BP089622 ( MX210h01_r )

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[1][TOP]
>UniRef100_Q9SPI9 Photosystem II reaction center W protein, chloroplastic n=2
           Tax=Chlamydomonas reinhardtii RepID=PSBW_CHLRE
          Length = 115

 Score =  231 bits (589), Expect = 2e-59
 Identities = 115/115 (100%), Positives = 115/115 (100%)
 Frame = +3

Query: 45  MQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFAL 224
           MQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFAL
Sbjct: 1   MQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFAL 60

Query: 225 VDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 389
           VDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL
Sbjct: 61  VDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 115

[2][TOP]
>UniRef100_C1FIQ5 Photosystem II 13kD protein, chloroplast n=1 Tax=Micromonas sp.
           RCC299 RepID=C1FIQ5_9CHLO
          Length = 118

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 51/110 (46%), Positives = 67/110 (60%), Gaps = 5/110 (4%)
 Frame = +3

Query: 75  VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAH--PAFALVDERMNGD 248
           VAAKP +R  AR A   V KAT  ++ V KK A+LS     L A   PA A+VDER+NGD
Sbjct: 12  VAAKPAARKVARKAT--VAKATVAKASVPKK-AVLSAAVTGLVAQTLPALAVVDERLNGD 68

Query: 249 GTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLG---DFEDADDGLKL 389
           GTG   G+ND +LG++LL +   +++ +F  QKD G     E+ D GL L
Sbjct: 69  GTGLILGINDEILGFILLTIPALVFSQFFYAQKDDGIAAGGENDDSGLSL 118

[3][TOP]
>UniRef100_Q41387 Photosystem II reaction center W protein, chloroplastic n=1
           Tax=Spinacia oleracea RepID=PSBW_SPIOL
          Length = 137

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 36/84 (42%), Positives = 55/84 (65%)
 Frame = +3

Query: 138 TTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGT 317
           TT  +  +   ++L+   A   ++PA ALVDERM+ +GTG PFG+++ +LGW+L GVFG 
Sbjct: 56  TTTTTNKSMGASLLAAAAAATISNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGL 115

Query: 318 MWAIWFIGQKDLGDFEDADDGLKL 389
           +WA++F+    L   ED + GL L
Sbjct: 116 IWALYFVYASGLE--EDEESGLSL 137

[4][TOP]
>UniRef100_C6SYI0 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6SYI0_SOYBN
          Length = 132

 Score = 74.7 bits (182), Expect = 3e-12
 Identities = 44/120 (36%), Positives = 67/120 (55%), Gaps = 11/120 (9%)
 Frame = +3

Query: 63  RAPRVAAKPVSRSGARS-AVTVVCKATTVRSEVAKK----------VAMLSTLPATLAAH 209
           RA  V  +PV  S +    +  + KA  VR  + +K           ++L+   A   + 
Sbjct: 15  RAGLVLKRPVGASSSTVLGLPAMAKAGKVRCSMEEKPSSSSNIGMGASLLAAAVAATMSS 74

Query: 210 PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 389
           PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F+    L   ED + GL L
Sbjct: 75  PAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYASTLE--EDEESGLSL 132

[5][TOP]
>UniRef100_B7FHC2 Putative uncharacterized protein n=1 Tax=Medicago truncatula
           RepID=B7FHC2_MEDTR
          Length = 136

 Score = 73.9 bits (180), Expect = 5e-12
 Identities = 39/77 (50%), Positives = 53/77 (68%)
 Frame = +3

Query: 159 AKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 338
           A  +A +S   ATL++  A ALVDERM+ +GTG PFG+++ +LGW+L GVFG +WA++FI
Sbjct: 64  ASLIAAISA--ATLSSPAAMALVDERMSTEGTGLPFGLSNNLLGWLLFGVFGLIWALYFI 121

Query: 339 GQKDLGDFEDADDGLKL 389
               L   ED D GL L
Sbjct: 122 YASSLD--EDEDSGLSL 136

[6][TOP]
>UniRef100_C6T2W3 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6T2W3_SOYBN
          Length = 133

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 12/121 (9%)
 Frame = +3

Query: 63  RAPRVAAKPVSRSGARS-AVTVVCKATTVRSEVAKKVAMLSTL-----------PATLAA 206
           R   V  +PV  S +    +  + KA  VR  + +K +  S L            AT+++
Sbjct: 15  RTGHVLKRPVGASSSTVLGLPAMAKAGRVRCSMEEKPSSSSNLGMGASLLAAAAAATMSS 74

Query: 207 HPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLK 386
             A ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F+    L   ED + GL 
Sbjct: 75  PAAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALFFVYTSTLE--EDEESGLS 132

Query: 387 L 389
           L
Sbjct: 133 L 133

[7][TOP]
>UniRef100_C6SWM3 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6SWM3_SOYBN
          Length = 136

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 41/121 (33%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
 Frame = +3

Query: 39  IKMQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAH--- 209
           ++ ++L   +P +    + + G R + ++  K ++V+   +  + M ++L A  +A    
Sbjct: 19  VQKRSLGFSSPVLGLPAMGKVG-RVSCSMEEKPSSVKESSSSMLGMGASLMAAASAAAMS 77

Query: 210 -PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLK 386
            PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F+    L   ED + GL 
Sbjct: 78  GPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYTSSLE--EDEESGLS 135

Query: 387 L 389
           L
Sbjct: 136 L 136

[8][TOP]
>UniRef100_C5XLL1 Putative uncharacterized protein Sb03g036090 n=1 Tax=Sorghum
           bicolor RepID=C5XLL1_SORBI
          Length = 126

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 13/128 (10%)
 Frame = +3

Query: 45  MQALSARAPR--VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA-------- 194
           M  +SA A    VA   ++R  A     +  ++  VR   AK  A +S   A        
Sbjct: 1   MATVSAAAATTVVARAAIARPNALGLPQLRARSERVRCSYAKDAAAVSAKAAGASLLAAA 60

Query: 195 ---TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 365
              T +A PA ALVDERM+ +GTG   G+++ +LGW+LLGVFG +W+++ +   DL   E
Sbjct: 61  GAVTASAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYTSDLD--E 118

Query: 366 DADDGLKL 389
           D + GL L
Sbjct: 119 DEESGLSL 126

[9][TOP]
>UniRef100_A7PUM2 Chromosome chr7 scaffold_31, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7PUM2_VITVI
          Length = 135

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 44/124 (35%), Positives = 65/124 (52%), Gaps = 17/124 (13%)
 Frame = +3

Query: 69  PRVAAKP----VSRSGARSAVTVVCKATTVRSEVAKK-------------VAMLSTLPAT 197
           PRV  +P    V  S A   + V+ K   V   + +K              ++++   A 
Sbjct: 14  PRVGLRPNGGTVGTSSAILGLPVMAKKGRVTCSMKEKPSVEDGSLKMGMGASLMAAACAA 73

Query: 198 LAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADD 377
             + PA ALVDERM+ +GTG PFG+++  LGW+L GVFG +WA++F+    L   ED + 
Sbjct: 74  TMSSPAMALVDERMSTEGTGLPFGLSNNTLGWILFGVFGLIWALYFVYTATLE--EDEES 131

Query: 378 GLKL 389
           GL L
Sbjct: 132 GLSL 135

[10][TOP]
>UniRef100_B4FUI4 Photosystem II reaction center W protein n=1 Tax=Zea mays
           RepID=B4FUI4_MAIZE
          Length = 127

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
 Frame = +3

Query: 75  VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA-----------TLAAHPAFA 221
           VA   ++R  A     +  ++  VR   AK  A +ST  A           T +A PA A
Sbjct: 13  VARAAIARPNALGLPALRARSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTASAGPALA 72

Query: 222 LVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 389
           LVDERM+ +GTG   G+++ +LGW+LLGVFG +W+++ I   DL D ++   GL L
Sbjct: 73  LVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDL-DEDEESGGLSL 127

[11][TOP]
>UniRef100_B9S4T1 Photosystem II reaction center W protein, chloroplast, putative n=1
           Tax=Ricinus communis RepID=B9S4T1_RICCO
          Length = 132

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 33/81 (40%), Positives = 52/81 (64%)
 Frame = +3

Query: 147 RSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWA 326
           RS      ++++++     + PA ALVDER++ +GTG PFG+++ +LGW+LLGVFG +W+
Sbjct: 54  RSNKGMSASLIASICGVTMSSPALALVDERLSTEGTGLPFGLSNNLLGWILLGVFGLIWS 113

Query: 327 IWFIGQKDLGDFEDADDGLKL 389
            + +    L D  D D GL L
Sbjct: 114 FYTVYTSTLDD--DEDSGLSL 132

[12][TOP]
>UniRef100_B6TM37 Photosystem II reaction center W protein n=1 Tax=Zea mays
           RepID=B6TM37_MAIZE
          Length = 127

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 11/116 (9%)
 Frame = +3

Query: 75  VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA-----------TLAAHPAFA 221
           VA   ++R  A     +   +  VR   AK  A +ST  A           T +A PA A
Sbjct: 13  VARAAIARPNALGLPALRASSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTASAGPALA 72

Query: 222 LVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 389
           LVDERM+ +GTG   G+++ +LGW+LLGVFG +W+++ I   DL D ++   GL L
Sbjct: 73  LVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDL-DEDEESGGLSL 127

[13][TOP]
>UniRef100_A7QVP6 Chromosome chr14 scaffold_190, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7QVP6_VITVI
          Length = 135

 Score = 71.2 bits (173), Expect = 3e-11
 Identities = 46/132 (34%), Positives = 75/132 (56%), Gaps = 5/132 (3%)
 Frame = +3

Query: 9   TSLRRANSTNIKMQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTL 188
           TSL RA+  +  +  +S+  P +    +++ G    V  + +     S++   ++M ++L
Sbjct: 11  TSLVRASVASKGLNGISS--PVLGLPAMAKKGR---VRCMSEEKPCGSDMGSSISMGASL 65

Query: 189 PATLAA-----HPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDL 353
            A  AA      PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F     L
Sbjct: 66  MAAAAAVAASAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFTYTATL 125

Query: 354 GDFEDADDGLKL 389
              ED + GL L
Sbjct: 126 E--EDDESGLSL 135

[14][TOP]
>UniRef100_A9SEQ6 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
           patens RepID=A9SEQ6_PHYPA
          Length = 142

 Score = 70.9 bits (172), Expect = 4e-11
 Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 6/112 (5%)
 Frame = +3

Query: 72  RVAAKPVSRSGARSAVTVVCKATTVRSEVAK-----KVAMLSTLPATLA-AHPAFALVDE 233
           R AA+PV+     +   +VC      S         ++A   T  AT+A AHP FALVDE
Sbjct: 32  RAAARPVAGVPVLAMPRIVCSLEKKESNKGDVNGLPQLAAAVTSAATMAYAHPVFALVDE 91

Query: 234 RMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 389
           R++ +GTG   GV++P L W+L+GV   +WA++F     L + +D D GL L
Sbjct: 92  RLSTEGTGLGLGVSNPKLTWILVGVTALVWAVYFTYSSTLPEGDD-DSGLSL 142

[15][TOP]
>UniRef100_B9SZ65 Photosystem II reaction center W protein, chloroplast, putative n=1
           Tax=Ricinus communis RepID=B9SZ65_RICCO
          Length = 134

 Score = 70.5 bits (171), Expect = 6e-11
 Identities = 39/80 (48%), Positives = 52/80 (65%)
 Frame = +3

Query: 150 SEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAI 329
           S VA  VA  S + AT  A PA ALVDERM+ +GTG PFG+++ +LGW+LLGVF  +W++
Sbjct: 59  SMVASMVAAASAVAAT--AGPAMALVDERMSTEGTGLPFGLSNNLLGWILLGVFALIWSL 116

Query: 330 WFIGQKDLGDFEDADDGLKL 389
           + +    L   ED D  L L
Sbjct: 117 YTVYTSTLD--EDDDSALSL 134

[16][TOP]
>UniRef100_Q41908 Photosystem II 7kD protein n=1 Tax=Arabidopsis thaliana
           RepID=Q41908_ARATH
          Length = 133

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 38/108 (35%), Positives = 59/108 (54%)
 Frame = +3

Query: 66  APRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNG 245
           AP +   P+ +       ++  K  T +S      A  +     + ++PA ALVDERM+ 
Sbjct: 28  APVLGLPPMGKKKGGVRCSMETKKETSQSWGPGVSAAATAALTAVMSNPAMALVDERMST 87

Query: 246 DGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 389
           +GTG PFG+++ +LGW+L GVFG +W  +F+    L   ED + GL L
Sbjct: 88  EGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYTSTLE--EDEESGLSL 133

[17][TOP]
>UniRef100_B9GS65 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=B9GS65_POPTR
          Length = 134

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
 Frame = +3

Query: 141 TVRSEVAK--KVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFG 314
           TV  E +K    ++++ + A   + PA ALVDERM+ +GTG PFG+++ +L W+LLGVF 
Sbjct: 52  TVEEEKSKGMSASLMAAVCAATISSPALALVDERMSTEGTGLPFGLSNNLLVWILLGVFA 111

Query: 315 TMWAIWFIGQKDLGDFEDADDGLKL 389
            +W+++F+    L   ED D G+ L
Sbjct: 112 FIWSLYFVYTSSLD--EDEDSGMSL 134

[18][TOP]
>UniRef100_B6T2W4 Photosystem II reaction center W protein n=1 Tax=Zea mays
           RepID=B6T2W4_MAIZE
          Length = 131

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 47/128 (36%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
 Frame = +3

Query: 24  ANSTNIKMQALSARAPRVA------AKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLST 185
           A  T   + AL AR+ RV       A PVS  GA +++     A T              
Sbjct: 23  ALGTYAGLPALRARSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTA------------- 69

Query: 186 LPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 365
                +A PA ALVDERM+ +GTG   G+++ +LGW+LLGVFG +W+++ I   DL D +
Sbjct: 70  -----SAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDL-DED 123

Query: 366 DADDGLKL 389
           +   GL L
Sbjct: 124 EESGGLSL 131

[19][TOP]
>UniRef100_B6SMK2 Photosystem II reaction center W protein n=1 Tax=Zea mays
           RepID=B6SMK2_MAIZE
          Length = 130

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 47/123 (38%), Positives = 66/123 (53%), Gaps = 4/123 (3%)
 Frame = +3

Query: 33  TNIKMQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA----TL 200
           T I  +A  AR P     P  R+ +        K     + V+ K A  S L A    T 
Sbjct: 10  TTIVARAAIAR-PNALGLPALRARSERVRCSYAKDAKNAAPVSTKGAGASLLAAAGAVTA 68

Query: 201 AAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDG 380
           +A PA ALVDERM+ +GTG   G+++ +LGW+LLGVFG +W+++ I   DL D ++   G
Sbjct: 69  SAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDL-DEDEESGG 127

Query: 381 LKL 389
           L L
Sbjct: 128 LSL 130

[20][TOP]
>UniRef100_A1YMY4 Component of 6.1 kDa polypeptide of photosystem II reaction center
           n=1 Tax=Brassica rapa RepID=A1YMY4_BRACM
          Length = 133

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 38/112 (33%), Positives = 61/112 (54%)
 Frame = +3

Query: 54  LSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDE 233
           ++  AP +   P+ +       ++  K   V +  A   A  +     + ++PA ALVD+
Sbjct: 24  VAVSAPVLGLPPMGKRKGGVRCSMEPKQGNVSAVGAGVSAAATAALTAVMSNPAMALVDD 83

Query: 234 RMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 389
           RM+ +GTG PFG+++ +LGW+LLGVFG +W  +F     L   ED + GL L
Sbjct: 84  RMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLD--EDEESGLSL 133

[21][TOP]
>UniRef100_Q39194 Photosystem II reaction center W protein, chloroplastic n=2
           Tax=Arabidopsis thaliana RepID=PSBW_ARATH
          Length = 133

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 38/108 (35%), Positives = 58/108 (53%)
 Frame = +3

Query: 66  APRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNG 245
           AP +   P+ +       ++  K   V    A   A  +     + ++PA ALVDERM+ 
Sbjct: 28  APVLGLPPMGKKKGGVRCSMETKQGNVSVMGAGVSAAATAALTAVMSNPAMALVDERMST 87

Query: 246 DGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 389
           +GTG PFG+++ +LGW+L GVFG +W  +F+    L   ED + GL L
Sbjct: 88  EGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYTSSLE--EDEESGLSL 133

[22][TOP]
>UniRef100_Q7XYI4 Photosystem II protein PsbW n=1 Tax=Bigelowiella natans
           RepID=Q7XYI4_BIGNA
          Length = 147

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 45/123 (36%), Positives = 63/123 (51%), Gaps = 3/123 (2%)
 Frame = +3

Query: 30  STNIKMQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRS-EVAKKVAMLSTLPATLAA 206
           S+ +    L A A R    PVS   A    T   K +  ++ +  +K    + L A  A 
Sbjct: 24  SSALSSSNLGATAIRSRVSPVSSVRAGRMATFAQKPSMKQNMQNFQKTMGAAGLAAVGAL 83

Query: 207 H--PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDG 380
           H  PA ALVD R+NGDG G P G+ND  L ++L GVF T+W ++    K + D +D D G
Sbjct: 84  HQLPAEALVDSRLNGDGAGIPLGLNDSRLFFILAGVFTTVWGVYATSVKGISDNDDEDSG 143

Query: 381 LKL 389
           + L
Sbjct: 144 MGL 146

[23][TOP]
>UniRef100_C1N1F2 Photosystem II 13kD protein, chloroplast n=1 Tax=Micromonas pusilla
           CCMP1545 RepID=C1N1F2_9CHLO
          Length = 119

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 5/110 (4%)
 Frame = +3

Query: 75  VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAH--PAFALVDERMNGD 248
           + AKP++R   ++   VV KAT  +++   K A+LS    +LAA   PA A+VDER+NGD
Sbjct: 12  LVAKPLARK-VQARKAVVSKATVAKAQAPTK-AVLSAAVVSLAAQALPALAVVDERLNGD 69

Query: 249 GTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLG---DFEDADDGLKL 389
           GTG   G+ND +LG+VLL +   +++ ++  QKD G     ++ D GL L
Sbjct: 70  GTGLILGLNDELLGFVLLTIPTLIFSQFYAAQKDEGIEAGGKNDDSGLSL 119

[24][TOP]
>UniRef100_A9PJA9 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
           Populus deltoides RepID=A9PJA9_9ROSI
          Length = 133

 Score = 68.6 bits (166), Expect = 2e-10
 Identities = 34/113 (30%), Positives = 61/113 (53%)
 Frame = +3

Query: 51  ALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVD 230
           ++   +  V   P      + + ++  K T          ++++ + A   + PA ALVD
Sbjct: 23  SVGVSSSHVLGLPAIAKKGKVSCSMEGKPTVEEKSKGMSASLMAAVCAATISSPALALVD 82

Query: 231 ERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 389
           ER++ +GTG PFG+++ +L W+LLGVF  +W+++F+    L   ED D G+ L
Sbjct: 83  ERLSTEGTGLPFGLSNNLLVWILLGVFAFIWSLYFVYTSSLD--EDEDSGMSL 133

[25][TOP]
>UniRef100_B9ET99 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
           Group RepID=B9ET99_ORYSJ
          Length = 107

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 8/103 (7%)
 Frame = +3

Query: 105 ARSAVTVVCKATT--------VRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGR 260
           A +A +VV +A          +R+  +++ A  S L     A PA ALVDERM+ +GTG 
Sbjct: 6   AAAATSVVARAVLAGPLGLPQMRARRSERGAGASLLAMAATAAPAMALVDERMSTEGTGL 65

Query: 261 PFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 389
             G+++ +LGW+LLGVFG +W+++ I   DL + E++  GL L
Sbjct: 66  SLGLSNNLLGWILLGVFGLIWSLYTIYTSDLEEDEES-GGLSL 107

[26][TOP]
>UniRef100_A5C3A9 Putative uncharacterized protein n=1 Tax=Vitis vinifera
           RepID=A5C3A9_VITVI
          Length = 70

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 33/72 (45%), Positives = 47/72 (65%)
 Frame = +3

Query: 174 MLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDL 353
           M +      +A PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F     L
Sbjct: 1   MAAAAAVAASAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFTYTATL 60

Query: 354 GDFEDADDGLKL 389
              ED + GL L
Sbjct: 61  E--EDDESGLSL 70

[27][TOP]
>UniRef100_Q9AXP0 PSII subunit PsbW (Fragment) n=1 Tax=Physcomitrella patens
           RepID=Q9AXP0_PHYPA
          Length = 109

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 6/108 (5%)
 Frame = +3

Query: 84  KPVSRSGARSAVTVVCKATTVRSEVAK-----KVAMLSTLPATLA-AHPAFALVDERMNG 245
           +PVS   A     +VC A    S+  +     ++A   T  ATLA AHP FALVDER++ 
Sbjct: 2   EPVSGLPALRMPKIVCSAEKKESQTEELSGFPQLAAAVTSAATLAYAHPVFALVDERLST 61

Query: 246 DGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 389
           +GTG   G+++  L W+L+GV   +WA++F    D+G       GL L
Sbjct: 62  EGTGLGLGISNTKLTWILVGVTALIWALYFFVLLDVGQRVTMTSGLDL 109

[28][TOP]
>UniRef100_Q5ZBY9 Photosystem II reaction center W protein, chloroplastic n=3
           Tax=Oryza sativa RepID=PSBW_ORYSJ
          Length = 124

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 40/107 (37%), Positives = 61/107 (57%)
 Frame = +3

Query: 69  PRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGD 248
           P++ A+   R     +      A  V+   A  +AM +T      A PA ALVDERM+ +
Sbjct: 25  PQMRARRSERVRCNYSKEAATPAAAVKGAGASLLAMAAT------AAPAMALVDERMSTE 78

Query: 249 GTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 389
           GTG   G+++ +LGW+LLGVFG +W+++ I   DL + E++  GL L
Sbjct: 79  GTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDLEEDEES-GGLSL 124

[29][TOP]
>UniRef100_C6SWZ8 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6SWZ8_SOYBN
          Length = 133

 Score = 67.0 bits (162), Expect = 6e-10
 Identities = 30/73 (41%), Positives = 50/73 (68%)
 Frame = +3

Query: 171 AMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKD 350
           ++++   A   + PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +W ++F+    
Sbjct: 63  SLMAAASAAAMSGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFVYTST 122

Query: 351 LGDFEDADDGLKL 389
           L + E++  GL L
Sbjct: 123 LEEGEES--GLSL 133

[30][TOP]
>UniRef100_A9PEP9 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=A9PEP9_POPTR
          Length = 134

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 37/113 (32%), Positives = 59/113 (52%)
 Frame = +3

Query: 51  ALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVD 230
           +L      V   P      R + ++  K +          ++++ + A   + PA ALVD
Sbjct: 24  SLGVSCSPVLGLPAMAKKGRVSCSMEGKPSVEEKCKGMSASLMAAVCAASMSSPALALVD 83

Query: 231 ERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 389
           ERM+ +GTG PFG+++ +L W+LLGVF  +WA++F     L   ED + GL L
Sbjct: 84  ERMSTEGTGLPFGLSNNLLVWILLGVFALIWALYFTYTATLE--EDEESGLSL 134

[31][TOP]
>UniRef100_Q8W536 Photosystem II reaction center (Fragment) n=1 Tax=Retama raetam
           RepID=Q8W536_9FABA
          Length = 96

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 32/72 (44%), Positives = 45/72 (62%)
 Frame = +3

Query: 174 MLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDL 353
           M +   A   + PA ALVDER++ +GTG PFG+++ +LGW+L  VFG +W  +FI    L
Sbjct: 27  MAAACAAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFVVFGLIWTFYFIYASSL 86

Query: 354 GDFEDADDGLKL 389
              ED + GL L
Sbjct: 87  E--EDEESGLSL 96

[32][TOP]
>UniRef100_B5A4J5 Photosystem II reaction center W protein n=1 Tax=Gymnochlora
           stellata RepID=B5A4J5_GYMST
          Length = 147

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 41/106 (38%), Positives = 54/106 (50%), Gaps = 5/106 (4%)
 Frame = +3

Query: 87  PVSRSGARSAVTVVCKATTVRSEVAKKVAMLST---LPATLAAH--PAFALVDERMNGDG 251
           P +R  AR   T V     + +E  K          L AT A H  PA ALVD R+NGDG
Sbjct: 41  PATRMMARQGRTAVYAKKGLNTESLKNFQRNMAAVGLSATAALHQLPAEALVDARLNGDG 100

Query: 252 TGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGLKL 389
            G P G+ND  L ++L GVF  +WA +    K + + +D D GL +
Sbjct: 101 AGIPLGINDSRLFFILAGVFTLVWAAYSTSVKGISNNDDDDSGLSI 146

[33][TOP]
>UniRef100_B6TMB3 Photosystem II reaction center W protein n=1 Tax=Zea mays
           RepID=B6TMB3_MAIZE
          Length = 127

 Score = 63.9 bits (154), Expect = 5e-09
 Identities = 30/73 (41%), Positives = 47/73 (64%)
 Frame = +3

Query: 171 AMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKD 350
           ++L+   + +   P  ALVDERM+ +GTG   G+++ +LGW+LLGVFG +W+++ +    
Sbjct: 57  SLLAVATSAVTTSPXLALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYTST 116

Query: 351 LGDFEDADDGLKL 389
           L   ED D GL L
Sbjct: 117 LD--EDDDSGLSL 127

[34][TOP]
>UniRef100_A9SEQ5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9SEQ5_PHYPA
          Length = 64

 Score = 63.5 bits (153), Expect = 7e-09
 Identities = 30/62 (48%), Positives = 42/62 (67%)
 Frame = +3

Query: 204 AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDADDGL 383
           AHP FALVDER++ +GTG   GV++P L W+L+GV   +WA++F     L + +D D GL
Sbjct: 4   AHPVFALVDERLSTEGTGLGLGVSNPKLTWILVGVTALVWAVYFTYSSTLPEGDD-DSGL 62

Query: 384 KL 389
            L
Sbjct: 63  SL 64

[35][TOP]
>UniRef100_C0PQQ7 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=C0PQQ7_PICSI
          Length = 149

 Score = 63.2 bits (152), Expect = 9e-09
 Identities = 29/65 (44%), Positives = 45/65 (69%)
 Frame = +3

Query: 195 TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDAD 374
           T++   AFALVDER++ +GTG   G+++P+LGW+L+GVF  +W ++F    ++   ED D
Sbjct: 87  TVSTKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWILYFTTYSNVK--EDED 144

Query: 375 DGLKL 389
            GL L
Sbjct: 145 SGLSL 149

[36][TOP]
>UniRef100_A9NLC2 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=A9NLC2_PICSI
          Length = 146

 Score = 63.2 bits (152), Expect = 9e-09
 Identities = 30/65 (46%), Positives = 44/65 (67%)
 Frame = +3

Query: 195 TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDAD 374
           T++   AFALVDER++ +GTG   G+++P+LGW+L+GVF  +W ++F      G  ED D
Sbjct: 84  TVSTKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWILYFTTYS--GVKEDED 141

Query: 375 DGLKL 389
            GL L
Sbjct: 142 SGLSL 146

[37][TOP]
>UniRef100_A9NL01 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=A9NL01_PICSI
          Length = 146

 Score = 63.2 bits (152), Expect = 9e-09
 Identities = 29/65 (44%), Positives = 45/65 (69%)
 Frame = +3

Query: 195 TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFEDAD 374
           T++   AFALVDER++ +GTG   G+++P+LGW+L+GVF  +W ++F    ++   ED D
Sbjct: 84  TVSTKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWILYFTTYSNVK--EDED 141

Query: 375 DGLKL 389
            GL L
Sbjct: 142 SGLSL 146

[38][TOP]
>UniRef100_A4RT20 Photosystem II reaction center W protein, chloroplast n=1
           Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RT20_OSTLU
          Length = 162

 Score = 62.4 bits (150), Expect = 2e-08
 Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
 Frame = +3

Query: 117 VTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWV 296
           + +V  + T   E+ K+VA    L + +   PA A+VD+R+NGDGTG P G+ND  LG +
Sbjct: 68  IRLVTMSATAPQEMGKRVAGSFALSSMVNVLPALAIVDDRLNGDGTGLPLGINDGALGII 127

Query: 297 LLGVFGTMWAIWFIGQKD----LGDFEDADDGLKL 389
           L  V   ++ ++FI  K     +   +D D GL L
Sbjct: 128 LATVPLAIFGLYFIAGKQDASIVAGGKDDDSGLSL 162

[39][TOP]
>UniRef100_Q01EE1 Photosystem II 13kD Protein, chloroplast (Putative) (IC) n=1
           Tax=Ostreococcus tauri RepID=Q01EE1_OSTTA
          Length = 156

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 48/132 (36%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
 Frame = +3

Query: 21  RANSTNIKMQALSARAPRVAAKPVSRSGARSAVT----VVCKATTVRSEVAKKVAMLSTL 188
           R  S+ I +  LS+ +P     P  R+G R A      V  +AT    E  K+V   S L
Sbjct: 28  RDKSSTIMLTILSSLSPICNLSP-RRAGPRQASNQRHGVTVRATP--QEAGKQVFGTSML 84

Query: 189 PATL-AAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI-GQKDLG-- 356
            +++    PA A+VD+R+NGDGTG P G+ND  LG +L  V   +++++FI G++D G  
Sbjct: 85  ISSMNTVLPALAIVDDRLNGDGTGLPLGINDGALGIILASVPLAIFSLYFIAGKQDAGIE 144

Query: 357 -DFEDADDGLKL 389
              ++ D GL L
Sbjct: 145 NGGKNDDSGLSL 156

[40][TOP]
>UniRef100_Q9AXN9 PSII subunit PsbW (Fragment) n=2 Tax=Physcomitrella patens
           RepID=Q9AXN9_PHYPA
          Length = 69

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
 Frame = +3

Query: 192 ATLA-AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFED 368
           ATLA AHP FALVDER++ +GTG   G+++  L W+L+GV   +WA++F     L + +D
Sbjct: 4   ATLAYAHPVFALVDERLSTEGTGLGLGISNTKLTWILVGVTALIWALYFSYSSTLPEGDD 63

Query: 369 ADDGLKL 389
            D GL L
Sbjct: 64  -DSGLDL 69

[41][TOP]
>UniRef100_Q10NF9 Retrotransposon protein, putative, unclassified, expressed n=1
           Tax=Oryza sativa Japonica Group RepID=Q10NF9_ORYSJ
          Length = 840

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 46/101 (45%), Positives = 52/101 (51%), Gaps = 1/101 (0%)
 Frame = -2

Query: 399 KPFTASGHRRRPRSRPGPSGR*TR*PTWCRRRPAGPSPGRGRSRRRGGQCRRRSCAHRPG 220
           +P + S  RRRPRS P P  R  R P+  RRRP  PSPGR R  R     RRR  +  PG
Sbjct: 343 RPRSPSPGRRRPRS-PSPGRRRPRSPSPGRRRPRSPSPGR-RRPRSPSPGRRRPRSRSPG 400

Query: 219 RRRGGQP-G*PAGCSAWRPSWPPRCGRWWPCTPRSRQSERR 100
           RRR   P G P   S  RP       R  P +PRSR + RR
Sbjct: 401 RRRSPSPRGSPRLRSPKRP-------RRSPISPRSRSANRR 434

[42][TOP]
>UniRef100_Q9AXN8 PSII subunit PsbW (Fragment) n=1 Tax=Physcomitrella patens
           RepID=Q9AXN8_PHYPA
          Length = 158

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
 Frame = +3

Query: 30  STNIKMQALSARAPRVAA--KPVSRSGARSAVTVVCKATTVRSEVAK-----KVAMLSTL 188
           +T +   +L++ +   AA  KPV+   A     VVC A    S+  +     ++A   T 
Sbjct: 21  ATRLATTSLASSSSGFAATLKPVAGLPALRMPKVVCAAERSESKAERVNGVAQLAAAVTS 80

Query: 189 PATLA-AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 338
            ATLA +HP  ALVDER++ +GTG   G+++  L W+L+GV   +W ++ +
Sbjct: 81  AATLAYSHPVLALVDERLSTEGTGLGLGISNTKLTWILVGVTALIWTLYLL 131

[43][TOP]
>UniRef100_A2SY30 Photosystem II reaction center W protein n=1 Tax=Mesostigma viride
           RepID=A2SY30_MESVI
          Length = 128

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 38/107 (35%), Positives = 58/107 (54%)
 Frame = +3

Query: 48  QALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALV 227
           Q L AR P+ AA+ V    AR AV  VC+A    + VA   A +++  A  A  PA A++
Sbjct: 22  QRLVARKPQAAAR-VPAKCARKAV--VCQAQKNEAAVAVSAAAIASSVAFAA--PAQAII 76

Query: 228 DERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFED 368
           ++ M  +G G   G+N   LG+V+LG F  +W+++    + L   ED
Sbjct: 77  EDAMYTEGAGIALGLNSGALGFVMLGAFTLVWSLYSSYTRSLDSSED 123

[44][TOP]
>UniRef100_UPI0001B4E4AC transcriptional regulator, SARP family protein n=1 Tax=Streptomyces
           hygroscopicus ATCC 53653 RepID=UPI0001B4E4AC
          Length = 1279

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 36/95 (37%), Positives = 45/95 (47%)
 Frame = -3

Query: 341 ADEPDSPHGAEDAQQDPAQDGVVHAEGAASAVAVHALIDQGEGGVGSQGSRQGAQHGDLL 162
           A E  +  G+  A  D +  G  +A GA  A         G G  G  GS  GA+ G  +
Sbjct: 251 ASEDRTGSGSGPAPGDGSAPGAAYASGAGHAPG------DGTGPGGGYGS--GARPGPGV 302

Query: 161 GHLAADGGGLAHHGHGRASAGAAHGLGSHAGGASG 57
           GH+  DG G  H   GR + GA H  GS AGGA+G
Sbjct: 303 GHVPGDGAGAGHVPGGRTAPGAGHAPGSGAGGAAG 337

[45][TOP]
>UniRef100_B5I0L6 ABC transporter ATP-binding protein n=1 Tax=Streptomyces sviceus
           ATCC 29083 RepID=B5I0L6_9ACTO
          Length = 331

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 44/127 (34%), Positives = 48/127 (37%)
 Frame = +2

Query: 2   PSHLASSRQLHKHQNAGPVRSRPPRGCQAREPLRRSLCRDRGVQGHHRPQRGGQEGRHAE 181
           PS     R  H+H   G  R         R P R +  R R   GH   +RGG+ G   E
Sbjct: 7   PSERPRRRPPHRHPAPGGTRQST-----RRLPERPAPRRTRRRSGH---RRGGRPGPRPE 58

Query: 182 HPAGYPGCPPRLRPGR*AHERRRHWPPLRRERPRPGLGPAGRLRHHVGYLVHRPEGPGRL 361
            P G                  RH PP RR RPRPG  P GR   H G   HR   PG  
Sbjct: 59  VPRG-----------------GRHRPPRRRARPRPGRRPRGRRARHDGGPHHRLRPPGPR 101

Query: 362 RGRRRWP 382
            G  R P
Sbjct: 102 AGHARRP 108