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[1][TOP] >UniRef100_A8I003 Ycf32-related subunit of photosystem II n=1 Tax=Chlamydomonas reinhardtii RepID=A8I003_CHLRE Length = 260 Score = 263 bits (673), Expect = 3e-69 Identities = 142/142 (100%), Positives = 142/142 (100%) Frame = +1 Query: 1 ALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASW 180 ALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASW Sbjct: 3 ALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASW 62 Query: 181 MMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVP 360 MMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVP Sbjct: 63 MMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVP 122 Query: 361 AAVGMGAAASLLFAQSAEASTE 426 AAVGMGAAASLLFAQSAEASTE Sbjct: 123 AAVGMGAAASLLFAQSAEASTE 144 Score = 143 bits (360), Expect = 7e-33 Identities = 74/86 (86%), Positives = 81/86 (94%) Frame = +1 Query: 169 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 348 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 130 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVMGWVGFNIFGSLQAQLNQMDAKNK 189 Query: 349 RAVPAAVGMGAAASLLFAQSAEASTE 426 RAVPAAVGMGAAASLLFAQSAEASTE Sbjct: 190 RAVPAAVGMGAAASLLFAQSAEASTE 215 Score = 95.5 bits (236), Expect = 2e-18 Identities = 47/60 (78%), Positives = 55/60 (91%) Frame = +1 Query: 169 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 348 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL+QMDAKNK Sbjct: 201 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLSQMDAKNK 260 [2][TOP] >UniRef100_A8JKA1 Ycf32-related polyprotein of photosystem II (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8JKA1_CHLRE Length = 354 Score = 182 bits (461), Expect = 1e-44 Identities = 96/96 (100%), Positives = 96/96 (100%) Frame = +1 Query: 139 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 318 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA Sbjct: 1 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 60 Query: 319 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTE 426 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTE Sbjct: 61 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTE 96 Score = 143 bits (360), Expect = 7e-33 Identities = 74/86 (86%), Positives = 81/86 (94%) Frame = +1 Query: 169 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 348 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 82 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 141 Query: 349 RAVPAAVGMGAAASLLFAQSAEASTE 426 RAVPAAVGMGAAASLLFAQSAEASTE Sbjct: 142 RAVPAAVGMGAAASLLFAQSAEASTE 167 Score = 143 bits (360), Expect = 7e-33 Identities = 74/86 (86%), Positives = 81/86 (94%) Frame = +1 Query: 169 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 348 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 153 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 212 Query: 349 RAVPAAVGMGAAASLLFAQSAEASTE 426 RAVPAAVGMGAAASLLFAQSAEASTE Sbjct: 213 RAVPAAVGMGAAASLLFAQSAEASTE 238 Score = 143 bits (360), Expect = 7e-33 Identities = 74/86 (86%), Positives = 81/86 (94%) Frame = +1 Query: 169 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 348 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 224 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 283 Query: 349 RAVPAAVGMGAAASLLFAQSAEASTE 426 RAVPAAVGMGAAASLLFAQSAEASTE Sbjct: 284 RAVPAAVGMGAAASLLFAQSAEASTE 309 Score = 95.1 bits (235), Expect = 2e-18 Identities = 47/60 (78%), Positives = 54/60 (90%) Frame = +1 Query: 169 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 348 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL QMDAKNK Sbjct: 295 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLRQMDAKNK 354 [3][TOP] >UniRef100_C1MZ88 Photosystem II PsbY protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MZ88_9CHLO Length = 279 Score = 66.6 bits (161), Expect = 8e-10 Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 8/147 (5%) Frame = +1 Query: 10 MSAPTSAALRSSVRSAKPV----LPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAAS 177 +SA S + S R + V LPVR A V A A + ++G A L+ A Sbjct: 13 VSARVSVRAKVSTRGLRAVGVKPLPVRPAAVRVSASAAAESQTDDLQLGQTAALTLAGAL 72 Query: 178 WMMAGNAQAATE-LASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN--- 345 + A AA+E L+ +A D+RA I +L P +GWV +NI Q N M KN Sbjct: 73 ALGTEQASAASESLSQVAGFDSRALIFLGILGPAIGWVLYNILTPGLNQFNSMQEKNARG 132 Query: 346 KRAVPAAVGMGAAASLLFAQSAEASTE 426 K+ +P +G+ AAA + A+A+TE Sbjct: 133 KKGIPLGLGLSAAALAGMPEQADAATE 159 Score = 53.9 bits (128), Expect = 5e-06 Identities = 41/91 (45%), Positives = 47/91 (51%), Gaps = 3/91 (3%) Frame = +1 Query: 163 SVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAK 342 S AA M A AATEL A D R I VPVLGWV +NI Q+ M K Sbjct: 143 SAAALAGMPEQADAATELMQTAGLDARILIFGAF-VPVLGWVAYNILKPGLNQIEDMQKK 201 Query: 343 N--KRAVPAAV-GMGAAASLLFAQSAEASTE 426 N KR V A V G+ AAA L + A+A+TE Sbjct: 202 NAKKRGVAAGVTGLSAAALLGMPEQADAATE 232 [4][TOP] >UniRef100_C1E7Y4 Photosystem II PsbY protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E7Y4_9CHLO Length = 191 Score = 64.3 bits (155), Expect = 4e-09 Identities = 42/90 (46%), Positives = 51/90 (56%), Gaps = 2/90 (2%) Frame = +1 Query: 163 SVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQM--D 336 S AA M A AATE LA D R I VPVLGWVG+NI G QL +M D Sbjct: 56 SAAALMGMPEAADAATEAMQLADLDARIAIFGAF-VPVLGWVGYNILGPGLKQLEKMQQD 114 Query: 337 AKNKRAVPAAVGMGAAASLLFAQSAEASTE 426 A K+ V A VG+ AAA + ++A+A+TE Sbjct: 115 AAKKKGVAAGVGLSAAALMGMPEAADAATE 144 [5][TOP] >UniRef100_A9U315 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U315_PHYPA Length = 137 Score = 63.5 bits (153), Expect = 7e-09 Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Frame = +1 Query: 139 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 318 V V T ++ A+ + +A A+ ++ +LA DNR L L+P +GWV FNI LQ Sbjct: 2 VNLVCTTGAMFAAMATSESAMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNI---LQP 58 Query: 319 QLNQMD-AKNKRAVPAAVGMGAAASLLFAQSAEASTE 426 LNQ+D + +A+ A G+GAAA+L+ A A+A+ E Sbjct: 59 ALNQVDKMRGAKALVAGAGLGAAATLMAAPHADAAQE 95 [6][TOP] >UniRef100_A9SPH7 PsbY photosystem II polypeptide n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPH7_PHYPA Length = 368 Score = 58.5 bits (140), Expect = 2e-07 Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 12/109 (11%) Frame = +1 Query: 136 KVGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQ 315 K G + L AS +A +A AA E+A+LA SD+R I+ LL+P +GWV FNI Sbjct: 205 KRGVIGALGLGTASLFLAPHADAAQEIATLADSDSRGLIIIGLLLPAVGWVLFNILKPAL 264 Query: 316 AQLNQMDAKNKRAVP-----------AAVGMGAAA-SLLFAQSAEASTE 426 Q+N + N P A G+ AAA SLL A A+A + Sbjct: 265 NQINNIVEGNDTGAPVKRGKKFGGMIGATGISAAAMSLLAAPKADAQVQ 313 [7][TOP] >UniRef100_Q00Y99 Manganese-binding protein PsbY, photosystem II-associated-s (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y99_OSTTA Length = 265 Score = 57.8 bits (138), Expect = 4e-07 Identities = 46/139 (33%), Positives = 63/139 (45%), Gaps = 2/139 (1%) Frame = +1 Query: 10 MSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWMMA 189 + A +A L R AK R A+ S V A+ E S+AA+ + A Sbjct: 10 LRASRAAPLAKRERRAK-----RTAIASKVATKVATIESDEIVTRGQTAAMSLAATMLFA 64 Query: 190 GNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN--KRAVPA 363 A AA E+ LA D R I + PVLGWV +NI G Q M KN + V A Sbjct: 65 DQAHAAQEVGDLAGIDGRIAIFF-VFAPVLGWVAYNILGPGLRQFEDMQKKNAKSKGVLA 123 Query: 364 AVGMGAAASLLFAQSAEAS 420 G+ AAA L ++++A+ Sbjct: 124 GAGLSAAALLGMPEASDAA 142 [8][TOP] >UniRef100_B6SUJ7 Photosystem II core complex proteins psbY n=1 Tax=Zea mays RepID=B6SUJ7_MAIZE Length = 196 Score = 55.8 bits (133), Expect = 1e-06 Identities = 47/136 (34%), Positives = 69/136 (50%) Frame = +1 Query: 13 SAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWMMAG 192 SAP S + S+R +P R + V A S G +A+ + A+ +A Sbjct: 19 SAPPSTSGSVSLR-----VPAR--AKKAAVSASVSSALAGAFFSALASSDAALAAQRVAD 71 Query: 193 NAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVPAAVG 372 A AA A SDNR +L ++ P +GWV +NI LQ LNQ++ +AV A +G Sbjct: 72 VAAAAD-----AGSDNRGQLLLFVVAPAIGWVLYNI---LQPALNQLNRMRSQAVVAGLG 123 Query: 373 MGAAASLLFAQSAEAS 420 +GAAA+ + A + EAS Sbjct: 124 LGAAAAGM-AAAPEAS 138 [9][TOP] >UniRef100_A4S5C8 Possible psbY, PSII-Y, photosystem II polypeptide n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S5C8_OSTLU Length = 416 Score = 54.7 bits (130), Expect = 3e-06 Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 5/136 (3%) Frame = +1 Query: 4 LRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWM 183 + + A A R + R+A+ + RA S VV + + + + G A +++ AAS Sbjct: 9 ITLPARAPARARRTARTAQSARVIARARTSAVVEDEFATDDDVVRRGQTAAMAT-AASMF 67 Query: 184 MAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN-----K 348 A A AA EL A D R I + PVLGWV +NI QL M A N K Sbjct: 68 FADRADAAQELMQTAL-DGRPLIFLAVFGPVLGWVAYNILSPGLRQLENMQAVNAKSSKK 126 Query: 349 RAVPAAVGMGAAASLL 396 RA A G A++L+ Sbjct: 127 RAAGALAGGLTASALM 142 [10][TOP] >UniRef100_B6SQV2 Photosystem II core complex proteins psbY n=1 Tax=Zea mays RepID=B6SQV2_MAIZE Length = 191 Score = 53.5 bits (127), Expect = 7e-06 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 2/135 (1%) Frame = +1 Query: 22 TSAALRSSVRSAKPVLPVRRAVR-SVVVRAQASEEQLGFKVGTVATLSSV-AASWMMAGN 195 T A L+ + ++A P + S+ VR + ++ V +TL+ A+ + + Sbjct: 6 TMALLKPAAKAAARSAPSTSSGSVSLRVRTGQAAKKAALSVSASSTLAGAFLAALASSPD 65 Query: 196 AQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVPAAVGM 375 A A A+ A D+R +L ++ P +GWV +NI QLN+M ++ +AV A +G+ Sbjct: 66 AALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRM--RSSQAVAAGLGL 123 Query: 376 GAAASLLFAQSAEAS 420 GAAA+ A EAS Sbjct: 124 GAAAAAGMAAPPEAS 138