRERRAK-----RTAIASKVATKVATIESDEIVTRGQTAAMSLAATMLFA 64

Query: 190 GNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN--KRAVPA 363
             A AA E+  LA  D R  I   +  PVLGWV +NI G    Q   M  KN   + V A
Sbjct: 65  DQAHAAQEVGDLAGIDGRIAIFF-VFAPVLGWVAYNILGPGLRQFEDMQKKNAKSKGVLA 123

Query: 364 AVGMGAAASLLFAQSAEAS 420
             G+ AAA L   ++++A+
Sbjct: 124 GAGLSAAALLGMPEASDAA 142

[8][TOP]
>UniRef100_B6SUJ7 Photosystem II core complex proteins psbY n=1 Tax=Zea mays
           RepID=B6SUJ7_MAIZE
          Length = 196

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 47/136 (34%), Positives = 69/136 (50%)
 Frame = +1

Query: 13  SAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWMMAG 192
           SAP S +   S+R     +P R   +   V A  S    G     +A+  +  A+  +A 
Sbjct: 19  SAPPSTSGSVSLR-----VPAR--AKKAAVSASVSSALAGAFFSALASSDAALAAQRVAD 71

Query: 193 NAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVPAAVG 372
            A AA      A SDNR  +L  ++ P +GWV +NI   LQ  LNQ++    +AV A +G
Sbjct: 72  VAAAAD-----AGSDNRGQLLLFVVAPAIGWVLYNI---LQPALNQLNRMRSQAVVAGLG 123

Query: 373 MGAAASLLFAQSAEAS 420
           +GAAA+ + A + EAS
Sbjct: 124 LGAAAAGM-AAAPEAS 138

[9][TOP]
>UniRef100_A4S5C8 Possible psbY, PSII-Y, photosystem II polypeptide n=1
           Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S5C8_OSTLU
          Length = 416

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
 Frame = +1

Query: 4   LRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWM 183
           + + A   A  R + R+A+    + RA  S VV  + + +    + G  A +++ AAS  
Sbjct: 9   ITLPARAPARARRTARTAQSARVIARARTSAVVEDEFATDDDVVRRGQTAAMAT-AASMF 67

Query: 184 MAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN-----K 348
            A  A AA EL   A  D R  I   +  PVLGWV +NI      QL  M A N     K
Sbjct: 68  FADRADAAQELMQTAL-DGRPLIFLAVFGPVLGWVAYNILSPGLRQLENMQAVNAKSSKK 126

Query: 349 RAVPAAVGMGAAASLL 396
           RA  A  G   A++L+
Sbjct: 127 RAAGALAGGLTASALM 142

[10][TOP]
>UniRef100_B6SQV2 Photosystem II core complex proteins psbY n=1 Tax=Zea mays
           RepID=B6SQV2_MAIZE
          Length = 191

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
 Frame = +1

Query: 22  TSAALRSSVRSAKPVLPVRRAVR-SVVVRAQASEEQLGFKVGTVATLSSV-AASWMMAGN 195
           T A L+ + ++A    P   +   S+ VR   + ++    V   +TL+    A+   + +
Sbjct: 6   TMALLKPAAKAAARSAPSTSSGSVSLRVRTGQAAKKAALSVSASSTLAGAFLAALASSPD 65

Query: 196 AQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVPAAVGM 375
           A  A   A+ A  D+R  +L  ++ P +GWV +NI      QLN+M  ++ +AV A +G+
Sbjct: 66  AALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRM--RSSQAVAAGLGL 123

Query: 376 GAAASLLFAQSAEAS 420
           GAAA+   A   EAS
Sbjct: 124 GAAAAAGMAAPPEAS 138