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[1][TOP] >UniRef100_A8I003 Ycf32-related subunit of photosystem II n=1 Tax=Chlamydomonas reinhardtii RepID=A8I003_CHLRE Length = 260 Score = 259 bits (663), Expect = 5e-68 Identities = 140/140 (100%), Positives = 140/140 (100%) Frame = +1 Query: 73 ALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASW 252 ALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASW Sbjct: 3 ALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASW 62 Query: 253 MMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVP 432 MMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVP Sbjct: 63 MMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVP 122 Query: 433 AAVGMGAAASLLFAQSAEAS 492 AAVGMGAAASLLFAQSAEAS Sbjct: 123 AAVGMGAAASLLFAQSAEAS 142 Score = 139 bits (350), Expect = 1e-31 Identities = 72/84 (85%), Positives = 79/84 (94%) Frame = +1 Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 420 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 130 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVMGWVGFNIFGSLQAQLNQMDAKNK 189 Query: 421 RAVPAAVGMGAAASLLFAQSAEAS 492 RAVPAAVGMGAAASLLFAQSAEAS Sbjct: 190 RAVPAAVGMGAAASLLFAQSAEAS 213 Score = 95.5 bits (236), Expect = 2e-18 Identities = 47/60 (78%), Positives = 55/60 (91%) Frame = +1 Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 420 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL+QMDAKNK Sbjct: 201 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLSQMDAKNK 260 [2][TOP] >UniRef100_A8JKA1 Ycf32-related polyprotein of photosystem II (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8JKA1_CHLRE Length = 354 Score = 178 bits (451), Expect = 2e-43 Identities = 94/94 (100%), Positives = 94/94 (100%) Frame = +1 Query: 211 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 390 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA Sbjct: 1 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 60 Query: 391 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEAS 492 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEAS Sbjct: 61 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEAS 94 Score = 139 bits (350), Expect = 1e-31 Identities = 72/84 (85%), Positives = 79/84 (94%) Frame = +1 Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 420 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 82 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 141 Query: 421 RAVPAAVGMGAAASLLFAQSAEAS 492 RAVPAAVGMGAAASLLFAQSAEAS Sbjct: 142 RAVPAAVGMGAAASLLFAQSAEAS 165 Score = 139 bits (350), Expect = 1e-31 Identities = 72/84 (85%), Positives = 79/84 (94%) Frame = +1 Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 420 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 153 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 212 Query: 421 RAVPAAVGMGAAASLLFAQSAEAS 492 RAVPAAVGMGAAASLLFAQSAEAS Sbjct: 213 RAVPAAVGMGAAASLLFAQSAEAS 236 Score = 139 bits (350), Expect = 1e-31 Identities = 72/84 (85%), Positives = 79/84 (94%) Frame = +1 Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 420 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 224 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 283 Query: 421 RAVPAAVGMGAAASLLFAQSAEAS 492 RAVPAAVGMGAAASLLFAQSAEAS Sbjct: 284 RAVPAAVGMGAAASLLFAQSAEAS 307 Score = 95.1 bits (235), Expect = 2e-18 Identities = 47/60 (78%), Positives = 54/60 (90%) Frame = +1 Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 420 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL QMDAKNK Sbjct: 295 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLRQMDAKNK 354 [3][TOP] >UniRef100_C1MZ88 Photosystem II PsbY protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MZ88_9CHLO Length = 279 Score = 62.8 bits (151), Expect = 1e-08 Identities = 48/145 (33%), Positives = 70/145 (48%), Gaps = 8/145 (5%) Frame = +1 Query: 82 MSAPTSAALRSSVRSAKPV----LPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAAS 249 +SA S + S R + V LPVR A V A A + ++G A L+ A Sbjct: 13 VSARVSVRAKVSTRGLRAVGVKPLPVRPAAVRVSASAAAESQTDDLQLGQTAALTLAGAL 72 Query: 250 WMMAGNAQAATE-LASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN--- 417 + A AA+E L+ +A D+RA I +L P +GWV +NI Q N M KN Sbjct: 73 ALGTEQASAASESLSQVAGFDSRALIFLGILGPAIGWVLYNILTPGLNQFNSMQEKNARG 132 Query: 418 KRAVPAAVGMGAAASLLFAQSAEAS 492 K+ +P +G+ AAA + A+A+ Sbjct: 133 KKGIPLGLGLSAAALAGMPEQADAA 157 [4][TOP] >UniRef100_A9U315 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U315_PHYPA Length = 137 Score = 62.0 bits (149), Expect = 2e-08 Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%) Frame = +1 Query: 211 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 390 V V T ++ A+ + +A A+ ++ +LA DNR L L+P +GWV FNI LQ Sbjct: 2 VNLVCTTGAMFAAMATSESAMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNI---LQP 58 Query: 391 QLNQMD-AKNKRAVPAAVGMGAAASLLFAQSAEAS 492 LNQ+D + +A+ A G+GAAA+L+ A A+A+ Sbjct: 59 ALNQVDKMRGAKALVAGAGLGAAATLMAAPHADAA 93 [5][TOP] >UniRef100_C1E7Y4 Photosystem II PsbY protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E7Y4_9CHLO Length = 191 Score = 60.5 bits (145), Expect = 6e-08 Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 2/88 (2%) Frame = +1 Query: 235 SVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQM--D 408 S AA M A AATE LA D R I VPVLGWVG+NI G QL +M D Sbjct: 56 SAAALMGMPEAADAATEAMQLADLDARIAIFGAF-VPVLGWVGYNILGPGLKQLEKMQQD 114 Query: 409 AKNKRAVPAAVGMGAAASLLFAQSAEAS 492 A K+ V A VG+ AAA + ++A+A+ Sbjct: 115 AAKKKGVAAGVGLSAAALMGMPEAADAA 142 [6][TOP] >UniRef100_Q00Y99 Manganese-binding protein PsbY, photosystem II-associated-s (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y99_OSTTA Length = 265 Score = 60.1 bits (144), Expect = 8e-08 Identities = 50/143 (34%), Positives = 65/143 (45%), Gaps = 2/143 (1%) Frame = +1 Query: 70 PALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAAS 249 PALR S A R R AK R A+ S V A+ E S+AA+ Sbjct: 8 PALRASRAAPLAKRE--RRAK-----RTAIASKVATKVATIESDEIVTRGQTAAMSLAAT 60 Query: 250 WMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN--KR 423 + A A AA E+ LA D R I + PVLGWV +NI G Q M KN + Sbjct: 61 MLFADQAHAAQEVGDLAGIDGRIAIFF-VFAPVLGWVAYNILGPGLRQFEDMQKKNAKSK 119 Query: 424 AVPAAVGMGAAASLLFAQSAEAS 492 V A G+ AAA L ++++A+ Sbjct: 120 GVLAGAGLSAAALLGMPEASDAA 142 [7][TOP] >UniRef100_A9SPH7 PsbY photosystem II polypeptide n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPH7_PHYPA Length = 368 Score = 57.8 bits (138), Expect = 4e-07 Identities = 41/106 (38%), Positives = 54/106 (50%), Gaps = 12/106 (11%) Frame = +1 Query: 208 KVGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQ 387 K G + L AS +A +A AA E+A+LA SD+R I+ LL+P +GWV FNI Sbjct: 205 KRGVIGALGLGTASLFLAPHADAAQEIATLADSDSRGLIIIGLLLPAVGWVLFNILKPAL 264 Query: 388 AQLNQMDAKNKRAVP-----------AAVGMGAAA-SLLFAQSAEA 489 Q+N + N P A G+ AAA SLL A A+A Sbjct: 265 NQINNIVEGNDTGAPVKRGKKFGGMIGATGISAAAMSLLAAPKADA 310 [8][TOP] >UniRef100_B6SUJ7 Photosystem II core complex proteins psbY n=1 Tax=Zea mays RepID=B6SUJ7_MAIZE Length = 196 Score = 55.8 bits (133), Expect = 1e-06 Identities = 47/136 (34%), Positives = 69/136 (50%) Frame = +1 Query: 85 SAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWMMAG 264 SAP S + S+R +P R + V A S G +A+ + A+ +A Sbjct: 19 SAPPSTSGSVSLR-----VPAR--AKKAAVSASVSSALAGAFFSALASSDAALAAQRVAD 71 Query: 265 NAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVPAAVG 444 A AA A SDNR +L ++ P +GWV +NI LQ LNQ++ +AV A +G Sbjct: 72 VAAAAD-----AGSDNRGQLLLFVVAPAIGWVLYNI---LQPALNQLNRMRSQAVVAGLG 123 Query: 445 MGAAASLLFAQSAEAS 492 +GAAA+ + A + EAS Sbjct: 124 LGAAAAGM-AAAPEAS 138 [9][TOP] >UniRef100_A4S5C8 Possible psbY, PSII-Y, photosystem II polypeptide n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S5C8_OSTLU Length = 416 Score = 54.7 bits (130), Expect = 3e-06 Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 5/136 (3%) Frame = +1 Query: 76 LRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWM 255 + + A A R + R+A+ + RA S VV + + + + G A +++ AAS Sbjct: 9 ITLPARAPARARRTARTAQSARVIARARTSAVVEDEFATDDDVVRRGQTAAMAT-AASMF 67 Query: 256 MAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN-----K 420 A A AA EL A D R I + PVLGWV +NI QL M A N K Sbjct: 68 FADRADAAQELMQTAL-DGRPLIFLAVFGPVLGWVAYNILSPGLRQLENMQAVNAKSSKK 126 Query: 421 RAVPAAVGMGAAASLL 468 RA A G A++L+ Sbjct: 127 RAAGALAGGLTASALM 142 [10][TOP] >UniRef100_B6SQV2 Photosystem II core complex proteins psbY n=1 Tax=Zea mays RepID=B6SQV2_MAIZE Length = 191 Score = 53.5 bits (127), Expect = 7e-06 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 2/135 (1%) Frame = +1 Query: 94 TSAALRSSVRSAKPVLPVRRAVR-SVVVRAQASEEQLGFKVGTVATLSSV-AASWMMAGN 267 T A L+ + ++A P + S+ VR + ++ V +TL+ A+ + + Sbjct: 6 TMALLKPAAKAAARSAPSTSSGSVSLRVRTGQAAKKAALSVSASSTLAGAFLAALASSPD 65 Query: 268 AQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVPAAVGM 447 A A A+ A D+R +L ++ P +GWV +NI QLN+M ++ +AV A +G+ Sbjct: 66 AALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRM--RSSQAVAAGLGL 123 Query: 448 GAAASLLFAQSAEAS 492 GAAA+ A EAS Sbjct: 124 GAAAAAGMAAPPEAS 138