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[1][TOP]
>UniRef100_Q9SPI9 Photosystem II reaction center W protein, chloroplastic n=2
Tax=Chlamydomonas reinhardtii RepID=PSBW_CHLRE
Length = 115
Score = 199 bits (505), Expect = 1e-49
Identities = 99/99 (100%), Positives = 99/99 (100%)
Frame = +3
Query: 33 MQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFAL 212
MQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFAL
Sbjct: 1 MQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFAL 60
Query: 213 VDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIG 329
VDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIG
Sbjct: 61 VDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIG 99
[2][TOP]
>UniRef100_Q41387 Photosystem II reaction center W protein, chloroplastic n=1
Tax=Spinacia oleracea RepID=PSBW_SPIOL
Length = 137
Score = 72.0 bits (175), Expect = 2e-11
Identities = 30/67 (44%), Positives = 48/67 (71%)
Frame = +3
Query: 126 TTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGT 305
TT + + ++L+ A ++PA ALVDERM+ +GTG PFG+++ +LGW+L GVFG
Sbjct: 56 TTTTTNKSMGASLLAAAAAATISNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGL 115
Query: 306 MWAIWFI 326
+WA++F+
Sbjct: 116 IWALYFV 122
[3][TOP]
>UniRef100_C6SYI0 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SYI0_SOYBN
Length = 132
Score = 70.9 bits (172), Expect = 4e-11
Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 11/103 (10%)
Frame = +3
Query: 51 RAPRVAAKPVSRSGARS-AVTVVCKATTVRSEVAKK----------VAMLSTLPATLAAH 197
RA V +PV S + + + KA VR + +K ++L+ A +
Sbjct: 15 RAGLVLKRPVGASSSTVLGLPAMAKAGKVRCSMEEKPSSSSNIGMGASLLAAAVAATMSS 74
Query: 198 PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F+
Sbjct: 75 PAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFV 117
[4][TOP]
>UniRef100_C1FIQ5 Photosystem II 13kD protein, chloroplast n=1 Tax=Micromonas sp.
RCC299 RepID=C1FIQ5_9CHLO
Length = 118
Score = 69.3 bits (168), Expect = 1e-10
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 2/89 (2%)
Frame = +3
Query: 63 VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAH--PAFALVDERMNGD 236
VAAKP +R AR A V KAT ++ V KK A+LS L A PA A+VDER+NGD
Sbjct: 12 VAAKPAARKVARKAT--VAKATVAKASVPKK-AVLSAAVTGLVAQTLPALAVVDERLNGD 68
Query: 237 GTGRPFGVNDPVLGWVLLGVFGTMWAIWF 323
GTG G+ND +LG++LL + +++ +F
Sbjct: 69 GTGLILGINDEILGFILLTIPALVFSQFF 97
[5][TOP]
>UniRef100_C6T2W3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T2W3_SOYBN
Length = 133
Score = 68.9 bits (167), Expect = 2e-10
Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 12/104 (11%)
Frame = +3
Query: 51 RAPRVAAKPVSRSGARS-AVTVVCKATTVRSEVAKKVAMLSTL-----------PATLAA 194
R V +PV S + + + KA VR + +K + S L AT+++
Sbjct: 15 RTGHVLKRPVGASSSTVLGLPAMAKAGRVRCSMEEKPSSSSNLGMGASLLAAAAAATMSS 74
Query: 195 HPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
A ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F+
Sbjct: 75 PAAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALFFV 118
[6][TOP]
>UniRef100_A7PUM2 Chromosome chr7 scaffold_31, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PUM2_VITVI
Length = 135
Score = 68.9 bits (167), Expect = 2e-10
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 17/107 (15%)
Frame = +3
Query: 57 PRVAAKP----VSRSGARSAVTVVCKATTVRSEVAKK-------------VAMLSTLPAT 185
PRV +P V S A + V+ K V + +K ++++ A
Sbjct: 14 PRVGLRPNGGTVGTSSAILGLPVMAKKGRVTCSMKEKPSVEDGSLKMGMGASLMAAACAA 73
Query: 186 LAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
+ PA ALVDERM+ +GTG PFG+++ LGW+L GVFG +WA++F+
Sbjct: 74 TMSSPAMALVDERMSTEGTGLPFGLSNNTLGWILFGVFGLIWALYFV 120
[7][TOP]
>UniRef100_C6SWM3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SWM3_SOYBN
Length = 136
Score = 68.6 bits (166), Expect = 2e-10
Identities = 35/104 (33%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Frame = +3
Query: 27 IKMQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAH--- 197
++ ++L +P + + + G R + ++ K ++V+ + + M ++L A +A
Sbjct: 19 VQKRSLGFSSPVLGLPAMGKVG-RVSCSMEEKPSSVKESSSSMLGMGASLMAAASAAAMS 77
Query: 198 -PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F+
Sbjct: 78 GPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFV 121
[8][TOP]
>UniRef100_B7FHC2 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FHC2_MEDTR
Length = 136
Score = 67.8 bits (164), Expect = 4e-10
Identities = 32/60 (53%), Positives = 46/60 (76%)
Frame = +3
Query: 147 AKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
A +A +S ATL++ A ALVDERM+ +GTG PFG+++ +LGW+L GVFG +WA++FI
Sbjct: 64 ASLIAAISA--ATLSSPAAMALVDERMSTEGTGLPFGLSNNLLGWLLFGVFGLIWALYFI 121
[9][TOP]
>UniRef100_B9SZ65 Photosystem II reaction center W protein, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9SZ65_RICCO
Length = 134
Score = 67.4 bits (163), Expect = 5e-10
Identities = 33/63 (52%), Positives = 46/63 (73%)
Frame = +3
Query: 138 SEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAI 317
S VA VA S + AT A PA ALVDERM+ +GTG PFG+++ +LGW+LLGVF +W++
Sbjct: 59 SMVASMVAAASAVAAT--AGPAMALVDERMSTEGTGLPFGLSNNLLGWILLGVFALIWSL 116
Query: 318 WFI 326
+ +
Sbjct: 117 YTV 119
[10][TOP]
>UniRef100_B4FUI4 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B4FUI4_MAIZE
Length = 127
Score = 67.0 bits (162), Expect = 6e-10
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 11/99 (11%)
Frame = +3
Query: 63 VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA-----------TLAAHPAFA 209
VA ++R A + ++ VR AK A +ST A T +A PA A
Sbjct: 13 VARAAIARPNALGLPALRARSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTASAGPALA 72
Query: 210 LVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
LVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ I
Sbjct: 73 LVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTI 111
[11][TOP]
>UniRef100_A7QVP6 Chromosome chr14 scaffold_190, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QVP6_VITVI
Length = 135
Score = 67.0 bits (162), Expect = 6e-10
Identities = 31/67 (46%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Frame = +3
Query: 138 SEVAKKVAMLSTLPATLAA-----HPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFG 302
S++ ++M ++L A AA PA ALVDER++ +GTG PFG+++ +LGW+L GVFG
Sbjct: 53 SDMGSSISMGASLMAAAAAVAASAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFG 112
Query: 303 TMWAIWF 323
+WA++F
Sbjct: 113 LIWALYF 119
[12][TOP]
>UniRef100_B6TM37 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B6TM37_MAIZE
Length = 127
Score = 66.2 bits (160), Expect = 1e-09
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Frame = +3
Query: 63 VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA-----------TLAAHPAFA 209
VA ++R A + + VR AK A +ST A T +A PA A
Sbjct: 13 VARAAIARPNALGLPALRASSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTASAGPALA 72
Query: 210 LVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
LVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ I
Sbjct: 73 LVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTI 111
[13][TOP]
>UniRef100_A9SEQ6 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9SEQ6_PHYPA
Length = 142
Score = 66.2 bits (160), Expect = 1e-09
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Frame = +3
Query: 60 RVAAKPVSRSGARSAVTVVCKATTVRSEVAK-----KVAMLSTLPATLA-AHPAFALVDE 221
R AA+PV+ + +VC S ++A T AT+A AHP FALVDE
Sbjct: 32 RAAARPVAGVPVLAMPRIVCSLEKKESNKGDVNGLPQLAAAVTSAATMAYAHPVFALVDE 91
Query: 222 RMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWF 323
R++ +GTG GV++P L W+L+GV +WA++F
Sbjct: 92 RLSTEGTGLGLGVSNPKLTWILVGVTALVWAVYF 125
[14][TOP]
>UniRef100_Q41908 Photosystem II 7kD protein n=1 Tax=Arabidopsis thaliana
RepID=Q41908_ARATH
Length = 133
Score = 65.9 bits (159), Expect = 1e-09
Identities = 32/91 (35%), Positives = 52/91 (57%)
Frame = +3
Query: 54 APRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNG 233
AP + P+ + ++ K T +S A + + ++PA ALVDERM+
Sbjct: 28 APVLGLPPMGKKKGGVRCSMETKKETSQSWGPGVSAAATAALTAVMSNPAMALVDERMST 87
Query: 234 DGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
+GTG PFG+++ +LGW+L GVFG +W +F+
Sbjct: 88 EGTGLPFGLSNNLLGWILFGVFGLIWTFFFV 118
[15][TOP]
>UniRef100_C5XLL1 Putative uncharacterized protein Sb03g036090 n=1 Tax=Sorghum
bicolor RepID=C5XLL1_SORBI
Length = 126
Score = 65.5 bits (158), Expect = 2e-09
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 13/111 (11%)
Frame = +3
Query: 33 MQALSARAPR--VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA-------- 182
M +SA A VA ++R A + ++ VR AK A +S A
Sbjct: 1 MATVSAAAATTVVARAAIARPNALGLPQLRARSERVRCSYAKDAAAVSAKAAGASLLAAA 60
Query: 183 ---TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
T +A PA ALVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ +
Sbjct: 61 GAVTASAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTV 111
[16][TOP]
>UniRef100_A5C3A9 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5C3A9_VITVI
Length = 70
Score = 65.5 bits (158), Expect = 2e-09
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = +3
Query: 162 MLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWF 323
M + +A PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F
Sbjct: 1 MAAAAAVAASAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYF 54
[17][TOP]
>UniRef100_C6SWZ8 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SWZ8_SOYBN
Length = 133
Score = 65.1 bits (157), Expect = 2e-09
Identities = 25/56 (44%), Positives = 42/56 (75%)
Frame = +3
Query: 159 AMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
++++ A + PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +W ++F+
Sbjct: 63 SLMAAASAAAMSGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFV 118
[18][TOP]
>UniRef100_B9S4T1 Photosystem II reaction center W protein, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9S4T1_RICCO
Length = 132
Score = 65.1 bits (157), Expect = 2e-09
Identities = 26/64 (40%), Positives = 45/64 (70%)
Frame = +3
Query: 135 RSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWA 314
RS ++++++ + PA ALVDER++ +GTG PFG+++ +LGW+LLGVFG +W+
Sbjct: 54 RSNKGMSASLIASICGVTMSSPALALVDERLSTEGTGLPFGLSNNLLGWILLGVFGLIWS 113
Query: 315 IWFI 326
+ +
Sbjct: 114 FYTV 117
[19][TOP]
>UniRef100_A1YMY4 Component of 6.1 kDa polypeptide of photosystem II reaction center
n=1 Tax=Brassica rapa RepID=A1YMY4_BRACM
Length = 133
Score = 65.1 bits (157), Expect = 2e-09
Identities = 32/94 (34%), Positives = 54/94 (57%)
Frame = +3
Query: 42 LSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDE 221
++ AP + P+ + ++ K V + A A + + ++PA ALVD+
Sbjct: 24 VAVSAPVLGLPPMGKRKGGVRCSMEPKQGNVSAVGAGVSAAATAALTAVMSNPAMALVDD 83
Query: 222 RMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWF 323
RM+ +GTG PFG+++ +LGW+LLGVFG +W +F
Sbjct: 84 RMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYF 117
[20][TOP]
>UniRef100_Q39194 Photosystem II reaction center W protein, chloroplastic n=2
Tax=Arabidopsis thaliana RepID=PSBW_ARATH
Length = 133
Score = 65.1 bits (157), Expect = 2e-09
Identities = 32/91 (35%), Positives = 51/91 (56%)
Frame = +3
Query: 54 APRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNG 233
AP + P+ + ++ K V A A + + ++PA ALVDERM+
Sbjct: 28 APVLGLPPMGKKKGGVRCSMETKQGNVSVMGAGVSAAATAALTAVMSNPAMALVDERMST 87
Query: 234 DGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
+GTG PFG+++ +LGW+L GVFG +W +F+
Sbjct: 88 EGTGLPFGLSNNLLGWILFGVFGLIWTFFFV 118
[21][TOP]
>UniRef100_B6T2W4 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B6T2W4_MAIZE
Length = 131
Score = 64.7 bits (156), Expect = 3e-09
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Frame = +3
Query: 12 ANSTNIKMQALSARAPRVA------AKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLST 173
A T + AL AR+ RV A PVS GA +++ A T
Sbjct: 23 ALGTYAGLPALRARSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTA------------- 69
Query: 174 LPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
+A PA ALVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ I
Sbjct: 70 -----SAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTI 115
[22][TOP]
>UniRef100_B6SMK2 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B6SMK2_MAIZE
Length = 130
Score = 64.7 bits (156), Expect = 3e-09
Identities = 41/106 (38%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Frame = +3
Query: 21 TNIKMQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA----TL 188
T I +A AR P P R+ + K + V+ K A S L A T
Sbjct: 10 TTIVARAAIAR-PNALGLPALRARSERVRCSYAKDAKNAAPVSTKGAGASLLAAAGAVTA 68
Query: 189 AAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
+A PA ALVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ I
Sbjct: 69 SAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTI 114
[23][TOP]
>UniRef100_B9GS65 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=B9GS65_POPTR
Length = 134
Score = 64.3 bits (155), Expect = 4e-09
Identities = 29/68 (42%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Frame = +3
Query: 129 TVRSEVAK--KVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFG 302
TV E +K ++++ + A + PA ALVDERM+ +GTG PFG+++ +L W+LLGVF
Sbjct: 52 TVEEEKSKGMSASLMAAVCAATISSPALALVDERMSTEGTGLPFGLSNNLLVWILLGVFA 111
Query: 303 TMWAIWFI 326
+W+++F+
Sbjct: 112 FIWSLYFV 119
[24][TOP]
>UniRef100_Q9AXP0 PSII subunit PsbW (Fragment) n=1 Tax=Physcomitrella patens
RepID=Q9AXP0_PHYPA
Length = 109
Score = 63.5 bits (153), Expect = 7e-09
Identities = 36/90 (40%), Positives = 53/90 (58%), Gaps = 6/90 (6%)
Frame = +3
Query: 72 KPVSRSGARSAVTVVCKATTVRSEVAK-----KVAMLSTLPATLA-AHPAFALVDERMNG 233
+PVS A +VC A S+ + ++A T ATLA AHP FALVDER++
Sbjct: 2 EPVSGLPALRMPKIVCSAEKKESQTEELSGFPQLAAAVTSAATLAYAHPVFALVDERLST 61
Query: 234 DGTGRPFGVNDPVLGWVLLGVFGTMWAIWF 323
+GTG G+++ L W+L+GV +WA++F
Sbjct: 62 EGTGLGLGISNTKLTWILVGVTALIWALYF 91
[25][TOP]
>UniRef100_B9ET99 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9ET99_ORYSJ
Length = 107
Score = 63.5 bits (153), Expect = 7e-09
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 8/86 (9%)
Frame = +3
Query: 93 ARSAVTVVCKATT--------VRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGR 248
A +A +VV +A +R+ +++ A S L A PA ALVDERM+ +GTG
Sbjct: 6 AAAATSVVARAVLAGPLGLPQMRARRSERGAGASLLAMAATAAPAMALVDERMSTEGTGL 65
Query: 249 PFGVNDPVLGWVLLGVFGTMWAIWFI 326
G+++ +LGW+LLGVFG +W+++ I
Sbjct: 66 SLGLSNNLLGWILLGVFGLIWSLYTI 91
[26][TOP]
>UniRef100_A9PJA9 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJA9_9ROSI
Length = 133
Score = 63.2 bits (152), Expect = 9e-09
Identities = 28/96 (29%), Positives = 54/96 (56%)
Frame = +3
Query: 39 ALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVD 218
++ + V P + + ++ K T ++++ + A + PA ALVD
Sbjct: 23 SVGVSSSHVLGLPAIAKKGKVSCSMEGKPTVEEKSKGMSASLMAAVCAATISSPALALVD 82
Query: 219 ERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
ER++ +GTG PFG+++ +L W+LLGVF +W+++F+
Sbjct: 83 ERLSTEGTGLPFGLSNNLLVWILLGVFAFIWSLYFV 118
[27][TOP]
>UniRef100_Q5ZBY9 Photosystem II reaction center W protein, chloroplastic n=3
Tax=Oryza sativa RepID=PSBW_ORYSJ
Length = 124
Score = 63.2 bits (152), Expect = 9e-09
Identities = 34/90 (37%), Positives = 52/90 (57%)
Frame = +3
Query: 57 PRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGD 236
P++ A+ R + A V+ A +AM +T A PA ALVDERM+ +
Sbjct: 25 PQMRARRSERVRCNYSKEAATPAAAVKGAGASLLAMAAT------AAPAMALVDERMSTE 78
Query: 237 GTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
GTG G+++ +LGW+LLGVFG +W+++ I
Sbjct: 79 GTGLSLGLSNNLLGWILLGVFGLIWSLYTI 108
[28][TOP]
>UniRef100_A9PEP9 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PEP9_POPTR
Length = 134
Score = 62.8 bits (151), Expect = 1e-08
Identities = 31/95 (32%), Positives = 52/95 (54%)
Frame = +3
Query: 39 ALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVD 218
+L V P R + ++ K + ++++ + A + PA ALVD
Sbjct: 24 SLGVSCSPVLGLPAMAKKGRVSCSMEGKPSVEEKCKGMSASLMAAVCAASMSSPALALVD 83
Query: 219 ERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWF 323
ERM+ +GTG PFG+++ +L W+LLGVF +WA++F
Sbjct: 84 ERMSTEGTGLPFGLSNNLLVWILLGVFALIWALYF 118
[29][TOP]
>UniRef100_C1N1F2 Photosystem II 13kD protein, chloroplast n=1 Tax=Micromonas pusilla
CCMP1545 RepID=C1N1F2_9CHLO
Length = 119
Score = 62.0 bits (149), Expect = 2e-08
Identities = 37/80 (46%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Frame = +3
Query: 63 VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAH--PAFALVDERMNGD 236
+ AKP++R ++ VV KAT +++ K A+LS +LAA PA A+VDER+NGD
Sbjct: 12 LVAKPLARK-VQARKAVVSKATVAKAQAPTK-AVLSAAVVSLAAQALPALAVVDERLNGD 69
Query: 237 GTGRPFGVNDPVLGWVLLGV 296
GTG G+ND +LG+VLL +
Sbjct: 70 GTGLILGLNDELLGFVLLTI 89
[30][TOP]
>UniRef100_Q8W536 Photosystem II reaction center (Fragment) n=1 Tax=Retama raetam
RepID=Q8W536_9FABA
Length = 96
Score = 61.2 bits (147), Expect = 3e-08
Identities = 26/55 (47%), Positives = 38/55 (69%)
Frame = +3
Query: 162 MLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
M + A + PA ALVDER++ +GTG PFG+++ +LGW+L VFG +W +FI
Sbjct: 27 MAAACAAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFVVFGLIWTFYFI 81
[31][TOP]
>UniRef100_A9SEQ5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SEQ5_PHYPA
Length = 64
Score = 58.9 bits (141), Expect = 2e-07
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = +3
Query: 192 AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWF 323
AHP FALVDER++ +GTG GV++P L W+L+GV +WA++F
Sbjct: 4 AHPVFALVDERLSTEGTGLGLGVSNPKLTWILVGVTALVWAVYF 47
[32][TOP]
>UniRef100_Q9AXN8 PSII subunit PsbW (Fragment) n=1 Tax=Physcomitrella patens
RepID=Q9AXN8_PHYPA
Length = 158
Score = 58.5 bits (140), Expect = 2e-07
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
Frame = +3
Query: 18 STNIKMQALSARAPRVAA--KPVSRSGARSAVTVVCKATTVRSEVAK-----KVAMLSTL 176
+T + +L++ + AA KPV+ A VVC A S+ + ++A T
Sbjct: 21 ATRLATTSLASSSSGFAATLKPVAGLPALRMPKVVCAAERSESKAERVNGVAQLAAAVTS 80
Query: 177 PATLA-AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
ATLA +HP ALVDER++ +GTG G+++ L W+L+GV +W ++ +
Sbjct: 81 AATLAYSHPVLALVDERLSTEGTGLGLGISNTKLTWILVGVTALIWTLYLL 131
[33][TOP]
>UniRef100_B6TMB3 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B6TMB3_MAIZE
Length = 127
Score = 58.5 bits (140), Expect = 2e-07
Identities = 23/56 (41%), Positives = 40/56 (71%)
Frame = +3
Query: 159 AMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
++L+ + + P ALVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ +
Sbjct: 57 SLLAVATSAVTTSPXLALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTV 112
[34][TOP]
>UniRef100_A4RT20 Photosystem II reaction center W protein, chloroplast n=1
Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RT20_OSTLU
Length = 162
Score = 58.5 bits (140), Expect = 2e-07
Identities = 29/74 (39%), Positives = 45/74 (60%)
Frame = +3
Query: 105 VTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWV 284
+ +V + T E+ K+VA L + + PA A+VD+R+NGDGTG P G+ND LG +
Sbjct: 68 IRLVTMSATAPQEMGKRVAGSFALSSMVNVLPALAIVDDRLNGDGTGLPLGINDGALGII 127
Query: 285 LLGVFGTMWAIWFI 326
L V ++ ++FI
Sbjct: 128 LATVPLAIFGLYFI 141
[35][TOP]
>UniRef100_Q7XYI4 Photosystem II protein PsbW n=1 Tax=Bigelowiella natans
RepID=Q7XYI4_BIGNA
Length = 147
Score = 58.2 bits (139), Expect = 3e-07
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Frame = +3
Query: 18 STNIKMQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRS-EVAKKVAMLSTLPATLAA 194
S+ + L A A R PVS A T K + ++ + +K + L A A
Sbjct: 24 SSALSSSNLGATAIRSRVSPVSSVRAGRMATFAQKPSMKQNMQNFQKTMGAAGLAAVGAL 83
Query: 195 H--PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIW 320
H PA ALVD R+NGDG G P G+ND L ++L GVF T+W ++
Sbjct: 84 HQLPAEALVDSRLNGDGAGIPLGLNDSRLFFILAGVFTTVWGVY 127
[36][TOP]
>UniRef100_Q01EE1 Photosystem II 13kD Protein, chloroplast (Putative) (IC) n=1
Tax=Ostreococcus tauri RepID=Q01EE1_OSTTA
Length = 156
Score = 58.2 bits (139), Expect = 3e-07
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Frame = +3
Query: 9 RANSTNIKMQALSARAPRVAAKPVSRSGARSAVT----VVCKATTVRSEVAKKVAMLSTL 176
R S+ I + LS+ +P P R+G R A V +AT E K+V S L
Sbjct: 28 RDKSSTIMLTILSSLSPICNLSP-RRAGPRQASNQRHGVTVRATP--QEAGKQVFGTSML 84
Query: 177 PATL-AAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 326
+++ PA A+VD+R+NGDGTG P G+ND LG +L V +++++FI
Sbjct: 85 ISSMNTVLPALAIVDDRLNGDGTGLPLGINDGALGIILASVPLAIFSLYFI 135
[37][TOP]
>UniRef100_C0PQQ7 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=C0PQQ7_PICSI
Length = 149
Score = 58.2 bits (139), Expect = 3e-07
Identities = 23/47 (48%), Positives = 37/47 (78%)
Frame = +3
Query: 183 TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWF 323
T++ AFALVDER++ +GTG G+++P+LGW+L+GVF +W ++F
Sbjct: 87 TVSTKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWILYF 133
[38][TOP]
>UniRef100_A9NLC2 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NLC2_PICSI
Length = 146
Score = 58.2 bits (139), Expect = 3e-07
Identities = 23/47 (48%), Positives = 37/47 (78%)
Frame = +3
Query: 183 TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWF 323
T++ AFALVDER++ +GTG G+++P+LGW+L+GVF +W ++F
Sbjct: 84 TVSTKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWILYF 130
[39][TOP]
>UniRef100_A9NL01 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NL01_PICSI
Length = 146
Score = 58.2 bits (139), Expect = 3e-07
Identities = 23/47 (48%), Positives = 37/47 (78%)
Frame = +3
Query: 183 TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWF 323
T++ AFALVDER++ +GTG G+++P+LGW+L+GVF +W ++F
Sbjct: 84 TVSTKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWILYF 130
[40][TOP]
>UniRef100_Q9AXN9 PSII subunit PsbW (Fragment) n=2 Tax=Physcomitrella patens
RepID=Q9AXN9_PHYPA
Length = 69
Score = 57.0 bits (136), Expect = 6e-07
Identities = 26/49 (53%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = +3
Query: 180 ATLA-AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWF 323
ATLA AHP FALVDER++ +GTG G+++ L W+L+GV +WA++F
Sbjct: 4 ATLAYAHPVFALVDERLSTEGTGLGLGISNTKLTWILVGVTALIWALYF 52
[41][TOP]
>UniRef100_B5A4J5 Photosystem II reaction center W protein n=1 Tax=Gymnochlora
stellata RepID=B5A4J5_GYMST
Length = 147
Score = 56.6 bits (135), Expect = 8e-07
Identities = 36/87 (41%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Frame = +3
Query: 75 PVSRSGARSAVTVVCKATTVRSEVAKKVAMLST---LPATLAAH--PAFALVDERMNGDG 239
P +R AR T V + +E K L AT A H PA ALVD R+NGDG
Sbjct: 41 PATRMMARQGRTAVYAKKGLNTESLKNFQRNMAAVGLSATAALHQLPAEALVDARLNGDG 100
Query: 240 TGRPFGVNDPVLGWVLLGVFGTMWAIW 320
G P G+ND L ++L GVF +WA +
Sbjct: 101 AGIPLGINDSRLFFILAGVFTLVWAAY 127
[42][TOP]
>UniRef100_UPI0001B4E4AC transcriptional regulator, SARP family protein n=1 Tax=Streptomyces
hygroscopicus ATCC 53653 RepID=UPI0001B4E4AC
Length = 1279
Score = 54.7 bits (130), Expect = 3e-06
Identities = 36/95 (37%), Positives = 45/95 (47%)
Frame = -1
Query: 329 ADEPDSPHGAEDAQQDPAQDGVVHAEGAASAVAVHALIDQGEGGVGSQGSRQGAQHGDLL 150
A E + G+ A D + G +A GA A G G G GS GA+ G +
Sbjct: 251 ASEDRTGSGSGPAPGDGSAPGAAYASGAGHAPG------DGTGPGGGYGS--GARPGPGV 302
Query: 149 GHLAADGGGLAHHGHGRASAGAAHGLGSHAGGASG 45
GH+ DG G H GR + GA H GS AGGA+G
Sbjct: 303 GHVPGDGAGAGHVPGGRTAPGAGHAPGSGAGGAAG 337
[43][TOP]
>UniRef100_A2SY30 Photosystem II reaction center W protein n=1 Tax=Mesostigma viride
RepID=A2SY30_MESVI
Length = 128
Score = 53.1 bits (126), Expect = 9e-06
Identities = 35/95 (36%), Positives = 54/95 (56%)
Frame = +3
Query: 36 QALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALV 215
Q L AR P+ AA+ V AR AV VC+A + VA A +++ A A PA A++
Sbjct: 22 QRLVARKPQAAAR-VPAKCARKAV--VCQAQKNEAAVAVSAAAIASSVAFAA--PAQAII 76
Query: 216 DERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIW 320
++ M +G G G+N LG+V+LG F +W+++
Sbjct: 77 EDAMYTEGAGIALGLNSGALGFVMLGAFTLVWSLY 111