BP090310 ( MX221h06_r )

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[1][TOP]
>UniRef100_A8JGP8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas
           reinhardtii RepID=A8JGP8_CHLRE
          Length = 188

 Score =  100 bits (248), Expect = 7e-20
 Identities = 54/78 (69%), Positives = 58/78 (74%)
 Frame = +2

Query: 29  AVARPARSSVRPMAALKPAVMAAPVAAPAQANQMMCLDPGQQQDVLRPSPTCPP*ATSRS 208
           AVARPARSSVRPMAALKPAV AAPVAAPAQANQMM   P   + +       PP +  + 
Sbjct: 13  AVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNK-MFETFSYLPPLSDEQI 71

Query: 209 PAQVDYIVANGWIPCLEF 262
            AQVDYIVANGWIPCLEF
Sbjct: 72  AAQVDYIVANGWIPCLEF 89

[2][TOP]
>UniRef100_P08475 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1
           Tax=Chlamydomonas reinhardtii RepID=RBS2_CHLRE
          Length = 185

 Score =  100 bits (248), Expect = 7e-20
 Identities = 54/78 (69%), Positives = 58/78 (74%)
 Frame = +2

Query: 29  AVARPARSSVRPMAALKPAVMAAPVAAPAQANQMMCLDPGQQQDVLRPSPTCPP*ATSRS 208
           AVARPARSSVRPMAALKPAV AAPVAAPAQANQMM   P   + +       PP +  + 
Sbjct: 13  AVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNK-MFETFSYLPPLSDEQI 71

Query: 209 PAQVDYIVANGWIPCLEF 262
            AQVDYIVANGWIPCLEF
Sbjct: 72  AAQVDYIVANGWIPCLEF 89

[3][TOP]
>UniRef100_P00873 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=2
           Tax=Chlamydomonas reinhardtii RepID=RBS1_CHLRE
          Length = 185

 Score = 99.8 bits (247), Expect = 9e-20
 Identities = 54/78 (69%), Positives = 57/78 (73%)
 Frame = +2

Query: 29  AVARPARSSVRPMAALKPAVMAAPVAAPAQANQMMCLDPGQQQDVLRPSPTCPP*ATSRS 208
           AVARPARSSVRPMAALKPAV AAPVAAPAQANQMM   P   + +       PP    + 
Sbjct: 13  AVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNK-MFETFSYLPPLTDEQI 71

Query: 209 PAQVDYIVANGWIPCLEF 262
            AQVDYIVANGWIPCLEF
Sbjct: 72  AAQVDYIVANGWIPCLEF 89

[4][TOP]
>UniRef100_Q84U90 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox
           carteri RepID=Q84U90_VOLCA
          Length = 185

 Score = 93.6 bits (231), Expect = 6e-18
 Identities = 50/77 (64%), Positives = 55/77 (71%)
 Frame = +2

Query: 32  VARPARSSVRPMAALKPAVMAAPVAAPAQANQMMCLDPGQQQDVLRPSPTCPP*ATSRSP 211
           VARPARSSVRP+A LKPAV AAPVAAPAQAN+MM   P   + +       PP    +  
Sbjct: 14  VARPARSSVRPVAGLKPAVKAAPVAAPAQANKMMVWTPVNNK-MFETFSYLPPLTDEQIA 72

Query: 212 AQVDYIVANGWIPCLEF 262
           AQVDYIVANGWIPCLEF
Sbjct: 73  AQVDYIVANGWIPCLEF 89

[5][TOP]
>UniRef100_Q84U92 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox
           carteri RepID=Q84U92_VOLCA
          Length = 185

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 48/78 (61%), Positives = 55/78 (70%)
 Frame = +2

Query: 29  AVARPARSSVRPMAALKPAVMAAPVAAPAQANQMMCLDPGQQQDVLRPSPTCPP*ATSRS 208
           AV RPARSSVRP+A LKPA+ AAPVA+PAQAN+MM   P   + +       PP    + 
Sbjct: 13  AVVRPARSSVRPVAVLKPAIKAAPVASPAQANKMMVWTPVNNK-MFETFSYLPPLTDEQI 71

Query: 209 PAQVDYIVANGWIPCLEF 262
            AQVDYIVANGWIPCLEF
Sbjct: 72  AAQVDYIVANGWIPCLEF 89

[6][TOP]
>UniRef100_Q84U91 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox
           carteri RepID=Q84U91_VOLCA
          Length = 185

 Score = 88.2 bits (217), Expect = 3e-16
 Identities = 46/78 (58%), Positives = 53/78 (67%)
 Frame = +2

Query: 29  AVARPARSSVRPMAALKPAVMAAPVAAPAQANQMMCLDPGQQQDVLRPSPTCPP*ATSRS 208
           AVARPARS VRP+A LKP+V A PVA P QAN+MM   P   + +       PP +  + 
Sbjct: 13  AVARPARSGVRPVAVLKPSVRATPVATPTQANKMMVWTPVNNK-MFETFSYLPPLSDEQI 71

Query: 209 PAQVDYIVANGWIPCLEF 262
            AQVDYIVANGWIPCLEF
Sbjct: 72  AAQVDYIVANGWIPCLEF 89

[7][TOP]
>UniRef100_Q5VBK1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Dunaliella
           tertiolecta RepID=Q5VBK1_DUNTE
          Length = 189

 Score = 63.9 bits (154), Expect = 5e-09
 Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
 Frame = +2

Query: 32  VARPARSSVRPMAALKPAVMAAPVAAPA-QANQMMCLDPGQQQDVLRPSPTCPP*ATSRS 208
           +A+ +R++ +  A+LKPAV AAP A PA +ANQMM  +P   +         PP    + 
Sbjct: 14  MAKASRTATKVQASLKPAVRAAPKAQPAVRANQMMVWNPINNKQ-FETFSYLPPLTADQI 72

Query: 209 PAQVDYIVANGWIPCLEF 262
             QVDYIV NGW PCLEF
Sbjct: 73  AKQVDYIVNNGWTPCLEF 90

[8][TOP]
>UniRef100_Q5VBK0 Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit n=1
           Tax=Dunaliella tertiolecta RepID=Q5VBK0_DUNTE
          Length = 188

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 36/75 (48%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
 Frame = +2

Query: 44  ARSSVRPMAALKPAVMAAPVA-APA-QANQMMCLDPGQQQDVLRPSPTCPP*ATSRSPAQ 217
           +R+S +  A+LKPAV A P A APA +ANQMM   P   +         PP    +   Q
Sbjct: 16  SRTSTKVQASLKPAVRAVPKAQAPAVRANQMMVWQPINNKQ-FETFSYLPPLTADQIARQ 74

Query: 218 VDYIVANGWIPCLEF 262
           VDYIV NGW PCLEF
Sbjct: 75  VDYIVENGWTPCLEF 89

[9][TOP]
>UniRef100_C4P6Y2 Ribulose bisphosphate carboxylase small chain n=1
           Tax=Ankistrodesmus convolutus RepID=C4P6Y2_9CHLO
          Length = 165

 Score = 37.4 bits (85), Expect(3) = 7e-07
 Identities = 16/26 (61%), Positives = 17/26 (65%)
 Frame = +2

Query: 185 PP*ATSRSPAQVDYIVANGWIPCLEF 262
           PP    +   QVDYIV NGW PCLEF
Sbjct: 42  PPLNDEQIARQVDYIVNNGWTPCLEF 67

 Score = 33.1 bits (74), Expect(3) = 7e-07
 Identities = 14/15 (93%), Positives = 15/15 (100%)
 Frame = +1

Query: 166 ETFSYLPPLSDEQIA 210
           ETFSYLPPL+DEQIA
Sbjct: 36  ETFSYLPPLNDEQIA 50

 Score = 25.4 bits (54), Expect(3) = 7e-07
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +3

Query: 117 RPTR*CVWTPVNNKMF 164
           +P +  VW PVNNK F
Sbjct: 20  KPAKFMVWQPVNNKFF 35

[10][TOP]
>UniRef100_Q5XR40 Ribulose bisphosphate carboxylase small chain n=1 Tax=Dunaliella
           salina RepID=Q5XR40_DUNSA
          Length = 190

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 42/88 (47%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
 Frame = +2

Query: 11  CPPSPLAVARP-ARSSVRPMAALKPAVMA-APVA-APA-QANQMMCLDPGQQQDVLRPSP 178
           CP    AVA P +R S +  A+LKPAV   AP A APA + NQMM   P   +       
Sbjct: 9   CP----AVATPISRGSTKVQASLKPAVTRPAPKAQAPAVRTNQMMVWRPVNNKQ-FETFS 63

Query: 179 TCPP*ATSRSPAQVDYIVANGWIPCLEF 262
             PP    +   QVDYIV NGWIPCLEF
Sbjct: 64  YLPPLTADQIARQVDYIVGNGWIPCLEF 91

[11][TOP]
>UniRef100_Q68BL0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris
           bacillaris RepID=Q68BL0_NANBA
          Length = 182

 Score = 40.0 bits (92), Expect(3) = 4e-06
 Identities = 17/26 (65%), Positives = 18/26 (69%)
 Frame = +2

Query: 185 PP*ATSRSPAQVDYIVANGWIPCLEF 262
           PP + S    QVDYIV NGW PCLEF
Sbjct: 61  PPLSDSEITKQVDYIVRNGWTPCLEF 86

 Score = 28.1 bits (61), Expect(3) = 4e-06
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +1

Query: 166 ETFSYLPPLSDEQI 207
           ETFS+LPPLSD +I
Sbjct: 55  ETFSFLPPLSDSEI 68

 Score = 25.0 bits (53), Expect(3) = 4e-06
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 135 VWTPVNNKMF 164
           VWTP+NNK F
Sbjct: 45  VWTPINNKFF 54

[12][TOP]
>UniRef100_Q68BK9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris
           bacillaris RepID=Q68BK9_NANBA
          Length = 182

 Score = 40.0 bits (92), Expect(3) = 4e-06
 Identities = 17/26 (65%), Positives = 18/26 (69%)
 Frame = +2

Query: 185 PP*ATSRSPAQVDYIVANGWIPCLEF 262
           PP + S    QVDYIV NGW PCLEF
Sbjct: 61  PPLSDSEITKQVDYIVRNGWTPCLEF 86

 Score = 28.1 bits (61), Expect(3) = 4e-06
 Identities = 11/14 (78%), Positives = 13/14 (92%)
 Frame = +1

Query: 166 ETFSYLPPLSDEQI 207
           ETFS+LPPLSD +I
Sbjct: 55  ETFSFLPPLSDSEI 68

 Score = 25.0 bits (53), Expect(3) = 4e-06
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +3

Query: 135 VWTPVNNKMF 164
           VWTP+NNK F
Sbjct: 45  VWTPINNKFF 54

[13][TOP]
>UniRef100_Q30CC3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Haematococcus
           pluvialis RepID=Q30CC3_HAEPL
          Length = 141

 Score = 41.2 bits (95), Expect(3) = 7e-06
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +2

Query: 185 PP*ATSRSPAQVDYIVANGWIPCLEF 262
           PP  + +   QVDY+V NGWIPCLEF
Sbjct: 19  PPLTSDQIARQVDYVVGNGWIPCLEF 44

 Score = 29.6 bits (65), Expect(3) = 7e-06
 Identities = 12/15 (80%), Positives = 14/15 (93%)
 Frame = +1

Query: 166 ETFSYLPPLSDEQIA 210
           ETFSYLPPL+ +QIA
Sbjct: 13  ETFSYLPPLTSDQIA 27

 Score = 21.6 bits (44), Expect(3) = 7e-06
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +3

Query: 135 VWTPVNNKMF 164
           VW P+NNK +
Sbjct: 3   VWQPINNKQY 12

[14][TOP]
>UniRef100_Q38693 Ribulose bisphosphate carboxylase small chain 7, chloroplastic n=1
           Tax=Acetabularia peniculus RepID=RBS7_ACECL
          Length = 183

 Score = 37.0 bits (84), Expect(3) = 8e-06
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +2

Query: 185 PP*ATSRSPAQVDYIVANGWIPCLEF 262
           PP    +   QVDYI+AN W PCLEF
Sbjct: 62  PPLTDEQISKQVDYILANSWTPCLEF 87

 Score = 32.0 bits (71), Expect(3) = 8e-06
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +1

Query: 166 ETFSYLPPLSDEQIA 210
           ETFSYLPPL+DEQI+
Sbjct: 56  ETFSYLPPLTDEQIS 70

 Score = 23.1 bits (48), Expect(3) = 8e-06
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 135 VWTPVNNKMF 164
           VW P NNKMF
Sbjct: 46  VWQPFNNKMF 55

[15][TOP]
>UniRef100_P16131 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1
           Tax=Acetabularia peniculus RepID=RBS3_ACECL
          Length = 183

 Score = 37.0 bits (84), Expect(3) = 8e-06
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +2

Query: 185 PP*ATSRSPAQVDYIVANGWIPCLEF 262
           PP    +   QVDYI+AN W PCLEF
Sbjct: 62  PPLTDEQISKQVDYILANSWTPCLEF 87

 Score = 32.0 bits (71), Expect(3) = 8e-06
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +1

Query: 166 ETFSYLPPLSDEQIA 210
           ETFSYLPPL+DEQI+
Sbjct: 56  ETFSYLPPLTDEQIS 70

 Score = 23.1 bits (48), Expect(3) = 8e-06
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 135 VWTPVNNKMF 164
           VW P NNKMF
Sbjct: 46  VWQPFNNKMF 55

[16][TOP]
>UniRef100_Q38692 Ribulose bisphosphate carboxylase small chain 6, chloroplastic n=1
           Tax=Acetabularia peniculus RepID=RBS6_ACECL
          Length = 182

 Score = 37.0 bits (84), Expect(3) = 8e-06
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +2

Query: 185 PP*ATSRSPAQVDYIVANGWIPCLEF 262
           PP    +   QVDYI+AN W PCLEF
Sbjct: 61  PPLTDEQISKQVDYILANAWTPCLEF 86

 Score = 32.0 bits (71), Expect(3) = 8e-06
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +1

Query: 166 ETFSYLPPLSDEQIA 210
           ETFSYLPPL+DEQI+
Sbjct: 55  ETFSYLPPLTDEQIS 69

 Score = 23.1 bits (48), Expect(3) = 8e-06
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 135 VWTPVNNKMF 164
           VW P NNKMF
Sbjct: 45  VWQPFNNKMF 54

[17][TOP]
>UniRef100_P16132 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1
           Tax=Acetabularia peniculus RepID=RBS4_ACECL
          Length = 182

 Score = 37.0 bits (84), Expect(3) = 8e-06
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = +2

Query: 185 PP*ATSRSPAQVDYIVANGWIPCLEF 262
           PP    +   QVDYI+AN W PCLEF
Sbjct: 61  PPLTDEQISKQVDYILANSWTPCLEF 86

 Score = 32.0 bits (71), Expect(3) = 8e-06
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = +1

Query: 166 ETFSYLPPLSDEQIA 210
           ETFSYLPPL+DEQI+
Sbjct: 55  ETFSYLPPLTDEQIS 69

 Score = 23.1 bits (48), Expect(3) = 8e-06
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 135 VWTPVNNKMF 164
           VW P NNKMF
Sbjct: 45  VWQPFNNKMF 54