[UP]
[1][TOP] >UniRef100_Q6Y683 41 kDa ribosome-associated protein n=1 Tax=Chlamydomonas reinhardtii RepID=Q6Y683_CHLRE Length = 439 Score = 241 bits (615), Expect = 2e-62 Identities = 119/119 (100%), Positives = 119/119 (100%) Frame = +2 Query: 47 MQSSMRARVAGGARRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHK 226 MQSSMRARVAGGARRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHK Sbjct: 1 MQSSMRARVAGGARRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHK 60 Query: 227 VTIMNDGDSDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRGTFDVVYDNNGKDLA 403 VTIMNDGDSDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRGTFDVVYDNNGKDLA Sbjct: 61 VTIMNDGDSDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRGTFDVVYDNNGKDLA 119 [2][TOP] >UniRef100_A8IIK4 Chloroplast stem-loop-binding protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IIK4_CHLRE Length = 439 Score = 241 bits (615), Expect = 2e-62 Identities = 119/119 (100%), Positives = 119/119 (100%) Frame = +2 Query: 47 MQSSMRARVAGGARRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHK 226 MQSSMRARVAGGARRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHK Sbjct: 1 MQSSMRARVAGGARRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHK 60 Query: 227 VTIMNDGDSDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRGTFDVVYDNNGKDLA 403 VTIMNDGDSDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRGTFDVVYDNNGKDLA Sbjct: 61 VTIMNDGDSDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRGTFDVVYDNNGKDLA 119 [3][TOP] >UniRef100_A1YQX4 Chloroplast ribosome-associated protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis RepID=A1YQX4_VOLCA Length = 206 Score = 194 bits (492), Expect = 3e-48 Identities = 91/119 (76%), Positives = 102/119 (85%) Frame = +2 Query: 47 MQSSMRARVAGGARRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHK 226 M + ++A AGGARRA AGRRL+VKVMN+NVLIANTKGGGHAFIGLYLAKELLKKGHK Sbjct: 1 MHAQLKANRAGGARRAFAPAGRRLSVKVMNANVLIANTKGGGHAFIGLYLAKELLKKGHK 60 Query: 227 VTIMNDGDSDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRGTFDVVYDNNGKDLA 403 VTIMNDGD KLTKK P++KYS+L R G + W DP KPSTYPRG+FDVVYDNNGKDL+ Sbjct: 61 VTIMNDGDESKLTKKTPFSKYSELARDGATIAWGDPTKPSTYPRGSFDVVYDNNGKDLS 119 [4][TOP] >UniRef100_Q8GTK8 Os07g0212200 protein n=2 Tax=Oryza sativa RepID=Q8GTK8_ORYSJ Length = 392 Score = 95.5 bits (236), Expect = 2e-18 Identities = 57/122 (46%), Positives = 71/122 (58%), Gaps = 6/122 (4%) Frame = +2 Query: 53 SSMRARVAGGARRAVG--TAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHK 226 ++ R A A R VG T + +VLI NT GGGHA IG YLAK+LL GH Sbjct: 41 AARRCGEAAAAPRRVGAVTVRAQAAAGAGKKSVLIVNTNGGGHAVIGFYLAKDLLAAGHA 100 Query: 227 VTIMNDGD--SDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRG--TFDVVYDNNGK 394 VT++ GD SDK+ KK P++++S+L G VW DPA G +FDVV DNNGK Sbjct: 101 VTVLTVGDEGSDKM-KKPPFSRFSELTSAGATTVWGDPADVGAAVGGGASFDVVLDNNGK 159 Query: 395 DL 400 DL Sbjct: 160 DL 161 [5][TOP] >UniRef100_A5AWW0 Chromosome chr7 scaffold_31, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A5AWW0_VITVI Length = 397 Score = 93.2 bits (230), Expect = 8e-18 Identities = 50/98 (51%), Positives = 62/98 (63%), Gaps = 3/98 (3%) Frame = +2 Query: 116 LTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKY 289 L VK VLI NT GGHA IG Y AK+LL GH+VTIM G+ SDK+ KK P++++ Sbjct: 64 LNVKAQKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTIMTVGEENSDKM-KKPPFSRF 122 Query: 290 SDLERQGLNVVWADPAKPSTYPRG-TFDVVYDNNGKDL 400 S++ G VW DPA+ G FDVV DNNGKD+ Sbjct: 123 SEITSAGGKTVWGDPAEVGKVVAGAAFDVVLDNNGKDI 160 [6][TOP] >UniRef100_C5XDB8 Putative uncharacterized protein Sb02g006430 n=1 Tax=Sorghum bicolor RepID=C5XDB8_SORBI Length = 407 Score = 92.4 bits (228), Expect = 1e-17 Identities = 58/117 (49%), Positives = 68/117 (58%), Gaps = 8/117 (6%) Frame = +2 Query: 74 AGGARRAVGTAGRRLTVKVM-----NSNVLIANTKGGGHAFIGLYLAKELLKKGHKVTIM 238 A ARR A R VKV +VLI NT GGHA IG Y AKELL GH VT++ Sbjct: 49 AVAARRRRRPAPARAGVKVRAEAAKKQSVLIVNTNSGGHAVIGFYFAKELLAAGHAVTVL 108 Query: 239 NDGD--SDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRG-TFDVVYDNNGKDL 400 GD SDK+ KK P++++S+L G VW DPA G +FDVV DNNGKDL Sbjct: 109 TVGDEGSDKM-KKPPFSRFSELTSAGGKTVWGDPADVGAAVGGASFDVVLDNNGKDL 164 [7][TOP] >UniRef100_B9S425 NAD dependent epimerase/dehydratase, putative n=1 Tax=Ricinus communis RepID=B9S425_RICCO Length = 398 Score = 92.4 bits (228), Expect = 1e-17 Identities = 54/106 (50%), Positives = 64/106 (60%), Gaps = 6/106 (5%) Frame = +2 Query: 101 TAGRRLTVKVM---NSNVLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLT 265 +A TVK VLI NT GGHA IG Y AKELL GH+VTI GD SDK+ Sbjct: 63 SASSSFTVKASAAAKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTIFTVGDENSDKM- 121 Query: 266 KKNPYAKYSDLERQGLNVVWADPAKPSTYPRG-TFDVVYDNNGKDL 400 KK P++++S++ G VW DPA+ G TFDVV DNNGKDL Sbjct: 122 KKPPFSRFSEIVSAGGKTVWGDPAEVGKVVEGATFDVVLDNNGKDL 167 [8][TOP] >UniRef100_Q9LYA9 Uncharacterized protein At3g63140, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=Y3314_ARATH Length = 406 Score = 90.9 bits (224), Expect = 4e-17 Identities = 55/127 (43%), Positives = 71/127 (55%), Gaps = 6/127 (4%) Frame = +2 Query: 38 LDIMQSSMRARVAGGARRAVGTAGRRLTVKVMN----SNVLIANTKGGGHAFIGLYLAKE 205 L SS + + R + + ++ TVK + NVLI NT GGHA IG Y AKE Sbjct: 43 LSSSSSSSSSLLTFSLRTSRRLSPQKFTVKASSVGEKKNVLIVNTNSGGHAVIGFYFAKE 102 Query: 206 LLKKGHKVTIMNDGD-SDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRG-TFDVVY 379 LL GH VTI+ GD S + KK P+ ++S++ G VW +PA + G TFDVV Sbjct: 103 LLSAGHAVTILTVGDESSEKMKKPPFNRFSEIVSGGGKTVWGNPANVANVVGGETFDVVL 162 Query: 380 DNNGKDL 400 DNNGKDL Sbjct: 163 DNNGKDL 169 [9][TOP] >UniRef100_C1E7G0 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E7G0_9CHLO Length = 371 Score = 89.0 bits (219), Expect = 2e-16 Identities = 54/118 (45%), Positives = 68/118 (57%), Gaps = 2/118 (1%) Frame = +2 Query: 53 SSMRARVAGGARRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHKVT 232 S ARVA RRA+ ++ V VLI NT GGGHA IG +LAK L +GH VT Sbjct: 27 SGRNARVA---RRAIPAV---ISAAVAPQKVLIVNTNGGGHANIGFWLAKTLAAQGHSVT 80 Query: 233 IMNDGD-SDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRGT-FDVVYDNNGKDL 400 + G DK +K P+ +++L G+ VWADP + +T G FDVV DNNGKDL Sbjct: 81 LNTIGSKDDKKMQKPPFTYFNELTSAGVQTVWADPGELATKAAGAQFDVVVDNNGKDL 138 [10][TOP] >UniRef100_C6TMG5 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6TMG5_SOYBN Length = 208 Score = 87.0 bits (214), Expect = 6e-16 Identities = 48/89 (53%), Positives = 58/89 (65%), Gaps = 3/89 (3%) Frame = +2 Query: 143 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKYSDLERQGLN 316 VLI NT GGHA IG Y AKELL GH VTI+ GD SDK+ KK P+ ++S++ G Sbjct: 80 VLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGDEGSDKM-KKPPFNRFSEIVSAGGR 138 Query: 317 VVWADPAKPSTYPRG-TFDVVYDNNGKDL 400 VW +PA+ + G FDVV DNNGKDL Sbjct: 139 TVWGNPAQVGSVVGGEVFDVVLDNNGKDL 167 [11][TOP] >UniRef100_B9GSN8 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GSN8_POPTR Length = 404 Score = 87.0 bits (214), Expect = 6e-16 Identities = 47/89 (52%), Positives = 59/89 (66%), Gaps = 3/89 (3%) Frame = +2 Query: 143 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKYSDLERQGLN 316 VLI NT GGHA IG Y AKELL GH+VTI+ G+ SDK+ KK P++++S++ G Sbjct: 80 VLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEESSDKM-KKPPFSRFSEIVSAGGK 138 Query: 317 VVWADPAKPSTYPRG-TFDVVYDNNGKDL 400 VW +PA+ G FDVV DNNGKDL Sbjct: 139 TVWGNPAEVGKVVEGAAFDVVLDNNGKDL 167 [12][TOP] >UniRef100_B9H883 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H883_POPTR Length = 377 Score = 86.3 bits (212), Expect = 1e-15 Identities = 46/89 (51%), Positives = 60/89 (67%), Gaps = 3/89 (3%) Frame = +2 Query: 143 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKYSDLERQGLN 316 +LI NT GGHA IG Y AKELL GH+V+I+ G+ SDK+ KK P++++S++ G Sbjct: 53 ILIVNTNSGGHAVIGFYFAKELLGSGHEVSILTVGEESSDKM-KKPPFSRFSEIVGAGGK 111 Query: 317 VVWADPAKPSTYPRG-TFDVVYDNNGKDL 400 VW +PA+ G TFDVV DNNGKDL Sbjct: 112 TVWGNPAEVGKAVEGATFDVVLDNNGKDL 140 [13][TOP] >UniRef100_O24365 Chloroplast mRNA-binding protein CSP41 (Fragment) n=1 Tax=Spinacia oleracea RepID=O24365_SPIOL Length = 415 Score = 85.9 bits (211), Expect = 1e-15 Identities = 47/89 (52%), Positives = 56/89 (62%), Gaps = 3/89 (3%) Frame = +2 Query: 143 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKYSDLERQGLN 316 VLI NT GGHA IG Y AKELL GH+VT+ GD SDK+ KK P+ ++S++ G Sbjct: 92 VLIVNTNSGGHAVIGFYFAKELLGSGHQVTVFTVGDEGSDKM-KKPPFTRFSEITSAGGK 150 Query: 317 VVWADPAKPSTYPRG-TFDVVYDNNGKDL 400 VW +PA G FDVV DNNGKDL Sbjct: 151 TVWGNPADIGNVVGGEAFDVVLDNNGKDL 179 [14][TOP] >UniRef100_Q7X998 MRNA-binding protein (Fragment) n=1 Tax=Nicotiana tabacum RepID=Q7X998_TOBAC Length = 405 Score = 84.7 bits (208), Expect = 3e-15 Identities = 46/89 (51%), Positives = 55/89 (61%), Gaps = 3/89 (3%) Frame = +2 Query: 143 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKYSDLERQGLN 316 VLI NT GGHA IG Y AKELL GH VTI+ G+ SDK+ KK P+ ++S++ G Sbjct: 81 VLIVNTNSGGHAVIGFYFAKELLGSGHDVTILTVGEESSDKM-KKTPFNRFSEITGAGGR 139 Query: 317 VVWADPAKPSTYPRG-TFDVVYDNNGKDL 400 +W DPA G FD V DNNGKDL Sbjct: 140 TIWGDPADVGKILEGEVFDAVLDNNGKDL 168 [15][TOP] >UniRef100_Q9XEJ6 MRNA binding protein n=1 Tax=Solanum lycopersicum RepID=Q9XEJ6_SOLLC Length = 407 Score = 84.3 bits (207), Expect = 4e-15 Identities = 46/94 (48%), Positives = 56/94 (59%), Gaps = 3/94 (3%) Frame = +2 Query: 128 VMNSNVLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKYSDLE 301 V VLI NT GGHA IG Y AKELL GH VT++ G+ SDK+ KK P+ ++S++ Sbjct: 78 VEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHDVTVLTVGEESSDKM-KKTPFTRFSEIT 136 Query: 302 RQGLNVVWADPAKPSTYPRG-TFDVVYDNNGKDL 400 G VW +PA G FD V DNNGKDL Sbjct: 137 GAGGRTVWGNPADVGKILEGEVFDAVLDNNGKDL 170 [16][TOP] >UniRef100_Q00VC0 PREDICTED OJ1664_D08.105 gene product (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00VC0_OSTTA Length = 358 Score = 83.2 bits (204), Expect = 8e-15 Identities = 50/124 (40%), Positives = 66/124 (53%), Gaps = 2/124 (1%) Frame = +2 Query: 35 VLDIMQSSMRARVAGGARRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLK 214 V D+++ R RA G + K VLI NT GGGHA IG +LAK L Sbjct: 4 VSDVLRVRSTTRTPSRNARAHGVVDVSASGK---KKVLIVNTNGGGHANIGFWLAKTLAG 60 Query: 215 KGHKVTIMNDG-DSDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRGT-FDVVYDNN 388 GH+VT+ G + DK K P++ + ++ G+ WADPA +T G FDVV DNN Sbjct: 61 AGHEVTMNVVGAEDDKKMAKTPFSLFDEIRSMGVTTTWADPADVATKHAGAKFDVVVDNN 120 Query: 389 GKDL 400 GKD+ Sbjct: 121 GKDM 124 [17][TOP] >UniRef100_C6TM93 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6TM93_SOYBN Length = 403 Score = 82.8 bits (203), Expect = 1e-14 Identities = 46/89 (51%), Positives = 57/89 (64%), Gaps = 3/89 (3%) Frame = +2 Query: 143 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKYSDLERQGLN 316 VLI NT GGHA IG Y AKELL GH VTI+ G+ SDK+ KK P+ ++S++ G Sbjct: 79 VLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKM-KKPPFNRFSEIVSAGGR 137 Query: 317 VVWADPAKPSTYPRG-TFDVVYDNNGKDL 400 VW +PA+ + G FDVV DNNGK L Sbjct: 138 TVWGNPAEVGSVVGGEVFDVVLDNNGKGL 166 [18][TOP] >UniRef100_B8LL40 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LL40_PICSI Length = 423 Score = 82.8 bits (203), Expect = 1e-14 Identities = 46/106 (43%), Positives = 63/106 (59%), Gaps = 9/106 (8%) Frame = +2 Query: 110 RRLTVKVM------NSNVLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLT 265 R LTVK M + VL+ NT GGHA IG + AK+L+ GH+VT+ G+ S+K+T Sbjct: 77 RSLTVKAMAAIGEKSKKVLVVNTNSGGHAMIGFWFAKDLISAGHQVTVFTVGEEASEKMT 136 Query: 266 KKNPYAKYSDLERQGLNVVWADPAKPSTYPRGT-FDVVYDNNGKDL 400 K P++++S+L G+ W PA+ T FD V DNNGKDL Sbjct: 137 KP-PFSRFSELRAIGVQTTWGKPAEIGKIFESTMFDAVLDNNGKDL 181 [19][TOP] >UniRef100_C1N8M5 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N8M5_9CHLO Length = 362 Score = 81.6 bits (200), Expect = 2e-14 Identities = 48/107 (44%), Positives = 62/107 (57%), Gaps = 2/107 (1%) Frame = +2 Query: 86 RRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGDS-DKL 262 RRA G RR + VLI NT GGGHA IG +LAK L GH VT+ G + DK Sbjct: 20 RRANGRTARR-------AKVLIVNTNGGGHANIGFWLAKTLAAHGHAVTLCVVGTADDKK 72 Query: 263 TKKNPYAKYSDLERQGLNVVWADPAKPSTYP-RGTFDVVYDNNGKDL 400 +K P+ + +L G+ +WA+P +T P + FDVV DNNGKD+ Sbjct: 73 MQKPPFTYFGELTSAGVKTMWANPNDLATLPGQPEFDVVVDNNGKDM 119 [20][TOP] >UniRef100_A9S841 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S841_PHYPA Length = 412 Score = 80.1 bits (196), Expect = 7e-14 Identities = 45/115 (39%), Positives = 66/115 (57%), Gaps = 6/115 (5%) Frame = +2 Query: 74 AGGARRAVGTAGRRLTVKVM---NSNVLIANTKGGGHAFIGLYLAKELLKKGHKVTIMND 244 + G + G L V+ + VLI NT GGHA IG + AK+L+ GH VTI+ Sbjct: 60 SNGVSTSKSNRGAALVVRAAAGESKKVLIVNTNSGGHAVIGFWTAKDLVDAGHSVTILTV 119 Query: 245 GD--SDKLTKKNPYAKYSDLERQGLNVVWADPAK-PSTYPRGTFDVVYDNNGKDL 400 G+ SDK+ KK P++++++L G+ VW +P+ + +FDVV DNNGK L Sbjct: 120 GEELSDKM-KKQPFSRFNELREIGVETVWGEPSDLGAAVGSASFDVVLDNNGKTL 173 [21][TOP] >UniRef100_A4S772 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S772_OSTLU Length = 333 Score = 77.8 bits (190), Expect = 4e-13 Identities = 41/89 (46%), Positives = 56/89 (62%), Gaps = 2/89 (2%) Frame = +2 Query: 140 NVLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDG-DSDKLTKKNPYAKYSDLERQGLN 316 +VLI NT GGGHA IG +LAK L GH VT+ G + DK K P++ + ++ G+ Sbjct: 11 SVLIVNTNGGGHANIGFWLAKTLAGAGHDVTMNVVGAEDDKKMAKTPFSLFDEIRGMGVK 70 Query: 317 VVWADPAKPSTYPRGT-FDVVYDNNGKDL 400 VWA+P + ++ G FDVV DNNGKD+ Sbjct: 71 TVWANPDEVASKHAGAKFDVVVDNNGKDM 99 [22][TOP] >UniRef100_Q7X9A4 MRNA binding protein (Fragment) n=1 Tax=Bigelowiella natans RepID=Q7X9A4_BIGNA Length = 325 Score = 59.7 bits (143), Expect = 1e-07 Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 3/82 (3%) Frame = +2 Query: 161 KGGGHAFIGLYLAKELLKKGHKVTIMNDGDSDKLTKKNPYAKYSDLERQGLNVVWADPAK 340 KG GH IG +LA +L GH VT++ D + K K P+++Y DL +G+ + + D Sbjct: 11 KGRGHGEIGYHLASQLATDGHAVTLLGDPATKK--DKLPFSRYGDLMGKGVTIKYGDACS 68 Query: 341 PSTYPR-GTFDVVYDN--NGKD 397 P T G FD V+DN GKD Sbjct: 69 PGTLQELGEFDAVFDNISKGKD 90