[UP]
[1][TOP]
>UniRef100_A8HMG1 Peptide deformylase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8HMG1_CHLRE
Length = 248
Score = 207 bits (528), Expect = 2e-52
Identities = 106/106 (100%), Positives = 106/106 (100%)
Frame = +1
Query: 91 MLLRPTLRSAVLLPFRGRQRAVGVQAQAAKSGKGFGTTAKLQEVPVVTKLEWTSPLQIIK 270
MLLRPTLRSAVLLPFRGRQRAVGVQAQAAKSGKGFGTTAKLQEVPVVTKLEWTSPLQIIK
Sbjct: 1 MLLRPTLRSAVLLPFRGRQRAVGVQAQAAKSGKGFGTTAKLQEVPVVTKLEWTSPLQIIK 60
Query: 271 YPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
YPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV
Sbjct: 61 YPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 106
[2][TOP]
>UniRef100_C5XEI7 Putative uncharacterized protein Sb03g029040 n=1 Tax=Sorghum
bicolor RepID=C5XEI7_SORBI
Length = 264
Score = 84.3 bits (207), Expect = 4e-15
Identities = 49/108 (45%), Positives = 68/108 (62%), Gaps = 5/108 (4%)
Frame = +1
Query: 100 RPTLRS---AVLLPFRGRQRAVGVQAQAAKSGKGFGTTAK--LQEVPVVTKLEWTSPLQI 264
RP L + A+ LP R A+ + A+A + G G T A ++ T L + SPL++
Sbjct: 17 RPLLAARSGALPLPLRRAGPAMPLVARARR-GLGSSTAADPLAEDFATATDLRFESPLEV 75
Query: 265 IKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
+KYPDP LRA N +IN FD +L LA EM ++MY+ DG+GL+APQVGV
Sbjct: 76 VKYPDPILRARNKRINAFDANLRALADEMFDVMYKTDGIGLSAPQVGV 123
[3][TOP]
>UniRef100_A9NUU5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NUU5_PICSI
Length = 290
Score = 83.2 bits (204), Expect = 8e-15
Identities = 44/87 (50%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Frame = +1
Query: 154 VGVQAQAAKSGKGFGTTAKL--QEVPVVTKLEWTSPLQIIKYPDPRLRAVNAKINVFDES 327
+GV +QA + GF + + +E ++L++ PL+I+KYPD RLRA N IN+FDE
Sbjct: 76 MGVMSQARR---GFLSELRKMKEEEDFASELQYELPLKIVKYPDSRLRAKNKPINIFDEK 132
Query: 328 LMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L RLA EM ++MY+ DGVGL+APQVGV
Sbjct: 133 LQRLADEMFDLMYKTDGVGLSAPQVGV 159
[4][TOP]
>UniRef100_B9EY95 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9EY95_ORYSJ
Length = 267
Score = 80.5 bits (197), Expect = 5e-14
Identities = 38/85 (44%), Positives = 58/85 (68%), Gaps = 6/85 (7%)
Frame = +1
Query: 172 AAKSGKGFGTT------AKLQEVPVVTKLEWTSPLQIIKYPDPRLRAVNAKINVFDESLM 333
AA++ +GFG+ A+ ++ L++ PL+++KYPDP LRA N +IN FD++L
Sbjct: 44 AARARRGFGSAVATAPPAEDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLR 103
Query: 334 RLAKEMIEIMYQDDGVGLAAPQVGV 408
L EM ++MY+ DG+GL+APQVGV
Sbjct: 104 SLTDEMFDVMYKTDGIGLSAPQVGV 128
[5][TOP]
>UniRef100_Q5VNN5 Peptide deformylase 1B, chloroplastic n=1 Tax=Oryza sativa Japonica
Group RepID=DEF1B_ORYSJ
Length = 269
Score = 80.5 bits (197), Expect = 5e-14
Identities = 38/85 (44%), Positives = 58/85 (68%), Gaps = 6/85 (7%)
Frame = +1
Query: 172 AAKSGKGFGTT------AKLQEVPVVTKLEWTSPLQIIKYPDPRLRAVNAKINVFDESLM 333
AA++ +GFG+ A+ ++ L++ PL+++KYPDP LRA N +IN FD++L
Sbjct: 44 AARARRGFGSAVATAPPAEDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLR 103
Query: 334 RLAKEMIEIMYQDDGVGLAAPQVGV 408
L EM ++MY+ DG+GL+APQVGV
Sbjct: 104 SLTDEMFDVMYKTDGIGLSAPQVGV 128
[6][TOP]
>UniRef100_A9TMS8 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9TMS8_PHYPA
Length = 202
Score = 80.1 bits (196), Expect = 7e-14
Identities = 37/57 (64%), Positives = 46/57 (80%)
Frame = +1
Query: 238 LEWTSPLQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
LE+ SPL++I YPDPRLRA N I VFD+ L +L EM+++MY+ DGVGLAAPQVGV
Sbjct: 5 LEFDSPLEVILYPDPRLRAKNKFIKVFDDKLQQLVNEMLDVMYKTDGVGLAAPQVGV 61
[7][TOP]
>UniRef100_Q7XYP8 Peptide deformylase n=1 Tax=Bigelowiella natans RepID=Q7XYP8_BIGNA
Length = 315
Score = 78.2 bits (191), Expect = 3e-13
Identities = 34/57 (59%), Positives = 41/57 (71%)
Frame = +1
Query: 238 LEWTSPLQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
++W PL +IKYPDPRLR N KI F + L LA EM ++MY DDG GLAAPQVG+
Sbjct: 116 IQWKGPLNVIKYPDPRLRTENEKITEFGKPLQELADEMFDVMYDDDGCGLAAPQVGI 172
[8][TOP]
>UniRef100_B9GI48 Peptide deformylase (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9GI48_POPTR
Length = 258
Score = 78.2 bits (191), Expect = 3e-13
Identities = 38/89 (42%), Positives = 61/89 (68%)
Frame = +1
Query: 142 RQRAVGVQAQAAKSGKGFGTTAKLQEVPVVTKLEWTSPLQIIKYPDPRLRAVNAKINVFD 321
R ++ V++QA + G K +V + LE+ +PL+I++YPDP LRA N +I+ FD
Sbjct: 34 RPPSLFVRSQAKR-----GPFLKQDQVAATSDLEFEAPLKIVEYPDPILRAKNKRIDSFD 88
Query: 322 ESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
++L +L EM ++MY+ DG+GL+APQVG+
Sbjct: 89 DNLKKLVDEMFDVMYKTDGIGLSAPQVGI 117
[9][TOP]
>UniRef100_C7IXK1 Os01g0636600 protein (Fragment) n=1 Tax=Oryza sativa Japonica Group
RepID=C7IXK1_ORYSJ
Length = 198
Score = 77.4 bits (189), Expect = 5e-13
Identities = 44/102 (43%), Positives = 60/102 (58%)
Frame = +1
Query: 103 PTLRSAVLLPFRGRQRAVGVQAQAAKSGKGFGTTAKLQEVPVVTKLEWTSPLQIIKYPDP 282
P R+ + P R + V A A+ + F T A LQ P PL+++KYPDP
Sbjct: 41 PLSRTGSVAPLRHGFGSAVVTAPPAED-EDFATAADLQFEP---------PLKVVKYPDP 90
Query: 283 RLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
LRA N +IN FD++L L EM ++MY+ DG+GL+APQVGV
Sbjct: 91 ILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGLSAPQVGV 132
[10][TOP]
>UniRef100_B8ACB8 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
RepID=B8ACB8_ORYSI
Length = 997
Score = 77.4 bits (189), Expect = 5e-13
Identities = 44/102 (43%), Positives = 60/102 (58%)
Frame = +1
Query: 103 PTLRSAVLLPFRGRQRAVGVQAQAAKSGKGFGTTAKLQEVPVVTKLEWTSPLQIIKYPDP 282
P R+ + P R + V A A+ + F T A LQ P PL+++KYPDP
Sbjct: 754 PLSRTGSVAPLRHGFGSAVVTAPPAED-EDFATAADLQFEP---------PLKVVKYPDP 803
Query: 283 RLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
LRA N +IN FD++L L EM ++MY+ DG+GL+APQVGV
Sbjct: 804 ILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGLSAPQVGV 845
[11][TOP]
>UniRef100_B9EY90 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9EY90_ORYSJ
Length = 260
Score = 76.6 bits (187), Expect = 8e-13
Identities = 44/102 (43%), Positives = 59/102 (57%)
Frame = +1
Query: 103 PTLRSAVLLPFRGRQRAVGVQAQAAKSGKGFGTTAKLQEVPVVTKLEWTSPLQIIKYPDP 282
P R + P R + V A A+ + F T A LQ P PL+++KYPDP
Sbjct: 17 PLSRRGSVAPLRHGFGSAVVTAPPAED-EDFATAADLQFEP---------PLKVVKYPDP 66
Query: 283 RLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
LRA N +IN FD++L L EM ++MY+ DG+GL+APQVGV
Sbjct: 67 ILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGLSAPQVGV 108
[12][TOP]
>UniRef100_B9S632 Polypeptide deformylase, putative n=1 Tax=Ricinus communis
RepID=B9S632_RICCO
Length = 282
Score = 74.3 bits (181), Expect = 4e-12
Identities = 36/86 (41%), Positives = 58/86 (67%)
Frame = +1
Query: 151 AVGVQAQAAKSGKGFGTTAKLQEVPVVTKLEWTSPLQIIKYPDPRLRAVNAKINVFDESL 330
++ V+AQA +S + K +E+ L + PL+I++YPDP LR N +I+ FD++L
Sbjct: 60 SIPVRAQAKRS-----FSFKEEEIATPADLCFEEPLKIVEYPDPILRRKNKRIDTFDDNL 114
Query: 331 MRLAKEMIEIMYQDDGVGLAAPQVGV 408
+L EM ++MY+ DG+GL+APQVG+
Sbjct: 115 KKLVDEMFDVMYKTDGIGLSAPQVGI 140
[13][TOP]
>UniRef100_C6T1P9 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T1P9_SOYBN
Length = 221
Score = 73.6 bits (179), Expect = 7e-12
Identities = 31/56 (55%), Positives = 45/56 (80%)
Frame = +1
Query: 241 EWTSPLQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
E+ PL+I++YPDPRLRA N +I FD+SL +L EM ++MY+ DG+GL+APQ+G+
Sbjct: 70 EFVLPLKIVEYPDPRLRARNKRIVAFDDSLKKLVHEMFDVMYKTDGIGLSAPQLGI 125
[14][TOP]
>UniRef100_A7PM79 Chromosome chr14 scaffold_21, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PM79_VITVI
Length = 275
Score = 73.6 bits (179), Expect = 7e-12
Identities = 38/91 (41%), Positives = 58/91 (63%)
Frame = +1
Query: 136 RGRQRAVGVQAQAAKSGKGFGTTAKLQEVPVVTKLEWTSPLQIIKYPDPRLRAVNAKINV 315
R R + VQ QA + G + K + + L + +PL+I++YPDP LRA N I+
Sbjct: 48 RFRLPLMQVQVQAKR-----GFSFKEEVIASPADLSFEAPLKIVEYPDPILRAKNKLIST 102
Query: 316 FDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
FD++L +L EM ++MY+ DG+GL+APQVG+
Sbjct: 103 FDDNLKKLVDEMFDVMYKTDGIGLSAPQVGI 133
[15][TOP]
>UniRef100_Q9FUZ2 Peptide deformylase 1B, chloroplastic n=1 Tax=Arabidopsis thaliana
RepID=DEF1B_ARATH
Length = 273
Score = 73.6 bits (179), Expect = 7e-12
Identities = 32/67 (47%), Positives = 50/67 (74%)
Frame = +1
Query: 208 KLQEVPVVTKLEWTSPLQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGL 387
K +V T +++ +PL+I++YPDP LRA N +I++FDE+L L M ++MY+ DG+GL
Sbjct: 65 KDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGL 124
Query: 388 AAPQVGV 408
+APQVG+
Sbjct: 125 SAPQVGL 131
[16][TOP]
>UniRef100_Q9FV54 Peptide deformylase 1B, chloroplastic n=1 Tax=Solanum lycopersicum
RepID=DEF1B_SOLLC
Length = 279
Score = 73.2 bits (178), Expect = 9e-12
Identities = 39/86 (45%), Positives = 54/86 (62%)
Frame = +1
Query: 151 AVGVQAQAAKSGKGFGTTAKLQEVPVVTKLEWTSPLQIIKYPDPRLRAVNAKINVFDESL 330
AV QA+ S K G E+ L + PL+I++YPDP LRA N +I+ FD +L
Sbjct: 57 AVYAQARRVLSSKTKG-----DEIATPADLSFVVPLKIVEYPDPILRAKNKRIDNFDANL 111
Query: 331 MRLAKEMIEIMYQDDGVGLAAPQVGV 408
+L EM +IMY+ DG+GL+APQVG+
Sbjct: 112 KKLVDEMFDIMYKTDGIGLSAPQVGM 137
[17][TOP]
>UniRef100_A4RVA1 Peptide deformylase, organellar n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4RVA1_OSTLU
Length = 240
Score = 71.2 bits (173), Expect = 3e-11
Identities = 42/96 (43%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Frame = +1
Query: 145 QRAVGVQAQAAKSGKGFGTTAKLQEVPVVTK--------LEWTSPLQIIKYPDPRLRAVN 300
+R V A+ K G FG L TK + W+ PL I KYP LRA N
Sbjct: 21 RRGAAVVARGKKKGFLFGEVENLSREGEGTKGDDEDAKSVRWSEPLAIAKYPAKCLRAKN 80
Query: 301 AKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
A + FD++L RL+K M +IMY+ G GLAAPQVGV
Sbjct: 81 APVETFDKNLERLSKAMFKIMYETVGCGLAAPQVGV 116
[18][TOP]
>UniRef100_C1FF41 Peptide deformylase, chloroplast n=1 Tax=Micromonas sp. RCC299
RepID=C1FF41_9CHLO
Length = 257
Score = 69.3 bits (168), Expect = 1e-10
Identities = 41/84 (48%), Positives = 53/84 (63%), Gaps = 3/84 (3%)
Frame = +1
Query: 166 AQAAKSGKGFGTTAKLQEVPVV---TKLEWTSPLQIIKYPDPRLRAVNAKINVFDESLMR 336
AQ A++ KG G A+++E K+E+T PL I KYP LR N + VFD L +
Sbjct: 52 AQIARAKKG-GFMAEMEEAKAEESGAKVEFTLPLAIQKYPHASLRNDNKIVGVFDSDLEK 110
Query: 337 LAKEMIEIMYQDDGVGLAAPQVGV 408
LA+ M +IMY +GVGLAAPQVGV
Sbjct: 111 LAQAMFKIMYDTEGVGLAAPQVGV 134
[19][TOP]
>UniRef100_Q01BT3 Peptide deformylase (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q01BT3_OSTTA
Length = 175
Score = 68.9 bits (167), Expect = 2e-10
Identities = 42/107 (39%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Frame = +1
Query: 103 PTLRSAVLLPFRGRQRAVGVQAQAAKSGKGFGTTAKLQE-----VPVVTKLEWTSPLQII 267
P + A GR+ + AK G FG ++ + W+ PL I
Sbjct: 13 PRVHRARSFGAHGRRASARATRTEAKKGFLFGELEDMKRGESGGASSSESVAWSEPLAIA 72
Query: 268 KYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
KYP P LRA NA I FD +L +L+K M +IMY+ G GLAAPQVGV
Sbjct: 73 KYPAPCLRAKNAPIETFDANLEQLSKAMFKIMYETVGCGLAAPQVGV 119
[20][TOP]
>UniRef100_C1MGI0 Peptide deformylase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MGI0_9CHLO
Length = 210
Score = 66.6 bits (161), Expect = 8e-10
Identities = 38/80 (47%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Frame = +1
Query: 184 GKGFGTTAKLQEVP-----VVTKLEWTSPLQIIKYPDPRLRAVNAKINVFDESLMRLAKE 348
GK G ++L E+ +E+ PL+I KYP +LR N KI VFD L +LA
Sbjct: 8 GKKGGFLSELSEIAEENDATGAAVEFALPLEIQKYPSAKLRDENKKIGVFDAELKKLADA 67
Query: 349 MIEIMYQDDGVGLAAPQVGV 408
M MY+ DGVGLAAPQVGV
Sbjct: 68 MFAKMYESDGVGLAAPQVGV 87
[21][TOP]
>UniRef100_Q2IA88 Chloroplast peptide deformylase (Fragment) n=1 Tax=Isochrysis
galbana RepID=Q2IA88_ISOGA
Length = 200
Score = 61.6 bits (148), Expect = 3e-08
Identities = 28/51 (54%), Positives = 39/51 (76%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L+I++YP P LRA N+++ FD+SL +L +EM IMY GVGLAAPQ+G+
Sbjct: 84 LRILEYPHPLLRAPNSEVVSFDDSLRKLTREMFAIMYASRGVGLAAPQLGI 134
[22][TOP]
>UniRef100_C6T5G3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T5G3_SOYBN
Length = 125
Score = 59.7 bits (143), Expect = 1e-07
Identities = 25/47 (53%), Positives = 36/47 (76%)
Frame = +1
Query: 241 EWTSPLQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGV 381
E+ PL+I++YPDPRLRA N +I FD+SL +L EM ++MY+ DG+
Sbjct: 70 EFAQPLKIVEYPDPRLRARNKRIVAFDDSLKKLVHEMFDVMYKADGI 116
[23][TOP]
>UniRef100_C7RIT0 Peptide deformylase n=1 Tax=Candidatus Accumulibacter phosphatis
clade IIA str. UW-1 RepID=C7RIT0_9PROT
Length = 167
Score = 58.9 bits (141), Expect = 2e-07
Identities = 27/53 (50%), Positives = 39/53 (73%)
Frame = +1
Query: 250 SPLQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
S L I+++PDPRLR V A+++ D+ + RLA++M E MY+ G+GLAA QV V
Sbjct: 2 SLLPILRFPDPRLRKVAARVDKIDDGIRRLARDMAETMYEAPGIGLAATQVDV 54
[24][TOP]
>UniRef100_B6BVG3 Peptide deformylase n=1 Tax=beta proteobacterium KB13
RepID=B6BVG3_9PROT
Length = 166
Score = 58.9 bits (141), Expect = 2e-07
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L+I+KYPDPRL + + VFDES +L ++M E MY+ G+GLAA QV V
Sbjct: 4 LKILKYPDPRLHKIAEIVEVFDESTEKLVQDMAETMYESKGIGLAATQVDV 54
[25][TOP]
>UniRef100_Q6AQ98 Peptide deformylase n=1 Tax=Desulfotalea psychrophila
RepID=DEF_DESPS
Length = 169
Score = 58.5 bits (140), Expect = 2e-07
Identities = 27/50 (54%), Positives = 34/50 (68%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVG 405
L+I YPDP LR I VFDE L++L ++M E MY G+GLAAPQ+G
Sbjct: 4 LKICTYPDPVLRKETVAITVFDEKLVKLTEDMAETMYDAPGIGLAAPQIG 53
[26][TOP]
>UniRef100_Q0A5B9 Peptide deformylase n=1 Tax=Alkalilimnicola ehrlichii MLHE-1
RepID=DEF_ALHEH
Length = 178
Score = 58.5 bits (140), Expect = 2e-07
Identities = 28/51 (54%), Positives = 35/51 (68%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I+ YPDPRLR V A + D+ + RLA +M+E MY G+GLAA QVGV
Sbjct: 4 LDILVYPDPRLREVAAPVAQVDDDIRRLADDMLETMYDAQGIGLAATQVGV 54
[27][TOP]
>UniRef100_Q8I372 Formylmethionine deformylase, putative n=1 Tax=Plasmodium
falciparum 3D7 RepID=Q8I372_PLAF7
Length = 241
Score = 58.2 bits (139), Expect = 3e-07
Identities = 23/51 (45%), Positives = 39/51 (76%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
++I+KYPDP LR + ++ FD++L R+ ++M +IMY+ G+GL+APQV +
Sbjct: 65 IKIVKYPDPILRRRSEEVTNFDDNLKRVVRKMFDIMYESKGIGLSAPQVNI 115
[28][TOP]
>UniRef100_C9M9L5 Peptide deformylase n=1 Tax=Jonquetella anthropi E3_33 E1
RepID=C9M9L5_9BACT
Length = 162
Score = 57.8 bits (138), Expect = 4e-07
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +1
Query: 271 YPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
YPDP LR + VFDE+L RL ++M IM++ DGVGLAAPQ+G+
Sbjct: 10 YPDPVLRQPTEPVTVFDEALRRLLEDMAVIMHEADGVGLAAPQIGI 55
[29][TOP]
>UniRef100_Q6MJL6 Peptide deformylase n=1 Tax=Bdellovibrio bacteriovorus
RepID=Q6MJL6_BDEBA
Length = 201
Score = 57.4 bits (137), Expect = 5e-07
Identities = 23/50 (46%), Positives = 37/50 (74%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVG 405
++I+ +PDP+LR V+ + F + +LA++M+E MY +G+GLAAPQVG
Sbjct: 3 MKILTFPDPKLREVSQPVKTFGPEIAKLAEDMVETMYHANGIGLAAPQVG 52
[30][TOP]
>UniRef100_A6GKY9 Peptide deformylase n=1 Tax=Limnobacter sp. MED105
RepID=A6GKY9_9BURK
Length = 169
Score = 57.4 bits (137), Expect = 5e-07
Identities = 26/51 (50%), Positives = 36/51 (70%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I++YPDPRL+ V + FD++L++L ++M E MY GVGLAA QV V
Sbjct: 4 LPILRYPDPRLKTVATPVTQFDDALVKLTQDMAETMYDAPGVGLAATQVNV 54
[31][TOP]
>UniRef100_C8WBD7 Peptide deformylase n=1 Tax=Zymomonas mobilis subsp. mobilis NCIMB
11163 RepID=C8WBD7_ZYMMO
Length = 177
Score = 57.0 bits (136), Expect = 6e-07
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I++ PDPRLR + + VFD++L RL +M E MY+ G+GLAA QVGV
Sbjct: 4 LPILEVPDPRLREKSTVVEVFDDNLQRLIDDMFETMYKAPGIGLAAIQVGV 54
[32][TOP]
>UniRef100_Q9REQ2 Peptide deformylase n=2 Tax=Zymomonas mobilis RepID=DEF_ZYMMO
Length = 177
Score = 57.0 bits (136), Expect = 6e-07
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I++ PDPRLR + + VFD++L RL +M E MY+ G+GLAA QVGV
Sbjct: 4 LPILEVPDPRLREKSTVVEVFDDNLQRLIDDMFETMYKAPGIGLAAIQVGV 54
[33][TOP]
>UniRef100_A3V1A0 Peptide deformylase n=1 Tax=Loktanella vestfoldensis SKA53
RepID=A3V1A0_9RHOB
Length = 173
Score = 56.6 bits (135), Expect = 8e-07
Identities = 26/49 (53%), Positives = 35/49 (71%)
Frame = +1
Query: 262 IIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
I+ +PDPRL+ V A + D+ L RLA +M+E MY+ G+GLAAPQV V
Sbjct: 6 ILIHPDPRLKKVTAPVASIDDDLRRLADDMLETMYEAPGIGLAAPQVAV 54
[34][TOP]
>UniRef100_Q2SQX1 Peptide deformylase n=1 Tax=Hahella chejuensis KCTC 2396
RepID=DEF_HAHCH
Length = 168
Score = 56.6 bits (135), Expect = 8e-07
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +1
Query: 250 SPLQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
S LQI+++PDPRLR V + FD +L +L +M E MY+ G+GLAA QV V
Sbjct: 2 SKLQILEFPDPRLRTVAKPVQTFDAALGQLIDDMFETMYEAPGIGLAATQVDV 54
[35][TOP]
>UniRef100_C6D4F7 Peptide deformylase n=1 Tax=Paenibacillus sp. JDR-2
RepID=C6D4F7_PAESJ
Length = 161
Score = 56.2 bits (134), Expect = 1e-06
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +1
Query: 262 IIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
I+K PDP LR ++ F+ +L +L K+M E MY DGVGLAAPQ+G+
Sbjct: 6 IVKEPDPVLRETAKEVTKFNSNLQKLLKDMAETMYDADGVGLAAPQIGI 54
[36][TOP]
>UniRef100_A6SU86 Peptide deformylase n=1 Tax=Janthinobacterium sp. Marseille
RepID=A6SU86_JANMA
Length = 178
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = +1
Query: 250 SPLQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
S L I++YPDPRL V ++VFDE + L +M E MY GVGLAA QV V
Sbjct: 2 SILNILRYPDPRLHKVAKPVSVFDERIKTLVADMAETMYDAPGVGLAASQVDV 54
[37][TOP]
>UniRef100_Q1ZJ42 Peptide deformylase n=1 Tax=Psychromonas sp. CNPT3
RepID=Q1ZJ42_9GAMM
Length = 170
Score = 55.8 bits (133), Expect = 1e-06
Identities = 24/51 (47%), Positives = 38/51 (74%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L ++ +PDPRLR V K++ F L+ +A++MI+ MY+++GVGLAA QV +
Sbjct: 4 LDVLHFPDPRLRTVAKKVSNFTPELIDIAQDMIDTMYEENGVGLAATQVDI 54
[38][TOP]
>UniRef100_Q5VNP3 Peptide deformylase-like n=1 Tax=Oryza sativa Japonica Group
RepID=Q5VNP3_ORYSJ
Length = 326
Score = 55.8 bits (133), Expect = 1e-06
Identities = 32/95 (33%), Positives = 45/95 (47%), Gaps = 38/95 (40%)
Frame = +1
Query: 238 LEWTSPLQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIM------------------ 363
L++ PL+++KYPDP LRA N +IN FD++L L EM ++M
Sbjct: 91 LQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYNASDSICVTLLNKQIKK 150
Query: 364 --------------------YQDDGVGLAAPQVGV 408
Y+ DG+GL+APQVGV
Sbjct: 151 GLLSTIAREDIPPIEPLVSCYRTDGIGLSAPQVGV 185
[39][TOP]
>UniRef100_Q577L5 Peptide deformylase n=1 Tax=Brucella abortus RepID=Q577L5_BRUAB
Length = 164
Score = 55.5 bits (132), Expect = 2e-06
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +1
Query: 262 IIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
I+KYPDPRLRA + FDE L +LA ++++ M G+G+ AP VG+
Sbjct: 6 IVKYPDPRLRAAAEPVTTFDEGLRKLADDLLDTMRAAPGIGITAPHVGI 54
[40][TOP]
>UniRef100_UPI0001BA1162 peptide deformylase-like protein n=1 Tax=Brucella sp. F5/99
RepID=UPI0001BA1162
Length = 164
Score = 55.1 bits (131), Expect = 2e-06
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +1
Query: 262 IIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
I+KYPDPRLRA + FDE L +LA ++++ M G+G+ AP +G+
Sbjct: 6 IVKYPDPRLRAAAEPVTTFDEGLRKLADDLLDTMRAAPGIGITAPHIGI 54
[41][TOP]
>UniRef100_UPI0001B48815 peptide deformylase n=1 Tax=Brucella sp. 83/13 RepID=UPI0001B48815
Length = 164
Score = 55.1 bits (131), Expect = 2e-06
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +1
Query: 262 IIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
I+KYPDPRLRA + FDE L +LA ++++ M G+G+ AP +G+
Sbjct: 6 IVKYPDPRLRAAAEPVTTFDEDLRKLADDLLDTMRAAPGIGITAPHIGI 54
[42][TOP]
>UniRef100_C9UTH4 Polypeptide deformylase-like protein n=1 Tax=Brucella abortus bv. 3
str. Tulya RepID=C9UTH4_BRUAB
Length = 164
Score = 55.1 bits (131), Expect = 2e-06
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +1
Query: 262 IIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
I+KYPDPRLRA + FDE L +LA ++++ M G+G+ AP +G+
Sbjct: 6 IVKYPDPRLRAAAEPVTTFDEGLRKLADDLLDTMRAAPGIGITAPHIGI 54
[43][TOP]
>UniRef100_C9T0T9 Peptide deformylase-like protein n=2 Tax=Brucella ceti
RepID=C9T0T9_9RHIZ
Length = 164
Score = 55.1 bits (131), Expect = 2e-06
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +1
Query: 262 IIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
I+KYPDPRLRA + FDE L +LA ++++ M G+G+ AP +G+
Sbjct: 6 IVKYPDPRLRAAAEPVTTFDEGLRKLADDLLDTMRAAPGIGITAPHIGI 54
[44][TOP]
>UniRef100_C7N541 Peptide deformylase n=1 Tax=Slackia heliotrinireducens DSM 20476
RepID=C7N541_SLAHD
Length = 180
Score = 55.1 bits (131), Expect = 2e-06
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L ++ YPDP LR V + D+SL +LA++M MY ++G GLAAPQVGV
Sbjct: 6 LPVVTYPDPTLREVCVPCDPSDKSLKKLARQMANTMYANNGCGLAAPQVGV 56
[45][TOP]
>UniRef100_C4IW08 Peptide deformylase n=1 Tax=Brucella abortus str. 2308 A
RepID=C4IW08_BRUAB
Length = 214
Score = 55.1 bits (131), Expect = 2e-06
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +1
Query: 262 IIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
I+KYPDPRLRA + FDE L +LA ++++ M G+G+ AP +G+
Sbjct: 56 IVKYPDPRLRAAAEPVTTFDEGLRKLADDLLDTMRAAPGIGITAPHIGI 104
[46][TOP]
>UniRef100_C0GA23 Peptide deformylase n=1 Tax=Brucella ceti str. Cudo
RepID=C0GA23_9RHIZ
Length = 214
Score = 55.1 bits (131), Expect = 2e-06
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +1
Query: 262 IIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
I+KYPDPRLRA + FDE L +LA ++++ M G+G+ AP +G+
Sbjct: 56 IVKYPDPRLRAAAEPVTTFDEGLRKLADDLLDTMRAAPGIGITAPHIGI 104
[47][TOP]
>UniRef100_P63919 Peptide deformylase-like n=19 Tax=Brucella RepID=DEFL_BRUME
Length = 164
Score = 55.1 bits (131), Expect = 2e-06
Identities = 22/49 (44%), Positives = 33/49 (67%)
Frame = +1
Query: 262 IIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
I+KYPDPRLRA + FDE L +LA ++++ M G+G+ AP +G+
Sbjct: 6 IVKYPDPRLRAAAEPVTTFDEGLRKLADDLLDTMRAAPGIGITAPHIGI 54
[48][TOP]
>UniRef100_Q1I2G5 Peptide deformylase n=1 Tax=Pseudomonas entomophila L48
RepID=Q1I2G5_PSEE4
Length = 168
Score = 54.7 bits (130), Expect = 3e-06
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I+++PDPRLR + + FD++L +L +M E MY+ G+GLAA QV V
Sbjct: 4 LNILEFPDPRLRTIAKPVTEFDDALRQLIDDMFETMYEAPGIGLAATQVNV 54
[49][TOP]
>UniRef100_Q1GWJ8 Peptide deformylase n=1 Tax=Sphingopyxis alaskensis
RepID=Q1GWJ8_SPHAL
Length = 180
Score = 54.7 bits (130), Expect = 3e-06
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L II+ PDPRLR ++ + FD L +L +M E MY G+GLAA QVGV
Sbjct: 7 LPIIETPDPRLRVISKPVETFDAELKQLVADMFETMYDAPGIGLAAIQVGV 57
[50][TOP]
>UniRef100_B1J433 Peptide deformylase n=1 Tax=Pseudomonas putida W619
RepID=B1J433_PSEPW
Length = 168
Score = 54.7 bits (130), Expect = 3e-06
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I+++PDPRLR + + FD++L +L +M E MY+ G+GLAA QV V
Sbjct: 4 LNILEFPDPRLRTIAKPVTEFDDALRQLIDDMFETMYEAPGIGLAATQVNV 54
[51][TOP]
>UniRef100_B0KF30 Peptide deformylase n=1 Tax=Pseudomonas putida GB-1
RepID=B0KF30_PSEPG
Length = 168
Score = 54.7 bits (130), Expect = 3e-06
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I+++PDPRLR + + FD++L +L +M E MY+ G+GLAA QV V
Sbjct: 4 LNILEFPDPRLRTIAKPVTEFDDALRQLIDDMFETMYEAPGIGLAATQVNV 54
[52][TOP]
>UniRef100_A1WWW4 Peptide deformylase n=1 Tax=Halorhodospira halophila SL1
RepID=A1WWW4_HALHL
Length = 162
Score = 54.7 bits (130), Expect = 3e-06
Identities = 25/51 (49%), Positives = 36/51 (70%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L+I+++PDPRLR +A + FD++L L +MIE M+ +GLAAPQV V
Sbjct: 4 LEILEHPDPRLRQPSAPVERFDQALCELVDDMIETMHARSAIGLAAPQVDV 54
[53][TOP]
>UniRef100_C4CR93 Peptide deformylase n=1 Tax=Sphaerobacter thermophilus DSM 20745
RepID=C4CR93_9CHLR
Length = 177
Score = 54.7 bits (130), Expect = 3e-06
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L+++ DPRLR +I D+ L RLA +M+E MY DGVGLA PQVGV
Sbjct: 4 LKLVYEGDPRLRQKAVRIRKVDDDLRRLAADMLETMYAADGVGLAGPQVGV 54
[54][TOP]
>UniRef100_A4XNB3 Peptide deformylase n=1 Tax=Pseudomonas mendocina ymp
RepID=DEF_PSEMY
Length = 168
Score = 54.7 bits (130), Expect = 3e-06
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I+++PDPRLR + ++V D+S+ +L +M E MY G+GLAA QV V
Sbjct: 4 LNILEFPDPRLRTIAKPVDVVDDSIRQLVDDMFETMYDAPGIGLAATQVNV 54
[55][TOP]
>UniRef100_A1VU46 Peptide deformylase n=1 Tax=Polaromonas naphthalenivorans CJ2
RepID=A1VU46_POLNA
Length = 173
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/53 (49%), Positives = 33/53 (62%)
Frame = +1
Query: 250 SPLQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
+PL I++YPDPRL V + FD L +LA M MY +G+GLAA QV V
Sbjct: 2 TPLTILRYPDPRLHTVAKPVAAFDARLRQLADAMFHTMYAAEGIGLAATQVDV 54
[56][TOP]
>UniRef100_C3XBJ7 Peptide deformylase n=1 Tax=Oxalobacter formigenes OXCC13
RepID=C3XBJ7_OXAFO
Length = 208
Score = 54.3 bits (129), Expect = 4e-06
Identities = 28/67 (41%), Positives = 40/67 (59%)
Frame = +1
Query: 208 KLQEVPVVTKLEWTSPLQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGL 387
K+ VV +L + L I++YPDPRL + + F +SL L +M + MY+ GVGL
Sbjct: 17 KISPSTVVPELIQMARLPILRYPDPRLLKPSRPVTDFGDSLKSLIADMAQTMYEAPGVGL 76
Query: 388 AAPQVGV 408
AAPQ+ V
Sbjct: 77 AAPQINV 83
[57][TOP]
>UniRef100_B4X127 Peptide deformylase n=1 Tax=Alcanivorax sp. DG881
RepID=B4X127_9GAMM
Length = 168
Score = 54.3 bits (129), Expect = 4e-06
Identities = 25/51 (49%), Positives = 34/51 (66%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L+I+++PDPRLR V + D+ L +L +MIE MY G+GLAA QV V
Sbjct: 4 LEILEFPDPRLRTVAKPVEKVDDELRKLIDDMIETMYDASGIGLAATQVNV 54
[58][TOP]
>UniRef100_Q2G491 Peptide deformylase n=1 Tax=Novosphingobium aromaticivorans DSM
12444 RepID=DEF_NOVAD
Length = 188
Score = 54.3 bits (129), Expect = 4e-06
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +1
Query: 259 QIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
+II+ PDPRL+ V+ + FD+ L L ++M E MY G+GLAA QVGV
Sbjct: 5 EIIEVPDPRLKQVSVPVEKFDDELKTLVEDMFETMYDAPGIGLAAIQVGV 54
[59][TOP]
>UniRef100_Q3J6U0 Peptide deformylase n=2 Tax=Nitrosococcus oceani RepID=DEF_NITOC
Length = 167
Score = 54.3 bits (129), Expect = 4e-06
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I+ YPDPRLR + D+S+ +LA +M+E MYQ G+GLAA QV V
Sbjct: 4 LNILHYPDPRLRRKAQPVAAVDKSIKKLADDMLETMYQAPGIGLAAVQVNV 54
[60][TOP]
>UniRef100_UPI0001977673 peptide deformylase n=1 Tax=Helicobacter cinaedi CCUG 18818
RepID=UPI0001977673
Length = 175
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/51 (52%), Positives = 34/51 (66%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I+KYP+P LR + K+ FDESL L +M E M + GVGLAA QVG+
Sbjct: 6 LAILKYPNPILRQKSTKVESFDESLHTLLDDMYETMIESGGVGLAAIQVGI 56
[61][TOP]
>UniRef100_Q5P4H5 Peptide deformylase n=1 Tax=Aromatoleum aromaticum EbN1
RepID=Q5P4H5_AZOSE
Length = 167
Score = 53.9 bits (128), Expect = 5e-06
Identities = 26/51 (50%), Positives = 35/51 (68%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I++YPDPRL A + V D+S+ +L ++M E MY+ GVGLAA QV V
Sbjct: 4 LPILRYPDPRLHKHAAPVAVVDDSIRQLVRDMAETMYEAPGVGLAATQVDV 54
[62][TOP]
>UniRef100_B8J1H4 Peptide deformylase n=1 Tax=Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774 RepID=B8J1H4_DESDA
Length = 172
Score = 53.9 bits (128), Expect = 5e-06
Identities = 25/50 (50%), Positives = 34/50 (68%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVG 405
L I+ YPDPRL+ V + + + +LA +M+E MY+ GVGLAAPQVG
Sbjct: 3 LDIVTYPDPRLKEVCEPVAEVTDEIRQLAADMLETMYEAPGVGLAAPQVG 52
[63][TOP]
>UniRef100_A1AXL8 Peptide deformylase n=1 Tax=Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica) RepID=A1AXL8_RUTMC
Length = 185
Score = 53.9 bits (128), Expect = 5e-06
Identities = 25/49 (51%), Positives = 32/49 (65%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQV 402
L I+ YPD RLR +NV DE++ L K+M E +Y DG+GLAA QV
Sbjct: 3 LPILNYPDKRLRTKAKHVNVIDETIQTLIKDMFETIYAKDGIGLAATQV 51
[64][TOP]
>UniRef100_C7MNL2 Peptide deformylase n=1 Tax=Cryptobacterium curtum DSM 15641
RepID=C7MNL2_CRYCD
Length = 175
Score = 53.9 bits (128), Expect = 5e-06
Identities = 26/51 (50%), Positives = 37/51 (72%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
++I+ PDP LR + ++ DESL LA++M E MY+++G GLAAPQVGV
Sbjct: 1 MRIVLSPDPILRQRAEEADIADESLKSLAQQMAETMYENNGCGLAAPQVGV 51
[65][TOP]
>UniRef100_C9RZP6 Peptide deformylase n=2 Tax=Geobacillus RepID=C9RZP6_9BACI
Length = 157
Score = 53.9 bits (128), Expect = 5e-06
Identities = 28/53 (52%), Positives = 32/53 (60%)
Frame = +1
Query: 250 SPLQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
S L I+ YPDP L A + FD L RL +M E M DGVGLAAPQ+GV
Sbjct: 2 SVLPIVTYPDPILEQPCAPVTAFDRRLGRLLDDMYETMLAADGVGLAAPQIGV 54
[66][TOP]
>UniRef100_C2ATJ0 Peptide deformylase n=1 Tax=Tsukamurella paurometabola DSM 20162
RepID=C2ATJ0_TSUPA
Length = 180
Score = 53.9 bits (128), Expect = 5e-06
Identities = 28/53 (52%), Positives = 34/53 (64%)
Frame = +1
Query: 250 SPLQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
S L I YPDP LR ++ VFD L RL +MI+ M+ +G GLAAPQVGV
Sbjct: 2 SVLPIRIYPDPVLRTRADEVTVFDADLARLVDDMIDTMHHHNGAGLAAPQVGV 54
[67][TOP]
>UniRef100_A4IM46 Peptide deformylase n=2 Tax=Geobacillus RepID=A4IM46_GEOTN
Length = 157
Score = 53.9 bits (128), Expect = 5e-06
Identities = 28/53 (52%), Positives = 33/53 (62%)
Frame = +1
Query: 250 SPLQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
S L I+ YP P L A++ VFD L RL +M E M DGVGLAAPQVG+
Sbjct: 2 SVLPIVTYPAPVLEQPCARVTVFDRQLGRLLDDMYETMIAADGVGLAAPQVGI 54
[68][TOP]
>UniRef100_B8BSA6 Dubious peptide deformylase (Fragment) n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8BSA6_THAPS
Length = 180
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 5/56 (8%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFD-----ESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L+++KYP P LRA NA+I + + R+AKEM +MY +G GLAAPQVG+
Sbjct: 3 LRVLKYPHPALRAPNAEITEEELTGPGSEISRIAKEMFLVMYATNGAGLAAPQVGI 58
[69][TOP]
>UniRef100_B5YLS0 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B5YLS0_THAPS
Length = 192
Score = 53.9 bits (128), Expect = 5e-06
Identities = 27/50 (54%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Frame = +1
Query: 262 IIKYPDPRLRAV-NAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
I +YP P LR V N I+ FD++ AKEM+ IMY+ GVGLAAPQ+G+
Sbjct: 15 ITEYPRPALRRVPNTPISQFDDAFQTKAKEMLMIMYESKGVGLAAPQIGL 64
[70][TOP]
>UniRef100_A4VFH8 Peptide deformylase n=1 Tax=Pseudomonas stutzeri A1501
RepID=DEF_PSEU5
Length = 168
Score = 53.9 bits (128), Expect = 5e-06
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I+++PDPRLR + ++V D+ + +L +M E MY+ G+GLAA QV V
Sbjct: 4 LNILEFPDPRLRTIAKPVDVVDDGIRQLVDDMFETMYEAPGIGLAATQVNV 54
[71][TOP]
>UniRef100_C4K6Y0 Peptide deformylase n=1 Tax=Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum) RepID=DEF_HAMD5
Length = 171
Score = 53.9 bits (128), Expect = 5e-06
Identities = 23/53 (43%), Positives = 37/53 (69%)
Frame = +1
Query: 250 SPLQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
S LQI+ +PD RLR + + + D+ + ++A +M+E MYQ +G+GLAA QV +
Sbjct: 2 SILQILHFPDDRLRKIASPVKKMDDQIRQIADDMLETMYQAEGIGLAATQVNI 54
[72][TOP]
>UniRef100_Q88RR1 Peptide deformylase 1 n=2 Tax=Pseudomonas putida RepID=DEF1_PSEPK
Length = 168
Score = 53.9 bits (128), Expect = 5e-06
Identities = 24/51 (47%), Positives = 35/51 (68%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I+++PDPRLR + + FD++L +L +M E MY+ G+GLAA QV V
Sbjct: 4 LNILEFPDPRLRTLAKPVTEFDDALRQLIDDMFETMYEAPGIGLAATQVNV 54
[73][TOP]
>UniRef100_Q1LHD9 Peptide deformylase n=1 Tax=Ralstonia metallidurans CH34
RepID=Q1LHD9_RALME
Length = 168
Score = 53.5 bits (127), Expect = 7e-06
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I+ YPDPRL V + V D+ + +L K+M E MY+ G+GLAA QV V
Sbjct: 4 LDILTYPDPRLHKVAKPVEVVDDRIRQLVKDMAETMYEAPGIGLAATQVDV 54
[74][TOP]
>UniRef100_A5IAY2 Peptide deformylase n=4 Tax=Legionella pneumophila
RepID=A5IAY2_LEGPC
Length = 170
Score = 53.5 bits (127), Expect = 7e-06
Identities = 25/50 (50%), Positives = 32/50 (64%)
Frame = +1
Query: 259 QIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
+I+ PD RLR + + FDESL L +M + MY GVGLAAPQ+GV
Sbjct: 5 KILYLPDERLRKIAKPVETFDESLQTLINDMFDTMYDARGVGLAAPQIGV 54
[75][TOP]
>UniRef100_A1V9B3 Peptide deformylase n=3 Tax=Desulfovibrio vulgaris
RepID=A1V9B3_DESVV
Length = 171
Score = 53.5 bits (127), Expect = 7e-06
Identities = 23/49 (46%), Positives = 35/49 (71%)
Frame = +1
Query: 259 QIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVG 405
+++KYPD RL I+ + + +LA +M+E MY++DG+GLAAPQVG
Sbjct: 4 EVLKYPDERLAIECDDIDEITDDIRQLAADMVETMYREDGIGLAAPQVG 52
[76][TOP]
>UniRef100_C0H317 Peptide deformylase n=1 Tax=Halothiobacillus neapolitanus c2
RepID=C0H317_THINE
Length = 171
Score = 53.5 bits (127), Expect = 7e-06
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +1
Query: 250 SPLQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
S L+++ +PD RLR V A++ FD + RL+++M+E MY GVGLAA Q+ V
Sbjct: 2 SLLEVLLFPDERLRRVAAEVKQFDARVQRLSEQMLETMYDARGVGLAATQIDV 54
[77][TOP]
>UniRef100_A7JSF2 Peptide deformylase n=1 Tax=Mannheimia haemolytica PHL213
RepID=A7JSF2_PASHA
Length = 170
Score = 53.5 bits (127), Expect = 7e-06
Identities = 24/51 (47%), Positives = 33/51 (64%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L ++ YPD +L V + DE+L R +M E MY+ +G+GLAAPQVGV
Sbjct: 4 LDVVLYPDEKLATVCEPVEQVDEALNRFIDDMFETMYEHEGIGLAAPQVGV 54
[78][TOP]
>UniRef100_A5PBC4 Peptide deformylase n=1 Tax=Erythrobacter sp. SD-21
RepID=A5PBC4_9SPHN
Length = 188
Score = 53.5 bits (127), Expect = 7e-06
Identities = 24/50 (48%), Positives = 33/50 (66%)
Frame = +1
Query: 259 QIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
+I++ PDPRL+ V+ + FD+ L L +M E MY G+GLAA QVGV
Sbjct: 5 EILEVPDPRLKVVSEPVTEFDDELRELVSDMFETMYDAPGIGLAAIQVGV 54
[79][TOP]
>UniRef100_A3UFC1 Peptide deformylase n=1 Tax=Oceanicaulis alexandrii HTCC2633
RepID=A3UFC1_9RHOB
Length = 175
Score = 53.5 bits (127), Expect = 7e-06
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +1
Query: 259 QIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
+I+ PDPRL+ V+ ++ D++L L +M+E MY DG+GLAA QVGV
Sbjct: 5 EILTVPDPRLKLVSKPVDAVDDALRALMDDMVETMYAADGIGLAAIQVGV 54
[80][TOP]
>UniRef100_UPI0001BB4A21 peptide deformylase n=1 Tax=alpha proteobacterium HIMB114
RepID=UPI0001BB4A21
Length = 171
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +1
Query: 250 SPLQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
S L+I+K PDP LR + +++ D + L M+E MYQ G+GLAAPQVG+
Sbjct: 2 SVLEILKEPDPILRKKSDEVSKVDNDIRALMDNMLETMYQAPGIGLAAPQVGI 54
[81][TOP]
>UniRef100_Q2L0L3 Peptide deformylase n=1 Tax=Bordetella avium 197N
RepID=Q2L0L3_BORA1
Length = 170
Score = 53.1 bits (126), Expect = 9e-06
Identities = 26/51 (50%), Positives = 33/51 (64%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I++YPDPRL V + V D+ + +L K+M E MY GVGLAA QV V
Sbjct: 4 LPILRYPDPRLHKVAKPVAVVDDRIRQLVKDMAETMYDAPGVGLAATQVDV 54
[82][TOP]
>UniRef100_Q02V62 Peptide deformylase n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14
RepID=Q02V62_PSEAB
Length = 168
Score = 53.1 bits (126), Expect = 9e-06
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I+++PDPRLR + + V D+++ +L +M E MY+ G+GLAA QV V
Sbjct: 4 LNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNV 54
[83][TOP]
>UniRef100_C6BVK1 Peptide deformylase n=1 Tax=Desulfovibrio salexigens DSM 2638
RepID=C6BVK1_DESAD
Length = 170
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I+ YP+ L+ V +++ L + MIE MY+DDGVGLAAPQVGV
Sbjct: 3 LDILAYPEESLKEVCSRVEEVTPELKEIIDNMIETMYEDDGVGLAAPQVGV 53
[84][TOP]
>UniRef100_B8DMM6 Peptide deformylase n=1 Tax=Desulfovibrio vulgaris str. 'Miyazaki
F' RepID=B8DMM6_DESVM
Length = 184
Score = 53.1 bits (126), Expect = 9e-06
Identities = 23/49 (46%), Positives = 33/49 (67%)
Frame = +1
Query: 259 QIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVG 405
++++YPDPRL I + + +LA +M E MY+ DG+GLAAPQVG
Sbjct: 4 EVLQYPDPRLAVECEDITEITDEIRQLAADMAETMYRQDGIGLAAPQVG 52
[85][TOP]
>UniRef100_B3EAN9 Peptide deformylase n=1 Tax=Geobacter lovleyi SZ RepID=B3EAN9_GEOLS
Length = 166
Score = 53.1 bits (126), Expect = 9e-06
Identities = 22/49 (44%), Positives = 35/49 (71%)
Frame = +1
Query: 262 IIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
I+ +PDP L+ +A + + + +++LA++M E MY GVGLAAPQ+GV
Sbjct: 5 ILAFPDPLLKQKSAPVTIITDEIIQLARDMAETMYDAPGVGLAAPQIGV 53
[86][TOP]
>UniRef100_A6UX81 Peptide deformylase n=1 Tax=Pseudomonas aeruginosa PA7
RepID=A6UX81_PSEA7
Length = 168
Score = 53.1 bits (126), Expect = 9e-06
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I+++PDPRLR + + V D+++ +L +M E MY+ G+GLAA QV V
Sbjct: 4 LNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNV 54
[87][TOP]
>UniRef100_C4ZKT7 Peptide deformylase n=1 Tax=Thauera sp. MZ1T RepID=C4ZKT7_THASP
Length = 167
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I++YPDPRL V A + D+ + RL +M E MY+ G+GLAA QV V
Sbjct: 4 LPILRYPDPRLHTVAAPVGRVDDEIRRLIADMAETMYEAPGIGLAATQVDV 54
[88][TOP]
>UniRef100_B8KLT5 Peptide deformylase n=1 Tax=gamma proteobacterium NOR5-3
RepID=B8KLT5_9GAMM
Length = 168
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I+++PDPRLR V + V D++L L M+E MY G+GLAA QV V
Sbjct: 4 LDILEFPDPRLRTVAKPVEVVDDALRTLIDNMLETMYAASGIGLAATQVNV 54
[89][TOP]
>UniRef100_A5WBG1 Peptide deformylase n=1 Tax=Psychrobacter sp. PRwf-1
RepID=DEF_PSYWF
Length = 176
Score = 53.1 bits (126), Expect = 9e-06
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQV 402
L I+ YPDPRLR + I D + +L K+MIE MY G+GLAA QV
Sbjct: 4 LPILSYPDPRLRTIAEPIKTVDAEIKQLIKDMIETMYDAKGIGLAATQV 52
[90][TOP]
>UniRef100_Q9I7A8 Peptide deformylase n=4 Tax=Pseudomonas aeruginosa RepID=DEF_PSEAE
Length = 168
Score = 53.1 bits (126), Expect = 9e-06
Identities = 23/51 (45%), Positives = 35/51 (68%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L I+++PDPRLR + + V D+++ +L +M E MY+ G+GLAA QV V
Sbjct: 4 LNILEFPDPRLRTIAKPVEVVDDAVRQLIDDMFETMYEAPGIGLAATQVNV 54
[91][TOP]
>UniRef100_B0UWZ5 Peptide deformylase n=1 Tax=Haemophilus somnus 2336 RepID=DEF_HAES2
Length = 170
Score = 53.1 bits (126), Expect = 9e-06
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L ++ YPD RL+ V ++VFDE L M E MY ++G+GLAA QV V
Sbjct: 4 LNVLIYPDERLKTVAEPVSVFDEELQTFIDNMFETMYHEEGIGLAATQVNV 54
[92][TOP]
>UniRef100_Q0I181 Peptide deformylase n=1 Tax=Haemophilus somnus 129PT
RepID=DEF_HAES1
Length = 170
Score = 53.1 bits (126), Expect = 9e-06
Identities = 24/51 (47%), Positives = 32/51 (62%)
Frame = +1
Query: 256 LQIIKYPDPRLRAVNAKINVFDESLMRLAKEMIEIMYQDDGVGLAAPQVGV 408
L ++ YPD RL+ V ++VFDE L M E MY ++G+GLAA QV V
Sbjct: 4 LNVLIYPDERLKTVAEPVSVFDEELQTFIDNMFETMYHEEGIGLAATQVNV 54