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[1][TOP]
>UniRef100_A8I003 Ycf32-related subunit of photosystem II n=1 Tax=Chlamydomonas
reinhardtii RepID=A8I003_CHLRE
Length = 260
Score = 263 bits (673), Expect = 3e-69
Identities = 142/142 (100%), Positives = 142/142 (100%)
Frame = +1
Query: 1 ALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASW 180
ALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASW
Sbjct: 3 ALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASW 62
Query: 181 MMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVP 360
MMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVP
Sbjct: 63 MMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVP 122
Query: 361 AAVGMGAAASLLFAQSAEASTE 426
AAVGMGAAASLLFAQSAEASTE
Sbjct: 123 AAVGMGAAASLLFAQSAEASTE 144
Score = 143 bits (360), Expect = 7e-33
Identities = 74/86 (86%), Positives = 81/86 (94%)
Frame = +1
Query: 169 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 348
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 130 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVMGWVGFNIFGSLQAQLNQMDAKNK 189
Query: 349 RAVPAAVGMGAAASLLFAQSAEASTE 426
RAVPAAVGMGAAASLLFAQSAEASTE
Sbjct: 190 RAVPAAVGMGAAASLLFAQSAEASTE 215
Score = 95.5 bits (236), Expect = 2e-18
Identities = 47/60 (78%), Positives = 55/60 (91%)
Frame = +1
Query: 169 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 348
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL+QMDAKNK
Sbjct: 201 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLSQMDAKNK 260
[2][TOP]
>UniRef100_A8JKA1 Ycf32-related polyprotein of photosystem II (Fragment) n=1
Tax=Chlamydomonas reinhardtii RepID=A8JKA1_CHLRE
Length = 354
Score = 182 bits (461), Expect = 1e-44
Identities = 96/96 (100%), Positives = 96/96 (100%)
Frame = +1
Query: 139 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 318
VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA
Sbjct: 1 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 60
Query: 319 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTE 426
QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTE
Sbjct: 61 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTE 96
Score = 143 bits (360), Expect = 7e-33
Identities = 74/86 (86%), Positives = 81/86 (94%)
Frame = +1
Query: 169 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 348
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 82 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 141
Query: 349 RAVPAAVGMGAAASLLFAQSAEASTE 426
RAVPAAVGMGAAASLLFAQSAEASTE
Sbjct: 142 RAVPAAVGMGAAASLLFAQSAEASTE 167
Score = 143 bits (360), Expect = 7e-33
Identities = 74/86 (86%), Positives = 81/86 (94%)
Frame = +1
Query: 169 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 348
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 153 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 212
Query: 349 RAVPAAVGMGAAASLLFAQSAEASTE 426
RAVPAAVGMGAAASLLFAQSAEASTE
Sbjct: 213 RAVPAAVGMGAAASLLFAQSAEASTE 238
Score = 143 bits (360), Expect = 7e-33
Identities = 74/86 (86%), Positives = 81/86 (94%)
Frame = +1
Query: 169 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 348
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 224 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 283
Query: 349 RAVPAAVGMGAAASLLFAQSAEASTE 426
RAVPAAVGMGAAASLLFAQSAEASTE
Sbjct: 284 RAVPAAVGMGAAASLLFAQSAEASTE 309
Score = 95.1 bits (235), Expect = 2e-18
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +1
Query: 169 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 348
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL QMDAKNK
Sbjct: 295 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLRQMDAKNK 354
[3][TOP]
>UniRef100_C1MZ88 Photosystem II PsbY protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MZ88_9CHLO
Length = 279
Score = 66.6 bits (161), Expect = 8e-10
Identities = 50/147 (34%), Positives = 72/147 (48%), Gaps = 8/147 (5%)
Frame = +1
Query: 10 MSAPTSAALRSSVRSAKPV----LPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAAS 177
+SA S + S R + V LPVR A V A A + ++G A L+ A
Sbjct: 13 VSARVSVRAKVSTRGLRAVGVKPLPVRPAAVRVSASAAAESQTDDLQLGQTAALTLAGAL 72
Query: 178 WMMAGNAQAATE-LASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN--- 345
+ A AA+E L+ +A D+RA I +L P +GWV +NI Q N M KN
Sbjct: 73 ALGTEQASAASESLSQVAGFDSRALIFLGILGPAIGWVLYNILTPGLNQFNSMQEKNARG 132
Query: 346 KRAVPAAVGMGAAASLLFAQSAEASTE 426
K+ +P +G+ AAA + A+A+TE
Sbjct: 133 KKGIPLGLGLSAAALAGMPEQADAATE 159
Score = 53.9 bits (128), Expect = 5e-06
Identities = 41/91 (45%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Frame = +1
Query: 163 SVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAK 342
S AA M A AATEL A D R I VPVLGWV +NI Q+ M K
Sbjct: 143 SAAALAGMPEQADAATELMQTAGLDARILIFGAF-VPVLGWVAYNILKPGLNQIEDMQKK 201
Query: 343 N--KRAVPAAV-GMGAAASLLFAQSAEASTE 426
N KR V A V G+ AAA L + A+A+TE
Sbjct: 202 NAKKRGVAAGVTGLSAAALLGMPEQADAATE 232
[4][TOP]
>UniRef100_C1E7Y4 Photosystem II PsbY protein n=1 Tax=Micromonas sp. RCC299
RepID=C1E7Y4_9CHLO
Length = 191
Score = 64.3 bits (155), Expect = 4e-09
Identities = 42/90 (46%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = +1
Query: 163 SVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQM--D 336
S AA M A AATE LA D R I VPVLGWVG+NI G QL +M D
Sbjct: 56 SAAALMGMPEAADAATEAMQLADLDARIAIFGAF-VPVLGWVGYNILGPGLKQLEKMQQD 114
Query: 337 AKNKRAVPAAVGMGAAASLLFAQSAEASTE 426
A K+ V A VG+ AAA + ++A+A+TE
Sbjct: 115 AAKKKGVAAGVGLSAAALMGMPEAADAATE 144
[5][TOP]
>UniRef100_A9U315 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U315_PHYPA
Length = 137
Score = 63.5 bits (153), Expect = 7e-09
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Frame = +1
Query: 139 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 318
V V T ++ A+ + +A A+ ++ +LA DNR L L+P +GWV FNI LQ
Sbjct: 2 VNLVCTTGAMFAAMATSESAMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNI---LQP 58
Query: 319 QLNQMD-AKNKRAVPAAVGMGAAASLLFAQSAEASTE 426
LNQ+D + +A+ A G+GAAA+L+ A A+A+ E
Sbjct: 59 ALNQVDKMRGAKALVAGAGLGAAATLMAAPHADAAQE 95
[6][TOP]
>UniRef100_A9SPH7 PsbY photosystem II polypeptide n=1 Tax=Physcomitrella patens
subsp. patens RepID=A9SPH7_PHYPA
Length = 368
Score = 58.5 bits (140), Expect = 2e-07
Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Frame = +1
Query: 136 KVGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQ 315
K G + L AS +A +A AA E+A+LA SD+R I+ LL+P +GWV FNI
Sbjct: 205 KRGVIGALGLGTASLFLAPHADAAQEIATLADSDSRGLIIIGLLLPAVGWVLFNILKPAL 264
Query: 316 AQLNQMDAKNKRAVP-----------AAVGMGAAA-SLLFAQSAEASTE 426
Q+N + N P A G+ AAA SLL A A+A +
Sbjct: 265 NQINNIVEGNDTGAPVKRGKKFGGMIGATGISAAAMSLLAAPKADAQVQ 313
[7][TOP]
>UniRef100_Q00Y99 Manganese-binding protein PsbY, photosystem II-associated-s (ISS)
n=1 Tax=Ostreococcus tauri RepID=Q00Y99_OSTTA
Length = 265
Score = 57.8 bits (138), Expect = 4e-07
Identities = 46/139 (33%), Positives = 63/139 (45%), Gaps = 2/139 (1%)
Frame = +1
Query: 10 MSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWMMA 189
+ A +A L R AK R A+ S V A+ E S+AA+ + A
Sbjct: 10 LRASRAAPLAKRERRAK-----RTAIASKVATKVATIESDEIVTRGQTAAMSLAATMLFA 64
Query: 190 GNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN--KRAVPA 363
A AA E+ LA D R I + PVLGWV +NI G Q M KN + V A
Sbjct: 65 DQAHAAQEVGDLAGIDGRIAIFF-VFAPVLGWVAYNILGPGLRQFEDMQKKNAKSKGVLA 123
Query: 364 AVGMGAAASLLFAQSAEAS 420
G+ AAA L ++++A+
Sbjct: 124 GAGLSAAALLGMPEASDAA 142
[8][TOP]
>UniRef100_B6SUJ7 Photosystem II core complex proteins psbY n=1 Tax=Zea mays
RepID=B6SUJ7_MAIZE
Length = 196
Score = 55.8 bits (133), Expect = 1e-06
Identities = 47/136 (34%), Positives = 69/136 (50%)
Frame = +1
Query: 13 SAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWMMAG 192
SAP S + S+R +P R + V A S G +A+ + A+ +A
Sbjct: 19 SAPPSTSGSVSLR-----VPAR--AKKAAVSASVSSALAGAFFSALASSDAALAAQRVAD 71
Query: 193 NAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVPAAVG 372
A AA A SDNR +L ++ P +GWV +NI LQ LNQ++ +AV A +G
Sbjct: 72 VAAAAD-----AGSDNRGQLLLFVVAPAIGWVLYNI---LQPALNQLNRMRSQAVVAGLG 123
Query: 373 MGAAASLLFAQSAEAS 420
+GAAA+ + A + EAS
Sbjct: 124 LGAAAAGM-AAAPEAS 138
[9][TOP]
>UniRef100_A4S5C8 Possible psbY, PSII-Y, photosystem II polypeptide n=1
Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S5C8_OSTLU
Length = 416
Score = 54.7 bits (130), Expect = 3e-06
Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Frame = +1
Query: 4 LRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWM 183
+ + A A R + R+A+ + RA S VV + + + + G A +++ AAS
Sbjct: 9 ITLPARAPARARRTARTAQSARVIARARTSAVVEDEFATDDDVVRRGQTAAMAT-AASMF 67
Query: 184 MAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN-----K 348
A A AA EL A D R I + PVLGWV +NI QL M A N K
Sbjct: 68 FADRADAAQELMQTAL-DGRPLIFLAVFGPVLGWVAYNILSPGLRQLENMQAVNAKSSKK 126
Query: 349 RAVPAAVGMGAAASLL 396
RA A G A++L+
Sbjct: 127 RAAGALAGGLTASALM 142
[10][TOP]
>UniRef100_B6SQV2 Photosystem II core complex proteins psbY n=1 Tax=Zea mays
RepID=B6SQV2_MAIZE
Length = 191
Score = 53.5 bits (127), Expect = 7e-06
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Frame = +1
Query: 22 TSAALRSSVRSAKPVLPVRRAVR-SVVVRAQASEEQLGFKVGTVATLSSV-AASWMMAGN 195
T A L+ + ++A P + S+ VR + ++ V +TL+ A+ + +
Sbjct: 6 TMALLKPAAKAAARSAPSTSSGSVSLRVRTGQAAKKAALSVSASSTLAGAFLAALASSPD 65
Query: 196 AQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVPAAVGM 375
A A A+ A D+R +L ++ P +GWV +NI QLN+M ++ +AV A +G+
Sbjct: 66 AALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRM--RSSQAVAAGLGL 123
Query: 376 GAAASLLFAQSAEAS 420
GAAA+ A EAS
Sbjct: 124 GAAAAAGMAAPPEAS 138