[UP]
[1][TOP]
>UniRef100_A8J275 3'-5' exoribonuclease PH component of the exosome n=1
Tax=Chlamydomonas reinhardtii RepID=A8J275_CHLRE
Length = 245
Score = 145 bits (365), Expect = 2e-33
Identities = 73/74 (98%), Positives = 73/74 (98%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE
Sbjct: 1 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 60
Query: 468 LREEGALVVCE*SM 509
LREEGALVVCE SM
Sbjct: 61 LREEGALVVCEYSM 74
[2][TOP]
>UniRef100_C1EDA5 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EDA5_9CHLO
Length = 261
Score = 96.3 bits (238), Expect = 1e-18
Identities = 48/74 (64%), Positives = 56/74 (75%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
ME+VS EGLRLDGRRP+E RR+ C+L L +DGSA+FE+GNTKVLAAV GPH R SE
Sbjct: 1 MEYVSLEGLRLDGRRPKETRRMRCELTALPGSDGSAVFELGNTKVLAAVHGPHECRRPSE 60
Query: 468 LREEGALVVCE*SM 509
E+ LV CE SM
Sbjct: 61 RLEDRLLVKCEVSM 74
[3][TOP]
>UniRef100_B9I8T9 Predicted protein n=2 Tax=Populus RepID=B9I8T9_POPTR
Length = 241
Score = 96.3 bits (238), Expect = 1e-18
Identities = 46/74 (62%), Positives = 58/74 (78%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
MEFV+PEGLRLDGRRP E+R++ Q+ ++ ADGSA+FEMGNTKV+AAV+GP V RS+
Sbjct: 1 MEFVNPEGLRLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60
Query: 468 LREEGALVVCE*SM 509
+ ALV CE SM
Sbjct: 61 QINDQALVRCEYSM 74
[4][TOP]
>UniRef100_C6TJ02 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TJ02_SOYBN
Length = 190
Score = 95.5 bits (236), Expect = 2e-18
Identities = 47/74 (63%), Positives = 57/74 (77%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
ME+VSPEGLRLDGRRP E+R+I ++ +S ADGSAIFEMGNTKV+AAV+GP V R++
Sbjct: 1 MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRNQ 60
Query: 468 LREEGALVVCE*SM 509
ALV CE SM
Sbjct: 61 QISSHALVRCEYSM 74
[5][TOP]
>UniRef100_B9SWZ0 Exosome complex exonuclease RRP41, putative n=1 Tax=Ricinus
communis RepID=B9SWZ0_RICCO
Length = 241
Score = 95.1 bits (235), Expect = 2e-18
Identities = 46/74 (62%), Positives = 58/74 (78%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
ME+VSPEGLRLDGRRP E+R++ Q+ +S ADGSA+FEMGNTKV+AAV+GP V RS+
Sbjct: 1 MEYVSPEGLRLDGRRPMEMRQLRAQIGAVSKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60
Query: 468 LREEGALVVCE*SM 509
+ ALV CE +M
Sbjct: 61 QIIDQALVRCEYTM 74
[6][TOP]
>UniRef100_A5BIU1 Chromosome chr15 scaffold_40, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A5BIU1_VITVI
Length = 241
Score = 93.6 bits (231), Expect = 7e-18
Identities = 46/74 (62%), Positives = 57/74 (77%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
MEFVSPEGLRLDGRRP E+R+I ++ ++ ADGSA FEMGNTKV+AAV+GP V RS+
Sbjct: 1 MEFVSPEGLRLDGRRPMEMRQIRGEIGAVAKADGSAFFEMGNTKVIAAVYGPREVENRSQ 60
Query: 468 LREEGALVVCE*SM 509
+ ALV CE +M
Sbjct: 61 QISDQALVRCEYTM 74
[7][TOP]
>UniRef100_Q9SP08 Exonuclease RRP41 n=1 Tax=Arabidopsis thaliana RepID=Q9SP08_ARATH
Length = 241
Score = 88.6 bits (218), Expect = 2e-16
Identities = 43/75 (57%), Positives = 61/75 (81%), Gaps = 1/75 (1%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
ME+V+PEGLRLDGRR E+R+I ++ V+S ADGSA+FEMGNTKV+AAV+GP + +S+
Sbjct: 1 MEYVNPEGLRLDGRRFNEMRQIVAEVGVVSKADGSAVFEMGNTKVIAAVYGPREIQNKSQ 60
Query: 468 LRE-EGALVVCE*SM 509
++ + A+V+CE SM
Sbjct: 61 QKKNDHAVVLCEYSM 75
[8][TOP]
>UniRef100_A9TY02 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TY02_PHYPA
Length = 246
Score = 87.8 bits (216), Expect = 4e-16
Identities = 42/73 (57%), Positives = 55/73 (75%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
EFVSPEGLRLDGRRP E+R ++ + V+ +ADGSA+F MGNT+V+A V+GPH V ++
Sbjct: 4 EFVSPEGLRLDGRRPPEMRHLHAVVGVVPSADGSALFHMGNTQVMAVVYGPHEVHNKAHQ 63
Query: 471 REEGALVVCE*SM 509
+ ALV CE SM
Sbjct: 64 LHDKALVRCEYSM 76
[9][TOP]
>UniRef100_B3RL48 Putative uncharacterized protein n=1 Tax=Trichoplax adhaerens
RepID=B3RL48_TRIAD
Length = 243
Score = 84.7 bits (208), Expect = 3e-15
Identities = 37/64 (57%), Positives = 49/64 (76%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
ME +SPEGLR+DGRRP E+RR NC+L VLS ADGSA E GNTK LA++ GPH +++
Sbjct: 1 MEIISPEGLRIDGRRPEEIRRFNCRLGVLSRADGSAYLEQGNTKALASINGPHQAGDKAK 60
Query: 468 LREE 479
++ +
Sbjct: 61 IKHD 64
[10][TOP]
>UniRef100_Q16KB4 Exosome complex exonuclease RRP41, putative n=1 Tax=Aedes aegypti
RepID=Q16KB4_AEDAE
Length = 245
Score = 84.0 bits (206), Expect = 5e-15
Identities = 44/74 (59%), Positives = 50/74 (67%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
ME +S EGLRLDGRR ELRRI C+L V S DGSA E GNTKVLAAV+GPH +
Sbjct: 1 MELLSDEGLRLDGRRANELRRIQCKLGVFSQPDGSAYIEQGNTKVLAAVYGPHQAPAKKS 60
Query: 468 LREEGALVVCE*SM 509
EE +V C+ SM
Sbjct: 61 SHEE-VIVNCQYSM 73
[11][TOP]
>UniRef100_UPI0001923A5C PREDICTED: similar to putative exosome complex exonuclease RRP41
n=1 Tax=Hydra magnipapillata RepID=UPI0001923A5C
Length = 244
Score = 83.2 bits (204), Expect = 9e-15
Identities = 38/77 (49%), Positives = 54/77 (70%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
++ ++ VSPEGLR DGR+ ELR+I + + S ADGSA E GNTKV+A+V+GPH V+
Sbjct: 1 MAGLDLVSPEGLRFDGRKCHELRKITAKKGIFSQADGSAYIEQGNTKVIASVYGPHEVSN 60
Query: 459 RSELREEGALVVCE*SM 509
RS+ + L+ C+ SM
Sbjct: 61 RSKTLHDSTLINCQFSM 77
[12][TOP]
>UniRef100_B0XII7 Exosome complex exonuclease RRP41 n=1 Tax=Culex quinquefasciatus
RepID=B0XII7_CULQU
Length = 245
Score = 82.8 bits (203), Expect = 1e-14
Identities = 44/74 (59%), Positives = 50/74 (67%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
ME +S EGLRLDGRR ELRRI C+L V S DGSA E GNTKVLAAV+GPH +
Sbjct: 1 MELLSDEGLRLDGRRSNELRRIQCKLGVFSQPDGSAYVEQGNTKVLAAVYGPHQAPAKKS 60
Query: 468 LREEGALVVCE*SM 509
EE +V C+ SM
Sbjct: 61 NHEE-CVVNCQYSM 73
[13][TOP]
>UniRef100_C1MWG2 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MWG2_9CHLO
Length = 245
Score = 81.3 bits (199), Expect = 4e-14
Identities = 39/71 (54%), Positives = 49/71 (69%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
ME+VS EGLRLDGRRP+E R++ C + VL ADGSA F GNT+V+ AV GP R E
Sbjct: 1 MEYVSLEGLRLDGRRPKETRQMRCAMGVLPAADGSAEFRAGNTRVMCAVHGPRECVNRGE 60
Query: 468 LREEGALVVCE 500
+E A++ CE
Sbjct: 61 RDDERAIIKCE 71
[14][TOP]
>UniRef100_Q54EU6 Putative uncharacterized protein n=1 Tax=Dictyostelium discoideum
RepID=Q54EU6_DICDI
Length = 247
Score = 80.9 bits (198), Expect = 5e-14
Identities = 36/74 (48%), Positives = 53/74 (71%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
+S + ++SPEGLR+DGRR ELRRIN ++ + ADGSA +E GNTK++AAV+GP ++
Sbjct: 1 MSKLSYISPEGLRIDGRRANELRRINVEMGIFKRADGSAYYEQGNTKIIAAVYGPREISV 60
Query: 459 RSELREEGALVVCE 500
+ + A+V CE
Sbjct: 61 SGKGVFDRAVVKCE 74
[15][TOP]
>UniRef100_B7P8R1 Exosomal 3'-5' exoribonuclease complex, subunit Rrp41, putative n=1
Tax=Ixodes scapularis RepID=B7P8R1_IXOSC
Length = 246
Score = 79.3 bits (194), Expect = 1e-13
Identities = 41/78 (52%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
++ +E +S EG RLDGR+P E R+I+C+L V S ADGSA E GN KVLAAV+GPH
Sbjct: 1 MAGLELLSDEGYRLDGRKPNEQRKIDCRLGVFSQADGSAYIEQGNAKVLAAVYGPHEPRG 60
Query: 456 RRSELREEGALVVCE*SM 509
RS + LV C+ SM
Sbjct: 61 NRSRALHDRVLVNCQFSM 78
[16][TOP]
>UniRef100_A7S1D9 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7S1D9_NEMVE
Length = 247
Score = 79.3 bits (194), Expect = 1e-13
Identities = 36/71 (50%), Positives = 52/71 (73%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
++ +E +SPEGLR+DGR+ ELR++ C++ VLS ADGSA EMGNTK LA V+GPH V
Sbjct: 1 MAGLEVLSPEGLRIDGRKASELRKMVCKVGVLSQADGSAYIEMGNTKALATVYGPHEVQN 60
Query: 459 RSELREEGALV 491
+++ + L+
Sbjct: 61 KAKALHDRVLL 71
[17][TOP]
>UniRef100_UPI000186CE6C Exosome complex exonuclease RRP41, putative n=1 Tax=Pediculus
humanus corporis RepID=UPI000186CE6C
Length = 253
Score = 79.0 bits (193), Expect = 2e-13
Identities = 38/70 (54%), Positives = 50/70 (71%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
+ +S + LRLDGRR ELR+I C+L V S DGSA EMGNTKVLAAV+GPH V R++
Sbjct: 3 KLISDQNLRLDGRRASELRQIRCKLGVFSQPDGSAYIEMGNTKVLAAVYGPHQVRGRTKP 62
Query: 471 REEGALVVCE 500
+ A++ C+
Sbjct: 63 LLDAAVINCQ 72
[18][TOP]
>UniRef100_B4MX14 GK15569 n=1 Tax=Drosophila willistoni RepID=B4MX14_DROWI
Length = 251
Score = 78.6 bits (192), Expect = 2e-13
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = +3
Query: 282 SSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461
++ E +S +GLRLDGRRP ELR I C+L V DGSA E GNTKVLAAV+GPH +
Sbjct: 3 ANFELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKGK 62
Query: 462 SELREEGALVV 494
++ E +++
Sbjct: 63 NKSSESNDVII 73
[19][TOP]
>UniRef100_UPI000179264C PREDICTED: similar to exosome complex exonuclease RRP41, partial
n=1 Tax=Acyrthosiphon pisum RepID=UPI000179264C
Length = 122
Score = 78.2 bits (191), Expect = 3e-13
Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV-TRRS 464
M+ +S +GLR DGRR ELRRI C++ V + DGSA E GNTKV+AA++GPH + T R+
Sbjct: 1 MDLLSRQGLRTDGRRSGELRRIRCKMGVFNQPDGSAYLEQGNTKVVAAIYGPHEIRTNRA 60
Query: 465 ELREEGALVVCE*SM 509
+ + A++ C+ SM
Sbjct: 61 KAPNDSAVINCQYSM 75
[20][TOP]
>UniRef100_C4WSG4 ACYPI001085 protein n=1 Tax=Acyrthosiphon pisum RepID=C4WSG4_ACYPI
Length = 213
Score = 78.2 bits (191), Expect = 3e-13
Identities = 37/75 (49%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV-TRRS 464
M+ +S +GLR DGRR ELRRI C++ V + DGSA E GNTKV+AA++GPH + T R+
Sbjct: 1 MDLLSRQGLRTDGRRSGELRRIRCKMGVFNQPDGSAYLEQGNTKVVAAIYGPHEIRTNRA 60
Query: 465 ELREEGALVVCE*SM 509
+ + A++ C+ SM
Sbjct: 61 KAPNDSAVINCQYSM 75
[21][TOP]
>UniRef100_B4JCT4 GH10637 n=1 Tax=Drosophila grimshawi RepID=B4JCT4_DROGR
Length = 249
Score = 78.2 bits (191), Expect = 3e-13
Identities = 39/61 (63%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH-AVTRRS 464
ME +S +GLRLDGRRP ELR I C+L V DGSA E GNTKVLAAV+GPH A ++S
Sbjct: 5 MELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPHQAKAKKS 64
Query: 465 E 467
E
Sbjct: 65 E 65
[22][TOP]
>UniRef100_UPI00006A4B1C PREDICTED: similar to LOC495942 protein n=1 Tax=Ciona intestinalis
RepID=UPI00006A4B1C
Length = 247
Score = 77.0 bits (188), Expect = 7e-13
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
++ E +S EG R DGR+P ELRR+ C + V + ADGSA E GNTKVLAA++GPH +
Sbjct: 1 MAGFELISDEGYRFDGRKPSELRRVRCNMGVFTQADGSAYIEQGNTKVLAAIYGPHEASN 60
Query: 459 --RSELREEGALVVCE 500
RS + + + CE
Sbjct: 61 NMRSRVCLDKCFINCE 76
[23][TOP]
>UniRef100_B4P324 GE11809 n=1 Tax=Drosophila yakuba RepID=B4P324_DROYA
Length = 246
Score = 77.0 bits (188), Expect = 7e-13
Identities = 36/52 (69%), Positives = 40/52 (76%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
E +S +GLRLDGRRP ELRRI C+L V DGSA E GNTKVLAAV+GPH
Sbjct: 6 ELLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57
[24][TOP]
>UniRef100_B4KHM2 GI10716 n=1 Tax=Drosophila mojavensis RepID=B4KHM2_DROMO
Length = 249
Score = 77.0 bits (188), Expect = 7e-13
Identities = 36/53 (67%), Positives = 40/53 (75%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
ME +S +GLRLDGRRP ELR I C+L V DGSA E GNTKVLAAV+GPH
Sbjct: 5 MELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57
[25][TOP]
>UniRef100_B3NB10 GG10219 n=1 Tax=Drosophila erecta RepID=B3NB10_DROER
Length = 246
Score = 77.0 bits (188), Expect = 7e-13
Identities = 36/52 (69%), Positives = 40/52 (76%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
E +S +GLRLDGRRP ELRRI C+L V DGSA E GNTKVLAAV+GPH
Sbjct: 6 ELLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57
[26][TOP]
>UniRef100_B3MN36 GF15621 n=1 Tax=Drosophila ananassae RepID=B3MN36_DROAN
Length = 249
Score = 77.0 bits (188), Expect = 7e-13
Identities = 36/55 (65%), Positives = 41/55 (74%)
Frame = +3
Query: 282 SSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
S+ E +S +GLRLDGRRP ELR I C+L V DGSA E GNTKVLAAV+GPH
Sbjct: 3 SNFELLSEQGLRLDGRRPHELRHIQCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57
[27][TOP]
>UniRef100_B4M9A1 GJ18275 n=1 Tax=Drosophila virilis RepID=B4M9A1_DROVI
Length = 249
Score = 76.6 bits (187), Expect = 9e-13
Identities = 36/55 (65%), Positives = 41/55 (74%)
Frame = +3
Query: 282 SSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
S +E +S +GLRLDGRRP ELR I C+L V DGSA E GNTKVLAAV+GPH
Sbjct: 3 SRIELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57
[28][TOP]
>UniRef100_A8PTK4 Putative exosome complex exonuclease RRP41, putative n=1 Tax=Brugia
malayi RepID=A8PTK4_BRUMA
Length = 249
Score = 76.6 bits (187), Expect = 9e-13
Identities = 36/74 (48%), Positives = 49/74 (66%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
M +S G R DGR+P ++R +N +L V S ADGSA E GNTKVL AV+GP+ +RS
Sbjct: 1 MSIISEHGFRQDGRKPHQIRNLNYKLGVYSQADGSAYLEQGNTKVLCAVYGPYEPKQRSR 60
Query: 468 LREEGALVVCE*SM 509
L E+ ++ C+ SM
Sbjct: 61 LLEDRCIINCQYSM 74
[29][TOP]
>UniRef100_B9G2C8 Putative uncharacterized protein n=2 Tax=Oryza sativa
RepID=B9G2C8_ORYSJ
Length = 242
Score = 76.3 bits (186), Expect = 1e-12
Identities = 37/73 (50%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Frame = +3
Query: 288 MEFVSP-EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR- 461
ME+V+P G R+DGRRP E+R++ ++ V++ ADGSA+FEMGNT+V+AAV+GP V +
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKG 60
Query: 462 SELREEGALVVCE 500
++ + ALV CE
Sbjct: 61 QQVNSKDALVRCE 73
[30][TOP]
>UniRef100_B4FDA8 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B4FDA8_MAIZE
Length = 242
Score = 75.9 bits (185), Expect = 1e-12
Identities = 37/73 (50%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Frame = +3
Query: 288 MEFVSP-EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR- 461
ME+V+P G R+DGRRP E+R++ ++ V++ ADGSA+FEMGNT+V+AAV+GP V +
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKG 60
Query: 462 SELREEGALVVCE 500
++ + ALV CE
Sbjct: 61 QQVNSKEALVRCE 73
[31][TOP]
>UniRef100_Q9VK19 FI07225p n=1 Tax=Drosophila melanogaster RepID=Q9VK19_DROME
Length = 246
Score = 75.9 bits (185), Expect = 1e-12
Identities = 35/52 (67%), Positives = 40/52 (76%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
+ +S +GLRLDGRRP ELRRI C+L V DGSA E GNTKVLAAV+GPH
Sbjct: 6 DLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57
[32][TOP]
>UniRef100_Q8SYC8 RE67757p n=1 Tax=Drosophila melanogaster RepID=Q8SYC8_DROME
Length = 246
Score = 75.9 bits (185), Expect = 1e-12
Identities = 35/52 (67%), Positives = 40/52 (76%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
+ +S +GLRLDGRRP ELRRI C+L V DGSA E GNTKVLAAV+GPH
Sbjct: 6 DLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57
[33][TOP]
>UniRef100_B4IEH2 GM25757 n=1 Tax=Drosophila sechellia RepID=B4IEH2_DROSE
Length = 246
Score = 75.9 bits (185), Expect = 1e-12
Identities = 35/52 (67%), Positives = 40/52 (76%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
+ +S +GLRLDGRRP ELRRI C+L V DGSA E GNTKVLAAV+GPH
Sbjct: 6 DLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57
[34][TOP]
>UniRef100_C5YZ99 Putative uncharacterized protein Sb09g022550 n=1 Tax=Sorghum
bicolor RepID=C5YZ99_SORBI
Length = 242
Score = 75.5 bits (184), Expect = 2e-12
Identities = 37/73 (50%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Frame = +3
Query: 288 MEFVSP-EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR- 461
ME+V+P G R+DGRRP E+R++ ++ V++ ADGSA+FEMGNT+V+AAV+GP V +
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREVQNKG 60
Query: 462 SELREEGALVVCE 500
++ ALV CE
Sbjct: 61 QQVNSNEALVRCE 73
[35][TOP]
>UniRef100_Q29KH8 GA13761 n=2 Tax=pseudoobscura subgroup RepID=Q29KH8_DROPS
Length = 249
Score = 75.5 bits (184), Expect = 2e-12
Identities = 35/54 (64%), Positives = 40/54 (74%)
Frame = +3
Query: 285 SMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
+ E +S +GLRLDGRRP ELR I C+L V DGSA E GNTKVLAAV+GPH
Sbjct: 4 NFELLSEQGLRLDGRRPHELRHIKCKLGVFEQPDGSAYMEQGNTKVLAAVYGPH 57
[36][TOP]
>UniRef100_C5YVG7 Putative uncharacterized protein Sb09g028170 n=1 Tax=Sorghum
bicolor RepID=C5YVG7_SORBI
Length = 242
Score = 75.1 bits (183), Expect = 3e-12
Identities = 36/73 (49%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Frame = +3
Query: 288 MEFVSP-EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR- 461
ME+V+P G R+DGRRP E+R++ ++ +++ ADGSA+FEMGNT+V+AAV+GP V +
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGIVARADGSALFEMGNTRVIAAVYGPREVQNKG 60
Query: 462 SELREEGALVVCE 500
++ ALV CE
Sbjct: 61 QQVNSNEALVRCE 73
[37][TOP]
>UniRef100_B6T763 Exosome complex exonuclease RRP41 n=1 Tax=Zea mays
RepID=B6T763_MAIZE
Length = 242
Score = 74.7 bits (182), Expect = 3e-12
Identities = 37/73 (50%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Frame = +3
Query: 288 MEFVSP-EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR- 461
ME+V+P G R+DGRRP E+R++ ++ V+ ADGSA+FEMGNT+V+AAV+GP V +
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVVRADGSALFEMGNTRVIAAVYGPREVQNKG 60
Query: 462 SELREEGALVVCE 500
++ + ALV CE
Sbjct: 61 QQVNSKEALVRCE 73
[38][TOP]
>UniRef100_UPI0001862F93 hypothetical protein BRAFLDRAFT_218985 n=1 Tax=Branchiostoma
floridae RepID=UPI0001862F93
Length = 244
Score = 74.3 bits (181), Expect = 4e-12
Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
++ +E +S +G R+DGRR ELR++ ++ V + ADGSA E GNTK LA V+GPH V +
Sbjct: 1 MAGLEIISDQGYRIDGRRSSELRKVCARMGVFTQADGSAYIEQGNTKALATVYGPHEVRK 60
Query: 459 -RSELREEGALVVCE*SM 509
R +++ + A+V C+ SM
Sbjct: 61 GRGKIQHDRAVVNCQFSM 78
[39][TOP]
>UniRef100_UPI00003608A8 UPI00003608A8 related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00003608A8
Length = 245
Score = 74.3 bits (181), Expect = 4e-12
Identities = 36/78 (46%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
++ +E +S +G R+DGR+ ELR+I ++ V + ADGSA E GNTKVLA V+GPH +
Sbjct: 1 MAGLELLSDQGYRIDGRKATELRKIQARMGVFAQADGSAYLEQGNTKVLAVVYGPHEMRG 60
Query: 456 RRSELREEGALVVCE*SM 509
RS R + A++ C+ SM
Sbjct: 61 SRSRARHDRAVINCQYSM 78
[40][TOP]
>UniRef100_C3XU58 Putative uncharacterized protein n=1 Tax=Branchiostoma floridae
RepID=C3XU58_BRAFL
Length = 246
Score = 74.3 bits (181), Expect = 4e-12
Identities = 35/78 (44%), Positives = 54/78 (69%), Gaps = 1/78 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
++ +E +S +G R+DGRR ELR++ ++ V + ADGSA E GNTK LA V+GPH V +
Sbjct: 1 MAGLEIISDQGYRIDGRRSSELRKVCARMGVFTQADGSAYIEQGNTKALATVYGPHEVRK 60
Query: 459 -RSELREEGALVVCE*SM 509
R +++ + A+V C+ SM
Sbjct: 61 GRGKIQHDRAVVNCQFSM 78
[41][TOP]
>UniRef100_UPI00017B08EC UPI00017B08EC related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B08EC
Length = 245
Score = 72.8 bits (177), Expect = 1e-11
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
++ +E +S +G R+DGR+ ELR+I ++ V + ADGSA E GNTK LA V+GPH +
Sbjct: 1 MAGLELLSDQGYRIDGRKATELRKIQARMGVFAQADGSAYLEQGNTKALAVVYGPHEMRG 60
Query: 456 RRSELREEGALVVCE*SM 509
RS R + A++ C+ SM
Sbjct: 61 SRSRARHDRAVINCQYSM 78
[42][TOP]
>UniRef100_UPI0000EDBA5C PREDICTED: similar to Chain C, Structure Of The Human Rna Exosome
Composed Of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42,
Csl4, Rrp4, And Rrp40 n=1 Tax=Ornithorhynchus anatinus
RepID=UPI0000EDBA5C
Length = 245
Score = 72.4 bits (176), Expect = 2e-11
Identities = 38/78 (48%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
++ +E +S EG R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH +
Sbjct: 1 MAGLELLSDEGYRVDGRRAGELRKIEARMGVFAQADGSAYIEQGNTKALAVVYGPHEMRG 60
Query: 456 RRSELREEGALVVCE*SM 509
RS + ALV C+ SM
Sbjct: 61 LRSRALPDRALVNCQFSM 78
[43][TOP]
>UniRef100_Q6PBZ8 Exosc4 protein n=1 Tax=Danio rerio RepID=Q6PBZ8_DANRE
Length = 245
Score = 72.0 bits (175), Expect = 2e-11
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
++ +E +S +G RLDGR+ ELR++ ++ V + ADGSA E GNTK LA V+GPH +
Sbjct: 1 MAGLELLSDQGYRLDGRKATELRKVQARMSVFAQADGSAYLEQGNTKALAVVYGPHEIRG 60
Query: 456 RRSELREEGALVVCE*SM 509
RS+ + A++ C+ SM
Sbjct: 61 SRSKSLHDRAIINCQYSM 78
[44][TOP]
>UniRef100_B5X813 Exosome complex exonuclease RRP41 n=1 Tax=Salmo salar
RepID=B5X813_SALSA
Length = 245
Score = 72.0 bits (175), Expect = 2e-11
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
++ +E +S +G RLDGR+ ELR++ ++ V + ADGSA E GNTK LA V+GPH V
Sbjct: 1 MAGLELLSDQGYRLDGRKAAELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVRG 60
Query: 456 RRSELREEGALVVCE*SM 509
RS+ + A++ C+ SM
Sbjct: 61 SRSKTLHDRAVINCQYSM 78
[45][TOP]
>UniRef100_Q975G8 Probable exosome complex exonuclease 1 n=1 Tax=Sulfolobus tokodaii
RepID=ECX1_SULTO
Length = 247
Score = 72.0 bits (175), Expect = 2e-11
Identities = 34/45 (75%), Positives = 39/45 (86%)
Frame = +3
Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443
GLRLDGR+P E+R I +L VL NADGSAIFEMGNTKV+AAV+GP
Sbjct: 18 GLRLDGRKPDEMRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGP 62
[46][TOP]
>UniRef100_UPI00005EC0D3 PREDICTED: similar to Chain G, Structure Of The Human Rna Exosome
Composed Of Rrp41, Rrp45, Rrp46, Rrp43, Mtr3, Rrp42,
Csl4, Rrp4, And Rrp40 n=1 Tax=Monodelphis domestica
RepID=UPI00005EC0D3
Length = 245
Score = 71.6 bits (174), Expect = 3e-11
Identities = 37/78 (47%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
++ +E +S +G R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH +
Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEMRG 60
Query: 456 RRSELREEGALVVCE*SM 509
RS + ALV C+ SM
Sbjct: 61 SRSRALPDRALVNCQYSM 78
[47][TOP]
>UniRef100_C1BWS7 Exosome complex exonuclease RRP41 n=1 Tax=Esox lucius
RepID=C1BWS7_ESOLU
Length = 245
Score = 71.6 bits (174), Expect = 3e-11
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV-T 455
++ +E +S +G RLDGR+ ELR++ ++ V + ADGSA E GNTK LA V+GPH V
Sbjct: 1 MAGVELLSDQGYRLDGRKATELRKVQARMGVFAQADGSAYIEQGNTKALAVVYGPHEVRM 60
Query: 456 RRSELREEGALVVCE*SM 509
RS+ + A++ C+ SM
Sbjct: 61 SRSKTLHDRAVINCQYSM 78
[48][TOP]
>UniRef100_Q5PQ94 LOC495942 protein n=1 Tax=Xenopus laevis RepID=Q5PQ94_XENLA
Length = 249
Score = 71.2 bits (173), Expect = 4e-11
Identities = 34/78 (43%), Positives = 52/78 (66%), Gaps = 1/78 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
++ ME +S +G R+DGR+ ELR+I ++ V + ADGSA E GNTK LA V+GPH +
Sbjct: 1 MAGMELLSDQGYRVDGRKAGELRKIRARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60
Query: 456 RRSELREEGALVVCE*SM 509
RS++ + ++ C+ SM
Sbjct: 61 SRSKMLHDRCVINCQYSM 78
[49][TOP]
>UniRef100_UPI00005A29C7 PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
RNA processing protein 41) (Exosome component 4) (p12A)
isoform 4 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A29C7
Length = 244
Score = 70.9 bits (172), Expect = 5e-11
Identities = 34/74 (45%), Positives = 47/74 (63%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
++ +E +S +G R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH
Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEARG 60
Query: 459 RSELREEGALVVCE 500
L + ALV C+
Sbjct: 61 VRTLTQRKALVNCQ 74
[50][TOP]
>UniRef100_UPI00001CFD4D exosome component 4 n=1 Tax=Rattus norvegicus RepID=UPI00001CFD4D
Length = 245
Score = 70.9 bits (172), Expect = 5e-11
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
++ +E +S +G R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH +
Sbjct: 1 MAGLELLSDQGYRIDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60
Query: 456 RRSELREEGALVVCE 500
RS + ALV C+
Sbjct: 61 SRSRALPDRALVNCQ 75
[51][TOP]
>UniRef100_Q28H58 Exosome component 4 n=1 Tax=Xenopus (Silurana) tropicalis
RepID=Q28H58_XENTR
Length = 249
Score = 70.9 bits (172), Expect = 5e-11
Identities = 34/78 (43%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
++ +E +S +G R+DGR+ ELR+I ++ V + ADGSA E GNTK LA V+GPH +
Sbjct: 1 MAGLELLSDQGYRVDGRKAGELRKIRARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60
Query: 456 RRSELREEGALVVCE*SM 509
RS++ + ++V C+ SM
Sbjct: 61 SRSKMLHDRSVVNCQYSM 78
[52][TOP]
>UniRef100_Q921I9 Exosome complex exonuclease RRP41 n=2 Tax=Mus musculus
RepID=EXOS4_MOUSE
Length = 245
Score = 70.9 bits (172), Expect = 5e-11
Identities = 35/75 (46%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
++ +E +S +G R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH +
Sbjct: 1 MAGLELLSDQGYRIDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60
Query: 456 RRSELREEGALVVCE 500
RS + ALV C+
Sbjct: 61 SRSRALPDRALVNCQ 75
[53][TOP]
>UniRef100_UPI0001758632 PREDICTED: similar to exosome complex exonuclease RRP41, putative
n=1 Tax=Tribolium castaneum RepID=UPI0001758632
Length = 249
Score = 70.5 bits (171), Expect = 6e-11
Identities = 39/73 (53%), Positives = 49/73 (67%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
E +S GLR DGRR ELRRI C+L V + DGSA E G TKVLAAV+GPH V ++
Sbjct: 6 ELLSKIGLRQDGRRADELRRIRCKLGVFTEPDGSAYLEQGLTKVLAAVYGPHQV-GFAKA 64
Query: 471 REEGALVVCE*SM 509
+ + A+V C+ SM
Sbjct: 65 QHDSAVVNCQFSM 77
[54][TOP]
>UniRef100_Q6K293 Putative exosome component 4 n=1 Tax=Oryza sativa Japonica Group
RepID=Q6K293_ORYSJ
Length = 245
Score = 70.5 bits (171), Expect = 6e-11
Identities = 32/56 (57%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
Frame = +3
Query: 288 MEFVSP-EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV 452
ME+V+P G R+DGRRP E+R++ ++ V++ ADGSA+FEMGNT+V+AAV+GP V
Sbjct: 1 MEYVNPLTGFRVDGRRPNEMRQLKGEVGVVARADGSALFEMGNTRVIAAVYGPREV 56
[55][TOP]
>UniRef100_A4ID90 Exosome complex exonuclease RRP41, putative n=1 Tax=Leishmania
infantum RepID=A4ID90_LEIIN
Length = 246
Score = 70.1 bits (170), Expect = 8e-11
Identities = 34/70 (48%), Positives = 42/70 (60%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
E+VSP GLRLDGRRP E RR++ LS DGS +G +KV A VFGP + E
Sbjct: 6 EYVSPAGLRLDGRRPLEARRMDIAFSTLSACDGSCDITLGQSKVCACVFGPRESLHKQEA 65
Query: 471 REEGALVVCE 500
+ + LV CE
Sbjct: 66 KHDKGLVTCE 75
[56][TOP]
>UniRef100_Q4Q1B7 Exosome complex exonuclease RRP41, putative n=1 Tax=Leishmania
major RepID=Q4Q1B7_LEIMA
Length = 246
Score = 69.7 bits (169), Expect = 1e-10
Identities = 34/70 (48%), Positives = 42/70 (60%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
E+VSP GLRLDGRRP E RR++ LS DGS +G +KV A VFGP + E
Sbjct: 6 EYVSPAGLRLDGRRPLEARRMDIAFGTLSACDGSCDITLGQSKVCACVFGPRESLHKQEA 65
Query: 471 REEGALVVCE 500
+ + LV CE
Sbjct: 66 KHDKGLVTCE 75
[57][TOP]
>UniRef100_C1BN11 Exosome complex exonuclease RRP41 n=1 Tax=Caligus rogercresseyi
RepID=C1BN11_9MAXI
Length = 246
Score = 69.7 bits (169), Expect = 1e-10
Identities = 35/53 (66%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLS-NADGSAIFEMGNTKVLAAVFGP 443
ME +S +GLRLDGR+ ELRR+ C+L S +ADGSA EMGNTKVLAAV+GP
Sbjct: 1 MELLSDQGLRLDGRKSDELRRLRCRLGAFSWSADGSAYLEMGNTKVLAAVYGP 53
[58][TOP]
>UniRef100_C3N5R3 Exosome complex exonuclease 1 n=1 Tax=Sulfolobus islandicus M.16.27
RepID=C3N5R3_SULIA
Length = 245
Score = 69.7 bits (169), Expect = 1e-10
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443
+ + +G R+DGR+P ELR I +L VL NADGSAIFEMGNTK +AAV+GP
Sbjct: 8 KLILEDGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGP 58
[59][TOP]
>UniRef100_C3MVG4 Exosome complex exonuclease 1 n=2 Tax=Sulfolobus islandicus
RepID=C3MVG4_SULIM
Length = 245
Score = 69.7 bits (169), Expect = 1e-10
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443
+ + +G R+DGR+P ELR I +L VL NADGSAIFEMGNTK +AAV+GP
Sbjct: 8 KLILEDGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGP 58
[60][TOP]
>UniRef100_C3MQ46 Exosome complex exonuclease 1 n=3 Tax=Sulfolobus islandicus
RepID=C3MQ46_SULIL
Length = 245
Score = 69.7 bits (169), Expect = 1e-10
Identities = 32/51 (62%), Positives = 40/51 (78%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443
+ + +G R+DGR+P ELR I +L VL NADGSAIFEMGNTK +AAV+GP
Sbjct: 8 KLILEDGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGP 58
[61][TOP]
>UniRef100_UPI00017968DC PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
RNA-processing protein 41) (Exosome component 4) (p12A)
n=1 Tax=Equus caballus RepID=UPI00017968DC
Length = 245
Score = 69.3 bits (168), Expect = 1e-10
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
++ +E +S +G R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH +
Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60
Query: 456 RRSELREEGALVVCE 500
R+ + ALV C+
Sbjct: 61 SRARALPDRALVNCQ 75
[62][TOP]
>UniRef100_UPI00004A57C5 PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
RNA processing protein 41) (Exosome component 4) (p12A)
isoform 1 n=1 Tax=Canis lupus familiaris
RepID=UPI00004A57C5
Length = 245
Score = 69.3 bits (168), Expect = 1e-10
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
++ +E +S +G R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH +
Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60
Query: 456 RRSELREEGALVVCE 500
R+ + ALV C+
Sbjct: 61 SRARALPDRALVNCQ 75
[63][TOP]
>UniRef100_A5E3M3 Exosome complex exonuclease RRP41 n=1 Tax=Lodderomyces elongisporus
RepID=A5E3M3_LODEL
Length = 244
Score = 69.3 bits (168), Expect = 1e-10
Identities = 35/72 (48%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455
+S ME SPEGLR+DGRR ELRR C+++ N +DGS+ E GNTKV+ V GP T
Sbjct: 1 MSRMELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVICTVIGPMEPT 60
Query: 456 RRSELREEGALV 491
R+++ ++ A V
Sbjct: 61 SRAQMNQDRANV 72
[64][TOP]
>UniRef100_Q9NPD3 Exosome complex exonuclease RRP41 n=1 Tax=Homo sapiens
RepID=EXOS4_HUMAN
Length = 245
Score = 69.3 bits (168), Expect = 1e-10
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
++ +E +S +G R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH +
Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60
Query: 456 RRSELREEGALVVCE 500
R+ + ALV C+
Sbjct: 61 SRARALPDRALVNCQ 75
[65][TOP]
>UniRef100_Q7YRA3 Exosome complex exonuclease RRP41 n=1 Tax=Bos taurus
RepID=EXOS4_BOVIN
Length = 245
Score = 69.3 bits (168), Expect = 1e-10
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
++ +E +S +G R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH +
Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPHEIRG 60
Query: 456 RRSELREEGALVVCE 500
R+ + ALV C+
Sbjct: 61 SRARALPDRALVNCQ 75
[66][TOP]
>UniRef100_A4HPG8 Exosome complex exonuclease RRP41, putative n=1 Tax=Leishmania
braziliensis RepID=A4HPG8_LEIBR
Length = 246
Score = 68.9 bits (167), Expect = 2e-10
Identities = 33/70 (47%), Positives = 43/70 (61%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
E+VSP GLRLDGRRP E RR++ LS DGS +G +KV A++FGP + E
Sbjct: 6 EYVSPAGLRLDGRRPLEARRMDIVFGTLSACDGSCDITVGQSKVCASIFGPRESLHKQEA 65
Query: 471 REEGALVVCE 500
+ + LV CE
Sbjct: 66 KHDKVLVTCE 75
[67][TOP]
>UniRef100_Q9UXC2 Probable exosome complex exonuclease 1 n=2 Tax=Sulfolobus
solfataricus RepID=ECX1_SULSO
Length = 248
Score = 68.6 bits (166), Expect = 2e-10
Identities = 32/51 (62%), Positives = 39/51 (76%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443
+ + +G R DGR+P ELR I +L VL NADGSAIFEMGNTK +AAV+GP
Sbjct: 11 KLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGP 61
[68][TOP]
>UniRef100_Q4SLK0 Chromosome 15 SCAF14556, whole genome shotgun sequence n=1
Tax=Tetraodon nigroviridis RepID=Q4SLK0_TETNG
Length = 291
Score = 68.2 bits (165), Expect = 3e-10
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 16/93 (17%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVT- 455
++ +E +S +G R+DGR+ ELR+I ++ V + ADGSA E GNTK LA V+GPH V
Sbjct: 1 MAGLELLSDQGYRIDGRKATELRKIQARMGVFAQADGSAYLEQGNTKALAVVYGPHEVCV 60
Query: 456 ---------------RRSELREEGALVVCE*SM 509
RS R + A++ C+ SM
Sbjct: 61 CVCVCVCVCVCQMRGSRSRARHDRAVINCQYSM 93
[69][TOP]
>UniRef100_C4YA81 Putative uncharacterized protein n=1 Tax=Clavispora lusitaniae ATCC
42720 RepID=C4YA81_CLAL4
Length = 244
Score = 68.2 bits (165), Expect = 3e-10
Identities = 35/72 (48%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455
+S ME SPEGLR+DGRR ELRR C+++ +N ADGS+ E GNTKV+ V GP +
Sbjct: 1 MSRMELYSPEGLRVDGRRWNELRRFECKINTHANSADGSSYIEQGNTKVMCMVHGPKEPS 60
Query: 456 RRSELREEGALV 491
RS+ + A +
Sbjct: 61 LRSQSNQNRATI 72
[70][TOP]
>UniRef100_C4M2G1 3' exoribonuclease family protein n=1 Tax=Entamoeba histolytica
HM-1:IMSS RepID=C4M2G1_ENTHI
Length = 238
Score = 67.4 bits (163), Expect = 5e-10
Identities = 37/69 (53%), Positives = 46/69 (66%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
ME++SPEG RLDGRR E+R+ +++ LS ADGSA MGNT V A VFGP RR+
Sbjct: 1 MEYISPEGYRLDGRRTTEMRKCEMEINFLSTADGSARVRMGNTIVEAVVFGPLEGRRRN- 59
Query: 468 LREEGALVV 494
RE L+V
Sbjct: 60 -REGAELMV 67
[71][TOP]
>UniRef100_A8WQQ5 Putative exosome complex exonuclease RRP41 n=2 Tax=Caenorhabditis
briggsae RepID=EXOS4_CAEBR
Length = 240
Score = 67.4 bits (163), Expect = 5e-10
Identities = 32/71 (45%), Positives = 47/71 (66%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
M +S G R+DGRRP ++R IN +L + NA+GS E GNTKVL AV+GP+ ++ S+
Sbjct: 1 MSIISEHGFRMDGRRPAQIRNINTRLGLNRNAEGSCYLEHGNTKVLCAVYGPYE-SKASK 59
Query: 468 LREEGALVVCE 500
E+ +VC+
Sbjct: 60 RLEDRCAIVCQ 70
[72][TOP]
>UniRef100_Q4JB27 Probable exosome complex exonuclease 1 n=1 Tax=Sulfolobus
acidocaldarius RepID=ECX1_SULAC
Length = 243
Score = 67.4 bits (163), Expect = 5e-10
Identities = 33/51 (64%), Positives = 39/51 (76%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443
+ + GLR DGR+ ELR I +L VL NADGSAIFEMGNTKV+AAV+GP
Sbjct: 8 KLILENGLRTDGRKLDELRPIKIELGVLKNADGSAIFEMGNTKVIAAVYGP 58
[73][TOP]
>UniRef100_Q5BZN7 SJCHGC06185 protein (Fragment) n=1 Tax=Schistosoma japonicum
RepID=Q5BZN7_SCHJA
Length = 251
Score = 67.0 bits (162), Expect = 7e-10
Identities = 30/64 (46%), Positives = 42/64 (65%)
Frame = +3
Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGAL 488
G R+DGRRP ELRR++CQ N+DG GNTKV+A+V GPHA + + +GA
Sbjct: 1 GRRVDGRRPNELRRVHCQFGS-GNSDGIVFLHQGNTKVIASVVGPHAPRTKGDGNPDGAT 59
Query: 489 VVCE 500
++C+
Sbjct: 60 IICQ 63
[74][TOP]
>UniRef100_UPI00005A29C8 PREDICTED: similar to Exosome complex exonuclease RRP41 (Ribosomal
RNA processing protein 41) (Exosome component 4) (p12A)
isoform 5 n=1 Tax=Canis lupus familiaris
RepID=UPI00005A29C8
Length = 238
Score = 66.2 bits (160), Expect = 1e-09
Identities = 34/74 (45%), Positives = 46/74 (62%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
++ +E +S +G R+DGRR ELR+I ++ V + ADGSA E GNTK LA V+GPH
Sbjct: 1 MAGLELLSDQGYRVDGRRAGELRKIQARMGVFAQADGSAYIEQGNTKALAVVYGPH---- 56
Query: 459 RSELREEGALVVCE 500
E ALV C+
Sbjct: 57 --EASGHRALVNCQ 68
[75][TOP]
>UniRef100_A3DMU9 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Staphylothermus
marinus F1 RepID=A3DMU9_STAMF
Length = 240
Score = 65.9 bits (159), Expect = 2e-09
Identities = 34/67 (50%), Positives = 42/67 (62%)
Frame = +3
Query: 297 VSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 476
+ +GLR DGR+P ELR I + VL NADGSA E G TKV+AAV+GP V R
Sbjct: 7 IREDGLRHDGRKPNELRPIKMDVGVLKNADGSAYVEYGGTKVIAAVYGPREVYPRHLALP 66
Query: 477 EGALVVC 497
+ AL+ C
Sbjct: 67 DRALIRC 73
[76][TOP]
>UniRef100_Q17533 Putative exosome complex exonuclease RRP41 n=1 Tax=Caenorhabditis
elegans RepID=EXOS4_CAEEL
Length = 240
Score = 65.9 bits (159), Expect = 2e-09
Identities = 32/71 (45%), Positives = 46/71 (64%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
M +S G R+DGRRP ++R IN +L + NA+GS E GNTKVL AV+GP+ + S+
Sbjct: 1 MNIISEHGFRIDGRRPAQIRNINTRLGLNRNAEGSCYLEHGNTKVLCAVYGPYE-GKSSK 59
Query: 468 LREEGALVVCE 500
E+ +VC+
Sbjct: 60 RIEDKCAIVCQ 70
[77][TOP]
>UniRef100_B9WFQ9 Exosome complex exonuclease, putative (Ribosomal rna processing
protein, putative) (3'-to-5' phosphorolytic
exoribonuclease, putative) n=1 Tax=Candida dubliniensis
CD36 RepID=B9WFQ9_CANDC
Length = 240
Score = 65.5 bits (158), Expect = 2e-09
Identities = 35/67 (52%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVTRRS 464
ME SPEGLR+DGRR ELRR C+++ N +DGS+ E GNTKV+ V GP T RS
Sbjct: 1 MELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVMCTVQGPIEPTLRS 60
Query: 465 ELREEGA 485
+ E A
Sbjct: 61 QQHSERA 67
[78][TOP]
>UniRef100_B0ERA1 Exosome complex exonuclease RRP41, putative n=1 Tax=Entamoeba
dispar SAW760 RepID=B0ERA1_ENTDI
Length = 238
Score = 65.1 bits (157), Expect = 3e-09
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
ME++SPEG RLDGRR E+R+ +++ L+ +DGSA MGNT V A VFGP RR+
Sbjct: 1 MEYISPEGYRLDGRRTTEMRKCEMEINFLNTSDGSARVRMGNTIVEAVVFGPLEGRRRN- 59
Query: 468 LREEGALVV 494
RE L+V
Sbjct: 60 -REGAELMV 67
[79][TOP]
>UniRef100_Q12ZB7 Archaeal exosome complex RNA-binding protein n=1
Tax=Methanococcoides burtonii DSM 6242
RepID=Q12ZB7_METBU
Length = 343
Score = 65.1 bits (157), Expect = 3e-09
Identities = 34/68 (50%), Positives = 43/68 (63%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
++F+ GLRLDGRR E+R + ++ VLS ADGS E GN KVLAAV+GP + R
Sbjct: 6 VKFIDENGLRLDGRRVDEIRPMTVEMGVLSRADGSCYLEWGNNKVLAAVYGPRELHPRRL 65
Query: 468 LREEGALV 491
R ALV
Sbjct: 66 QRPSEALV 73
[80][TOP]
>UniRef100_A4YCV2 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Metallosphaera
sedula DSM 5348 RepID=A4YCV2_METS5
Length = 245
Score = 65.1 bits (157), Expect = 3e-09
Identities = 29/61 (47%), Positives = 43/61 (70%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
+ + + +G RLDGRRP ELR + ++ VL NADGS++ E+GNTK++AAV+GP +
Sbjct: 4 VQKPKLILDDGRRLDGRRPDELRPMKMEIGVLKNADGSSLVEVGNTKIIAAVYGPREMHP 63
Query: 459 R 461
R
Sbjct: 64 R 64
[81][TOP]
>UniRef100_A1RXQ6 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Thermofilum
pendens Hrk 5 RepID=A1RXQ6_THEPD
Length = 245
Score = 65.1 bits (157), Expect = 3e-09
Identities = 33/71 (46%), Positives = 43/71 (60%)
Frame = +3
Query: 297 VSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 476
+ G R+DGR P E+R + + VL NADGSA E+GN KVLAAV+GP R E
Sbjct: 10 IDENGRRVDGRLPDEMRPLRVEAGVLKNADGSAYVELGNNKVLAAVYGPREPMPRHEALP 69
Query: 477 EGALVVCE*SM 509
+ A++ C SM
Sbjct: 70 DRAILKCRYSM 80
[82][TOP]
>UniRef100_Q6BHJ0 DEHA2G18194p n=2 Tax=Debaryomyces hansenii RepID=Q6BHJ0_DEBHA
Length = 245
Score = 64.3 bits (155), Expect = 4e-09
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDV-LSNADGSAIFEMGNTKVLAAVFGPHAVT 455
+S ME SPEGLR+DGRR ELRR C+++ S++DGS+ E GNTK++ V GP +
Sbjct: 1 MSRMELYSPEGLRIDGRRWNELRRFECRINTHPSSSDGSSYIEQGNTKIICMVQGPMEPS 60
Query: 456 RRSELREEGALV 491
RS+ A +
Sbjct: 61 LRSQTNSSKASI 72
[83][TOP]
>UniRef100_C5DCB7 KLTH0B01738p n=1 Tax=Lachancea thermotolerans CBS 6340
RepID=C5DCB7_LACTC
Length = 245
Score = 64.3 bits (155), Expect = 4e-09
Identities = 33/72 (45%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNA-DGSAIFEMGNTKVLAAVFGPHAVT 455
+S +E SPEGLR+DGRR ELRR+ C ++ +NA DGS+ E GN KV+ V GP
Sbjct: 1 MSRLEIYSPEGLRVDGRRWNELRRLECSINTHANASDGSSYLEQGNNKVITLVTGPQEPK 60
Query: 456 RRSELREEGALV 491
RS++ A +
Sbjct: 61 LRSQMNVTKATI 72
[84][TOP]
>UniRef100_C4R4E4 3'-to-5' phosphorolytic exoribonuclease that is a subunit of the
exosome n=1 Tax=Pichia pastoris GS115 RepID=C4R4E4_PICPG
Length = 246
Score = 63.9 bits (154), Expect = 6e-09
Identities = 34/68 (50%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLS-NADGSAIFEMGNTKVLAAVFGPHAVTRRS 464
ME SPEGLR+DGRR ELRR C+++ ADGSA E GNTK++ + GPH TR
Sbjct: 1 MELYSPEGLRVDGRRWNELRRFYCRINTHPIVADGSAYVEAGNTKIVCLLNGPHEPTRSQ 60
Query: 465 ELREEGAL 488
++G+L
Sbjct: 61 MNTQKGSL 68
[85][TOP]
>UniRef100_UPI00015B5B6C PREDICTED: similar to ENSANGP00000009222 n=1 Tax=Nasonia
vitripennis RepID=UPI00015B5B6C
Length = 270
Score = 63.5 bits (153), Expect = 8e-09
Identities = 30/49 (61%), Positives = 34/49 (69%)
Frame = +3
Query: 300 SPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
S GLR DGRRP ELRRI ++ V ADGSA E G TK+LA V+GPH
Sbjct: 8 SQGGLRADGRRPLELRRIRLRMGVFGQADGSAYLEQGKTKILATVYGPH 56
[86][TOP]
>UniRef100_Q5AMR4 Likely exosome component Ski6p n=1 Tax=Candida albicans
RepID=Q5AMR4_CANAL
Length = 240
Score = 63.5 bits (153), Expect = 8e-09
Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVTRRS 464
ME SPEGLR+DGRR ELRR C+++ N +DGS+ E GNTKV+ V GP RS
Sbjct: 1 MELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVMCTVQGPIEPALRS 60
Query: 465 ELREEGA 485
+ E A
Sbjct: 61 QQHSERA 67
[87][TOP]
>UniRef100_C4YHN7 Exosome complex exonuclease RRP41 n=1 Tax=Candida albicans
RepID=C4YHN7_CANAL
Length = 240
Score = 63.5 bits (153), Expect = 8e-09
Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVTRRS 464
ME SPEGLR+DGRR ELRR C+++ N +DGS+ E GNTKV+ V GP RS
Sbjct: 1 MELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVMCTVQGPIEPALRS 60
Query: 465 ELREEGA 485
+ E A
Sbjct: 61 QQHSERA 67
[88][TOP]
>UniRef100_B8D6B9 Probable exosome complex exonuclease 1 n=1 Tax=Desulfurococcus
kamchatkensis 1221n RepID=B8D6B9_DESK1
Length = 242
Score = 63.5 bits (153), Expect = 8e-09
Identities = 29/46 (63%), Positives = 36/46 (78%)
Frame = +3
Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443
+GLR+DGR+P ELR + L VL NA+GSA+ E GNTK LAAV+GP
Sbjct: 10 DGLRIDGRKPEELRPVRIALGVLKNANGSALVEYGNTKALAAVYGP 55
[89][TOP]
>UniRef100_Q8TYC1 Probable exosome complex exonuclease 1 n=1 Tax=Methanopyrus
kandleri RepID=ECX1_METKA
Length = 239
Score = 63.5 bits (153), Expect = 8e-09
Identities = 30/65 (46%), Positives = 44/65 (67%)
Frame = +3
Query: 297 VSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 476
+S +GLRLDGR+P E+R + Q VL ADGSA E+G K++AAV+GP + R + +
Sbjct: 9 ISEDGLRLDGRKPDEMRPLKIQAGVLKRADGSAYLELGANKIVAAVYGPRELHPRHKQKP 68
Query: 477 EGALV 491
+ A+V
Sbjct: 69 DRAVV 73
[90][TOP]
>UniRef100_UPI0000DB6F09 PREDICTED: similar to putative exosome complex exonuclease RRP41
n=1 Tax=Apis mellifera RepID=UPI0000DB6F09
Length = 268
Score = 63.2 bits (152), Expect = 1e-08
Identities = 35/70 (50%), Positives = 43/70 (61%), Gaps = 3/70 (4%)
Frame = +3
Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHA---VTRRSELREE 479
GLRLDGRR ELR+I ++ V ADGSA E GNTK+L V+GPH T RS +
Sbjct: 12 GLRLDGRRALELRQIRIKMGVFGQADGSAYIEHGNTKILVTVYGPHQPRNSTGRSTSKIT 71
Query: 480 GALVVCE*SM 509
+V C+ SM
Sbjct: 72 KGIVNCQYSM 81
[91][TOP]
>UniRef100_B5IEJ8 Exosome complex exonuclease 1 n=1 Tax=Aciduliprofundum boonei T469
RepID=B5IEJ8_9EURY
Length = 243
Score = 63.2 bits (152), Expect = 1e-08
Identities = 31/76 (40%), Positives = 44/76 (57%)
Frame = +3
Query: 282 SSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461
S ++ + GLR+DGR P +LR I ++ VL ADGSA E G K++AAV+GPH +
Sbjct: 3 SDIKLIDDNGLRIDGRLPNQLRPIKMEVGVLKRADGSAFIEWGGNKIIAAVYGPHEAYPK 62
Query: 462 SELREEGALVVCE*SM 509
+ A+V SM
Sbjct: 63 HVQEADRAIVRARYSM 78
[92][TOP]
>UniRef100_Q6CRE8 KLLA0D09625p n=1 Tax=Kluyveromyces lactis RepID=Q6CRE8_KLULA
Length = 245
Score = 62.8 bits (151), Expect = 1e-08
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455
+S E SPEGLR+DGRR ELR NC ++ N ADGS+ E GN K++ V GP +
Sbjct: 1 MSRFEIYSPEGLRVDGRRWNELRSFNCSINTHPNAADGSSYLEQGNNKIITLVAGPQEPS 60
Query: 456 RRSELREEGA 485
RS++ + A
Sbjct: 61 SRSQVNTKQA 70
[93][TOP]
>UniRef100_C5M243 Exosome complex exonuclease RRP41 n=1 Tax=Candida tropicalis
MYA-3404 RepID=C5M243_CANTT
Length = 240
Score = 62.8 bits (151), Expect = 1e-08
Identities = 34/67 (50%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVTRRS 464
ME SPEGLR+DGRR ELRR C+++ N +DGS+ E GNTKV+ V GP RS
Sbjct: 1 MELYSPEGLRIDGRRWNELRRFECRINTHPNSSDGSSYVEQGNTKVVCTVQGPIEPQLRS 60
Query: 465 ELREEGA 485
+ E A
Sbjct: 61 QQHSEHA 67
[94][TOP]
>UniRef100_C5E0D5 ZYRO0G11814p n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5E0D5_ZYGRC
Length = 245
Score = 62.8 bits (151), Expect = 1e-08
Identities = 33/72 (45%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455
+S E SPEGLR+DGRR ELRR +C ++ S+ ADGS+ E GN K++ V GP +
Sbjct: 1 MSRFEIYSPEGLRVDGRRWNELRRFDCSINTHSHAADGSSYLEQGNNKIITLVKGPKEPS 60
Query: 456 RRSELREEGALV 491
RS++ AL+
Sbjct: 61 LRSQMDPTKALL 72
[95][TOP]
>UniRef100_Q4DGF6 Exosome complex exonuclease RRP41A, putative (Fragment) n=1
Tax=Trypanosoma cruzi RepID=Q4DGF6_TRYCR
Length = 195
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/70 (41%), Positives = 40/70 (57%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
E++SP GLRLDGRRP+E RR+ + + DG G V A+V+GP VT R E
Sbjct: 6 EYISPAGLRLDGRRPQESRRMTLEFGKVLGCDGCCTVMSGLATVCASVYGPREVTNRLES 65
Query: 471 REEGALVVCE 500
+ ++ CE
Sbjct: 66 KYNECIITCE 75
[96][TOP]
>UniRef100_C5A2B9 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus
gammatolerans EJ3 RepID=ECX1_THEGJ
Length = 249
Score = 61.6 bits (148), Expect = 3e-08
Identities = 29/68 (42%), Positives = 44/68 (64%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
++ + G R+DGRR ELR+I+ ++ VL NADGSA E G K+LAAV+GP + +
Sbjct: 8 LKLIDENGRRIDGRRKYELRKIHMEVGVLKNADGSAYIEWGKNKILAAVYGPREIHPKHL 67
Query: 468 LREEGALV 491
R + A++
Sbjct: 68 QRPDTAVL 75
[97][TOP]
>UniRef100_Q75C81 ACR035Wp n=1 Tax=Eremothecium gossypii RepID=Q75C81_ASHGO
Length = 246
Score = 61.2 bits (147), Expect = 4e-08
Identities = 32/66 (48%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDV-LSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
E SPEGLRLDGRR ELRR C ++ + ADGS+ E GN K++ V GPH RS+
Sbjct: 5 EIYSPEGLRLDGRRWNELRRFECSINTHPTAADGSSYLEQGNNKLITLVTGPHEPALRSQ 64
Query: 468 LREEGA 485
+ A
Sbjct: 65 VNPSKA 70
[98][TOP]
>UniRef100_A7TII5 Putative uncharacterized protein n=1 Tax=Vanderwaltozyma polyspora
DSM 70294 RepID=A7TII5_VANPO
Length = 246
Score = 61.2 bits (147), Expect = 4e-08
Identities = 32/65 (49%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNA-DGSAIFEMGNTKVLAAVFGPHAVT 455
+S E SPEGLRLDGRR ELRR C ++ ++A DGS+ E GN K++ V GP
Sbjct: 1 MSRFELYSPEGLRLDGRRWNELRRFECSINTHAHASDGSSYLEQGNNKIVTLVKGPQEPI 60
Query: 456 RRSEL 470
RS+L
Sbjct: 61 LRSQL 65
[99][TOP]
>UniRef100_C5KIM5 Exosome complex exonuclease RRP41, putative n=1 Tax=Perkinsus
marinus ATCC 50983 RepID=C5KIM5_9ALVE
Length = 248
Score = 60.8 bits (146), Expect = 5e-08
Identities = 31/66 (46%), Positives = 41/66 (62%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
EF++ EG RLDGRRP ELR + ++ +ADGSA + G TKV+A VFGP + S
Sbjct: 6 EFLTYEGFRLDGRRPNELRHLTLKIGDAPSADGSATLQQGLTKVVAHVFGPRPLQAASVG 65
Query: 471 REEGAL 488
R G +
Sbjct: 66 RAAGTM 71
[100][TOP]
>UniRef100_C4Q0C5 Ribonuclease pH related n=1 Tax=Schistosoma mansoni
RepID=C4Q0C5_SCHMA
Length = 258
Score = 60.8 bits (146), Expect = 5e-08
Identities = 28/64 (43%), Positives = 40/64 (62%)
Frame = +3
Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGAL 488
G R+DGRRP E+RR++CQ +DG GNTKV+A+V GPHA + + +GA
Sbjct: 8 GRRVDGRRPNEIRRVDCQFGS-GYSDGIVFLHQGNTKVIASVVGPHAPRVKGDGTPDGAT 66
Query: 489 VVCE 500
+ C+
Sbjct: 67 ITCQ 70
[101][TOP]
>UniRef100_A7RQ94 Predicted protein n=1 Tax=Nematostella vectensis RepID=A7RQ94_NEMVE
Length = 268
Score = 60.8 bits (146), Expect = 5e-08
Identities = 32/68 (47%), Positives = 41/68 (60%)
Frame = +3
Query: 297 VSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 476
+ +G R DGRRP ELR + + V+S A GSA EM NTKV+ A++GP RR E
Sbjct: 30 IRKDGCRQDGRRPDELRPMFLRAGVVSQAKGSAYIEMKNTKVICAIYGPREAPRRQEFSM 89
Query: 477 EGALVVCE 500
+G L CE
Sbjct: 90 KGRL-TCE 96
[102][TOP]
>UniRef100_Q4DZV2 Ribosomal RNA processing protein 41A, putative n=1 Tax=Trypanosoma
cruzi RepID=Q4DZV2_TRYCR
Length = 252
Score = 60.5 bits (145), Expect = 6e-08
Identities = 28/70 (40%), Positives = 40/70 (57%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
E+++P GLRLDGRRP+E RR+ + + DG G V A+V+GP VT R E
Sbjct: 6 EYINPAGLRLDGRRPQESRRMTLEFGKVLGCDGCCTVMSGLATVCASVYGPREVTNRLES 65
Query: 471 REEGALVVCE 500
+ ++ CE
Sbjct: 66 KYNECIITCE 75
[103][TOP]
>UniRef100_C7DI01 3' exoribonuclease n=1 Tax=Candidatus Micrarchaeum acidiphilum
ARMAN-2 RepID=C7DI01_9EURY
Length = 246
Score = 60.5 bits (145), Expect = 6e-08
Identities = 32/68 (47%), Positives = 41/68 (60%)
Frame = +3
Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGA 485
+G RLDGR ELR + + +L+NA+GSA E GN KVLAAV+GP T R A
Sbjct: 13 DGKRLDGRDFNELRPLKIEAGILANANGSAYLEWGNNKVLAAVYGPKEATPRHLADTNKA 72
Query: 486 LVVCE*SM 509
++ C SM
Sbjct: 73 IIKCRYSM 80
[104][TOP]
>UniRef100_B7R2K9 Exosome complex exonuclease 1 n=1 Tax=Thermococcus sp. AM4
RepID=B7R2K9_9EURY
Length = 248
Score = 60.5 bits (145), Expect = 6e-08
Identities = 28/68 (41%), Positives = 44/68 (64%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
++ + G R+DGR+ ELR+I+ ++ VL NADGSA E G K+LAAV+GP + +
Sbjct: 7 LKLIDENGRRIDGRKKYELRKIHMEVGVLKNADGSAYIEWGKNKILAAVYGPREIHPKHL 66
Query: 468 LREEGALV 491
R + A++
Sbjct: 67 QRPDTAVL 74
[105][TOP]
>UniRef100_A5DGL1 Putative uncharacterized protein n=1 Tax=Pichia guilliermondii
RepID=A5DGL1_PICGU
Length = 242
Score = 60.1 bits (144), Expect = 8e-08
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNAD-GSAIFEMGNTKVLAAVFGPHAVT 455
+S +E SPEGLR+DGRR ELRR C+++ N+ GS+ E GNTKV+ V GP
Sbjct: 1 MSRLELYSPEGLRVDGRRWNELRRFECKINTHPNSSTGSSYVEQGNTKVICMVEGPSEPE 60
Query: 456 RRSEL 470
RS++
Sbjct: 61 TRSQV 65
[106][TOP]
>UniRef100_A3GGM6 Predicted protein n=1 Tax=Pichia stipitis RepID=A3GGM6_PICST
Length = 241
Score = 60.1 bits (144), Expect = 8e-08
Identities = 31/67 (46%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVTRRS 464
ME SPEGLR+DGRR E+R C+++ N +DGS+ E GNTKV+ V GP RS
Sbjct: 1 MELYSPEGLRIDGRRWNEIRNFECRINTHPNSSDGSSYIEQGNTKVICVVQGPMEPALRS 60
Query: 465 ELREEGA 485
+ A
Sbjct: 61 QANSNEA 67
[107][TOP]
>UniRef100_Q8PTT8 Probable exosome complex exonuclease 1 n=1 Tax=Methanosarcina mazei
RepID=ECX1_METMA
Length = 493
Score = 60.1 bits (144), Expect = 8e-08
Identities = 28/69 (40%), Positives = 41/69 (59%)
Frame = +3
Query: 285 SMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRS 464
++ ++ +GLRLDGRR E+R + ++ VLS ADGS E G K+L VFGP R
Sbjct: 7 NLTLITDDGLRLDGRRADEIRPMKIEVGVLSRADGSCYLEWGRNKILVGVFGPREAHPRR 66
Query: 465 ELREEGALV 491
R + A++
Sbjct: 67 SQRADSAVI 75
[108][TOP]
>UniRef100_B1L6N7 Exosome complex exonuclease 1 n=1 Tax=Candidatus Korarchaeum
cryptofilum OPF8 RepID=B1L6N7_KORCO
Length = 248
Score = 59.7 bits (143), Expect = 1e-07
Identities = 29/65 (44%), Positives = 40/65 (61%)
Frame = +3
Query: 297 VSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 476
++ EG+R DGR P E+R I + VL ADGSA E G ++LAAVFGP V + +
Sbjct: 13 ITEEGIRTDGRLPHEMRPIKMMVGVLEKADGSAFVEWGGNRILAAVFGPREVHPKHMVLP 72
Query: 477 EGALV 491
+ AL+
Sbjct: 73 DRALI 77
[109][TOP]
>UniRef100_A2BKC0 Probable exosome complex exonuclease 1 n=1 Tax=Hyperthermus
butylicus DSM 5456 RepID=ECX1_HYPBU
Length = 255
Score = 59.3 bits (142), Expect = 1e-07
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = +3
Query: 312 LRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGALV 491
+R DGR P +LR I ++ VLSNADGSA+ E G T+V+AAV+GP R + A++
Sbjct: 24 IRHDGRLPEQLRPIRMEVGVLSNADGSALVEYGGTRVIAAVYGPREAHPRHVALPDRAII 83
Query: 492 VC 497
C
Sbjct: 84 RC 85
[110][TOP]
>UniRef100_UPI000151B3FA hypothetical protein PGUG_02412 n=1 Tax=Pichia guilliermondii ATCC
6260 RepID=UPI000151B3FA
Length = 242
Score = 58.9 bits (141), Expect = 2e-07
Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNA-DGSAIFEMGNTKVLAAVFGPHAVT 455
+S +E SPEGLR+DGRR ELRR C+++ N+ GS+ E GNTKV+ V GP
Sbjct: 1 MSRLELYSPEGLRVDGRRWNELRRFECKINTHPNSLTGSSYVEQGNTKVICMVEGPLEPE 60
Query: 456 RRSEL 470
RS++
Sbjct: 61 TRSQV 65
[111][TOP]
>UniRef100_Q5JIR6 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus
kodakarensis RepID=ECX1_PYRKO
Length = 249
Score = 58.9 bits (141), Expect = 2e-07
Identities = 29/68 (42%), Positives = 42/68 (61%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
++ + G R+DGR+ ELR I ++ VL NADGSA E G KVLAAV+GP + +
Sbjct: 8 LKLIDENGKRIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKVLAAVYGPREIHPKHL 67
Query: 468 LREEGALV 491
R + A++
Sbjct: 68 QRPDRAIL 75
[112][TOP]
>UniRef100_B5IVS6 Exosome complex exonuclease 1 n=1 Tax=Thermococcus barophilus MP
RepID=B5IVS6_9EURY
Length = 247
Score = 58.5 bits (140), Expect = 2e-07
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
++ + G R+DGR+ ELR I ++ VL NADGSA E G K+LAAV+GP + +
Sbjct: 8 IKLIDENGRRIDGRKKYELRPIKMEVGVLKNADGSAYIEWGKNKILAAVYGPREIHPKHL 67
Query: 468 LREEGALV 491
R + A++
Sbjct: 68 QRPDRAIL 75
[113][TOP]
>UniRef100_B6YSI2 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus
onnurineus NA1 RepID=ECX1_THEON
Length = 249
Score = 58.5 bits (140), Expect = 2e-07
Identities = 28/68 (41%), Positives = 42/68 (61%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
++ + G R+DGR+ ELR I ++ VL NADGSA E G K+LAAV+GP + +
Sbjct: 8 LKLIDENGRRIDGRKKYELRPIKMEVGVLKNADGSAYVEWGKNKILAAVYGPREIHPKHL 67
Query: 468 LREEGALV 491
R + A++
Sbjct: 68 QRPDRAIL 75
[114][TOP]
>UniRef100_B9IKJ0 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IKJ0_POPTR
Length = 243
Score = 58.2 bits (139), Expect = 3e-07
Identities = 30/63 (47%), Positives = 42/63 (66%)
Frame = +3
Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGA 485
E R DGR P +LR ++C +VL A GSA + G+TKVLAAV+GP A T+++E E+
Sbjct: 2 ESDRDDGRSPSQLRPLSCARNVLHRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKAC 61
Query: 486 LVV 494
+ V
Sbjct: 62 IEV 64
[115][TOP]
>UniRef100_Q6FSM7 Strain CBS138 chromosome G complete sequence n=1 Tax=Candida
glabrata RepID=Q6FSM7_CANGA
Length = 246
Score = 58.2 bits (139), Expect = 3e-07
Identities = 32/72 (44%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455
+S +E SPEGLRLDGRR ELRR ++ + ADGS+ E GN KV+ V GP T
Sbjct: 1 MSRVEIYSPEGLRLDGRRWNELRRFESAINTHPHAADGSSYLEQGNNKVITLVKGPKEPT 60
Query: 456 RRSELREEGALV 491
+S++ + A++
Sbjct: 61 LKSQMDIQKAIL 72
[116][TOP]
>UniRef100_Q2NEX5 Putative exosome complex, exonuclease 1 subunit n=1
Tax=Methanosphaera stadtmanae DSM 3091
RepID=Q2NEX5_METST
Length = 232
Score = 58.2 bits (139), Expect = 3e-07
Identities = 27/68 (39%), Positives = 42/68 (61%)
Frame = +3
Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGA 485
E +R DGR LR + ++ VL+NADGSA E GN K+L V+GP + + + +GA
Sbjct: 4 EFIRKDGRAYNTLRNMKMEVGVLNNADGSAYIECGNNKILVGVYGPREIHSKKHSKPDGA 63
Query: 486 LVVCE*SM 509
++ C+ +M
Sbjct: 64 VLRCKYNM 71
[117][TOP]
>UniRef100_A0B8W3 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Methanosaeta
thermophila PT RepID=A0B8W3_METTP
Length = 245
Score = 58.2 bits (139), Expect = 3e-07
Identities = 29/52 (55%), Positives = 36/52 (69%)
Frame = +3
Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461
+G+RLDGRR ELR I ++ VL ADGS EMG+ KV+AAV+GP V R
Sbjct: 9 DGIRLDGRRFDELRPIKMEVGVLKRADGSCYMEMGDNKVIAAVYGPREVHPR 60
[118][TOP]
>UniRef100_C8S7M6 Exosome complex exonuclease 1 n=1 Tax=Ferroglobus placidus DSM
10642 RepID=C8S7M6_FERPL
Length = 245
Score = 58.2 bits (139), Expect = 3e-07
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = +3
Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV 452
+G R+DGR P ELR I + VL NADGS EMG KV+AAV+GP V
Sbjct: 10 DGRRIDGRLPDELRPIKIEAGVLKNADGSCYLEMGKNKVMAAVYGPRKV 58
[119][TOP]
>UniRef100_O42872 Exosome complex component ski6 n=1 Tax=Schizosaccharomyces pombe
RepID=RRP41_SCHPO
Length = 242
Score = 58.2 bits (139), Expect = 3e-07
Identities = 31/74 (41%), Positives = 43/74 (58%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
+S E +S EGLR DGRR E+R C++ + + +GSA E+GNTKVL V GP
Sbjct: 1 MSHFEILSLEGLRNDGRRWDEMRNFQCRIGIEPSENGSAFIELGNTKVLCIVDGPSEPVI 60
Query: 459 RSELREEGALVVCE 500
+S+ R + V E
Sbjct: 61 KSKARADRTFVNVE 74
[120][TOP]
>UniRef100_O29757 Probable exosome complex exonuclease 1 n=1 Tax=Archaeoglobus
fulgidus RepID=ECX1_ARCFU
Length = 258
Score = 58.2 bits (139), Expect = 3e-07
Identities = 30/52 (57%), Positives = 34/52 (65%)
Frame = +3
Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461
+GLRLDGR+ ELR I + VL ADGS EMG KV+AAVFGP V R
Sbjct: 14 DGLRLDGRKFDELRPIKIEASVLKRADGSCYLEMGKNKVIAAVFGPREVHPR 65
[121][TOP]
>UniRef100_Q01E66 Putative exonuclease RRP41 (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q01E66_OSTTA
Length = 321
Score = 57.8 bits (138), Expect = 4e-07
Identities = 34/72 (47%), Positives = 43/72 (59%)
Frame = +3
Query: 282 SSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461
++ME+VS EGLRLDGRR E+RR + + DGSA FE+GNT + V GP R+
Sbjct: 50 ATMEYVSFEGLRLDGRRANEIRRPRHAFAIDAQCDGSARFELGNTVIECRVDGPS--ERK 107
Query: 462 SELREEGALVVC 497
EEGA C
Sbjct: 108 FGGAEEGASEAC 119
[122][TOP]
>UniRef100_Q469M3 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Methanosarcina
barkeri str. Fusaro RepID=Q469M3_METBF
Length = 501
Score = 57.8 bits (138), Expect = 4e-07
Identities = 28/67 (41%), Positives = 39/67 (58%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
+ ++ +GLRLDGR E+R + ++ VLS ADGS E G KVL VFGP R
Sbjct: 7 KLITDDGLRLDGRHADEIRPMKIEIGVLSRADGSCYLEWGRNKVLVGVFGPREAHPRRSQ 66
Query: 471 REEGALV 491
R + A++
Sbjct: 67 RADTAVI 73
[123][TOP]
>UniRef100_A0RXU1 Probable exosome complex exonuclease 1 n=1 Tax=Cenarchaeum
symbiosum RepID=ECX1_CENSY
Length = 243
Score = 57.8 bits (138), Expect = 4e-07
Identities = 28/76 (36%), Positives = 43/76 (56%)
Frame = +3
Query: 270 GEHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHA 449
G + + + G+R DGR+ E RR+ VL+NA+GSA E G+ K+LA +FGP
Sbjct: 2 GGRDTDVVLLDENGIRCDGRKISETRRVEITAGVLNNANGSAYIEFGDNKILAGIFGPRD 61
Query: 450 VTRRSELREEGALVVC 497
V + +R E ++ C
Sbjct: 62 VHPKHMVRTETGILRC 77
[124][TOP]
>UniRef100_Q9YC03 Probable exosome complex exonuclease 1 n=1 Tax=Aeropyrum pernix
RepID=ECX1_AERPE
Length = 246
Score = 57.8 bits (138), Expect = 4e-07
Identities = 27/52 (51%), Positives = 36/52 (69%)
Frame = +3
Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461
+G R DGR P +LR + Q+ +L NADGSA+ E G T+VLAAV+GP +R
Sbjct: 14 DGRRHDGRLPEDLRPVRMQVGILHNADGSALVEFGRTRVLAAVYGPREPHQR 65
[125][TOP]
>UniRef100_Q38AL8 Exosome complex exonuclease RRP41A n=1 Tax=Trypanosoma brucei
RepID=Q38AL8_9TRYP
Length = 252
Score = 57.4 bits (137), Expect = 5e-07
Identities = 27/70 (38%), Positives = 39/70 (55%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
E+++P GLRLDGRRP E RR+ + +S DG G + V A V+GP V+ R E
Sbjct: 6 EYINPAGLRLDGRRPNEPRRLALEFGKISGCDGCCTVVSGLSHVCATVYGPREVSNRLEG 65
Query: 471 REEGALVVCE 500
+ + C+
Sbjct: 66 KYNEVTITCD 75
[126][TOP]
>UniRef100_B2WKB1 Exosome complex exonuclease RRP41 n=1 Tax=Pyrenophora
tritici-repentis Pt-1C-BFP RepID=B2WKB1_PYRTR
Length = 250
Score = 57.4 bits (137), Expect = 5e-07
Identities = 27/45 (60%), Positives = 33/45 (73%)
Frame = +3
Query: 312 LRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPH 446
LRLDGRR ELRRI+ Q+ + ADGS+ E GNTK+L +V GPH
Sbjct: 13 LRLDGRRWNELRRIHAQISTQAAADGSSYLEQGNTKILVSVTGPH 57
[127][TOP]
>UniRef100_Q2HRD9 Peptidase S8 and S53, subtilisin, kexin, sedolisin; 3
exoribonuclease n=1 Tax=Medicago truncatula
RepID=Q2HRD9_MEDTR
Length = 241
Score = 57.0 bits (136), Expect = 7e-07
Identities = 29/60 (48%), Positives = 39/60 (65%)
Frame = +3
Query: 315 RLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGALVV 494
R DGR P +LR + C VL A GSA + G TKVLAAV+GP A T+++E E+ ++ V
Sbjct: 5 RPDGRSPNQLRPLACSHSVLHRAHGSATWAQGETKVLAAVYGPKAGTKKNENPEKASIEV 64
[128][TOP]
>UniRef100_B3LI42 Exosome complex exonuclease RRP41 n=1 Tax=Saccharomyces cerevisiae
RM11-1a RepID=B3LI42_YEAS1
Length = 246
Score = 57.0 bits (136), Expect = 7e-07
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455
+S +E SPEGLRLDGRR ELRR ++ + ADGS+ E GN K++ V GP
Sbjct: 1 MSRLEIYSPEGLRLDGRRWNELRRFESSINTHPHAADGSSYMEQGNNKIITLVKGPKEPR 60
Query: 456 RRSELREEGALV 491
+S++ AL+
Sbjct: 61 LKSQMDTSKALL 72
[129][TOP]
>UniRef100_P46948 Exosome complex component SKI6 n=5 Tax=Saccharomyces cerevisiae
RepID=RRP41_YEAST
Length = 246
Score = 57.0 bits (136), Expect = 7e-07
Identities = 31/72 (43%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSN-ADGSAIFEMGNTKVLAAVFGPHAVT 455
+S +E SPEGLRLDGRR ELRR ++ + ADGS+ E GN K++ V GP
Sbjct: 1 MSRLEIYSPEGLRLDGRRWNELRRFESSINTHPHAADGSSYMEQGNNKIITLVKGPKEPR 60
Query: 456 RRSELREEGALV 491
+S++ AL+
Sbjct: 61 LKSQMDTSKALL 72
[130][TOP]
>UniRef100_Q0W2Y8 Putative exosome complex exonuclease 1 n=1 Tax=uncultured
methanogenic archaeon RC-I RepID=Q0W2Y8_UNCMA
Length = 253
Score = 56.6 bits (135), Expect = 9e-07
Identities = 32/71 (45%), Positives = 40/71 (56%)
Frame = +3
Query: 279 ISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTR 458
+S E + +G RLDGR P +LR I Q VL ADGS E G KV+AAV+GP V
Sbjct: 1 MSKPEKLIVDGKRLDGRGPFDLRPIKFQAGVLKRADGSCYLEFGGNKVMAAVYGPREVHP 60
Query: 459 RSELREEGALV 491
R + A+V
Sbjct: 61 RHLQQASNAIV 71
[131][TOP]
>UniRef100_Q8U0L9 Probable exosome complex exonuclease 1 n=1 Tax=Pyrococcus furiosus
RepID=ECX1_PYRFU
Length = 250
Score = 56.6 bits (135), Expect = 9e-07
Identities = 27/68 (39%), Positives = 42/68 (61%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSE 467
++ + G RLDGR+ ELR I ++ VL NA+GSA E G K++AAV+GP + +
Sbjct: 8 LKLIDENGRRLDGRKKYELRPIKMKVGVLKNANGSAYIEWGKNKIIAAVYGPREIHPKHL 67
Query: 468 LREEGALV 491
R + A++
Sbjct: 68 QRPDRAIL 75
[132][TOP]
>UniRef100_D0A3H8 Exosome complex exonuclease RRP41A (Rrp41p homologue, putative) n=1
Tax=Trypanosoma brucei gambiense DAL972
RepID=D0A3H8_TRYBG
Length = 252
Score = 56.2 bits (134), Expect = 1e-06
Identities = 26/70 (37%), Positives = 39/70 (55%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
E+++P GLRLDGRRP E RR+ + +S DG G + V A V+GP V+ R +
Sbjct: 6 EYINPAGLRLDGRRPNEPRRLALEFGKISGCDGCCTVVSGLSHVCATVYGPREVSNRLDG 65
Query: 471 REEGALVVCE 500
+ + C+
Sbjct: 66 KYNEVTITCD 75
[133][TOP]
>UniRef100_Q0V679 Putative uncharacterized protein n=1 Tax=Phaeosphaeria nodorum
RepID=Q0V679_PHANO
Length = 251
Score = 56.2 bits (134), Expect = 1e-06
Identities = 27/44 (61%), Positives = 33/44 (75%)
Frame = +3
Query: 312 LRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443
LRLDGRR ELRRI+ Q+ + ADGS+ EMGNTK+L +V GP
Sbjct: 13 LRLDGRRWNELRRIHAQISTQAAADGSSYLEMGNTKILVSVTGP 56
[134][TOP]
>UniRef100_C6A456 Probable exosome complex exonuclease 1 n=1 Tax=Thermococcus
sibiricus MM 739 RepID=C6A456_THESM
Length = 246
Score = 56.2 bits (134), Expect = 1e-06
Identities = 24/55 (43%), Positives = 37/55 (67%)
Frame = +3
Query: 288 MEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV 452
++ + G R+DGR+ ELR+I ++ VL +ADGSA E G K++AAV+GP +
Sbjct: 7 LKLIDENGYRVDGRKKYELRKIKMEVGVLKSADGSAYVEWGKNKIMAAVYGPREI 61
[135][TOP]
>UniRef100_B6K3J3 Exosome complex exonuclease RRP41 n=1 Tax=Schizosaccharomyces
japonicus yFS275 RepID=B6K3J3_SCHJY
Length = 243
Score = 55.8 bits (133), Expect = 2e-06
Identities = 29/73 (39%), Positives = 42/73 (57%)
Frame = +3
Query: 282 SSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461
S E +S EGLR DGRR E+R +C++ V A GS+ + GNT+VL V GP +
Sbjct: 3 SHYEVISAEGLRQDGRRWNEMREFDCRIGVEKTAHGSSFIQHGNTRVLCNVNGPSEPYIK 62
Query: 462 SELREEGALVVCE 500
+ ++E A + E
Sbjct: 63 GKSKQEKAFINVE 75
[136][TOP]
>UniRef100_O59223 Probable exosome complex exonuclease 1 n=1 Tax=Pyrococcus
horikoshii RepID=ECX1_PYRHO
Length = 249
Score = 55.8 bits (133), Expect = 2e-06
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = +3
Query: 273 EHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV 452
E ++ + G R+DGR+ ELR I ++ VL NA+GSA E G K++AAV+GP +
Sbjct: 3 EKPEGLKLIDENGRRIDGRKKYELRPIKMKVGVLKNANGSAYIEWGRNKIIAAVYGPREL 62
Query: 453 TRRSELREEGALV 491
+ R + A++
Sbjct: 63 HSKHLQRPDRAIL 75
[137][TOP]
>UniRef100_Q9V119 Probable exosome complex exonuclease 1 n=1 Tax=Pyrococcus abyssi
RepID=ECX1_PYRAB
Length = 249
Score = 55.8 bits (133), Expect = 2e-06
Identities = 27/73 (36%), Positives = 43/73 (58%)
Frame = +3
Query: 273 EHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV 452
E ++ + G R+DGR+ ELR I ++ VL NA+GSA E G K++AAV+GP +
Sbjct: 3 EKPEGLKLIDENGRRIDGRKKYELRPIKMEVGVLKNANGSAYIEWGKNKIIAAVYGPREL 62
Query: 453 TRRSELREEGALV 491
+ R + A++
Sbjct: 63 HPKHLQRPDRAIL 75
[138][TOP]
>UniRef100_Q6CA11 YALI0D06776p n=1 Tax=Yarrowia lipolytica RepID=Q6CA11_YARLI
Length = 287
Score = 55.5 bits (132), Expect = 2e-06
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Frame = +3
Query: 225 LPKFNTLYTQRSGD*GEHISSMEFVSPEGLRLDGRRPRELRRINCQLDV-LSNADGSAIF 401
LP +++ TQ S E SPEGLR DGRR E+R +C+++ ++ADGS+
Sbjct: 38 LPSYSSPLTQ---------SRHEIYSPEGLRTDGRRWNEIRNFDCKINTHPTSADGSSYV 88
Query: 402 EMGNTKVLAAVFGPHAVTRRSELREEGALVV 494
E G+TKV+ V GP R + + V
Sbjct: 89 EWGHTKVVCTVDGPREPDNRQNTTDRAVISV 119
[139][TOP]
>UniRef100_B3TBC6 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
marine crenarchaeote HF4000_APKG8O8 RepID=B3TBC6_9ARCH
Length = 245
Score = 55.5 bits (132), Expect = 2e-06
Identities = 26/61 (42%), Positives = 35/61 (57%)
Frame = +3
Query: 270 GEHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHA 449
G + + + G+R DGR+ E R++ + VL NADGSA E G K+LA VFGP
Sbjct: 2 GGRETDLVLLDENGIRCDGRKVNETRKVTIKAGVLKNADGSAYIEFGGNKILAGVFGPRD 61
Query: 450 V 452
V
Sbjct: 62 V 62
[140][TOP]
>UniRef100_B3TAN7 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
marine crenarchaeote HF4000_APKG8G2 RepID=B3TAN7_9ARCH
Length = 245
Score = 55.5 bits (132), Expect = 2e-06
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = +3
Query: 270 GEHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHA 449
G + + + G+R DGR+ E R++ ++ VL NADGSA E G K+LA VFGP
Sbjct: 2 GGRETDVVLLDENGIRSDGRKVNETRKVTIKVGVLKNADGSAYIEFGGNKILAGVFGPRD 61
Query: 450 V 452
V
Sbjct: 62 V 62
[141][TOP]
>UniRef100_B3T985 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
marine crenarchaeote HF4000_APKG6J21 RepID=B3T985_9ARCH
Length = 245
Score = 55.5 bits (132), Expect = 2e-06
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = +3
Query: 270 GEHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHA 449
G + + + G+R DGR+ E R++ ++ VL NADGSA E G K+LA VFGP
Sbjct: 2 GGRETDVVLLDENGIRSDGRKVNETRKVTIKVGVLKNADGSAYIEFGGNKILAGVFGPRD 61
Query: 450 V 452
V
Sbjct: 62 V 62
[142][TOP]
>UniRef100_B3T8C1 Putative 3' exoribonuclease family, domain 1 n=1 Tax=uncultured
marine crenarchaeote HF4000_APKG5E24 RepID=B3T8C1_9ARCH
Length = 245
Score = 55.5 bits (132), Expect = 2e-06
Identities = 26/61 (42%), Positives = 36/61 (59%)
Frame = +3
Query: 270 GEHISSMEFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHA 449
G + + + G+R DGR+ E R++ ++ VL NADGSA E G K+LA VFGP
Sbjct: 2 GGRETDVVLLDENGIRSDGRKVNETRKVTIKVGVLKNADGSAYIEFGGNKILAGVFGPRD 61
Query: 450 V 452
V
Sbjct: 62 V 62
[143][TOP]
>UniRef100_Q9LX74 AT3G46210 protein n=1 Tax=Arabidopsis thaliana RepID=Q9LX74_ARATH
Length = 239
Score = 55.1 bits (131), Expect = 3e-06
Identities = 27/60 (45%), Positives = 38/60 (63%)
Frame = +3
Query: 315 RLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGALVV 494
R DGR P +LR + C ++L GSA + G+TKVLAAV+GP A T+++E E+ V
Sbjct: 5 REDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKACFEV 64
[144][TOP]
>UniRef100_B9H8Z6 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9H8Z6_POPTR
Length = 243
Score = 55.1 bits (131), Expect = 3e-06
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = +3
Query: 315 RLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGALVV 494
R DGR P +LR ++C +VL A GSA + G+TKV AAV+GP A T+++E E+ + V
Sbjct: 5 RDDGRSPSQLRPLSCSHNVLHRAHGSASWSQGDTKVSAAVYGPKAGTKKNENPEKACVEV 64
[145][TOP]
>UniRef100_Q5TMQ4 AGAP011906-PA n=1 Tax=Anopheles gambiae RepID=Q5TMQ4_ANOGA
Length = 308
Score = 55.1 bits (131), Expect = 3e-06
Identities = 27/66 (40%), Positives = 42/66 (63%)
Frame = +3
Query: 291 EFVSPEGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSEL 470
E + +G R DGRR +E R+ ++ V+S A GSA E+GNTKV+ +VF P + ++++
Sbjct: 35 EALGKDGKRKDGRRLQESRKYYAKIGVVSTAKGSAYVELGNTKVIVSVFDPREIPKQNKF 94
Query: 471 REEGAL 488
E G L
Sbjct: 95 CELGEL 100
[146][TOP]
>UniRef100_A7P578 Chromosome chr4 scaffold_6, whole genome shotgun sequence n=2
Tax=Vitis vinifera RepID=A7P578_VITVI
Length = 243
Score = 54.7 bits (130), Expect = 4e-06
Identities = 27/60 (45%), Positives = 40/60 (66%)
Frame = +3
Query: 315 RLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGALVV 494
R DGR +LR + C ++L+ A GSA + G+TKVLAAV+GP A T+++E E+ + V
Sbjct: 5 RDDGRTANQLRPLACSRNILNRAHGSASWSQGDTKVLAAVYGPKAGTKKNENPEKACIEV 64
[147][TOP]
>UniRef100_B9RRX9 Exosome complex exonuclease RRP46, putative n=1 Tax=Ricinus
communis RepID=B9RRX9_RICCO
Length = 211
Score = 54.7 bits (130), Expect = 4e-06
Identities = 28/60 (46%), Positives = 40/60 (66%)
Frame = +3
Query: 315 RLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGALVV 494
R DGR P +LR + C +VL+ A GSA + G+TKVLAAV+GP T+++E E+ + V
Sbjct: 5 RDDGRTPNQLRPLACSRNVLNRAHGSASWCQGDTKVLAAVYGPKPGTKKNENPEKACIEV 64
[148][TOP]
>UniRef100_A8A8Z2 Ribosomal RNA-processing protein RRP41/SKI6 n=1 Tax=Ignicoccus
hospitalis KIN4/I RepID=A8A8Z2_IGNH4
Length = 241
Score = 54.3 bits (129), Expect = 5e-06
Identities = 27/64 (42%), Positives = 40/64 (62%)
Frame = +3
Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGA 485
+G R DGR P +LR + ++ VL NADGSA +G T+V+AAV+GP R + + A
Sbjct: 12 DGKRHDGRGPADLRPLEMKVGVLYNADGSAWLRIGGTEVVAAVYGPREPPMRGMVLPDRA 71
Query: 486 LVVC 497
++ C
Sbjct: 72 VIRC 75
[149][TOP]
>UniRef100_A8MA84 Exosome complex exonuclease 1 n=1 Tax=Caldivirga maquilingensis
IC-167 RepID=A8MA84_CALMQ
Length = 242
Score = 53.9 bits (128), Expect = 6e-06
Identities = 26/46 (56%), Positives = 33/46 (71%)
Frame = +3
Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGP 443
+G R+DGR P E R + Q+ VL NA+GSA+ GNT VLAAV+GP
Sbjct: 12 DGKRVDGRLPEEHRPVTMQVGVLPNANGSALVAYGNTVVLAAVYGP 57
[150][TOP]
>UniRef100_C0PI41 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=C0PI41_MAIZE
Length = 149
Score = 53.5 bits (127), Expect = 8e-06
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +3
Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGAL 488
G R DGR P +LR C + L A GSA + G+T VLAAV+GP + TR+ E E+ ++
Sbjct: 5 GSRADGRNPNQLRPFTCTGNPLHRAHGSARWAQGDTVVLAAVYGPKSGTRKGENPEKASI 64
Query: 489 VV 494
V
Sbjct: 65 EV 66
[151][TOP]
>UniRef100_B8A1N7 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B8A1N7_MAIZE
Length = 240
Score = 53.5 bits (127), Expect = 8e-06
Identities = 28/62 (45%), Positives = 38/62 (61%)
Frame = +3
Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELREEGAL 488
G R DGR P +LR C + L A GSA + G+T VLAAV+GP + TR+ E E+ ++
Sbjct: 5 GSRADGRNPNQLRPFTCTGNPLHRAHGSARWAQGDTVVLAAVYGPKSGTRKGENPEKASI 64
Query: 489 VV 494
V
Sbjct: 65 EV 66
[152][TOP]
>UniRef100_A9US69 Predicted protein n=1 Tax=Monosiga brevicollis RepID=A9US69_MONBE
Length = 256
Score = 53.5 bits (127), Expect = 8e-06
Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Frame = +3
Query: 300 SPEGL-RLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRRSELRE 476
+P G R DGR P +LR ++C V S ADGSA F +G T V +VFG V RSEL +
Sbjct: 6 NPNGAAREDGRAPNQLRELSCDFAVNSAADGSARFRLGQTCVEVSVFGFRGVPVRSELPD 65
Query: 477 EGALVV 494
A+ V
Sbjct: 66 RSAIEV 71
[153][TOP]
>UniRef100_Q647V6 Ribonuclease PH n=1 Tax=uncultured archaeon GZfos9D1
RepID=Q647V6_9ARCH
Length = 245
Score = 53.5 bits (127), Expect = 8e-06
Identities = 27/52 (51%), Positives = 34/52 (65%)
Frame = +3
Query: 306 EGLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAVTRR 461
+G RLDGR ELR I ++ VL ADGS E+GN KV+AAV+GP + R
Sbjct: 10 DGKRLDGRGFDELRPIKIEVGVLKRADGSCYLELGNNKVIAAVYGPREMHPR 61
[154][TOP]
>UniRef100_A3MUP1 Probable exosome complex exonuclease 1 n=1 Tax=Pyrobaculum
calidifontis JCM 11548 RepID=ECX1_PYRCJ
Length = 246
Score = 53.5 bits (127), Expect = 8e-06
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +3
Query: 309 GLRLDGRRPRELRRINCQLDVLSNADGSAIFEMGNTKVLAAVFGPHAV-TRRSELREEGA 485
GLR DGR P ++R + Q+ +SNADGSA+ G T +AAV+GP + R L + G
Sbjct: 12 GLRADGRAPDQMREVQIQVGTVSNADGSAVVSYGATTAVAAVYGPREMHPRHLSLPDRGV 71
Query: 486 LVV 494
+ V
Sbjct: 72 MRV 74