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[1][TOP] >UniRef100_A8J275 3'-5' exoribonuclease PH component of the exosome n=1 Tax=Chlamydomonas reinhardtii RepID=A8J275_CHLRE Length = 245 Score = 145 bits (365), Expect = 2e-33 Identities = 73/74 (98%), Positives = 73/74 (98%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE Sbjct: 1 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 60 Query: 468 LREEGALVVCE*SM 509 LREEGALVVCE SM Sbjct: 61 LREEGALVVCEYSM 74 [2][TOP] >UniRef100_C1EDA5 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EDA5_9CHLO Length = 261 Score = 96.3 bits (238), Expect = 1e-18 Identities = 48/74 (64%), Positives = 56/74 (75%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 ME+VS EGLRLDGRRP+E RR+ C+L L +DGSA+FE+GNTKVLAAV GPH R SE Sbjct: 1 MEYVSLEGLRLDGRRPKETRRMRCELTALPGSDGSAVFELGNTKVLAAVHGPHECRRPSE 60 Query: 468 LREEGALVVCE*SM 509 E+ LV CE SM Sbjct: 61 RLEDRLLVKCEVSM 74 [3][TOP] >UniRef100_B9I8T9 Predicted protein n=2 Tax=Populus RepID=B9I8T9_POPTR Length = 241 Score = 96.3 bits (238), Expect = 1e-18 Identities = 46/74 (62%), Positives = 58/74 (78%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 MEFV+PEGLRLDGRRP E+R++ Q+ ++ ADGSA+FEMGNTKV+AAV+GP V RS+ Sbjct: 1 MEFVNPEGLRLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60 Query: 468 LREEGALVVCE*SM 509 + ALV CE SM Sbjct: 61 QINDQALVRCEYSM 74 [4][TOP] >UniRef100_C6TJ02 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6TJ02_SOYBN Length = 190 Score = 95.5 bits (236), Expect = 2e-18 Identities = 47/74 (63%), Positives = 57/74 (77%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 ME+VSPEGLRLDGRRP E+R+I ++ +S ADGSAIFEMGNTKV+AAV+GP V R++ Sbjct: 1 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRNQ 60 Query: 468 LREEGALVVCE*SM 509 ALV CE SM Sbjct: 61 QISSHALVRCEYSM 74 [5][TOP] >UniRef100_B9SWZ0 Exosome complex exonuclease RRP41, putative n=1 Tax=Ricinus communis RepID=B9SWZ0_RICCO Length = 241 Score = 95.1 bits (235), Expect = 2e-18 Identities = 46/74 (62%), Positives = 58/74 (78%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 ME+VSPEGLRLDGRRP E+R++ Q+ +S ADGSA+FEMGNTKV+AAV+GP V RS+ Sbjct: 1 MEYVSPEGLRLDGRRPMEMRQLRAQIGAVSKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60 Query: 468 LREEGALVVCE*SM 509 + ALV CE +M Sbjct: 61 QIIDQALVRCEYTM 74 [6][TOP] >UniRef100_A5BIU1 Chromosome chr15 scaffold_40, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A5BIU1_VITVI Length = 241 Score = 93.6 bits (231), Expect = 7e-18 Identities = 46/74 (62%), Positives = 57/74 (77%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 MEFVSPEGLRLDGRRP E+R+I ++ ++ ADGSA FEMGNTKV+AAV+GP V RS+ Sbjct: 1 MEFVSPEGLRLDGRRPMEMRQIRGEIGAVAKADGSAFFEMGNTKVIAAVYGPREVENRSQ 60 Query: 468 LREEGALVVCE*SM 509 + ALV CE +M Sbjct: 61 QISDQALVRCEYTM 74 [7][TOP] >UniRef100_Q9SP08 Exonuclease RRP41 n=1 Tax=Arabidopsis thaliana RepID=Q9SP08_ARATH Length = 241 Score = 88.6 bits (218), Expect = 2e-16 Identities = 43/75 (57%), Positives = 61/75 (81%), Gaps = 1/75 (1%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 ME+V+PEGLRLDGRR E+R+I ++ V+S ADGSA+FEMGNTKV+AAV+GP + +S+ Sbjct: 1 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 60 Query: 468 LRE-EGALVVCE*SM 509 ++ + A+V+CE SM Sbjct: 61 QKKNDHAVVLCEYSM 75 [8][TOP] >UniRef100_A9TY02 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TY02_PHYPA Length = 246 Score = 87.8 bits (216), Expect = 4e-16 Identities = 42/73 (57%), Positives = 55/73 (75%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470 EFVSPEGLRLDGRRP E+R ++ + V+ +ADGSA+F MGNT+V+A V+GPH V ++ Sbjct: 4 EFVSPEGLRLDGRRPPEMRHLHAVVGVVPSADGSALFHMGNTQVMAVVYGPHEVHNKAHQ 63 Query: 471 REEGALVVCE*SM 509 + ALV CE SM Sbjct: 64 LHDKALVRCEYSM 76 [9][TOP] >UniRef100_B3RL48 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens RepID=B3RL48_TRIAD Length = 243 Score = 84.7 bits (208), Expect = 3e-15 Identities = 37/64 (57%), Positives = 49/64 (76%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 ME +SPEGLR+DGRRP E+RR NC+L VLS ADGSA E GNTK LA++ GPH +++ Sbjct: 1 MEIISPEGLRIDGRRPEEIRRFNCRLGVLSRADGSAYLEQGNTKALASINGPHQAGDKAK 60 Query: 468 LREE 479 ++ + Sbjct: 61 IKHD 64 [10][TOP] >UniRef100_Q16KB4 Exosome complex exonuclease RRP41, putative n=1 Tax=Aedes aegypti RepID=Q16KB4_AEDAE Length = 245 Score = 84.0 bits (206), Expect = 5e-15 Identities = 44/74 (59%), Positives = 50/74 (67%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 ME +S EGLRLDGRR ELRRI C+L V S DGSA E GNTKVLAAV+GPH + Sbjct: 1 MELLSDEGLRLDGRRANELRRIQCKLGVFSQPDGSAYIEQGNTKVLAAVYGPHQAPAKKS 60 Query: 468 LREEGALVVCE*SM 509 EE +V C+ SM Sbjct: 61 SHEE-VIVNCQYSM 73 [11][TOP] >UniRef100_UPI0001923A5C PREDICTED: similar to putative exosome complex exonuclease RRP41 n=1 Tax=Hydra magnipapillata RepID=UPI0001923A5C Length = 244 Score = 83.2 bits (204), Expect = 9e-15 Identities = 38/77 (49%), Positives = 54/77 (70%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458 ++ ++ VSPEGLR DGR+ ELR+I + + S ADGSA E GNTKV+A+V+GPH V+ Sbjct: 1 MAGLDLVSPEGLRFDGRKCHELRKITAKKGIFSQADGSAYIEQGNTKVIASVYGPHEVSN 60 Query: 459 RSELREEGALVVCE*SM 509 RS+ + L+ C+ SM Sbjct: 61 RSKTLHDSTLINCQFSM 77 [12][TOP] >UniRef100_B0XII7 Exosome complex exonuclease RRP41 n=1 Tax=Culex quinquefasciatus RepID=B0XII7_CULQU Length = 245 Score = 82.8 bits (203), Expect = 1e-14 Identities = 44/74 (59%), Positives = 50/74 (67%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 ME +S EGLRLDGRR ELRRI C+L V S DGSA E GNTKVLAAV+GPH + Sbjct: 1 MELLSDEGLRLDGRRSNELRRIQCKLGVFSQPDGSAYVEQGNTKVLAAVYGPHQAPAKKS 60 Query: 468 LREEGALVVCE*SM 509 EE +V C+ SM Sbjct: 61 NHEE-CVVNCQYSM 73 [13][TOP] >UniRef100_C1MWG2 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MWG2_9CHLO Length = 245 Score = 81.3 bits (199), Expect = 4e-14 Identities = 39/71 (54%), Positives = 49/71 (69%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 ME+VS EGLRLDGRRP+E R++ C + VL ADGSA F GNT+V+ AV GP R E Sbjct: 1 MEYVSLEGLRLDGRRPKETRQMRCAMGVLPAADGSAEFRAGNTRVMCAVHGPRECVNRGE 60 Query: 468 LREEGALVVCE 500 +E A++ CE Sbjct: 61 RDDERAIIKCE 71 [14][TOP] >UniRef100_Q54EU6 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum RepID=Q54EU6_DICDI Length = 247 Score = 80.9 bits (198), Expect = 5e-14 Identities = 36/74 (48%), Positives = 53/74 (71%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458 +S + ++SPEGLR+DGRR ELRRIN ++ + ADGSA +E GNTK++AAV+GP ++ Sbjct: 1 MSKLSYISPEGLRIDGRRANELRRINVEMGIFKRADGSAYYEQGNTKIIAAVYGPREISV 60 Query: 459 RSELREEGALVVCE 500 + + A+V CE Sbjct: 61 SGKGVFDRAVVKCE 74 [15][TOP] >UniRef100_B7P8R1 Exosomal 3'-5' exoribonuclease complex, subunit Rrp41, putative n=1 Tax=Ixodes scapularis RepID=B7P8R1_IXOSC Length = 246 Score = 79.3 bits (194), Expect = 1e-13 Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 1/78 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455 ++ +E +S EG RLDGR+P E R+I+C+L V S ADGSA E GN KVLAAV+GPH Sbjct: 1 MAGLELLSDEGYRLDGRKPNEQRKIDCRLGVFSQADGSAYIEQGNAKVLAAVYGPHEPRG 60 Query: 456 RRSELREEGALVVCE*SM 509 RS + LV C+ SM Sbjct: 61 NRSRALHDRVLVNCQFSM 78 [16][TOP] >UniRef100_A7S1D9 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S1D9_NEMVE Length = 247 Score = 79.3 bits (194), Expect = 1e-13 Identities = 36/71 (50%), Positives = 52/71 (73%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458 ++ +E +SPEGLR+DGR+ ELR++ C++ VLS ADGSA EMGNTK LA V+GPH V Sbjct: 1 MAGLEVLSPEGLRIDGRKASELRKMVCKVGVLSQADGSAYIEMGNTKALATVYGPHEVQN 60 Query: 459 RSELREEGALV 491 +++ + L+ Sbjct: 61 KAKALHDRVLL 71 [17][TOP] >UniRef100_UPI000186CE6C Exosome complex exonuclease RRP41, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186CE6C Length = 253 Score = 79.0 bits (193), Expect = 2e-13 Identities = 38/70 (54%), Positives = 50/70 (71%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470 + +S + LRLDGRR ELR+I C+L V S DGSA EMGNTKVLAAV+GPH V R++ Sbjct: 3 KLISDQNLRLDGRRASELRQIRCKLGVFSQPDGSAYIEMGNTKVLAAVYGPHQVRGRTKP 62 Query: 471 REEGALVVCE 500 + A++ C+ Sbjct: 63 LLDAAVINCQ 72 [18][TOP] >UniRef100_B4MX14 GK15569 n=1 Tax=Drosophila willistoni RepID=B4MX14_DROWI Length = 251 Score = 78.6 bits (192), Expect = 2e-13 Identities = 36/71 (50%), Positives = 48/71 (67%) Frame = +3 Query: 282 SSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461 ++ E +S +GLRLDGRRP ELR I C+L V DGSA E GNTKVLAAV+GPH + Sbjct: 3 ANFELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKGK 62 Query: 462 SELREEGALVV 494 ++ E +++ Sbjct: 63 NKSSESNDVII 73 [19][TOP] >UniRef100_UPI000179264C PREDICTED: similar to exosome complex exonuclease RRP41, partial n=1 Tax=Acyrthosiphon pisum RepID=UPI000179264C Length = 122 Score = 78.2 bits (191), Expect = 3e-13 Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 1/75 (1%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV-TRRS 464 M+ +S +GLR DGRR ELRRI C++ V + DGSA E GNTKV+AA++GPH + T R+ Sbjct: 1 MDLLSRQGLRTDGRRSGELRRIRCKMGVFNQPDGSAYLEQGNTKVVAAIYGPHEIRTNRA 60 Query: 465 ELREEGALVVCE*SM 509 + + A++ C+ SM Sbjct: 61 KAPNDSAVINCQYSM 75 [20][TOP] >UniRef100_C4WSG4 ACYPI001085 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSG4_ACYPI Length = 213 Score = 78.2 bits (191), Expect = 3e-13 Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 1/75 (1%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV-TRRS 464 M+ +S +GLR DGRR ELRRI C++ V + DGSA E GNTKV+AA++GPH + T R+ Sbjct: 1 MDLLSRQGLRTDGRRSGELRRIRCKMGVFNQPDGSAYLEQGNTKVVAAIYGPHEIRTNRA 60 Query: 465 ELREEGALVVCE*SM 509 + + A++ C+ SM Sbjct: 61 KAPNDSAVINCQYSM 75 [21][TOP] >UniRef100_B4JCT4 GH10637 n=1 Tax=Drosophila grimshawi RepID=B4JCT4_DROGR Length = 249 Score = 78.2 bits (191), Expect = 3e-13 Identities = 39/61 (63%), Positives = 45/61 (73%), Gaps = 1/61 (1%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH-AVTRRS 464 ME +S +GLRLDGRRP ELR I C+L V DGSA E GNTKVLAAV+GPH A ++S Sbjct: 5 MELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKAKKS 64 Query: 465 E 467 E Sbjct: 65 E 65 [22][TOP] >UniRef100_UPI00006A4B1C PREDICTED: similar to LOC495942 protein n=1 Tax=Ciona intestinalis RepID=UPI00006A4B1C Length = 247 Score = 77.0 bits (188), Expect = 7e-13 Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 2/76 (2%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458 ++ E +S EG R DGR+P ELRR+ C + V + ADGSA E GNTKVLAA++GPH + Sbjct: 1 MAGFELISDEGYRFDGRKPSELRRVRCNMGVFTQADGSAYIEQGNTKVLAAIYGPHEASN 60 Query: 459 --RSELREEGALVVCE 500 RS + + + CE Sbjct: 61 NMRSRVCLDKCFINCE 76 [23][TOP] >UniRef100_B4P324 GE11809 n=1 Tax=Drosophila yakuba RepID=B4P324_DROYA Length = 246 Score = 77.0 bits (188), Expect = 7e-13 Identities = 36/52 (69%), Positives = 40/52 (76%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446 E +S +GLRLDGRRP ELRRI C+L V DGSA E GNTKVLAAV+GPH Sbjct: 6 ELLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57 [24][TOP] >UniRef100_B4KHM2 GI10716 n=1 Tax=Drosophila mojavensis RepID=B4KHM2_DROMO Length = 249 Score = 77.0 bits (188), Expect = 7e-13 Identities = 36/53 (67%), Positives = 40/53 (75%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446 ME +S +GLRLDGRRP ELR I C+L V DGSA E GNTKVLAAV+GPH Sbjct: 5 MELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57 [25][TOP] >UniRef100_B3NB10 GG10219 n=1 Tax=Drosophila erecta RepID=B3NB10_DROER Length = 246 Score = 77.0 bits (188), Expect = 7e-13 Identities = 36/52 (69%), Positives = 40/52 (76%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446 E +S +GLRLDGRRP ELRRI C+L V DGSA E GNTKVLAAV+GPH Sbjct: 6 ELLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57 [26][TOP] >UniRef100_B3MN36 GF15621 n=1 Tax=Drosophila ananassae RepID=B3MN36_DROAN Length = 249 Score = 77.0 bits (188), Expect = 7e-13 Identities = 36/55 (65%), Positives = 41/55 (74%) Frame = +3 Query: 282 SSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446 S+ E +S +GLRLDGRRP ELR I C+L V DGSA E GNTKVLAAV+GPH Sbjct: 3 SNFELLSEQGLRLDGRRPHELRHIQCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57 [27][TOP] >UniRef100_B4M9A1 GJ18275 n=1 Tax=Drosophila virilis RepID=B4M9A1_DROVI Length = 249 Score = 76.6 bits (187), Expect = 9e-13 Identities = 36/55 (65%), Positives = 41/55 (74%) Frame = +3 Query: 282 SSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446 S +E +S +GLRLDGRRP ELR I C+L V DGSA E GNTKVLAAV+GPH Sbjct: 3 SRIELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57 [28][TOP] >UniRef100_A8PTK4 Putative exosome complex exonuclease RRP41, putative n=1 Tax=Brugia malayi RepID=A8PTK4_BRUMA Length = 249 Score = 76.6 bits (187), Expect = 9e-13 Identities = 36/74 (48%), Positives = 49/74 (66%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 M +S G R DGR+P ++R +N +L V S ADGSA E GNTKVL AV+GP+ +RS Sbjct: 1 MSIISEHGFRQDGRKPHQIRNLNYKLGVYSQADGSAYLEQGNTKVLCAVYGPYEPKQRSR 60 Query: 468 LREEGALVVCE*SM 509 L E+ ++ C+ SM Sbjct: 61 LLEDRCIINCQYSM 74 [29][TOP] >UniRef100_B9G2C8 Putative uncharacterized protein n=2 Tax=Oryza sativa RepID=B9G2C8_ORYSJ Length = 242 Score = 76.3 bits (186), Expect = 1e-12 Identities = 37/73 (50%), Positives = 55/73 (75%), Gaps = 2/73 (2%) Frame = +3 Query: 288 MEFVSP-EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR- 461 ME+V+P G R+DGRRP E+R++ ++ V++ ADGSA+FEMGNT+V+AAV+GP V + Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKG 60 Query: 462 SELREEGALVVCE 500 ++ + ALV CE Sbjct: 61 QQVNSKDALVRCE 73 [30][TOP] >UniRef100_B4FDA8 Putative uncharacterized protein n=1 Tax=Zea mays RepID=B4FDA8_MAIZE Length = 242 Score = 75.9 bits (185), Expect = 1e-12 Identities = 37/73 (50%), Positives = 55/73 (75%), Gaps = 2/73 (2%) Frame = +3 Query: 288 MEFVSP-EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR- 461 ME+V+P G R+DGRRP E+R++ ++ V++ ADGSA+FEMGNT+V+AAV+GP V + Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKG 60 Query: 462 SELREEGALVVCE 500 ++ + ALV CE Sbjct: 61 QQVNSKEALVRCE 73 [31][TOP] >UniRef100_Q9VK19 FI07225p n=1 Tax=Drosophila melanogaster RepID=Q9VK19_DROME Length = 246 Score = 75.9 bits (185), Expect = 1e-12 Identities = 35/52 (67%), Positives = 40/52 (76%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446 + +S +GLRLDGRRP ELRRI C+L V DGSA E GNTKVLAAV+GPH Sbjct: 6 DLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57 [32][TOP] >UniRef100_Q8SYC8 RE67757p n=1 Tax=Drosophila melanogaster RepID=Q8SYC8_DROME Length = 246 Score = 75.9 bits (185), Expect = 1e-12 Identities = 35/52 (67%), Positives = 40/52 (76%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446 + +S +GLRLDGRRP ELRRI C+L V DGSA E GNTKVLAAV+GPH Sbjct: 6 DLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57 [33][TOP] >UniRef100_B4IEH2 GM25757 n=1 Tax=Drosophila sechellia RepID=B4IEH2_DROSE Length = 246 Score = 75.9 bits (185), Expect = 1e-12 Identities = 35/52 (67%), Positives = 40/52 (76%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446 + +S +GLRLDGRRP ELRRI C+L V DGSA E GNTKVLAAV+GPH Sbjct: 6 DLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57 [34][TOP] >UniRef100_C5YZ99 Putative uncharacterized protein Sb09g022550 n=1 Tax=Sorghum bicolor RepID=C5YZ99_SORBI Length = 242 Score = 75.5 bits (184), Expect = 2e-12 Identities = 37/73 (50%), Positives = 54/73 (73%), Gaps = 2/73 (2%) Frame = +3 Query: 288 MEFVSP-EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR- 461 ME+V+P G R+DGRRP E+R++ ++ V++ ADGSA+FEMGNT+V+AAV+GP V + Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKG 60 Query: 462 SELREEGALVVCE 500 ++ ALV CE Sbjct: 61 QQVNSNEALVRCE 73 [35][TOP] >UniRef100_Q29KH8 GA13761 n=2 Tax=pseudoobscura subgroup RepID=Q29KH8_DROPS Length = 249 Score = 75.5 bits (184), Expect = 2e-12 Identities = 35/54 (64%), Positives = 40/54 (74%) Frame = +3 Query: 285 SMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446 + E +S +GLRLDGRRP ELR I C+L V DGSA E GNTKVLAAV+GPH Sbjct: 4 NFELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57 [36][TOP] >UniRef100_C5YVG7 Putative uncharacterized protein Sb09g028170 n=1 Tax=Sorghum bicolor RepID=C5YVG7_SORBI Length = 242 Score = 75.1 bits (183), Expect = 3e-12 Identities = 36/73 (49%), Positives = 54/73 (73%), Gaps = 2/73 (2%) Frame = +3 Query: 288 MEFVSP-EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR- 461 ME+V+P G R+DGRRP E+R++ ++ +++ ADGSA+FEMGNT+V+AAV+GP V + Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGIVARADGSALFEMGNTRVIAAVYGPREVQNKG 60 Query: 462 SELREEGALVVCE 500 ++ ALV CE Sbjct: 61 QQVNSNEALVRCE 73 [37][TOP] >UniRef100_B6T763 Exosome complex exonuclease RRP41 n=1 Tax=Zea mays RepID=B6T763_MAIZE Length = 242 Score = 74.7 bits (182), Expect = 3e-12 Identities = 37/73 (50%), Positives = 54/73 (73%), Gaps = 2/73 (2%) Frame = +3 Query: 288 MEFVSP-EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR- 461 ME+V+P G R+DGRRP E+R++ ++ V+ ADGSA+FEMGNT+V+AAV+GP V + Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVVRADGSALFEMGNTRVIAAVYGPREVQNKG 60 Query: 462 SELREEGALVVCE 500 ++ + ALV CE Sbjct: 61 QQVNSKEALVRCE 73 [38][TOP] >UniRef100_UPI0001862F93 hypothetical protein BRAFLDRAFT_218985 n=1 Tax=Branchiostoma floridae RepID=UPI0001862F93 Length = 244 Score = 74.3 bits (181), Expect = 4e-12 Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 1/78 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458 ++ +E +S +G R+DGRR ELR++ ++ V + ADGSA E GNTK LA V+GPH V + Sbjct: 1 MAGLEIISDQGYRIDGRRSSELRKVCARMGVFTQADGSAYIEQGNTKALATVYGPHEVRK 60 Query: 459 -RSELREEGALVVCE*SM 509 R +++ + A+V C+ SM Sbjct: 61 GRGKIQHDRAVVNCQFSM 78 [39][TOP] >UniRef100_UPI00003608A8 UPI00003608A8 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00003608A8 Length = 245 Score = 74.3 bits (181), Expect = 4e-12 Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 1/78 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455 ++ +E +S +G R+DGR+ ELR+I ++ V + ADGSA E GNTKVLA V+GPH + Sbjct: 1 MAGLELLSDQGYRIDGRKATELRKIQARMGVFAQADGSAYLEQGNTKVLAVVYGPHEMRG 60 Query: 456 RRSELREEGALVVCE*SM 509 RS R + A++ C+ SM Sbjct: 61 SRSRARHDRAVINCQYSM 78 [40][TOP] >UniRef100_C3XU58 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae RepID=C3XU58_BRAFL Length = 246 Score = 74.3 bits (181), Expect = 4e-12 Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 1/78 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458 ++ +E +S +G R+DGRR ELR++ ++ V + ADGSA E GNTK LA V+GPH V + Sbjct: 1 MAGLEIISDQGYRIDGRRSSELRKVCARMGVFTQADGSAYIEQGNTKALATVYGPHEVRK 60 Query: 459 -RSELREEGALVVCE*SM 509 R +++ + A+V C+ SM Sbjct: 61 GRGKIQHDRAVVNCQFSM 78 [41][TOP] >UniRef100_UPI00017B08EC UPI00017B08EC related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B08EC Length = 245 Score = 72.8 bits (177), Expect = 1e-11 Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 1/78 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455 ++ +E +S +G R+DGR+ ELR+I ++ V + ADGSA E GNTK LA V+GPH + Sbjct: 1 MAGLELLSDQGYRIDGRKATELRKIQARMGVFAQADGSAYLEQGNTKALAVVYGPHEMRG 60 Query: 456 RRSELREEGALVVCE*SM 509 RS R + A++ C+ SM Sbjct: 61 SRSRARHDRAVINCQYSM 78 [42][TOP] >UniRef100_UPI0000EDBA5C PREDICTED: similar to Chain C, Structure Of The Human Rna Exosome Composed Of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, And Rrp40 n=1 Tax=Ornithorhynchus anatinus RepID=UPI0000EDBA5C Length = 245 Score = 72.4 bits (176), Expect = 2e-11 Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 1/78 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455 ++ +E +S EG R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH + Sbjct: 1 MAGLELLSDEGYRVDGRRAGELRKIEARMGVFAQADGSAYIEQGNTKALAVVYGPHEMRG 60 Query: 456 RRSELREEGALVVCE*SM 509 RS + ALV C+ SM Sbjct: 61 LRSRALPDRALVNCQFSM 78 [43][TOP] >UniRef100_Q6PBZ8 Exosc4 protein n=1 Tax=Danio rerio RepID=Q6PBZ8_DANRE Length = 245 Score = 72.0 bits (175), Expect = 2e-11 Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 1/78 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455 ++ +E +S +G RLDGR+ ELR++ ++ V + ADGSA E GNTK LA V+GPH + Sbjct: 1 MAGLELLSDQGYRLDGRKATELRKVQARMSVFAQADGSAYLEQGNTKALAVVYGPHEIRG 60 Query: 456 RRSELREEGALVVCE*SM 509 RS+ + A++ C+ SM Sbjct: 61 SRSKSLHDRAIINCQYSM 78 [44][TOP] >UniRef100_B5X813 Exosome complex exonuclease RRP41 n=1 Tax=Salmo salar RepID=B5X813_SALSA Length = 245 Score = 72.0 bits (175), Expect = 2e-11 Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 1/78 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455 ++ +E +S +G RLDGR+ ELR++ ++ V + ADGSA E GNTK LA V+GPH V Sbjct: 1 MAGLELLSDQGYRLDGRKAAELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVRG 60 Query: 456 RRSELREEGALVVCE*SM 509 RS+ + A++ C+ SM Sbjct: 61 SRSKTLHDRAVINCQYSM 78 [45][TOP] >UniRef100_Q975G8 Probable exosome complex exonuclease 1 n=1 Tax=Sulfolobus tokodaii RepID=ECX1_SULTO Length = 247 Score = 72.0 bits (175), Expect = 2e-11 Identities = 34/45 (75%), Positives = 39/45 (86%) Frame = +3 Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443 GLRLDGR+P E+R I +L VL NADGSAIFEMGNTKV+AAV+GP Sbjct: 18 GLRLDGRKPDEMRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGP 62 [46][TOP] >UniRef100_UPI00005EC0D3 PREDICTED: similar to Chain G, Structure Of The Human Rna Exosome Composed Of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42, Csl4, Rrp4, And Rrp40 n=1 Tax=Monodelphis domestica RepID=UPI00005EC0D3 Length = 245 Score = 71.6 bits (174), Expect = 3e-11 Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 1/78 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455 ++ +E +S +G R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH + Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEMRG 60 Query: 456 RRSELREEGALVVCE*SM 509 RS + ALV C+ SM Sbjct: 61 SRSRALPDRALVNCQYSM 78 [47][TOP] >UniRef100_C1BWS7 Exosome complex exonuclease RRP41 n=1 Tax=Esox lucius RepID=C1BWS7_ESOLU Length = 245 Score = 71.6 bits (174), Expect = 3e-11 Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 1/78 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV-T 455 ++ +E +S +G RLDGR+ ELR++ ++ V + ADGSA E GNTK LA V+GPH V Sbjct: 1 MAGVELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVRM 60 Query: 456 RRSELREEGALVVCE*SM 509 RS+ + A++ C+ SM Sbjct: 61 SRSKTLHDRAVINCQYSM 78 [48][TOP] >UniRef100_Q5PQ94 LOC495942 protein n=1 Tax=Xenopus laevis RepID=Q5PQ94_XENLA Length = 249 Score = 71.2 bits (173), Expect = 4e-11 Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 1/78 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455 ++ ME +S +G R+DGR+ ELR+I ++ V + ADGSA E GNTK LA V+GPH + Sbjct: 1 MAGMELLSDQGYRVDGRKAGELRKIRARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60 Query: 456 RRSELREEGALVVCE*SM 509 RS++ + ++ C+ SM Sbjct: 61 SRSKMLHDRCVINCQYSM 78 [49][TOP] >UniRef100_UPI00005A29C7 PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal RNA processing protein 41) (Exosome component 4) (p12A) isoform 4 n=1 Tax=Canis lupus familiaris RepID=UPI00005A29C7 Length = 244 Score = 70.9 bits (172), Expect = 5e-11 Identities = 34/74 (45%), Positives = 47/74 (63%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458 ++ +E +S +G R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEARG 60 Query: 459 RSELREEGALVVCE 500 L + ALV C+ Sbjct: 61 VRTLTQRKALVNCQ 74 [50][TOP] >UniRef100_UPI00001CFD4D exosome component 4 n=1 Tax=Rattus norvegicus RepID=UPI00001CFD4D Length = 245 Score = 70.9 bits (172), Expect = 5e-11 Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455 ++ +E +S +G R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH + Sbjct: 1 MAGLELLSDQGYRIDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60 Query: 456 RRSELREEGALVVCE 500 RS + ALV C+ Sbjct: 61 SRSRALPDRALVNCQ 75 [51][TOP] >UniRef100_Q28H58 Exosome component 4 n=1 Tax=Xenopus (Silurana) tropicalis RepID=Q28H58_XENTR Length = 249 Score = 70.9 bits (172), Expect = 5e-11 Identities = 34/78 (43%), Positives = 53/78 (67%), Gaps = 1/78 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455 ++ +E +S +G R+DGR+ ELR+I ++ V + ADGSA E GNTK LA V+GPH + Sbjct: 1 MAGLELLSDQGYRVDGRKAGELRKIRARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60 Query: 456 RRSELREEGALVVCE*SM 509 RS++ + ++V C+ SM Sbjct: 61 SRSKMLHDRSVVNCQYSM 78 [52][TOP] >UniRef100_Q921I9 Exosome complex exonuclease RRP41 n=2 Tax=Mus musculus RepID=EXOS4_MOUSE Length = 245 Score = 70.9 bits (172), Expect = 5e-11 Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455 ++ +E +S +G R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH + Sbjct: 1 MAGLELLSDQGYRIDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60 Query: 456 RRSELREEGALVVCE 500 RS + ALV C+ Sbjct: 61 SRSRALPDRALVNCQ 75 [53][TOP] >UniRef100_UPI0001758632 PREDICTED: similar to exosome complex exonuclease RRP41, putative n=1 Tax=Tribolium castaneum RepID=UPI0001758632 Length = 249 Score = 70.5 bits (171), Expect = 6e-11 Identities = 39/73 (53%), Positives = 49/73 (67%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470 E +S GLR DGRR ELRRI C+L V + DGSA E G TKVLAAV+GPH V ++ Sbjct: 6 ELLSKIGLRQDGRRADELRRIRCKLGVFTEPDGSAYLEQGLTKVLAAVYGPHQV-GFAKA 64 Query: 471 REEGALVVCE*SM 509 + + A+V C+ SM Sbjct: 65 QHDSAVVNCQFSM 77 [54][TOP] >UniRef100_Q6K293 Putative exosome component 4 n=1 Tax=Oryza sativa Japonica Group RepID=Q6K293_ORYSJ Length = 245 Score = 70.5 bits (171), Expect = 6e-11 Identities = 32/56 (57%), Positives = 46/56 (82%), Gaps = 1/56 (1%) Frame = +3 Query: 288 MEFVSP-EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV 452 ME+V+P G R+DGRRP E+R++ ++ V++ ADGSA+FEMGNT+V+AAV+GP V Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREV 56 [55][TOP] >UniRef100_A4ID90 Exosome complex exonuclease RRP41, putative n=1 Tax=Leishmania infantum RepID=A4ID90_LEIIN Length = 246 Score = 70.1 bits (170), Expect = 8e-11 Identities = 34/70 (48%), Positives = 42/70 (60%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470 E+VSP GLRLDGRRP E RR++ LS DGS +G +KV A VFGP + E Sbjct: 6 EYVSPAGLRLDGRRPLEARRMDIAFSTLSACDGSCDITLGQSKVCACVFGPRESLHKQEA 65 Query: 471 REEGALVVCE 500 + + LV CE Sbjct: 66 KHDKGLVTCE 75 [56][TOP] >UniRef100_Q4Q1B7 Exosome complex exonuclease RRP41, putative n=1 Tax=Leishmania major RepID=Q4Q1B7_LEIMA Length = 246 Score = 69.7 bits (169), Expect = 1e-10 Identities = 34/70 (48%), Positives = 42/70 (60%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470 E+VSP GLRLDGRRP E RR++ LS DGS +G +KV A VFGP + E Sbjct: 6 EYVSPAGLRLDGRRPLEARRMDIAFGTLSACDGSCDITLGQSKVCACVFGPRESLHKQEA 65 Query: 471 REEGALVVCE 500 + + LV CE Sbjct: 66 KHDKGLVTCE 75 [57][TOP] >UniRef100_C1BN11 Exosome complex exonuclease RRP41 n=1 Tax=Caligus rogercresseyi RepID=C1BN11_9MAXI Length = 246 Score = 69.7 bits (169), Expect = 1e-10 Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 1/53 (1%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLS-NADGSAIFEMGNTKVLAAVFGP 443 ME +S +GLRLDGR+ ELRR+ C+L S +ADGSA EMGNTKVLAAV+GP Sbjct: 1 MELLSDQGLRLDGRKSDELRRLRCRLGAFSWSADGSAYLEMGNTKVLAAVYGP 53 [58][TOP] >UniRef100_C3N5R3 Exosome complex exonuclease 1 n=1 Tax=Sulfolobus islandicus M.16.27 RepID=C3N5R3_SULIA Length = 245 Score = 69.7 bits (169), Expect = 1e-10 Identities = 32/51 (62%), Positives = 40/51 (78%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443 + + +G R+DGR+P ELR I +L VL NADGSAIFEMGNTK +AAV+GP Sbjct: 8 KLILEDGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGP 58 [59][TOP] >UniRef100_C3MVG4 Exosome complex exonuclease 1 n=2 Tax=Sulfolobus islandicus RepID=C3MVG4_SULIM Length = 245 Score = 69.7 bits (169), Expect = 1e-10 Identities = 32/51 (62%), Positives = 40/51 (78%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443 + + +G R+DGR+P ELR I +L VL NADGSAIFEMGNTK +AAV+GP Sbjct: 8 KLILEDGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGP 58 [60][TOP] >UniRef100_C3MQ46 Exosome complex exonuclease 1 n=3 Tax=Sulfolobus islandicus RepID=C3MQ46_SULIL Length = 245 Score = 69.7 bits (169), Expect = 1e-10 Identities = 32/51 (62%), Positives = 40/51 (78%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443 + + +G R+DGR+P ELR I +L VL NADGSAIFEMGNTK +AAV+GP Sbjct: 8 KLILEDGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGP 58 [61][TOP] >UniRef100_UPI00017968DC PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal RNA-processing protein 41) (Exosome component 4) (p12A) n=1 Tax=Equus caballus RepID=UPI00017968DC Length = 245 Score = 69.3 bits (168), Expect = 1e-10 Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455 ++ +E +S +G R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH + Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60 Query: 456 RRSELREEGALVVCE 500 R+ + ALV C+ Sbjct: 61 SRARALPDRALVNCQ 75 [62][TOP] >UniRef100_UPI00004A57C5 PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal RNA processing protein 41) (Exosome component 4) (p12A) isoform 1 n=1 Tax=Canis lupus familiaris RepID=UPI00004A57C5 Length = 245 Score = 69.3 bits (168), Expect = 1e-10 Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455 ++ +E +S +G R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH + Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60 Query: 456 RRSELREEGALVVCE 500 R+ + ALV C+ Sbjct: 61 SRARALPDRALVNCQ 75 [63][TOP] >UniRef100_A5E3M3 Exosome complex exonuclease RRP41 n=1 Tax=Lodderomyces elongisporus RepID=A5E3M3_LODEL Length = 244 Score = 69.3 bits (168), Expect = 1e-10 Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 1/72 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455 +S ME SPEGLR+DGRR ELRR C+++ N +DGS+ E GNTKV+ V GP T Sbjct: 1 MSRMELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVICTVIGPMEPT 60 Query: 456 RRSELREEGALV 491 R+++ ++ A V Sbjct: 61 SRAQMNQDRANV 72 [64][TOP] >UniRef100_Q9NPD3 Exosome complex exonuclease RRP41 n=1 Tax=Homo sapiens RepID=EXOS4_HUMAN Length = 245 Score = 69.3 bits (168), Expect = 1e-10 Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455 ++ +E +S +G R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH + Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60 Query: 456 RRSELREEGALVVCE 500 R+ + ALV C+ Sbjct: 61 SRARALPDRALVNCQ 75 [65][TOP] >UniRef100_Q7YRA3 Exosome complex exonuclease RRP41 n=1 Tax=Bos taurus RepID=EXOS4_BOVIN Length = 245 Score = 69.3 bits (168), Expect = 1e-10 Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455 ++ +E +S +G R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH + Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60 Query: 456 RRSELREEGALVVCE 500 R+ + ALV C+ Sbjct: 61 SRARALPDRALVNCQ 75 [66][TOP] >UniRef100_A4HPG8 Exosome complex exonuclease RRP41, putative n=1 Tax=Leishmania braziliensis RepID=A4HPG8_LEIBR Length = 246 Score = 68.9 bits (167), Expect = 2e-10 Identities = 33/70 (47%), Positives = 43/70 (61%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470 E+VSP GLRLDGRRP E RR++ LS DGS +G +KV A++FGP + E Sbjct: 6 EYVSPAGLRLDGRRPLEARRMDIVFGTLSACDGSCDITVGQSKVCASIFGPRESLHKQEA 65 Query: 471 REEGALVVCE 500 + + LV CE Sbjct: 66 KHDKVLVTCE 75 [67][TOP] >UniRef100_Q9UXC2 Probable exosome complex exonuclease 1 n=2 Tax=Sulfolobus solfataricus RepID=ECX1_SULSO Length = 248 Score = 68.6 bits (166), Expect = 2e-10 Identities = 32/51 (62%), Positives = 39/51 (76%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443 + + +G R DGR+P ELR I +L VL NADGSAIFEMGNTK +AAV+GP Sbjct: 11 KLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGP 61 [68][TOP] >UniRef100_Q4SLK0 Chromosome 15 SCAF14556, whole genome shotgun sequence n=1 Tax=Tetraodon nigroviridis RepID=Q4SLK0_TETNG Length = 291 Score = 68.2 bits (165), Expect = 3e-10 Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 16/93 (17%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455 ++ +E +S +G R+DGR+ ELR+I ++ V + ADGSA E GNTK LA V+GPH V Sbjct: 1 MAGLELLSDQGYRIDGRKATELRKIQARMGVFAQADGSAYLEQGNTKALAVVYGPHEVCV 60 Query: 456 ---------------RRSELREEGALVVCE*SM 509 RS R + A++ C+ SM Sbjct: 61 CVCVCVCVCVCQMRGSRSRARHDRAVINCQYSM 93 [69][TOP] >UniRef100_C4YA81 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4YA81_CLAL4 Length = 244 Score = 68.2 bits (165), Expect = 3e-10 Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 1/72 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455 +S ME SPEGLR+DGRR ELRR C+++ +N ADGS+ E GNTKV+ V GP + Sbjct: 1 MSRMELYSPEGLRVDGRRWNELRRFECKINTHANSADGSSYIEQGNTKVMCMVHGPKEPS 60 Query: 456 RRSELREEGALV 491 RS+ + A + Sbjct: 61 LRSQSNQNRATI 72 [70][TOP] >UniRef100_C4M2G1 3' exoribonuclease family protein n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4M2G1_ENTHI Length = 238 Score = 67.4 bits (163), Expect = 5e-10 Identities = 37/69 (53%), Positives = 46/69 (66%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 ME++SPEG RLDGRR E+R+ +++ LS ADGSA MGNT V A VFGP RR+ Sbjct: 1 MEYISPEGYRLDGRRTTEMRKCEMEINFLSTADGSARVRMGNTIVEAVVFGPLEGRRRN- 59 Query: 468 LREEGALVV 494 RE L+V Sbjct: 60 -REGAELMV 67 [71][TOP] >UniRef100_A8WQQ5 Putative exosome complex exonuclease RRP41 n=2 Tax=Caenorhabditis briggsae RepID=EXOS4_CAEBR Length = 240 Score = 67.4 bits (163), Expect = 5e-10 Identities = 32/71 (45%), Positives = 47/71 (66%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 M +S G R+DGRRP ++R IN +L + NA+GS E GNTKVL AV+GP+ ++ S+ Sbjct: 1 MSIISEHGFRMDGRRPAQIRNINTRLGLNRNAEGSCYLEHGNTKVLCAVYGPYE-SKASK 59 Query: 468 LREEGALVVCE 500 E+ +VC+ Sbjct: 60 RLEDRCAIVCQ 70 [72][TOP] >UniRef100_Q4JB27 Probable exosome complex exonuclease 1 n=1 Tax=Sulfolobus acidocaldarius RepID=ECX1_SULAC Length = 243 Score = 67.4 bits (163), Expect = 5e-10 Identities = 33/51 (64%), Positives = 39/51 (76%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443 + + GLR DGR+ ELR I +L VL NADGSAIFEMGNTKV+AAV+GP Sbjct: 8 KLILENGLRTDGRKLDELRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGP 58 [73][TOP] >UniRef100_Q5BZN7 SJCHGC06185 protein (Fragment) n=1 Tax=Schistosoma japonicum RepID=Q5BZN7_SCHJA Length = 251 Score = 67.0 bits (162), Expect = 7e-10 Identities = 30/64 (46%), Positives = 42/64 (65%) Frame = +3 Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGAL 488 G R+DGRRP ELRR++CQ N+DG GNTKV+A+V GPHA + + +GA Sbjct: 1 GRRVDGRRPNELRRVHCQFGS-GNSDGIVFLHQGNTKVIASVVGPHAPRTKGDGNPDGAT 59 Query: 489 VVCE 500 ++C+ Sbjct: 60 IICQ 63 [74][TOP] >UniRef100_UPI00005A29C8 PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal RNA processing protein 41) (Exosome component 4) (p12A) isoform 5 n=1 Tax=Canis lupus familiaris RepID=UPI00005A29C8 Length = 238 Score = 66.2 bits (160), Expect = 1e-09 Identities = 34/74 (45%), Positives = 46/74 (62%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458 ++ +E +S +G R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPH---- 56 Query: 459 RSELREEGALVVCE 500 E ALV C+ Sbjct: 57 --EASGHRALVNCQ 68 [75][TOP] >UniRef100_A3DMU9 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Staphylothermus marinus F1 RepID=A3DMU9_STAMF Length = 240 Score = 65.9 bits (159), Expect = 2e-09 Identities = 34/67 (50%), Positives = 42/67 (62%) Frame = +3 Query: 297 VSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 476 + +GLR DGR+P ELR I + VL NADGSA E G TKV+AAV+GP V R Sbjct: 7 IREDGLRHDGRKPNELRPIKMDVGVLKNADGSAYVEYGGTKVIAAVYGPREVYPRHLALP 66 Query: 477 EGALVVC 497 + AL+ C Sbjct: 67 DRALIRC 73 [76][TOP] >UniRef100_Q17533 Putative exosome complex exonuclease RRP41 n=1 Tax=Caenorhabditis elegans RepID=EXOS4_CAEEL Length = 240 Score = 65.9 bits (159), Expect = 2e-09 Identities = 32/71 (45%), Positives = 46/71 (64%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 M +S G R+DGRRP ++R IN +L + NA+GS E GNTKVL AV+GP+ + S+ Sbjct: 1 MNIISEHGFRIDGRRPAQIRNINTRLGLNRNAEGSCYLEHGNTKVLCAVYGPYE-GKSSK 59 Query: 468 LREEGALVVCE 500 E+ +VC+ Sbjct: 60 RIEDKCAIVCQ 70 [77][TOP] >UniRef100_B9WFQ9 Exosome complex exonuclease, putative (Ribosomal rna processing protein, putative) (3'-to-5' phosphorolytic exoribonuclease, putative) n=1 Tax=Candida dubliniensis CD36 RepID=B9WFQ9_CANDC Length = 240 Score = 65.5 bits (158), Expect = 2e-09 Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 1/67 (1%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVTRRS 464 ME SPEGLR+DGRR ELRR C+++ N +DGS+ E GNTKV+ V GP T RS Sbjct: 1 MELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVMCTVQGPIEPTLRS 60 Query: 465 ELREEGA 485 + E A Sbjct: 61 QQHSERA 67 [78][TOP] >UniRef100_B0ERA1 Exosome complex exonuclease RRP41, putative n=1 Tax=Entamoeba dispar SAW760 RepID=B0ERA1_ENTDI Length = 238 Score = 65.1 bits (157), Expect = 3e-09 Identities = 35/69 (50%), Positives = 46/69 (66%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 ME++SPEG RLDGRR E+R+ +++ L+ +DGSA MGNT V A VFGP RR+ Sbjct: 1 MEYISPEGYRLDGRRTTEMRKCEMEINFLNTSDGSARVRMGNTIVEAVVFGPLEGRRRN- 59 Query: 468 LREEGALVV 494 RE L+V Sbjct: 60 -REGAELMV 67 [79][TOP] >UniRef100_Q12ZB7 Archaeal exosome complex RNA-binding protein n=1 Tax=Methanococcoides burtonii DSM 6242 RepID=Q12ZB7_METBU Length = 343 Score = 65.1 bits (157), Expect = 3e-09 Identities = 34/68 (50%), Positives = 43/68 (63%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 ++F+ GLRLDGRR E+R + ++ VLS ADGS E GN KVLAAV+GP + R Sbjct: 6 VKFIDENGLRLDGRRVDEIRPMTVEMGVLSRADGSCYLEWGNNKVLAAVYGPRELHPRRL 65 Query: 468 LREEGALV 491 R ALV Sbjct: 66 QRPSEALV 73 [80][TOP] >UniRef100_A4YCV2 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Metallosphaera sedula DSM 5348 RepID=A4YCV2_METS5 Length = 245 Score = 65.1 bits (157), Expect = 3e-09 Identities = 29/61 (47%), Positives = 43/61 (70%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458 + + + +G RLDGRRP ELR + ++ VL NADGS++ E+GNTK++AAV+GP + Sbjct: 4 VQKPKLILDDGRRLDGRRPDELRPMKMEIGVLKNADGSSLVEVGNTKIIAAVYGPREMHP 63 Query: 459 R 461 R Sbjct: 64 R 64 [81][TOP] >UniRef100_A1RXQ6 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Thermofilum pendens Hrk 5 RepID=A1RXQ6_THEPD Length = 245 Score = 65.1 bits (157), Expect = 3e-09 Identities = 33/71 (46%), Positives = 43/71 (60%) Frame = +3 Query: 297 VSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 476 + G R+DGR P E+R + + VL NADGSA E+GN KVLAAV+GP R E Sbjct: 10 IDENGRRVDGRLPDEMRPLRVEAGVLKNADGSAYVELGNNKVLAAVYGPREPMPRHEALP 69 Query: 477 EGALVVCE*SM 509 + A++ C SM Sbjct: 70 DRAILKCRYSM 80 [82][TOP] >UniRef100_Q6BHJ0 DEHA2G18194p n=2 Tax=Debaryomyces hansenii RepID=Q6BHJ0_DEBHA Length = 245 Score = 64.3 bits (155), Expect = 4e-09 Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 1/72 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDV-LSNADGSAIFEMGNTKVLAAVFGPHAVT 455 +S ME SPEGLR+DGRR ELRR C+++ S++DGS+ E GNTK++ V GP + Sbjct: 1 MSRMELYSPEGLRIDGRRWNELRRFECRINTHPSSSDGSSYIEQGNTKIICMVQGPMEPS 60 Query: 456 RRSELREEGALV 491 RS+ A + Sbjct: 61 LRSQTNSSKASI 72 [83][TOP] >UniRef100_C5DCB7 KLTH0B01738p n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DCB7_LACTC Length = 245 Score = 64.3 bits (155), Expect = 4e-09 Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 1/72 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNA-DGSAIFEMGNTKVLAAVFGPHAVT 455 +S +E SPEGLR+DGRR ELRR+ C ++ +NA DGS+ E GN KV+ V GP Sbjct: 1 MSRLEIYSPEGLRVDGRRWNELRRLECSINTHANASDGSSYLEQGNNKVITLVTGPQEPK 60 Query: 456 RRSELREEGALV 491 RS++ A + Sbjct: 61 LRSQMNVTKATI 72 [84][TOP] >UniRef100_C4R4E4 3'-to-5' phosphorolytic exoribonuclease that is a subunit of the exosome n=1 Tax=Pichia pastoris GS115 RepID=C4R4E4_PICPG Length = 246 Score = 63.9 bits (154), Expect = 6e-09 Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 1/68 (1%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLS-NADGSAIFEMGNTKVLAAVFGPHAVTRRS 464 ME SPEGLR+DGRR ELRR C+++ ADGSA E GNTK++ + GPH TR Sbjct: 1 MELYSPEGLRVDGRRWNELRRFYCRINTHPIVADGSAYVEAGNTKIVCLLNGPHEPTRSQ 60 Query: 465 ELREEGAL 488 ++G+L Sbjct: 61 MNTQKGSL 68 [85][TOP] >UniRef100_UPI00015B5B6C PREDICTED: similar to ENSANGP00000009222 n=1 Tax=Nasonia vitripennis RepID=UPI00015B5B6C Length = 270 Score = 63.5 bits (153), Expect = 8e-09 Identities = 30/49 (61%), Positives = 34/49 (69%) Frame = +3 Query: 300 SPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446 S GLR DGRRP ELRRI ++ V ADGSA E G TK+LA V+GPH Sbjct: 8 SQGGLRADGRRPLELRRIRLRMGVFGQADGSAYLEQGKTKILATVYGPH 56 [86][TOP] >UniRef100_Q5AMR4 Likely exosome component Ski6p n=1 Tax=Candida albicans RepID=Q5AMR4_CANAL Length = 240 Score = 63.5 bits (153), Expect = 8e-09 Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVTRRS 464 ME SPEGLR+DGRR ELRR C+++ N +DGS+ E GNTKV+ V GP RS Sbjct: 1 MELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVMCTVQGPIEPALRS 60 Query: 465 ELREEGA 485 + E A Sbjct: 61 QQHSERA 67 [87][TOP] >UniRef100_C4YHN7 Exosome complex exonuclease RRP41 n=1 Tax=Candida albicans RepID=C4YHN7_CANAL Length = 240 Score = 63.5 bits (153), Expect = 8e-09 Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVTRRS 464 ME SPEGLR+DGRR ELRR C+++ N +DGS+ E GNTKV+ V GP RS Sbjct: 1 MELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVMCTVQGPIEPALRS 60 Query: 465 ELREEGA 485 + E A Sbjct: 61 QQHSERA 67 [88][TOP] >UniRef100_B8D6B9 Probable exosome complex exonuclease 1 n=1 Tax=Desulfurococcus kamchatkensis 1221n RepID=B8D6B9_DESK1 Length = 242 Score = 63.5 bits (153), Expect = 8e-09 Identities = 29/46 (63%), Positives = 36/46 (78%) Frame = +3 Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443 +GLR+DGR+P ELR + L VL NA+GSA+ E GNTK LAAV+GP Sbjct: 10 DGLRIDGRKPEELRPVRIALGVLKNANGSALVEYGNTKALAAVYGP 55 [89][TOP] >UniRef100_Q8TYC1 Probable exosome complex exonuclease 1 n=1 Tax=Methanopyrus kandleri RepID=ECX1_METKA Length = 239 Score = 63.5 bits (153), Expect = 8e-09 Identities = 30/65 (46%), Positives = 44/65 (67%) Frame = +3 Query: 297 VSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 476 +S +GLRLDGR+P E+R + Q VL ADGSA E+G K++AAV+GP + R + + Sbjct: 9 ISEDGLRLDGRKPDEMRPLKIQAGVLKRADGSAYLELGANKIVAAVYGPRELHPRHKQKP 68 Query: 477 EGALV 491 + A+V Sbjct: 69 DRAVV 73 [90][TOP] >UniRef100_UPI0000DB6F09 PREDICTED: similar to putative exosome complex exonuclease RRP41 n=1 Tax=Apis mellifera RepID=UPI0000DB6F09 Length = 268 Score = 63.2 bits (152), Expect = 1e-08 Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 3/70 (4%) Frame = +3 Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHA---VTRRSELREE 479 GLRLDGRR ELR+I ++ V ADGSA E GNTK+L V+GPH T RS + Sbjct: 12 GLRLDGRRALELRQIRIKMGVFGQADGSAYIEHGNTKILVTVYGPHQPRNSTGRSTSKIT 71 Query: 480 GALVVCE*SM 509 +V C+ SM Sbjct: 72 KGIVNCQYSM 81 [91][TOP] >UniRef100_B5IEJ8 Exosome complex exonuclease 1 n=1 Tax=Aciduliprofundum boonei T469 RepID=B5IEJ8_9EURY Length = 243 Score = 63.2 bits (152), Expect = 1e-08 Identities = 31/76 (40%), Positives = 44/76 (57%) Frame = +3 Query: 282 SSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461 S ++ + GLR+DGR P +LR I ++ VL ADGSA E G K++AAV+GPH + Sbjct: 3 SDIKLIDDNGLRIDGRLPNQLRPIKMEVGVLKRADGSAFIEWGGNKIIAAVYGPHEAYPK 62 Query: 462 SELREEGALVVCE*SM 509 + A+V SM Sbjct: 63 HVQEADRAIVRARYSM 78 [92][TOP] >UniRef100_Q6CRE8 KLLA0D09625p n=1 Tax=Kluyveromyces lactis RepID=Q6CRE8_KLULA Length = 245 Score = 62.8 bits (151), Expect = 1e-08 Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455 +S E SPEGLR+DGRR ELR NC ++ N ADGS+ E GN K++ V GP + Sbjct: 1 MSRFEIYSPEGLRVDGRRWNELRSFNCSINTHPNAADGSSYLEQGNNKIITLVAGPQEPS 60 Query: 456 RRSELREEGA 485 RS++ + A Sbjct: 61 SRSQVNTKQA 70 [93][TOP] >UniRef100_C5M243 Exosome complex exonuclease RRP41 n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M243_CANTT Length = 240 Score = 62.8 bits (151), Expect = 1e-08 Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 1/67 (1%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVTRRS 464 ME SPEGLR+DGRR ELRR C+++ N +DGS+ E GNTKV+ V GP RS Sbjct: 1 MELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVVCTVQGPIEPQLRS 60 Query: 465 ELREEGA 485 + E A Sbjct: 61 QQHSEHA 67 [94][TOP] >UniRef100_C5E0D5 ZYRO0G11814p n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5E0D5_ZYGRC Length = 245 Score = 62.8 bits (151), Expect = 1e-08 Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 1/72 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455 +S E SPEGLR+DGRR ELRR +C ++ S+ ADGS+ E GN K++ V GP + Sbjct: 1 MSRFEIYSPEGLRVDGRRWNELRRFDCSINTHSHAADGSSYLEQGNNKIITLVKGPKEPS 60 Query: 456 RRSELREEGALV 491 RS++ AL+ Sbjct: 61 LRSQMDPTKALL 72 [95][TOP] >UniRef100_Q4DGF6 Exosome complex exonuclease RRP41A, putative (Fragment) n=1 Tax=Trypanosoma cruzi RepID=Q4DGF6_TRYCR Length = 195 Score = 61.6 bits (148), Expect = 3e-08 Identities = 29/70 (41%), Positives = 40/70 (57%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470 E++SP GLRLDGRRP+E RR+ + + DG G V A+V+GP VT R E Sbjct: 6 EYISPAGLRLDGRRPQESRRMTLEFGKVLGCDGCCTVMSGLATVCASVYGPREVTNRLES 65 Query: 471 REEGALVVCE 500 + ++ CE Sbjct: 66 KYNECIITCE 75 [96][TOP] >UniRef100_C5A2B9 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus gammatolerans EJ3 RepID=ECX1_THEGJ Length = 249 Score = 61.6 bits (148), Expect = 3e-08 Identities = 29/68 (42%), Positives = 44/68 (64%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 ++ + G R+DGRR ELR+I+ ++ VL NADGSA E G K+LAAV+GP + + Sbjct: 8 LKLIDENGRRIDGRRKYELRKIHMEVGVLKNADGSAYIEWGKNKILAAVYGPREIHPKHL 67 Query: 468 LREEGALV 491 R + A++ Sbjct: 68 QRPDTAVL 75 [97][TOP] >UniRef100_Q75C81 ACR035Wp n=1 Tax=Eremothecium gossypii RepID=Q75C81_ASHGO Length = 246 Score = 61.2 bits (147), Expect = 4e-08 Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDV-LSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 E SPEGLRLDGRR ELRR C ++ + ADGS+ E GN K++ V GPH RS+ Sbjct: 5 EIYSPEGLRLDGRRWNELRRFECSINTHPTAADGSSYLEQGNNKLITLVTGPHEPALRSQ 64 Query: 468 LREEGA 485 + A Sbjct: 65 VNPSKA 70 [98][TOP] >UniRef100_A7TII5 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TII5_VANPO Length = 246 Score = 61.2 bits (147), Expect = 4e-08 Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 1/65 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNA-DGSAIFEMGNTKVLAAVFGPHAVT 455 +S E SPEGLRLDGRR ELRR C ++ ++A DGS+ E GN K++ V GP Sbjct: 1 MSRFELYSPEGLRLDGRRWNELRRFECSINTHAHASDGSSYLEQGNNKIVTLVKGPQEPI 60 Query: 456 RRSEL 470 RS+L Sbjct: 61 LRSQL 65 [99][TOP] >UniRef100_C5KIM5 Exosome complex exonuclease RRP41, putative n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KIM5_9ALVE Length = 248 Score = 60.8 bits (146), Expect = 5e-08 Identities = 31/66 (46%), Positives = 41/66 (62%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470 EF++ EG RLDGRRP ELR + ++ +ADGSA + G TKV+A VFGP + S Sbjct: 6 EFLTYEGFRLDGRRPNELRHLTLKIGDAPSADGSATLQQGLTKVVAHVFGPRPLQAASVG 65 Query: 471 REEGAL 488 R G + Sbjct: 66 RAAGTM 71 [100][TOP] >UniRef100_C4Q0C5 Ribonuclease pH related n=1 Tax=Schistosoma mansoni RepID=C4Q0C5_SCHMA Length = 258 Score = 60.8 bits (146), Expect = 5e-08 Identities = 28/64 (43%), Positives = 40/64 (62%) Frame = +3 Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGAL 488 G R+DGRRP E+RR++CQ +DG GNTKV+A+V GPHA + + +GA Sbjct: 8 GRRVDGRRPNEIRRVDCQFGS-GYSDGIVFLHQGNTKVIASVVGPHAPRVKGDGTPDGAT 66 Query: 489 VVCE 500 + C+ Sbjct: 67 ITCQ 70 [101][TOP] >UniRef100_A7RQ94 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RQ94_NEMVE Length = 268 Score = 60.8 bits (146), Expect = 5e-08 Identities = 32/68 (47%), Positives = 41/68 (60%) Frame = +3 Query: 297 VSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 476 + +G R DGRRP ELR + + V+S A GSA EM NTKV+ A++GP RR E Sbjct: 30 IRKDGCRQDGRRPDELRPMFLRAGVVSQAKGSAYIEMKNTKVICAIYGPREAPRRQEFSM 89 Query: 477 EGALVVCE 500 +G L CE Sbjct: 90 KGRL-TCE 96 [102][TOP] >UniRef100_Q4DZV2 Ribosomal RNA processing protein 41A, putative n=1 Tax=Trypanosoma cruzi RepID=Q4DZV2_TRYCR Length = 252 Score = 60.5 bits (145), Expect = 6e-08 Identities = 28/70 (40%), Positives = 40/70 (57%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470 E+++P GLRLDGRRP+E RR+ + + DG G V A+V+GP VT R E Sbjct: 6 EYINPAGLRLDGRRPQESRRMTLEFGKVLGCDGCCTVMSGLATVCASVYGPREVTNRLES 65 Query: 471 REEGALVVCE 500 + ++ CE Sbjct: 66 KYNECIITCE 75 [103][TOP] >UniRef100_C7DI01 3' exoribonuclease n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DI01_9EURY Length = 246 Score = 60.5 bits (145), Expect = 6e-08 Identities = 32/68 (47%), Positives = 41/68 (60%) Frame = +3 Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGA 485 +G RLDGR ELR + + +L+NA+GSA E GN KVLAAV+GP T R A Sbjct: 13 DGKRLDGRDFNELRPLKIEAGILANANGSAYLEWGNNKVLAAVYGPKEATPRHLADTNKA 72 Query: 486 LVVCE*SM 509 ++ C SM Sbjct: 73 IIKCRYSM 80 [104][TOP] >UniRef100_B7R2K9 Exosome complex exonuclease 1 n=1 Tax=Thermococcus sp. AM4 RepID=B7R2K9_9EURY Length = 248 Score = 60.5 bits (145), Expect = 6e-08 Identities = 28/68 (41%), Positives = 44/68 (64%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 ++ + G R+DGR+ ELR+I+ ++ VL NADGSA E G K+LAAV+GP + + Sbjct: 7 LKLIDENGRRIDGRKKYELRKIHMEVGVLKNADGSAYIEWGKNKILAAVYGPREIHPKHL 66 Query: 468 LREEGALV 491 R + A++ Sbjct: 67 QRPDTAVL 74 [105][TOP] >UniRef100_A5DGL1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii RepID=A5DGL1_PICGU Length = 242 Score = 60.1 bits (144), Expect = 8e-08 Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNAD-GSAIFEMGNTKVLAAVFGPHAVT 455 +S +E SPEGLR+DGRR ELRR C+++ N+ GS+ E GNTKV+ V GP Sbjct: 1 MSRLELYSPEGLRVDGRRWNELRRFECKINTHPNSSTGSSYVEQGNTKVICMVEGPSEPE 60 Query: 456 RRSEL 470 RS++ Sbjct: 61 TRSQV 65 [106][TOP] >UniRef100_A3GGM6 Predicted protein n=1 Tax=Pichia stipitis RepID=A3GGM6_PICST Length = 241 Score = 60.1 bits (144), Expect = 8e-08 Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 1/67 (1%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVTRRS 464 ME SPEGLR+DGRR E+R C+++ N +DGS+ E GNTKV+ V GP RS Sbjct: 1 MELYSPEGLRIDGRRWNEIRNFECRINTHPNSSDGSSYIEQGNTKVICVVQGPMEPALRS 60 Query: 465 ELREEGA 485 + A Sbjct: 61 QANSNEA 67 [107][TOP] >UniRef100_Q8PTT8 Probable exosome complex exonuclease 1 n=1 Tax=Methanosarcina mazei RepID=ECX1_METMA Length = 493 Score = 60.1 bits (144), Expect = 8e-08 Identities = 28/69 (40%), Positives = 41/69 (59%) Frame = +3 Query: 285 SMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRS 464 ++ ++ +GLRLDGRR E+R + ++ VLS ADGS E G K+L VFGP R Sbjct: 7 NLTLITDDGLRLDGRRADEIRPMKIEVGVLSRADGSCYLEWGRNKILVGVFGPREAHPRR 66 Query: 465 ELREEGALV 491 R + A++ Sbjct: 67 SQRADSAVI 75 [108][TOP] >UniRef100_B1L6N7 Exosome complex exonuclease 1 n=1 Tax=Candidatus Korarchaeum cryptofilum OPF8 RepID=B1L6N7_KORCO Length = 248 Score = 59.7 bits (143), Expect = 1e-07 Identities = 29/65 (44%), Positives = 40/65 (61%) Frame = +3 Query: 297 VSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 476 ++ EG+R DGR P E+R I + VL ADGSA E G ++LAAVFGP V + + Sbjct: 13 ITEEGIRTDGRLPHEMRPIKMMVGVLEKADGSAFVEWGGNRILAAVFGPREVHPKHMVLP 72 Query: 477 EGALV 491 + AL+ Sbjct: 73 DRALI 77 [109][TOP] >UniRef100_A2BKC0 Probable exosome complex exonuclease 1 n=1 Tax=Hyperthermus butylicus DSM 5456 RepID=ECX1_HYPBU Length = 255 Score = 59.3 bits (142), Expect = 1e-07 Identities = 29/62 (46%), Positives = 40/62 (64%) Frame = +3 Query: 312 LRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGALV 491 +R DGR P +LR I ++ VLSNADGSA+ E G T+V+AAV+GP R + A++ Sbjct: 24 IRHDGRLPEQLRPIRMEVGVLSNADGSALVEYGGTRVIAAVYGPREAHPRHVALPDRAII 83 Query: 492 VC 497 C Sbjct: 84 RC 85 [110][TOP] >UniRef100_UPI000151B3FA hypothetical protein PGUG_02412 n=1 Tax=Pichia guilliermondii ATCC 6260 RepID=UPI000151B3FA Length = 242 Score = 58.9 bits (141), Expect = 2e-07 Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNA-DGSAIFEMGNTKVLAAVFGPHAVT 455 +S +E SPEGLR+DGRR ELRR C+++ N+ GS+ E GNTKV+ V GP Sbjct: 1 MSRLELYSPEGLRVDGRRWNELRRFECKINTHPNSLTGSSYVEQGNTKVICMVEGPLEPE 60 Query: 456 RRSEL 470 RS++ Sbjct: 61 TRSQV 65 [111][TOP] >UniRef100_Q5JIR6 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus kodakarensis RepID=ECX1_PYRKO Length = 249 Score = 58.9 bits (141), Expect = 2e-07 Identities = 29/68 (42%), Positives = 42/68 (61%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 ++ + G R+DGR+ ELR I ++ VL NADGSA E G KVLAAV+GP + + Sbjct: 8 LKLIDENGKRIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKVLAAVYGPREIHPKHL 67 Query: 468 LREEGALV 491 R + A++ Sbjct: 68 QRPDRAIL 75 [112][TOP] >UniRef100_B5IVS6 Exosome complex exonuclease 1 n=1 Tax=Thermococcus barophilus MP RepID=B5IVS6_9EURY Length = 247 Score = 58.5 bits (140), Expect = 2e-07 Identities = 28/68 (41%), Positives = 42/68 (61%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 ++ + G R+DGR+ ELR I ++ VL NADGSA E G K+LAAV+GP + + Sbjct: 8 IKLIDENGRRIDGRKKYELRPIKMEVGVLKNADGSAYIEWGKNKILAAVYGPREIHPKHL 67 Query: 468 LREEGALV 491 R + A++ Sbjct: 68 QRPDRAIL 75 [113][TOP] >UniRef100_B6YSI2 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus onnurineus NA1 RepID=ECX1_THEON Length = 249 Score = 58.5 bits (140), Expect = 2e-07 Identities = 28/68 (41%), Positives = 42/68 (61%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 ++ + G R+DGR+ ELR I ++ VL NADGSA E G K+LAAV+GP + + Sbjct: 8 LKLIDENGRRIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKILAAVYGPREIHPKHL 67 Query: 468 LREEGALV 491 R + A++ Sbjct: 68 QRPDRAIL 75 [114][TOP] >UniRef100_B9IKJ0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IKJ0_POPTR Length = 243 Score = 58.2 bits (139), Expect = 3e-07 Identities = 30/63 (47%), Positives = 42/63 (66%) Frame = +3 Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGA 485 E R DGR P +LR ++C +VL A GSA + G+TKVLAAV+GP A T+++E E+ Sbjct: 2 ESDRDDGRSPSQLRPLSCARNVLHRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKAC 61 Query: 486 LVV 494 + V Sbjct: 62 IEV 64 [115][TOP] >UniRef100_Q6FSM7 Strain CBS138 chromosome G complete sequence n=1 Tax=Candida glabrata RepID=Q6FSM7_CANGA Length = 246 Score = 58.2 bits (139), Expect = 3e-07 Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 1/72 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455 +S +E SPEGLRLDGRR ELRR ++ + ADGS+ E GN KV+ V GP T Sbjct: 1 MSRVEIYSPEGLRLDGRRWNELRRFESAINTHPHAADGSSYLEQGNNKVITLVKGPKEPT 60 Query: 456 RRSELREEGALV 491 +S++ + A++ Sbjct: 61 LKSQMDIQKAIL 72 [116][TOP] >UniRef100_Q2NEX5 Putative exosome complex, exonuclease 1 subunit n=1 Tax=Methanosphaera stadtmanae DSM 3091 RepID=Q2NEX5_METST Length = 232 Score = 58.2 bits (139), Expect = 3e-07 Identities = 27/68 (39%), Positives = 42/68 (61%) Frame = +3 Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGA 485 E +R DGR LR + ++ VL+NADGSA E GN K+L V+GP + + + +GA Sbjct: 4 EFIRKDGRAYNTLRNMKMEVGVLNNADGSAYIECGNNKILVGVYGPREIHSKKHSKPDGA 63 Query: 486 LVVCE*SM 509 ++ C+ +M Sbjct: 64 VLRCKYNM 71 [117][TOP] >UniRef100_A0B8W3 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Methanosaeta thermophila PT RepID=A0B8W3_METTP Length = 245 Score = 58.2 bits (139), Expect = 3e-07 Identities = 29/52 (55%), Positives = 36/52 (69%) Frame = +3 Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461 +G+RLDGRR ELR I ++ VL ADGS EMG+ KV+AAV+GP V R Sbjct: 9 DGIRLDGRRFDELRPIKMEVGVLKRADGSCYMEMGDNKVIAAVYGPREVHPR 60 [118][TOP] >UniRef100_C8S7M6 Exosome complex exonuclease 1 n=1 Tax=Ferroglobus placidus DSM 10642 RepID=C8S7M6_FERPL Length = 245 Score = 58.2 bits (139), Expect = 3e-07 Identities = 28/49 (57%), Positives = 33/49 (67%) Frame = +3 Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV 452 +G R+DGR P ELR I + VL NADGS EMG KV+AAV+GP V Sbjct: 10 DGRRIDGRLPDELRPIKIEAGVLKNADGSCYLEMGKNKVMAAVYGPRKV 58 [119][TOP] >UniRef100_O42872 Exosome complex component ski6 n=1 Tax=Schizosaccharomyces pombe RepID=RRP41_SCHPO Length = 242 Score = 58.2 bits (139), Expect = 3e-07 Identities = 31/74 (41%), Positives = 43/74 (58%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458 +S E +S EGLR DGRR E+R C++ + + +GSA E+GNTKVL V GP Sbjct: 1 MSHFEILSLEGLRNDGRRWDEMRNFQCRIGIEPSENGSAFIELGNTKVLCIVDGPSEPVI 60 Query: 459 RSELREEGALVVCE 500 +S+ R + V E Sbjct: 61 KSKARADRTFVNVE 74 [120][TOP] >UniRef100_O29757 Probable exosome complex exonuclease 1 n=1 Tax=Archaeoglobus fulgidus RepID=ECX1_ARCFU Length = 258 Score = 58.2 bits (139), Expect = 3e-07 Identities = 30/52 (57%), Positives = 34/52 (65%) Frame = +3 Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461 +GLRLDGR+ ELR I + VL ADGS EMG KV+AAVFGP V R Sbjct: 14 DGLRLDGRKFDELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPR 65 [121][TOP] >UniRef100_Q01E66 Putative exonuclease RRP41 (ISS) n=1 Tax=Ostreococcus tauri RepID=Q01E66_OSTTA Length = 321 Score = 57.8 bits (138), Expect = 4e-07 Identities = 34/72 (47%), Positives = 43/72 (59%) Frame = +3 Query: 282 SSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461 ++ME+VS EGLRLDGRR E+RR + + DGSA FE+GNT + V GP R+ Sbjct: 50 ATMEYVSFEGLRLDGRRANEIRRPRHAFAIDAQCDGSARFELGNTVIECRVDGPS--ERK 107 Query: 462 SELREEGALVVC 497 EEGA C Sbjct: 108 FGGAEEGASEAC 119 [122][TOP] >UniRef100_Q469M3 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Methanosarcina barkeri str. Fusaro RepID=Q469M3_METBF Length = 501 Score = 57.8 bits (138), Expect = 4e-07 Identities = 28/67 (41%), Positives = 39/67 (58%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470 + ++ +GLRLDGR E+R + ++ VLS ADGS E G KVL VFGP R Sbjct: 7 KLITDDGLRLDGRHADEIRPMKIEIGVLSRADGSCYLEWGRNKVLVGVFGPREAHPRRSQ 66 Query: 471 REEGALV 491 R + A++ Sbjct: 67 RADTAVI 73 [123][TOP] >UniRef100_A0RXU1 Probable exosome complex exonuclease 1 n=1 Tax=Cenarchaeum symbiosum RepID=ECX1_CENSY Length = 243 Score = 57.8 bits (138), Expect = 4e-07 Identities = 28/76 (36%), Positives = 43/76 (56%) Frame = +3 Query: 270 GEHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHA 449 G + + + G+R DGR+ E RR+ VL+NA+GSA E G+ K+LA +FGP Sbjct: 2 GGRDTDVVLLDENGIRCDGRKISETRRVEITAGVLNNANGSAYIEFGDNKILAGIFGPRD 61 Query: 450 VTRRSELREEGALVVC 497 V + +R E ++ C Sbjct: 62 VHPKHMVRTETGILRC 77 [124][TOP] >UniRef100_Q9YC03 Probable exosome complex exonuclease 1 n=1 Tax=Aeropyrum pernix RepID=ECX1_AERPE Length = 246 Score = 57.8 bits (138), Expect = 4e-07 Identities = 27/52 (51%), Positives = 36/52 (69%) Frame = +3 Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461 +G R DGR P +LR + Q+ +L NADGSA+ E G T+VLAAV+GP +R Sbjct: 14 DGRRHDGRLPEDLRPVRMQVGILHNADGSALVEFGRTRVLAAVYGPREPHQR 65 [125][TOP] >UniRef100_Q38AL8 Exosome complex exonuclease RRP41A n=1 Tax=Trypanosoma brucei RepID=Q38AL8_9TRYP Length = 252 Score = 57.4 bits (137), Expect = 5e-07 Identities = 27/70 (38%), Positives = 39/70 (55%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470 E+++P GLRLDGRRP E RR+ + +S DG G + V A V+GP V+ R E Sbjct: 6 EYINPAGLRLDGRRPNEPRRLALEFGKISGCDGCCTVVSGLSHVCATVYGPREVSNRLEG 65 Query: 471 REEGALVVCE 500 + + C+ Sbjct: 66 KYNEVTITCD 75 [126][TOP] >UniRef100_B2WKB1 Exosome complex exonuclease RRP41 n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2WKB1_PYRTR Length = 250 Score = 57.4 bits (137), Expect = 5e-07 Identities = 27/45 (60%), Positives = 33/45 (73%) Frame = +3 Query: 312 LRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446 LRLDGRR ELRRI+ Q+ + ADGS+ E GNTK+L +V GPH Sbjct: 13 LRLDGRRWNELRRIHAQISTQAAADGSSYLEQGNTKILVSVTGPH 57 [127][TOP] >UniRef100_Q2HRD9 Peptidase S8 and S53, subtilisin, kexin, sedolisin; 3 exoribonuclease n=1 Tax=Medicago truncatula RepID=Q2HRD9_MEDTR Length = 241 Score = 57.0 bits (136), Expect = 7e-07 Identities = 29/60 (48%), Positives = 39/60 (65%) Frame = +3 Query: 315 RLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGALVV 494 R DGR P +LR + C VL A GSA + G TKVLAAV+GP A T+++E E+ ++ V Sbjct: 5 RPDGRSPNQLRPLACSHSVLHRAHGSATWAQGETKVLAAVYGPKAGTKKNENPEKASIEV 64 [128][TOP] >UniRef100_B3LI42 Exosome complex exonuclease RRP41 n=1 Tax=Saccharomyces cerevisiae RM11-1a RepID=B3LI42_YEAS1 Length = 246 Score = 57.0 bits (136), Expect = 7e-07 Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455 +S +E SPEGLRLDGRR ELRR ++ + ADGS+ E GN K++ V GP Sbjct: 1 MSRLEIYSPEGLRLDGRRWNELRRFESSINTHPHAADGSSYMEQGNNKIITLVKGPKEPR 60 Query: 456 RRSELREEGALV 491 +S++ AL+ Sbjct: 61 LKSQMDTSKALL 72 [129][TOP] >UniRef100_P46948 Exosome complex component SKI6 n=5 Tax=Saccharomyces cerevisiae RepID=RRP41_YEAST Length = 246 Score = 57.0 bits (136), Expect = 7e-07 Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455 +S +E SPEGLRLDGRR ELRR ++ + ADGS+ E GN K++ V GP Sbjct: 1 MSRLEIYSPEGLRLDGRRWNELRRFESSINTHPHAADGSSYMEQGNNKIITLVKGPKEPR 60 Query: 456 RRSELREEGALV 491 +S++ AL+ Sbjct: 61 LKSQMDTSKALL 72 [130][TOP] >UniRef100_Q0W2Y8 Putative exosome complex exonuclease 1 n=1 Tax=uncultured methanogenic archaeon RC-I RepID=Q0W2Y8_UNCMA Length = 253 Score = 56.6 bits (135), Expect = 9e-07 Identities = 32/71 (45%), Positives = 40/71 (56%) Frame = +3 Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458 +S E + +G RLDGR P +LR I Q VL ADGS E G KV+AAV+GP V Sbjct: 1 MSKPEKLIVDGKRLDGRGPFDLRPIKFQAGVLKRADGSCYLEFGGNKVMAAVYGPREVHP 60 Query: 459 RSELREEGALV 491 R + A+V Sbjct: 61 RHLQQASNAIV 71 [131][TOP] >UniRef100_Q8U0L9 Probable exosome complex exonuclease 1 n=1 Tax=Pyrococcus furiosus RepID=ECX1_PYRFU Length = 250 Score = 56.6 bits (135), Expect = 9e-07 Identities = 27/68 (39%), Positives = 42/68 (61%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467 ++ + G RLDGR+ ELR I ++ VL NA+GSA E G K++AAV+GP + + Sbjct: 8 LKLIDENGRRLDGRKKYELRPIKMKVGVLKNANGSAYIEWGKNKIIAAVYGPREIHPKHL 67 Query: 468 LREEGALV 491 R + A++ Sbjct: 68 QRPDRAIL 75 [132][TOP] >UniRef100_D0A3H8 Exosome complex exonuclease RRP41A (Rrp41p homologue, putative) n=1 Tax=Trypanosoma brucei gambiense DAL972 RepID=D0A3H8_TRYBG Length = 252 Score = 56.2 bits (134), Expect = 1e-06 Identities = 26/70 (37%), Positives = 39/70 (55%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470 E+++P GLRLDGRRP E RR+ + +S DG G + V A V+GP V+ R + Sbjct: 6 EYINPAGLRLDGRRPNEPRRLALEFGKISGCDGCCTVVSGLSHVCATVYGPREVSNRLDG 65 Query: 471 REEGALVVCE 500 + + C+ Sbjct: 66 KYNEVTITCD 75 [133][TOP] >UniRef100_Q0V679 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum RepID=Q0V679_PHANO Length = 251 Score = 56.2 bits (134), Expect = 1e-06 Identities = 27/44 (61%), Positives = 33/44 (75%) Frame = +3 Query: 312 LRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443 LRLDGRR ELRRI+ Q+ + ADGS+ EMGNTK+L +V GP Sbjct: 13 LRLDGRRWNELRRIHAQISTQAAADGSSYLEMGNTKILVSVTGP 56 [134][TOP] >UniRef100_C6A456 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus sibiricus MM 739 RepID=C6A456_THESM Length = 246 Score = 56.2 bits (134), Expect = 1e-06 Identities = 24/55 (43%), Positives = 37/55 (67%) Frame = +3 Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV 452 ++ + G R+DGR+ ELR+I ++ VL +ADGSA E G K++AAV+GP + Sbjct: 7 LKLIDENGYRVDGRKKYELRKIKMEVGVLKSADGSAYVEWGKNKIMAAVYGPREI 61 [135][TOP] >UniRef100_B6K3J3 Exosome complex exonuclease RRP41 n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6K3J3_SCHJY Length = 243 Score = 55.8 bits (133), Expect = 2e-06 Identities = 29/73 (39%), Positives = 42/73 (57%) Frame = +3 Query: 282 SSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461 S E +S EGLR DGRR E+R +C++ V A GS+ + GNT+VL V GP + Sbjct: 3 SHYEVISAEGLRQDGRRWNEMREFDCRIGVEKTAHGSSFIQHGNTRVLCNVNGPSEPYIK 62 Query: 462 SELREEGALVVCE 500 + ++E A + E Sbjct: 63 GKSKQEKAFINVE 75 [136][TOP] >UniRef100_O59223 Probable exosome complex exonuclease 1 n=1 Tax=Pyrococcus horikoshii RepID=ECX1_PYRHO Length = 249 Score = 55.8 bits (133), Expect = 2e-06 Identities = 27/73 (36%), Positives = 43/73 (58%) Frame = +3 Query: 273 EHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV 452 E ++ + G R+DGR+ ELR I ++ VL NA+GSA E G K++AAV+GP + Sbjct: 3 EKPEGLKLIDENGRRIDGRKKYELRPIKMKVGVLKNANGSAYIEWGRNKIIAAVYGPREL 62 Query: 453 TRRSELREEGALV 491 + R + A++ Sbjct: 63 HSKHLQRPDRAIL 75 [137][TOP] >UniRef100_Q9V119 Probable exosome complex exonuclease 1 n=1 Tax=Pyrococcus abyssi RepID=ECX1_PYRAB Length = 249 Score = 55.8 bits (133), Expect = 2e-06 Identities = 27/73 (36%), Positives = 43/73 (58%) Frame = +3 Query: 273 EHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV 452 E ++ + G R+DGR+ ELR I ++ VL NA+GSA E G K++AAV+GP + Sbjct: 3 EKPEGLKLIDENGRRIDGRKKYELRPIKMEVGVLKNANGSAYIEWGKNKIIAAVYGPREL 62 Query: 453 TRRSELREEGALV 491 + R + A++ Sbjct: 63 HPKHLQRPDRAIL 75 [138][TOP] >UniRef100_Q6CA11 YALI0D06776p n=1 Tax=Yarrowia lipolytica RepID=Q6CA11_YARLI Length = 287 Score = 55.5 bits (132), Expect = 2e-06 Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 1/91 (1%) Frame = +3 Query: 225 LPKFNTLYTQRSGD*GEHISSMEFVSPEGLRLDGRRPRELRRINCQLDV-LSNADGSAIF 401 LP +++ TQ S E SPEGLR DGRR E+R +C+++ ++ADGS+ Sbjct: 38 LPSYSSPLTQ---------SRHEIYSPEGLRTDGRRWNEIRNFDCKINTHPTSADGSSYV 88 Query: 402 EMGNTKVLAAVFGPHAVTRRSELREEGALVV 494 E G+TKV+ V GP R + + V Sbjct: 89 EWGHTKVVCTVDGPREPDNRQNTTDRAVISV 119 [139][TOP] >UniRef100_B3TBC6 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured marine crenarchaeote HF4000_APKG8O8 RepID=B3TBC6_9ARCH Length = 245 Score = 55.5 bits (132), Expect = 2e-06 Identities = 26/61 (42%), Positives = 35/61 (57%) Frame = +3 Query: 270 GEHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHA 449 G + + + G+R DGR+ E R++ + VL NADGSA E G K+LA VFGP Sbjct: 2 GGRETDLVLLDENGIRCDGRKVNETRKVTIKAGVLKNADGSAYIEFGGNKILAGVFGPRD 61 Query: 450 V 452 V Sbjct: 62 V 62 [140][TOP] >UniRef100_B3TAN7 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured marine crenarchaeote HF4000_APKG8G2 RepID=B3TAN7_9ARCH Length = 245 Score = 55.5 bits (132), Expect = 2e-06 Identities = 26/61 (42%), Positives = 36/61 (59%) Frame = +3 Query: 270 GEHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHA 449 G + + + G+R DGR+ E R++ ++ VL NADGSA E G K+LA VFGP Sbjct: 2 GGRETDVVLLDENGIRSDGRKVNETRKVTIKVGVLKNADGSAYIEFGGNKILAGVFGPRD 61 Query: 450 V 452 V Sbjct: 62 V 62 [141][TOP] >UniRef100_B3T985 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured marine crenarchaeote HF4000_APKG6J21 RepID=B3T985_9ARCH Length = 245 Score = 55.5 bits (132), Expect = 2e-06 Identities = 26/61 (42%), Positives = 36/61 (59%) Frame = +3 Query: 270 GEHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHA 449 G + + + G+R DGR+ E R++ ++ VL NADGSA E G K+LA VFGP Sbjct: 2 GGRETDVVLLDENGIRSDGRKVNETRKVTIKVGVLKNADGSAYIEFGGNKILAGVFGPRD 61 Query: 450 V 452 V Sbjct: 62 V 62 [142][TOP] >UniRef100_B3T8C1 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured marine crenarchaeote HF4000_APKG5E24 RepID=B3T8C1_9ARCH Length = 245 Score = 55.5 bits (132), Expect = 2e-06 Identities = 26/61 (42%), Positives = 36/61 (59%) Frame = +3 Query: 270 GEHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHA 449 G + + + G+R DGR+ E R++ ++ VL NADGSA E G K+LA VFGP Sbjct: 2 GGRETDVVLLDENGIRSDGRKVNETRKVTIKVGVLKNADGSAYIEFGGNKILAGVFGPRD 61 Query: 450 V 452 V Sbjct: 62 V 62 [143][TOP] >UniRef100_Q9LX74 AT3G46210 protein n=1 Tax=Arabidopsis thaliana RepID=Q9LX74_ARATH Length = 239 Score = 55.1 bits (131), Expect = 3e-06 Identities = 27/60 (45%), Positives = 38/60 (63%) Frame = +3 Query: 315 RLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGALVV 494 R DGR P +LR + C ++L GSA + G+TKVLAAV+GP A T+++E E+ V Sbjct: 5 REDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKACFEV 64 [144][TOP] >UniRef100_B9H8Z6 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H8Z6_POPTR Length = 243 Score = 55.1 bits (131), Expect = 3e-06 Identities = 28/60 (46%), Positives = 40/60 (66%) Frame = +3 Query: 315 RLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGALVV 494 R DGR P +LR ++C +VL A GSA + G+TKV AAV+GP A T+++E E+ + V Sbjct: 5 RDDGRSPSQLRPLSCSHNVLHRAHGSASWSQGDTKVSAAVYGPKAGTKKNENPEKACVEV 64 [145][TOP] >UniRef100_Q5TMQ4 AGAP011906-PA n=1 Tax=Anopheles gambiae RepID=Q5TMQ4_ANOGA Length = 308 Score = 55.1 bits (131), Expect = 3e-06 Identities = 27/66 (40%), Positives = 42/66 (63%) Frame = +3 Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470 E + +G R DGRR +E R+ ++ V+S A GSA E+GNTKV+ +VF P + ++++ Sbjct: 35 EALGKDGKRKDGRRLQESRKYYAKIGVVSTAKGSAYVELGNTKVIVSVFDPREIPKQNKF 94 Query: 471 REEGAL 488 E G L Sbjct: 95 CELGEL 100 [146][TOP] >UniRef100_A7P578 Chromosome chr4 scaffold_6, whole genome shotgun sequence n=2 Tax=Vitis vinifera RepID=A7P578_VITVI Length = 243 Score = 54.7 bits (130), Expect = 4e-06 Identities = 27/60 (45%), Positives = 40/60 (66%) Frame = +3 Query: 315 RLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGALVV 494 R DGR +LR + C ++L+ A GSA + G+TKVLAAV+GP A T+++E E+ + V Sbjct: 5 RDDGRTANQLRPLACSRNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKACIEV 64 [147][TOP] >UniRef100_B9RRX9 Exosome complex exonuclease RRP46, putative n=1 Tax=Ricinus communis RepID=B9RRX9_RICCO Length = 211 Score = 54.7 bits (130), Expect = 4e-06 Identities = 28/60 (46%), Positives = 40/60 (66%) Frame = +3 Query: 315 RLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGALVV 494 R DGR P +LR + C +VL+ A GSA + G+TKVLAAV+GP T+++E E+ + V Sbjct: 5 RDDGRTPNQLRPLACSRNVLNRAHGSASWCQGDTKVLAAVYGPKPGTKKNENPEKACIEV 64 [148][TOP] >UniRef100_A8A8Z2 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Ignicoccus hospitalis KIN4/I RepID=A8A8Z2_IGNH4 Length = 241 Score = 54.3 bits (129), Expect = 5e-06 Identities = 27/64 (42%), Positives = 40/64 (62%) Frame = +3 Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGA 485 +G R DGR P +LR + ++ VL NADGSA +G T+V+AAV+GP R + + A Sbjct: 12 DGKRHDGRGPADLRPLEMKVGVLYNADGSAWLRIGGTEVVAAVYGPREPPMRGMVLPDRA 71 Query: 486 LVVC 497 ++ C Sbjct: 72 VIRC 75 [149][TOP] >UniRef100_A8MA84 Exosome complex exonuclease 1 n=1 Tax=Caldivirga maquilingensis IC-167 RepID=A8MA84_CALMQ Length = 242 Score = 53.9 bits (128), Expect = 6e-06 Identities = 26/46 (56%), Positives = 33/46 (71%) Frame = +3 Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443 +G R+DGR P E R + Q+ VL NA+GSA+ GNT VLAAV+GP Sbjct: 12 DGKRVDGRLPEEHRPVTMQVGVLPNANGSALVAYGNTVVLAAVYGP 57 [150][TOP] >UniRef100_C0PI41 Putative uncharacterized protein n=1 Tax=Zea mays RepID=C0PI41_MAIZE Length = 149 Score = 53.5 bits (127), Expect = 8e-06 Identities = 28/62 (45%), Positives = 38/62 (61%) Frame = +3 Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGAL 488 G R DGR P +LR C + L A GSA + G+T VLAAV+GP + TR+ E E+ ++ Sbjct: 5 GSRADGRNPNQLRPFTCTGNPLHRAHGSARWAQGDTVVLAAVYGPKSGTRKGENPEKASI 64 Query: 489 VV 494 V Sbjct: 65 EV 66 [151][TOP] >UniRef100_B8A1N7 Putative uncharacterized protein n=1 Tax=Zea mays RepID=B8A1N7_MAIZE Length = 240 Score = 53.5 bits (127), Expect = 8e-06 Identities = 28/62 (45%), Positives = 38/62 (61%) Frame = +3 Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGAL 488 G R DGR P +LR C + L A GSA + G+T VLAAV+GP + TR+ E E+ ++ Sbjct: 5 GSRADGRNPNQLRPFTCTGNPLHRAHGSARWAQGDTVVLAAVYGPKSGTRKGENPEKASI 64 Query: 489 VV 494 V Sbjct: 65 EV 66 [152][TOP] >UniRef100_A9US69 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9US69_MONBE Length = 256 Score = 53.5 bits (127), Expect = 8e-06 Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 1/66 (1%) Frame = +3 Query: 300 SPEGL-RLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 476 +P G R DGR P +LR ++C V S ADGSA F +G T V +VFG V RSEL + Sbjct: 6 NPNGAAREDGRAPNQLRELSCDFAVNSAADGSARFRLGQTCVEVSVFGFRGVPVRSELPD 65 Query: 477 EGALVV 494 A+ V Sbjct: 66 RSAIEV 71 [153][TOP] >UniRef100_Q647V6 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos9D1 RepID=Q647V6_9ARCH Length = 245 Score = 53.5 bits (127), Expect = 8e-06 Identities = 27/52 (51%), Positives = 34/52 (65%) Frame = +3 Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461 +G RLDGR ELR I ++ VL ADGS E+GN KV+AAV+GP + R Sbjct: 10 DGKRLDGRGFDELRPIKIEVGVLKRADGSCYLELGNNKVIAAVYGPREMHPR 61 [154][TOP] >UniRef100_A3MUP1 Probable exosome complex exonuclease 1 n=1 Tax=Pyrobaculum calidifontis JCM 11548 RepID=ECX1_PYRCJ Length = 246 Score = 53.5 bits (127), Expect = 8e-06 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%) Frame = +3 Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV-TRRSELREEGA 485 GLR DGR P ++R + Q+ +SNADGSA+ G T +AAV+GP + R L + G Sbjct: 12 GLRADGRAPDQMREVQIQVGTVSNADGSAVVSYGATTAVAAVYGPREMHPRHLSLPDRGV 71 Query: 486 LVV 494 + V Sbjct: 72 MRV 74