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[1][TOP]
>UniRef100_P08475 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1
Tax=Chlamydomonas reinhardtii RepID=RBS2_CHLRE
Length = 185
Score = 248 bits (634), Expect(2) = 7e-74
Identities = 123/126 (97%), Positives = 123/126 (97%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL
Sbjct: 4 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 63
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL
Sbjct: 64 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 123
Query: 361 XMFVLR 378
MF R
Sbjct: 124 PMFGCR 129
Score = 52.8 bits (125), Expect(2) = 7e-74
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C +PMQVLREIV CTKAFPDAYVRLVA
Sbjct: 124 PMFGCRDPMQVLREIVACTKAFPDAYVRLVA 154
[2][TOP]
>UniRef100_P00873 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=2
Tax=Chlamydomonas reinhardtii RepID=RBS1_CHLRE
Length = 185
Score = 246 bits (628), Expect(2) = 4e-73
Identities = 121/126 (96%), Positives = 123/126 (97%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL
Sbjct: 4 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 63
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPL+DEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNESAIRFGSVSCLYYDNRYWTMWKL
Sbjct: 64 PPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 123
Query: 361 XMFVLR 378
MF R
Sbjct: 124 PMFGCR 129
Score = 52.8 bits (125), Expect(2) = 4e-73
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C +PMQVLREIV CTKAFPDAYVRLVA
Sbjct: 124 PMFGCRDPMQVLREIVACTKAFPDAYVRLVA 154
[3][TOP]
>UniRef100_Q84U90 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox
carteri RepID=Q84U90_VOLCA
Length = 185
Score = 234 bits (597), Expect(2) = 1e-69
Identities = 111/126 (88%), Positives = 119/126 (94%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
++AKSSV+A VARPARSSVRP+A LKPAVKAAPVAAPAQAN+MMVWTPVNNKMFETFSYL
Sbjct: 4 IVAKSSVAAVVARPARSSVRPVAGLKPAVKAAPVAAPAQANKMMVWTPVNNKMFETFSYL 63
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPL+DEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNES +RFG VSCLYYDNRYWTMWKL
Sbjct: 64 PPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRFGPVSCLYYDNRYWTMWKL 123
Query: 361 XMFVLR 378
MF R
Sbjct: 124 PMFGCR 129
Score = 52.8 bits (125), Expect(2) = 1e-69
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C +PMQVLREIV CTKAFPDAYVRLVA
Sbjct: 124 PMFGCRDPMQVLREIVACTKAFPDAYVRLVA 154
[4][TOP]
>UniRef100_Q84U92 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox
carteri RepID=Q84U92_VOLCA
Length = 185
Score = 231 bits (589), Expect(2) = 1e-68
Identities = 108/126 (85%), Positives = 118/126 (93%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
++AKSSV+ AV RPARSSVRP+A LKPA+KAAPVA+PAQAN+MMVWTPVNNKMFETFSYL
Sbjct: 4 IVAKSSVATAVVRPARSSVRPVAVLKPAIKAAPVASPAQANKMMVWTPVNNKMFETFSYL 63
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPL+DEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNES +RFG VSCLYYDNRYWTMWKL
Sbjct: 64 PPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRFGPVSCLYYDNRYWTMWKL 123
Query: 361 XMFVLR 378
MF R
Sbjct: 124 PMFGCR 129
Score = 52.8 bits (125), Expect(2) = 1e-68
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C +PMQVLREIV CTKAFPDAYVRLVA
Sbjct: 124 PMFGCRDPMQVLREIVACTKAFPDAYVRLVA 154
[5][TOP]
>UniRef100_Q84U91 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox
carteri RepID=Q84U91_VOLCA
Length = 185
Score = 228 bits (580), Expect(2) = 1e-67
Identities = 108/126 (85%), Positives = 115/126 (91%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
VIAKSSV+ AVARPARS VRP+A LKP+V+A PVA P QAN+MMVWTPVNNKMFETFSYL
Sbjct: 4 VIAKSSVATAVARPARSGVRPVAVLKPSVRATPVATPTQANKMMVWTPVNNKMFETFSYL 63
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLSDEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNES +RFG VSCLYYDNRYWTMWKL
Sbjct: 64 PPLSDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRFGPVSCLYYDNRYWTMWKL 123
Query: 361 XMFVLR 378
MF R
Sbjct: 124 PMFGCR 129
Score = 52.8 bits (125), Expect(2) = 1e-67
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C +PMQVLREIV CTKAFPDAYVRLVA
Sbjct: 124 PMFGCRDPMQVLREIVACTKAFPDAYVRLVA 154
[6][TOP]
>UniRef100_A8JGP8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas
reinhardtii RepID=A8JGP8_CHLRE
Length = 188
Score = 247 bits (631), Expect = 3e-64
Identities = 132/153 (86%), Positives = 134/153 (87%), Gaps = 2/153 (1%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL
Sbjct: 4 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 63
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL--YYDNRYWTMW 354
PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC D+
Sbjct: 64 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCRQPLLDHVEAAHV 123
Query: 355 KLXMFVLR*THAGAARDRRLHQGLPRCLRAPGG 453
+L HAGAARDRRLHQGLPRCLRAPGG
Sbjct: 124 RLPR-----PHAGAARDRRLHQGLPRCLRAPGG 151
[7][TOP]
>UniRef100_A8JGP5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas
reinhardtii RepID=A8JGP5_CHLRE
Length = 139
Score = 172 bits (435), Expect(2) = 6e-51
Identities = 80/83 (96%), Positives = 80/83 (96%)
Frame = +1
Query: 130 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 309
MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG
Sbjct: 1 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 60
Query: 310 SVSCLYYDNRYWTMWKLXMFVLR 378
SVSCLYYDNRYWTMWKL MF R
Sbjct: 61 SVSCLYYDNRYWTMWKLPMFGCR 83
Score = 52.8 bits (125), Expect(2) = 6e-51
Identities = 25/31 (80%), Positives = 26/31 (83%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C +PMQVLREIV CTKAFPDAYVRLVA
Sbjct: 78 PMFGCRDPMQVLREIVACTKAFPDAYVRLVA 108
[8][TOP]
>UniRef100_Q5VBK1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Dunaliella
tertiolecta RepID=Q5VBK1_DUNTE
Length = 189
Score = 177 bits (449), Expect(2) = 4e-48
Identities = 83/124 (66%), Positives = 104/124 (83%), Gaps = 1/124 (0%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPA-QANQMMVWTPVNNKMFETFSY 177
++AKS+ A +A+ +R++ + A+LKPAV+AAP A PA +ANQMMVW P+NNK FETFSY
Sbjct: 4 LLAKSASVAPMAKASRTATKVQASLKPAVRAAPKAQPAVRANQMMVWNPINNKQFETFSY 63
Query: 178 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 357
LPPL+ +QIA QVDYIV NGW PCLEFAE ++AYVS++SA+RFG+VS YYDNRYWTMWK
Sbjct: 64 LPPLTADQIAKQVDYIVNNGWTPCLEFAEQNQAYVSSDSAVRFGAVSANYYDNRYWTMWK 123
Query: 358 LXMF 369
L MF
Sbjct: 124 LPMF 127
Score = 38.1 bits (87), Expect(2) = 4e-48
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C +P QVL EI C++AFP++Y RLVA
Sbjct: 125 PMFGCTDPSQVLSEINKCSRAFPESYQRLVA 155
[9][TOP]
>UniRef100_Q5VBK0 Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit n=1
Tax=Dunaliella tertiolecta RepID=Q5VBK0_DUNTE
Length = 188
Score = 170 bits (430), Expect(2) = 7e-46
Identities = 86/125 (68%), Positives = 102/125 (81%), Gaps = 2/125 (1%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVA-APA-QANQMMVWTPVNNKMFETFS 174
+IAKS+ A VA +R+S + A+LKPAV+A P A APA +ANQMMVW P+NNK FETFS
Sbjct: 4 LIAKSASVAPVA--SRTSTKVQASLKPAVRAVPKAQAPAVRANQMMVWQPINNKQFETFS 61
Query: 175 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 354
YLPPL+ +QIA QVDYIV NGW PCLEFAE +AYVS++SA+RFG+VS YYDNRYWTMW
Sbjct: 62 YLPPLTADQIARQVDYIVENGWTPCLEFAEEGQAYVSSDSAVRFGAVSANYYDNRYWTMW 121
Query: 355 KLXMF 369
KL MF
Sbjct: 122 KLPMF 126
Score = 37.7 bits (86), Expect(2) = 7e-46
Identities = 17/31 (54%), Positives = 22/31 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C +P QVL EI C++AFP++Y RLVA
Sbjct: 124 PMFGCTDPSQVLSEINKCSRAFPNSYQRLVA 154
[10][TOP]
>UniRef100_C7FF11 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlorella
pyrenoidosa RepID=C7FF11_CHLPY
Length = 184
Score = 148 bits (374), Expect(2) = 2e-41
Identities = 75/122 (61%), Positives = 86/122 (70%)
Frame = +1
Query: 4 IAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLP 183
I+ S V A VA RS ++P AV + + + MMVWTPVNNK FETFSYLP
Sbjct: 5 ISASLVKAPVATTQRSVLKPAGKTFKAVTVSN-GNVQKTSAMMVWTPVNNKFFETFSYLP 63
Query: 184 PLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLX 363
PLS +QIA QVDYIV NGW PCLEFA+ D AYVSN+S +RFG+VS Y DNRYWTMWKL
Sbjct: 64 PLSGDQIARQVDYIVLNGWTPCLEFADPDCAYVSNDSCVRFGNVSVGYQDNRYWTMWKLP 123
Query: 364 MF 369
MF
Sbjct: 124 MF 125
Score = 44.7 bits (104), Expect(2) = 2e-41
Identities = 20/34 (58%), Positives = 25/34 (73%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKA 463
P C +P QVL+EI +C +AFPDAY+RLVA A
Sbjct: 123 PMFGCTDPSQVLKEISNCERAFPDAYIRLVAFDA 156
[11][TOP]
>UniRef100_P16133 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1
Tax=Acetabularia peniculus RepID=RBS5_ACECL
Length = 184
Score = 141 bits (356), Expect(2) = 3e-38
Identities = 69/109 (63%), Positives = 79/109 (72%)
Frame = +1
Query: 43 ARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDY 222
ARSS P A A+ VA ++ +MMVW P NNKMFETFSYLPPL+DEQI+ QVDY
Sbjct: 18 ARSSSIPKVATNKMGFASAVAMK-KSREMMVWQPFNNKMFETFSYLPPLTDEQISKQVDY 76
Query: 223 IVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
I+AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTMWKL MF
Sbjct: 77 ILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMF 125
Score = 40.8 bits (94), Expect(2) = 3e-38
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKA 463
P C + QVL EI CTKAFPDAY+RLV A
Sbjct: 123 PMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDA 156
[12][TOP]
>UniRef100_P16131 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1
Tax=Acetabularia peniculus RepID=RBS3_ACECL
Length = 183
Score = 139 bits (350), Expect(2) = 1e-37
Identities = 63/89 (70%), Positives = 69/89 (77%)
Frame = +1
Query: 103 AAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYV 282
AA + MMVW P NNKMFETFSYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY
Sbjct: 36 AAVQKCRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYA 95
Query: 283 SNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
NE+ IR G VS Y DNRYWTMWKL MF
Sbjct: 96 GNENCIRMGPVSSTYQDNRYWTMWKLPMF 124
Score = 40.8 bits (94), Expect(2) = 1e-37
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKA 463
P C + QVL EI CTKAFPDAY+RLV A
Sbjct: 122 PMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDA 155
[13][TOP]
>UniRef100_P16132 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1
Tax=Acetabularia peniculus RepID=RBS4_ACECL
Length = 182
Score = 137 bits (345), Expect(2) = 5e-37
Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
Frame = +1
Query: 43 ARSSVRPMAALKPAV--KAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQV 216
++ +P A K ++ K A + +MMVW P NNKMFETFSYLPPL+DEQI+ QV
Sbjct: 13 SKGCTKPSAVPKVSINRKGFLNTAMNKKREMMVWQPFNNKMFETFSYLPPLTDEQISKQV 72
Query: 217 DYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
DYI+AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTMWKL MF
Sbjct: 73 DYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMF 123
Score = 40.8 bits (94), Expect(2) = 5e-37
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKA 463
P C + QVL EI CTKAFPDAY+RLV A
Sbjct: 121 PMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDA 154
[14][TOP]
>UniRef100_Q30CC3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Haematococcus
pluvialis RepID=Q30CC3_HAEPL
Length = 141
Score = 142 bits (358), Expect(2) = 9e-37
Identities = 60/81 (74%), Positives = 70/81 (86%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
MMVW P+NNK +ETFSYLPPL+ +QIA QVDY+V NGWIPCLEFA++ +AYVSN S +RF
Sbjct: 1 MMVWQPINNKQYETFSYLPPLTSDQIARQVDYVVGNGWIPCLEFADASQAYVSNASTVRF 60
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
GSVS YYDNRYWT+WKL MF
Sbjct: 61 GSVSACYYDNRYWTLWKLPMF 81
Score = 35.0 bits (79), Expect(2) = 9e-37
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C +P VL EI +KAFP AY+R+VA
Sbjct: 79 PMFGCTDPSAVLTEISRASKAFPQAYIRMVA 109
[15][TOP]
>UniRef100_Q38692 Ribulose bisphosphate carboxylase small chain 6, chloroplastic n=1
Tax=Acetabularia peniculus RepID=RBS6_ACECL
Length = 182
Score = 136 bits (342), Expect(2) = 1e-36
Identities = 64/106 (60%), Positives = 77/106 (72%), Gaps = 2/106 (1%)
Frame = +1
Query: 58 RPMAALKPAVKAAPV--AAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVA 231
+P+A K ++ V +A + +MMVW P NNKMFETFSYLPPL+DEQI+ QVDYI+A
Sbjct: 18 KPIAPPKVSINKGFVNTSAAIKNREMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILA 77
Query: 232 NGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
N W PCLEFA SD+AY NE+ I G V+ Y DNRYWTMWKL MF
Sbjct: 78 NAWTPCLEFAASDQAYAGNENCITMGPVASTYQDNRYWTMWKLPMF 123
Score = 40.8 bits (94), Expect(2) = 1e-36
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKA 463
P C + QVL EI CTKAFPDAY+RLV A
Sbjct: 121 PMFGCTDGSQVLTEIQACTKAFPDAYIRLVCFDA 154
[16][TOP]
>UniRef100_Q5XR40 Ribulose bisphosphate carboxylase small chain n=1 Tax=Dunaliella
salina RepID=Q5XR40_DUNSA
Length = 190
Score = 154 bits (390), Expect = 2e-36
Identities = 81/118 (68%), Positives = 91/118 (77%), Gaps = 4/118 (3%)
Frame = +1
Query: 28 AVARP-ARSSVRPMAALKPAV-KAAPVA-APA-QANQMMVWTPVNNKMFETFSYLPPLSD 195
AVA P +R S + A+LKPAV + AP A APA + NQMMVW PVNNK FETFSYLPPL+
Sbjct: 11 AVATPISRGSTKVQASLKPAVTRPAPKAQAPAVRTNQMMVWRPVNNKQFETFSYLPPLTA 70
Query: 196 EQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
+QIA QVDYIV NGWIPCLEF+E AYV+N + RFG VS YYDNRYWTMWKL MF
Sbjct: 71 DQIARQVDYIVGNGWIPCLEFSEESYAYVANTNTARFGPVSNNYYDNRYWTMWKLPMF 128
[17][TOP]
>UniRef100_P16134 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=2
Tax=Acetabularia acetabulum RepID=RBS1_ACEAT
Length = 182
Score = 134 bits (337), Expect(2) = 4e-36
Identities = 62/111 (55%), Positives = 76/111 (68%), Gaps = 2/111 (1%)
Frame = +1
Query: 43 ARSSVRPMAALKPAVKAAPVAAP--AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQV 216
++ +P+A K + A + +MMVW P NNKMFETFS+LPPL+DEQI+ QV
Sbjct: 13 SKECAKPLATPKVTLNKRGFATTIATKNREMMVWQPFNNKMFETFSFLPPLTDEQISKQV 72
Query: 217 DYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
DYI+ N W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTMWKL MF
Sbjct: 73 DYILTNSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMF 123
Score = 40.8 bits (94), Expect(2) = 4e-36
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKA 463
P C + QVL EI CTKAFPDAY+RLV A
Sbjct: 121 PMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDA 154
[18][TOP]
>UniRef100_P16138 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1
Tax=Acetabularia acetabulum RepID=RBS5_ACEAT
Length = 183
Score = 135 bits (341), Expect(2) = 6e-36
Identities = 64/107 (59%), Positives = 75/107 (70%), Gaps = 3/107 (2%)
Frame = +1
Query: 58 RPMAALKPAVKAAPVAAPAQANQ---MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIV 228
+P A K + A + N+ MMVW P NNKMFETFS+LPPL+DEQI+ QVDYI+
Sbjct: 18 KPAAVPKVVMSKGGFARTSAVNKNRDMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYIL 77
Query: 229 ANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTMWKL MF
Sbjct: 78 ANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMF 124
Score = 38.9 bits (89), Expect(2) = 6e-36
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKA 463
P C + QVL EI CT AFPDAY+RLV A
Sbjct: 122 PMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDA 155
[19][TOP]
>UniRef100_P17537 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Chlamydomonas moewusii RepID=RBS_CHLMO
Length = 168
Score = 135 bits (341), Expect(2) = 6e-36
Identities = 67/113 (59%), Positives = 82/113 (72%)
Frame = +1
Query: 31 VARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAA 210
+A A SV AA + +AAPVAAPA A + VW PVNNK +ETFSYLPPL++++I
Sbjct: 1 MASIAAKSVSLRAATR---RAAPVAAPADA-RFKVWQPVNNKQYETFSYLPPLTNQKIGR 56
Query: 211 QVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
QVDYI+ NGW PCLEFA+ ++VSN +A+R VS YYDNRYWTMWKL MF
Sbjct: 57 QVDYIINNGWTPCLEFADPSTSFVSNANAVRLQGVSAGYYDNRYWTMWKLPMF 109
Score = 38.9 bits (89), Expect(2) = 6e-36
Identities = 17/31 (54%), Positives = 21/31 (67%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C +P QVLRE+ C AFP+ Y+RLVA
Sbjct: 107 PMFGCTDPSQVLREVSACQVAFPNVYIRLVA 137
[20][TOP]
>UniRef100_Q9XFT5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas
sp. HS-5 RepID=Q9XFT5_9CHLO
Length = 158
Score = 134 bits (337), Expect(2) = 6e-36
Identities = 61/94 (64%), Positives = 74/94 (78%)
Frame = +1
Query: 88 KAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAES 267
KA PVAAP +A+ VW PVNNK +ETFSYLP L+ EQIA QVDY++ NG+ PCLEFA++
Sbjct: 13 KATPVAAP-RASAFKVWQPVNNKQYETFSYLPALTSEQIARQVDYVIRNGYTPCLEFADA 71
Query: 268 DKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
++VSNE+ +RF VS YYDNRYWTMWKL MF
Sbjct: 72 AYSFVSNENTVRFSGVSANYYDNRYWTMWKLPMF 105
Score = 40.4 bits (93), Expect(2) = 6e-36
Identities = 18/31 (58%), Positives = 23/31 (74%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C + QVL+E+ CT+AFP+AYVRLVA
Sbjct: 103 PMFGCTDAAQVLKEVALCTRAFPNAYVRLVA 133
[21][TOP]
>UniRef100_Q38693 Ribulose bisphosphate carboxylase small chain 7, chloroplastic n=1
Tax=Acetabularia peniculus RepID=RBS7_ACECL
Length = 183
Score = 135 bits (341), Expect(2) = 7e-36
Identities = 60/81 (74%), Positives = 66/81 (81%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
MMVW P NNKMFETFSYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY NE+ IR
Sbjct: 44 MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRM 103
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G V+ Y DNRYWTMWKL MF
Sbjct: 104 GPVASTYQDNRYWTMWKLPMF 124
Score = 38.5 bits (88), Expect(2) = 7e-36
Identities = 18/34 (52%), Positives = 22/34 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKA 463
P C + QVL ++ CTKAFPDAY+RLV A
Sbjct: 122 PMFGCTDGSQVLSDMQACTKAFPDAYIRLVCFDA 155
[22][TOP]
>UniRef100_P16136 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1
Tax=Acetabularia acetabulum RepID=RBS3_ACEAT
Length = 182
Score = 133 bits (334), Expect(2) = 7e-36
Identities = 62/111 (55%), Positives = 75/111 (67%), Gaps = 2/111 (1%)
Frame = +1
Query: 43 ARSSVRPMAALKPAVKAAPVAAPAQANQ--MMVWTPVNNKMFETFSYLPPLSDEQIAAQV 216
++ +P+A+ K + A MMVW P NNKMFETFS+LPPL+DEQI+ QV
Sbjct: 13 SKECAKPLASPKVTLNKRGFATTIATKNRGMMVWQPFNNKMFETFSFLPPLTDEQISKQV 72
Query: 217 DYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
DYI+ N W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTMWKL MF
Sbjct: 73 DYILINSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMF 123
Score = 41.2 bits (95), Expect(2) = 7e-36
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKA 463
P C + QVL EI CTKAFPDAY+RLV A
Sbjct: 121 PMFGCTDASQVLSEIQACTKAFPDAYIRLVCFDA 154
[23][TOP]
>UniRef100_P16137 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1
Tax=Acetabularia acetabulum RepID=RBS4_ACEAT
Length = 182
Score = 135 bits (339), Expect(2) = 1e-35
Identities = 59/82 (71%), Positives = 67/82 (81%)
Frame = +1
Query: 124 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 303
+MMVW P NNKMFETFS+LPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY NE+ IR
Sbjct: 42 EMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIR 101
Query: 304 FGSVSCLYYDNRYWTMWKLXMF 369
G V+ Y DNRYWTMWKL MF
Sbjct: 102 MGPVASTYQDNRYWTMWKLPMF 123
Score = 38.9 bits (89), Expect(2) = 1e-35
Identities = 19/34 (55%), Positives = 21/34 (61%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKA 463
P C + QVL EI CT AFPDAY+RLV A
Sbjct: 121 PMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDA 154
[24][TOP]
>UniRef100_C4P6Y2 Ribulose bisphosphate carboxylase small chain n=1
Tax=Ankistrodesmus convolutus RepID=C4P6Y2_9CHLO
Length = 165
Score = 132 bits (331), Expect(2) = 2e-35
Identities = 64/107 (59%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
Frame = +1
Query: 52 SVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVA 231
++R A + A KA A PA+ MVW PVNNK FETFSYLPPL+DEQIA QVDYIV
Sbjct: 2 ALRLTAGSRVAAKAPVAAKPAK---FMVWQPVNNKFFETFSYLPPLNDEQIARQVDYIVN 58
Query: 232 NGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLXMF 369
NGW PCLEF++S AY+SN + +R + YYDNRYWT+WKL MF
Sbjct: 59 NGWTPCLEFSDSQTAYMSNTNVVRIQNGATANYYDNRYWTLWKLPMF 105
Score = 40.8 bits (94), Expect(2) = 2e-35
Identities = 19/34 (55%), Positives = 22/34 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKA 463
P C +P QVL+EI C KA PDAYVR+ A A
Sbjct: 103 PMFGCTDPSQVLKEIAACVKACPDAYVRMAAFDA 136
[25][TOP]
>UniRef100_C7FF10 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlorella
pyrenoidosa RepID=C7FF10_CHLPY
Length = 181
Score = 149 bits (376), Expect = 1e-34
Identities = 75/147 (51%), Positives = 93/147 (63%), Gaps = 5/147 (3%)
Frame = +1
Query: 19 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQAN-----QMMVWTPVNNKMFETFSYLP 183
++ +A A +VRP+A LK A + + + M VWTP+NNKMFETFSYLP
Sbjct: 1 MACTMAAIAPVAVRPVAGLKQAKNTSAARTVSNGSIQKTTAMQVWTPINNKMFETFSYLP 60
Query: 184 PLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLX 363
PL+D +I+ QVDYIV NGW PCLEFAES AY SNE+ IR + +CLYYDNRYWTMWKL
Sbjct: 61 PLTDAEISRQVDYIVNNGWTPCLEFAESASAYASNENCIRMNNTTCLYYDNRYWTMWKLP 120
Query: 364 MFVLR*THAGAARDRRLHQGLPRCLRA 444
MF G ++ Q + C RA
Sbjct: 121 MF-------GCTDGHQVLQEVANCRRA 140
[26][TOP]
>UniRef100_B3VSA1 Ribulose bisphosphate carboxylase small chain n=1
Tax=Parietochloris incisa RepID=B3VSA1_9CHLO
Length = 189
Score = 131 bits (329), Expect(2) = 1e-34
Identities = 66/119 (55%), Positives = 87/119 (73%), Gaps = 5/119 (4%)
Frame = +1
Query: 28 AVARPARSSVRPMAALKPAVKAAPVAAPAQAN-----QMMVWTPVNNKMFETFSYLPPLS 192
A A PARS + AL PA +AA A +N QMMVW P NN+ FET S+LPPL+
Sbjct: 17 ASAAPARS----LKALAPA-RAATFAQKTVSNGIKTRQMMVWQPTNNRYFETLSFLPPLT 71
Query: 193 DEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
D+QIA QVDY++ NGW+PCLEF+E++ AYV++++ IR+G+V+ Y DNRYWTM+KL MF
Sbjct: 72 DDQIAKQVDYMINNGWVPCLEFSEANMAYVASDNCIRYGNVASGYQDNRYWTMFKLPMF 130
Score = 39.3 bits (90), Expect(2) = 1e-34
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C +P QVL EI + K FPDAY+RLVA
Sbjct: 128 PMFGCTDPGQVLTEIANAEKCFPDAYIRLVA 158
[27][TOP]
>UniRef100_P26985 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Batophora oerstedii RepID=RBS_BATOE
Length = 175
Score = 127 bits (320), Expect(2) = 7e-34
Identities = 54/86 (62%), Positives = 67/86 (77%)
Frame = +1
Query: 112 AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNE 291
+++ MMVW P NNK FETFSYLPPL+D+QI QVDYI+ N W PCLEFA SD+AYV+++
Sbjct: 31 SKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFAGSDQAYVTHD 90
Query: 292 SAIRFGSVSCLYYDNRYWTMWKLXMF 369
+ +R G + Y DNRYWTMWKL MF
Sbjct: 91 NTVRMGDCASTYQDNRYWTMWKLPMF 116
Score = 40.0 bits (92), Expect(2) = 7e-34
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKA 463
P C + QVL EI CTKAFPDAY+RLV A
Sbjct: 114 PMFGCIDGSQVLTEISACTKAFPDAYIRLVCFDA 147
[28][TOP]
>UniRef100_Q68BL0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris
bacillaris RepID=Q68BL0_NANBA
Length = 182
Score = 122 bits (306), Expect(2) = 9e-33
Identities = 56/118 (47%), Positives = 73/118 (61%)
Frame = +1
Query: 16 SVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSD 195
++S A R A + A+ K + M+VWTP+NNK FETFS+LPPLSD
Sbjct: 6 AISTAAVRIAPITKVNAASTKARTAFVSNGTVKKTTAMLVWTPINNKFFETFSFLPPLSD 65
Query: 196 EQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
+I QVDYIV NGW PCLEF++ + AY+ + + +R S Y DNRYW+MWKL MF
Sbjct: 66 SEITKQVDYIVRNGWTPCLEFSDPEGAYIGDTNTVRLQGTSAGYQDNRYWSMWKLPMF 123
Score = 41.6 bits (96), Expect(2) = 9e-33
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C + QVL+EI CTKAFP AY+RLVA
Sbjct: 121 PMFGCTDGSQVLKEIAGCTKAFPGAYIRLVA 151
[29][TOP]
>UniRef100_P16881 Ribulose bisphosphate carboxylase small chain P8, chloroplastic n=1
Tax=Euglena gracilis RepID=RBS_EUGGR
Length = 1273
Score = 125 bits (315), Expect(2) = 3e-32
Identities = 59/102 (57%), Positives = 70/102 (68%)
Frame = +1
Query: 64 MAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWI 243
MA +KP K A V M VW PVNNK FETFSYLPPLSD QIA QVD I+A G
Sbjct: 116 MAMMKP--KVAAVLPFTSEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLS 173
Query: 244 PCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
PCLEFA + ++++N++ +RF + YYDNRYWTMWKL MF
Sbjct: 174 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMF 215
Score = 36.6 bits (83), Expect(2) = 3e-32
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C + QVLREI +C +A+P YVRL A
Sbjct: 213 PMFGCTDASQVLREISECRRAYPQCYVRLAA 243
Score = 123 bits (308), Expect(2) = 2e-31
Identities = 60/117 (51%), Positives = 74/117 (63%)
Frame = +1
Query: 19 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 198
+S V RP+ SS +AA +M VW PVNNK FETFSYLPPLSD
Sbjct: 1115 ISFVVQRPSGSSSSSWG----------MAAMTGEKEMKVWNPVNNKKFETFSYLPPLSDA 1164
Query: 199 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKL MF
Sbjct: 1165 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMF 1221
Score = 36.6 bits (83), Expect(2) = 2e-31
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C + QVLREI +C +A+P YVRL A
Sbjct: 1219 PMFGCTDASQVLREISECRRAYPQCYVRLAA 1249
Score = 122 bits (306), Expect(2) = 3e-31
Identities = 60/117 (51%), Positives = 73/117 (62%)
Frame = +1
Query: 19 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 198
+S V RP+ SS +AA M VW PVNNK FETFSYLPPLSD
Sbjct: 253 ISFVVQRPSGSSSSSWG----------MAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 302
Query: 199 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKL MF
Sbjct: 303 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMF 359
Score = 122 bits (306), Expect(2) = 3e-31
Identities = 60/117 (51%), Positives = 73/117 (62%)
Frame = +1
Query: 19 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 198
+S V RP+ SS +AA M VW PVNNK FETFSYLPPLSD
Sbjct: 540 ISFVVQRPSGSSSSSWG----------MAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 589
Query: 199 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKL MF
Sbjct: 590 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMF 646
Score = 122 bits (306), Expect(2) = 3e-31
Identities = 60/117 (51%), Positives = 74/117 (63%)
Frame = +1
Query: 19 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 198
+S V RP+ SS + +AA M VW PVNNK FETFSYLPPLSD
Sbjct: 684 ISFVVQRPSGSS-----------SSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 732
Query: 199 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKL MF
Sbjct: 733 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMF 789
Score = 122 bits (306), Expect(2) = 3e-31
Identities = 60/117 (51%), Positives = 73/117 (62%)
Frame = +1
Query: 19 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 198
+S V RP+ SS +AA M VW PVNNK FETFSYLPPLSD
Sbjct: 971 ISFVVQRPSGSSSSSWG----------MAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 1020
Query: 199 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKL MF
Sbjct: 1021 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMF 1077
Score = 36.6 bits (83), Expect(2) = 3e-31
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C + QVLREI +C +A+P YVRL A
Sbjct: 357 PMFGCTDASQVLREISECRRAYPQCYVRLAA 387
Score = 36.6 bits (83), Expect(2) = 3e-31
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C + QVLREI +C +A+P YVRL A
Sbjct: 644 PMFGCTDASQVLREISECRRAYPQCYVRLAA 674
Score = 36.6 bits (83), Expect(2) = 3e-31
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C + QVLREI +C +A+P YVRL A
Sbjct: 787 PMFGCTDASQVLREISECRRAYPQCYVRLAA 817
Score = 36.6 bits (83), Expect(2) = 3e-31
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C + QVLREI +C +A+P YVRL A
Sbjct: 1075 PMFGCTDASQVLREISECRRAYPQCYVRLAA 1105
Score = 123 bits (309), Expect(2) = 4e-31
Identities = 60/117 (51%), Positives = 76/117 (64%)
Frame = +1
Query: 19 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 198
+S V RP+ SS + + +AA +M VW PVNNK FETFSYLPPLSD
Sbjct: 827 ISFVVQRPSGSS---------SSSSWGMAAMTGEKEMKVWNPVNNKKFETFSYLPPLSDA 877
Query: 199 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKL MF
Sbjct: 878 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMF 934
Score = 35.0 bits (79), Expect(2) = 4e-31
Identities = 15/29 (51%), Positives = 19/29 (65%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRL 448
P C + QVLREI +C +A+P YVRL
Sbjct: 932 PMFGCTDASQVLREISECRRAYPQCYVRL 960
Score = 120 bits (301), Expect(2) = 1e-30
Identities = 59/117 (50%), Positives = 73/117 (62%)
Frame = +1
Query: 19 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 198
+S V RP+ SS + +AA M VW PVNNK FETFSYLPPLSD
Sbjct: 397 ISFVVQRPSGSS-----------SSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 445
Query: 199 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDN YWTMWKL MF
Sbjct: 446 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNHYWTMWKLPMF 502
Score = 36.6 bits (83), Expect(2) = 1e-30
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C + QVLREI +C +A+P YVRL A
Sbjct: 500 PMFGCTDASQVLREISECRRAYPQCYVRLAA 530
[30][TOP]
>UniRef100_Q9STC5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Euglena gracilis RepID=Q9STC5_EUGGR
Length = 271
Score = 125 bits (315), Expect(2) = 3e-32
Identities = 59/102 (57%), Positives = 70/102 (68%)
Frame = +1
Query: 64 MAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWI 243
MA +KP K A V M VW PVNNK FETFSYLPPLSD QIA QVD I+A G
Sbjct: 116 MAMMKP--KVAAVLPFTSEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLS 173
Query: 244 PCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
PCLEFA + ++++N++ +RF + YYDNRYWTMWKL MF
Sbjct: 174 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMF 215
Score = 36.6 bits (83), Expect(2) = 3e-32
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C + QVLREI +C +A+P YVRL A
Sbjct: 213 PMFGCTDASQVLREISECRRAYPQCYVRLAA 243
[31][TOP]
>UniRef100_Q68BK9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris
bacillaris RepID=Q68BK9_NANBA
Length = 182
Score = 120 bits (302), Expect(2) = 3e-32
Identities = 50/81 (61%), Positives = 62/81 (76%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M+VWTP+NNK FETFS+LPPLSD +I QVDYIV NGW PCLEF++ + AY+ + + +R
Sbjct: 43 MLVWTPINNKFFETFSFLPPLSDSEITKQVDYIVRNGWTPCLEFSDPEGAYIGDTNTVRL 102
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
S Y DNRYW+MWKL MF
Sbjct: 103 QGTSAGYQDNRYWSMWKLPMF 123
Score = 41.6 bits (96), Expect(2) = 3e-32
Identities = 19/31 (61%), Positives = 22/31 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C + QVL+EI CTKAFP AY+RLVA
Sbjct: 121 PMFGCTDGSQVLKEIAGCTKAFPGAYIRLVA 151
[32][TOP]
>UniRef100_Q68BK3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris
bacillaris RepID=Q68BK3_NANBA
Length = 180
Score = 118 bits (296), Expect(2) = 6e-32
Identities = 59/114 (51%), Positives = 73/114 (64%)
Frame = +1
Query: 28 AVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIA 207
A+ RP + V+ A K V A + + MVWTPVNNK FETFS+LPPLS+ +I+
Sbjct: 10 ALVRP--TGVKTTVASKKNVFAVSNSTIKNTSAFMVWTPVNNKFFETFSFLPPLSESEIS 67
Query: 208 AQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
QVDY+V N + PCLEF+E + AYV + S IR S Y DNRYW MWKL MF
Sbjct: 68 KQVDYMVRNAFTPCLEFSEPENAYVGDASTIRLCGTSSGYQDNRYWPMWKLPMF 121
Score = 42.7 bits (99), Expect(2) = 6e-32
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +2
Query: 347 PCGSXPCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKA 463
P P C + QVL+EI CTKAFP AY+RLVA A
Sbjct: 114 PMWKLPMFGCTDGSQVLKEIAACTKAFPGAYIRLVAFDA 152
[33][TOP]
>UniRef100_Q9ZRA1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Chloromonas sp. ANT3 RepID=Q9ZRA1_9CHLO
Length = 140
Score = 125 bits (313), Expect(2) = 1e-31
Identities = 53/79 (67%), Positives = 62/79 (78%)
Frame = +1
Query: 133 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 312
VW PVNNK +ETFSYLP L+ EQIA QVDY++ NGW PCLEFA+ ++VSNE+ +RF
Sbjct: 3 VWQPVNNKQYETFSYLPALTTEQIAKQVDYVIRNGWTPCLEFADPSSSFVSNENTVRFRG 62
Query: 313 VSCLYYDNRYWTMWKLXMF 369
S YYDNRYWTMWKL MF
Sbjct: 63 ASSNYYDNRYWTMWKLPMF 81
Score = 35.4 bits (80), Expect(2) = 1e-31
Identities = 16/31 (51%), Positives = 20/31 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C + QVL+EI C AFP++Y RLVA
Sbjct: 79 PMFGCTDASQVLKEIAACNAAFPESYSRLVA 109
[34][TOP]
>UniRef100_A7Y7F5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Chlorella pyrenoidosa RepID=A7Y7F5_CHLPY
Length = 82
Score = 135 bits (340), Expect = 1e-30
Identities = 61/79 (77%), Positives = 66/79 (83%)
Frame = +1
Query: 133 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 312
VW PVNNK FETFSYLPPLS +QIA QVDYIV NGW PCLEFA+ D AYVSN+S +RFG+
Sbjct: 1 VWKPVNNKFFETFSYLPPLSGDQIARQVDYIVLNGWTPCLEFADPDCAYVSNDSCVRFGN 60
Query: 313 VSCLYYDNRYWTMWKLXMF 369
VS Y DNRYWTMWKL MF
Sbjct: 61 VSVGYQDNRYWTMWKLPMF 79
[35][TOP]
>UniRef100_P16129 Ribulose bisphosphate carboxylase small chain 1 (Fragment) n=1
Tax=Acetabularia peniculus RepID=RBS1_ACECL
Length = 126
Score = 108 bits (270), Expect(2) = 2e-28
Identities = 47/67 (70%), Positives = 54/67 (80%)
Frame = +1
Query: 169 FSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWT 348
FSYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY N++ IR G V+ Y DNRYWT
Sbjct: 1 FSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNDNCIRMGPVASTYQDNRYWT 60
Query: 349 MWKLXMF 369
MWKL MF
Sbjct: 61 MWKLPMF 67
Score = 40.8 bits (94), Expect(2) = 2e-28
Identities = 20/34 (58%), Positives = 22/34 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKA 463
P C + QVL EI CTKAFPDAY+RLV A
Sbjct: 65 PMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDA 98
[36][TOP]
>UniRef100_Q33BU5 RuBisCO small subunits (Fragment) n=1 Tax=Chlorella pyrenoidosa
RepID=Q33BU5_CHLPY
Length = 124
Score = 110 bits (274), Expect(2) = 8e-28
Identities = 47/65 (72%), Positives = 53/65 (81%)
Frame = +1
Query: 175 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 354
YLPPL+D +I+ QVDYIV NGW PCLEFAES AY SNE+ IR + +CLYYDNRYWTMW
Sbjct: 1 YLPPLTDAEISRQVDYIVNNGWTPCLEFAESTSAYASNENCIRMNNTTCLYYDNRYWTMW 60
Query: 355 KLXMF 369
KL MF
Sbjct: 61 KLPMF 65
Score = 37.4 bits (85), Expect(2) = 8e-28
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ +C +AFPDAY+RLV
Sbjct: 63 PMFGCTDGHQVLAEVSNCRRAFPDAYIRLV 92
[37][TOP]
>UniRef100_Q7M229 Ribulose bisphosphate carboxylase small chain n=1 Tax=Euglena
gracilis RepID=Q7M229_EUGGR
Length = 138
Score = 117 bits (293), Expect(2) = 4e-26
Identities = 54/88 (61%), Positives = 66/88 (75%), Gaps = 7/88 (7%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFA---ESDKA----YVS 285
M VW PVNNK +ETFSYLPPLSD +IA QVD I+A GWIPCLEF+ S++A Y++
Sbjct: 1 MKVWNPVNNKFWETFSYLPPLSDREIAKQVDMIIAKGWIPCLEFSLREISERAYPCCYIA 60
Query: 286 NESAIRFGSVSCLYYDNRYWTMWKLXMF 369
N++ +RF + YYDNRYWTMWKL MF
Sbjct: 61 NDNTVRFSCTAAGYYDNRYWTMWKLPMF 88
Score = 24.3 bits (51), Expect(2) = 4e-26
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C + QVL+E+ A P+ +VRL A
Sbjct: 86 PMFGCTDASQVLKELSPLEFAAPENFVRLAA 116
[38][TOP]
>UniRef100_C1E330 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas
sp. RCC299 RepID=C1E330_9CHLO
Length = 179
Score = 118 bits (295), Expect = 2e-25
Identities = 59/137 (43%), Positives = 77/137 (56%), Gaps = 4/137 (2%)
Frame = +1
Query: 64 MAALKPAVKAAPVAAPAQA---NQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVAN 234
++A+ P + APV + +A N MMVW P NK FETFS+LPPLSD+++A QV Y++ N
Sbjct: 4 ISAVAPVLNKAPVVSTGKAANTNSMMVWQPHGNKFFETFSFLPPLSDQEVARQVQYLLNN 63
Query: 235 GWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLXMFVLR*THAGAARDRR 411
GW PC+EF + KAY SV+ YYDNRYW MWKL M+ R
Sbjct: 64 GWTPCIEFESAAKAYADTHGWSGLDSSVTAGYYDNRYWVMWKLPMYGCTNPDEVLQEIRA 123
Query: 412 LHQGLPRCLRAPGGFES 462
Q P C GF++
Sbjct: 124 CTQAFPECFIRVAGFDN 140
[39][TOP]
>UniRef100_C1N9I5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas
pusilla CCMP1545 RepID=C1N9I5_9CHLO
Length = 186
Score = 117 bits (294), Expect = 3e-25
Identities = 61/141 (43%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
Frame = +1
Query: 43 ARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDY 222
A SV P+ A PAV + +++ M VW P NNK FETFS+LPPLSD++IA QV Y
Sbjct: 3 ALCSVAPVVAKVPAVSTGKAS---KSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQVQY 59
Query: 223 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLXMFVLR*THAGAA 399
++ NGW PC+EF + KAY SV+ YYDNRYW MWKL M+ A
Sbjct: 60 LINNGWAPCIEFEGAGKAYCDTHGWSGLDSSVNAGYYDNRYWVMWKLPMYGCTSPDEVLA 119
Query: 400 RDRRLHQGLPRCLRAPGGFES 462
R + P C GF++
Sbjct: 120 EVRACTRAFPDCFIRVAGFDN 140
[40][TOP]
>UniRef100_C1N9I4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas
pusilla CCMP1545 RepID=C1N9I4_9CHLO
Length = 183
Score = 117 bits (294), Expect = 3e-25
Identities = 61/141 (43%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
Frame = +1
Query: 43 ARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDY 222
A SV P+ A PAV + +++ M VW P NNK FETFS+LPPLSD++IA QV Y
Sbjct: 3 ALCSVAPVVAKVPAVSTGKAS---KSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQVQY 59
Query: 223 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLXMFVLR*THAGAA 399
++ NGW PC+EF + KAY SV+ YYDNRYW MWKL M+ A
Sbjct: 60 LINNGWAPCIEFEGAGKAYCDTHGWSGLDSSVNAGYYDNRYWVMWKLPMYGCTSPDEVLA 119
Query: 400 RDRRLHQGLPRCLRAPGGFES 462
R + P C GF++
Sbjct: 120 EVRACTRAFPDCFIRVAGFDN 140
[41][TOP]
>UniRef100_C1N9I3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas
pusilla CCMP1545 RepID=C1N9I3_9CHLO
Length = 204
Score = 117 bits (294), Expect = 3e-25
Identities = 61/141 (43%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
Frame = +1
Query: 43 ARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDY 222
A SV P+ A PAV + +++ M VW P NNK FETFS+LPPLSD++IA QV Y
Sbjct: 3 ALCSVAPVVAKVPAVSTGKAS---KSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQVQY 59
Query: 223 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLXMFVLR*THAGAA 399
++ NGW PC+EF + KAY SV+ YYDNRYW MWKL M+ A
Sbjct: 60 LINNGWAPCIEFEGAGKAYCDTHGWSGLDSSVNAGYYDNRYWVMWKLPMYGCTSPDEVLA 119
Query: 400 RDRRLHQGLPRCLRAPGGFES 462
R + P C GF++
Sbjct: 120 EVRACTRAFPDCFIRVAGFDN 140
[42][TOP]
>UniRef100_Q8S322 Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
(Fragment) n=1 Tax=Acetabularia acetabulum
RepID=Q8S322_ACEAT
Length = 126
Score = 99.8 bits (247), Expect(2) = 1e-24
Identities = 43/67 (64%), Positives = 52/67 (77%)
Frame = +1
Query: 169 FSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWT 348
+S+LPPL+DEQI+ QVDYI+AN W CLEFA SD+AY N++ IR V+ Y DNRYWT
Sbjct: 1 YSFLPPLTDEQISKQVDYILANSWTACLEFAASDQAYAGNDNCIRMRPVASTYQDNRYWT 60
Query: 349 MWKLXMF 369
MWKL MF
Sbjct: 61 MWKLPMF 67
Score = 37.4 bits (85), Expect(2) = 1e-24
Identities = 18/34 (52%), Positives = 20/34 (58%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKA 463
P C + QVL EI CT AFPDAY+R V A
Sbjct: 65 PMFGCTDGSQVLSEIQACTNAFPDAYIRFVCFDA 98
[43][TOP]
>UniRef100_C1E329 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas
sp. RCC299 RepID=C1E329_9CHLO
Length = 191
Score = 115 bits (289), Expect = 1e-24
Identities = 58/137 (42%), Positives = 76/137 (55%), Gaps = 4/137 (2%)
Frame = +1
Query: 64 MAALKPAVKAAPVAAPAQA---NQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVAN 234
++A+ P + APV + +A N MMVW P NK FETFS+LPPLSD+++A QV Y++ N
Sbjct: 4 ISAVAPVLNKAPVVSTGKAANTNSMMVWQPHGNKFFETFSFLPPLSDQEVARQVQYLLNN 63
Query: 235 GWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLXMFVLR*THAGAARDRR 411
GW PC+EF + KAY SV+ YYDNRYW MWKL M+ R
Sbjct: 64 GWTPCIEFESAAKAYADTHGWSGLDSSVTAGYYDNRYWVMWKLPMYGCTNPEEVLQEIRA 123
Query: 412 LHQGLPRCLRAPGGFES 462
P C GF++
Sbjct: 124 CTSAFPDCFIRVAGFDN 140
[44][TOP]
>UniRef100_B6RHQ3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Miscanthus x
giganteus RepID=B6RHQ3_9POAL
Length = 169
Score = 107 bits (266), Expect(2) = 2e-24
Identities = 53/123 (43%), Positives = 70/123 (56%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ A +P A V+ + M VW NK FET SYL
Sbjct: 5 VMASSATAVAPFQGLKSTASLPVARRPTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPL++EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKL
Sbjct: 65 PPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117
Query: 361 XMF 369
MF
Sbjct: 118 PMF 120
Score = 28.9 bits (63), Expect(2) = 2e-24
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV +E+ + ++PDAYVR++
Sbjct: 118 PMFGCTDASQVYKELQEAIASYPDAYVRIL 147
[45][TOP]
>UniRef100_A9PI67 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus
trichocarpa RepID=A9PI67_POPTR
Length = 170
Score = 95.9 bits (237), Expect(2) = 1e-23
Identities = 51/123 (41%), Positives = 67/123 (54%), Gaps = 7/123 (5%)
Frame = +1
Query: 22 SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ-------MMVWTPVNNKMFETFSYL 180
++AVA P +R + +P VA ++ M W P+NNK FE SYL
Sbjct: 8 ASAVAAPGYHGLRALPTKQPFATKNSVARSSRTVSNGSKTFCMKTWNPINNKKFEALSYL 67
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS++ IA ++DY++ GWIPCLEF E V E + G YYD RYWT+WKL
Sbjct: 68 PPLSEDSIAKEIDYMMKKGWIPCLEFDEVGS--VRREHSRMPG-----YYDGRYWTLWKL 120
Query: 361 XMF 369
MF
Sbjct: 121 PMF 123
Score = 37.4 bits (85), Expect(2) = 1e-23
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C + QVL EI +C KA+PDAY+R +A
Sbjct: 121 PMFGCTDSSQVLEEIHECKKAYPDAYIRCLA 151
[46][TOP]
>UniRef100_Q00SG4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus
tauri RepID=Q00SG4_OSTTA
Length = 168
Score = 112 bits (279), Expect = 2e-23
Identities = 53/118 (44%), Positives = 69/118 (58%), Gaps = 1/118 (0%)
Frame = +1
Query: 112 AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNE 291
A A MM+W P NKMFETFS+LPPLSD +IA Q Y++ NGW PC+EF +++ AY
Sbjct: 22 ANAKSMMIWRPHGNKMFETFSFLPPLSDAEIAKQCQYLLNNGWTPCIEFEDAEHAYADGH 81
Query: 292 SAIRF-GSVSCLYYDNRYWTMWKLXMFVLR*THAGAARDRRLHQGLPRCLRAPGGFES 462
S++ LYYDNRYW MWKL M+ + T A + P C GF++
Sbjct: 82 GWSNLDSSINSLYYDNRYWVMWKLPMYGCQNTDEVLAEVNMAKKCFPDCYIRVVGFDN 139
[47][TOP]
>UniRef100_C5Y519 Ribulose bisphosphate carboxylase small chain n=1 Tax=Sorghum
bicolor RepID=C5Y519_SORBI
Length = 169
Score = 103 bits (258), Expect(2) = 2e-23
Identities = 52/123 (42%), Positives = 69/123 (56%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ A + A V+ + M VW NK FET SYL
Sbjct: 5 VMASSATAVAPFQGLKSTATLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPL++EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKL
Sbjct: 65 PPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117
Query: 361 XMF 369
MF
Sbjct: 118 PMF 120
Score = 28.9 bits (63), Expect(2) = 2e-23
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV +E+ + ++PDAYVR++
Sbjct: 118 PMFGCTDASQVYKELQEAIASYPDAYVRIL 147
[48][TOP]
>UniRef100_A9TKI7 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9TKI7_PHYPA
Length = 181
Score = 95.9 bits (237), Expect(2) = 3e-23
Identities = 55/128 (42%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Frame = +1
Query: 7 AKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ-------MMVWTPVNNKMFE 165
A ++ S+AV+ +SV+ + LK + + A + Q M VW P+ FE
Sbjct: 15 AFAASSSAVSTSESTSVKAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFE 74
Query: 166 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 345
TFSYLPPLSD+ IA QVDY++ IPCLEF +D +N S S YYD RYW
Sbjct: 75 TFSYLPPLSDDAIAKQVDYMIQQKLIPCLEFDNADGVSRTNNS-------SPGYYDGRYW 127
Query: 346 TMWKLXMF 369
TMWKL MF
Sbjct: 128 TMWKLPMF 135
Score = 36.2 bits (82), Expect(2) = 3e-23
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C +P QVLREI +C K FP +VR++
Sbjct: 133 PMFGCQDPAQVLREIEECKKTFPGCFVRVL 162
[49][TOP]
>UniRef100_A7Q6D7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Vitis
vinifera RepID=A7Q6D7_VITVI
Length = 169
Score = 97.4 bits (241), Expect(2) = 3e-23
Identities = 44/90 (48%), Positives = 56/90 (62%)
Frame = +1
Query: 100 VAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAY 279
V+ ++ + M W P+NNK FET SYLPPLSD+ IA ++DY++ GWIPCLEF E +
Sbjct: 39 VSNGSKTHCMKTWNPINNKKFETLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEVGYVF 98
Query: 280 VSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
N YYD RYWT+WKL MF
Sbjct: 99 RKNSQIPG-------YYDGRYWTLWKLPMF 121
Score = 34.7 bits (78), Expect(2) = 3e-23
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C + QVL EI +C K +P+AY+R +A
Sbjct: 119 PMFGCNDASQVLNEIHECKKTYPNAYIRCLA 149
[50][TOP]
>UniRef100_C6T529 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max
RepID=C6T529_SOYBN
Length = 172
Score = 96.3 bits (238), Expect(2) = 4e-23
Identities = 44/81 (54%), Positives = 50/81 (61%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M W P+NNK FET SYLPPLSDE IA ++DY++ GWIPCLEF E N
Sbjct: 48 MKTWNPINNKKFETLSYLPPLSDESIAKEIDYMLKKGWIPCLEFDELGCVRRENSHMPE- 106
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
YYD RYWT+WKL MF
Sbjct: 107 ------YYDGRYWTLWKLPMF 121
Score = 35.4 bits (80), Expect(2) = 4e-23
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C + QVL+EI +C + +P+AY+R +A
Sbjct: 119 PMFACSDSSQVLKEIHECRRVYPNAYIRCLA 149
[51][TOP]
>UniRef100_Q43832 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1
Tax=Spinacia oleracea RepID=RBS2_SPIOL
Length = 180
Score = 95.5 bits (236), Expect(2) = 9e-23
Identities = 57/134 (42%), Positives = 74/134 (55%), Gaps = 11/134 (8%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTPV 147
V++ ++V+ PA++S V P LK PA K +N M VW
Sbjct: 5 VLSSAAVATVSRTPAQASMVAPFTGLKSTVGFPATKKNDDITSLASNGGRVQCMKVWPTQ 64
Query: 148 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 327
N K +ET SYLPPL+ +Q+A QVDY++ N W+PCLEF E+D +V E G Y
Sbjct: 65 NMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEF-ETDHGFVYREHHNSPG-----Y 118
Query: 328 YDNRYWTMWKLXMF 369
YD RYWTMWKL MF
Sbjct: 119 YDGRYWTMWKLPMF 132
Score = 35.0 bits (79), Expect(2) = 9e-23
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C +P QVL E+ +C K +P+A++R++
Sbjct: 130 PMFGCTDPAQVLNELEECKKEYPNAFIRII 159
[52][TOP]
>UniRef100_B6RHQ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Miscanthus x
giganteus RepID=B6RHQ4_9POAL
Length = 169
Score = 103 bits (256), Expect(2) = 1e-22
Identities = 52/123 (42%), Positives = 69/123 (56%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ A + A V+ + M VW NK FET SYL
Sbjct: 5 VMASSATAVAPFQWLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPL++EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKL
Sbjct: 65 PPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117
Query: 361 XMF 369
MF
Sbjct: 118 PMF 120
Score = 26.9 bits (58), Expect(2) = 1e-22
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV +E + ++PDAYVR++
Sbjct: 118 PMFGCTDASQVYKEPQEAIASYPDAYVRIL 147
[53][TOP]
>UniRef100_O20253 Ribulose bisphosphate carboxylase small chain n=1 Tax=Spinacia
oleracea RepID=O20253_SPIOL
Length = 180
Score = 94.7 bits (234), Expect(2) = 1e-22
Identities = 57/134 (42%), Positives = 73/134 (54%), Gaps = 11/134 (8%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTPV 147
V++ + V+ PA++S V P LK PA K +N M VW
Sbjct: 5 VLSSARVATVSRTPAQASMVAPFTGLKSTVGFPATKKNDDITSLASNGGRVQCMKVWPTQ 64
Query: 148 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 327
N K +ET SYLPPL+ +Q+A QVDY++ N W+PCLEF E+D +V E G Y
Sbjct: 65 NMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEF-ETDHGFVYREHHNSPG-----Y 118
Query: 328 YDNRYWTMWKLXMF 369
YD RYWTMWKL MF
Sbjct: 119 YDGRYWTMWKLPMF 132
Score = 35.0 bits (79), Expect(2) = 1e-22
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C +P QVL E+ +C K +P+A++R++
Sbjct: 130 PMFGCTDPAQVLNELEECKKEYPNAFIRII 159
[54][TOP]
>UniRef100_A4SA22 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus
lucimarinus CCE9901 RepID=A4SA22_OSTLU
Length = 169
Score = 108 bits (270), Expect = 2e-22
Identities = 56/139 (40%), Positives = 74/139 (53%), Gaps = 1/139 (0%)
Frame = +1
Query: 49 SSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIV 228
S++ +A A A A MM+W P NKMFETFS+LPPLSD +I+ QV Y++
Sbjct: 2 SAITQASAQVAKTVAVTTGKVANAKSMMIWRPHGNKMFETFSFLPPLSDAEISKQVQYLL 61
Query: 229 ANGWIPCLEFAESDKAYVSNES-AIRFGSVSCLYYDNRYWTMWKLXMFVLR*THAGAARD 405
NGW PC+EF +S AY A S++ YYDNRYW MWKL M+ + A
Sbjct: 62 NNGWTPCIEFEDSAHAYTDGHGWANMDTSINAGYYDNRYWVMWKLPMYGCQNPDEVIAEI 121
Query: 406 RRLHQGLPRCLRAPGGFES 462
+ P C GF++
Sbjct: 122 NTCIKCFPDCYVRVAGFDN 140
[55][TOP]
>UniRef100_A9T9D5 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9T9D5_PHYPA
Length = 182
Score = 95.5 bits (236), Expect(2) = 2e-22
Identities = 54/128 (42%), Positives = 74/128 (57%), Gaps = 7/128 (5%)
Frame = +1
Query: 7 AKSSVSAAVARPARSSVRPMAALKP----AVKAAPVAAPAQANQ---MMVWTPVNNKMFE 165
A ++ S+A + +SV+ + LK A KA +++ ++ M VW P+ FE
Sbjct: 15 AFTAASSAASTSESASVKAFSGLKSNTLFASKAQSLSSVQNGSRVQCMQVWNPIGMTKFE 74
Query: 166 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 345
TFSYLPPLSD+ IA QV+Y++ G IPCLEF V+ + R + S YYD RYW
Sbjct: 75 TFSYLPPLSDDSIAKQVEYMIQQGLIPCLEFD------VNADGVSRTNNSSPGYYDGRYW 128
Query: 346 TMWKLXMF 369
TMWKL MF
Sbjct: 129 TMWKLPMF 136
Score = 33.5 bits (75), Expect(2) = 2e-22
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVLREI +C K FP +VR++
Sbjct: 134 PMFGCQDSSQVLREIEECKKTFPGCFVRIL 163
[56][TOP]
>UniRef100_P19309 Ribulose bisphosphate carboxylase small chain SSU40A, chloroplastic
n=1 Tax=Lemna gibba RepID=RBS3_LEMGI
Length = 177
Score = 100 bits (250), Expect(2) = 2e-22
Identities = 59/135 (43%), Positives = 75/135 (55%), Gaps = 16/135 (11%)
Frame = +1
Query: 13 SSVSAAVAR--PARSSVRPMAALKPAVKAAPVAAPAQANQ--------------MMVWTP 144
+S +AAVAR PA+SS+ P A + +V P A +AN M VW P
Sbjct: 7 ASTAAAVARAGPAQSSMVPFNACRSSV---PFPATRKANNNLSTLPGNGGRVSCMQVWPP 63
Query: 145 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 324
K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + S
Sbjct: 64 EGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA-------SPG 116
Query: 325 YYDNRYWTMWKLXMF 369
YYD RYWTMWKL MF
Sbjct: 117 YYDGRYWTMWKLPMF 131
Score = 28.1 bits (61), Expect(2) = 2e-22
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV+ E+ + KA+P+ +VR++
Sbjct: 129 PMFGCTDASQVIAEVEEAKKAYPEYFVRII 158
[57][TOP]
>UniRef100_A9U4X7 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9U4X7_PHYPA
Length = 182
Score = 95.5 bits (236), Expect(2) = 3e-22
Identities = 55/128 (42%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Frame = +1
Query: 7 AKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ-------MMVWTPVNNKMFE 165
A ++ S+AV+ SSV+ + LK A + A + Q M VW P+ FE
Sbjct: 15 AFAAASSAVSTSEASSVKAFSGLKSATLFSSKAQTLSSVQNGSRVQCMQVWNPIGMTKFE 74
Query: 166 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 345
TFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R + S YYD RYW
Sbjct: 75 TFSYLPPLSDDAIAKQVEYMIQQNLIPCLEFD------VNANGVSRTNNSSPGYYDGRYW 128
Query: 346 TMWKLXMF 369
TMWKL MF
Sbjct: 129 TMWKLPMF 136
Score = 33.1 bits (74), Expect(2) = 3e-22
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVLREI +C K FP +VR++
Sbjct: 134 PMFGCQDSAQVLREIEECKKTFPGCFVRVL 163
[58][TOP]
>UniRef100_Q08185 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1
Tax=Mesembryanthemum crystallinum RepID=RBS5_MESCR
Length = 182
Score = 95.9 bits (237), Expect(2) = 4e-22
Identities = 55/131 (41%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
Frame = +1
Query: 7 AKSSVSAAVARPARSSVRPMAALKPAVKAAPV----------AAPAQANQMMVWTPVNNK 156
A ++++AA + V P LK ++ A PV A+ Q MVW P+ K
Sbjct: 9 AATTMAAATTTAQANMVAPFNGLK-SISAFPVTRKNNDITSVASNGGRVQCMVWPPLGMK 67
Query: 157 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 336
FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G YYD
Sbjct: 68 KFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG-----YYDG 121
Query: 337 RYWTMWKLXMF 369
RYWTMWKL MF
Sbjct: 122 RYWTMWKLPMF 132
Score = 32.3 bits (72), Expect(2) = 4e-22
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C +P QV+ E+ + KA+P+A++R++
Sbjct: 130 PMFGCTDPSQVVAELEEAKKAYPEAFIRII 159
[59][TOP]
>UniRef100_P08706 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1
Tax=Solanum lycopersicum RepID=RBS1_SOLLC
Length = 181
Score = 98.2 bits (243), Expect(2) = 4e-22
Identities = 43/81 (53%), Positives = 58/81 (71%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E+++ +V E+
Sbjct: 59 MQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETERGFVYRENNSSP 117
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 118 G-----YYDGRYWTMWKLPMF 133
Score = 30.0 bits (66), Expect(2) = 4e-22
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + KA+P A+VR++
Sbjct: 131 PMFGCTDATQVLAEVQEAKKAYPQAWVRII 160
[60][TOP]
>UniRef100_B9S5G3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ricinus
communis RepID=B9S5G3_RICCO
Length = 181
Score = 97.8 bits (242), Expect(2) = 4e-22
Identities = 58/132 (43%), Positives = 74/132 (56%), Gaps = 13/132 (9%)
Frame = +1
Query: 13 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNN 153
SS S + + PA+++ V P LK A + PV A + M VW P+
Sbjct: 7 SSASVSRSSPAQATMVAPFTGLKSAA-SFPVTRKANNDITSIASNGGRVQCMQVWPPLGK 65
Query: 154 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 333
K FET SYLP L+DEQ+A +VDY++ GWIPCLEF E + +V E+ G YYD
Sbjct: 66 KKFETLSYLPDLTDEQLAKEVDYLLRKGWIPCLEF-ELEHGFVYRENHRSPG-----YYD 119
Query: 334 NRYWTMWKLXMF 369
RYWTMWKL MF
Sbjct: 120 GRYWTMWKLPMF 131
Score = 30.4 bits (67), Expect(2) = 4e-22
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + KA+P++++R++
Sbjct: 129 PMFGCSDSTQVLKELDEAKKAYPNSFIRII 158
[61][TOP]
>UniRef100_A9S3R8 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9S3R8_PHYPA
Length = 181
Score = 95.1 bits (235), Expect(2) = 4e-22
Identities = 54/128 (42%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Frame = +1
Query: 7 AKSSVSAAVARPARSSVRPMAALKPAV-------KAAPVAAPAQANQMMVWTPVNNKMFE 165
A ++ S+ V+ +SV+ + LK A + + V ++ N M VW P+ FE
Sbjct: 15 AFAAASSGVSTSESTSVKAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFE 74
Query: 166 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 345
TFSYLPPLSD+ IA QV+Y++ IPCLEF S N S S YYD RYW
Sbjct: 75 TFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSKGVTRENNS-------SPGYYDGRYW 127
Query: 346 TMWKLXMF 369
TMWKL MF
Sbjct: 128 TMWKLPMF 135
Score = 33.1 bits (74), Expect(2) = 4e-22
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVLREI +C K FP +VR++
Sbjct: 133 PMFGCQDSAQVLREIEECKKTFPGCFVRVL 162
[62][TOP]
>UniRef100_O65194 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Medicago sativa RepID=RBS_MEDSA
Length = 180
Score = 97.8 bits (242), Expect(2) = 4e-22
Identities = 45/85 (52%), Positives = 58/85 (68%)
Frame = +1
Query: 115 QANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNES 294
+ N M VW PV K FET SYLPPL++EQ+A +V+Y++ GWIPCLEF E +K +V E+
Sbjct: 54 RVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEF-ELEKGFVYREN 112
Query: 295 AIRFGSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMW+L +F
Sbjct: 113 HRSPG-----YYDGRYWTMWRLPLF 132
Score = 30.4 bits (67), Expect(2) = 4e-22
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +2
Query: 389 QVLREIVDCTKAFPDAYVRLV 451
QVL+E+ DC +PD+++R++
Sbjct: 139 QVLKELADCKAEYPDSFIRII 159
[63][TOP]
>UniRef100_A9TWU8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9TWU8_PHYPA
Length = 183
Score = 94.0 bits (232), Expect(2) = 5e-22
Identities = 54/128 (42%), Positives = 71/128 (55%), Gaps = 7/128 (5%)
Frame = +1
Query: 7 AKSSVSAAVARPARSSVRPMAALKP-------AVKAAPVAAPAQANQMMVWTPVNNKMFE 165
A ++ S+AV+ SSV+ + LK A + V ++ M VW P+ FE
Sbjct: 17 AFAAASSAVSTSESSSVKAFSGLKSNTLFSSKAQTLSSVQNGSRVQCMQVWNPIGMTKFE 76
Query: 166 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 345
TFSYLPPLSD+ IA QV+Y++ IPCLEF ++ +N S S YYD RYW
Sbjct: 77 TFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNANGVSRTNNS-------SPGYYDGRYW 129
Query: 346 TMWKLXMF 369
TMWKL MF
Sbjct: 130 TMWKLPMF 137
Score = 33.9 bits (76), Expect(2) = 5e-22
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVLREI +C K FP +VR++
Sbjct: 135 PMFGCNDSAQVLREIEECKKTFPGCFVRVL 164
[64][TOP]
>UniRef100_A9U4X8 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9U4X8_PHYPA
Length = 182
Score = 94.7 bits (234), Expect(2) = 5e-22
Identities = 55/128 (42%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Frame = +1
Query: 7 AKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ-------MMVWTPVNNKMFE 165
A ++ S+AV SSV+ + LK A + A + Q M VW P+ FE
Sbjct: 15 AFAAASSAVMTSEASSVKAFSGLKSATLFSSKAQTLSSVQNGSRVQCMQVWNPIGMTKFE 74
Query: 166 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 345
TFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R + S YYD RYW
Sbjct: 75 TFSYLPPLSDDAIAKQVEYMIQQNLIPCLEFD------VNANGVSRTNNSSPGYYDGRYW 128
Query: 346 TMWKLXMF 369
TMWKL MF
Sbjct: 129 TMWKLPMF 136
Score = 33.1 bits (74), Expect(2) = 5e-22
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVLREI +C K FP +VR++
Sbjct: 134 PMFGCQDSAQVLREIEECKKTFPGCFVRVL 163
[65][TOP]
>UniRef100_A9YTZ8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Solanum
tuberosum RepID=A9YTZ8_SOLTU
Length = 181
Score = 95.9 bits (237), Expect(2) = 5e-22
Identities = 43/81 (53%), Positives = 56/81 (69%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ +V E+
Sbjct: 59 MQVWPPINTKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSP 117
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 118 G-----YYDGRYWTMWKLPMF 133
Score = 32.0 bits (71), Expect(2) = 5e-22
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ +C K++P A++R++
Sbjct: 131 PMFGCTDATQVLAEVQECKKSYPQAWIRII 160
[66][TOP]
>UniRef100_Q9ZP07 Ribulose bisphosphate carboxylase small chain n=1 Tax=Cicer
arietinum RepID=Q9ZP07_CICAR
Length = 181
Score = 94.4 bits (233), Expect(2) = 5e-22
Identities = 52/132 (39%), Positives = 70/132 (53%), Gaps = 16/132 (12%)
Frame = +1
Query: 22 SAAVARPARSSVRPMAALKPAVKAAPVAA----------------PAQANQMMVWTPVNN 153
S+AV R+S P A+ P V +A + + M VW P+
Sbjct: 8 SSAVTTVKRASSVPSGAVAPFVGLKSMAGFPVRKVNNDITSIASNGGRVHCMQVWPPIGK 67
Query: 154 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 333
K FET SYLPPL++EQ+ +V+Y++ GW+PCLEF E +K +V E G YYD
Sbjct: 68 KKFETLSYLPPLTEEQLLKEVEYLLRKGWVPCLEF-ELEKGFVYREHNNSPG-----YYD 121
Query: 334 NRYWTMWKLXMF 369
RYWTMWKL +F
Sbjct: 122 GRYWTMWKLPLF 133
Score = 33.5 bits (75), Expect(2) = 5e-22
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E +QVL+E+ + KA+P+A+VR++
Sbjct: 131 PLFGCTEAVQVLKELQEVVKAYPNAFVRII 160
[67][TOP]
>UniRef100_P10795 Ribulose bisphosphate carboxylase small chain 1A, chloroplastic n=2
Tax=Arabidopsis thaliana RepID=RBS1A_ARATH
Length = 180
Score = 94.7 bits (234), Expect(2) = 5e-22
Identities = 57/136 (41%), Positives = 77/136 (56%), Gaps = 14/136 (10%)
Frame = +1
Query: 4 IAKSSVSAA--VARPARSS-VRPMAALK-----PAVKAAP------VAAPAQANQMMVWT 141
+A S +S+A VA PA+++ V P LK PA + A + + N M VW
Sbjct: 1 MASSMLSSATMVASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWP 60
Query: 142 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 321
P+ K FET SYLP L+D ++A +VDY++ N WIPC+EF E + +V E G
Sbjct: 61 PIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEF-ELEHGFVYREHGNSPG---- 115
Query: 322 LYYDNRYWTMWKLXMF 369
YYD RYWTMWKL +F
Sbjct: 116 -YYDGRYWTMWKLPLF 130
Score = 33.1 bits (74), Expect(2) = 5e-22
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C K +P+A++R++
Sbjct: 128 PLFGCTDSAQVLKEVEECKKEYPNAFIRII 157
[68][TOP]
>UniRef100_A9RG04 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9RG04_PHYPA
Length = 184
Score = 92.8 bits (229), Expect(2) = 7e-22
Identities = 52/123 (42%), Positives = 68/123 (55%), Gaps = 7/123 (5%)
Frame = +1
Query: 22 SAAVARPARSSVRPMAALKP-------AVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
S+ V+ +SV+ + LK A K + V ++ M VW P+ FETFSYL
Sbjct: 22 SSGVSTSEATSVKAFSGLKSTTLFSGNARKLSSVQNGSRVQCMQVWNPIGMTKFETFSYL 81
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLSD+ IA QV+Y++ IPCLEF V++ R + S YYD RYWTMWKL
Sbjct: 82 PPLSDDAIAKQVEYMIQQKLIPCLEFD------VNSNGVSRVNNSSPGYYDGRYWTMWKL 135
Query: 361 XMF 369
MF
Sbjct: 136 PMF 138
Score = 34.7 bits (78), Expect(2) = 7e-22
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVLREI +C K FP YVR++
Sbjct: 136 PMFGCQDSAQVLREIEECKKTFPGCYVRVL 165
[69][TOP]
>UniRef100_Q3LFQ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Panax ginseng
RepID=Q3LFQ4_PANGI
Length = 183
Score = 92.8 bits (229), Expect(2) = 7e-22
Identities = 58/136 (42%), Positives = 78/136 (57%), Gaps = 14/136 (10%)
Frame = +1
Query: 4 IAKSSVSAAVAR--PARSS-VRPMAALKPAVKAAPV--------AAPAQANQ---MMVWT 141
+ S+ AAV+R PA++S V P LK + A PV + P+ + M VW
Sbjct: 5 VISSATVAAVSRAVPAQASMVAPFTGLK-STAAFPVTRKVNDITSLPSNGGRVQCMKVWP 63
Query: 142 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 321
P+ K FET SYLP L+ EQ++ +VDY++ +GW+PCLEF E + +V E G
Sbjct: 64 PLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEF-ELEHGFVYREHHHSPG---- 118
Query: 322 LYYDNRYWTMWKLXMF 369
YYD RYWTMWKL MF
Sbjct: 119 -YYDGRYWTMWKLPMF 133
Score = 34.7 bits (78), Expect(2) = 7e-22
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C K +P+AY+R++
Sbjct: 131 PMFGCTDSSQVLKEVEECKKEYPNAYIRII 160
[70][TOP]
>UniRef100_A9SCN2 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9SCN2_PHYPA
Length = 182
Score = 94.4 bits (233), Expect(2) = 7e-22
Identities = 57/139 (41%), Positives = 77/139 (55%), Gaps = 16/139 (11%)
Frame = +1
Query: 1 VIAKSSV---------SAAVARPARSSVRPMAALKPAV----KAAPVAAPAQANQ---MM 132
V+A SSV S++V+ +SV+ + LK A KA +++ ++ M
Sbjct: 4 VVAASSVVAPATFVAASSSVSNSKSNSVKAFSGLKSATLFTSKAETLSSVQNGSRVQCMQ 63
Query: 133 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 312
VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V++ R +
Sbjct: 64 VWNPIGQTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFD------VNSNGVSRANN 117
Query: 313 VSCLYYDNRYWTMWKLXMF 369
S YYD RYWTMWKL MF
Sbjct: 118 SSPGYYDGRYWTMWKLPMF 136
Score = 33.1 bits (74), Expect(2) = 7e-22
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVLREI +C K FP +VR++
Sbjct: 134 PMFGCQDSAQVLREIEECKKTFPGCFVRVL 163
[71][TOP]
>UniRef100_P07179 Ribulose bisphosphate carboxylase small chain 2A, chloroplastic n=1
Tax=Solanum lycopersicum RepID=RBS2A_SOLLC
Length = 180
Score = 97.4 bits (241), Expect(2) = 7e-22
Identities = 54/134 (40%), Positives = 76/134 (56%), Gaps = 11/134 (8%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ------MMVWTPV 147
VI+ ++V+ S V P LK P K + + A+ M VW P+
Sbjct: 5 VISSAAVATRSNVTQASMVAPFTGLKSSATFPVTKKQNLDITSIASNGGRVSCMQVWPPI 64
Query: 148 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 327
N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E++ +V E+ + S Y
Sbjct: 65 NMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYREN-----NKSPGY 118
Query: 328 YDNRYWTMWKLXMF 369
YD RYWTMWKL MF
Sbjct: 119 YDGRYWTMWKLPMF 132
Score = 30.0 bits (66), Expect(2) = 7e-22
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + KA+P A+VR++
Sbjct: 130 PMFGCTDATQVLAEVQEAKKAYPQAWVRII 159
[72][TOP]
>UniRef100_Q08183 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1
Tax=Mesembryanthemum crystallinum RepID=RBS3_MESCR
Length = 183
Score = 94.7 bits (234), Expect(2) = 9e-22
Identities = 54/132 (40%), Positives = 69/132 (52%), Gaps = 11/132 (8%)
Frame = +1
Query: 7 AKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP-----------AQANQMMVWTPVNN 153
A ++++AA + V P LK +V A PV + M VW P+
Sbjct: 9 AATTMAAATTTAQANMVAPFNGLK-SVSAFPVTRKNNDITSVASNGGRVQCMQVWPPLGK 67
Query: 154 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 333
K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G YYD
Sbjct: 68 KKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG-----YYD 121
Query: 334 NRYWTMWKLXMF 369
RYWTMWKL MF
Sbjct: 122 GRYWTMWKLPMF 133
Score = 32.3 bits (72), Expect(2) = 9e-22
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C +P QV+ E+ + KA+P+A++R++
Sbjct: 131 PMFGCTDPSQVVAELEEAKKAYPEAFIRII 160
[73][TOP]
>UniRef100_P16032 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1
Tax=Mesembryanthemum crystallinum RepID=RBS1_MESCR
Length = 182
Score = 94.7 bits (234), Expect(2) = 9e-22
Identities = 55/135 (40%), Positives = 73/135 (54%), Gaps = 12/135 (8%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP-----------AQANQMMVWTP 144
+++ ++V+ PA++S V P LK +V A PV + M VW P
Sbjct: 5 MVSSAAVATVNRTPAQASMVAPFNGLK-SVAAFPVTKKNNDITSVATNGGRVQCMQVWPP 63
Query: 145 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 324
+ K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G
Sbjct: 64 LGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG----- 117
Query: 325 YYDNRYWTMWKLXMF 369
YYD RYWTMWKL MF
Sbjct: 118 YYDGRYWTMWKLPMF 132
Score = 32.3 bits (72), Expect(2) = 9e-22
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C +P QV+ E+ + KA+P+A++R++
Sbjct: 130 PMFGCTDPSQVVAELEEAKKAYPEAFIRII 159
[74][TOP]
>UniRef100_A9YTZ7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Solanum
tuberosum RepID=A9YTZ7_SOLTU
Length = 181
Score = 95.1 bits (235), Expect(2) = 9e-22
Identities = 43/81 (53%), Positives = 56/81 (69%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ +V E+
Sbjct: 59 MQVWPPINMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSP 117
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 118 G-----YYDGRYWTMWKLPMF 133
Score = 32.0 bits (71), Expect(2) = 9e-22
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ +C K++P A++R++
Sbjct: 131 PMFGCTDTTQVLAEVQECKKSYPQAWIRII 160
[75][TOP]
>UniRef100_P26574 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1
Tax=Solanum tuberosum RepID=RBS1_SOLTU
Length = 181
Score = 95.1 bits (235), Expect(2) = 9e-22
Identities = 43/81 (53%), Positives = 56/81 (69%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ +V E+
Sbjct: 59 MQVWPPINMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSP 117
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 118 G-----YYDGRYWTMWKLPMF 133
Score = 32.0 bits (71), Expect(2) = 9e-22
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ +C K++P A++R++
Sbjct: 131 PMFGCTDATQVLAEVQECKKSYPQAWIRII 160
[76][TOP]
>UniRef100_A9SRS0 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9SRS0_PHYPA
Length = 182
Score = 93.6 bits (231), Expect(2) = 1e-21
Identities = 54/128 (42%), Positives = 69/128 (53%), Gaps = 7/128 (5%)
Frame = +1
Query: 7 AKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ-------MMVWTPVNNKMFE 165
A S+ S+AV+ +SV+ + LK + A + Q M VW P+ FE
Sbjct: 15 ALSAASSAVSTSESTSVKAFSGLKSTTLFSSKAQTLSSVQNGSRVQCMQVWNPIGMTKFE 74
Query: 166 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 345
TFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R + S YYD RYW
Sbjct: 75 TFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFD------VNANGVSRANNSSPGYYDGRYW 128
Query: 346 TMWKLXMF 369
TMWKL MF
Sbjct: 129 TMWKLPMF 136
Score = 33.1 bits (74), Expect(2) = 1e-21
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVLREI +C K FP +VR++
Sbjct: 134 PMFGCQDSAQVLREIEECKKTFPGCFVRVL 163
[77][TOP]
>UniRef100_P05349 Ribulose bisphosphate carboxylase small chain 3B, chloroplastic n=1
Tax=Solanum lycopersicum RepID=RBS3B_SOLLC
Length = 180
Score = 96.7 bits (239), Expect(2) = 1e-21
Identities = 43/81 (53%), Positives = 57/81 (70%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E++ +V E+
Sbjct: 58 MQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYRENHKSP 116
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 117 G-----YYDGRYWTMWKLPMF 132
Score = 30.0 bits (66), Expect(2) = 1e-21
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + KA+P A+VR++
Sbjct: 130 PMFGCTDATQVLAEVQEAKKAYPQAWVRII 159
[78][TOP]
>UniRef100_P07180 Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic
n=1 Tax=Solanum lycopersicum RepID=RBS3A_SOLLC
Length = 180
Score = 96.7 bits (239), Expect(2) = 1e-21
Identities = 43/81 (53%), Positives = 57/81 (70%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E++ +V E+
Sbjct: 58 MQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYRENHKSP 116
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 117 G-----YYDGRYWTMWKLPMF 132
Score = 30.0 bits (66), Expect(2) = 1e-21
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + KA+P A+VR++
Sbjct: 130 PMFGCTDATQVLAEVQEAKKAYPQAWVRII 159
[79][TOP]
>UniRef100_P19310 Ribulose bisphosphate carboxylase small chain SSU40B, chloroplastic
n=1 Tax=Lemna gibba RepID=RBS4_LEMGI
Length = 177
Score = 98.6 bits (244), Expect(2) = 1e-21
Identities = 57/135 (42%), Positives = 75/135 (55%), Gaps = 16/135 (11%)
Frame = +1
Query: 13 SSVSAAVAR--PARSSVRPMAALKPAVKAAPVAAPAQANQ--------------MMVWTP 144
+S +AAVAR PA++++ P A + +V P A +AN M VW P
Sbjct: 7 ASTAAAVARAGPAQTNMVPFNACRSSV---PFPATRKANNDLSTLPSNGGRVSCMQVWPP 63
Query: 145 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 324
K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + S
Sbjct: 64 EGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA-------SPG 116
Query: 325 YYDNRYWTMWKLXMF 369
YYD RYWTMWKL MF
Sbjct: 117 YYDGRYWTMWKLPMF 131
Score = 28.1 bits (61), Expect(2) = 1e-21
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV+ E+ + KA+P+ +VR++
Sbjct: 129 PMFGCTDASQVIAEVEEAKKAYPEYFVRII 158
[80][TOP]
>UniRef100_Q9XGX4 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1
Tax=Amaranthus hypochondriacus RepID=RBS3_AMAHP
Length = 180
Score = 92.8 bits (229), Expect(2) = 2e-21
Identities = 45/81 (55%), Positives = 53/81 (65%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW PV K FET SYLPPLSD Q+ AQV Y++ NGWIPC+EF E + +V E+
Sbjct: 58 MQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNNGWIPCIEF-ELEHPFVYRENHRSP 116
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G Y D RYWTMWKL M+
Sbjct: 117 G-----YQDGRYWTMWKLPMY 132
Score = 33.5 bits (75), Expect(2) = 2e-21
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C +P QVL E+ + KA+P A++R++
Sbjct: 130 PMYGCTDPAQVLNEVEEAKKAYPSAFIRII 159
[81][TOP]
>UniRef100_Q08186 Ribulose bisphosphate carboxylase small chain 6, chloroplastic n=1
Tax=Mesembryanthemum crystallinum RepID=RBS6_MESCR
Length = 186
Score = 93.6 bits (231), Expect(2) = 2e-21
Identities = 56/134 (41%), Positives = 71/134 (52%), Gaps = 12/134 (8%)
Frame = +1
Query: 4 IAKSSVSAAVARPARSSVRPMAALKPAVKAAPVA---------APAQANQ---MMVWTPV 147
+A ++ S + A S V P LK +V A PV P+ + M VW P+
Sbjct: 11 VATTAASRSAGAQA-SMVAPFTGLK-SVSAFPVTRKSSNDLSTVPSNGGKVQCMQVWPPL 68
Query: 148 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 327
K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G Y
Sbjct: 69 GKKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG-----Y 122
Query: 328 YDNRYWTMWKLXMF 369
YD RYWTMWKL MF
Sbjct: 123 YDGRYWTMWKLPMF 136
Score = 32.3 bits (72), Expect(2) = 2e-21
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C +P QV+ E+ + KA+P+A++R++
Sbjct: 134 PMFGCTDPSQVVAELEEAKKAYPEAFIRII 163
[82][TOP]
>UniRef100_Q08184 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1
Tax=Mesembryanthemum crystallinum RepID=RBS4_MESCR
Length = 183
Score = 93.6 bits (231), Expect(2) = 2e-21
Identities = 53/132 (40%), Positives = 69/132 (52%), Gaps = 11/132 (8%)
Frame = +1
Query: 7 AKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP-----------AQANQMMVWTPVNN 153
A ++++AA + V P LK ++ A PV + M VW P+
Sbjct: 9 AATTMAAATTTAQANMVAPFNGLK-SISAFPVTRKNNDITSVASNGGRVQCMQVWPPLGM 67
Query: 154 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 333
K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G YYD
Sbjct: 68 KKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG-----YYD 121
Query: 334 NRYWTMWKLXMF 369
RYWTMWKL MF
Sbjct: 122 GRYWTMWKLPMF 133
Score = 32.3 bits (72), Expect(2) = 2e-21
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C +P QV+ E+ + KA+P+A++R++
Sbjct: 131 PMFGCTDPSQVVAELEEAKKAYPEAFIRII 160
[83][TOP]
>UniRef100_Q96542 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Betula pendula RepID=RBS_BETVE
Length = 182
Score = 90.9 bits (224), Expect(2) = 2e-21
Identities = 60/134 (44%), Positives = 72/134 (53%), Gaps = 15/134 (11%)
Frame = +1
Query: 13 SSVSAAVAR--PARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPV 147
S+ AAV+R PA+SS V P LK + A PV + M VW P+
Sbjct: 8 SATVAAVSRASPAQSSMVAPFTCLK-STSAFPVTQKTNNDITSIASNGGRVQCMQVWPPL 66
Query: 148 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 327
K FET SYLPPLS EQ+A +VDY++ IPCLEF E + +V E G Y
Sbjct: 67 GLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEF-ELEHGFVYREHNRSPG-----Y 120
Query: 328 YDNRYWTMWKLXMF 369
YD RYWTMWKL MF
Sbjct: 121 YDGRYWTMWKLPMF 134
Score = 35.0 bits (79), Expect(2) = 2e-21
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C KA+P A++R++
Sbjct: 132 PMFGCNDSSQVLKELEECKKAYPSAFIRII 161
[84][TOP]
>UniRef100_P32764 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1
Tax=Solanum tuberosum RepID=RBS3_SOLTU
Length = 181
Score = 96.3 bits (238), Expect(2) = 2e-21
Identities = 44/81 (54%), Positives = 56/81 (69%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+
Sbjct: 59 MQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSP 117
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 118 G-----YYDGRYWTMWKLPMF 133
Score = 29.6 bits (65), Expect(2) = 2e-21
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + KA+P A++R++
Sbjct: 131 PMFGCTDATQVLAEVQEAKKAYPQAWIRII 160
[85][TOP]
>UniRef100_P26577 Ribulose bisphosphate carboxylase small chain 2C, chloroplastic n=1
Tax=Solanum tuberosum RepID=RBSC_SOLTU
Length = 180
Score = 96.3 bits (238), Expect(2) = 2e-21
Identities = 44/81 (54%), Positives = 57/81 (70%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+
Sbjct: 58 MQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYREN---- 112
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
+ S YYD RYWTMWKL MF
Sbjct: 113 -NKSPGYYDGRYWTMWKLPMF 132
Score = 29.6 bits (65), Expect(2) = 2e-21
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + KA+P A++R++
Sbjct: 130 PMFGCTDATQVLAEVEEAKKAYPQAWIRII 159
[86][TOP]
>UniRef100_P26576 Ribulose bisphosphate carboxylase small chain 2B, chloroplastic n=1
Tax=Solanum tuberosum RepID=RBSB_SOLTU
Length = 180
Score = 96.3 bits (238), Expect(2) = 2e-21
Identities = 44/81 (54%), Positives = 57/81 (70%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+
Sbjct: 58 MQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYREN---- 112
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
+ S YYD RYWTMWKL MF
Sbjct: 113 -NKSPGYYDGRYWTMWKLPMF 132
Score = 29.6 bits (65), Expect(2) = 2e-21
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + KA+P A++R++
Sbjct: 130 PMFGCTDATQVLAEVEEAKKAYPQAWIRII 159
[87][TOP]
>UniRef100_P26575 Ribulose bisphosphate carboxylase small chain 2A, chloroplastic n=1
Tax=Solanum tuberosum RepID=RBSA_SOLTU
Length = 180
Score = 96.3 bits (238), Expect(2) = 2e-21
Identities = 44/81 (54%), Positives = 57/81 (70%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+
Sbjct: 58 MQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYREN---- 112
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
+ S YYD RYWTMWKL MF
Sbjct: 113 -NKSPGYYDGRYWTMWKLPMF 132
Score = 29.6 bits (65), Expect(2) = 2e-21
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + KA+P A++R++
Sbjct: 130 PMFGCTDATQVLAEVEEAKKAYPQAWIRII 159
[88][TOP]
>UniRef100_A0FIP7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Camellia
sinensis RepID=A0FIP7_CAMSI
Length = 176
Score = 94.4 bits (233), Expect(2) = 2e-21
Identities = 56/135 (41%), Positives = 72/135 (53%), Gaps = 13/135 (9%)
Frame = +1
Query: 4 IAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAP------------AQANQMMVWTP 144
+A S +S+AV PA++S+ P LK + A PV + M VW P
Sbjct: 1 MAASIISSAVVAPAQASMAAPFTGLK-STSAFPVTRKLDTDITSLASNGGRVQCMKVWPP 59
Query: 145 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 324
+ K FET SYLPPL+ Q+ +VDY++ GWIPCLEF+ V R + S
Sbjct: 60 LGLKKFETLSYLPPLTQAQLGKEVDYLIRLGWIPCLEFS------VQGGFVYREHNKSPG 113
Query: 325 YYDNRYWTMWKLXMF 369
YYD RYWTMWKL MF
Sbjct: 114 YYDGRYWTMWKLPMF 128
Score = 31.6 bits (70), Expect(2) = 2e-21
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C K +P +++R++
Sbjct: 126 PMFGCTDSSQVLKEVEECKKEYPQSFIRII 155
[89][TOP]
>UniRef100_Q42516 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1
Tax=Amaranthus hypochondriacus RepID=RBS1_AMAHP
Length = 183
Score = 92.0 bits (227), Expect(2) = 3e-21
Identities = 56/132 (42%), Positives = 70/132 (53%), Gaps = 11/132 (8%)
Frame = +1
Query: 7 AKSSVSAAVARPARSSVRPMAALK-----PAVKAAP---VAAPAQANQ---MMVWTPVNN 153
A + +AA A S V P LK P K + + P+ + M VW PV
Sbjct: 9 AAMATTAATAGAQASMVAPFNGLKSFATFPITKKSSNDFSSLPSNGGRVQCMQVWPPVGK 68
Query: 154 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 333
K FET SYLPPLSD Q+ AQV Y++ GWIPC+EF E + +V E+ G Y D
Sbjct: 69 KKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEF-ELEHPFVYRENHRSPG-----YQD 122
Query: 334 NRYWTMWKLXMF 369
RYWTMWKL M+
Sbjct: 123 GRYWTMWKLPMY 134
Score = 33.5 bits (75), Expect(2) = 3e-21
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C +P QVL E+ + KA+P A++R++
Sbjct: 132 PMYGCTDPAQVLNEVEEAKKAYPSAFIRII 161
[90][TOP]
>UniRef100_A9U377 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9U377_PHYPA
Length = 182
Score = 92.4 bits (228), Expect(2) = 3e-21
Identities = 54/128 (42%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Frame = +1
Query: 7 AKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ-------MMVWTPVNNKMFE 165
A ++ SA+V +SV+ + LK A A + Q M VW P+ FE
Sbjct: 15 AFAAASASVGSADSTSVKAFSGLKSATLFTSKAQTLSSVQNRSRVQCMQVWNPIGMTKFE 74
Query: 166 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 345
TFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R + S YYD RYW
Sbjct: 75 TFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFD------VNANGVSRTNNSSPGYYDGRYW 128
Query: 346 TMWKLXMF 369
TMWKL MF
Sbjct: 129 TMWKLPMF 136
Score = 33.1 bits (74), Expect(2) = 3e-21
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVLREI +C K FP +VR++
Sbjct: 134 PMFGCQDSAQVLREIEECKKTFPGCFVRVL 163
[91][TOP]
>UniRef100_Q04450 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1
Tax=Mesembryanthemum crystallinum RepID=RBS2_MESCR
Length = 180
Score = 94.4 bits (233), Expect(2) = 3e-21
Identities = 58/132 (43%), Positives = 72/132 (54%), Gaps = 14/132 (10%)
Frame = +1
Query: 16 SVSAAVAR--PARSS-VRPMAALKPAVKAAPVAAPA-----------QANQMMVWTPVNN 153
S +A V R PA++S V P LK +V A PV + + M VW P+
Sbjct: 6 SNAAVVGRTTPAQASMVAPFTGLK-SVSAFPVTKKSNDITSIASNGGRVQCMQVWPPLGK 64
Query: 154 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 333
K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G YYD
Sbjct: 65 KKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG-----YYD 118
Query: 334 NRYWTMWKLXMF 369
RYWTMWKL MF
Sbjct: 119 GRYWTMWKLPMF 130
Score = 31.2 bits (69), Expect(2) = 3e-21
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C +P QV+ E+ + KA+P+A+ R++
Sbjct: 128 PMFGCTDPSQVVAELEEAKKAYPEAFTRII 157
[92][TOP]
>UniRef100_Q41373 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Saccharum sp. RepID=RBS_SACHY
Length = 168
Score = 104 bits (260), Expect = 3e-21
Identities = 53/123 (43%), Positives = 69/123 (56%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ +AA + +S+ A + A V+ + M VW NK FET SYL
Sbjct: 5 VMASSATAAAPFQGLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPL+ EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKL
Sbjct: 65 PPLTQEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117
Query: 361 XMF 369
MF
Sbjct: 118 PMF 120
[93][TOP]
>UniRef100_P22433 Ribulose bisphosphate carboxylase small chain S41, chloroplastic
n=1 Tax=Nicotiana sylvestris RepID=RBS2_NICSY
Length = 181
Score = 95.5 bits (236), Expect(2) = 3e-21
Identities = 43/81 (53%), Positives = 57/81 (70%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+N K +ET SYLP LS+EQ+ +V+Y++ NGW+PCLEF E++ +V E+
Sbjct: 59 MQVWPPINKKKYETLSYLPDLSEEQLLREVEYLLKNGWVPCLEF-ETEHGFVYREN---- 113
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
+ S YYD RYWTMWKL MF
Sbjct: 114 -NKSPGYYDGRYWTMWKLPMF 133
Score = 29.6 bits (65), Expect(2) = 3e-21
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + KA+P A++R++
Sbjct: 131 PMFGCTDATQVLAEVEEAKKAYPQAWIRII 160
[94][TOP]
>UniRef100_B7FHB2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Medicago
truncatula RepID=B7FHB2_MEDTR
Length = 180
Score = 99.4 bits (246), Expect(2) = 3e-21
Identities = 57/134 (42%), Positives = 74/134 (55%), Gaps = 18/134 (13%)
Frame = +1
Query: 22 SAAVARPARSS------VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPV 147
SAAV +R+S V P LK + A PV + N M VW P+
Sbjct: 6 SAAVTTVSRASSTQANLVAPFTGLKSSA-AFPVTKKTNNDITSIASNGGRVNCMQVWPPI 64
Query: 148 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 327
K FET SYLPPL++EQ+A +V+Y++ GW+PCLEF E +K +V E+ G Y
Sbjct: 65 GKKKFETLSYLPPLTEEQLAKEVEYLIRKGWVPCLEF-ELEKGFVYRENHSSPG-----Y 118
Query: 328 YDNRYWTMWKLXMF 369
YD RYWTMWKL +F
Sbjct: 119 YDGRYWTMWKLPLF 132
Score = 25.8 bits (55), Expect(2) = 3e-21
Identities = 7/21 (33%), Positives = 17/21 (80%)
Frame = +2
Query: 389 QVLREIVDCTKAFPDAYVRLV 451
QVL+E+ + A+P++++R++
Sbjct: 139 QVLKELAEAKAAYPESFIRII 159
[95][TOP]
>UniRef100_P69250 Ribulose bisphosphate carboxylase small chain, chloroplastic n=2
Tax=Nicotiana RepID=RBS1_NICSY
Length = 180
Score = 95.5 bits (236), Expect(2) = 3e-21
Identities = 43/81 (53%), Positives = 57/81 (70%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+N K +ET SYLP LS EQ+ ++V+Y++ NGW+PCLEF E++ +V E+
Sbjct: 58 MQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEF-ETEHGFVYREN---- 112
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
+ S YYD RYWTMWKL MF
Sbjct: 113 -NKSPGYYDGRYWTMWKLPMF 132
Score = 29.6 bits (65), Expect(2) = 3e-21
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + KA+P A++R++
Sbjct: 130 PMFGCTDATQVLAEVEEAKKAYPQAWIRII 159
[96][TOP]
>UniRef100_Q41351 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Stellaria longipes RepID=RBS_STELP
Length = 180
Score = 95.1 bits (235), Expect(2) = 3e-21
Identities = 49/120 (40%), Positives = 68/120 (56%)
Frame = +1
Query: 10 KSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPL 189
KS+ S V+R + +A+ V+ M VW P+N K +ET SYLP L
Sbjct: 30 KSNASFPVSRKTNLDITSIASNGGRVRC-----------MQVWPPINMKKYETLSYLPDL 78
Query: 190 SDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
S EQ+ ++++Y++ NGW+PCLEF E++ +V E G YYD RYWTMWKL MF
Sbjct: 79 SSEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYREHTSSPG-----YYDGRYWTMWKLPMF 132
Score = 30.0 bits (66), Expect(2) = 3e-21
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV E+ + KA+PDA++R++
Sbjct: 130 PMFGCTDATQVAAEVQEAKKAYPDAHIRII 159
[97][TOP]
>UniRef100_A9TVU8 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9TVU8_PHYPA
Length = 176
Score = 90.5 bits (223), Expect(2) = 3e-21
Identities = 51/128 (39%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Frame = +1
Query: 7 AKSSVSAAVARPARSSVRPMAALKPAV----KAAPVAAPAQANQ---MMVWTPVNNKMFE 165
A ++ S+ ++ +S + LK A KA +++ ++ M VW P+ FE
Sbjct: 10 AFAAASSGLSTSQSTSAKAFTGLKSATLFPSKAQTLSSVQNGSRVQCMQVWNPIGQTKFE 69
Query: 166 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 345
TFSYLPPLSD+ IA QV+Y++ IPCLEF S+ R + S YYD RYW
Sbjct: 70 TFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSN-------GVSRVNNSSPGYYDGRYW 122
Query: 346 TMWKLXMF 369
TMWKL MF
Sbjct: 123 TMWKLPMF 130
Score = 34.7 bits (78), Expect(2) = 3e-21
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVLREI +C K FP YVR++
Sbjct: 128 PMFGCQDSAQVLREIEECKKTFPGCYVRVL 157
[98][TOP]
>UniRef100_Q43110 Ribulose bisphosphate carboxylase small chain n=1 Tax=Pteris
vittata RepID=Q43110_PTEVI
Length = 174
Score = 93.2 bits (230), Expect(2) = 3e-21
Identities = 55/131 (41%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Frame = +1
Query: 1 VIAKSSVSA-AVARPARSSVRPMAALKPAVKAAPVAAPAQA-------NQMMVWTPVNNK 156
++A +VSA + A A S + + LK AP A A + M+VW P +NK
Sbjct: 4 MLAAMAVSAPSCAAAAESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNK 63
Query: 157 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 336
FET SYLPPL+++QIA QV+Y+V GW PC+EF Y R YYD
Sbjct: 64 KFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGSVY-------REHFHGSGYYDG 116
Query: 337 RYWTMWKLXMF 369
RYW MWKL MF
Sbjct: 117 RYWIMWKLPMF 127
Score = 32.0 bits (71), Expect(2) = 3e-21
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKAE 466
P C + VLREI +C K +P A++R++ A+
Sbjct: 125 PMFGCTDSGSVLREIAECAKEYPTAFIRVLGFDAK 159
[99][TOP]
>UniRef100_B9T1N0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ricinus
communis RepID=B9T1N0_RICCO
Length = 185
Score = 93.2 bits (230), Expect(2) = 4e-21
Identities = 54/124 (43%), Positives = 68/124 (54%), Gaps = 12/124 (9%)
Frame = +1
Query: 34 ARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ------MMVWTPVNNKMFETFSY 177
A PA++S V P LK P + AN M VW P+ K FET SY
Sbjct: 17 ASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCMQVWPPLGKKKFETLSY 76
Query: 178 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 357
LP L+ EQ+A +V+Y++ GW+PCLEF E + +V E+A G YYD RYWTMWK
Sbjct: 77 LPDLTREQLAKEVEYLLRKGWVPCLEF-ELEHGFVYRENARSPG-----YYDGRYWTMWK 130
Query: 358 LXMF 369
L MF
Sbjct: 131 LPMF 134
Score = 31.6 bits (70), Expect(2) = 4e-21
Identities = 11/30 (36%), Positives = 22/30 (73%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + +QVL+E+ + KA+P+++VR++
Sbjct: 132 PMFGCSDAVQVLKELDEAIKAYPNSFVRII 161
[100][TOP]
>UniRef100_Q9SEB9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Lactuca
sativa RepID=Q9SEB9_LACSA
Length = 181
Score = 93.2 bits (230), Expect(2) = 4e-21
Identities = 58/134 (43%), Positives = 73/134 (54%), Gaps = 15/134 (11%)
Frame = +1
Query: 13 SSVSAAVAR--PARSSVR-PMAALKPAVKAAPVAAPA------------QANQMMVWTPV 147
SS A V R PA++S+ P LK V A PV A + M VW P+
Sbjct: 6 SSAVATVNRSTPAQASLAAPFTGLKSNV-AFPVTKKANNDFSSLPSNGGRVQCMKVWPPI 64
Query: 148 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 327
K +ET SYLPPLSDE ++ ++DY++ N W+PCLEF E + +V E G Y
Sbjct: 65 GLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEF-ELEHGFVYREHHHSPG-----Y 118
Query: 328 YDNRYWTMWKLXMF 369
YD RYWTMWKL MF
Sbjct: 119 YDGRYWTMWKLPMF 132
Score = 31.6 bits (70), Expect(2) = 4e-21
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV++E+ +C K +P+A++R++
Sbjct: 130 PMFGCTDSAQVMKEVGECKKEYPNAFIRVI 159
[101][TOP]
>UniRef100_A9RJ57 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9RJ57_PHYPA
Length = 181
Score = 91.7 bits (226), Expect(2) = 4e-21
Identities = 51/128 (39%), Positives = 70/128 (54%), Gaps = 7/128 (5%)
Frame = +1
Query: 7 AKSSVSAAVARPARSSVRPMAALKPAV-------KAAPVAAPAQANQMMVWTPVNNKMFE 165
A ++ S A + ++V+ + LK A ++ V ++ M VW P+ FE
Sbjct: 15 AFAAASPAASTSGSTTVKAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFE 74
Query: 166 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 345
TFSYLPPLSD+ IA QV+Y++ IPCLEF ++ +N S S YYD RYW
Sbjct: 75 TFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNANGVSRTNNS-------SPGYYDGRYW 127
Query: 346 TMWKLXMF 369
TMWKL MF
Sbjct: 128 TMWKLPMF 135
Score = 33.1 bits (74), Expect(2) = 4e-21
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVLREI +C K FP +VR++
Sbjct: 133 PMFGCQDSAQVLREIEECKKTFPGCFVRVL 162
[102][TOP]
>UniRef100_O24574 Ribulose bisphosphate carboxylase small chain n=1 Tax=Zea mays
RepID=O24574_MAIZE
Length = 170
Score = 98.6 bits (244), Expect(2) = 4e-21
Identities = 51/123 (41%), Positives = 67/123 (54%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
++A S+ + A + +S+ A + V+ + M VW NK FET SYL
Sbjct: 6 MMASSATAVAPFQGLKSAASLPVARRSTRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYL 65
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS + + QVDY++ NGWIPCLEF++ Y N S S YYD RYWTMWKL
Sbjct: 66 PPLSTDDLLKQVDYLLRNGWIPCLEFSKLGFVYREN-------STSPCYYDGRYWTMWKL 118
Query: 361 XMF 369
MF
Sbjct: 119 PMF 121
Score = 26.2 bits (56), Expect(2) = 4e-21
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV +E+ + A+PDA+ R++
Sbjct: 119 PMFGCTDATQVYKELQEAIAAYPDAFHRVI 148
[103][TOP]
>UniRef100_O65349 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Capsicum annuum RepID=RBS_CAPAN
Length = 187
Score = 94.4 bits (233), Expect(2) = 6e-21
Identities = 42/81 (51%), Positives = 55/81 (67%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M+VW P+N K +ET SYLP LSDEQ+ +++Y++ GW+PCLEF E++ +V E
Sbjct: 58 MLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEF-ETEHGFVYREHHRSP 116
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 117 G-----YYDGRYWTMWKLPMF 132
Score = 30.0 bits (66), Expect(2) = 6e-21
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + KA+P A++R++
Sbjct: 130 PMFGCTDATQVLNEVQEAKKAYPQAWIRII 159
[104][TOP]
>UniRef100_Q6RWD8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Capsicum
annuum RepID=Q6RWD8_CAPAN
Length = 180
Score = 94.4 bits (233), Expect(2) = 6e-21
Identities = 42/81 (51%), Positives = 55/81 (67%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M+VW P+N K +ET SYLP LSDEQ+ +++Y++ GW+PCLEF E++ +V E
Sbjct: 58 MLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEF-ETEHGFVYREHHRSP 116
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 117 G-----YYDGRYWTMWKLPMF 132
Score = 30.0 bits (66), Expect(2) = 6e-21
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + KA+P A++R++
Sbjct: 130 PMFGCTDATQVLNEVQEAKKAYPQAWIRII 159
[105][TOP]
>UniRef100_O48550 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Zantedeschia aethiopica RepID=RBS_ZANAE
Length = 178
Score = 91.7 bits (226), Expect(2) = 6e-21
Identities = 42/81 (51%), Positives = 50/81 (61%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P K FET SYLPPL+ EQ+ +VDY++ NGWIPC+EF + Y +
Sbjct: 57 MQVWPPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHN---- 112
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
S YYD RYWTMWKL MF
Sbjct: 113 ---SPGYYDGRYWTMWKLPMF 130
Score = 32.7 bits (73), Expect(2) = 6e-21
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C+KA+PD + R++
Sbjct: 128 PMFGCTDSSQVLKEVDECSKAYPDYFNRII 157
[106][TOP]
>UniRef100_P18960 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Silene latifolia subsp. alba RepID=RBS_SILPR
Length = 177
Score = 90.1 bits (222), Expect(2) = 6e-21
Identities = 52/135 (38%), Positives = 74/135 (54%), Gaps = 12/135 (8%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPA------------QANQMMVWTP 144
+++ ++V A + V P + LK + A PV+ + + N M VW P
Sbjct: 4 LMSNAAVVTASTAAQANMVAPFSGLK-STSAFPVSRKSNVDITSLATNGGRVNCMQVWPP 62
Query: 145 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 324
N K FET SYLP LS+E + +++Y++ GW+PCLEF E A+V E+ + S
Sbjct: 63 RNLKKFETLSYLPTLSEESLLKEINYLLIKGWVPCLEF-EVGPAHVYREN-----NKSPG 116
Query: 325 YYDNRYWTMWKLXMF 369
YYD RYWTMWKL MF
Sbjct: 117 YYDGRYWTMWKLPMF 131
Score = 34.3 bits (77), Expect(2) = 6e-21
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV E+V+C A+PDA+VR++
Sbjct: 129 PMFGCTDASQVAAEVVECKNAYPDAHVRII 158
[107][TOP]
>UniRef100_B6RHQ5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Miscanthus x giganteus RepID=B6RHQ5_9POAL
Length = 121
Score = 95.5 bits (236), Expect(2) = 6e-21
Identities = 43/79 (54%), Positives = 51/79 (64%)
Frame = +1
Query: 133 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 312
VW NK FET SYLPPL++EQ+ QVDY++ N W+PCLEF++ Y N S
Sbjct: 1 VWPAYGNKKFETLSYLPPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------S 53
Query: 313 VSCLYYDNRYWTMWKLXMF 369
S YYD RYWTMWKL MF
Sbjct: 54 TSPCYYDGRYWTMWKLPMF 72
Score = 28.9 bits (63), Expect(2) = 6e-21
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV +E+ + ++PDAYVR++
Sbjct: 70 PMFGCTDASQVYKELQEAIASYPDAYVRIL 99
[108][TOP]
>UniRef100_A9NXP2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea
sitchensis RepID=A9NXP2_PICSI
Length = 188
Score = 91.7 bits (226), Expect(2) = 8e-21
Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 16/135 (11%)
Frame = +1
Query: 13 SSVSAAVARPARSSVRPMAALKPAV---KAAPVAAPAQ-------------ANQMMVWTP 144
SS +A P ++ V+ +A+ A+ K+ A A+ + M VW P
Sbjct: 11 SSTAALTTMPRKNGVQSLASSVSALNNLKSGSAAFSAKLEWEEKTTTNGSRVHCMQVWPP 70
Query: 145 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 324
+NN+ +ET SYLPPLS E + ++DY+++ GW+PCLEF + +N G +
Sbjct: 71 INNRKYETLSYLPPLSQESLVKEIDYMISKGWVPCLEFDAVGQIQRTN------GVMVPG 124
Query: 325 YYDNRYWTMWKLXMF 369
YYD RYW++WKL MF
Sbjct: 125 YYDGRYWSLWKLPMF 139
Score = 32.3 bits (72), Expect(2) = 8e-21
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVR 445
P C QVL E+ +C KA+P+AY+R
Sbjct: 137 PMFGCTNSAQVLSELEECKKAYPNAYIR 164
[109][TOP]
>UniRef100_A9S8M9 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9S8M9_PHYPA
Length = 182
Score = 91.7 bits (226), Expect(2) = 8e-21
Identities = 53/128 (41%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Frame = +1
Query: 7 AKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ-------MMVWTPVNNKMFE 165
A + S+ V+ +SV+ + LK A + A + Q M VW P+ FE
Sbjct: 16 AFGAASSGVSTSEATSVKAFSGLKSATLFSGNAQTLSSVQNGSRVQCMQVWNPIGMTKFE 75
Query: 166 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 345
TFSYLPPLSD+ IA QV+Y++ IPCLEF S+ R + S YYD RYW
Sbjct: 76 TFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSN-------GVSRVNNSSPGYYDGRYW 128
Query: 346 TMWKLXMF 369
TMWKL MF
Sbjct: 129 TMWKLPMF 136
Score = 32.3 bits (72), Expect(2) = 8e-21
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVLREI +C FP YVR++
Sbjct: 134 PMFGCQDSAQVLREIEECKTTFPGCYVRVL 163
[110][TOP]
>UniRef100_A9S8M6 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9S8M6_PHYPA
Length = 182
Score = 91.7 bits (226), Expect(2) = 8e-21
Identities = 53/128 (41%), Positives = 68/128 (53%), Gaps = 7/128 (5%)
Frame = +1
Query: 7 AKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ-------MMVWTPVNNKMFE 165
A + S+ V+ +SV+ + LK A + A + Q M VW P+ FE
Sbjct: 16 AFGAASSGVSTSEATSVKAFSGLKSATLFSGNAQTLSSVQNGSRVQCMQVWNPIGMTKFE 75
Query: 166 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 345
TFSYLPPLSD+ IA QV+Y++ IPCLEF S+ R + S YYD RYW
Sbjct: 76 TFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSN-------GVSRVNNSSPGYYDGRYW 128
Query: 346 TMWKLXMF 369
TMWKL MF
Sbjct: 129 TMWKLPMF 136
Score = 32.3 bits (72), Expect(2) = 8e-21
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVLREI +C FP YVR++
Sbjct: 134 PMFGCQDSAQVLREIEECKTTFPGCYVRVL 163
[111][TOP]
>UniRef100_A9YTZ9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Solanum
tuberosum RepID=A9YTZ9_SOLTU
Length = 181
Score = 92.0 bits (227), Expect(2) = 8e-21
Identities = 42/81 (51%), Positives = 53/81 (65%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ V E
Sbjct: 59 MQVWPPINTKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGIVYREKHKSP 117
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYW MWKL MF
Sbjct: 118 G-----YYDGRYWNMWKLPMF 133
Score = 32.0 bits (71), Expect(2) = 8e-21
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ +C K++P A++R++
Sbjct: 131 PMFGCTDATQVLAEVQECKKSYPQAWIRII 160
[112][TOP]
>UniRef100_P10797 Ribulose bisphosphate carboxylase small chain 2B, chloroplastic n=1
Tax=Arabidopsis thaliana RepID=RBS2B_ARATH
Length = 181
Score = 91.7 bits (226), Expect(2) = 8e-21
Identities = 54/131 (41%), Positives = 72/131 (54%), Gaps = 13/131 (9%)
Frame = +1
Query: 16 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 156
S +A V PA+++ V P LK + + PV A + + M VW P+ K
Sbjct: 7 SSTAVVTSPAQATMVAPFTGLKSSA-SFPVTRKANNDITSITSNGGRVSCMKVWPPIGKK 65
Query: 157 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 336
FET SYLP LSD ++A +VDY++ N WIPC+EF E + +V E G YYD
Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG-----YYDG 119
Query: 337 RYWTMWKLXMF 369
RYWTMWKL +F
Sbjct: 120 RYWTMWKLPLF 130
Score = 32.3 bits (72), Expect(2) = 8e-21
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C K +P A++R++
Sbjct: 128 PLFGCTDSAQVLKEVEECKKEYPGAFIRII 157
[113][TOP]
>UniRef100_Q9XGX5 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1
Tax=Amaranthus hypochondriacus RepID=RBS2_AMAHP
Length = 184
Score = 90.5 bits (223), Expect(2) = 1e-20
Identities = 44/81 (54%), Positives = 52/81 (64%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW PV K FET SYLPPLSD Q+ AQV Y++ GWIPC+EF E + +V E+
Sbjct: 61 MQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEF-ELEHPFVYRENHRSP 119
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G Y D RYWTMWKL M+
Sbjct: 120 G-----YQDGRYWTMWKLPMY 135
Score = 33.1 bits (74), Expect(2) = 1e-20
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C +P QVL E+ + KA+P A++R++
Sbjct: 133 PMYGCTDPAQVLNEVEEAKKAYPTAFIRII 162
[114][TOP]
>UniRef100_Q40250 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Lactuca sativa RepID=RBS_LACSA
Length = 181
Score = 92.0 bits (227), Expect(2) = 1e-20
Identities = 43/81 (53%), Positives = 53/81 (65%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+ K +ET SYLPPLSDE ++ ++DY++ N WIPCLEF E + +V E
Sbjct: 58 MKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEF-ELEHGFVYREHHHSP 116
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 117 G-----YYDGRYWTMWKLPMF 132
Score = 31.6 bits (70), Expect(2) = 1e-20
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV++E+ +C K +P+A++R++
Sbjct: 130 PMFGCTDSAQVMKEVGECKKEYPNAFIRVI 159
[115][TOP]
>UniRef100_P10798 Ribulose bisphosphate carboxylase small chain 3B, chloroplastic n=1
Tax=Arabidopsis thaliana RepID=RBS3B_ARATH
Length = 181
Score = 91.3 bits (225), Expect(2) = 1e-20
Identities = 54/131 (41%), Positives = 71/131 (54%), Gaps = 13/131 (9%)
Frame = +1
Query: 16 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 156
S +A V PA+++ V P LK + A PV + + M VW P+ K
Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKK 65
Query: 157 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 336
FET SYLP LSD ++A +VDY++ N WIPC+EF E + +V E G YYD
Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG-----YYDG 119
Query: 337 RYWTMWKLXMF 369
RYWTMWKL +F
Sbjct: 120 RYWTMWKLPLF 130
Score = 32.3 bits (72), Expect(2) = 1e-20
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C K +P A++R++
Sbjct: 128 PLFGCTDSAQVLKEVEECKKEYPGAFIRII 157
[116][TOP]
>UniRef100_P26573 Ribulose bisphosphate carboxylase small chain 8B, chloroplastic n=1
Tax=Nicotiana plumbaginifolia RepID=RBS8_NICPL
Length = 180
Score = 93.6 bits (231), Expect(2) = 1e-20
Identities = 41/81 (50%), Positives = 56/81 (69%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+N K +ET SYLP LS EQ+ ++++Y++ +GW+PCLEF E+++ +V E
Sbjct: 58 MQVWPPINKKKYETLSYLPDLSQEQLLSEIEYLLKSGWVPCLEF-ETERGFVYREHHHSP 116
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 117 G-----YYDGRYWTMWKLPMF 132
Score = 30.0 bits (66), Expect(2) = 1e-20
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + KA+P A+VR++
Sbjct: 130 PMFGCTDATQVLAEVEEAKKAYPQAWVRII 159
[117][TOP]
>UniRef100_P19308 Ribulose bisphosphate carboxylase small chain SSU26, chloroplastic
n=1 Tax=Lemna gibba RepID=RBS2_LEMGI
Length = 177
Score = 95.5 bits (236), Expect(2) = 1e-20
Identities = 58/131 (44%), Positives = 72/131 (54%), Gaps = 15/131 (11%)
Frame = +1
Query: 22 SAAVAR--PARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMVWTPVNNK 156
+AAVAR PA+S+ V P L+ +V A P A N M VW P K
Sbjct: 9 TAAVARAGPAQSNMVAPFNGLRSSV-AFPATRKANKNLSTLPSNGGKVSCMQVWPPEGLK 67
Query: 157 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 336
FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + S YYD
Sbjct: 68 KFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA-------SPGYYDG 120
Query: 337 RYWTMWKLXMF 369
RYWTMWKL MF
Sbjct: 121 RYWTMWKLPMF 131
Score = 28.1 bits (61), Expect(2) = 1e-20
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV+ E+ + KA+P+ +VR++
Sbjct: 129 PMFGCTDASQVIAEVEEAKKAYPEYFVRII 158
[118][TOP]
>UniRef100_P10647 Ribulose bisphosphate carboxylase small chain C, chloroplastic n=1
Tax=Solanum tuberosum RepID=RBS0_SOLTU
Length = 181
Score = 95.9 bits (237), Expect(2) = 1e-20
Identities = 44/81 (54%), Positives = 55/81 (67%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E
Sbjct: 59 MQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYREHNSSP 117
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 118 G-----YYDGRYWTMWKLPMF 133
Score = 27.3 bits (59), Expect(2) = 1e-20
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + A+P A++R++
Sbjct: 131 PMFGCTDGTQVLAEVQEAKNAYPQAWIRII 160
[119][TOP]
>UniRef100_Q84QE5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nicotiana
tabacum RepID=Q84QE5_TOBAC
Length = 180
Score = 93.2 bits (230), Expect(2) = 1e-20
Identities = 41/81 (50%), Positives = 57/81 (70%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P K +ET SYLP LS+EQ+ ++++Y++ NGW+PCLEF E+++ +V E+
Sbjct: 58 MQVWPPYGKKKYETLSYLPDLSEEQLLSEIEYLLKNGWVPCLEF-ETERGFVYREN---- 112
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
+ S YYD RYWTMWKL MF
Sbjct: 113 -NKSPGYYDGRYWTMWKLPMF 132
Score = 30.0 bits (66), Expect(2) = 1e-20
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + KA+P+A++R++
Sbjct: 130 PMFGCTDATQVLAEVGEAKKAYPEAWIRII 159
[120][TOP]
>UniRef100_B9T055 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ricinus
communis RepID=B9T055_RICCO
Length = 180
Score = 93.2 bits (230), Expect(2) = 1e-20
Identities = 54/135 (40%), Positives = 69/135 (51%), Gaps = 12/135 (8%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQMMVWTP 144
++ + S A P S V P LK + PV + + M VW P
Sbjct: 5 IVPSTMASLNRAAPQASMVAPFTGLKSS-SVFPVTRKQNNDITTLASNGGKVHCMQVWPP 63
Query: 145 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 324
V K FET SYLPPLS+E +A +VDY++ GW+PCLEF E + +V E+ G
Sbjct: 64 VGKKKFETLSYLPPLSEESLAKEVDYLLRMGWVPCLEF-ELEHGFVYRENHRSPG----- 117
Query: 325 YYDNRYWTMWKLXMF 369
YYD R WTMWKL MF
Sbjct: 118 YYDGRCWTMWKLPMF 132
Score = 30.0 bits (66), Expect(2) = 1e-20
Identities = 10/30 (33%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + KA+P++++R++
Sbjct: 130 PMFGCTDSSQVLKELEEAKKAYPNSFIRII 159
[121][TOP]
>UniRef100_P19311 Ribulose bisphosphate carboxylase small chain SSU5A, chloroplastic
n=1 Tax=Lemna gibba RepID=RBS5_LEMGI
Length = 177
Score = 95.1 bits (235), Expect(2) = 1e-20
Identities = 58/131 (44%), Positives = 73/131 (55%), Gaps = 15/131 (11%)
Frame = +1
Query: 22 SAAVAR--PARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 156
+AAVAR PA+SS V P L+ +V A P A + + M VW P K
Sbjct: 9 TAAVARAGPAQSSMVAPFNGLRSSV-AFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLK 67
Query: 157 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 336
FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + S YYD
Sbjct: 68 KFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA-------SPGYYDG 120
Query: 337 RYWTMWKLXMF 369
RYWTMWKL MF
Sbjct: 121 RYWTMWKLPMF 131
Score = 28.1 bits (61), Expect(2) = 1e-20
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV+ E+ + KA+P+ +VR++
Sbjct: 129 PMFGCTDASQVIAEVEEAKKAYPEYFVRII 158
[122][TOP]
>UniRef100_P10796 Ribulose bisphosphate carboxylase small chain 1B, chloroplastic n=1
Tax=Arabidopsis thaliana RepID=RBS1B_ARATH
Length = 181
Score = 90.5 bits (223), Expect(2) = 2e-20
Identities = 53/131 (40%), Positives = 72/131 (54%), Gaps = 13/131 (9%)
Frame = +1
Query: 16 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 156
S +A V PA+++ V P LK + + PV A + + M VW P+ K
Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-SFPVTRKANNDITSITSNGGRVSCMKVWPPIGKK 65
Query: 157 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 336
FET SYLP L+D ++A +VDY++ N WIPC+EF E + +V E G YYD
Sbjct: 66 KFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG-----YYDG 119
Query: 337 RYWTMWKLXMF 369
RYWTMWKL +F
Sbjct: 120 RYWTMWKLPLF 130
Score = 32.3 bits (72), Expect(2) = 2e-20
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C K +P A++R++
Sbjct: 128 PLFGCTDSAQVLKEVEECKKEYPGAFIRII 157
[123][TOP]
>UniRef100_P17673 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Trifolium repens RepID=RBS_TRIRP
Length = 178
Score = 94.0 bits (232), Expect(2) = 2e-20
Identities = 42/86 (48%), Positives = 57/86 (66%)
Frame = +1
Query: 112 AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNE 291
++ N M VW PV K FET SYLPPL+DEQ+ +V+Y++ GW+PC+EF E +K +V +
Sbjct: 51 SRVNCMQVWPPVGKKKFETLSYLPPLTDEQLLKEVEYLLRKGWVPCVEF-ELEKGFVHRQ 109
Query: 292 SAIRFGSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMW+L +F
Sbjct: 110 YNSSPG-----YYDGRYWTMWRLPLF 130
Score = 28.9 bits (63), Expect(2) = 2e-20
Identities = 8/21 (38%), Positives = 17/21 (80%)
Frame = +2
Query: 389 QVLREIVDCTKAFPDAYVRLV 451
QVL+E+ +C +P+A++R++
Sbjct: 137 QVLKEVAECKAEYPEAFIRII 157
[124][TOP]
>UniRef100_Q5I8Y4 Ribulose bisphosphate carboxylase small chain n=1
Tax=Ammopiptanthus mongolicus RepID=Q5I8Y4_9FABA
Length = 174
Score = 90.5 bits (223), Expect(2) = 2e-20
Identities = 42/81 (51%), Positives = 53/81 (65%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M+VW P+ K FET SYLPPLS E + +V+Y++ GW+PCLEF E + +V E+
Sbjct: 50 MLVWPPLGRKKFETLSYLPPLSIESLTKEVEYLLRKGWVPCLEF-ELEHGFVYRENNRSP 108
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 109 G-----YYDGRYWTMWKLPMF 124
Score = 32.3 bits (72), Expect(2) = 2e-20
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV++E+ +C K +P A+VR++
Sbjct: 122 PMFGCSDASQVMKELEECKKEYPTAFVRII 151
[125][TOP]
>UniRef100_B7ZYT6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Zea mays
RepID=B7ZYT6_MAIZE
Length = 153
Score = 96.7 bits (239), Expect(2) = 2e-20
Identities = 45/82 (54%), Positives = 52/82 (63%)
Frame = +1
Query: 124 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 303
+M VW NK FET SYLPPLS + + QVDY++ NGWIPCLEF++ Y N
Sbjct: 30 RMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFSKLGFVYREN----- 84
Query: 304 FGSVSCLYYDNRYWTMWKLXMF 369
S S YYD RYWTMWKL MF
Sbjct: 85 --STSPCYYDGRYWTMWKLPMF 104
Score = 26.2 bits (56), Expect(2) = 2e-20
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV +E+ + A+PDA+ R++
Sbjct: 102 PMFGCTDATQVYKELQEAIAAYPDAFHRVI 131
[126][TOP]
>UniRef100_A9TWX2 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9TWX2_PHYPA
Length = 182
Score = 90.5 bits (223), Expect(2) = 2e-20
Identities = 51/126 (40%), Positives = 70/126 (55%), Gaps = 7/126 (5%)
Frame = +1
Query: 13 SSVSAAVARPARSSVRPMAALK-------PAVKAAPVAAPAQANQMMVWTPVNNKMFETF 171
++ S++VA +V+ LK + K + V ++ M VW P+ FETF
Sbjct: 17 AAASSSVASSDSVTVKASTCLKGPTFFASKSQKLSSVQNGSRVQCMQVWNPIGMTKFETF 76
Query: 172 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 351
SYLPPLSDE IA QV+Y++ IPCLEF ++++ R + S YYD RYWTM
Sbjct: 77 SYLPPLSDEAIAKQVEYMIQQKLIPCLEFD------LNSKGVSRDNNSSPGYYDGRYWTM 130
Query: 352 WKLXMF 369
WKL MF
Sbjct: 131 WKLPMF 136
Score = 32.0 bits (71), Expect(2) = 2e-20
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVLREI +C FP+ +VR++
Sbjct: 134 PMFGCNDSAQVLREIQECKTTFPNCWVRVL 163
[127][TOP]
>UniRef100_C1JZ18 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Ageratina adenophora RepID=C1JZ18_9ASTR
Length = 178
Score = 90.1 bits (222), Expect(2) = 3e-20
Identities = 55/133 (41%), Positives = 74/133 (55%), Gaps = 11/133 (8%)
Frame = +1
Query: 4 IAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTPVN 150
I+ S + + A PA+++ V P LK PA K A + N M VW P+
Sbjct: 4 ISSSVATVSRAAPAQANMVAPFTGLKSNAAFPATKKANDFSTLPNNGGRVQCMKVWPPLG 63
Query: 151 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 330
K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E A G YY
Sbjct: 64 LKKYETLSYLPTLTETQLAKEVDYLLRNKWVPCLEF-ELEHGFVYREHARSPG-----YY 117
Query: 331 DNRYWTMWKLXMF 369
D R+WTMWKL MF
Sbjct: 118 DGRHWTMWKLPMF 130
Score = 32.0 bits (71), Expect(2) = 3e-20
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C K +P A++R++
Sbjct: 128 PMFGCTDSAQVLKEVGECKKEYPQAWIRII 157
[128][TOP]
>UniRef100_Q96360 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Betula pendula RepID=Q96360_BETVE
Length = 110
Score = 87.0 bits (214), Expect(2) = 3e-20
Identities = 44/81 (54%), Positives = 51/81 (62%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+ K FET SYLPPLS EQ+A +VDY++ IPCLEF E + +V E
Sbjct: 4 MQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEF-ELEHGFVYREHNRSP 62
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 63 G-----YYDGRYWTMWKLPMF 78
Score = 35.0 bits (79), Expect(2) = 3e-20
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C KA+P A++R++
Sbjct: 76 PMFGCNDSSQVLKELEECKKAYPSAFIRII 105
[129][TOP]
>UniRef100_Q02980 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Malus sp. RepID=RBS_MALSP
Length = 183
Score = 92.0 bits (227), Expect(2) = 4e-20
Identities = 55/131 (41%), Positives = 72/131 (54%), Gaps = 12/131 (9%)
Frame = +1
Query: 13 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA-----------QANQMMVWTPVNNK 156
++VSA PA++ V P LK + A+PV + + M VW P+ K
Sbjct: 12 ATVSADRPAPAQARMVAPFTGLKSS-SASPVTRKSNDITSIASNGGRVQCMQVWPPLGLK 70
Query: 157 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 336
FET SYLPPLS E +A +VDY++ W+PCLEF E + +V E+ G YYD
Sbjct: 71 KFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEF-ELEHGFVYRENHRSPG-----YYDG 124
Query: 337 RYWTMWKLXMF 369
RYWTMWKL MF
Sbjct: 125 RYWTMWKLPMF 135
Score = 29.6 bits (65), Expect(2) = 4e-20
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + KA+P +++R++
Sbjct: 133 PMFGCTDSSQVLKELEEAKKAYPQSFIRII 162
[130][TOP]
>UniRef100_A7LIT5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Corchorus
olitorius RepID=A7LIT5_9ROSI
Length = 183
Score = 88.6 bits (218), Expect(2) = 4e-20
Identities = 43/81 (53%), Positives = 52/81 (64%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+ K FET SYLP L+ Q+A +VDY++ +GWIPCLEF E + +V E
Sbjct: 58 MQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSGWIPCLEF-ELEHGFVYREHHHSP 116
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 117 G-----YYDGRYWTMWKLPMF 132
Score = 33.1 bits (74), Expect(2) = 4e-20
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + KA+PDA++R++
Sbjct: 130 PMFGCTDSSQVLKELEEAKKAYPDAFIRII 159
[131][TOP]
>UniRef100_Q43115 Ribulose bisphosphate carboxylase small chain n=1 Tax=Malus x
domestica x Pyrus communis RepID=Q43115_9ROSA
Length = 179
Score = 92.0 bits (227), Expect(2) = 4e-20
Identities = 55/131 (41%), Positives = 70/131 (53%), Gaps = 12/131 (9%)
Frame = +1
Query: 13 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA-----------QANQMMVWTPVNNK 156
S A V+ PA++ V P LK + A PV + + M VW P+ K
Sbjct: 8 SGTVATVSAPAQARMVAPFTGLKSS-SAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLK 66
Query: 157 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 336
FET SYLPPLS E +A +VDY++ W+PCLEF E + +V E+ G YYD
Sbjct: 67 KFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEF-ELEHGFVYRENNRSPG-----YYDG 120
Query: 337 RYWTMWKLXMF 369
RYWTMWKL MF
Sbjct: 121 RYWTMWKLPMF 131
Score = 29.6 bits (65), Expect(2) = 4e-20
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + KA+P +++R++
Sbjct: 129 PMFGCTDSSQVLKELEEAKKAYPQSFIRII 158
[132][TOP]
>UniRef100_Q9SXH1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Physcomitrella patens RepID=Q9SXH1_PHYPA
Length = 214
Score = 100 bits (250), Expect = 4e-20
Identities = 61/164 (37%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Frame = +1
Query: 4 IAKSSVSAAVARPARSS-VRPMAALKPAV-------KAAPVAAPAQANQMMVWTPVNNKM 159
+A S+ V P+ SS V+ + LK A K + V ++ M VW P+
Sbjct: 43 VALGGASSCVGAPSESSSVKAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPK 102
Query: 160 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 339
FETFSYLPPL+D+QIA QVDY++ IPC+EF +N S G+ S YYD R
Sbjct: 103 FETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFS----GAGSSGYYDGR 158
Query: 340 YWTMWKLXMFVLR*THAGAARDRRLHQGLPRCLRAPGGFESRSR 471
YWTMWKL MF + + P C GF+S+ +
Sbjct: 159 YWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQ 202
[133][TOP]
>UniRef100_A9PJN7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus
trichocarpa x Populus deltoides RepID=A9PJN7_9ROSI
Length = 189
Score = 91.7 bits (226), Expect(2) = 5e-20
Identities = 55/136 (40%), Positives = 74/136 (54%), Gaps = 13/136 (9%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWT 141
VI+ ++V+ PA+++ V P LK + A PV A + M VW
Sbjct: 5 VISSAAVATVNRTPAQANMVAPFNGLK-STSAFPVTRKANNDITSIASNGGRVQCMQVWP 63
Query: 142 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 321
P K FET SYLP L+ EQ+A +++Y++ N W+PCLEF E +K +V E G
Sbjct: 64 PTGLKKFETLSYLPDLTTEQLAREIEYLLRNKWVPCLEF-ELEKGWVYREHHQSPG---- 118
Query: 322 LYYDNRYWTMWKLXMF 369
YYD RYWTMWKL MF
Sbjct: 119 -YYDGRYWTMWKLPMF 133
Score = 29.6 bits (65), Expect(2) = 5e-20
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ + KA+P+++VR++
Sbjct: 131 PMFGCTEASQVLIELEEAKKAYPNSFVRII 160
[134][TOP]
>UniRef100_A9PG69 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus
trichocarpa RepID=A9PG69_POPTR
Length = 182
Score = 90.5 bits (223), Expect(2) = 5e-20
Identities = 55/137 (40%), Positives = 77/137 (56%), Gaps = 14/137 (10%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ-------------MMVW 138
+I+ ++V+ PA+++ V P LK A A PV+ +AN M VW
Sbjct: 6 MISSAAVATVNRTPAQANMVAPFNGLKSAA-AFPVST-RKANDITSIASNGGRVQCMQVW 63
Query: 139 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 318
P K FET SYLP L++E++A ++DY++ + W+PCLEF E +K +V E G
Sbjct: 64 PPTGLKKFETLSYLPDLTEEELAKEIDYLLRSKWVPCLEF-ELEKGWVYREHHSSPG--- 119
Query: 319 CLYYDNRYWTMWKLXMF 369
YYD RYWTMWKL MF
Sbjct: 120 --YYDGRYWTMWKLPMF 134
Score = 30.8 bits (68), Expect(2) = 5e-20
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ + KA+P+A++R++
Sbjct: 132 PMFGCTEASQVLLELEEAKKAYPNAFIRII 161
[135][TOP]
>UniRef100_A9PJL4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus
trichocarpa x Populus deltoides RepID=A9PJL4_9ROSI
Length = 181
Score = 91.7 bits (226), Expect(2) = 5e-20
Identities = 55/136 (40%), Positives = 74/136 (54%), Gaps = 13/136 (9%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWT 141
VI+ ++V+ PA+++ V P LK + A PV A + M VW
Sbjct: 5 VISSAAVATVNRTPAQANMVAPFNGLK-STSAFPVTRKANNDITSIASNGGRVQCMQVWP 63
Query: 142 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 321
P K FET SYLP L+ EQ+A +++Y++ N W+PCLEF E +K +V E G
Sbjct: 64 PTGLKKFETLSYLPDLTTEQLAREIEYLLRNKWVPCLEF-ELEKGWVYREHHQSPG---- 118
Query: 322 LYYDNRYWTMWKLXMF 369
YYD RYWTMWKL MF
Sbjct: 119 -YYDGRYWTMWKLPMF 133
Score = 29.6 bits (65), Expect(2) = 5e-20
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ + KA+P+++VR++
Sbjct: 131 PMFGCTEASQVLIELEEAKKAYPNSFVRII 160
[136][TOP]
>UniRef100_Q8GRJ7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Coffea
arabica RepID=Q8GRJ7_COFAR
Length = 181
Score = 90.9 bits (224), Expect(2) = 5e-20
Identities = 55/132 (41%), Positives = 72/132 (54%), Gaps = 16/132 (12%)
Frame = +1
Query: 22 SAAVARPARSS------VRPMAALKPAV------KAAPVAAPA----QANQMMVWTPVNN 153
SAAVA R+S V P LK A K+ + + A + M VW P
Sbjct: 8 SAAVATTTRASPAQASMVAPFNGLKAASSFPISKKSVDITSLATNGGRVQCMQVWPPRGL 67
Query: 154 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 333
K +ET SYLP L+DEQ+ ++DY++ +GW+PCLEF E +K +V E G YYD
Sbjct: 68 KKYETLSYLPDLTDEQLLKEIDYLIRSGWVPCLEF-ELEKGFVYREYHRSPG-----YYD 121
Query: 334 NRYWTMWKLXMF 369
RYWTMWKL M+
Sbjct: 122 GRYWTMWKLPMY 133
Score = 30.4 bits (67), Expect(2) = 5e-20
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ +C K +P+ +VR++
Sbjct: 131 PMYGCTDATQVLNEVGECLKEYPNCWVRII 160
[137][TOP]
>UniRef100_P08135 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Raphanus sativus RepID=RBS_RAPSA
Length = 181
Score = 89.7 bits (221), Expect(2) = 5e-20
Identities = 49/120 (40%), Positives = 64/120 (53%)
Frame = +1
Query: 10 KSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPL 189
KSS + V R + + +A+ V M VW P+ K FET SYLP L
Sbjct: 28 KSSAAFPVTRKTNTDITSIASNGGRVSC-----------MKVWPPIGKKKFETLSYLPDL 76
Query: 190 SDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
SD ++A +VDY++ N WIPC+EF E + +V E G YYD RYWTMWKL +F
Sbjct: 77 SDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDGRYWTMWKLPLF 130
Score = 31.6 bits (70), Expect(2) = 5e-20
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C K +P+A +R++
Sbjct: 128 PLFGCTDSAQVLKEVQECKKEYPNALIRII 157
[138][TOP]
>UniRef100_Q5ZF97 Ribulose bisphosphate carboxylase small chain n=1 Tax=Plantago
major RepID=Q5ZF97_PLAMJ
Length = 177
Score = 90.5 bits (223), Expect(2) = 5e-20
Identities = 53/128 (41%), Positives = 70/128 (54%), Gaps = 9/128 (7%)
Frame = +1
Query: 13 SSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQ----ANQMMVWTPVNNKMFE 165
+S +A R + V P A LK PA + A A+ M VW P+ K +E
Sbjct: 8 TSSTAVAGRAQATMVAPYAGLKSTSVFPATRKTGNAKLARNAGKVRCMQVWPPLGKKKYE 67
Query: 166 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 345
T SYLP L+ EQ+A ++DY++ + WIPCLEF E + +V E+ G YYD RYW
Sbjct: 68 TLSYLPDLTVEQLAKEIDYLLRSKWIPCLEF-ELEHGFVYRENNRSPG-----YYDGRYW 121
Query: 346 TMWKLXMF 369
TMWKL MF
Sbjct: 122 TMWKLPMF 129
Score = 30.8 bits (68), Expect(2) = 5e-20
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV+ E+ +C K +P+A+VR++
Sbjct: 127 PMFGCTDASQVIAELEECKKEYPNAWVRII 156
[139][TOP]
>UniRef100_Q5ZF94 Ribulose bisphosphate carboxylase small chain n=1 Tax=Plantago
major RepID=Q5ZF94_PLAMJ
Length = 174
Score = 90.5 bits (223), Expect(2) = 5e-20
Identities = 53/125 (42%), Positives = 69/125 (55%), Gaps = 9/125 (7%)
Frame = +1
Query: 22 SAAVARPARSSVRPMAALK------PAVKAAPVAAPAQANQ---MMVWTPVNNKMFETFS 174
SAA S V + LK A K V++P+ + M VW P K +ET S
Sbjct: 8 SAATVTAQTSMVGQFSGLKFGSTFPIAKKTGRVSSPSSGLKVRCMQVWPPTGKKKYETLS 67
Query: 175 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 354
YLP L+ EQ+A ++DY++ + WIPCLEF E + +V E+A G YYD RYWTMW
Sbjct: 68 YLPDLTVEQLAKEIDYLLRSKWIPCLEF-ELEHGFVYRENARSPG-----YYDGRYWTMW 121
Query: 355 KLXMF 369
KL MF
Sbjct: 122 KLPMF 126
Score = 30.8 bits (68), Expect(2) = 5e-20
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV+ E+ +C K +P+A+VR++
Sbjct: 124 PMFGCTDASQVIAELEECKKEYPNAWVRII 153
[140][TOP]
>UniRef100_Q75WT7 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=Q75WT7_PHYPA
Length = 184
Score = 100 bits (249), Expect = 5e-20
Identities = 63/163 (38%), Positives = 83/163 (50%), Gaps = 7/163 (4%)
Frame = +1
Query: 4 IAKSSVSAAVARPARSSVRPMAALKPAV-------KAAPVAAPAQANQMMVWTPVNNKMF 162
+A SSV+A+ SSV+ + LK A + + V ++ M VW P+ F
Sbjct: 17 VASSSVAAS---RESSSVKAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKF 73
Query: 163 ETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRY 342
ETFSYLPPLSD+QIA QVDY++ IPC+EF +N S GS S YYD RY
Sbjct: 74 ETFSYLPPLSDDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFS----GSGSSGYYDGRY 129
Query: 343 WTMWKLXMFVLR*THAGAARDRRLHQGLPRCLRAPGGFESRSR 471
WTMWKL MF + + P C GF+S+ +
Sbjct: 130 WTMWKLPMFGCTDSSQVLREIQECKTSYPSCWVRVLGFDSKKQ 172
[141][TOP]
>UniRef100_A9PHQ1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus
trichocarpa RepID=A9PHQ1_POPTR
Length = 181
Score = 91.7 bits (226), Expect(2) = 6e-20
Identities = 55/136 (40%), Positives = 74/136 (54%), Gaps = 13/136 (9%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWT 141
VI+ ++V+ PA+++ V P LK + A PV A + M VW
Sbjct: 5 VISSAAVATVNRTPAQANMVAPFNGLK-STSAFPVTRKANNDITSIASNGGRVQCMQVWP 63
Query: 142 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 321
P K FET SYLP L+ EQ+A +++Y++ N W+PCLEF E +K +V E G
Sbjct: 64 PTGLKKFETLSYLPDLTTEQLAQEIEYLLRNKWVPCLEF-ELEKGWVYREHHQSPG---- 118
Query: 322 LYYDNRYWTMWKLXMF 369
YYD RYWTMWKL MF
Sbjct: 119 -YYDGRYWTMWKLPMF 133
Score = 29.3 bits (64), Expect(2) = 6e-20
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ + KA+P++++R++
Sbjct: 131 PMFGCTEASQVLIELEEAKKAYPNSFIRII 160
[142][TOP]
>UniRef100_P04714 Ribulose bisphosphate carboxylase small chain SSU8, chloroplastic
n=1 Tax=Petunia x hybrida RepID=RBS1_PETHY
Length = 180
Score = 91.7 bits (226), Expect(2) = 6e-20
Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 12/135 (8%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQMMVWTP 144
VI+ ++V+ S V P LK AV + PV++ + M VW P
Sbjct: 5 VISSAAVATRTNVAQASMVAPFNGLKSAV-SFPVSSKQNLDITSIASNGGRVQCMQVWPP 63
Query: 145 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 324
K +ET SYLP L+DEQ+ +++Y++ GW+PCLEF E++ +V E S
Sbjct: 64 YGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEF-ETEHGFVYREY-----HASPR 117
Query: 325 YYDNRYWTMWKLXMF 369
YYD RYWTMWKL MF
Sbjct: 118 YYDGRYWTMWKLPMF 132
Score = 29.3 bits (64), Expect(2) = 6e-20
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + KA+P+A++R++
Sbjct: 130 PMFGCTDATQVLGELQEAKKAYPNAWIRII 159
[143][TOP]
>UniRef100_P19312 Ribulose bisphosphate carboxylase small chain SSU5B, chloroplastic
n=1 Tax=Lemna gibba RepID=RBS6_LEMGI
Length = 177
Score = 92.8 bits (229), Expect(2) = 6e-20
Identities = 56/131 (42%), Positives = 73/131 (55%), Gaps = 15/131 (11%)
Frame = +1
Query: 22 SAAVAR--PARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 156
+AAVAR PA+++ V P L+ +V A P A + + M VW P K
Sbjct: 9 TAAVARVGPAQTNMVAPFNGLRSSV-AFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLK 67
Query: 157 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 336
FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + S YYD
Sbjct: 68 KFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA-------SPGYYDG 120
Query: 337 RYWTMWKLXMF 369
RYWTMWKL MF
Sbjct: 121 RYWTMWKLPMF 131
Score = 28.1 bits (61), Expect(2) = 6e-20
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV+ E+ + KA+P+ +VR++
Sbjct: 129 PMFGCTDASQVIAEVEEAKKAYPEYFVRII 158
[144][TOP]
>UniRef100_Q40004 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Hordeum vulgare RepID=RBS_HORVU
Length = 174
Score = 88.6 bits (218), Expect(2) = 6e-20
Identities = 48/123 (39%), Positives = 67/123 (54%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ S A + +S+ + + +A V+ + M VW K FET SYL
Sbjct: 5 VMASSATSVAPFQGLKSTAGLPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYL 64
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E + QVDY++ + W+PCLEF++ + R + S YYD RYWTMWKL
Sbjct: 65 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMWKL 117
Query: 361 XMF 369
MF
Sbjct: 118 PMF 120
Score = 32.3 bits (72), Expect(2) = 6e-20
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 118 PMFGCTDATQVLNEVEEVKKEYPDAYVRII 147
[145][TOP]
>UniRef100_A9TCL7 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9TCL7_PHYPA
Length = 184
Score = 100 bits (248), Expect = 7e-20
Identities = 58/160 (36%), Positives = 80/160 (50%), Gaps = 7/160 (4%)
Frame = +1
Query: 13 SSVSAAVARPARSSVRPMAALKPAV-------KAAPVAAPAQANQMMVWTPVNNKMFETF 171
++ S+ A ++V+ + LKPA K V ++ M VW P+ FETF
Sbjct: 17 AAASSVAASNESATVKAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETF 76
Query: 172 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 351
SYLPPL+D+QIA QVDY++ IPC+EF +N S G+ S YYD RYWTM
Sbjct: 77 SYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFS----GAGSSGYYDGRYWTM 132
Query: 352 WKLXMFVLR*THAGAARDRRLHQGLPRCLRAPGGFESRSR 471
WKL MF + + P C GF+S+ +
Sbjct: 133 WKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQ 172
[146][TOP]
>UniRef100_B3H5S2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Arabidopsis
thaliana RepID=B3H5S2_ARATH
Length = 186
Score = 88.2 bits (217), Expect(2) = 8e-20
Identities = 52/131 (39%), Positives = 70/131 (53%), Gaps = 13/131 (9%)
Frame = +1
Query: 16 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 156
S +A V PA+++ V P LK + A PV + + M VW P+ K
Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKK 65
Query: 157 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 336
FET SYLP LSD ++A +VDY++ N WIPC+EF E + + R + YYD
Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEF-ELEVINTKHGFVYREHGNTPGYYDG 124
Query: 337 RYWTMWKLXMF 369
RYWTMWKL +F
Sbjct: 125 RYWTMWKLPLF 135
Score = 32.3 bits (72), Expect(2) = 8e-20
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C K +P A++R++
Sbjct: 133 PLFGCTDSAQVLKEVEECKKEYPGAFIRII 162
[147][TOP]
>UniRef100_B7FMC2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Medicago
truncatula RepID=B7FMC2_MEDTR
Length = 181
Score = 95.1 bits (235), Expect(2) = 8e-20
Identities = 43/85 (50%), Positives = 57/85 (67%)
Frame = +1
Query: 115 QANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNES 294
+ N M VW P+ K FET SYLPPL+ EQ+A +V+Y++ GW+ CLEF E++K +V E+
Sbjct: 55 RVNCMQVWPPIGKKKFETLSYLPPLTREQLAKEVEYLIRKGWVACLEF-ETEKGFVYREN 113
Query: 295 AIRFGSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL +F
Sbjct: 114 HSSPG-----YYDGRYWTMWKLPLF 133
Score = 25.4 bits (54), Expect(2) = 8e-20
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +2
Query: 389 QVLREIVDCTKAFPDAYVRLV 451
QVL+E+ + A+P+A+VR++
Sbjct: 140 QVLKELDEVVVAYPNAFVRII 160
[148][TOP]
>UniRef100_Q9SDY9 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena clauda RepID=Q9SDY9_9POAL
Length = 168
Score = 88.2 bits (217), Expect(2) = 8e-20
Identities = 47/123 (38%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ S A + +S+ + + A V+ + M VW K FET SYL
Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSASSLGSVSNGGRIRCMQVWPTEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL
Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.3 bits (72), Expect(2) = 8e-20
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV++E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRII 143
[149][TOP]
>UniRef100_A9NZM2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea
sitchensis RepID=A9NZM2_PICSI
Length = 159
Score = 86.3 bits (212), Expect(2) = 8e-20
Identities = 47/112 (41%), Positives = 58/112 (51%), Gaps = 12/112 (10%)
Frame = +1
Query: 70 ALKPAVKAAPVAAPAQANQ------------MMVWTPVNNKMFETFSYLPPLSDEQIAAQ 213
AL A VAAP + + M VW P NN FET SYLP L+ EQ+ +
Sbjct: 7 ALSSTAAVAAVAAPPKTSNGNGSSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKE 66
Query: 214 VDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
V+Y++ N W+PCLEF E ++GS YYD RYW MWKL MF
Sbjct: 67 VEYLLRNKWVPCLEFDE------DGIIKRKYGSTPG-YYDGRYWVMWKLPMF 111
Score = 34.3 bits (77), Expect(2) = 8e-20
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ +C KA+P A++R++
Sbjct: 109 PMFGCTEASQVLNEVNECAKAYPKAFIRVI 138
[150][TOP]
>UniRef100_P24007 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Pyrus pyrifolia RepID=RBS_PYRPY
Length = 183
Score = 90.5 bits (223), Expect(2) = 1e-19
Identities = 43/81 (53%), Positives = 52/81 (64%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+ K FET SYLPPLS E +A +VDY++ W+PCLEF E + +V E+
Sbjct: 61 MQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEF-ELETGFVYRENHRSP 119
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 120 G-----YYDGRYWTMWKLPMF 135
Score = 29.6 bits (65), Expect(2) = 1e-19
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + KA+P +++R++
Sbjct: 133 PMFGCTDSSQVLKELEEAKKAYPQSFIRII 162
[151][TOP]
>UniRef100_A9PFS6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus
trichocarpa RepID=A9PFS6_POPTR
Length = 182
Score = 89.4 bits (220), Expect(2) = 1e-19
Identities = 60/142 (42%), Positives = 78/142 (54%), Gaps = 20/142 (14%)
Frame = +1
Query: 4 IAKSSV--SAAVARPARSSVR-----PMAALKPAVKAAPVAAPAQANQ------------ 126
+A SS+ SAAVA R+ V+ P LK A A PV+ +AN
Sbjct: 1 MASSSMISSAAVATVNRTPVQANMVAPFNGLKSAA-AFPVST-RKANDITSIASNGGRVQ 58
Query: 127 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 303
M VW P K FET SYLP L++E++A ++DY++ + W+PCLEF E +K +V E
Sbjct: 59 CMQVWPPTGLKKFETLSYLPDLTEEELAKEIDYLLRSKWVPCLEF-ELEKGWVYREHHSS 117
Query: 304 FGSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 118 PG-----YYDGRYWTMWKLPMF 134
Score = 30.8 bits (68), Expect(2) = 1e-19
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ + KA+P+A++R++
Sbjct: 132 PMFGCTEASQVLLELEEAKKAYPNAFIRII 161
[152][TOP]
>UniRef100_Q306K0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica
napus RepID=Q306K0_BRANA
Length = 181
Score = 89.4 bits (220), Expect(2) = 1e-19
Identities = 53/131 (40%), Positives = 71/131 (54%), Gaps = 13/131 (9%)
Frame = +1
Query: 16 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 156
S +A V PA+++ V P LK + A PV A + + M VW PV K
Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKANNDITSIASNGGRVSCMKVWPPVGKK 65
Query: 157 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 336
FET SYLP L++ ++ +VDY++ N WIPC+EF E + +V E G YYD
Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDG 119
Query: 337 RYWTMWKLXMF 369
RYWTMWKL +F
Sbjct: 120 RYWTMWKLPLF 130
Score = 30.8 bits (68), Expect(2) = 1e-19
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C +P+A++R++
Sbjct: 128 PLFGCTDSAQVLKEVQECKTEYPNAFIRII 157
[153][TOP]
>UniRef100_P27985 Ribulose bisphosphate carboxylase small chain F1, chloroplastic n=1
Tax=Brassica napus RepID=RBS2_BRANA
Length = 181
Score = 89.4 bits (220), Expect(2) = 1e-19
Identities = 53/131 (40%), Positives = 71/131 (54%), Gaps = 13/131 (9%)
Frame = +1
Query: 16 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 156
S +A V PA+++ V P LK + A PV A + + M VW PV K
Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKANNDITSIASNGGRVSCMKVWPPVGKK 65
Query: 157 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 336
FET SYLP L++ ++ +VDY++ N WIPC+EF E + +V E G YYD
Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDG 119
Query: 337 RYWTMWKLXMF 369
RYWTMWKL +F
Sbjct: 120 RYWTMWKLPLF 130
Score = 30.8 bits (68), Expect(2) = 1e-19
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C +P+A++R++
Sbjct: 128 PLFGCTDSAQVLKEVQECKTEYPNAFIRII 157
[154][TOP]
>UniRef100_P05346 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Brassica napus RepID=RBS1_BRANA
Length = 181
Score = 89.4 bits (220), Expect(2) = 1e-19
Identities = 53/131 (40%), Positives = 71/131 (54%), Gaps = 13/131 (9%)
Frame = +1
Query: 16 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 156
S +A V PA+++ V P LK + A PV A + + M VW PV K
Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSS-SAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKK 65
Query: 157 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 336
FET SYLP L++ ++ +VDY++ N WIPC+EF E + +V E G YYD
Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDG 119
Query: 337 RYWTMWKLXMF 369
RYWTMWKL +F
Sbjct: 120 RYWTMWKLPLF 130
Score = 30.8 bits (68), Expect(2) = 1e-19
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C +P+A++R++
Sbjct: 128 PLFGCTDSAQVLKEVQECKTEYPNAFIRII 157
[155][TOP]
>UniRef100_P00872 Ribulose bisphosphate carboxylase small chain SSU1, chloroplastic
n=1 Tax=Lemna gibba RepID=RBS1_LEMGI
Length = 173
Score = 92.0 bits (227), Expect(2) = 1e-19
Identities = 51/130 (39%), Positives = 65/130 (50%), Gaps = 14/130 (10%)
Frame = +1
Query: 22 SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ--------------MMVWTPVNNKM 159
+AAVAR + + A + A +AN M VW P K
Sbjct: 5 TAAVARVRPAQTNMVGAFNGCRSSVAFPATRKANNDLSTLPSSGGRVSCMQVWPPEGLKK 64
Query: 160 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 339
FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + S YYD R
Sbjct: 65 FETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYREN-------NASPGYYDGR 117
Query: 340 YWTMWKLXMF 369
YWTMWKL MF
Sbjct: 118 YWTMWKLPMF 127
Score = 28.1 bits (61), Expect(2) = 1e-19
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV+ E+ + KA+P+ +VR++
Sbjct: 125 PMFGCTDASQVIAEVEEAKKAYPEYFVRII 154
[156][TOP]
>UniRef100_A9U380 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9U380_PHYPA
Length = 156
Score = 99.4 bits (246), Expect = 1e-19
Identities = 58/129 (44%), Positives = 73/129 (56%), Gaps = 7/129 (5%)
Frame = +1
Query: 4 IAKSSVSAAVARPARSSVRPMAALKPAV-------KAAPVAAPAQANQMMVWTPVNNKMF 162
+A SSV+A+ SSV+ + LK A + + V ++ M VW P+ F
Sbjct: 21 VASSSVAAS---RESSSVKAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKF 77
Query: 163 ETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRY 342
ETFSYLPPLSD+QIA QVDY++ IPC+EF +N S GS S YYD RY
Sbjct: 78 ETFSYLPPLSDDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFS----GSGSSGYYDGRY 133
Query: 343 WTMWKLXMF 369
WTMWKL MF
Sbjct: 134 WTMWKLPMF 142
[157][TOP]
>UniRef100_Q67IU5 Ribulose bisphosphate carboxylase small chain n=2 Tax=Oryza sativa
RepID=Q67IU5_ORYSJ
Length = 183
Score = 84.0 bits (206), Expect(2) = 1e-19
Identities = 36/81 (44%), Positives = 51/81 (62%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M W P N+ +E SYLPPLS + I+ ++++I++ GW+PCLEF + + + SN
Sbjct: 51 MQTWNPFTNRRYEAMSYLPPLSAKSISKEIEFIMSKGWVPCLEFDKEGEIHRSN------ 104
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
S YYD RYWT+WKL MF
Sbjct: 105 -SRMPGYYDGRYWTLWKLPMF 124
Score = 35.8 bits (81), Expect(2) = 1e-19
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVA 454
P C + VLRE+ +C + +PDA++RL+A
Sbjct: 122 PMFGCSDAAAVLREVEECRREYPDAFIRLIA 152
[158][TOP]
>UniRef100_A9PJ78 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus
trichocarpa x Populus deltoides RepID=A9PJ78_9ROSI
Length = 182
Score = 89.7 bits (221), Expect(2) = 1e-19
Identities = 54/137 (39%), Positives = 77/137 (56%), Gaps = 14/137 (10%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ-------------MMVW 138
+I+ ++V+ PA+++ V P LK + A PV+ +AN M VW
Sbjct: 6 MISSAAVATVHRTPAQANMVAPFNGLK-STAAFPVST-RKANDITSIASNGGRVQCMQVW 63
Query: 139 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 318
P K FET SYLP L++E++A ++DY++ + W+PCLEF E +K +V E G
Sbjct: 64 PPTGLKKFETLSYLPDLTEEELAKEIDYLLRSKWVPCLEF-ELEKGWVHREHHSSPG--- 119
Query: 319 CLYYDNRYWTMWKLXMF 369
YYD RYWTMWKL MF
Sbjct: 120 --YYDGRYWTMWKLPMF 134
Score = 30.0 bits (66), Expect(2) = 1e-19
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ + KA+P+A++R++
Sbjct: 132 PMFGCTEASQVLVELGEAKKAYPNAFIRII 161
[159][TOP]
>UniRef100_Q8VX71 Ribulose bisphosphate carboxylase small chain n=1 Tax=Rumex
obtusifolius RepID=Q8VX71_RUMOB
Length = 181
Score = 91.3 bits (225), Expect(2) = 1e-19
Identities = 52/128 (40%), Positives = 69/128 (53%), Gaps = 12/128 (9%)
Frame = +1
Query: 22 SAAVARPARSS---VRPMAALKPAV------KAAPVAAPAQANQ---MMVWTPVNNKMFE 165
SA VARP+ + + P LK K++ ++ P+ + M VW P FE
Sbjct: 8 SATVARPSAAQATVIAPFTGLKNIATFPTTRKSSDLSFPSNGGKVRCMQVWPPEGKIKFE 67
Query: 166 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 345
T SYLPPLS+ + AQ++Y++ NGW+PCLEF V + R S YYD RYW
Sbjct: 68 TLSYLPPLSEADLLAQINYLLINGWVPCLEFD------VGPGAVYREHHHSPGYYDGRYW 121
Query: 346 TMWKLXMF 369
TMWKL MF
Sbjct: 122 TMWKLPMF 129
Score = 28.5 bits (62), Expect(2) = 1e-19
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV+ E+ + KA+P A+VR++
Sbjct: 127 PMFGCTDATQVVAELEEAKKAYPHAFVRII 156
[160][TOP]
>UniRef100_P04715 Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic
n=1 Tax=Petunia x hybrida RepID=RBS2_PETHY
Length = 180
Score = 90.5 bits (223), Expect(2) = 1e-19
Identities = 50/135 (37%), Positives = 71/135 (52%), Gaps = 12/135 (8%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQMMVWTP 144
V++ ++V+ + S V P LK A + PV+ + M VW P
Sbjct: 5 VMSSAAVATSTNAAQASMVAPFTGLKSAA-SFPVSRKQNLDITSIASNGGRVQCMQVWPP 63
Query: 145 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 324
K +ET SYLP L+DEQ+ +++Y++ GW+PCLEF E++ +V E S
Sbjct: 64 YGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEF-ETEHGFVYREY-----HASPR 117
Query: 325 YYDNRYWTMWKLXMF 369
YYD RYWTMWKL MF
Sbjct: 118 YYDGRYWTMWKLPMF 132
Score = 29.3 bits (64), Expect(2) = 1e-19
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + KA+P+A++R++
Sbjct: 130 PMFGCTDATQVLGELQEAKKAYPNAWIRII 159
[161][TOP]
>UniRef100_Q9SDY8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena clauda RepID=Q9SDY8_9POAL
Length = 168
Score = 87.4 bits (215), Expect(2) = 1e-19
Identities = 47/123 (38%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ S A + +S+ + + A V+ + M VW K FET SYL
Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSASSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL
Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.3 bits (72), Expect(2) = 1e-19
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV++E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRII 143
[162][TOP]
>UniRef100_Q9SAX2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Aegilops sharonensis RepID=Q9SAX2_9POAL
Length = 165
Score = 87.8 bits (216), Expect(2) = 1e-19
Identities = 46/123 (37%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ + + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRYMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL
Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.0 bits (71), Expect(2) = 1e-19
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVI 143
[163][TOP]
>UniRef100_Q106Y4 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Musa acuminata RepID=Q106Y4_MUSAC
Length = 161
Score = 87.4 bits (215), Expect(2) = 1e-19
Identities = 55/136 (40%), Positives = 72/136 (52%), Gaps = 13/136 (9%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMVWT 141
++ S+ + + A PA+SS V P LK + A PV A A+ M VW
Sbjct: 3 MMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPGNGGRVQCMKVWP 61
Query: 142 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 321
K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G
Sbjct: 62 IEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVWRENHRSPG---- 115
Query: 322 LYYDNRYWTMWKLXMF 369
YYD RYWTMWKL MF
Sbjct: 116 -YYDGRYWTMWKLPMF 130
Score = 32.3 bits (72), Expect(2) = 1e-19
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + +QV++E+ +C K +P A+VR++
Sbjct: 128 PMFGCTDAVQVVKEVEECKKEYPKAFVRII 157
[164][TOP]
>UniRef100_Q00SG3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus
tauri RepID=Q00SG3_OSTTA
Length = 191
Score = 99.0 bits (245), Expect = 1e-19
Identities = 53/141 (37%), Positives = 69/141 (48%), Gaps = 24/141 (17%)
Frame = +1
Query: 112 AQANQMMVWTPVNNK-----------------------MFETFSYLPPLSDEQIAAQVDY 222
A A MM+W P NK MFETFS+LPPLSD +IA Q Y
Sbjct: 22 ANAKSMMIWRPHGNKYVSRKIKAHARGCVLAITRASRPMFETFSFLPPLSDAEIAKQCQY 81
Query: 223 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLXMFVLR*THAGAA 399
++ NGW PC+EF +++ AY S++ LYYDNRYW MWKL M+ + T A
Sbjct: 82 LLNNGWTPCIEFEDAEHAYADGHGWSNLDSSINSLYYDNRYWVMWKLPMYGCQNTDEVLA 141
Query: 400 RDRRLHQGLPRCLRAPGGFES 462
+ P C GF++
Sbjct: 142 EVNMAKKCFPDCYIRVVGFDN 162
[165][TOP]
>UniRef100_P05348 Ribulose bisphosphate carboxylase small chain, chloroplastic n=2
Tax=Zea mays RepID=RBS_MAIZE
Length = 170
Score = 99.0 bits (245), Expect = 1e-19
Identities = 51/123 (41%), Positives = 68/123 (55%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
++A S+ + A + +S+ A + + V+ + M VW NK FET SYL
Sbjct: 6 MMASSATAVAPFQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYL 65
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS + + QVDY++ NGWIPCLEF++ Y N S S YYD RYWTMWKL
Sbjct: 66 PPLSTDDLLKQVDYLLRNGWIPCLEFSKVGFVYREN-------STSPCYYDGRYWTMWKL 118
Query: 361 XMF 369
MF
Sbjct: 119 PMF 121
[166][TOP]
>UniRef100_Q43746 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica
napus RepID=Q43746_BRANA
Length = 181
Score = 88.6 bits (218), Expect(2) = 2e-19
Identities = 56/137 (40%), Positives = 75/137 (54%), Gaps = 15/137 (10%)
Frame = +1
Query: 4 IAKSSVSAA--VARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVW 138
+A S +S+A V+ PA+++ V P LK + A PV + N M VW
Sbjct: 1 MASSMLSSATVVSSPAQAAMVAPFTGLKSSA-AFPVTRKTNTDITSIASNGGRVNCMKVW 59
Query: 139 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 318
PV K FET SYLP L+D ++A +VDY++ N WIPC+EF E + +V E G
Sbjct: 60 PPVGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG--- 115
Query: 319 CLYYDNRYWTMWKLXMF 369
Y D RYWTMWKL +F
Sbjct: 116 --YNDGRYWTMWKLPLF 130
Score = 30.8 bits (68), Expect(2) = 2e-19
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C +P+A++R++
Sbjct: 128 PLFGCTDSAQVLKEVQECKTEYPNAFIRII 157
[167][TOP]
>UniRef100_P12468 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1
Tax=Glycine max RepID=RBS4_SOYBN
Length = 178
Score = 92.0 bits (227), Expect(2) = 2e-19
Identities = 44/81 (54%), Positives = 51/81 (62%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E
Sbjct: 56 MQVWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSL 114
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 115 G-----YYDGRYWTMWKLPMF 130
Score = 27.3 bits (59), Expect(2) = 2e-19
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + A+P+ ++R++
Sbjct: 128 PMFGCTDASQVLKELQEAKTAYPNGFIRII 157
[168][TOP]
>UniRef100_Q42900 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Larix laricina RepID=Q42900_LARLA
Length = 171
Score = 82.8 bits (203), Expect(2) = 2e-19
Identities = 40/86 (46%), Positives = 50/86 (58%)
Frame = +1
Query: 112 AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNE 291
A+ M VW P NK +ET SYLP L+ EQ+ +V+Y++ N W+PCLEF E +
Sbjct: 45 ARVRCMQVWPPYANKKWETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIK---- 100
Query: 292 SAIRFGSVSCLYYDNRYWTMWKLXMF 369
R S YYD RYW MWKL MF
Sbjct: 101 ---RVYGNSPGYYDGRYWVMWKLPMF 123
Score = 36.6 bits (83), Expect(2) = 2e-19
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ +C KA+P+AY+R++
Sbjct: 121 PMFGCTEASQVLNEVNECAKAYPNAYIRVI 150
[169][TOP]
>UniRef100_Q6A159 Ribulose bisphosphate carboxylase small chain n=1 Tax=Limonium
gibertii RepID=Q6A159_9CARY
Length = 154
Score = 84.7 bits (208), Expect(2) = 2e-19
Identities = 41/81 (50%), Positives = 50/81 (61%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P K FET SYLPPL E +A ++ Y++ GW+PCLEF E +AY+ E
Sbjct: 33 MQVWPPEGLKKFETLSYLPPLDREGLANEISYLMRMGWVPCLEF-EVGEAYIHREYHNLP 91
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL M+
Sbjct: 92 G-----YYDGRYWTMWKLPMY 107
Score = 34.7 bits (78), Expect(2) = 2e-19
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C +P QVL+E+ +C+K +P A++R++
Sbjct: 105 PMYGCTDPAQVLKEVDECSKLYPHAHIRIL 134
[170][TOP]
>UniRef100_P16031 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Larix laricina RepID=RBS_LARLA
Length = 189
Score = 84.0 bits (206), Expect(2) = 2e-19
Identities = 40/81 (49%), Positives = 48/81 (59%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P NK FET SYLP L+ EQ+ +V+Y++ N W+PCLEF E + R
Sbjct: 68 MQVWPPYANKKFETLSYLPRLTPEQLVKEVEYLLKNKWVPCLEFEEDGEIK-------RV 120
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
S YYD RYW MWKL MF
Sbjct: 121 YGNSPGYYDGRYWVMWKLPMF 141
Score = 35.0 bits (79), Expect(2) = 2e-19
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ +C KA+P+A++R++
Sbjct: 139 PMFGCTEASQVLNEVNECAKAYPNAFIRVI 168
[171][TOP]
>UniRef100_P31333 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Gossypium hirsutum RepID=RBS_GOSHI
Length = 182
Score = 87.4 bits (215), Expect(2) = 2e-19
Identities = 56/141 (39%), Positives = 77/141 (54%), Gaps = 19/141 (13%)
Frame = +1
Query: 4 IAKSSVSAAV------ARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQ 126
+A S +S+A + PA+++ V P LK A A PV A +
Sbjct: 1 MASSMISSATIATVNCSSPAQANMVAPFTGLKSA-SAFPVTRKANNDITSLASNGGRVQC 59
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+ K FET SYLP L+ Q+A +VDY++ + WIPCLEF E ++ +V ++
Sbjct: 60 MQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEF-ELEEGFVHR----KY 114
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
S+ YYD RYWTMWKL MF
Sbjct: 115 SSLP-TYYDGRYWTMWKLPMF 134
Score = 31.6 bits (70), Expect(2) = 2e-19
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ +C K +P+A++R++
Sbjct: 132 PMFGCTDSAQVLEELENCKKEYPNAFIRII 161
[172][TOP]
>UniRef100_Q9FRZ5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum
aestivum RepID=Q9FRZ5_WHEAT
Length = 175
Score = 87.4 bits (215), Expect(2) = 2e-19
Identities = 48/124 (38%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 177
V+A S+ S A + +S+ P++ V+ + +M VW K FET SY
Sbjct: 5 VMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRRMQVWPIEGIKKFETLSY 64
Query: 178 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 357
LPPLS E + QVDY++ + W+PCLEF++ + R + S YYD RYWTMWK
Sbjct: 65 LPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMWK 117
Query: 358 LXMF 369
L MF
Sbjct: 118 LPMF 121
Score = 31.6 bits (70), Expect(2) = 2e-19
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV+ E+ + K +PDAYVR++
Sbjct: 119 PMFGCTDATQVINEVEEVKKEYPDAYVRII 148
[173][TOP]
>UniRef100_Q9FRZ2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum
aestivum RepID=Q9FRZ2_WHEAT
Length = 175
Score = 87.0 bits (214), Expect(2) = 2e-19
Identities = 48/124 (38%), Positives = 68/124 (54%), Gaps = 1/124 (0%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 177
V+A S+ S A + +S+ P++ + + V+ + M VW K FET SY
Sbjct: 5 VMASSATSVAPFQGLKSTAGLPVSRRSSSAGLSSVSNGGRIRCMQVWPIEGIKKFETLSY 64
Query: 178 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 357
LPPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWK
Sbjct: 65 LPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWK 117
Query: 358 LXMF 369
L MF
Sbjct: 118 LPMF 121
Score = 32.0 bits (71), Expect(2) = 2e-19
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 119 PMFGCTDATQVLNEVEEVKKEYPDAYVRVI 148
[174][TOP]
>UniRef100_Q9ZSS1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena strigosa RepID=Q9ZSS1_9POAL
Length = 168
Score = 85.1 bits (209), Expect(2) = 2e-19
Identities = 46/123 (37%), Positives = 65/123 (52%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ S A + +S+ + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL
Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 33.9 bits (76), Expect(2) = 2e-19
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV++E+ D K +PDAYVR++
Sbjct: 114 PMFGCTDASQVIKEVEDVKKKYPDAYVRII 143
[175][TOP]
>UniRef100_Q9SAW4 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Secale cereale RepID=Q9SAW4_SECCE
Length = 165
Score = 87.0 bits (214), Expect(2) = 2e-19
Identities = 47/123 (38%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ S A + +S+ + + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL
Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.0 bits (71), Expect(2) = 2e-19
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVI 143
[176][TOP]
>UniRef100_Q9S7N3 Ribulose bisphosphate carboxylase small chain (Fragment) n=2
Tax=Triticeae RepID=Q9S7N3_AEGLO
Length = 165
Score = 87.0 bits (214), Expect(2) = 2e-19
Identities = 46/123 (37%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ + + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL
Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.0 bits (71), Expect(2) = 2e-19
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVI 143
[177][TOP]
>UniRef100_Q84LN2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Citrus limon RepID=Q84LN2_CITLI
Length = 119
Score = 91.7 bits (226), Expect(2) = 2e-19
Identities = 44/81 (54%), Positives = 53/81 (65%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P K FET SYLPPLSDE + +++Y++ +GWIPCLEF E +K +V E
Sbjct: 7 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLLRSGWIPCLEF-ELEKGWVYREHHRSP 65
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 66 G-----YYDGRYWTMWKLPMF 81
Score = 27.3 bits (59), Expect(2) = 2e-19
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + K +P ++VR++
Sbjct: 79 PMFGCTDATQVLKEVGEVQKEYPHSFVRII 108
[178][TOP]
>UniRef100_Q8W2C5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Larrea tridentata RepID=Q8W2C5_LARTR
Length = 107
Score = 87.0 bits (214), Expect(2) = 2e-19
Identities = 41/81 (50%), Positives = 51/81 (62%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P K ET SYLPPLS E +A +++Y + GWIPCLEF+ + +V E++
Sbjct: 2 MKVWPPRGKKKLETLSYLPPLSIESLAKEIEYFIRKGWIPCLEFS-IESGFVYRETSRMP 60
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 61 G-----YYDGRYWTMWKLPMF 76
Score = 32.0 bits (71), Expect(2) = 2e-19
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRL 448
P C + +QVL E+ + KA+PDA++R+
Sbjct: 74 PMFGCTDAVQVLNELEEAKKAYPDAFIRI 102
[179][TOP]
>UniRef100_Q9T4H0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Manihot
esculenta RepID=Q9T4H0_MANES
Length = 184
Score = 90.5 bits (223), Expect(2) = 3e-19
Identities = 54/125 (43%), Positives = 67/125 (53%), Gaps = 13/125 (10%)
Frame = +1
Query: 34 ARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMVWTPVNNKMFETFS 174
A PA++S V P LK + A P A+ M VW K FET S
Sbjct: 17 ASPAQASMVAPFTGLK-STSAFPATTKTSADITSLASNGGRVQCMQVWPTRGKKKFETLS 75
Query: 175 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 354
YLPPLS EQ+A+++DY++ +GWIPCLEF E + +V G YYD RYWTMW
Sbjct: 76 YLPPLSREQLASEIDYLLRSGWIPCLEF-ELEHGFVYRAHGSLPG-----YYDGRYWTMW 129
Query: 355 KLXMF 369
KL MF
Sbjct: 130 KLPMF 134
Score = 28.1 bits (61), Expect(2) = 3e-19
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + KA PD + R++
Sbjct: 132 PMFGCTDSSQVLKELDELIKAHPDGFARII 161
[180][TOP]
>UniRef100_A9XP21 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Sonneratia apetala RepID=A9XP21_9MYRT
Length = 178
Score = 90.9 bits (224), Expect(2) = 3e-19
Identities = 57/132 (43%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Frame = +1
Query: 13 SSVSAAVAR--PARSS-VRPMAALKPAV------KAAPVAAPA----QANQMMVWTPVNN 153
SS + AV R PA++S V P LK + K A + + A + M VW P
Sbjct: 2 SSATMAVNRTAPAQASMVAPFTGLKSSSAFPTTRKTADITSLASNGGRVQCMQVWPPEGL 61
Query: 154 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 333
K FET SYLP LS EQ+ +++Y++ NGW PCLEF+ AY E+ G YYD
Sbjct: 62 KKFETLSYLPDLSREQLIKEIEYLIRNGWFPCLEFSCPAFAYPYRENHRSPG-----YYD 116
Query: 334 NRYWTMWKLXMF 369
RYWTMWKL MF
Sbjct: 117 GRYWTMWKLPMF 128
Score = 27.7 bits (60), Expect(2) = 3e-19
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKA 463
P C +P+QV++E+ + KA+P + R+ A
Sbjct: 126 PMFGCTDPIQVIKELDEGIKAYPTYFFRIAGFSA 159
[181][TOP]
>UniRef100_Q9SNZ6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena maroccana RepID=Q9SNZ6_9POAL
Length = 168
Score = 85.1 bits (209), Expect(2) = 3e-19
Identities = 46/123 (37%), Positives = 65/123 (52%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ S A + +S+ + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL
Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 33.5 bits (75), Expect(2) = 3e-19
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV+RE+ + K +PDAYVR++
Sbjct: 114 PMFGCTDASQVIREVEEVKKEYPDAYVRII 143
[182][TOP]
>UniRef100_Q9SAX5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Aegilops speltoides RepID=Q9SAX5_AEGSP
Length = 165
Score = 87.0 bits (214), Expect(2) = 3e-19
Identities = 46/123 (37%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ + + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL
Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 31.6 bits (70), Expect(2) = 3e-19
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDATQVLSEVEEVKKEYPDAYVRVI 143
[183][TOP]
>UniRef100_A9NL36 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea
sitchensis RepID=A9NL36_PICSI
Length = 195
Score = 84.0 bits (206), Expect(2) = 4e-19
Identities = 40/81 (49%), Positives = 49/81 (60%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF E ++
Sbjct: 74 MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEFDE------DGIIKRKY 127
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
GS YYD RYW MWKL MF
Sbjct: 128 GSTPG-YYDGRYWVMWKLPMF 147
Score = 34.3 bits (77), Expect(2) = 4e-19
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ +C KA+P A++R++
Sbjct: 145 PMFGCTEASQVLNEVNECAKAYPKAFIRVI 174
[184][TOP]
>UniRef100_C0PR41 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea
sitchensis RepID=C0PR41_PICSI
Length = 194
Score = 84.0 bits (206), Expect(2) = 4e-19
Identities = 40/81 (49%), Positives = 49/81 (60%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF E ++
Sbjct: 73 MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDE------DGIIKRKY 126
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
GS YYD RYW MWKL MF
Sbjct: 127 GSTPG-YYDGRYWVMWKLPMF 146
Score = 34.3 bits (77), Expect(2) = 4e-19
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ +C KA+P A++R++
Sbjct: 144 PMFGCTEASQVLNEVNECAKAYPKAFIRVI 173
[185][TOP]
>UniRef100_C0PQS9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea
sitchensis RepID=C0PQS9_PICSI
Length = 194
Score = 84.0 bits (206), Expect(2) = 4e-19
Identities = 40/81 (49%), Positives = 49/81 (60%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF E ++
Sbjct: 73 MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDE------DGIIKRKY 126
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
GS YYD RYW MWKL MF
Sbjct: 127 GSTPG-YYDGRYWVMWKLPMF 146
Score = 34.3 bits (77), Expect(2) = 4e-19
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ +C KA+P A++R++
Sbjct: 144 PMFGCTEASQVLNEVNECAKAYPKAFIRVI 173
[186][TOP]
>UniRef100_A9NM29 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea
sitchensis RepID=A9NM29_PICSI
Length = 194
Score = 84.0 bits (206), Expect(2) = 4e-19
Identities = 40/81 (49%), Positives = 49/81 (60%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF E ++
Sbjct: 73 MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDE------DGIIKRKY 126
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
GS YYD RYW MWKL MF
Sbjct: 127 GSTPG-YYDGRYWVMWKLPMF 146
Score = 34.3 bits (77), Expect(2) = 4e-19
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ +C KA+P A++R++
Sbjct: 144 PMFGCTEASQVLNEVNECAKAYPKAFIRVI 173
[187][TOP]
>UniRef100_A9NLD6 Ribulose bisphosphate carboxylase small chain n=2 Tax=Picea
sitchensis RepID=A9NLD6_PICSI
Length = 194
Score = 84.0 bits (206), Expect(2) = 4e-19
Identities = 40/81 (49%), Positives = 49/81 (60%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF E ++
Sbjct: 73 MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDE------DGIIKRKY 126
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
GS YYD RYW MWKL MF
Sbjct: 127 GSTPG-YYDGRYWVMWKLPMF 146
Score = 34.3 bits (77), Expect(2) = 4e-19
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ +C KA+P A++R++
Sbjct: 144 PMFGCTEASQVLNEVNECAKAYPKAFIRVI 173
[188][TOP]
>UniRef100_A9NKU8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea
sitchensis RepID=A9NKU8_PICSI
Length = 194
Score = 84.0 bits (206), Expect(2) = 4e-19
Identities = 40/81 (49%), Positives = 49/81 (60%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF E ++
Sbjct: 73 MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDE------DGIIKRKY 126
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
GS YYD RYW MWKL MF
Sbjct: 127 GSTPG-YYDGRYWVMWKLPMF 146
Score = 34.3 bits (77), Expect(2) = 4e-19
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ +C KA+P A++R++
Sbjct: 144 PMFGCTEASQVLNEVNECAKAYPKAFIRVI 173
[189][TOP]
>UniRef100_A9NNZ8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea
sitchensis RepID=A9NNZ8_PICSI
Length = 193
Score = 84.0 bits (206), Expect(2) = 4e-19
Identities = 40/81 (49%), Positives = 49/81 (60%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF E ++
Sbjct: 72 MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEFDE------DGIIKRKY 125
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
GS YYD RYW MWKL MF
Sbjct: 126 GSTPG-YYDGRYWVMWKLPMF 145
Score = 34.3 bits (77), Expect(2) = 4e-19
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ +C KA+P A++R++
Sbjct: 143 PMFGCTEASQVLNEVNECAKAYPKAFIRVI 172
[190][TOP]
>UniRef100_A9NML5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea
sitchensis RepID=A9NML5_PICSI
Length = 193
Score = 84.0 bits (206), Expect(2) = 4e-19
Identities = 40/81 (49%), Positives = 49/81 (60%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF E ++
Sbjct: 72 MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEFDE------DGIIKRKY 125
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
GS YYD RYW MWKL MF
Sbjct: 126 GSTPG-YYDGRYWVMWKLPMF 145
Score = 34.3 bits (77), Expect(2) = 4e-19
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ +C KA+P A++R++
Sbjct: 143 PMFGCTEASQVLNEVNECAKAYPKAFIRVI 172
[191][TOP]
>UniRef100_A9NMJ1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea
sitchensis RepID=A9NMJ1_PICSI
Length = 193
Score = 84.0 bits (206), Expect(2) = 4e-19
Identities = 40/81 (49%), Positives = 49/81 (60%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF E ++
Sbjct: 72 MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLRNKWVPCLEFDE------DGIIKRKY 125
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
GS YYD RYW MWKL MF
Sbjct: 126 GSTPG-YYDGRYWVMWKLPMF 145
Score = 34.3 bits (77), Expect(2) = 4e-19
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ +C KA+P A++R++
Sbjct: 143 PMFGCTEASQVLNEVNECAKAYPKAFIRVI 172
[192][TOP]
>UniRef100_B1PLM0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Hevea
brasiliensis RepID=B1PLM0_HEVBR
Length = 183
Score = 87.8 bits (216), Expect(2) = 4e-19
Identities = 43/81 (53%), Positives = 50/81 (61%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P K FETF YLPPL+ EQ+A +V+Y+ GW+PCLEF E + V E
Sbjct: 60 MQVWPPRGKKFFETFLYLPPLTREQLAKEVEYLFCKGWVPCLEF-ELEHGTVYREYHRSP 118
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 119 G-----YYDGRYWTMWKLPMF 134
Score = 30.4 bits (67), Expect(2) = 4e-19
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + +QVL+E+ + KA+PD Y R++
Sbjct: 132 PMFGCTDAVQVLQELDEMIKAYPDCYGRII 161
[193][TOP]
>UniRef100_C6SVL2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max
RepID=C6SVL2_SOYBN
Length = 178
Score = 90.9 bits (224), Expect(2) = 4e-19
Identities = 44/81 (54%), Positives = 51/81 (62%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E
Sbjct: 56 MQVWAPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSP 114
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 115 G-----YYDGRYWTMWKLPMF 130
Score = 27.3 bits (59), Expect(2) = 4e-19
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + A+P+ ++R++
Sbjct: 128 PMFGCTDASQVLKELQEAKTAYPNGFIRII 157
[194][TOP]
>UniRef100_P00865 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1
Tax=Glycine max RepID=RBS1_SOYBN
Length = 178
Score = 90.9 bits (224), Expect(2) = 4e-19
Identities = 43/81 (53%), Positives = 52/81 (64%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+ K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E
Sbjct: 56 MQVWPPIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREH---- 110
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
+ S YYD RYWTMWKL MF
Sbjct: 111 -NRSPXYYDGRYWTMWKLPMF 130
Score = 27.3 bits (59), Expect(2) = 4e-19
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + A+P+ ++R++
Sbjct: 128 PMFGCTDASQVLKELQEAKTAYPNGFIRII 157
[195][TOP]
>UniRef100_Q9FEE4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum
aestivum RepID=Q9FEE4_WHEAT
Length = 174
Score = 86.3 bits (212), Expect(2) = 4e-19
Identities = 46/123 (37%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ + + + V+ + M VW K FET SYL
Sbjct: 5 VMASSATTVAPFQGLKSTAGLPVSRRSSGSLGRVSNGGRIRCMQVWPIEGIKKFETLSYL 64
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL
Sbjct: 65 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SSGYYDGRYWTMWKL 117
Query: 361 XMF 369
MF
Sbjct: 118 PMF 120
Score = 32.0 bits (71), Expect(2) = 4e-19
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 118 PMFGCTDATQVLNEVEEVKKEYPDAYVRVI 147
[196][TOP]
>UniRef100_Q9ZSS0 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena clauda RepID=Q9ZSS0_9POAL
Length = 168
Score = 85.9 bits (211), Expect(2) = 4e-19
Identities = 45/123 (36%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ + + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL
Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.3 bits (72), Expect(2) = 4e-19
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV++E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRII 143
[197][TOP]
>UniRef100_Q9SNZ8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena clauda RepID=Q9SNZ8_9POAL
Length = 168
Score = 85.9 bits (211), Expect(2) = 4e-19
Identities = 46/123 (37%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ + + A V+ + M VW K FET SYL
Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSASSLGNVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL
Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.3 bits (72), Expect(2) = 4e-19
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV++E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRII 143
[198][TOP]
>UniRef100_Q9ZWG6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Hordeum vulgare RepID=Q9ZWG6_HORVU
Length = 165
Score = 85.9 bits (211), Expect(2) = 4e-19
Identities = 45/123 (36%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ + + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPL+ E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL
Sbjct: 61 PPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.3 bits (72), Expect(2) = 4e-19
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRII 143
[199][TOP]
>UniRef100_Q6A160 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Limonium gibertii RepID=Q6A160_9CARY
Length = 153
Score = 84.7 bits (208), Expect(2) = 4e-19
Identities = 41/81 (50%), Positives = 50/81 (61%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P K FET SYLPPL E +A ++ Y++ GW+PCLEF E +AY+ E
Sbjct: 33 MQVWPPEGLKKFETLSYLPPLDREGLANEISYLMRMGWVPCLEF-EVGEAYIHREYHNLP 91
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL M+
Sbjct: 92 G-----YYDGRYWTMWKLPMY 107
Score = 33.5 bits (75), Expect(2) = 4e-19
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C +P QVL+E+ +C++ +P A+VR++
Sbjct: 105 PMYGCTDPAQVLKEVDECSQLYPHAHVRIL 134
[200][TOP]
>UniRef100_P00868 Ribulose bisphosphate carboxylase small chain, chloroplastic
(Fragment) n=1 Tax=Pisum sativum RepID=RBS1_PEA
Length = 136
Score = 90.1 bits (222), Expect(2) = 4e-19
Identities = 42/81 (51%), Positives = 53/81 (65%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+ K FET SYLPPL+ +Q+ +V+Y++ GW+PCLEF E K +V E
Sbjct: 14 MQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEF-ELLKGFVYGEH---- 68
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
+ S YYD RYWTMWKL MF
Sbjct: 69 -NKSPRYYDGRYWTMWKLPMF 88
Score = 28.1 bits (61), Expect(2) = 4e-19
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = +2
Query: 380 EPMQVLREIVDCTKAFPDAYVRLV 451
+P QV++E+ + A+P+A+VR++
Sbjct: 92 DPAQVVKEVDEVVAAYPEAFVRVI 115
[201][TOP]
>UniRef100_C0PPN4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea
sitchensis RepID=C0PPN4_PICSI
Length = 136
Score = 84.0 bits (206), Expect(2) = 4e-19
Identities = 40/81 (49%), Positives = 49/81 (60%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P NN FET SYLP L+ EQ+ +V+Y++ N W+PCLEF E ++
Sbjct: 15 MQVWPPYNNPKFETLSYLPRLTQEQLLKEVEYLLKNKWVPCLEFDE------DGIIKRKY 68
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
GS YYD RYW MWKL MF
Sbjct: 69 GSTPG-YYDGRYWVMWKLPMF 88
Score = 34.3 bits (77), Expect(2) = 4e-19
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C E QVL E+ +C KA+P A++R++
Sbjct: 86 PMFGCTEASQVLNEVNECAKAYPKAFIRVI 115
[202][TOP]
>UniRef100_Q9AXP2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Citrus reticulata RepID=Q9AXP2_CITRE
Length = 118
Score = 90.9 bits (224), Expect(2) = 4e-19
Identities = 43/81 (53%), Positives = 52/81 (64%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P K FET SYLPPLSDE + ++ Y++ +GWIPCLEF E +K +V E
Sbjct: 2 MQVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEF-ELEKGWVYREHHSSP 60
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL M+
Sbjct: 61 G-----YYDGRYWTMWKLPMY 76
Score = 27.3 bits (59), Expect(2) = 4e-19
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + K +P ++VR++
Sbjct: 74 PMYGCTDATQVLKEVGEVQKEYPHSFVRII 103
[203][TOP]
>UniRef100_A9T3W5 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9T3W5_PHYPA
Length = 179
Score = 97.4 bits (241), Expect = 4e-19
Identities = 61/163 (37%), Positives = 83/163 (50%), Gaps = 7/163 (4%)
Frame = +1
Query: 4 IAKSSVSAAVARPARSSVRPMAALKP-------AVKAAPVAAPAQANQMMVWTPVNNKMF 162
I ++ AAV R + SSV+ + LK A + + V ++ M VW P+ F
Sbjct: 10 IVAAASPAAVCRES-SSVKQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKF 68
Query: 163 ETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRY 342
ETFSYLPPL+D+QIA QVD+++ IPC+EF +N S G S YYD RY
Sbjct: 69 ETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFS----GPGSSGYYDGRY 124
Query: 343 WTMWKLXMFVLR*THAGAARDRRLHQGLPRCLRAPGGFESRSR 471
WTMWKL MF + + Q P C GF+S+ +
Sbjct: 125 WTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQ 167
[204][TOP]
>UniRef100_A1YN03 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica rapa
RepID=A1YN03_BRACM
Length = 181
Score = 87.0 bits (214), Expect(2) = 5e-19
Identities = 52/131 (39%), Positives = 70/131 (53%), Gaps = 13/131 (9%)
Frame = +1
Query: 16 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 156
S +A V PA+++ V P LK + A PV A + + M VW PV K
Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSS-SAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKK 65
Query: 157 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 336
FET SYLP L++ ++ +VDY++ N WIPC+E E + +V E G YYD
Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEL-ELEHGFVYREHGSTPG-----YYDG 119
Query: 337 RYWTMWKLXMF 369
RYWTMWKL +F
Sbjct: 120 RYWTMWKLPLF 130
Score = 30.8 bits (68), Expect(2) = 5e-19
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C +P+A++R++
Sbjct: 128 PLFGCTDSAQVLKEVQECKTEYPNAFIRII 157
[205][TOP]
>UniRef100_Q84Y16 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chrysanthemum
x morifolium RepID=Q84Y16_CHRMO
Length = 179
Score = 86.3 bits (212), Expect(2) = 5e-19
Identities = 55/133 (41%), Positives = 71/133 (53%), Gaps = 14/133 (10%)
Frame = +1
Query: 13 SSVSAAVARPAR---SSVRPMAALKPAVKAAPV--------AAPAQANQ---MMVWTPVN 150
SS A V R S V P LK V A PV + P+ + M VW P+
Sbjct: 6 SSAVATVNRTTSAQASMVAPFTGLKSNV-AFPVTKKSNDFSSLPSNGGRVQCMKVWPPLG 64
Query: 151 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 330
K +ET SYLPPL++ Q+A +V+Y++ N W+PCLEF E + + E+ G YY
Sbjct: 65 LKKYETLSYLPPLTETQLAKEVEYLLRNKWVPCLEF-ELEHGFPYRENNRSPG-----YY 118
Query: 331 DNRYWTMWKLXMF 369
D RYWTMWKL MF
Sbjct: 119 DGRYWTMWKLPMF 131
Score = 31.6 bits (70), Expect(2) = 5e-19
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C K +P ++VR++
Sbjct: 129 PMFGCNDASQVLKELNECKKEYPQSWVRII 158
[206][TOP]
>UniRef100_Q9FUJ5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max
RepID=Q9FUJ5_SOYBN
Length = 178
Score = 90.5 bits (223), Expect(2) = 5e-19
Identities = 44/81 (54%), Positives = 51/81 (62%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E
Sbjct: 56 MQVWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSP 114
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 115 G-----YYDGRYWTMWKLPMF 130
Score = 27.3 bits (59), Expect(2) = 5e-19
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + A+P+ ++R++
Sbjct: 128 PMFGCTDASQVLKELQEAKTAYPNGFIRII 157
[207][TOP]
>UniRef100_Q9FUJ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max
RepID=Q9FUJ4_SOYBN
Length = 178
Score = 90.5 bits (223), Expect(2) = 5e-19
Identities = 44/81 (54%), Positives = 51/81 (62%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E
Sbjct: 56 MQVWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSP 114
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 115 G-----YYDGRYWTMWKLPMF 130
Score = 27.3 bits (59), Expect(2) = 5e-19
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + A+P+ ++R++
Sbjct: 128 PMFGCTDASQVLKELQEAKTAYPNGFIRII 157
[208][TOP]
>UniRef100_Q39832 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max
RepID=Q39832_SOYBN
Length = 178
Score = 90.5 bits (223), Expect(2) = 5e-19
Identities = 44/81 (54%), Positives = 51/81 (62%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E
Sbjct: 56 MQVWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSP 114
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 115 G-----YYDGRYWTMWKLPMF 130
Score = 27.3 bits (59), Expect(2) = 5e-19
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + A+P+ ++R++
Sbjct: 128 PMFGCTDASQVLKELQEAKTAYPNGFIRII 157
[209][TOP]
>UniRef100_P26667 Ribulose bisphosphate carboxylase small chain PW9, chloroplastic
n=1 Tax=Triticum aestivum RepID=RBS2_WHEAT
Length = 175
Score = 85.9 bits (211), Expect(2) = 5e-19
Identities = 47/124 (37%), Positives = 68/124 (54%), Gaps = 1/124 (0%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 177
V+A S+ + A + +S+ P++ + + V+ + M VW K FET SY
Sbjct: 5 VMASSATTVAPFQGLKSTAGLPISCRSGSTGLSSVSNGGRIRCMQVWPIEGIKKFETLSY 64
Query: 178 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 357
LPPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWK
Sbjct: 65 LPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWK 117
Query: 358 LXMF 369
L MF
Sbjct: 118 LPMF 121
Score = 32.0 bits (71), Expect(2) = 5e-19
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 119 PMFGCTDATQVLNEVEEVKKEYPDAYVRVI 148
[210][TOP]
>UniRef100_P00871 Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic
n=1 Tax=Triticum aestivum RepID=RBS1_WHEAT
Length = 174
Score = 85.9 bits (211), Expect(2) = 5e-19
Identities = 46/123 (37%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ + + V+ + M VW K FET SYL
Sbjct: 5 VMASSATTVAPFQGLKSTAGLPVSRRSRGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 64
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E ++ QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL
Sbjct: 65 PPLSTEALSKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 117
Query: 361 XMF 369
MF
Sbjct: 118 PMF 120
Score = 32.0 bits (71), Expect(2) = 5e-19
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 118 PMFGCTDATQVLNEVEEVKKEYPDAYVRVI 147
[211][TOP]
>UniRef100_Q2V327 Ribulose bisphosphate carboxylase small chain n=1 Tax=Arabidopsis
thaliana RepID=Q2V327_ARATH
Length = 174
Score = 85.5 bits (210), Expect(2) = 5e-19
Identities = 51/131 (38%), Positives = 68/131 (51%), Gaps = 13/131 (9%)
Frame = +1
Query: 16 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 156
S +A V PA+++ V P LK + A PV + + M VW P+ K
Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKK 65
Query: 157 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 336
FET SYLP LSD ++A +VDY++ N WIPC+EF + G+ YYD
Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEF------------ELEHGNTPG-YYDG 112
Query: 337 RYWTMWKLXMF 369
RYWTMWKL +F
Sbjct: 113 RYWTMWKLPLF 123
Score = 32.3 bits (72), Expect(2) = 5e-19
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C K +P A++R++
Sbjct: 121 PLFGCTDSAQVLKEVEECKKEYPGAFIRII 150
[212][TOP]
>UniRef100_Q9SNZ7 Ribulose bisphosphate carboxylase small chain (Fragment) n=2
Tax=Avena RepID=Q9SNZ7_9POAL
Length = 168
Score = 85.5 bits (210), Expect(2) = 5e-19
Identities = 46/123 (37%), Positives = 65/123 (52%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ S A + +S+ + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATSVAPFQELKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL
Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.3 bits (72), Expect(2) = 5e-19
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV++E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRII 143
[213][TOP]
>UniRef100_Q9SAW9 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Aegilops tauschii RepID=Q9SAW9_AEGTA
Length = 165
Score = 85.9 bits (211), Expect(2) = 5e-19
Identities = 46/123 (37%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ + + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL
Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGIVFREHNS-------SPGYYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.0 bits (71), Expect(2) = 5e-19
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVI 143
[214][TOP]
>UniRef100_Q9SAW8 Ribulose bisphosphate carboxylase small chain (Fragment) n=7
Tax=Triticeae RepID=Q9SAW8_TRITI
Length = 165
Score = 85.9 bits (211), Expect(2) = 5e-19
Identities = 46/123 (37%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ + + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL
Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.0 bits (71), Expect(2) = 5e-19
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVI 143
[215][TOP]
>UniRef100_Q9SAW7 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Triticum turgidum subsp. dicoccoides
RepID=Q9SAW7_TRITU
Length = 165
Score = 85.9 bits (211), Expect(2) = 5e-19
Identities = 46/123 (37%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ + + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVGRRSSGSLSSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL
Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.0 bits (71), Expect(2) = 5e-19
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVI 143
[216][TOP]
>UniRef100_Q9TLH3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Manihot
esculenta RepID=Q9TLH3_MANES
Length = 184
Score = 89.4 bits (220), Expect(2) = 7e-19
Identities = 43/81 (53%), Positives = 52/81 (64%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW K FET SYLPPLS EQ+A+++DY++ +GWIPCLEF E + +V
Sbjct: 60 MQVWPTRGKKKFETLSYLPPLSREQLASEIDYLLRSGWIPCLEF-ELEHGFVYRAHGSLP 118
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 119 G-----YYDGRYWTMWKLPMF 134
Score = 28.1 bits (61), Expect(2) = 7e-19
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + KA PD + R++
Sbjct: 132 PMFGCTDSSQVLKELDELIKAHPDGFARII 161
[217][TOP]
>UniRef100_P29684 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Hevea brasiliensis RepID=RBS_HEVBR
Length = 183
Score = 87.0 bits (214), Expect(2) = 7e-19
Identities = 42/81 (51%), Positives = 51/81 (62%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P K +ET SYLPPL+ EQ+A +V+Y++ GW+PCLEF E + V E
Sbjct: 60 MQVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEF-ELEHGTVYREYHRSP 118
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 119 G-----YYDGRYWTMWKLPMF 134
Score = 30.4 bits (67), Expect(2) = 7e-19
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + +QVL+E+ + KA+PD Y R++
Sbjct: 132 PMFGCTDAVQVLQELDEMIKAYPDCYGRII 161
[218][TOP]
>UniRef100_P00869 Ribulose bisphosphate carboxylase small chain 3C, chloroplastic n=1
Tax=Pisum sativum RepID=RBS2_PEA
Length = 180
Score = 92.0 bits (227), Expect(2) = 7e-19
Identities = 54/132 (40%), Positives = 71/132 (53%), Gaps = 13/132 (9%)
Frame = +1
Query: 13 SSVSAAVARPAR---SSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTPVNN 153
SS V+R +R ++V P LK P K +N M VW P+
Sbjct: 7 SSAVTTVSRASRGQSAAVAPFGGLKSMTGFPVKKVNTDITSITSNGGRVKCMQVWPPIGK 66
Query: 154 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 333
K FET SYLPPL+ +Q+ +V+Y++ GW+PCLEF E +K +V E + S YYD
Sbjct: 67 KKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEF-ELEKGFVYREH-----NKSPGYYD 120
Query: 334 NRYWTMWKLXMF 369
RYWTMWKL MF
Sbjct: 121 GRYWTMWKLPMF 132
Score = 25.4 bits (54), Expect(2) = 7e-19
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 389 QVLREIVDCTKAFPDAYVRLV 451
QVL+E+ + A+P A+VR++
Sbjct: 139 QVLKELDEVVAAYPQAFVRII 159
[219][TOP]
>UniRef100_C6T1Y2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max
RepID=C6T1Y2_SOYBN
Length = 178
Score = 90.1 bits (222), Expect(2) = 7e-19
Identities = 43/81 (53%), Positives = 51/81 (62%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+ K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E
Sbjct: 56 MQVWPPIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSP 114
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 115 G-----YYDGRYWTMWKLPMF 130
Score = 27.3 bits (59), Expect(2) = 7e-19
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + A+P+ ++R++
Sbjct: 128 PMFGCTDASQVLKELQEAKTAYPNGFIRII 157
[220][TOP]
>UniRef100_Q9FRZ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum
aestivum RepID=Q9FRZ4_WHEAT
Length = 175
Score = 85.9 bits (211), Expect(2) = 7e-19
Identities = 48/124 (38%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 177
V+A S+ S A + +S+ P++ V+ + M VW K FET SY
Sbjct: 5 VMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSY 64
Query: 178 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 357
LPPLS E + QVDY++ + W+PCLEF++ + R + S YYD RYWTMWK
Sbjct: 65 LPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMWK 117
Query: 358 LXMF 369
L MF
Sbjct: 118 LPMF 121
Score = 31.6 bits (70), Expect(2) = 7e-19
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV+ E+ + K +PDAYVR++
Sbjct: 119 PMFGCTDATQVINEVEEVKKEYPDAYVRII 148
[221][TOP]
>UniRef100_Q2QTJ7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Oryza sativa
Japonica Group RepID=Q2QTJ7_ORYSJ
Length = 175
Score = 84.0 bits (206), Expect(2) = 7e-19
Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 177
V+A S+ S A + +S+ P++ + V+ + + M VW K FET SY
Sbjct: 5 VMASSATSVAPFQGLKSTAGLPVSRRSNSAGLGSVSNGGRISCMQVWPIEGIKKFETLSY 64
Query: 178 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 357
LPPL+ E + Q++Y++ + W+PCLEF++ Y N S YYD RYWTMWK
Sbjct: 65 LPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR-------SPGYYDGRYWTMWK 117
Query: 358 LXMF 369
L MF
Sbjct: 118 LPMF 121
Score = 33.5 bits (75), Expect(2) = 7e-19
Identities = 13/30 (43%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + KA+PDA+VR++
Sbjct: 119 PMFGCTDATQVLKELEEAKKAYPDAFVRII 148
[222][TOP]
>UniRef100_Q9SP00 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena agadiriana RepID=Q9SP00_9POAL
Length = 168
Score = 85.1 bits (209), Expect(2) = 7e-19
Identities = 47/123 (38%), Positives = 67/123 (54%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ S A + +S+ + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS+E + Q+D+++ + W+PCLEF S ++ E +GS YYD RYWTMWKL
Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFRE----YGSTPG-YYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.3 bits (72), Expect(2) = 7e-19
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV++E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRII 143
[223][TOP]
>UniRef100_Q9SDY7 Ribulose bisphosphate carboxylase small chain (Fragment) n=2
Tax=Avena RepID=Q9SDY7_9POAL
Length = 168
Score = 85.1 bits (209), Expect(2) = 7e-19
Identities = 46/123 (37%), Positives = 65/123 (52%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ S A + +S+ + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL
Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.3 bits (72), Expect(2) = 7e-19
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV++E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRII 143
[224][TOP]
>UniRef100_Q9S7W0 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena strigosa RepID=Q9S7W0_9POAL
Length = 168
Score = 85.1 bits (209), Expect(2) = 7e-19
Identities = 46/123 (37%), Positives = 65/123 (52%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ S A + +S+ + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL
Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.3 bits (72), Expect(2) = 7e-19
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV++E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDASQVIKEVEEVKKKYPDAYVRII 143
[225][TOP]
>UniRef100_Q9SAX6 Ribulose bisphosphate carboxylase small chain (Fragment) n=3
Tax=Triticeae RepID=Q9SAX6_WHEAT
Length = 165
Score = 85.5 bits (210), Expect(2) = 7e-19
Identities = 46/123 (37%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ + + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSGSLGRVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL
Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.0 bits (71), Expect(2) = 7e-19
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVI 143
[226][TOP]
>UniRef100_Q9SAX1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Aegilops bicornis RepID=Q9SAX1_AEGBI
Length = 164
Score = 85.5 bits (210), Expect(2) = 7e-19
Identities = 47/123 (38%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ S A + +S+ + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATSVAPFQGLKSTGGLPVSRRSRGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E + QVDY++ + W+PCLEF++ + + S S YYD+RYWTMWKL
Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDSRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.0 bits (71), Expect(2) = 7e-19
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVI 143
[227][TOP]
>UniRef100_A9T3X7 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9T3X7_PHYPA
Length = 179
Score = 96.7 bits (239), Expect = 7e-19
Identities = 60/163 (36%), Positives = 82/163 (50%), Gaps = 7/163 (4%)
Frame = +1
Query: 4 IAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP-------AQANQMMVWTPVNNKMF 162
I ++ A+V R + SSV+ + LK +A A ++ M VW P+ F
Sbjct: 10 IVAAASPASVCRES-SSVKQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKF 68
Query: 163 ETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRY 342
ETFSYLPPL+D+QIA QVD+++ IPC+EF +N S G S YYD RY
Sbjct: 69 ETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFS----GPGSSGYYDGRY 124
Query: 343 WTMWKLXMFVLR*THAGAARDRRLHQGLPRCLRAPGGFESRSR 471
WTMWKL MF + + Q P C GF+S+ +
Sbjct: 125 WTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQ 167
[228][TOP]
>UniRef100_P07689 Ribulose bisphosphate carboxylase small chain 3A, chloroplastic n=1
Tax=Pisum sativum RepID=RBS3_PEA
Length = 180
Score = 91.7 bits (226), Expect(2) = 9e-19
Identities = 42/81 (51%), Positives = 54/81 (66%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW P+ K FET SYLPPL+ +Q+ +V+Y++ GW+PCLEF E +K +V E
Sbjct: 58 MQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEF-ELEKGFVYREH---- 112
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
+ S YYD RYWTMWKL MF
Sbjct: 113 -NKSPGYYDGRYWTMWKLPMF 132
Score = 25.4 bits (54), Expect(2) = 9e-19
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +2
Query: 389 QVLREIVDCTKAFPDAYVRLV 451
QVL+E+ + A+P A+VR++
Sbjct: 139 QVLKELDEVVAAYPQAFVRII 159
[229][TOP]
>UniRef100_Q43874 Ribulose bisphosphate carboxylase small chain n=1 Tax=Phaseolus
vulgaris RepID=Q43874_PHAVU
Length = 180
Score = 89.0 bits (219), Expect(2) = 9e-19
Identities = 42/81 (51%), Positives = 53/81 (65%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
+ VW V K FET SYLPPL+ +Q+A +VDY++ GW+PCLEF E + +V E
Sbjct: 58 IQVWPTVGKKKFETLSYLPPLTKQQLAKEVDYLLRKGWVPCLEF-ELEHGFVYREH---- 112
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
+ S YYD RYWTMWKL MF
Sbjct: 113 -NKSPGYYDGRYWTMWKLPMF 132
Score = 28.1 bits (61), Expect(2) = 9e-19
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + A PD ++R++
Sbjct: 130 PMFGCTDSSQVLKELYEAQTAHPDGFIRII 159
[230][TOP]
>UniRef100_Q9ZSS5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena sterilis subsp. ludoviciana RepID=Q9ZSS5_9POAL
Length = 168
Score = 84.7 bits (208), Expect(2) = 9e-19
Identities = 44/123 (35%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ S A + +S+ + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPL++E + Q+D+++ + W+PCLEF++ ++ E G YYD RYWTMWKL
Sbjct: 61 PPLTEEALLKQIDFLIRSKWVPCLEFSQG--GFIFREHGSTPG-----YYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.3 bits (72), Expect(2) = 9e-19
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV++E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRII 143
[231][TOP]
>UniRef100_Q9ZWG9 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Triticum timopheevii subsp. armeniacum
RepID=Q9ZWG9_TRITI
Length = 165
Score = 85.5 bits (210), Expect(2) = 9e-19
Identities = 46/123 (37%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ + + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSGSLGRVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL
Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 31.6 bits (70), Expect(2) = 9e-19
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDATQVLSEVEEVKKEYPDAYVRVI 143
[232][TOP]
>UniRef100_Q9SAX3 Ribulose bisphosphate carboxylase small chain (Fragment) n=2
Tax=Aegilops speltoides RepID=Q9SAX3_AEGSP
Length = 165
Score = 85.5 bits (210), Expect(2) = 9e-19
Identities = 46/123 (37%), Positives = 65/123 (52%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVGRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL
Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 31.6 bits (70), Expect(2) = 9e-19
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDATQVLSEVEEVKKEYPDAYVRVI 143
[233][TOP]
>UniRef100_Q9ZWG3 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Triticum urartu RepID=Q9ZWG3_9POAL
Length = 165
Score = 85.1 bits (209), Expect(2) = 9e-19
Identities = 46/123 (37%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ + + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL
Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHYS-------SPGYYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.0 bits (71), Expect(2) = 9e-19
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVI 143
[234][TOP]
>UniRef100_A1YMW8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica rapa
RepID=A1YMW8_BRACM
Length = 162
Score = 86.3 bits (212), Expect(2) = 9e-19
Identities = 47/120 (39%), Positives = 65/120 (54%)
Frame = +1
Query: 10 KSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPL 189
KSS + V R A + + + V+ + + M VW PV K FET SYLP L
Sbjct: 9 KSSSAFPVTRKANNDITSI-----------VSNGGRVSCMKVWPPVGKKKFETLSYLPDL 57
Query: 190 SDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLXMF 369
++ ++ +VDY++ N WIPC+EF E + +V E G YYD RYWTMWKL +F
Sbjct: 58 TEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDGRYWTMWKLPLF 111
Score = 30.8 bits (68), Expect(2) = 9e-19
Identities = 10/30 (33%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ +C +P+A++R++
Sbjct: 109 PLFGCTDSAQVLKEVQECKTEYPNAFIRII 138
[235][TOP]
>UniRef100_Q7DM38 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Phaseolus vulgaris RepID=Q7DM38_PHAVU
Length = 135
Score = 89.0 bits (219), Expect(2) = 9e-19
Identities = 42/81 (51%), Positives = 53/81 (65%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
+ VW V K FET SYLPPL+ +Q+A +VDY++ GW+PCLEF E + +V E
Sbjct: 13 IQVWPTVGKKKFETLSYLPPLTKQQLAKEVDYLLRKGWVPCLEF-ELEHGFVYREH---- 67
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
+ S YYD RYWTMWKL MF
Sbjct: 68 -NKSPGYYDGRYWTMWKLPMF 87
Score = 28.1 bits (61), Expect(2) = 9e-19
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + A PD ++R++
Sbjct: 85 PMFGCTDSSQVLKELYEAQTAHPDGFIRII 114
[236][TOP]
>UniRef100_A9TT85 Ribulose bisphosphate carboxylase small chain n=1
Tax=Physcomitrella patens subsp. patens
RepID=A9TT85_PHYPA
Length = 183
Score = 96.3 bits (238), Expect = 1e-18
Identities = 61/163 (37%), Positives = 80/163 (49%), Gaps = 12/163 (7%)
Frame = +1
Query: 19 VSAAVARPAR-----SSVRPMAALKPAVKAAPVAAPAQANQ-------MMVWTPVNNKMF 162
VS A A PA +SV+ + LK A + A + Q M VW P+ F
Sbjct: 13 VSLAAASPAAVSRDSTSVKAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKF 72
Query: 163 ETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRY 342
ETFSYLPPL+D++IA QVDY++ IPC+EF +N S G+ S YYD RY
Sbjct: 73 ETFSYLPPLTDDEIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFS----GAGSSGYYDGRY 128
Query: 343 WTMWKLXMFVLR*THAGAARDRRLHQGLPRCLRAPGGFESRSR 471
WTMWKL MF + + P C GF+S+ +
Sbjct: 129 WTMWKLPMFGCTDSSQVLREIQECKTQFPSCWVRVLGFDSKKQ 171
[237][TOP]
>UniRef100_Q9SAW6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Triticum aestivum RepID=Q9SAW6_WHEAT
Length = 165
Score = 85.9 bits (211), Expect(2) = 1e-18
Identities = 46/123 (37%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ + + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVGRRSSGSLSSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL
Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 30.8 bits (68), Expect(2) = 1e-18
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDATQVLIEVEEVKKEYPDAYVRVI 143
[238][TOP]
>UniRef100_Q9ZWG2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Bromus catharticus RepID=Q9ZWG2_BROCA
Length = 164
Score = 84.7 bits (208), Expect(2) = 1e-18
Identities = 46/123 (37%), Positives = 67/123 (54%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ S A + +S+ + + + V++ + M VW K FET SYL
Sbjct: 1 VMASSATSVAPFQGLKSTAG-LPVSRRSTGLGSVSSGGRIRCMQVWPIEGIKKFETLSYL 59
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E + Q+DY++ + W+PCLEF++ + R + S YYD RYWTMWKL
Sbjct: 60 PPLSTEALLKQIDYLIRSKWVPCLEFSKVGFVF-------REHNASPGYYDGRYWTMWKL 112
Query: 361 XMF 369
MF
Sbjct: 113 PMF 115
Score = 32.0 bits (71), Expect(2) = 1e-18
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV++E+ + K +PDAYVR++
Sbjct: 113 PMFGCTDASQVIKELEEVKKEYPDAYVRII 142
[239][TOP]
>UniRef100_Q42915 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Manihot esculenta RepID=RBS_MANES
Length = 182
Score = 89.0 bits (219), Expect(2) = 1e-18
Identities = 44/81 (54%), Positives = 54/81 (66%)
Frame = +1
Query: 127 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 306
M VW + K FET SYLPPL+ EQ+A++V+Y++ +GWIPCLEF E + V E A
Sbjct: 60 MKVWPTLGMKKFETLSYLPPLTREQLASEVEYLLRSGWIPCLEF-ELEHGLVYREHARVP 118
Query: 307 GSVSCLYYDNRYWTMWKLXMF 369
G YYD RYWTMWKL MF
Sbjct: 119 G-----YYDGRYWTMWKLPMF 134
Score = 27.3 bits (59), Expect(2) = 1e-18
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ + K PD Y R++
Sbjct: 132 PMFGCTDAAQVLKELDELIKHHPDGYARII 161
[240][TOP]
>UniRef100_O64416 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1
Tax=Marchantia paleacea RepID=RBS_MARPA
Length = 180
Score = 94.0 bits (232), Expect(2) = 1e-18
Identities = 51/130 (39%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAV-------KAAPVAAPAQANQMMVWTPVNNKM 159
V+ + SAA + V A LK V + ++ + M VW P NN
Sbjct: 10 VVTPFAASAASTTKSSQIVSVQAGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNNLK 69
Query: 160 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 339
FET SYLPPLS + +A Q+DY++ +GW PC+EF + R GS YYD R
Sbjct: 70 FETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQG-------TVTREGSTMPGYYDGR 122
Query: 340 YWTMWKLXMF 369
YWTMWKL MF
Sbjct: 123 YWTMWKLPMF 132
Score = 22.3 bits (46), Expect(2) = 1e-18
Identities = 11/29 (37%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAF-PDAYVR 445
P C + VLREI +C K + Y+R
Sbjct: 130 PMFGCTDSASVLREIEECKKLYGKKCYIR 158
[241][TOP]
>UniRef100_A9XP95 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Sonneratia ovata RepID=A9XP95_9MYRT
Length = 178
Score = 88.6 bits (218), Expect(2) = 1e-18
Identities = 55/132 (41%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Frame = +1
Query: 13 SSVSAAVAR--PARSSVR-PMAALKPAV------KAAPVAAPA----QANQMMVWTPVNN 153
SS + AV R PA++S+ P LK + K A + + A + M VW P
Sbjct: 2 SSATMAVNRTAPAQASMAAPFTGLKSSSAFPTTRKTADITSLASNGGRVQCMQVWPPEGL 61
Query: 154 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 333
K FET SYLP L+ EQ+ +++Y++ NGW PCLEF+ AY E+ G YYD
Sbjct: 62 KKFETLSYLPDLTREQLIKEIEYLIRNGWFPCLEFSCPAFAYPYRENHRSPG-----YYD 116
Query: 334 NRYWTMWKLXMF 369
RYWTMWKL MF
Sbjct: 117 GRYWTMWKLPMF 128
Score = 27.7 bits (60), Expect(2) = 1e-18
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKA 463
P C +P+QV++E+ + KA+P + R+ A
Sbjct: 126 PMFGCTDPIQVIKELDEGIKAYPTYFFRIAGFSA 159
[242][TOP]
>UniRef100_A9XP20 Ribulose bisphosphate carboxylase small chain (Fragment) n=2
Tax=Sonneratia alba RepID=A9XP20_9MYRT
Length = 178
Score = 88.6 bits (218), Expect(2) = 1e-18
Identities = 55/132 (41%), Positives = 72/132 (54%), Gaps = 13/132 (9%)
Frame = +1
Query: 13 SSVSAAVAR--PARSS-VRPMAALKPAV------KAAPVAAPA----QANQMMVWTPVNN 153
SS + AV R PA++S V P LK + K A + + A + M VW P
Sbjct: 2 SSATMAVNRTAPAQASMVAPFTGLKSSSAFPTTRKTADITSLASNGGRVQCMQVWPPEGL 61
Query: 154 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 333
K FET SYLP L+ EQ+ +++Y++ NGW PCLEF+ AY E+ G YYD
Sbjct: 62 KKFETLSYLPDLTREQLIKEIEYLIRNGWFPCLEFSCPAFAYPYRENHRSPG-----YYD 116
Query: 334 NRYWTMWKLXMF 369
RYWTMWKL M+
Sbjct: 117 GRYWTMWKLPMY 128
Score = 27.7 bits (60), Expect(2) = 1e-18
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLVASKA 463
P C +P+QV++E+ + KA+P + R+ A
Sbjct: 126 PMYGCTDPIQVIKELDEGIKAYPTYFFRIAGFSA 159
[243][TOP]
>UniRef100_Q9ZRS5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Secale
cereale RepID=Q9ZRS5_SECCE
Length = 175
Score = 84.7 bits (208), Expect(2) = 1e-18
Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 177
V+A S+ S A + +S+ P++ V+ + M VW K FET SY
Sbjct: 5 VMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSY 64
Query: 178 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 357
LPPL+ E + QVDY++ + W+PCLEF++ + R + S YYD RYWTMWK
Sbjct: 65 LPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMWK 117
Query: 358 LXMF 369
L MF
Sbjct: 118 LPMF 121
Score = 31.6 bits (70), Expect(2) = 1e-18
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV+ E+ + K +PDAYVR++
Sbjct: 119 PMFGCTDATQVINEVEEVKKEYPDAYVRII 148
[244][TOP]
>UniRef100_O22487 Ribulose bisphosphate carboxylase small chain n=1 Tax=Oryza sativa
RepID=O22487_ORYSA
Length = 175
Score = 81.3 bits (199), Expect(2) = 1e-18
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 177
V+A S+ S A + +S+ P++ V+ + M VW K FET SY
Sbjct: 5 VMASSATSVAPFQGLKSTAGLPVSRRSTNSGFGNVSNGGRIKCMQVWPIEGIKKFETLSY 64
Query: 178 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 357
LPPL+ E + Q++Y++ + W+PCLEF++ Y N S YYD RYWTMWK
Sbjct: 65 LPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR-------SPGYYDGRYWTMWK 117
Query: 358 LXMF 369
L MF
Sbjct: 118 LPMF 121
Score = 35.0 bits (79), Expect(2) = 1e-18
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL+E+ D KA+PDA+VR++
Sbjct: 119 PMFGCTDATQVLKELEDAKKAYPDAFVRII 148
[245][TOP]
>UniRef100_Q575T3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum
turgidum subsp. durum RepID=Q575T3_TRITU
Length = 170
Score = 84.3 bits (207), Expect(2) = 1e-18
Identities = 47/123 (38%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Frame = +1
Query: 4 IAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
+A S+ S A + +S+ P++ + + V+ + M VW K FET SYL
Sbjct: 1 MASSATSVAPFQGLKSTDGLPISRRSSSAGLSSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL
Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.0 bits (71), Expect(2) = 1e-18
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVI 143
[246][TOP]
>UniRef100_Q9ZSK0 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena vaviloviana RepID=Q9ZSK0_9POAL
Length = 168
Score = 84.0 bits (206), Expect(2) = 1e-18
Identities = 45/123 (36%), Positives = 65/123 (52%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ + A + +S+ + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL
Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.3 bits (72), Expect(2) = 1e-18
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV++E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRII 143
[247][TOP]
>UniRef100_Q9SBU5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Avena sterilis subsp. ludoviciana RepID=Q9SBU5_9POAL
Length = 168
Score = 84.0 bits (206), Expect(2) = 1e-18
Identities = 45/123 (36%), Positives = 65/123 (52%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
V+A S+ S A + +S+ + + V+ + M VW K FET SYL
Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPL++E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL
Sbjct: 61 PPLTEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.3 bits (72), Expect(2) = 1e-18
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QV++E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRII 143
[248][TOP]
>UniRef100_Q9ZWG7 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Secale cereale RepID=Q9ZWG7_SECCE
Length = 165
Score = 84.3 bits (207), Expect(2) = 1e-18
Identities = 45/123 (36%), Positives = 66/123 (53%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 180
++A S+ + A + +S+ + + + V+ + M VW K FET SYL
Sbjct: 1 MMASSATTVAPFQGLKSTAGLPVSRRSSGSLGNVSNGGRIRCMQVWPIEGIKKFETLSYL 60
Query: 181 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 360
PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL
Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113
Query: 361 XMF 369
MF
Sbjct: 114 PMF 116
Score = 32.0 bits (71), Expect(2) = 1e-18
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + QVL E+ + K +PDAYVR++
Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVI 143
[249][TOP]
>UniRef100_Q106Y5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Musa acuminata RepID=Q106Y5_MUSAC
Length = 161
Score = 84.0 bits (206), Expect(2) = 1e-18
Identities = 54/136 (39%), Positives = 71/136 (52%), Gaps = 13/136 (9%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMVWT 141
++ S+ + + A PA+SS V P LK + A V A A+ M VW
Sbjct: 3 MMVSSAATVSRASPAQSSMVAPFTGLK-STSAFRVTRKANADLSHLPSNGGRVQCMKVWP 61
Query: 142 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 321
K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G
Sbjct: 62 IEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVWRENHRSPG---- 115
Query: 322 LYYDNRYWTMWKLXMF 369
YYD RYWTMWKL MF
Sbjct: 116 -YYDGRYWTMWKLPMF 130
Score = 32.3 bits (72), Expect(2) = 1e-18
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + +QV++E+ +C K +P A+VR++
Sbjct: 128 PMFGCTDAVQVVKEVEECKKEYPKAFVRII 157
[250][TOP]
>UniRef100_Q107B5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1
Tax=Musa balbisiana RepID=Q107B5_MUSBA
Length = 161
Score = 82.8 bits (203), Expect(2) = 1e-18
Identities = 54/136 (39%), Positives = 68/136 (50%), Gaps = 13/136 (9%)
Frame = +1
Query: 1 VIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMVWT 141
++ S+ + PA+SS V P LK A A PV A+ M VW
Sbjct: 3 MMVSSAATFTRVSPAQSSMVAPFTGLKSA-SAFPVTRKPNADLSHLPSNGGRVQCMKVWP 61
Query: 142 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 321
K FET SYLP L DE + Q++Y++ + WIPCLEF K +V E+ G
Sbjct: 62 IEGLKKFETLSYLPTLKDEALLKQIEYLLRSKWIPCLEFC--PKGFVWRENHRSPG---- 115
Query: 322 LYYDNRYWTMWKLXMF 369
YYD RYWTMWKL MF
Sbjct: 116 -YYDGRYWTMWKLPMF 130
Score = 33.5 bits (75), Expect(2) = 1e-18
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 362 PCSCCGEPMQVLREIVDCTKAFPDAYVRLV 451
P C + +QV +E+ +C K +PDA++R++
Sbjct: 128 PMFGCTDAVQVAKELEECKKEYPDAFIRII 157