BP092703 ( MX258a01_r )

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[1][TOP]
>UniRef100_A8J275 3'-5' exoribonuclease PH component of the exosome n=1
           Tax=Chlamydomonas reinhardtii RepID=A8J275_CHLRE
          Length = 245

 Score =  145 bits (365), Expect = 2e-33
 Identities = 73/74 (98%), Positives = 73/74 (98%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE
Sbjct: 1   MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 60

Query: 468 LREEGALVVCE*SM 509
           LREEGALVVCE SM
Sbjct: 61  LREEGALVVCEYSM 74

[2][TOP]
>UniRef100_C1EDA5 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EDA5_9CHLO
          Length = 261

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 48/74 (64%), Positives = 56/74 (75%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           ME+VS EGLRLDGRRP+E RR+ C+L  L  +DGSA+FE+GNTKVLAAV GPH   R SE
Sbjct: 1   MEYVSLEGLRLDGRRPKETRRMRCELTALPGSDGSAVFELGNTKVLAAVHGPHECRRPSE 60

Query: 468 LREEGALVVCE*SM 509
             E+  LV CE SM
Sbjct: 61  RLEDRLLVKCEVSM 74

[3][TOP]
>UniRef100_B9I8T9 Predicted protein n=2 Tax=Populus RepID=B9I8T9_POPTR
          Length = 241

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 46/74 (62%), Positives = 58/74 (78%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           MEFV+PEGLRLDGRRP E+R++  Q+  ++ ADGSA+FEMGNTKV+AAV+GP  V  RS+
Sbjct: 1   MEFVNPEGLRLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60

Query: 468 LREEGALVVCE*SM 509
              + ALV CE SM
Sbjct: 61  QINDQALVRCEYSM 74

[4][TOP]
>UniRef100_C6TJ02 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6TJ02_SOYBN
          Length = 190

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 47/74 (63%), Positives = 57/74 (77%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           ME+VSPEGLRLDGRRP E+R+I  ++  +S ADGSAIFEMGNTKV+AAV+GP  V  R++
Sbjct: 1   MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRNQ 60

Query: 468 LREEGALVVCE*SM 509
                ALV CE SM
Sbjct: 61  QISSHALVRCEYSM 74

[5][TOP]
>UniRef100_B9SWZ0 Exosome complex exonuclease RRP41, putative n=1 Tax=Ricinus
           communis RepID=B9SWZ0_RICCO
          Length = 241

 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 46/74 (62%), Positives = 58/74 (78%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           ME+VSPEGLRLDGRRP E+R++  Q+  +S ADGSA+FEMGNTKV+AAV+GP  V  RS+
Sbjct: 1   MEYVSPEGLRLDGRRPMEMRQLRAQIGAVSKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60

Query: 468 LREEGALVVCE*SM 509
              + ALV CE +M
Sbjct: 61  QIIDQALVRCEYTM 74

[6][TOP]
>UniRef100_A5BIU1 Chromosome chr15 scaffold_40, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A5BIU1_VITVI
          Length = 241

 Score = 93.6 bits (231), Expect = 7e-18
 Identities = 46/74 (62%), Positives = 57/74 (77%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           MEFVSPEGLRLDGRRP E+R+I  ++  ++ ADGSA FEMGNTKV+AAV+GP  V  RS+
Sbjct: 1   MEFVSPEGLRLDGRRPMEMRQIRGEIGAVAKADGSAFFEMGNTKVIAAVYGPREVENRSQ 60

Query: 468 LREEGALVVCE*SM 509
              + ALV CE +M
Sbjct: 61  QISDQALVRCEYTM 74

[7][TOP]
>UniRef100_Q9SP08 Exonuclease RRP41 n=1 Tax=Arabidopsis thaliana RepID=Q9SP08_ARATH
          Length = 241

 Score = 88.6 bits (218), Expect = 2e-16
 Identities = 43/75 (57%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           ME+V+PEGLRLDGRR  E+R+I  ++ V+S ADGSA+FEMGNTKV+AAV+GP  +  +S+
Sbjct: 1   MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 60

Query: 468 LRE-EGALVVCE*SM 509
            ++ + A+V+CE SM
Sbjct: 61  QKKNDHAVVLCEYSM 75

[8][TOP]
>UniRef100_A9TY02 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TY02_PHYPA
          Length = 246

 Score = 87.8 bits (216), Expect = 4e-16
 Identities = 42/73 (57%), Positives = 55/73 (75%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
           EFVSPEGLRLDGRRP E+R ++  + V+ +ADGSA+F MGNT+V+A V+GPH V  ++  
Sbjct: 4   EFVSPEGLRLDGRRPPEMRHLHAVVGVVPSADGSALFHMGNTQVMAVVYGPHEVHNKAHQ 63

Query: 471 REEGALVVCE*SM 509
             + ALV CE SM
Sbjct: 64  LHDKALVRCEYSM 76

[9][TOP]
>UniRef100_B3RL48 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
           RepID=B3RL48_TRIAD
          Length = 243

 Score = 84.7 bits (208), Expect = 3e-15
 Identities = 37/64 (57%), Positives = 49/64 (76%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           ME +SPEGLR+DGRRP E+RR NC+L VLS ADGSA  E GNTK LA++ GPH    +++
Sbjct: 1   MEIISPEGLRIDGRRPEEIRRFNCRLGVLSRADGSAYLEQGNTKALASINGPHQAGDKAK 60

Query: 468 LREE 479
           ++ +
Sbjct: 61  IKHD 64

[10][TOP]
>UniRef100_Q16KB4 Exosome complex exonuclease RRP41, putative n=1 Tax=Aedes aegypti
           RepID=Q16KB4_AEDAE
          Length = 245

 Score = 84.0 bits (206), Expect = 5e-15
 Identities = 44/74 (59%), Positives = 50/74 (67%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           ME +S EGLRLDGRR  ELRRI C+L V S  DGSA  E GNTKVLAAV+GPH    +  
Sbjct: 1   MELLSDEGLRLDGRRANELRRIQCKLGVFSQPDGSAYIEQGNTKVLAAVYGPHQAPAKKS 60

Query: 468 LREEGALVVCE*SM 509
             EE  +V C+ SM
Sbjct: 61  SHEE-VIVNCQYSM 73

[11][TOP]
>UniRef100_UPI0001923A5C PREDICTED: similar to putative exosome complex exonuclease RRP41
           n=1 Tax=Hydra magnipapillata RepID=UPI0001923A5C
          Length = 244

 Score = 83.2 bits (204), Expect = 9e-15
 Identities = 38/77 (49%), Positives = 54/77 (70%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
           ++ ++ VSPEGLR DGR+  ELR+I  +  + S ADGSA  E GNTKV+A+V+GPH V+ 
Sbjct: 1   MAGLDLVSPEGLRFDGRKCHELRKITAKKGIFSQADGSAYIEQGNTKVIASVYGPHEVSN 60

Query: 459 RSELREEGALVVCE*SM 509
           RS+   +  L+ C+ SM
Sbjct: 61  RSKTLHDSTLINCQFSM 77

[12][TOP]
>UniRef100_B0XII7 Exosome complex exonuclease RRP41 n=1 Tax=Culex quinquefasciatus
           RepID=B0XII7_CULQU
          Length = 245

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 44/74 (59%), Positives = 50/74 (67%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           ME +S EGLRLDGRR  ELRRI C+L V S  DGSA  E GNTKVLAAV+GPH    +  
Sbjct: 1   MELLSDEGLRLDGRRSNELRRIQCKLGVFSQPDGSAYVEQGNTKVLAAVYGPHQAPAKKS 60

Query: 468 LREEGALVVCE*SM 509
             EE  +V C+ SM
Sbjct: 61  NHEE-CVVNCQYSM 73

[13][TOP]
>UniRef100_C1MWG2 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1MWG2_9CHLO
          Length = 245

 Score = 81.3 bits (199), Expect = 4e-14
 Identities = 39/71 (54%), Positives = 49/71 (69%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           ME+VS EGLRLDGRRP+E R++ C + VL  ADGSA F  GNT+V+ AV GP     R E
Sbjct: 1   MEYVSLEGLRLDGRRPKETRQMRCAMGVLPAADGSAEFRAGNTRVMCAVHGPRECVNRGE 60

Query: 468 LREEGALVVCE 500
             +E A++ CE
Sbjct: 61  RDDERAIIKCE 71

[14][TOP]
>UniRef100_Q54EU6 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum
           RepID=Q54EU6_DICDI
          Length = 247

 Score = 80.9 bits (198), Expect = 5e-14
 Identities = 36/74 (48%), Positives = 53/74 (71%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
           +S + ++SPEGLR+DGRR  ELRRIN ++ +   ADGSA +E GNTK++AAV+GP  ++ 
Sbjct: 1   MSKLSYISPEGLRIDGRRANELRRINVEMGIFKRADGSAYYEQGNTKIIAAVYGPREISV 60

Query: 459 RSELREEGALVVCE 500
             +   + A+V CE
Sbjct: 61  SGKGVFDRAVVKCE 74

[15][TOP]
>UniRef100_B7P8R1 Exosomal 3'-5' exoribonuclease complex, subunit Rrp41, putative n=1
           Tax=Ixodes scapularis RepID=B7P8R1_IXOSC
          Length = 246

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
           ++ +E +S EG RLDGR+P E R+I+C+L V S ADGSA  E GN KVLAAV+GPH    
Sbjct: 1   MAGLELLSDEGYRLDGRKPNEQRKIDCRLGVFSQADGSAYIEQGNAKVLAAVYGPHEPRG 60

Query: 456 RRSELREEGALVVCE*SM 509
            RS    +  LV C+ SM
Sbjct: 61  NRSRALHDRVLVNCQFSM 78

[16][TOP]
>UniRef100_A7S1D9 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S1D9_NEMVE
          Length = 247

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 36/71 (50%), Positives = 52/71 (73%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
           ++ +E +SPEGLR+DGR+  ELR++ C++ VLS ADGSA  EMGNTK LA V+GPH V  
Sbjct: 1   MAGLEVLSPEGLRIDGRKASELRKMVCKVGVLSQADGSAYIEMGNTKALATVYGPHEVQN 60

Query: 459 RSELREEGALV 491
           +++   +  L+
Sbjct: 61  KAKALHDRVLL 71

[17][TOP]
>UniRef100_UPI000186CE6C Exosome complex exonuclease RRP41, putative n=1 Tax=Pediculus
           humanus corporis RepID=UPI000186CE6C
          Length = 253

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 38/70 (54%), Positives = 50/70 (71%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
           + +S + LRLDGRR  ELR+I C+L V S  DGSA  EMGNTKVLAAV+GPH V  R++ 
Sbjct: 3   KLISDQNLRLDGRRASELRQIRCKLGVFSQPDGSAYIEMGNTKVLAAVYGPHQVRGRTKP 62

Query: 471 REEGALVVCE 500
             + A++ C+
Sbjct: 63  LLDAAVINCQ 72

[18][TOP]
>UniRef100_B4MX14 GK15569 n=1 Tax=Drosophila willistoni RepID=B4MX14_DROWI
          Length = 251

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 36/71 (50%), Positives = 48/71 (67%)
 Frame = +3

Query: 282 SSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461
           ++ E +S +GLRLDGRRP ELR I C+L V    DGSA  E GNTKVLAAV+GPH    +
Sbjct: 3   ANFELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKGK 62

Query: 462 SELREEGALVV 494
           ++  E   +++
Sbjct: 63  NKSSESNDVII 73

[19][TOP]
>UniRef100_UPI000179264C PREDICTED: similar to exosome complex exonuclease RRP41, partial
           n=1 Tax=Acyrthosiphon pisum RepID=UPI000179264C
          Length = 122

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV-TRRS 464
           M+ +S +GLR DGRR  ELRRI C++ V +  DGSA  E GNTKV+AA++GPH + T R+
Sbjct: 1   MDLLSRQGLRTDGRRSGELRRIRCKMGVFNQPDGSAYLEQGNTKVVAAIYGPHEIRTNRA 60

Query: 465 ELREEGALVVCE*SM 509
           +   + A++ C+ SM
Sbjct: 61  KAPNDSAVINCQYSM 75

[20][TOP]
>UniRef100_C4WSG4 ACYPI001085 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSG4_ACYPI
          Length = 213

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV-TRRS 464
           M+ +S +GLR DGRR  ELRRI C++ V +  DGSA  E GNTKV+AA++GPH + T R+
Sbjct: 1   MDLLSRQGLRTDGRRSGELRRIRCKMGVFNQPDGSAYLEQGNTKVVAAIYGPHEIRTNRA 60

Query: 465 ELREEGALVVCE*SM 509
           +   + A++ C+ SM
Sbjct: 61  KAPNDSAVINCQYSM 75

[21][TOP]
>UniRef100_B4JCT4 GH10637 n=1 Tax=Drosophila grimshawi RepID=B4JCT4_DROGR
          Length = 249

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 39/61 (63%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH-AVTRRS 464
           ME +S +GLRLDGRRP ELR I C+L V    DGSA  E GNTKVLAAV+GPH A  ++S
Sbjct: 5   MELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKAKKS 64

Query: 465 E 467
           E
Sbjct: 65  E 65

[22][TOP]
>UniRef100_UPI00006A4B1C PREDICTED: similar to LOC495942 protein n=1 Tax=Ciona intestinalis
           RepID=UPI00006A4B1C
          Length = 247

 Score = 77.0 bits (188), Expect = 7e-13
 Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
           ++  E +S EG R DGR+P ELRR+ C + V + ADGSA  E GNTKVLAA++GPH  + 
Sbjct: 1   MAGFELISDEGYRFDGRKPSELRRVRCNMGVFTQADGSAYIEQGNTKVLAAIYGPHEASN 60

Query: 459 --RSELREEGALVVCE 500
             RS +  +   + CE
Sbjct: 61  NMRSRVCLDKCFINCE 76

[23][TOP]
>UniRef100_B4P324 GE11809 n=1 Tax=Drosophila yakuba RepID=B4P324_DROYA
          Length = 246

 Score = 77.0 bits (188), Expect = 7e-13
 Identities = 36/52 (69%), Positives = 40/52 (76%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
           E +S +GLRLDGRRP ELRRI C+L V    DGSA  E GNTKVLAAV+GPH
Sbjct: 6   ELLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57

[24][TOP]
>UniRef100_B4KHM2 GI10716 n=1 Tax=Drosophila mojavensis RepID=B4KHM2_DROMO
          Length = 249

 Score = 77.0 bits (188), Expect = 7e-13
 Identities = 36/53 (67%), Positives = 40/53 (75%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
           ME +S +GLRLDGRRP ELR I C+L V    DGSA  E GNTKVLAAV+GPH
Sbjct: 5   MELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57

[25][TOP]
>UniRef100_B3NB10 GG10219 n=1 Tax=Drosophila erecta RepID=B3NB10_DROER
          Length = 246

 Score = 77.0 bits (188), Expect = 7e-13
 Identities = 36/52 (69%), Positives = 40/52 (76%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
           E +S +GLRLDGRRP ELRRI C+L V    DGSA  E GNTKVLAAV+GPH
Sbjct: 6   ELLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57

[26][TOP]
>UniRef100_B3MN36 GF15621 n=1 Tax=Drosophila ananassae RepID=B3MN36_DROAN
          Length = 249

 Score = 77.0 bits (188), Expect = 7e-13
 Identities = 36/55 (65%), Positives = 41/55 (74%)
 Frame = +3

Query: 282 SSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
           S+ E +S +GLRLDGRRP ELR I C+L V    DGSA  E GNTKVLAAV+GPH
Sbjct: 3   SNFELLSEQGLRLDGRRPHELRHIQCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57

[27][TOP]
>UniRef100_B4M9A1 GJ18275 n=1 Tax=Drosophila virilis RepID=B4M9A1_DROVI
          Length = 249

 Score = 76.6 bits (187), Expect = 9e-13
 Identities = 36/55 (65%), Positives = 41/55 (74%)
 Frame = +3

Query: 282 SSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
           S +E +S +GLRLDGRRP ELR I C+L V    DGSA  E GNTKVLAAV+GPH
Sbjct: 3   SRIELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57

[28][TOP]
>UniRef100_A8PTK4 Putative exosome complex exonuclease RRP41, putative n=1 Tax=Brugia
           malayi RepID=A8PTK4_BRUMA
          Length = 249

 Score = 76.6 bits (187), Expect = 9e-13
 Identities = 36/74 (48%), Positives = 49/74 (66%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           M  +S  G R DGR+P ++R +N +L V S ADGSA  E GNTKVL AV+GP+   +RS 
Sbjct: 1   MSIISEHGFRQDGRKPHQIRNLNYKLGVYSQADGSAYLEQGNTKVLCAVYGPYEPKQRSR 60

Query: 468 LREEGALVVCE*SM 509
           L E+  ++ C+ SM
Sbjct: 61  LLEDRCIINCQYSM 74

[29][TOP]
>UniRef100_B9G2C8 Putative uncharacterized protein n=2 Tax=Oryza sativa
           RepID=B9G2C8_ORYSJ
          Length = 242

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 37/73 (50%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
 Frame = +3

Query: 288 MEFVSP-EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR- 461
           ME+V+P  G R+DGRRP E+R++  ++ V++ ADGSA+FEMGNT+V+AAV+GP  V  + 
Sbjct: 1   MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKG 60

Query: 462 SELREEGALVVCE 500
            ++  + ALV CE
Sbjct: 61  QQVNSKDALVRCE 73

[30][TOP]
>UniRef100_B4FDA8 Putative uncharacterized protein n=1 Tax=Zea mays
           RepID=B4FDA8_MAIZE
          Length = 242

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 37/73 (50%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
 Frame = +3

Query: 288 MEFVSP-EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR- 461
           ME+V+P  G R+DGRRP E+R++  ++ V++ ADGSA+FEMGNT+V+AAV+GP  V  + 
Sbjct: 1   MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKG 60

Query: 462 SELREEGALVVCE 500
            ++  + ALV CE
Sbjct: 61  QQVNSKEALVRCE 73

[31][TOP]
>UniRef100_Q9VK19 FI07225p n=1 Tax=Drosophila melanogaster RepID=Q9VK19_DROME
          Length = 246

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 35/52 (67%), Positives = 40/52 (76%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
           + +S +GLRLDGRRP ELRRI C+L V    DGSA  E GNTKVLAAV+GPH
Sbjct: 6   DLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57

[32][TOP]
>UniRef100_Q8SYC8 RE67757p n=1 Tax=Drosophila melanogaster RepID=Q8SYC8_DROME
          Length = 246

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 35/52 (67%), Positives = 40/52 (76%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
           + +S +GLRLDGRRP ELRRI C+L V    DGSA  E GNTKVLAAV+GPH
Sbjct: 6   DLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57

[33][TOP]
>UniRef100_B4IEH2 GM25757 n=1 Tax=Drosophila sechellia RepID=B4IEH2_DROSE
          Length = 246

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 35/52 (67%), Positives = 40/52 (76%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
           + +S +GLRLDGRRP ELRRI C+L V    DGSA  E GNTKVLAAV+GPH
Sbjct: 6   DLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57

[34][TOP]
>UniRef100_C5YZ99 Putative uncharacterized protein Sb09g022550 n=1 Tax=Sorghum
           bicolor RepID=C5YZ99_SORBI
          Length = 242

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 37/73 (50%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
 Frame = +3

Query: 288 MEFVSP-EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR- 461
           ME+V+P  G R+DGRRP E+R++  ++ V++ ADGSA+FEMGNT+V+AAV+GP  V  + 
Sbjct: 1   MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKG 60

Query: 462 SELREEGALVVCE 500
            ++    ALV CE
Sbjct: 61  QQVNSNEALVRCE 73

[35][TOP]
>UniRef100_Q29KH8 GA13761 n=2 Tax=pseudoobscura subgroup RepID=Q29KH8_DROPS
          Length = 249

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 35/54 (64%), Positives = 40/54 (74%)
 Frame = +3

Query: 285 SMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
           + E +S +GLRLDGRRP ELR I C+L V    DGSA  E GNTKVLAAV+GPH
Sbjct: 4   NFELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57

[36][TOP]
>UniRef100_C5YVG7 Putative uncharacterized protein Sb09g028170 n=1 Tax=Sorghum
           bicolor RepID=C5YVG7_SORBI
          Length = 242

 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 36/73 (49%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
 Frame = +3

Query: 288 MEFVSP-EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR- 461
           ME+V+P  G R+DGRRP E+R++  ++ +++ ADGSA+FEMGNT+V+AAV+GP  V  + 
Sbjct: 1   MEYVNPLTGFRVDGRRPNEMRQLKGEVGIVARADGSALFEMGNTRVIAAVYGPREVQNKG 60

Query: 462 SELREEGALVVCE 500
            ++    ALV CE
Sbjct: 61  QQVNSNEALVRCE 73

[37][TOP]
>UniRef100_B6T763 Exosome complex exonuclease RRP41 n=1 Tax=Zea mays
           RepID=B6T763_MAIZE
          Length = 242

 Score = 74.7 bits (182), Expect = 3e-12
 Identities = 37/73 (50%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
 Frame = +3

Query: 288 MEFVSP-EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR- 461
           ME+V+P  G R+DGRRP E+R++  ++ V+  ADGSA+FEMGNT+V+AAV+GP  V  + 
Sbjct: 1   MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVVRADGSALFEMGNTRVIAAVYGPREVQNKG 60

Query: 462 SELREEGALVVCE 500
            ++  + ALV CE
Sbjct: 61  QQVNSKEALVRCE 73

[38][TOP]
>UniRef100_UPI0001862F93 hypothetical protein BRAFLDRAFT_218985 n=1 Tax=Branchiostoma
           floridae RepID=UPI0001862F93
          Length = 244

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
           ++ +E +S +G R+DGRR  ELR++  ++ V + ADGSA  E GNTK LA V+GPH V +
Sbjct: 1   MAGLEIISDQGYRIDGRRSSELRKVCARMGVFTQADGSAYIEQGNTKALATVYGPHEVRK 60

Query: 459 -RSELREEGALVVCE*SM 509
            R +++ + A+V C+ SM
Sbjct: 61  GRGKIQHDRAVVNCQFSM 78

[39][TOP]
>UniRef100_UPI00003608A8 UPI00003608A8 related cluster n=1 Tax=Takifugu rubripes
           RepID=UPI00003608A8
          Length = 245

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
           ++ +E +S +G R+DGR+  ELR+I  ++ V + ADGSA  E GNTKVLA V+GPH +  
Sbjct: 1   MAGLELLSDQGYRIDGRKATELRKIQARMGVFAQADGSAYLEQGNTKVLAVVYGPHEMRG 60

Query: 456 RRSELREEGALVVCE*SM 509
            RS  R + A++ C+ SM
Sbjct: 61  SRSRARHDRAVINCQYSM 78

[40][TOP]
>UniRef100_C3XU58 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
           RepID=C3XU58_BRAFL
          Length = 246

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
           ++ +E +S +G R+DGRR  ELR++  ++ V + ADGSA  E GNTK LA V+GPH V +
Sbjct: 1   MAGLEIISDQGYRIDGRRSSELRKVCARMGVFTQADGSAYIEQGNTKALATVYGPHEVRK 60

Query: 459 -RSELREEGALVVCE*SM 509
            R +++ + A+V C+ SM
Sbjct: 61  GRGKIQHDRAVVNCQFSM 78

[41][TOP]
>UniRef100_UPI00017B08EC UPI00017B08EC related cluster n=1 Tax=Tetraodon nigroviridis
           RepID=UPI00017B08EC
          Length = 245

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
           ++ +E +S +G R+DGR+  ELR+I  ++ V + ADGSA  E GNTK LA V+GPH +  
Sbjct: 1   MAGLELLSDQGYRIDGRKATELRKIQARMGVFAQADGSAYLEQGNTKALAVVYGPHEMRG 60

Query: 456 RRSELREEGALVVCE*SM 509
            RS  R + A++ C+ SM
Sbjct: 61  SRSRARHDRAVINCQYSM 78

[42][TOP]
>UniRef100_UPI0000EDBA5C PREDICTED: similar to Chain C, Structure Of The Human Rna Exosome
           Composed Of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42,
           Csl4, Rrp4, And Rrp40 n=1 Tax=Ornithorhynchus anatinus
           RepID=UPI0000EDBA5C
          Length = 245

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
           ++ +E +S EG R+DGRR  ELR+I  ++ V + ADGSA  E GNTK LA V+GPH +  
Sbjct: 1   MAGLELLSDEGYRVDGRRAGELRKIEARMGVFAQADGSAYIEQGNTKALAVVYGPHEMRG 60

Query: 456 RRSELREEGALVVCE*SM 509
            RS    + ALV C+ SM
Sbjct: 61  LRSRALPDRALVNCQFSM 78

[43][TOP]
>UniRef100_Q6PBZ8 Exosc4 protein n=1 Tax=Danio rerio RepID=Q6PBZ8_DANRE
          Length = 245

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
           ++ +E +S +G RLDGR+  ELR++  ++ V + ADGSA  E GNTK LA V+GPH +  
Sbjct: 1   MAGLELLSDQGYRLDGRKATELRKVQARMSVFAQADGSAYLEQGNTKALAVVYGPHEIRG 60

Query: 456 RRSELREEGALVVCE*SM 509
            RS+   + A++ C+ SM
Sbjct: 61  SRSKSLHDRAIINCQYSM 78

[44][TOP]
>UniRef100_B5X813 Exosome complex exonuclease RRP41 n=1 Tax=Salmo salar
           RepID=B5X813_SALSA
          Length = 245

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
           ++ +E +S +G RLDGR+  ELR++  ++ V + ADGSA  E GNTK LA V+GPH V  
Sbjct: 1   MAGLELLSDQGYRLDGRKAAELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVRG 60

Query: 456 RRSELREEGALVVCE*SM 509
            RS+   + A++ C+ SM
Sbjct: 61  SRSKTLHDRAVINCQYSM 78

[45][TOP]
>UniRef100_Q975G8 Probable exosome complex exonuclease 1 n=1 Tax=Sulfolobus tokodaii
           RepID=ECX1_SULTO
          Length = 247

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 34/45 (75%), Positives = 39/45 (86%)
 Frame = +3

Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443
           GLRLDGR+P E+R I  +L VL NADGSAIFEMGNTKV+AAV+GP
Sbjct: 18  GLRLDGRKPDEMRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGP 62

[46][TOP]
>UniRef100_UPI00005EC0D3 PREDICTED: similar to Chain G, Structure Of The Human Rna Exosome
           Composed Of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42,
           Csl4, Rrp4, And Rrp40 n=1 Tax=Monodelphis domestica
           RepID=UPI00005EC0D3
          Length = 245

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
           ++ +E +S +G R+DGRR  ELR+I  ++ V + ADGSA  E GNTK LA V+GPH +  
Sbjct: 1   MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEMRG 60

Query: 456 RRSELREEGALVVCE*SM 509
            RS    + ALV C+ SM
Sbjct: 61  SRSRALPDRALVNCQYSM 78

[47][TOP]
>UniRef100_C1BWS7 Exosome complex exonuclease RRP41 n=1 Tax=Esox lucius
           RepID=C1BWS7_ESOLU
          Length = 245

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV-T 455
           ++ +E +S +G RLDGR+  ELR++  ++ V + ADGSA  E GNTK LA V+GPH V  
Sbjct: 1   MAGVELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVRM 60

Query: 456 RRSELREEGALVVCE*SM 509
            RS+   + A++ C+ SM
Sbjct: 61  SRSKTLHDRAVINCQYSM 78

[48][TOP]
>UniRef100_Q5PQ94 LOC495942 protein n=1 Tax=Xenopus laevis RepID=Q5PQ94_XENLA
          Length = 249

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
           ++ ME +S +G R+DGR+  ELR+I  ++ V + ADGSA  E GNTK LA V+GPH +  
Sbjct: 1   MAGMELLSDQGYRVDGRKAGELRKIRARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60

Query: 456 RRSELREEGALVVCE*SM 509
            RS++  +  ++ C+ SM
Sbjct: 61  SRSKMLHDRCVINCQYSM 78

[49][TOP]
>UniRef100_UPI00005A29C7 PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
           RNA processing protein 41) (Exosome component 4) (p12A)
           isoform 4 n=1 Tax=Canis lupus familiaris
           RepID=UPI00005A29C7
          Length = 244

 Score = 70.9 bits (172), Expect = 5e-11
 Identities = 34/74 (45%), Positives = 47/74 (63%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
           ++ +E +S +G R+DGRR  ELR+I  ++ V + ADGSA  E GNTK LA V+GPH    
Sbjct: 1   MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEARG 60

Query: 459 RSELREEGALVVCE 500
              L +  ALV C+
Sbjct: 61  VRTLTQRKALVNCQ 74

[50][TOP]
>UniRef100_UPI00001CFD4D exosome component 4 n=1 Tax=Rattus norvegicus RepID=UPI00001CFD4D
          Length = 245

 Score = 70.9 bits (172), Expect = 5e-11
 Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
           ++ +E +S +G R+DGRR  ELR+I  ++ V + ADGSA  E GNTK LA V+GPH +  
Sbjct: 1   MAGLELLSDQGYRIDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60

Query: 456 RRSELREEGALVVCE 500
            RS    + ALV C+
Sbjct: 61  SRSRALPDRALVNCQ 75

[51][TOP]
>UniRef100_Q28H58 Exosome component 4 n=1 Tax=Xenopus (Silurana) tropicalis
           RepID=Q28H58_XENTR
          Length = 249

 Score = 70.9 bits (172), Expect = 5e-11
 Identities = 34/78 (43%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
           ++ +E +S +G R+DGR+  ELR+I  ++ V + ADGSA  E GNTK LA V+GPH +  
Sbjct: 1   MAGLELLSDQGYRVDGRKAGELRKIRARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60

Query: 456 RRSELREEGALVVCE*SM 509
            RS++  + ++V C+ SM
Sbjct: 61  SRSKMLHDRSVVNCQYSM 78

[52][TOP]
>UniRef100_Q921I9 Exosome complex exonuclease RRP41 n=2 Tax=Mus musculus
           RepID=EXOS4_MOUSE
          Length = 245

 Score = 70.9 bits (172), Expect = 5e-11
 Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
           ++ +E +S +G R+DGRR  ELR+I  ++ V + ADGSA  E GNTK LA V+GPH +  
Sbjct: 1   MAGLELLSDQGYRIDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60

Query: 456 RRSELREEGALVVCE 500
            RS    + ALV C+
Sbjct: 61  SRSRALPDRALVNCQ 75

[53][TOP]
>UniRef100_UPI0001758632 PREDICTED: similar to exosome complex exonuclease RRP41, putative
           n=1 Tax=Tribolium castaneum RepID=UPI0001758632
          Length = 249

 Score = 70.5 bits (171), Expect = 6e-11
 Identities = 39/73 (53%), Positives = 49/73 (67%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
           E +S  GLR DGRR  ELRRI C+L V +  DGSA  E G TKVLAAV+GPH V   ++ 
Sbjct: 6   ELLSKIGLRQDGRRADELRRIRCKLGVFTEPDGSAYLEQGLTKVLAAVYGPHQV-GFAKA 64

Query: 471 REEGALVVCE*SM 509
           + + A+V C+ SM
Sbjct: 65  QHDSAVVNCQFSM 77

[54][TOP]
>UniRef100_Q6K293 Putative exosome component 4 n=1 Tax=Oryza sativa Japonica Group
           RepID=Q6K293_ORYSJ
          Length = 245

 Score = 70.5 bits (171), Expect = 6e-11
 Identities = 32/56 (57%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
 Frame = +3

Query: 288 MEFVSP-EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV 452
           ME+V+P  G R+DGRRP E+R++  ++ V++ ADGSA+FEMGNT+V+AAV+GP  V
Sbjct: 1   MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREV 56

[55][TOP]
>UniRef100_A4ID90 Exosome complex exonuclease RRP41, putative n=1 Tax=Leishmania
           infantum RepID=A4ID90_LEIIN
          Length = 246

 Score = 70.1 bits (170), Expect = 8e-11
 Identities = 34/70 (48%), Positives = 42/70 (60%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
           E+VSP GLRLDGRRP E RR++     LS  DGS    +G +KV A VFGP     + E 
Sbjct: 6   EYVSPAGLRLDGRRPLEARRMDIAFSTLSACDGSCDITLGQSKVCACVFGPRESLHKQEA 65

Query: 471 REEGALVVCE 500
           + +  LV CE
Sbjct: 66  KHDKGLVTCE 75

[56][TOP]
>UniRef100_Q4Q1B7 Exosome complex exonuclease RRP41, putative n=1 Tax=Leishmania
           major RepID=Q4Q1B7_LEIMA
          Length = 246

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 34/70 (48%), Positives = 42/70 (60%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
           E+VSP GLRLDGRRP E RR++     LS  DGS    +G +KV A VFGP     + E 
Sbjct: 6   EYVSPAGLRLDGRRPLEARRMDIAFGTLSACDGSCDITLGQSKVCACVFGPRESLHKQEA 65

Query: 471 REEGALVVCE 500
           + +  LV CE
Sbjct: 66  KHDKGLVTCE 75

[57][TOP]
>UniRef100_C1BN11 Exosome complex exonuclease RRP41 n=1 Tax=Caligus rogercresseyi
           RepID=C1BN11_9MAXI
          Length = 246

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLS-NADGSAIFEMGNTKVLAAVFGP 443
           ME +S +GLRLDGR+  ELRR+ C+L   S +ADGSA  EMGNTKVLAAV+GP
Sbjct: 1   MELLSDQGLRLDGRKSDELRRLRCRLGAFSWSADGSAYLEMGNTKVLAAVYGP 53

[58][TOP]
>UniRef100_C3N5R3 Exosome complex exonuclease 1 n=1 Tax=Sulfolobus islandicus M.16.27
           RepID=C3N5R3_SULIA
          Length = 245

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 32/51 (62%), Positives = 40/51 (78%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443
           + +  +G R+DGR+P ELR I  +L VL NADGSAIFEMGNTK +AAV+GP
Sbjct: 8   KLILEDGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGP 58

[59][TOP]
>UniRef100_C3MVG4 Exosome complex exonuclease 1 n=2 Tax=Sulfolobus islandicus
           RepID=C3MVG4_SULIM
          Length = 245

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 32/51 (62%), Positives = 40/51 (78%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443
           + +  +G R+DGR+P ELR I  +L VL NADGSAIFEMGNTK +AAV+GP
Sbjct: 8   KLILEDGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGP 58

[60][TOP]
>UniRef100_C3MQ46 Exosome complex exonuclease 1 n=3 Tax=Sulfolobus islandicus
           RepID=C3MQ46_SULIL
          Length = 245

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 32/51 (62%), Positives = 40/51 (78%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443
           + +  +G R+DGR+P ELR I  +L VL NADGSAIFEMGNTK +AAV+GP
Sbjct: 8   KLILEDGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGP 58

[61][TOP]
>UniRef100_UPI00017968DC PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
           RNA-processing protein 41) (Exosome component 4) (p12A)
           n=1 Tax=Equus caballus RepID=UPI00017968DC
          Length = 245

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
           ++ +E +S +G R+DGRR  ELR+I  ++ V + ADGSA  E GNTK LA V+GPH +  
Sbjct: 1   MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60

Query: 456 RRSELREEGALVVCE 500
            R+    + ALV C+
Sbjct: 61  SRARALPDRALVNCQ 75

[62][TOP]
>UniRef100_UPI00004A57C5 PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
           RNA processing protein 41) (Exosome component 4) (p12A)
           isoform 1 n=1 Tax=Canis lupus familiaris
           RepID=UPI00004A57C5
          Length = 245

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
           ++ +E +S +G R+DGRR  ELR+I  ++ V + ADGSA  E GNTK LA V+GPH +  
Sbjct: 1   MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60

Query: 456 RRSELREEGALVVCE 500
            R+    + ALV C+
Sbjct: 61  SRARALPDRALVNCQ 75

[63][TOP]
>UniRef100_A5E3M3 Exosome complex exonuclease RRP41 n=1 Tax=Lodderomyces elongisporus
           RepID=A5E3M3_LODEL
          Length = 244

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455
           +S ME  SPEGLR+DGRR  ELRR  C+++   N +DGS+  E GNTKV+  V GP   T
Sbjct: 1   MSRMELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVICTVIGPMEPT 60

Query: 456 RRSELREEGALV 491
            R+++ ++ A V
Sbjct: 61  SRAQMNQDRANV 72

[64][TOP]
>UniRef100_Q9NPD3 Exosome complex exonuclease RRP41 n=1 Tax=Homo sapiens
           RepID=EXOS4_HUMAN
          Length = 245

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
           ++ +E +S +G R+DGRR  ELR+I  ++ V + ADGSA  E GNTK LA V+GPH +  
Sbjct: 1   MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60

Query: 456 RRSELREEGALVVCE 500
            R+    + ALV C+
Sbjct: 61  SRARALPDRALVNCQ 75

[65][TOP]
>UniRef100_Q7YRA3 Exosome complex exonuclease RRP41 n=1 Tax=Bos taurus
           RepID=EXOS4_BOVIN
          Length = 245

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
           ++ +E +S +G R+DGRR  ELR+I  ++ V + ADGSA  E GNTK LA V+GPH +  
Sbjct: 1   MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60

Query: 456 RRSELREEGALVVCE 500
            R+    + ALV C+
Sbjct: 61  SRARALPDRALVNCQ 75

[66][TOP]
>UniRef100_A4HPG8 Exosome complex exonuclease RRP41, putative n=1 Tax=Leishmania
           braziliensis RepID=A4HPG8_LEIBR
          Length = 246

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 33/70 (47%), Positives = 43/70 (61%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
           E+VSP GLRLDGRRP E RR++     LS  DGS    +G +KV A++FGP     + E 
Sbjct: 6   EYVSPAGLRLDGRRPLEARRMDIVFGTLSACDGSCDITVGQSKVCASIFGPRESLHKQEA 65

Query: 471 REEGALVVCE 500
           + +  LV CE
Sbjct: 66  KHDKVLVTCE 75

[67][TOP]
>UniRef100_Q9UXC2 Probable exosome complex exonuclease 1 n=2 Tax=Sulfolobus
           solfataricus RepID=ECX1_SULSO
          Length = 248

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 32/51 (62%), Positives = 39/51 (76%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443
           + +  +G R DGR+P ELR I  +L VL NADGSAIFEMGNTK +AAV+GP
Sbjct: 11  KLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGP 61

[68][TOP]
>UniRef100_Q4SLK0 Chromosome 15 SCAF14556, whole genome shotgun sequence n=1
           Tax=Tetraodon nigroviridis RepID=Q4SLK0_TETNG
          Length = 291

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 16/93 (17%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
           ++ +E +S +G R+DGR+  ELR+I  ++ V + ADGSA  E GNTK LA V+GPH V  
Sbjct: 1   MAGLELLSDQGYRIDGRKATELRKIQARMGVFAQADGSAYLEQGNTKALAVVYGPHEVCV 60

Query: 456 ---------------RRSELREEGALVVCE*SM 509
                           RS  R + A++ C+ SM
Sbjct: 61  CVCVCVCVCVCQMRGSRSRARHDRAVINCQYSM 93

[69][TOP]
>UniRef100_C4YA81 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
           42720 RepID=C4YA81_CLAL4
          Length = 244

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455
           +S ME  SPEGLR+DGRR  ELRR  C+++  +N ADGS+  E GNTKV+  V GP   +
Sbjct: 1   MSRMELYSPEGLRVDGRRWNELRRFECKINTHANSADGSSYIEQGNTKVMCMVHGPKEPS 60

Query: 456 RRSELREEGALV 491
            RS+  +  A +
Sbjct: 61  LRSQSNQNRATI 72

[70][TOP]
>UniRef100_C4M2G1 3' exoribonuclease family protein n=1 Tax=Entamoeba histolytica
           HM-1:IMSS RepID=C4M2G1_ENTHI
          Length = 238

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 37/69 (53%), Positives = 46/69 (66%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           ME++SPEG RLDGRR  E+R+   +++ LS ADGSA   MGNT V A VFGP    RR+ 
Sbjct: 1   MEYISPEGYRLDGRRTTEMRKCEMEINFLSTADGSARVRMGNTIVEAVVFGPLEGRRRN- 59

Query: 468 LREEGALVV 494
            RE   L+V
Sbjct: 60  -REGAELMV 67

[71][TOP]
>UniRef100_A8WQQ5 Putative exosome complex exonuclease RRP41 n=2 Tax=Caenorhabditis
           briggsae RepID=EXOS4_CAEBR
          Length = 240

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 32/71 (45%), Positives = 47/71 (66%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           M  +S  G R+DGRRP ++R IN +L +  NA+GS   E GNTKVL AV+GP+  ++ S+
Sbjct: 1   MSIISEHGFRMDGRRPAQIRNINTRLGLNRNAEGSCYLEHGNTKVLCAVYGPYE-SKASK 59

Query: 468 LREEGALVVCE 500
             E+   +VC+
Sbjct: 60  RLEDRCAIVCQ 70

[72][TOP]
>UniRef100_Q4JB27 Probable exosome complex exonuclease 1 n=1 Tax=Sulfolobus
           acidocaldarius RepID=ECX1_SULAC
          Length = 243

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 33/51 (64%), Positives = 39/51 (76%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443
           + +   GLR DGR+  ELR I  +L VL NADGSAIFEMGNTKV+AAV+GP
Sbjct: 8   KLILENGLRTDGRKLDELRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGP 58

[73][TOP]
>UniRef100_Q5BZN7 SJCHGC06185 protein (Fragment) n=1 Tax=Schistosoma japonicum
           RepID=Q5BZN7_SCHJA
          Length = 251

 Score = 67.0 bits (162), Expect = 7e-10
 Identities = 30/64 (46%), Positives = 42/64 (65%)
 Frame = +3

Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGAL 488
           G R+DGRRP ELRR++CQ     N+DG      GNTKV+A+V GPHA   + +   +GA 
Sbjct: 1   GRRVDGRRPNELRRVHCQFGS-GNSDGIVFLHQGNTKVIASVVGPHAPRTKGDGNPDGAT 59

Query: 489 VVCE 500
           ++C+
Sbjct: 60  IICQ 63

[74][TOP]
>UniRef100_UPI00005A29C8 PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
           RNA processing protein 41) (Exosome component 4) (p12A)
           isoform 5 n=1 Tax=Canis lupus familiaris
           RepID=UPI00005A29C8
          Length = 238

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 34/74 (45%), Positives = 46/74 (62%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
           ++ +E +S +G R+DGRR  ELR+I  ++ V + ADGSA  E GNTK LA V+GPH    
Sbjct: 1   MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPH---- 56

Query: 459 RSELREEGALVVCE 500
             E     ALV C+
Sbjct: 57  --EASGHRALVNCQ 68

[75][TOP]
>UniRef100_A3DMU9 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Staphylothermus
           marinus F1 RepID=A3DMU9_STAMF
          Length = 240

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 34/67 (50%), Positives = 42/67 (62%)
 Frame = +3

Query: 297 VSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 476
           +  +GLR DGR+P ELR I   + VL NADGSA  E G TKV+AAV+GP  V  R     
Sbjct: 7   IREDGLRHDGRKPNELRPIKMDVGVLKNADGSAYVEYGGTKVIAAVYGPREVYPRHLALP 66

Query: 477 EGALVVC 497
           + AL+ C
Sbjct: 67  DRALIRC 73

[76][TOP]
>UniRef100_Q17533 Putative exosome complex exonuclease RRP41 n=1 Tax=Caenorhabditis
           elegans RepID=EXOS4_CAEEL
          Length = 240

 Score = 65.9 bits (159), Expect = 2e-09
 Identities = 32/71 (45%), Positives = 46/71 (64%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           M  +S  G R+DGRRP ++R IN +L +  NA+GS   E GNTKVL AV+GP+   + S+
Sbjct: 1   MNIISEHGFRIDGRRPAQIRNINTRLGLNRNAEGSCYLEHGNTKVLCAVYGPYE-GKSSK 59

Query: 468 LREEGALVVCE 500
             E+   +VC+
Sbjct: 60  RIEDKCAIVCQ 70

[77][TOP]
>UniRef100_B9WFQ9 Exosome complex exonuclease, putative (Ribosomal rna processing
           protein, putative) (3'-to-5' phosphorolytic
           exoribonuclease, putative) n=1 Tax=Candida dubliniensis
           CD36 RepID=B9WFQ9_CANDC
          Length = 240

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVTRRS 464
           ME  SPEGLR+DGRR  ELRR  C+++   N +DGS+  E GNTKV+  V GP   T RS
Sbjct: 1   MELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVMCTVQGPIEPTLRS 60

Query: 465 ELREEGA 485
           +   E A
Sbjct: 61  QQHSERA 67

[78][TOP]
>UniRef100_B0ERA1 Exosome complex exonuclease RRP41, putative n=1 Tax=Entamoeba
           dispar SAW760 RepID=B0ERA1_ENTDI
          Length = 238

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 35/69 (50%), Positives = 46/69 (66%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           ME++SPEG RLDGRR  E+R+   +++ L+ +DGSA   MGNT V A VFGP    RR+ 
Sbjct: 1   MEYISPEGYRLDGRRTTEMRKCEMEINFLNTSDGSARVRMGNTIVEAVVFGPLEGRRRN- 59

Query: 468 LREEGALVV 494
            RE   L+V
Sbjct: 60  -REGAELMV 67

[79][TOP]
>UniRef100_Q12ZB7 Archaeal exosome complex RNA-binding protein n=1
           Tax=Methanococcoides burtonii DSM 6242
           RepID=Q12ZB7_METBU
          Length = 343

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 34/68 (50%), Positives = 43/68 (63%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           ++F+   GLRLDGRR  E+R +  ++ VLS ADGS   E GN KVLAAV+GP  +  R  
Sbjct: 6   VKFIDENGLRLDGRRVDEIRPMTVEMGVLSRADGSCYLEWGNNKVLAAVYGPRELHPRRL 65

Query: 468 LREEGALV 491
            R   ALV
Sbjct: 66  QRPSEALV 73

[80][TOP]
>UniRef100_A4YCV2 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Metallosphaera
           sedula DSM 5348 RepID=A4YCV2_METS5
          Length = 245

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 29/61 (47%), Positives = 43/61 (70%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
           +   + +  +G RLDGRRP ELR +  ++ VL NADGS++ E+GNTK++AAV+GP  +  
Sbjct: 4   VQKPKLILDDGRRLDGRRPDELRPMKMEIGVLKNADGSSLVEVGNTKIIAAVYGPREMHP 63

Query: 459 R 461
           R
Sbjct: 64  R 64

[81][TOP]
>UniRef100_A1RXQ6 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Thermofilum
           pendens Hrk 5 RepID=A1RXQ6_THEPD
          Length = 245

 Score = 65.1 bits (157), Expect = 3e-09
 Identities = 33/71 (46%), Positives = 43/71 (60%)
 Frame = +3

Query: 297 VSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 476
           +   G R+DGR P E+R +  +  VL NADGSA  E+GN KVLAAV+GP     R E   
Sbjct: 10  IDENGRRVDGRLPDEMRPLRVEAGVLKNADGSAYVELGNNKVLAAVYGPREPMPRHEALP 69

Query: 477 EGALVVCE*SM 509
           + A++ C  SM
Sbjct: 70  DRAILKCRYSM 80

[82][TOP]
>UniRef100_Q6BHJ0 DEHA2G18194p n=2 Tax=Debaryomyces hansenii RepID=Q6BHJ0_DEBHA
          Length = 245

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDV-LSNADGSAIFEMGNTKVLAAVFGPHAVT 455
           +S ME  SPEGLR+DGRR  ELRR  C+++   S++DGS+  E GNTK++  V GP   +
Sbjct: 1   MSRMELYSPEGLRIDGRRWNELRRFECRINTHPSSSDGSSYIEQGNTKIICMVQGPMEPS 60

Query: 456 RRSELREEGALV 491
            RS+     A +
Sbjct: 61  LRSQTNSSKASI 72

[83][TOP]
>UniRef100_C5DCB7 KLTH0B01738p n=1 Tax=Lachancea thermotolerans CBS 6340
           RepID=C5DCB7_LACTC
          Length = 245

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNA-DGSAIFEMGNTKVLAAVFGPHAVT 455
           +S +E  SPEGLR+DGRR  ELRR+ C ++  +NA DGS+  E GN KV+  V GP    
Sbjct: 1   MSRLEIYSPEGLRVDGRRWNELRRLECSINTHANASDGSSYLEQGNNKVITLVTGPQEPK 60

Query: 456 RRSELREEGALV 491
            RS++    A +
Sbjct: 61  LRSQMNVTKATI 72

[84][TOP]
>UniRef100_C4R4E4 3'-to-5' phosphorolytic exoribonuclease that is a subunit of the
           exosome n=1 Tax=Pichia pastoris GS115 RepID=C4R4E4_PICPG
          Length = 246

 Score = 63.9 bits (154), Expect = 6e-09
 Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLS-NADGSAIFEMGNTKVLAAVFGPHAVTRRS 464
           ME  SPEGLR+DGRR  ELRR  C+++     ADGSA  E GNTK++  + GPH  TR  
Sbjct: 1   MELYSPEGLRVDGRRWNELRRFYCRINTHPIVADGSAYVEAGNTKIVCLLNGPHEPTRSQ 60

Query: 465 ELREEGAL 488
              ++G+L
Sbjct: 61  MNTQKGSL 68

[85][TOP]
>UniRef100_UPI00015B5B6C PREDICTED: similar to ENSANGP00000009222 n=1 Tax=Nasonia
           vitripennis RepID=UPI00015B5B6C
          Length = 270

 Score = 63.5 bits (153), Expect = 8e-09
 Identities = 30/49 (61%), Positives = 34/49 (69%)
 Frame = +3

Query: 300 SPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
           S  GLR DGRRP ELRRI  ++ V   ADGSA  E G TK+LA V+GPH
Sbjct: 8   SQGGLRADGRRPLELRRIRLRMGVFGQADGSAYLEQGKTKILATVYGPH 56

[86][TOP]
>UniRef100_Q5AMR4 Likely exosome component Ski6p n=1 Tax=Candida albicans
           RepID=Q5AMR4_CANAL
          Length = 240

 Score = 63.5 bits (153), Expect = 8e-09
 Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVTRRS 464
           ME  SPEGLR+DGRR  ELRR  C+++   N +DGS+  E GNTKV+  V GP     RS
Sbjct: 1   MELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVMCTVQGPIEPALRS 60

Query: 465 ELREEGA 485
           +   E A
Sbjct: 61  QQHSERA 67

[87][TOP]
>UniRef100_C4YHN7 Exosome complex exonuclease RRP41 n=1 Tax=Candida albicans
           RepID=C4YHN7_CANAL
          Length = 240

 Score = 63.5 bits (153), Expect = 8e-09
 Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVTRRS 464
           ME  SPEGLR+DGRR  ELRR  C+++   N +DGS+  E GNTKV+  V GP     RS
Sbjct: 1   MELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVMCTVQGPIEPALRS 60

Query: 465 ELREEGA 485
           +   E A
Sbjct: 61  QQHSERA 67

[88][TOP]
>UniRef100_B8D6B9 Probable exosome complex exonuclease 1 n=1 Tax=Desulfurococcus
           kamchatkensis 1221n RepID=B8D6B9_DESK1
          Length = 242

 Score = 63.5 bits (153), Expect = 8e-09
 Identities = 29/46 (63%), Positives = 36/46 (78%)
 Frame = +3

Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443
           +GLR+DGR+P ELR +   L VL NA+GSA+ E GNTK LAAV+GP
Sbjct: 10  DGLRIDGRKPEELRPVRIALGVLKNANGSALVEYGNTKALAAVYGP 55

[89][TOP]
>UniRef100_Q8TYC1 Probable exosome complex exonuclease 1 n=1 Tax=Methanopyrus
           kandleri RepID=ECX1_METKA
          Length = 239

 Score = 63.5 bits (153), Expect = 8e-09
 Identities = 30/65 (46%), Positives = 44/65 (67%)
 Frame = +3

Query: 297 VSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 476
           +S +GLRLDGR+P E+R +  Q  VL  ADGSA  E+G  K++AAV+GP  +  R + + 
Sbjct: 9   ISEDGLRLDGRKPDEMRPLKIQAGVLKRADGSAYLELGANKIVAAVYGPRELHPRHKQKP 68

Query: 477 EGALV 491
           + A+V
Sbjct: 69  DRAVV 73

[90][TOP]
>UniRef100_UPI0000DB6F09 PREDICTED: similar to putative exosome complex exonuclease RRP41
           n=1 Tax=Apis mellifera RepID=UPI0000DB6F09
          Length = 268

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
 Frame = +3

Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHA---VTRRSELREE 479
           GLRLDGRR  ELR+I  ++ V   ADGSA  E GNTK+L  V+GPH     T RS  +  
Sbjct: 12  GLRLDGRRALELRQIRIKMGVFGQADGSAYIEHGNTKILVTVYGPHQPRNSTGRSTSKIT 71

Query: 480 GALVVCE*SM 509
             +V C+ SM
Sbjct: 72  KGIVNCQYSM 81

[91][TOP]
>UniRef100_B5IEJ8 Exosome complex exonuclease 1 n=1 Tax=Aciduliprofundum boonei T469
           RepID=B5IEJ8_9EURY
          Length = 243

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 31/76 (40%), Positives = 44/76 (57%)
 Frame = +3

Query: 282 SSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461
           S ++ +   GLR+DGR P +LR I  ++ VL  ADGSA  E G  K++AAV+GPH    +
Sbjct: 3   SDIKLIDDNGLRIDGRLPNQLRPIKMEVGVLKRADGSAFIEWGGNKIIAAVYGPHEAYPK 62

Query: 462 SELREEGALVVCE*SM 509
                + A+V    SM
Sbjct: 63  HVQEADRAIVRARYSM 78

[92][TOP]
>UniRef100_Q6CRE8 KLLA0D09625p n=1 Tax=Kluyveromyces lactis RepID=Q6CRE8_KLULA
          Length = 245

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455
           +S  E  SPEGLR+DGRR  ELR  NC ++   N ADGS+  E GN K++  V GP   +
Sbjct: 1   MSRFEIYSPEGLRVDGRRWNELRSFNCSINTHPNAADGSSYLEQGNNKIITLVAGPQEPS 60

Query: 456 RRSELREEGA 485
            RS++  + A
Sbjct: 61  SRSQVNTKQA 70

[93][TOP]
>UniRef100_C5M243 Exosome complex exonuclease RRP41 n=1 Tax=Candida tropicalis
           MYA-3404 RepID=C5M243_CANTT
          Length = 240

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVTRRS 464
           ME  SPEGLR+DGRR  ELRR  C+++   N +DGS+  E GNTKV+  V GP     RS
Sbjct: 1   MELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVVCTVQGPIEPQLRS 60

Query: 465 ELREEGA 485
           +   E A
Sbjct: 61  QQHSEHA 67

[94][TOP]
>UniRef100_C5E0D5 ZYRO0G11814p n=1 Tax=Zygosaccharomyces rouxii CBS 732
           RepID=C5E0D5_ZYGRC
          Length = 245

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455
           +S  E  SPEGLR+DGRR  ELRR +C ++  S+ ADGS+  E GN K++  V GP   +
Sbjct: 1   MSRFEIYSPEGLRVDGRRWNELRRFDCSINTHSHAADGSSYLEQGNNKIITLVKGPKEPS 60

Query: 456 RRSELREEGALV 491
            RS++    AL+
Sbjct: 61  LRSQMDPTKALL 72

[95][TOP]
>UniRef100_Q4DGF6 Exosome complex exonuclease RRP41A, putative (Fragment) n=1
           Tax=Trypanosoma cruzi RepID=Q4DGF6_TRYCR
          Length = 195

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 29/70 (41%), Positives = 40/70 (57%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
           E++SP GLRLDGRRP+E RR+  +   +   DG      G   V A+V+GP  VT R E 
Sbjct: 6   EYISPAGLRLDGRRPQESRRMTLEFGKVLGCDGCCTVMSGLATVCASVYGPREVTNRLES 65

Query: 471 REEGALVVCE 500
           +    ++ CE
Sbjct: 66  KYNECIITCE 75

[96][TOP]
>UniRef100_C5A2B9 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus
           gammatolerans EJ3 RepID=ECX1_THEGJ
          Length = 249

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 29/68 (42%), Positives = 44/68 (64%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           ++ +   G R+DGRR  ELR+I+ ++ VL NADGSA  E G  K+LAAV+GP  +  +  
Sbjct: 8   LKLIDENGRRIDGRRKYELRKIHMEVGVLKNADGSAYIEWGKNKILAAVYGPREIHPKHL 67

Query: 468 LREEGALV 491
            R + A++
Sbjct: 68  QRPDTAVL 75

[97][TOP]
>UniRef100_Q75C81 ACR035Wp n=1 Tax=Eremothecium gossypii RepID=Q75C81_ASHGO
          Length = 246

 Score = 61.2 bits (147), Expect = 4e-08
 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDV-LSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           E  SPEGLRLDGRR  ELRR  C ++   + ADGS+  E GN K++  V GPH    RS+
Sbjct: 5   EIYSPEGLRLDGRRWNELRRFECSINTHPTAADGSSYLEQGNNKLITLVTGPHEPALRSQ 64

Query: 468 LREEGA 485
           +    A
Sbjct: 65  VNPSKA 70

[98][TOP]
>UniRef100_A7TII5 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
           DSM 70294 RepID=A7TII5_VANPO
          Length = 246

 Score = 61.2 bits (147), Expect = 4e-08
 Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNA-DGSAIFEMGNTKVLAAVFGPHAVT 455
           +S  E  SPEGLRLDGRR  ELRR  C ++  ++A DGS+  E GN K++  V GP    
Sbjct: 1   MSRFELYSPEGLRLDGRRWNELRRFECSINTHAHASDGSSYLEQGNNKIVTLVKGPQEPI 60

Query: 456 RRSEL 470
            RS+L
Sbjct: 61  LRSQL 65

[99][TOP]
>UniRef100_C5KIM5 Exosome complex exonuclease RRP41, putative n=1 Tax=Perkinsus
           marinus ATCC 50983 RepID=C5KIM5_9ALVE
          Length = 248

 Score = 60.8 bits (146), Expect = 5e-08
 Identities = 31/66 (46%), Positives = 41/66 (62%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
           EF++ EG RLDGRRP ELR +  ++    +ADGSA  + G TKV+A VFGP  +   S  
Sbjct: 6   EFLTYEGFRLDGRRPNELRHLTLKIGDAPSADGSATLQQGLTKVVAHVFGPRPLQAASVG 65

Query: 471 REEGAL 488
           R  G +
Sbjct: 66  RAAGTM 71

[100][TOP]
>UniRef100_C4Q0C5 Ribonuclease pH related n=1 Tax=Schistosoma mansoni
           RepID=C4Q0C5_SCHMA
          Length = 258

 Score = 60.8 bits (146), Expect = 5e-08
 Identities = 28/64 (43%), Positives = 40/64 (62%)
 Frame = +3

Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGAL 488
           G R+DGRRP E+RR++CQ      +DG      GNTKV+A+V GPHA   + +   +GA 
Sbjct: 8   GRRVDGRRPNEIRRVDCQFGS-GYSDGIVFLHQGNTKVIASVVGPHAPRVKGDGTPDGAT 66

Query: 489 VVCE 500
           + C+
Sbjct: 67  ITCQ 70

[101][TOP]
>UniRef100_A7RQ94 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RQ94_NEMVE
          Length = 268

 Score = 60.8 bits (146), Expect = 5e-08
 Identities = 32/68 (47%), Positives = 41/68 (60%)
 Frame = +3

Query: 297 VSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 476
           +  +G R DGRRP ELR +  +  V+S A GSA  EM NTKV+ A++GP    RR E   
Sbjct: 30  IRKDGCRQDGRRPDELRPMFLRAGVVSQAKGSAYIEMKNTKVICAIYGPREAPRRQEFSM 89

Query: 477 EGALVVCE 500
           +G L  CE
Sbjct: 90  KGRL-TCE 96

[102][TOP]
>UniRef100_Q4DZV2 Ribosomal RNA processing protein 41A, putative n=1 Tax=Trypanosoma
           cruzi RepID=Q4DZV2_TRYCR
          Length = 252

 Score = 60.5 bits (145), Expect = 6e-08
 Identities = 28/70 (40%), Positives = 40/70 (57%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
           E+++P GLRLDGRRP+E RR+  +   +   DG      G   V A+V+GP  VT R E 
Sbjct: 6   EYINPAGLRLDGRRPQESRRMTLEFGKVLGCDGCCTVMSGLATVCASVYGPREVTNRLES 65

Query: 471 REEGALVVCE 500
           +    ++ CE
Sbjct: 66  KYNECIITCE 75

[103][TOP]
>UniRef100_C7DI01 3' exoribonuclease n=1 Tax=Candidatus Micrarchaeum acidiphilum
           ARMAN-2 RepID=C7DI01_9EURY
          Length = 246

 Score = 60.5 bits (145), Expect = 6e-08
 Identities = 32/68 (47%), Positives = 41/68 (60%)
 Frame = +3

Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGA 485
           +G RLDGR   ELR +  +  +L+NA+GSA  E GN KVLAAV+GP   T R       A
Sbjct: 13  DGKRLDGRDFNELRPLKIEAGILANANGSAYLEWGNNKVLAAVYGPKEATPRHLADTNKA 72

Query: 486 LVVCE*SM 509
           ++ C  SM
Sbjct: 73  IIKCRYSM 80

[104][TOP]
>UniRef100_B7R2K9 Exosome complex exonuclease 1 n=1 Tax=Thermococcus sp. AM4
           RepID=B7R2K9_9EURY
          Length = 248

 Score = 60.5 bits (145), Expect = 6e-08
 Identities = 28/68 (41%), Positives = 44/68 (64%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           ++ +   G R+DGR+  ELR+I+ ++ VL NADGSA  E G  K+LAAV+GP  +  +  
Sbjct: 7   LKLIDENGRRIDGRKKYELRKIHMEVGVLKNADGSAYIEWGKNKILAAVYGPREIHPKHL 66

Query: 468 LREEGALV 491
            R + A++
Sbjct: 67  QRPDTAVL 74

[105][TOP]
>UniRef100_A5DGL1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
           RepID=A5DGL1_PICGU
          Length = 242

 Score = 60.1 bits (144), Expect = 8e-08
 Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNAD-GSAIFEMGNTKVLAAVFGPHAVT 455
           +S +E  SPEGLR+DGRR  ELRR  C+++   N+  GS+  E GNTKV+  V GP    
Sbjct: 1   MSRLELYSPEGLRVDGRRWNELRRFECKINTHPNSSTGSSYVEQGNTKVICMVEGPSEPE 60

Query: 456 RRSEL 470
            RS++
Sbjct: 61  TRSQV 65

[106][TOP]
>UniRef100_A3GGM6 Predicted protein n=1 Tax=Pichia stipitis RepID=A3GGM6_PICST
          Length = 241

 Score = 60.1 bits (144), Expect = 8e-08
 Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVTRRS 464
           ME  SPEGLR+DGRR  E+R   C+++   N +DGS+  E GNTKV+  V GP     RS
Sbjct: 1   MELYSPEGLRIDGRRWNEIRNFECRINTHPNSSDGSSYIEQGNTKVICVVQGPMEPALRS 60

Query: 465 ELREEGA 485
           +     A
Sbjct: 61  QANSNEA 67

[107][TOP]
>UniRef100_Q8PTT8 Probable exosome complex exonuclease 1 n=1 Tax=Methanosarcina mazei
           RepID=ECX1_METMA
          Length = 493

 Score = 60.1 bits (144), Expect = 8e-08
 Identities = 28/69 (40%), Positives = 41/69 (59%)
 Frame = +3

Query: 285 SMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRS 464
           ++  ++ +GLRLDGRR  E+R +  ++ VLS ADGS   E G  K+L  VFGP     R 
Sbjct: 7   NLTLITDDGLRLDGRRADEIRPMKIEVGVLSRADGSCYLEWGRNKILVGVFGPREAHPRR 66

Query: 465 ELREEGALV 491
             R + A++
Sbjct: 67  SQRADSAVI 75

[108][TOP]
>UniRef100_B1L6N7 Exosome complex exonuclease 1 n=1 Tax=Candidatus Korarchaeum
           cryptofilum OPF8 RepID=B1L6N7_KORCO
          Length = 248

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 29/65 (44%), Positives = 40/65 (61%)
 Frame = +3

Query: 297 VSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 476
           ++ EG+R DGR P E+R I   + VL  ADGSA  E G  ++LAAVFGP  V  +  +  
Sbjct: 13  ITEEGIRTDGRLPHEMRPIKMMVGVLEKADGSAFVEWGGNRILAAVFGPREVHPKHMVLP 72

Query: 477 EGALV 491
           + AL+
Sbjct: 73  DRALI 77

[109][TOP]
>UniRef100_A2BKC0 Probable exosome complex exonuclease 1 n=1 Tax=Hyperthermus
           butylicus DSM 5456 RepID=ECX1_HYPBU
          Length = 255

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 29/62 (46%), Positives = 40/62 (64%)
 Frame = +3

Query: 312 LRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGALV 491
           +R DGR P +LR I  ++ VLSNADGSA+ E G T+V+AAV+GP     R     + A++
Sbjct: 24  IRHDGRLPEQLRPIRMEVGVLSNADGSALVEYGGTRVIAAVYGPREAHPRHVALPDRAII 83

Query: 492 VC 497
            C
Sbjct: 84  RC 85

[110][TOP]
>UniRef100_UPI000151B3FA hypothetical protein PGUG_02412 n=1 Tax=Pichia guilliermondii ATCC
           6260 RepID=UPI000151B3FA
          Length = 242

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNA-DGSAIFEMGNTKVLAAVFGPHAVT 455
           +S +E  SPEGLR+DGRR  ELRR  C+++   N+  GS+  E GNTKV+  V GP    
Sbjct: 1   MSRLELYSPEGLRVDGRRWNELRRFECKINTHPNSLTGSSYVEQGNTKVICMVEGPLEPE 60

Query: 456 RRSEL 470
            RS++
Sbjct: 61  TRSQV 65

[111][TOP]
>UniRef100_Q5JIR6 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus
           kodakarensis RepID=ECX1_PYRKO
          Length = 249

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 29/68 (42%), Positives = 42/68 (61%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           ++ +   G R+DGR+  ELR I  ++ VL NADGSA  E G  KVLAAV+GP  +  +  
Sbjct: 8   LKLIDENGKRIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKVLAAVYGPREIHPKHL 67

Query: 468 LREEGALV 491
            R + A++
Sbjct: 68  QRPDRAIL 75

[112][TOP]
>UniRef100_B5IVS6 Exosome complex exonuclease 1 n=1 Tax=Thermococcus barophilus MP
           RepID=B5IVS6_9EURY
          Length = 247

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 28/68 (41%), Positives = 42/68 (61%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           ++ +   G R+DGR+  ELR I  ++ VL NADGSA  E G  K+LAAV+GP  +  +  
Sbjct: 8   IKLIDENGRRIDGRKKYELRPIKMEVGVLKNADGSAYIEWGKNKILAAVYGPREIHPKHL 67

Query: 468 LREEGALV 491
            R + A++
Sbjct: 68  QRPDRAIL 75

[113][TOP]
>UniRef100_B6YSI2 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus
           onnurineus NA1 RepID=ECX1_THEON
          Length = 249

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 28/68 (41%), Positives = 42/68 (61%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           ++ +   G R+DGR+  ELR I  ++ VL NADGSA  E G  K+LAAV+GP  +  +  
Sbjct: 8   LKLIDENGRRIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKILAAVYGPREIHPKHL 67

Query: 468 LREEGALV 491
            R + A++
Sbjct: 68  QRPDRAIL 75

[114][TOP]
>UniRef100_B9IKJ0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IKJ0_POPTR
          Length = 243

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 30/63 (47%), Positives = 42/63 (66%)
 Frame = +3

Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGA 485
           E  R DGR P +LR ++C  +VL  A GSA +  G+TKVLAAV+GP A T+++E  E+  
Sbjct: 2   ESDRDDGRSPSQLRPLSCARNVLHRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKAC 61

Query: 486 LVV 494
           + V
Sbjct: 62  IEV 64

[115][TOP]
>UniRef100_Q6FSM7 Strain CBS138 chromosome G complete sequence n=1 Tax=Candida
           glabrata RepID=Q6FSM7_CANGA
          Length = 246

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455
           +S +E  SPEGLRLDGRR  ELRR    ++   + ADGS+  E GN KV+  V GP   T
Sbjct: 1   MSRVEIYSPEGLRLDGRRWNELRRFESAINTHPHAADGSSYLEQGNNKVITLVKGPKEPT 60

Query: 456 RRSELREEGALV 491
            +S++  + A++
Sbjct: 61  LKSQMDIQKAIL 72

[116][TOP]
>UniRef100_Q2NEX5 Putative exosome complex, exonuclease 1 subunit n=1
           Tax=Methanosphaera stadtmanae DSM 3091
           RepID=Q2NEX5_METST
          Length = 232

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 27/68 (39%), Positives = 42/68 (61%)
 Frame = +3

Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGA 485
           E +R DGR    LR +  ++ VL+NADGSA  E GN K+L  V+GP  +  +   + +GA
Sbjct: 4   EFIRKDGRAYNTLRNMKMEVGVLNNADGSAYIECGNNKILVGVYGPREIHSKKHSKPDGA 63

Query: 486 LVVCE*SM 509
           ++ C+ +M
Sbjct: 64  VLRCKYNM 71

[117][TOP]
>UniRef100_A0B8W3 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Methanosaeta
           thermophila PT RepID=A0B8W3_METTP
          Length = 245

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 29/52 (55%), Positives = 36/52 (69%)
 Frame = +3

Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461
           +G+RLDGRR  ELR I  ++ VL  ADGS   EMG+ KV+AAV+GP  V  R
Sbjct: 9   DGIRLDGRRFDELRPIKMEVGVLKRADGSCYMEMGDNKVIAAVYGPREVHPR 60

[118][TOP]
>UniRef100_C8S7M6 Exosome complex exonuclease 1 n=1 Tax=Ferroglobus placidus DSM
           10642 RepID=C8S7M6_FERPL
          Length = 245

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 28/49 (57%), Positives = 33/49 (67%)
 Frame = +3

Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV 452
           +G R+DGR P ELR I  +  VL NADGS   EMG  KV+AAV+GP  V
Sbjct: 10  DGRRIDGRLPDELRPIKIEAGVLKNADGSCYLEMGKNKVMAAVYGPRKV 58

[119][TOP]
>UniRef100_O42872 Exosome complex component ski6 n=1 Tax=Schizosaccharomyces pombe
           RepID=RRP41_SCHPO
          Length = 242

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 31/74 (41%), Positives = 43/74 (58%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
           +S  E +S EGLR DGRR  E+R   C++ +  + +GSA  E+GNTKVL  V GP     
Sbjct: 1   MSHFEILSLEGLRNDGRRWDEMRNFQCRIGIEPSENGSAFIELGNTKVLCIVDGPSEPVI 60

Query: 459 RSELREEGALVVCE 500
           +S+ R +   V  E
Sbjct: 61  KSKARADRTFVNVE 74

[120][TOP]
>UniRef100_O29757 Probable exosome complex exonuclease 1 n=1 Tax=Archaeoglobus
           fulgidus RepID=ECX1_ARCFU
          Length = 258

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 30/52 (57%), Positives = 34/52 (65%)
 Frame = +3

Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461
           +GLRLDGR+  ELR I  +  VL  ADGS   EMG  KV+AAVFGP  V  R
Sbjct: 14  DGLRLDGRKFDELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPR 65

[121][TOP]
>UniRef100_Q01E66 Putative exonuclease RRP41 (ISS) n=1 Tax=Ostreococcus tauri
           RepID=Q01E66_OSTTA
          Length = 321

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 34/72 (47%), Positives = 43/72 (59%)
 Frame = +3

Query: 282 SSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461
           ++ME+VS EGLRLDGRR  E+RR      + +  DGSA FE+GNT +   V GP    R+
Sbjct: 50  ATMEYVSFEGLRLDGRRANEIRRPRHAFAIDAQCDGSARFELGNTVIECRVDGPS--ERK 107

Query: 462 SELREEGALVVC 497
               EEGA   C
Sbjct: 108 FGGAEEGASEAC 119

[122][TOP]
>UniRef100_Q469M3 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Methanosarcina
           barkeri str. Fusaro RepID=Q469M3_METBF
          Length = 501

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 28/67 (41%), Positives = 39/67 (58%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
           + ++ +GLRLDGR   E+R +  ++ VLS ADGS   E G  KVL  VFGP     R   
Sbjct: 7   KLITDDGLRLDGRHADEIRPMKIEIGVLSRADGSCYLEWGRNKVLVGVFGPREAHPRRSQ 66

Query: 471 REEGALV 491
           R + A++
Sbjct: 67  RADTAVI 73

[123][TOP]
>UniRef100_A0RXU1 Probable exosome complex exonuclease 1 n=1 Tax=Cenarchaeum
           symbiosum RepID=ECX1_CENSY
          Length = 243

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 28/76 (36%), Positives = 43/76 (56%)
 Frame = +3

Query: 270 GEHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHA 449
           G   + +  +   G+R DGR+  E RR+     VL+NA+GSA  E G+ K+LA +FGP  
Sbjct: 2   GGRDTDVVLLDENGIRCDGRKISETRRVEITAGVLNNANGSAYIEFGDNKILAGIFGPRD 61

Query: 450 VTRRSELREEGALVVC 497
           V  +  +R E  ++ C
Sbjct: 62  VHPKHMVRTETGILRC 77

[124][TOP]
>UniRef100_Q9YC03 Probable exosome complex exonuclease 1 n=1 Tax=Aeropyrum pernix
           RepID=ECX1_AERPE
          Length = 246

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 27/52 (51%), Positives = 36/52 (69%)
 Frame = +3

Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461
           +G R DGR P +LR +  Q+ +L NADGSA+ E G T+VLAAV+GP    +R
Sbjct: 14  DGRRHDGRLPEDLRPVRMQVGILHNADGSALVEFGRTRVLAAVYGPREPHQR 65

[125][TOP]
>UniRef100_Q38AL8 Exosome complex exonuclease RRP41A n=1 Tax=Trypanosoma brucei
           RepID=Q38AL8_9TRYP
          Length = 252

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 27/70 (38%), Positives = 39/70 (55%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
           E+++P GLRLDGRRP E RR+  +   +S  DG      G + V A V+GP  V+ R E 
Sbjct: 6   EYINPAGLRLDGRRPNEPRRLALEFGKISGCDGCCTVVSGLSHVCATVYGPREVSNRLEG 65

Query: 471 REEGALVVCE 500
           +     + C+
Sbjct: 66  KYNEVTITCD 75

[126][TOP]
>UniRef100_B2WKB1 Exosome complex exonuclease RRP41 n=1 Tax=Pyrenophora
           tritici-repentis Pt-1C-BFP RepID=B2WKB1_PYRTR
          Length = 250

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 27/45 (60%), Positives = 33/45 (73%)
 Frame = +3

Query: 312 LRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
           LRLDGRR  ELRRI+ Q+   + ADGS+  E GNTK+L +V GPH
Sbjct: 13  LRLDGRRWNELRRIHAQISTQAAADGSSYLEQGNTKILVSVTGPH 57

[127][TOP]
>UniRef100_Q2HRD9 Peptidase S8 and S53, subtilisin, kexin, sedolisin; 3
           exoribonuclease n=1 Tax=Medicago truncatula
           RepID=Q2HRD9_MEDTR
          Length = 241

 Score = 57.0 bits (136), Expect = 7e-07
 Identities = 29/60 (48%), Positives = 39/60 (65%)
 Frame = +3

Query: 315 RLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGALVV 494
           R DGR P +LR + C   VL  A GSA +  G TKVLAAV+GP A T+++E  E+ ++ V
Sbjct: 5   RPDGRSPNQLRPLACSHSVLHRAHGSATWAQGETKVLAAVYGPKAGTKKNENPEKASIEV 64

[128][TOP]
>UniRef100_B3LI42 Exosome complex exonuclease RRP41 n=1 Tax=Saccharomyces cerevisiae
           RM11-1a RepID=B3LI42_YEAS1
          Length = 246

 Score = 57.0 bits (136), Expect = 7e-07
 Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455
           +S +E  SPEGLRLDGRR  ELRR    ++   + ADGS+  E GN K++  V GP    
Sbjct: 1   MSRLEIYSPEGLRLDGRRWNELRRFESSINTHPHAADGSSYMEQGNNKIITLVKGPKEPR 60

Query: 456 RRSELREEGALV 491
            +S++    AL+
Sbjct: 61  LKSQMDTSKALL 72

[129][TOP]
>UniRef100_P46948 Exosome complex component SKI6 n=5 Tax=Saccharomyces cerevisiae
           RepID=RRP41_YEAST
          Length = 246

 Score = 57.0 bits (136), Expect = 7e-07
 Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455
           +S +E  SPEGLRLDGRR  ELRR    ++   + ADGS+  E GN K++  V GP    
Sbjct: 1   MSRLEIYSPEGLRLDGRRWNELRRFESSINTHPHAADGSSYMEQGNNKIITLVKGPKEPR 60

Query: 456 RRSELREEGALV 491
            +S++    AL+
Sbjct: 61  LKSQMDTSKALL 72

[130][TOP]
>UniRef100_Q0W2Y8 Putative exosome complex exonuclease 1 n=1 Tax=uncultured
           methanogenic archaeon RC-I RepID=Q0W2Y8_UNCMA
          Length = 253

 Score = 56.6 bits (135), Expect = 9e-07
 Identities = 32/71 (45%), Positives = 40/71 (56%)
 Frame = +3

Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
           +S  E +  +G RLDGR P +LR I  Q  VL  ADGS   E G  KV+AAV+GP  V  
Sbjct: 1   MSKPEKLIVDGKRLDGRGPFDLRPIKFQAGVLKRADGSCYLEFGGNKVMAAVYGPREVHP 60

Query: 459 RSELREEGALV 491
           R   +   A+V
Sbjct: 61  RHLQQASNAIV 71

[131][TOP]
>UniRef100_Q8U0L9 Probable exosome complex exonuclease 1 n=1 Tax=Pyrococcus furiosus
           RepID=ECX1_PYRFU
          Length = 250

 Score = 56.6 bits (135), Expect = 9e-07
 Identities = 27/68 (39%), Positives = 42/68 (61%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
           ++ +   G RLDGR+  ELR I  ++ VL NA+GSA  E G  K++AAV+GP  +  +  
Sbjct: 8   LKLIDENGRRLDGRKKYELRPIKMKVGVLKNANGSAYIEWGKNKIIAAVYGPREIHPKHL 67

Query: 468 LREEGALV 491
            R + A++
Sbjct: 68  QRPDRAIL 75

[132][TOP]
>UniRef100_D0A3H8 Exosome complex exonuclease RRP41A (Rrp41p homologue, putative) n=1
           Tax=Trypanosoma brucei gambiense DAL972
           RepID=D0A3H8_TRYBG
          Length = 252

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 26/70 (37%), Positives = 39/70 (55%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
           E+++P GLRLDGRRP E RR+  +   +S  DG      G + V A V+GP  V+ R + 
Sbjct: 6   EYINPAGLRLDGRRPNEPRRLALEFGKISGCDGCCTVVSGLSHVCATVYGPREVSNRLDG 65

Query: 471 REEGALVVCE 500
           +     + C+
Sbjct: 66  KYNEVTITCD 75

[133][TOP]
>UniRef100_Q0V679 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
           RepID=Q0V679_PHANO
          Length = 251

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 27/44 (61%), Positives = 33/44 (75%)
 Frame = +3

Query: 312 LRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443
           LRLDGRR  ELRRI+ Q+   + ADGS+  EMGNTK+L +V GP
Sbjct: 13  LRLDGRRWNELRRIHAQISTQAAADGSSYLEMGNTKILVSVTGP 56

[134][TOP]
>UniRef100_C6A456 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus
           sibiricus MM 739 RepID=C6A456_THESM
          Length = 246

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 24/55 (43%), Positives = 37/55 (67%)
 Frame = +3

Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV 452
           ++ +   G R+DGR+  ELR+I  ++ VL +ADGSA  E G  K++AAV+GP  +
Sbjct: 7   LKLIDENGYRVDGRKKYELRKIKMEVGVLKSADGSAYVEWGKNKIMAAVYGPREI 61

[135][TOP]
>UniRef100_B6K3J3 Exosome complex exonuclease RRP41 n=1 Tax=Schizosaccharomyces
           japonicus yFS275 RepID=B6K3J3_SCHJY
          Length = 243

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 29/73 (39%), Positives = 42/73 (57%)
 Frame = +3

Query: 282 SSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461
           S  E +S EGLR DGRR  E+R  +C++ V   A GS+  + GNT+VL  V GP     +
Sbjct: 3   SHYEVISAEGLRQDGRRWNEMREFDCRIGVEKTAHGSSFIQHGNTRVLCNVNGPSEPYIK 62

Query: 462 SELREEGALVVCE 500
            + ++E A +  E
Sbjct: 63  GKSKQEKAFINVE 75

[136][TOP]
>UniRef100_O59223 Probable exosome complex exonuclease 1 n=1 Tax=Pyrococcus
           horikoshii RepID=ECX1_PYRHO
          Length = 249

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 27/73 (36%), Positives = 43/73 (58%)
 Frame = +3

Query: 273 EHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV 452
           E    ++ +   G R+DGR+  ELR I  ++ VL NA+GSA  E G  K++AAV+GP  +
Sbjct: 3   EKPEGLKLIDENGRRIDGRKKYELRPIKMKVGVLKNANGSAYIEWGRNKIIAAVYGPREL 62

Query: 453 TRRSELREEGALV 491
             +   R + A++
Sbjct: 63  HSKHLQRPDRAIL 75

[137][TOP]
>UniRef100_Q9V119 Probable exosome complex exonuclease 1 n=1 Tax=Pyrococcus abyssi
           RepID=ECX1_PYRAB
          Length = 249

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 27/73 (36%), Positives = 43/73 (58%)
 Frame = +3

Query: 273 EHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV 452
           E    ++ +   G R+DGR+  ELR I  ++ VL NA+GSA  E G  K++AAV+GP  +
Sbjct: 3   EKPEGLKLIDENGRRIDGRKKYELRPIKMEVGVLKNANGSAYIEWGKNKIIAAVYGPREL 62

Query: 453 TRRSELREEGALV 491
             +   R + A++
Sbjct: 63  HPKHLQRPDRAIL 75

[138][TOP]
>UniRef100_Q6CA11 YALI0D06776p n=1 Tax=Yarrowia lipolytica RepID=Q6CA11_YARLI
          Length = 287

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
 Frame = +3

Query: 225 LPKFNTLYTQRSGD*GEHISSMEFVSPEGLRLDGRRPRELRRINCQLDV-LSNADGSAIF 401
           LP +++  TQ         S  E  SPEGLR DGRR  E+R  +C+++   ++ADGS+  
Sbjct: 38  LPSYSSPLTQ---------SRHEIYSPEGLRTDGRRWNEIRNFDCKINTHPTSADGSSYV 88

Query: 402 EMGNTKVLAAVFGPHAVTRRSELREEGALVV 494
           E G+TKV+  V GP     R    +   + V
Sbjct: 89  EWGHTKVVCTVDGPREPDNRQNTTDRAVISV 119

[139][TOP]
>UniRef100_B3TBC6 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
           marine crenarchaeote HF4000_APKG8O8 RepID=B3TBC6_9ARCH
          Length = 245

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 26/61 (42%), Positives = 35/61 (57%)
 Frame = +3

Query: 270 GEHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHA 449
           G   + +  +   G+R DGR+  E R++  +  VL NADGSA  E G  K+LA VFGP  
Sbjct: 2   GGRETDLVLLDENGIRCDGRKVNETRKVTIKAGVLKNADGSAYIEFGGNKILAGVFGPRD 61

Query: 450 V 452
           V
Sbjct: 62  V 62

[140][TOP]
>UniRef100_B3TAN7 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
           marine crenarchaeote HF4000_APKG8G2 RepID=B3TAN7_9ARCH
          Length = 245

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 26/61 (42%), Positives = 36/61 (59%)
 Frame = +3

Query: 270 GEHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHA 449
           G   + +  +   G+R DGR+  E R++  ++ VL NADGSA  E G  K+LA VFGP  
Sbjct: 2   GGRETDVVLLDENGIRSDGRKVNETRKVTIKVGVLKNADGSAYIEFGGNKILAGVFGPRD 61

Query: 450 V 452
           V
Sbjct: 62  V 62

[141][TOP]
>UniRef100_B3T985 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
           marine crenarchaeote HF4000_APKG6J21 RepID=B3T985_9ARCH
          Length = 245

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 26/61 (42%), Positives = 36/61 (59%)
 Frame = +3

Query: 270 GEHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHA 449
           G   + +  +   G+R DGR+  E R++  ++ VL NADGSA  E G  K+LA VFGP  
Sbjct: 2   GGRETDVVLLDENGIRSDGRKVNETRKVTIKVGVLKNADGSAYIEFGGNKILAGVFGPRD 61

Query: 450 V 452
           V
Sbjct: 62  V 62

[142][TOP]
>UniRef100_B3T8C1 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
           marine crenarchaeote HF4000_APKG5E24 RepID=B3T8C1_9ARCH
          Length = 245

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 26/61 (42%), Positives = 36/61 (59%)
 Frame = +3

Query: 270 GEHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHA 449
           G   + +  +   G+R DGR+  E R++  ++ VL NADGSA  E G  K+LA VFGP  
Sbjct: 2   GGRETDVVLLDENGIRSDGRKVNETRKVTIKVGVLKNADGSAYIEFGGNKILAGVFGPRD 61

Query: 450 V 452
           V
Sbjct: 62  V 62

[143][TOP]
>UniRef100_Q9LX74 AT3G46210 protein n=1 Tax=Arabidopsis thaliana RepID=Q9LX74_ARATH
          Length = 239

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 27/60 (45%), Positives = 38/60 (63%)
 Frame = +3

Query: 315 RLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGALVV 494
           R DGR P +LR + C  ++L    GSA +  G+TKVLAAV+GP A T+++E  E+    V
Sbjct: 5   REDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKACFEV 64

[144][TOP]
>UniRef100_B9H8Z6 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H8Z6_POPTR
          Length = 243

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 28/60 (46%), Positives = 40/60 (66%)
 Frame = +3

Query: 315 RLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGALVV 494
           R DGR P +LR ++C  +VL  A GSA +  G+TKV AAV+GP A T+++E  E+  + V
Sbjct: 5   RDDGRSPSQLRPLSCSHNVLHRAHGSASWSQGDTKVSAAVYGPKAGTKKNENPEKACVEV 64

[145][TOP]
>UniRef100_Q5TMQ4 AGAP011906-PA n=1 Tax=Anopheles gambiae RepID=Q5TMQ4_ANOGA
          Length = 308

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 27/66 (40%), Positives = 42/66 (63%)
 Frame = +3

Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
           E +  +G R DGRR +E R+   ++ V+S A GSA  E+GNTKV+ +VF P  + ++++ 
Sbjct: 35  EALGKDGKRKDGRRLQESRKYYAKIGVVSTAKGSAYVELGNTKVIVSVFDPREIPKQNKF 94

Query: 471 REEGAL 488
            E G L
Sbjct: 95  CELGEL 100

[146][TOP]
>UniRef100_A7P578 Chromosome chr4 scaffold_6, whole genome shotgun sequence n=2
           Tax=Vitis vinifera RepID=A7P578_VITVI
          Length = 243

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 27/60 (45%), Positives = 40/60 (66%)
 Frame = +3

Query: 315 RLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGALVV 494
           R DGR   +LR + C  ++L+ A GSA +  G+TKVLAAV+GP A T+++E  E+  + V
Sbjct: 5   RDDGRTANQLRPLACSRNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKACIEV 64

[147][TOP]
>UniRef100_B9RRX9 Exosome complex exonuclease RRP46, putative n=1 Tax=Ricinus
           communis RepID=B9RRX9_RICCO
          Length = 211

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 28/60 (46%), Positives = 40/60 (66%)
 Frame = +3

Query: 315 RLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGALVV 494
           R DGR P +LR + C  +VL+ A GSA +  G+TKVLAAV+GP   T+++E  E+  + V
Sbjct: 5   RDDGRTPNQLRPLACSRNVLNRAHGSASWCQGDTKVLAAVYGPKPGTKKNENPEKACIEV 64

[148][TOP]
>UniRef100_A8A8Z2 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Ignicoccus
           hospitalis KIN4/I RepID=A8A8Z2_IGNH4
          Length = 241

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 27/64 (42%), Positives = 40/64 (62%)
 Frame = +3

Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGA 485
           +G R DGR P +LR +  ++ VL NADGSA   +G T+V+AAV+GP     R  +  + A
Sbjct: 12  DGKRHDGRGPADLRPLEMKVGVLYNADGSAWLRIGGTEVVAAVYGPREPPMRGMVLPDRA 71

Query: 486 LVVC 497
           ++ C
Sbjct: 72  VIRC 75

[149][TOP]
>UniRef100_A8MA84 Exosome complex exonuclease 1 n=1 Tax=Caldivirga maquilingensis
           IC-167 RepID=A8MA84_CALMQ
          Length = 242

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 26/46 (56%), Positives = 33/46 (71%)
 Frame = +3

Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443
           +G R+DGR P E R +  Q+ VL NA+GSA+   GNT VLAAV+GP
Sbjct: 12  DGKRVDGRLPEEHRPVTMQVGVLPNANGSALVAYGNTVVLAAVYGP 57

[150][TOP]
>UniRef100_C0PI41 Putative uncharacterized protein n=1 Tax=Zea mays
           RepID=C0PI41_MAIZE
          Length = 149

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 28/62 (45%), Positives = 38/62 (61%)
 Frame = +3

Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGAL 488
           G R DGR P +LR   C  + L  A GSA +  G+T VLAAV+GP + TR+ E  E+ ++
Sbjct: 5   GSRADGRNPNQLRPFTCTGNPLHRAHGSARWAQGDTVVLAAVYGPKSGTRKGENPEKASI 64

Query: 489 VV 494
            V
Sbjct: 65  EV 66

[151][TOP]
>UniRef100_B8A1N7 Putative uncharacterized protein n=1 Tax=Zea mays
           RepID=B8A1N7_MAIZE
          Length = 240

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 28/62 (45%), Positives = 38/62 (61%)
 Frame = +3

Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGAL 488
           G R DGR P +LR   C  + L  A GSA +  G+T VLAAV+GP + TR+ E  E+ ++
Sbjct: 5   GSRADGRNPNQLRPFTCTGNPLHRAHGSARWAQGDTVVLAAVYGPKSGTRKGENPEKASI 64

Query: 489 VV 494
            V
Sbjct: 65  EV 66

[152][TOP]
>UniRef100_A9US69 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9US69_MONBE
          Length = 256

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +3

Query: 300 SPEGL-RLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 476
           +P G  R DGR P +LR ++C   V S ADGSA F +G T V  +VFG   V  RSEL +
Sbjct: 6   NPNGAAREDGRAPNQLRELSCDFAVNSAADGSARFRLGQTCVEVSVFGFRGVPVRSELPD 65

Query: 477 EGALVV 494
             A+ V
Sbjct: 66  RSAIEV 71

[153][TOP]
>UniRef100_Q647V6 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos9D1
           RepID=Q647V6_9ARCH
          Length = 245

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 27/52 (51%), Positives = 34/52 (65%)
 Frame = +3

Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461
           +G RLDGR   ELR I  ++ VL  ADGS   E+GN KV+AAV+GP  +  R
Sbjct: 10  DGKRLDGRGFDELRPIKIEVGVLKRADGSCYLELGNNKVIAAVYGPREMHPR 61

[154][TOP]
>UniRef100_A3MUP1 Probable exosome complex exonuclease 1 n=1 Tax=Pyrobaculum
           calidifontis JCM 11548 RepID=ECX1_PYRCJ
          Length = 246

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = +3

Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV-TRRSELREEGA 485
           GLR DGR P ++R +  Q+  +SNADGSA+   G T  +AAV+GP  +  R   L + G 
Sbjct: 12  GLRADGRAPDQMREVQIQVGTVSNADGSAVVSYGATTAVAAVYGPREMHPRHLSLPDRGV 71

Query: 486 LVV 494
           + V
Sbjct: 72  MRV 74