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[1][TOP]
>UniRef100_A8I003 Ycf32-related subunit of photosystem II n=1 Tax=Chlamydomonas
reinhardtii RepID=A8I003_CHLRE
Length = 260
Score = 259 bits (663), Expect = 5e-68
Identities = 140/140 (100%), Positives = 140/140 (100%)
Frame = +1
Query: 73 ALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASW 252
ALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASW
Sbjct: 3 ALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASW 62
Query: 253 MMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVP 432
MMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVP
Sbjct: 63 MMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVP 122
Query: 433 AAVGMGAAASLLFAQSAEAS 492
AAVGMGAAASLLFAQSAEAS
Sbjct: 123 AAVGMGAAASLLFAQSAEAS 142
Score = 139 bits (350), Expect = 1e-31
Identities = 72/84 (85%), Positives = 79/84 (94%)
Frame = +1
Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 420
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 130 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVMGWVGFNIFGSLQAQLNQMDAKNK 189
Query: 421 RAVPAAVGMGAAASLLFAQSAEAS 492
RAVPAAVGMGAAASLLFAQSAEAS
Sbjct: 190 RAVPAAVGMGAAASLLFAQSAEAS 213
Score = 95.5 bits (236), Expect = 2e-18
Identities = 47/60 (78%), Positives = 55/60 (91%)
Frame = +1
Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 420
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL+QMDAKNK
Sbjct: 201 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLSQMDAKNK 260
[2][TOP]
>UniRef100_A8JKA1 Ycf32-related polyprotein of photosystem II (Fragment) n=1
Tax=Chlamydomonas reinhardtii RepID=A8JKA1_CHLRE
Length = 354
Score = 178 bits (451), Expect = 2e-43
Identities = 94/94 (100%), Positives = 94/94 (100%)
Frame = +1
Query: 211 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 390
VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA
Sbjct: 1 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 60
Query: 391 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEAS 492
QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEAS
Sbjct: 61 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEAS 94
Score = 139 bits (350), Expect = 1e-31
Identities = 72/84 (85%), Positives = 79/84 (94%)
Frame = +1
Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 420
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 82 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 141
Query: 421 RAVPAAVGMGAAASLLFAQSAEAS 492
RAVPAAVGMGAAASLLFAQSAEAS
Sbjct: 142 RAVPAAVGMGAAASLLFAQSAEAS 165
Score = 139 bits (350), Expect = 1e-31
Identities = 72/84 (85%), Positives = 79/84 (94%)
Frame = +1
Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 420
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 153 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 212
Query: 421 RAVPAAVGMGAAASLLFAQSAEAS 492
RAVPAAVGMGAAASLLFAQSAEAS
Sbjct: 213 RAVPAAVGMGAAASLLFAQSAEAS 236
Score = 139 bits (350), Expect = 1e-31
Identities = 72/84 (85%), Positives = 79/84 (94%)
Frame = +1
Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 420
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 224 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 283
Query: 421 RAVPAAVGMGAAASLLFAQSAEAS 492
RAVPAAVGMGAAASLLFAQSAEAS
Sbjct: 284 RAVPAAVGMGAAASLLFAQSAEAS 307
Score = 95.1 bits (235), Expect = 2e-18
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +1
Query: 241 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 420
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL QMDAKNK
Sbjct: 295 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLRQMDAKNK 354
[3][TOP]
>UniRef100_C1MZ88 Photosystem II PsbY protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MZ88_9CHLO
Length = 279
Score = 62.8 bits (151), Expect = 1e-08
Identities = 48/145 (33%), Positives = 70/145 (48%), Gaps = 8/145 (5%)
Frame = +1
Query: 82 MSAPTSAALRSSVRSAKPV----LPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAAS 249
+SA S + S R + V LPVR A V A A + ++G A L+ A
Sbjct: 13 VSARVSVRAKVSTRGLRAVGVKPLPVRPAAVRVSASAAAESQTDDLQLGQTAALTLAGAL 72
Query: 250 WMMAGNAQAATE-LASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN--- 417
+ A AA+E L+ +A D+RA I +L P +GWV +NI Q N M KN
Sbjct: 73 ALGTEQASAASESLSQVAGFDSRALIFLGILGPAIGWVLYNILTPGLNQFNSMQEKNARG 132
Query: 418 KRAVPAAVGMGAAASLLFAQSAEAS 492
K+ +P +G+ AAA + A+A+
Sbjct: 133 KKGIPLGLGLSAAALAGMPEQADAA 157
[4][TOP]
>UniRef100_A9U315 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U315_PHYPA
Length = 137
Score = 62.0 bits (149), Expect = 2e-08
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = +1
Query: 211 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 390
V V T ++ A+ + +A A+ ++ +LA DNR L L+P +GWV FNI LQ
Sbjct: 2 VNLVCTTGAMFAAMATSESAMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNI---LQP 58
Query: 391 QLNQMD-AKNKRAVPAAVGMGAAASLLFAQSAEAS 492
LNQ+D + +A+ A G+GAAA+L+ A A+A+
Sbjct: 59 ALNQVDKMRGAKALVAGAGLGAAATLMAAPHADAA 93
[5][TOP]
>UniRef100_C1E7Y4 Photosystem II PsbY protein n=1 Tax=Micromonas sp. RCC299
RepID=C1E7Y4_9CHLO
Length = 191
Score = 60.5 bits (145), Expect = 6e-08
Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Frame = +1
Query: 235 SVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQM--D 408
S AA M A AATE LA D R I VPVLGWVG+NI G QL +M D
Sbjct: 56 SAAALMGMPEAADAATEAMQLADLDARIAIFGAF-VPVLGWVGYNILGPGLKQLEKMQQD 114
Query: 409 AKNKRAVPAAVGMGAAASLLFAQSAEAS 492
A K+ V A VG+ AAA + ++A+A+
Sbjct: 115 AAKKKGVAAGVGLSAAALMGMPEAADAA 142
[6][TOP]
>UniRef100_Q00Y99 Manganese-binding protein PsbY, photosystem II-associated-s (ISS)
n=1 Tax=Ostreococcus tauri RepID=Q00Y99_OSTTA
Length = 265
Score = 60.1 bits (144), Expect = 8e-08
Identities = 50/143 (34%), Positives = 65/143 (45%), Gaps = 2/143 (1%)
Frame = +1
Query: 70 PALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAAS 249
PALR S A R R AK R A+ S V A+ E S+AA+
Sbjct: 8 PALRASRAAPLAKRE--RRAK-----RTAIASKVATKVATIESDEIVTRGQTAAMSLAAT 60
Query: 250 WMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN--KR 423
+ A A AA E+ LA D R I + PVLGWV +NI G Q M KN +
Sbjct: 61 MLFADQAHAAQEVGDLAGIDGRIAIFF-VFAPVLGWVAYNILGPGLRQFEDMQKKNAKSK 119
Query: 424 AVPAAVGMGAAASLLFAQSAEAS 492
V A G+ AAA L ++++A+
Sbjct: 120 GVLAGAGLSAAALLGMPEASDAA 142
[7][TOP]
>UniRef100_A9SPH7 PsbY photosystem II polypeptide n=1 Tax=Physcomitrella patens
subsp. patens RepID=A9SPH7_PHYPA
Length = 368
Score = 57.8 bits (138), Expect = 4e-07
Identities = 41/106 (38%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Frame = +1
Query: 208 KVGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQ 387
K G + L AS +A +A AA E+A+LA SD+R I+ LL+P +GWV FNI
Sbjct: 205 KRGVIGALGLGTASLFLAPHADAAQEIATLADSDSRGLIIIGLLLPAVGWVLFNILKPAL 264
Query: 388 AQLNQMDAKNKRAVP-----------AAVGMGAAA-SLLFAQSAEA 489
Q+N + N P A G+ AAA SLL A A+A
Sbjct: 265 NQINNIVEGNDTGAPVKRGKKFGGMIGATGISAAAMSLLAAPKADA 310
[8][TOP]
>UniRef100_B6SUJ7 Photosystem II core complex proteins psbY n=1 Tax=Zea mays
RepID=B6SUJ7_MAIZE
Length = 196
Score = 55.8 bits (133), Expect = 1e-06
Identities = 47/136 (34%), Positives = 69/136 (50%)
Frame = +1
Query: 85 SAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWMMAG 264
SAP S + S+R +P R + V A S G +A+ + A+ +A
Sbjct: 19 SAPPSTSGSVSLR-----VPAR--AKKAAVSASVSSALAGAFFSALASSDAALAAQRVAD 71
Query: 265 NAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVPAAVG 444
A AA A SDNR +L ++ P +GWV +NI LQ LNQ++ +AV A +G
Sbjct: 72 VAAAAD-----AGSDNRGQLLLFVVAPAIGWVLYNI---LQPALNQLNRMRSQAVVAGLG 123
Query: 445 MGAAASLLFAQSAEAS 492
+GAAA+ + A + EAS
Sbjct: 124 LGAAAAGM-AAAPEAS 138
[9][TOP]
>UniRef100_A4S5C8 Possible psbY, PSII-Y, photosystem II polypeptide n=1
Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S5C8_OSTLU
Length = 416
Score = 54.7 bits (130), Expect = 3e-06
Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Frame = +1
Query: 76 LRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWM 255
+ + A A R + R+A+ + RA S VV + + + + G A +++ AAS
Sbjct: 9 ITLPARAPARARRTARTAQSARVIARARTSAVVEDEFATDDDVVRRGQTAAMAT-AASMF 67
Query: 256 MAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN-----K 420
A A AA EL A D R I + PVLGWV +NI QL M A N K
Sbjct: 68 FADRADAAQELMQTAL-DGRPLIFLAVFGPVLGWVAYNILSPGLRQLENMQAVNAKSSKK 126
Query: 421 RAVPAAVGMGAAASLL 468
RA A G A++L+
Sbjct: 127 RAAGALAGGLTASALM 142
[10][TOP]
>UniRef100_B6SQV2 Photosystem II core complex proteins psbY n=1 Tax=Zea mays
RepID=B6SQV2_MAIZE
Length = 191
Score = 53.5 bits (127), Expect = 7e-06
Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 2/135 (1%)
Frame = +1
Query: 94 TSAALRSSVRSAKPVLPVRRAVR-SVVVRAQASEEQLGFKVGTVATLSSV-AASWMMAGN 267
T A L+ + ++A P + S+ VR + ++ V +TL+ A+ + +
Sbjct: 6 TMALLKPAAKAAARSAPSTSSGSVSLRVRTGQAAKKAALSVSASSTLAGAFLAALASSPD 65
Query: 268 AQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRAVPAAVGM 447
A A A+ A D+R +L ++ P +GWV +NI QLN+M ++ +AV A +G+
Sbjct: 66 AALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRM--RSSQAVAAGLGL 123
Query: 448 GAAASLLFAQSAEAS 492
GAAA+ A EAS
Sbjct: 124 GAAAAAGMAAPPEAS 138