BP091674 ( MX242e04_r )

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[1][TOP]
>UniRef100_A8I003 Ycf32-related subunit of photosystem II n=1 Tax=Chlamydomonas
           reinhardtii RepID=A8I003_CHLRE
          Length = 260

 Score =  199 bits (505), Expect(2) = 2e-63
 Identities = 105/108 (97%), Positives = 106/108 (98%)
 Frame = +3

Query: 177 AQASEEQLGFKVGTVATLSSVAASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGW 356
           AQASEEQLGFKVGTVATLSSVAASWMMAGNAQAATELASLA SDNRAGILATLLVPVLGW
Sbjct: 38  AQASEEQLGFKVGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGW 97

Query: 357 VGFNIFGSLQAQLNQMDAKNKRAVPDAVGMGAAASLLYAQSAEASTEI 500
           VGFNIFGSLQAQLNQMDAKNKRAVP AVGMGAAASLL+AQSAEASTEI
Sbjct: 98  VGFNIFGSLQAQLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEI 145

 Score = 67.4 bits (163), Expect(2) = 2e-63
 Identities = 36/36 (100%), Positives = 36/36 (100%)
 Frame = +2

Query: 65  MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVV 172
           MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVV
Sbjct: 1   MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVV 36

 Score =  139 bits (351), Expect = 8e-32
 Identities = 72/87 (82%), Positives = 80/87 (91%)
 Frame = +3

Query: 240 AASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 419
           AAS + A +A+A+TE+A+LA SDNR  ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 130 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVMGWVGFNIFGSLQAQLNQMDAKNK 189

Query: 420 RAVPDAVGMGAAASLLYAQSAEASTEI 500
           RAVP AVGMGAAASLL+AQSAEASTEI
Sbjct: 190 RAVPAAVGMGAAASLLFAQSAEASTEI 216

 Score = 94.0 bits (232), Expect = 5e-18
 Identities = 46/60 (76%), Positives = 54/60 (90%)
 Frame = +3

Query: 240 AASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 419
           AAS + A +A+A+TE+A+LA SDNR  ILATLLVPV+GWVGFNIFGSLQAQL+QMDAKNK
Sbjct: 201 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLSQMDAKNK 260

[2][TOP]
>UniRef100_A8JKA1 Ycf32-related polyprotein of photosystem II (Fragment) n=1
           Tax=Chlamydomonas reinhardtii RepID=A8JKA1_CHLRE
          Length = 354

 Score =  178 bits (452), Expect = 2e-43
 Identities = 94/97 (96%), Positives = 95/97 (97%)
 Frame = +3

Query: 210 VGTVATLSSVAASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQA 389
           VGTVATLSSVAASWMMAGNAQAATELASLA SDNRAGILATLLVPVLGWVGFNIFGSLQA
Sbjct: 1   VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 60

Query: 390 QLNQMDAKNKRAVPDAVGMGAAASLLYAQSAEASTEI 500
           QLNQMDAKNKRAVP AVGMGAAASLL+AQSAEASTEI
Sbjct: 61  QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEI 97

 Score =  139 bits (351), Expect = 8e-32
 Identities = 72/87 (82%), Positives = 80/87 (91%)
 Frame = +3

Query: 240 AASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 419
           AAS + A +A+A+TE+A+LA SDNR  ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 82  AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 141

Query: 420 RAVPDAVGMGAAASLLYAQSAEASTEI 500
           RAVP AVGMGAAASLL+AQSAEASTEI
Sbjct: 142 RAVPAAVGMGAAASLLFAQSAEASTEI 168

 Score =  139 bits (351), Expect = 8e-32
 Identities = 72/87 (82%), Positives = 80/87 (91%)
 Frame = +3

Query: 240 AASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 419
           AAS + A +A+A+TE+A+LA SDNR  ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 153 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 212

Query: 420 RAVPDAVGMGAAASLLYAQSAEASTEI 500
           RAVP AVGMGAAASLL+AQSAEASTEI
Sbjct: 213 RAVPAAVGMGAAASLLFAQSAEASTEI 239

 Score =  139 bits (351), Expect = 8e-32
 Identities = 72/87 (82%), Positives = 80/87 (91%)
 Frame = +3

Query: 240 AASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 419
           AAS + A +A+A+TE+A+LA SDNR  ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 224 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 283

Query: 420 RAVPDAVGMGAAASLLYAQSAEASTEI 500
           RAVP AVGMGAAASLL+AQSAEASTEI
Sbjct: 284 RAVPAAVGMGAAASLLFAQSAEASTEI 310

 Score = 93.6 bits (231), Expect = 6e-18
 Identities = 46/60 (76%), Positives = 53/60 (88%)
 Frame = +3

Query: 240 AASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 419
           AAS + A +A+A+TE+A+LA SDNR  ILATLLVPV+GWVGFNIFGSLQAQL QMDAKNK
Sbjct: 295 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLRQMDAKNK 354

[3][TOP]
>UniRef100_C1E7Y4 Photosystem II PsbY protein n=1 Tax=Micromonas sp. RCC299
           RepID=C1E7Y4_9CHLO
          Length = 191

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 41/90 (45%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
 Frame = +3

Query: 234 SVAASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQM--D 407
           S AA   M   A AATE   LA  D R  I     VPVLGWVG+NI G    QL +M  D
Sbjct: 56  SAAALMGMPEAADAATEAMQLADLDARIAIFGAF-VPVLGWVGYNILGPGLKQLEKMQQD 114

Query: 408 AKNKRAVPDAVGMGAAASLLYAQSAEASTE 497
           A  K+ V   VG+ AAA +   ++A+A+TE
Sbjct: 115 AAKKKGVAAGVGLSAAALMGMPEAADAATE 144

[4][TOP]
>UniRef100_A9U315 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
           patens RepID=A9U315_PHYPA
          Length = 137

 Score = 60.1 bits (144), Expect = 8e-08
 Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
 Frame = +3

Query: 210 VGTVATLSSVAASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQA 389
           V  V T  ++ A+   + +A A+ ++ +LA  DNR   L   L+P +GWV FNI   LQ 
Sbjct: 2   VNLVCTTGAMFAAMATSESAMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNI---LQP 58

Query: 390 QLNQMD-AKNKRAVPDAVGMGAAASLLYAQSAEASTE 497
            LNQ+D  +  +A+    G+GAAA+L+ A  A+A+ E
Sbjct: 59  ALNQVDKMRGAKALVAGAGLGAAATLMAAPHADAAQE 95

[5][TOP]
>UniRef100_A9SPH7 PsbY photosystem II polypeptide n=1 Tax=Physcomitrella patens
           subsp. patens RepID=A9SPH7_PHYPA
          Length = 368

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
 Frame = +3

Query: 207 KVGTVATLSSVAASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNIFGSLQ 386
           K G +  L    AS  +A +A AA E+A+LA SD+R  I+  LL+P +GWV FNI     
Sbjct: 205 KRGVIGALGLGTASLFLAPHADAAQEIATLADSDSRGLIIIGLLLPAVGWVLFNILKPAL 264

Query: 387 AQLNQMDAKNKRAVP-----------DAVGMGAAA-SLLYAQSAEASTE 497
            Q+N +   N    P            A G+ AAA SLL A  A+A  +
Sbjct: 265 NQINNIVEGNDTGAPVKRGKKFGGMIGATGISAAAMSLLAAPKADAQVQ 313

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 42/119 (35%), Positives = 65/119 (54%), Gaps = 1/119 (0%)
 Frame = +3

Query: 147 AARCAPWSSCAQASEEQLGFKVGTVATLSSVAASWMMAGNAQAATELASLACSDNRAGIL 326
           A  CA  S+ +    +Q+   VG  A   ++ A+   + +A A+ ++ +LA  DNR   L
Sbjct: 42  AVPCAKLSTSSDGVAQQIS--VGANALAGAMFAAMATSESALASQQIMALAEGDNRVVAL 99

Query: 327 ATLLVPVLGWVGFNIFGSLQAQLNQMD-AKNKRAVPDAVGMGAAASLLYAQSAEASTEI 500
              LVP +GWV FNI   L+  LNQ+D  K  +++    G+GA A L+ A  A+A+ EI
Sbjct: 100 LIPLVPAIGWVLFNI---LKPALNQVDKMKAAKSLVAGAGLGALA-LVAAPHADAAQEI 154

 Score = 53.1 bits (126), Expect = 1e-05
 Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
 Frame = +3

Query: 240 AASWMMAGNAQAATELASLACSDNRAGILATLLVPVLGWVGFNI-------FGSLQAQLN 398
           A + + A +A AA E+A +A SD R  I+  LL+P +GWV FNI          +Q Q N
Sbjct: 139 ALALVAAPHADAAQEIAQVADSDARGLIIIGLLLPAVGWVLFNILRPALNQIEKMQDQGN 198

Query: 399 QMDAKNKRAVPDAVGMGAAASLLYAQSAEASTEI 500
                 KR V  A+G+G  ASL  A  A+A+ EI
Sbjct: 199 AAAITRKRGVIGALGLG-TASLFLAPHADAAQEI 231

[6][TOP]
>UniRef100_C1MZ88 Photosystem II PsbY protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1MZ88_9CHLO
          Length = 279

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 39/115 (33%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
 Frame = +3

Query: 168 SSCAQASEEQLGFKVGTVATLSSVAASWMMAGNAQAATE-LASLACSDNRAGILATLLVP 344
           S+ A A  +    ++G  A L+   A  +    A AA+E L+ +A  D+RA I   +L P
Sbjct: 46  SASAAAESQTDDLQLGQTAALTLAGALALGTEQASAASESLSQVAGFDSRALIFLGILGP 105

Query: 345 VLGWVGFNIFGSLQAQLNQMDAKN---KRAVPDAVGMGAAASLLYAQSAEASTEI 500
            +GWV +NI      Q N M  KN   K+ +P  +G+ AAA     + A+A+TE+
Sbjct: 106 AIGWVLYNILTPGLNQFNSMQEKNARGKKGIPLGLGLSAAALAGMPEQADAATEL 160

[7][TOP]
>UniRef100_Q1YN63 Putative uncharacterized protein n=1 Tax=Aurantimonas manganoxydans
           SI85-9A1 RepID=Q1YN63_MOBAS
          Length = 172

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 49/151 (32%), Positives = 62/151 (41%), Gaps = 7/151 (4%)
 Frame = -3

Query: 471 RTAERQRRPCRRRRAQRACSWRPSGSAAPAESRRC*SRPSPGPAP---AGSPGYPRGCRC 301
           RT  R    C RRRA  A SWRP G A+    R          AP   +GSP  P     
Sbjct: 2   RTRSRTGARCARRRATAAASWRPCGPASRDRPRWTWCAGPRRAAPSSRSGSPPIPTRPAR 61

Query: 300 RPGTQAQWQPGHC----QPSSTRQRRTTGWQRCRP*SPAAPR*PGHRTTTERTARRTGST 133
            P     W PG C    +P   RQRR  G  R RP +  + R     +      RR  + 
Sbjct: 62  SPMATTSWSPG-CRSPPRPCHRRQRRHPG--RSRPTNGISRRNRDRVSEPNAQRRRAVAI 118

Query: 132 GLALRTLERSAAEVGADMRRAAILTSLGRQR 40
           G+A RT +   A     MRR  +  ++G +R
Sbjct: 119 GVATRTGDAERA-----MRRRCLAAAIGARR 144