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[1][TOP] >UniRef100_A8I003 Ycf32-related subunit of photosystem II n=1 Tax=Chlamydomonas reinhardtii RepID=A8I003_CHLRE Length = 260 Score = 199 bits (505), Expect(2) = 2e-63 Identities = 105/108 (97%), Positives = 106/108 (98%) Frame = +3 Query: 177 AQASEEQLGFKVGTVATLSSVAASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGW 356 AQASEEQLGFKVGTVATLSSVAASWMMAGNAQAATELASLA SDNRAGILATLLVPVLGW Sbjct: 38 AQASEEQLGFKVGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGW 97 Query: 357 VGFNIFGSLQAQLNQMDAKNKRAVPDAVGMGAAASLLYAQSAEASTEI 500 VGFNIFGSLQAQLNQMDAKNKRAVP AVGMGAAASLL+AQSAEASTEI Sbjct: 98 VGFNIFGSLQAQLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEI 145 Score = 67.4 bits (163), Expect(2) = 2e-63 Identities = 36/36 (100%), Positives = 36/36 (100%) Frame = +2 Query: 65 MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVV 172 MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVV Sbjct: 1 MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVV 36 Score = 139 bits (351), Expect = 8e-32 Identities = 72/87 (82%), Positives = 80/87 (91%) Frame = +3 Query: 240 AASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 419 AAS + A +A+A+TE+A+LA SDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 130 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVMGWVGFNIFGSLQAQLNQMDAKNK 189 Query: 420 RAVPDAVGMGAAASLLYAQSAEASTEI 500 RAVP AVGMGAAASLL+AQSAEASTEI Sbjct: 190 RAVPAAVGMGAAASLLFAQSAEASTEI 216 Score = 94.0 bits (232), Expect = 5e-18 Identities = 46/60 (76%), Positives = 54/60 (90%) Frame = +3 Query: 240 AASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 419 AAS + A +A+A+TE+A+LA SDNR ILATLLVPV+GWVGFNIFGSLQAQL+QMDAKNK Sbjct: 201 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLSQMDAKNK 260 [2][TOP] >UniRef100_A8JKA1 Ycf32-related polyprotein of photosystem II (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8JKA1_CHLRE Length = 354 Score = 178 bits (452), Expect = 2e-43 Identities = 94/97 (96%), Positives = 95/97 (97%) Frame = +3 Query: 210 VGTVATLSSVAASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQA 389 VGTVATLSSVAASWMMAGNAQAATELASLA SDNRAGILATLLVPVLGWVGFNIFGSLQA Sbjct: 1 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 60 Query: 390 QLNQMDAKNKRAVPDAVGMGAAASLLYAQSAEASTEI 500 QLNQMDAKNKRAVP AVGMGAAASLL+AQSAEASTEI Sbjct: 61 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEI 97 Score = 139 bits (351), Expect = 8e-32 Identities = 72/87 (82%), Positives = 80/87 (91%) Frame = +3 Query: 240 AASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 419 AAS + A +A+A+TE+A+LA SDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 82 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 141 Query: 420 RAVPDAVGMGAAASLLYAQSAEASTEI 500 RAVP AVGMGAAASLL+AQSAEASTEI Sbjct: 142 RAVPAAVGMGAAASLLFAQSAEASTEI 168 Score = 139 bits (351), Expect = 8e-32 Identities = 72/87 (82%), Positives = 80/87 (91%) Frame = +3 Query: 240 AASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 419 AAS + A +A+A+TE+A+LA SDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 153 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 212 Query: 420 RAVPDAVGMGAAASLLYAQSAEASTEI 500 RAVP AVGMGAAASLL+AQSAEASTEI Sbjct: 213 RAVPAAVGMGAAASLLFAQSAEASTEI 239 Score = 139 bits (351), Expect = 8e-32 Identities = 72/87 (82%), Positives = 80/87 (91%) Frame = +3 Query: 240 AASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 419 AAS + A +A+A+TE+A+LA SDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 224 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 283 Query: 420 RAVPDAVGMGAAASLLYAQSAEASTEI 500 RAVP AVGMGAAASLL+AQSAEASTEI Sbjct: 284 RAVPAAVGMGAAASLLFAQSAEASTEI 310 Score = 93.6 bits (231), Expect = 6e-18 Identities = 46/60 (76%), Positives = 53/60 (88%) Frame = +3 Query: 240 AASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 419 AAS + A +A+A+TE+A+LA SDNR ILATLLVPV+GWVGFNIFGSLQAQL QMDAKNK Sbjct: 295 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLRQMDAKNK 354 [3][TOP] >UniRef100_C1E7Y4 Photosystem II PsbY protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E7Y4_9CHLO Length = 191 Score = 61.2 bits (147), Expect = 3e-08 Identities = 41/90 (45%), Positives = 50/90 (55%), Gaps = 2/90 (2%) Frame = +3 Query: 234 SVAASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQM--D 407 S AA M A AATE LA D R I VPVLGWVG+NI G QL +M D Sbjct: 56 SAAALMGMPEAADAATEAMQLADLDARIAIFGAF-VPVLGWVGYNILGPGLKQLEKMQQD 114 Query: 408 AKNKRAVPDAVGMGAAASLLYAQSAEASTE 497 A K+ V VG+ AAA + ++A+A+TE Sbjct: 115 AAKKKGVAAGVGLSAAALMGMPEAADAATE 144 [4][TOP] >UniRef100_A9U315 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U315_PHYPA Length = 137 Score = 60.1 bits (144), Expect = 8e-08 Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 1/97 (1%) Frame = +3 Query: 210 VGTVATLSSVAASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQA 389 V V T ++ A+ + +A A+ ++ +LA DNR L L+P +GWV FNI LQ Sbjct: 2 VNLVCTTGAMFAAMATSESAMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNI---LQP 58 Query: 390 QLNQMD-AKNKRAVPDAVGMGAAASLLYAQSAEASTE 497 LNQ+D + +A+ G+GAAA+L+ A A+A+ E Sbjct: 59 ALNQVDKMRGAKALVAGAGLGAAATLMAAPHADAAQE 95 [5][TOP] >UniRef100_A9SPH7 PsbY photosystem II polypeptide n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPH7_PHYPA Length = 368 Score = 57.8 bits (138), Expect = 4e-07 Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 12/109 (11%) Frame = +3 Query: 207 KVGTVATLSSVAASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQ 386 K G + L AS +A +A AA E+A+LA SD+R I+ LL+P +GWV FNI Sbjct: 205 KRGVIGALGLGTASLFLAPHADAAQEIATLADSDSRGLIIIGLLLPAVGWVLFNILKPAL 264 Query: 387 AQLNQMDAKNKRAVP-----------DAVGMGAAA-SLLYAQSAEASTE 497 Q+N + N P A G+ AAA SLL A A+A + Sbjct: 265 NQINNIVEGNDTGAPVKRGKKFGGMIGATGISAAAMSLLAAPKADAQVQ 313 Score = 54.7 bits (130), Expect = 3e-06 Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 1/119 (0%) Frame = +3 Query: 147 AARCAPWSSCAQASEEQLGFKVGTVATLSSVAASWMMAGNAQAATELASLACSDNRAGIL 326 A CA S+ + +Q+ VG A ++ A+ + +A A+ ++ +LA DNR L Sbjct: 42 AVPCAKLSTSSDGVAQQIS--VGANALAGAMFAAMATSESALASQQIMALAEGDNRVVAL 99 Query: 327 ATLLVPVLGWVGFNIFGSLQAQLNQMD-AKNKRAVPDAVGMGAAASLLYAQSAEASTEI 500 LVP +GWV FNI L+ LNQ+D K +++ G+GA A L+ A A+A+ EI Sbjct: 100 LIPLVPAIGWVLFNI---LKPALNQVDKMKAAKSLVAGAGLGALA-LVAAPHADAAQEI 154 Score = 53.1 bits (126), Expect = 1e-05 Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 7/94 (7%) Frame = +3 Query: 240 AASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNI-------FGSLQAQLN 398 A + + A +A AA E+A +A SD R I+ LL+P +GWV FNI +Q Q N Sbjct: 139 ALALVAAPHADAAQEIAQVADSDARGLIIIGLLLPAVGWVLFNILRPALNQIEKMQDQGN 198 Query: 399 QMDAKNKRAVPDAVGMGAAASLLYAQSAEASTEI 500 KR V A+G+G ASL A A+A+ EI Sbjct: 199 AAAITRKRGVIGALGLG-TASLFLAPHADAAQEI 231 [6][TOP] >UniRef100_C1MZ88 Photosystem II PsbY protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MZ88_9CHLO Length = 279 Score = 56.2 bits (134), Expect = 1e-06 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 4/115 (3%) Frame = +3 Query: 168 SSCAQASEEQLGFKVGTVATLSSVAASWMMAGNAQAATE-LASLACSDNRAGILATLLVP 344 S+ A A + ++G A L+ A + A AA+E L+ +A D+RA I +L P Sbjct: 46 SASAAAESQTDDLQLGQTAALTLAGALALGTEQASAASESLSQVAGFDSRALIFLGILGP 105 Query: 345 VLGWVGFNIFGSLQAQLNQMDAKN---KRAVPDAVGMGAAASLLYAQSAEASTEI 500 +GWV +NI Q N M KN K+ +P +G+ AAA + A+A+TE+ Sbjct: 106 AIGWVLYNILTPGLNQFNSMQEKNARGKKGIPLGLGLSAAALAGMPEQADAATEL 160 [7][TOP] >UniRef100_Q1YN63 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YN63_MOBAS Length = 172 Score = 53.5 bits (127), Expect = 7e-06 Identities = 49/151 (32%), Positives = 62/151 (41%), Gaps = 7/151 (4%) Frame = -3 Query: 471 RTAERQRRPCRRRRAQRACSWRPSGSAAPAESRRC*SRPSPGPAP---AGSPGYPRGCRC 301 RT R C RRRA A SWRP G A+ R AP +GSP P Sbjct: 2 RTRSRTGARCARRRATAAASWRPCGPASRDRPRWTWCAGPRRAAPSSRSGSPPIPTRPAR 61 Query: 300 RPGTQAQWQPGHC----QPSSTRQRRTTGWQRCRP*SPAAPR*PGHRTTTERTARRTGST 133 P W PG C +P RQRR G R RP + + R + RR + Sbjct: 62 SPMATTSWSPG-CRSPPRPCHRRQRRHPG--RSRPTNGISRRNRDRVSEPNAQRRRAVAI 118 Query: 132 GLALRTLERSAAEVGADMRRAAILTSLGRQR 40 G+A RT + A MRR + ++G +R Sbjct: 119 GVATRTGDAERA-----MRRRCLAAAIGARR 144