[UP]
[1][TOP]
>UniRef100_Q9SPI9 Photosystem II reaction center W protein, chloroplastic n=2
Tax=Chlamydomonas reinhardtii RepID=PSBW_CHLRE
Length = 115
Score = 215 bits (548), Expect = 1e-54
Identities = 107/107 (100%), Positives = 107/107 (100%)
Frame = +1
Query: 31 MQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFAL 210
MQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFAL
Sbjct: 1 MQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFAL 60
Query: 211 VDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 351
VDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE
Sbjct: 61 VDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 107
[2][TOP]
>UniRef100_C1FIQ5 Photosystem II 13kD protein, chloroplast n=1 Tax=Micromonas sp.
RCC299 RepID=C1FIQ5_9CHLO
Length = 118
Score = 75.9 bits (185), Expect = 1e-12
Identities = 46/96 (47%), Positives = 61/96 (63%), Gaps = 2/96 (2%)
Frame = +1
Query: 61 VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAH--PAFALVDERMNGD 234
VAAKP +R AR A V KAT ++ V KK A+LS L A PA A+VDER+NGD
Sbjct: 12 VAAKPAARKVARKAT--VAKATVAKASVPKK-AVLSAAVTGLVAQTLPALAVVDERLNGD 68
Query: 235 GTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLG 342
GTG G+ND +LG++LL + +++ +F QKD G
Sbjct: 69 GTGLILGINDEILGFILLTIPALVFSQFFYAQKDDG 104
[3][TOP]
>UniRef100_Q41387 Photosystem II reaction center W protein, chloroplastic n=1
Tax=Spinacia oleracea RepID=PSBW_SPIOL
Length = 137
Score = 72.4 bits (176), Expect = 1e-11
Identities = 32/76 (42%), Positives = 51/76 (67%)
Frame = +1
Query: 124 TTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGT 303
TT + + ++L+ A ++PA ALVDERM+ +GTG PFG+++ +LGW+L GVFG
Sbjct: 56 TTTTTNKSMGASLLAAAAAATISNPAMALVDERMSTEGTGLPFGLSNNLLGWILFGVFGL 115
Query: 304 MWAIWFIGQKDLGDFE 351
+WA++F+ L + E
Sbjct: 116 IWALYFVYASGLEEDE 131
[4][TOP]
>UniRef100_C6SYI0 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SYI0_SOYBN
Length = 132
Score = 71.2 bits (173), Expect = 3e-11
Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 11/112 (9%)
Frame = +1
Query: 49 RAPRVAAKPVSRSGARS-AVTVVCKATTVRSEVAKK----------VAMLSTLPATLAAH 195
RA V +PV S + + + KA VR + +K ++L+ A +
Sbjct: 15 RAGLVLKRPVGASSSTVLGLPAMAKAGKVRCSMEEKPSSSSNIGMGASLLAAAVAATMSS 74
Query: 196 PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 351
PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F+ L + E
Sbjct: 75 PAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYASTLEEDE 126
[5][TOP]
>UniRef100_B4FUI4 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B4FUI4_MAIZE
Length = 127
Score = 70.5 bits (171), Expect = 6e-11
Identities = 41/108 (37%), Positives = 60/108 (55%), Gaps = 11/108 (10%)
Frame = +1
Query: 61 VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA-----------TLAAHPAFA 207
VA ++R A + ++ VR AK A +ST A T +A PA A
Sbjct: 13 VARAAIARPNALGLPALRARSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTASAGPALA 72
Query: 208 LVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 351
LVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ I DL + E
Sbjct: 73 LVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDLDEDE 120
[6][TOP]
>UniRef100_B6TM37 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B6TM37_MAIZE
Length = 127
Score = 69.7 bits (169), Expect = 1e-10
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Frame = +1
Query: 61 VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA-----------TLAAHPAFA 207
VA ++R A + + VR AK A +ST A T +A PA A
Sbjct: 13 VARAAIARPNALGLPALRASSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTASAGPALA 72
Query: 208 LVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 351
LVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ I DL + E
Sbjct: 73 LVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDLDEDE 120
[7][TOP]
>UniRef100_C6T2W3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T2W3_SOYBN
Length = 133
Score = 69.3 bits (168), Expect = 1e-10
Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 12/113 (10%)
Frame = +1
Query: 49 RAPRVAAKPVSRSGARS-AVTVVCKATTVRSEVAKKVAMLSTL-----------PATLAA 192
R V +PV S + + + KA VR + +K + S L AT+++
Sbjct: 15 RTGHVLKRPVGASSSTVLGLPAMAKAGRVRCSMEEKPSSSSNLGMGASLLAAAAAATMSS 74
Query: 193 HPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 351
A ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F+ L + E
Sbjct: 75 PAAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALFFVYTSTLEEDE 127
[8][TOP]
>UniRef100_C6SWM3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SWM3_SOYBN
Length = 136
Score = 69.3 bits (168), Expect = 1e-10
Identities = 37/113 (32%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
Frame = +1
Query: 25 IKMQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAH--- 195
++ ++L +P + + + G R + ++ K ++V+ + + M ++L A +A
Sbjct: 19 VQKRSLGFSSPVLGLPAMGKVG-RVSCSMEEKPSSVKESSSSMLGMGASLMAAASAAAMS 77
Query: 196 -PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 351
PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F+ L + E
Sbjct: 78 GPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYFVYTSSLEEDE 130
[9][TOP]
>UniRef100_C5XLL1 Putative uncharacterized protein Sb03g036090 n=1 Tax=Sorghum
bicolor RepID=C5XLL1_SORBI
Length = 126
Score = 68.9 bits (167), Expect = 2e-10
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 13/120 (10%)
Frame = +1
Query: 31 MQALSARAPR--VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA-------- 180
M +SA A VA ++R A + ++ VR AK A +S A
Sbjct: 1 MATVSAAAATTVVARAAIARPNALGLPQLRARSERVRCSYAKDAAAVSAKAAGASLLAAA 60
Query: 181 ---TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 351
T +A PA ALVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ + DL + E
Sbjct: 61 GAVTASAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTVYTSDLDEDE 120
[10][TOP]
>UniRef100_B7FHC2 Putative uncharacterized protein n=1 Tax=Medicago truncatula
RepID=B7FHC2_MEDTR
Length = 136
Score = 68.9 bits (167), Expect = 2e-10
Identities = 34/69 (49%), Positives = 49/69 (71%)
Frame = +1
Query: 145 AKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 324
A +A +S ATL++ A ALVDERM+ +GTG PFG+++ +LGW+L GVFG +WA++FI
Sbjct: 64 ASLIAAISA--ATLSSPAAMALVDERMSTEGTGLPFGLSNNLLGWLLFGVFGLIWALYFI 121
Query: 325 GQKDLGDFE 351
L + E
Sbjct: 122 YASSLDEDE 130
[11][TOP]
>UniRef100_A7PUM2 Chromosome chr7 scaffold_31, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7PUM2_VITVI
Length = 135
Score = 68.9 bits (167), Expect = 2e-10
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 17/107 (15%)
Frame = +1
Query: 55 PRVAAKP----VSRSGARSAVTVVCKATTVRSEVAKK-------------VAMLSTLPAT 183
PRV +P V S A + V+ K V + +K ++++ A
Sbjct: 14 PRVGLRPNGGTVGTSSAILGLPVMAKKGRVTCSMKEKPSVEDGSLKMGMGASLMAAACAA 73
Query: 184 LAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 324
+ PA ALVDERM+ +GTG PFG+++ LGW+L GVFG +WA++F+
Sbjct: 74 TMSSPAMALVDERMSTEGTGLPFGLSNNTLGWILFGVFGLIWALYFV 120
[12][TOP]
>UniRef100_B6T2W4 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B6T2W4_MAIZE
Length = 131
Score = 68.2 bits (165), Expect = 3e-10
Identities = 44/120 (36%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
Frame = +1
Query: 10 ANSTNIKMQALSARAPRVA------AKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLST 171
A T + AL AR+ RV A PVS GA +++ A T
Sbjct: 23 ALGTYAGLPALRARSERVRCSYAKDAAPVSTKGAGASLLAAAGAVTA------------- 69
Query: 172 LPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 351
+A PA ALVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ I DL + E
Sbjct: 70 -----SAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDLDEDE 124
[13][TOP]
>UniRef100_B6SMK2 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B6SMK2_MAIZE
Length = 130
Score = 68.2 bits (165), Expect = 3e-10
Identities = 44/115 (38%), Positives = 62/115 (53%), Gaps = 4/115 (3%)
Frame = +1
Query: 19 TNIKMQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPA----TL 186
T I +A AR P P R+ + K + V+ K A S L A T
Sbjct: 10 TTIVARAAIAR-PNALGLPALRARSERVRCSYAKDAKNAAPVSTKGAGASLLAAAGAVTA 68
Query: 187 AAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 351
+A PA ALVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ I DL + E
Sbjct: 69 SAGPALALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDLDEDE 123
[14][TOP]
>UniRef100_C1N1F2 Photosystem II 13kD protein, chloroplast n=1 Tax=Micromonas pusilla
CCMP1545 RepID=C1N1F2_9CHLO
Length = 119
Score = 67.8 bits (164), Expect = 4e-10
Identities = 41/96 (42%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Frame = +1
Query: 61 VAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAH--PAFALVDERMNGD 234
+ AKP++R ++ VV KAT +++ K A+LS +LAA PA A+VDER+NGD
Sbjct: 12 LVAKPLARK-VQARKAVVSKATVAKAQAPTK-AVLSAAVVSLAAQALPALAVVDERLNGD 69
Query: 235 GTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLG 342
GTG G+ND +LG+VLL + +++ ++ QKD G
Sbjct: 70 GTGLILGLNDELLGFVLLTIPTLIFSQFYAAQKDEG 105
[15][TOP]
>UniRef100_B9SZ65 Photosystem II reaction center W protein, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9SZ65_RICCO
Length = 134
Score = 67.4 bits (163), Expect = 5e-10
Identities = 33/63 (52%), Positives = 46/63 (73%)
Frame = +1
Query: 136 SEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAI 315
S VA VA S + AT A PA ALVDERM+ +GTG PFG+++ +LGW+LLGVF +W++
Sbjct: 59 SMVASMVAAASAVAAT--AGPAMALVDERMSTEGTGLPFGLSNNLLGWILLGVFALIWSL 116
Query: 316 WFI 324
+ +
Sbjct: 117 YTV 119
[16][TOP]
>UniRef100_B9S4T1 Photosystem II reaction center W protein, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9S4T1_RICCO
Length = 132
Score = 67.4 bits (163), Expect = 5e-10
Identities = 29/73 (39%), Positives = 48/73 (65%)
Frame = +1
Query: 133 RSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWA 312
RS ++++++ + PA ALVDER++ +GTG PFG+++ +LGW+LLGVFG +W+
Sbjct: 54 RSNKGMSASLIASICGVTMSSPALALVDERLSTEGTGLPFGLSNNLLGWILLGVFGLIWS 113
Query: 313 IWFIGQKDLGDFE 351
+ + L D E
Sbjct: 114 FYTVYTSTLDDDE 126
[17][TOP]
>UniRef100_A7QVP6 Chromosome chr14 scaffold_190, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QVP6_VITVI
Length = 135
Score = 67.0 bits (162), Expect = 6e-10
Identities = 31/67 (46%), Positives = 48/67 (71%), Gaps = 5/67 (7%)
Frame = +1
Query: 136 SEVAKKVAMLSTLPATLAA-----HPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFG 300
S++ ++M ++L A AA PA ALVDER++ +GTG PFG+++ +LGW+L GVFG
Sbjct: 53 SDMGSSISMGASLMAAAAAVAASAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFG 112
Query: 301 TMWAIWF 321
+WA++F
Sbjct: 113 LIWALYF 119
[18][TOP]
>UniRef100_B9ET99 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
Group RepID=B9ET99_ORYSJ
Length = 107
Score = 66.6 bits (161), Expect = 8e-10
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 8/95 (8%)
Frame = +1
Query: 91 ARSAVTVVCKATT--------VRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGR 246
A +A +VV +A +R+ +++ A S L A PA ALVDERM+ +GTG
Sbjct: 6 AAAATSVVARAVLAGPLGLPQMRARRSERGAGASLLAMAATAAPAMALVDERMSTEGTGL 65
Query: 247 PFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 351
G+++ +LGW+LLGVFG +W+++ I DL + E
Sbjct: 66 SLGLSNNLLGWILLGVFGLIWSLYTIYTSDLEEDE 100
[19][TOP]
>UniRef100_Q41908 Photosystem II 7kD protein n=1 Tax=Arabidopsis thaliana
RepID=Q41908_ARATH
Length = 133
Score = 66.2 bits (160), Expect = 1e-09
Identities = 34/100 (34%), Positives = 55/100 (55%)
Frame = +1
Query: 52 APRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNG 231
AP + P+ + ++ K T +S A + + ++PA ALVDERM+
Sbjct: 28 APVLGLPPMGKKKGGVRCSMETKKETSQSWGPGVSAAATAALTAVMSNPAMALVDERMST 87
Query: 232 DGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 351
+GTG PFG+++ +LGW+L GVFG +W +F+ L + E
Sbjct: 88 EGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYTSTLEEDE 127
[20][TOP]
>UniRef100_A9SEQ6 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9SEQ6_PHYPA
Length = 142
Score = 66.2 bits (160), Expect = 1e-09
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 6/94 (6%)
Frame = +1
Query: 58 RVAAKPVSRSGARSAVTVVCKATTVRSEVAK-----KVAMLSTLPATLA-AHPAFALVDE 219
R AA+PV+ + +VC S ++A T AT+A AHP FALVDE
Sbjct: 32 RAAARPVAGVPVLAMPRIVCSLEKKESNKGDVNGLPQLAAAVTSAATMAYAHPVFALVDE 91
Query: 220 RMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWF 321
R++ +GTG GV++P L W+L+GV +WA++F
Sbjct: 92 RLSTEGTGLGLGVSNPKLTWILVGVTALVWAVYF 125
[21][TOP]
>UniRef100_Q5ZBY9 Photosystem II reaction center W protein, chloroplastic n=3
Tax=Oryza sativa RepID=PSBW_ORYSJ
Length = 124
Score = 66.2 bits (160), Expect = 1e-09
Identities = 37/99 (37%), Positives = 56/99 (56%)
Frame = +1
Query: 55 PRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGD 234
P++ A+ R + A V+ A +AM +T A PA ALVDERM+ +
Sbjct: 25 PQMRARRSERVRCNYSKEAATPAAAVKGAGASLLAMAAT------AAPAMALVDERMSTE 78
Query: 235 GTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 351
GTG G+++ +LGW+LLGVFG +W+++ I DL + E
Sbjct: 79 GTGLSLGLSNNLLGWILLGVFGLIWSLYTIYTSDLEEDE 117
[22][TOP]
>UniRef100_Q9AXP0 PSII subunit PsbW (Fragment) n=1 Tax=Physcomitrella patens
RepID=Q9AXP0_PHYPA
Length = 109
Score = 65.9 bits (159), Expect = 1e-09
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Frame = +1
Query: 70 KPVSRSGARSAVTVVCKATTVRSEVAK-----KVAMLSTLPATLA-AHPAFALVDERMNG 231
+PVS A +VC A S+ + ++A T ATLA AHP FALVDER++
Sbjct: 2 EPVSGLPALRMPKIVCSAEKKESQTEELSGFPQLAAAVTSAATLAYAHPVFALVDERLST 61
Query: 232 DGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLG 342
+GTG G+++ L W+L+GV +WA++F D+G
Sbjct: 62 EGTGLGLGISNTKLTWILVGVTALIWALYFFVLLDVG 98
[23][TOP]
>UniRef100_A1YMY4 Component of 6.1 kDa polypeptide of photosystem II reaction center
n=1 Tax=Brassica rapa RepID=A1YMY4_BRACM
Length = 133
Score = 65.9 bits (159), Expect = 1e-09
Identities = 34/104 (32%), Positives = 57/104 (54%)
Frame = +1
Query: 40 LSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDE 219
++ AP + P+ + ++ K V + A A + + ++PA ALVD+
Sbjct: 24 VAVSAPVLGLPPMGKRKGGVRCSMEPKQGNVSAVGAGVSAAATAALTAVMSNPAMALVDD 83
Query: 220 RMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 351
RM+ +GTG PFG+++ +LGW+LLGVFG +W +F L + E
Sbjct: 84 RMSTEGTGLPFGLSNNLLGWILLGVFGLIWTFYFTYTSSLDEDE 127
[24][TOP]
>UniRef100_Q39194 Photosystem II reaction center W protein, chloroplastic n=2
Tax=Arabidopsis thaliana RepID=PSBW_ARATH
Length = 133
Score = 65.9 bits (159), Expect = 1e-09
Identities = 34/100 (34%), Positives = 54/100 (54%)
Frame = +1
Query: 52 APRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNG 231
AP + P+ + ++ K V A A + + ++PA ALVDERM+
Sbjct: 28 APVLGLPPMGKKKGGVRCSMETKQGNVSVMGAGVSAAATAALTAVMSNPAMALVDERMST 87
Query: 232 DGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 351
+GTG PFG+++ +LGW+L GVFG +W +F+ L + E
Sbjct: 88 EGTGLPFGLSNNLLGWILFGVFGLIWTFFFVYTSSLEEDE 127
[25][TOP]
>UniRef100_C6SWZ8 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6SWZ8_SOYBN
Length = 133
Score = 65.5 bits (158), Expect = 2e-09
Identities = 27/65 (41%), Positives = 45/65 (69%)
Frame = +1
Query: 157 AMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKD 336
++++ A + PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +W ++F+
Sbjct: 63 SLMAAASAAAMSGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWTLYFVYTST 122
Query: 337 LGDFE 351
L + E
Sbjct: 123 LEEGE 127
[26][TOP]
>UniRef100_B9GS65 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=B9GS65_POPTR
Length = 134
Score = 65.5 bits (158), Expect = 2e-09
Identities = 31/77 (40%), Positives = 51/77 (66%), Gaps = 2/77 (2%)
Frame = +1
Query: 127 TVRSEVAK--KVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFG 300
TV E +K ++++ + A + PA ALVDERM+ +GTG PFG+++ +L W+LLGVF
Sbjct: 52 TVEEEKSKGMSASLMAAVCAATISSPALALVDERMSTEGTGLPFGLSNNLLVWILLGVFA 111
Query: 301 TMWAIWFIGQKDLGDFE 351
+W+++F+ L + E
Sbjct: 112 FIWSLYFVYTSSLDEDE 128
[27][TOP]
>UniRef100_A5C3A9 Putative uncharacterized protein n=1 Tax=Vitis vinifera
RepID=A5C3A9_VITVI
Length = 70
Score = 65.5 bits (158), Expect = 2e-09
Identities = 27/54 (50%), Positives = 40/54 (74%)
Frame = +1
Query: 160 MLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWF 321
M + +A PA ALVDER++ +GTG PFG+++ +LGW+L GVFG +WA++F
Sbjct: 1 MAAAAAVAASAGPAMALVDERLSTEGTGLPFGLSNNLLGWILFGVFGLIWALYF 54
[28][TOP]
>UniRef100_A9PJA9 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJA9_9ROSI
Length = 133
Score = 64.3 bits (155), Expect = 4e-09
Identities = 30/105 (28%), Positives = 57/105 (54%)
Frame = +1
Query: 37 ALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVD 216
++ + V P + + ++ K T ++++ + A + PA ALVD
Sbjct: 23 SVGVSSSHVLGLPAIAKKGKVSCSMEGKPTVEEKSKGMSASLMAAVCAATISSPALALVD 82
Query: 217 ERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGDFE 351
ER++ +GTG PFG+++ +L W+LLGVF +W+++F+ L + E
Sbjct: 83 ERLSTEGTGLPFGLSNNLLVWILLGVFAFIWSLYFVYTSSLDEDE 127
[29][TOP]
>UniRef100_A9PEP9 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PEP9_POPTR
Length = 134
Score = 62.8 bits (151), Expect = 1e-08
Identities = 31/95 (32%), Positives = 52/95 (54%)
Frame = +1
Query: 37 ALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVD 216
+L V P R + ++ K + ++++ + A + PA ALVD
Sbjct: 24 SLGVSCSPVLGLPAMAKKGRVSCSMEGKPSVEEKCKGMSASLMAAVCAASMSSPALALVD 83
Query: 217 ERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWF 321
ERM+ +GTG PFG+++ +L W+LLGVF +WA++F
Sbjct: 84 ERMSTEGTGLPFGLSNNLLVWILLGVFALIWALYF 118
[30][TOP]
>UniRef100_Q8W536 Photosystem II reaction center (Fragment) n=1 Tax=Retama raetam
RepID=Q8W536_9FABA
Length = 96
Score = 62.0 bits (149), Expect = 2e-08
Identities = 28/64 (43%), Positives = 41/64 (64%)
Frame = +1
Query: 160 MLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDL 339
M + A + PA ALVDER++ +GTG PFG+++ +LGW+L VFG +W +FI L
Sbjct: 27 MAAACAAATMSSPAMALVDERLSTEGTGLPFGLSNNLLGWILFVVFGLIWTFYFIYASSL 86
Query: 340 GDFE 351
+ E
Sbjct: 87 EEDE 90
[31][TOP]
>UniRef100_Q7XYI4 Photosystem II protein PsbW n=1 Tax=Bigelowiella natans
RepID=Q7XYI4_BIGNA
Length = 147
Score = 60.8 bits (146), Expect = 4e-08
Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 3/113 (2%)
Frame = +1
Query: 16 STNIKMQALSARAPRVAAKPVSRSGARSAVTVVCKATTVRS-EVAKKVAMLSTLPATLAA 192
S+ + L A A R PVS A T K + ++ + +K + L A A
Sbjct: 24 SSALSSSNLGATAIRSRVSPVSSVRAGRMATFAQKPSMKQNMQNFQKTMGAAGLAAVGAL 83
Query: 193 H--PAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGD 345
H PA ALVD R+NGDG G P G+ND L ++L GVF T+W ++ K + D
Sbjct: 84 HQLPAEALVDSRLNGDGAGIPLGLNDSRLFFILAGVFTTVWGVYATSVKGISD 136
[32][TOP]
>UniRef100_Q01EE1 Photosystem II 13kD Protein, chloroplast (Putative) (IC) n=1
Tax=Ostreococcus tauri RepID=Q01EE1_OSTTA
Length = 156
Score = 60.8 bits (146), Expect = 4e-08
Identities = 44/118 (37%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Frame = +1
Query: 7 RANSTNIKMQALSARAPRVAAKPVSRSGARSAVT----VVCKATTVRSEVAKKVAMLSTL 174
R S+ I + LS+ +P P R+G R A V +AT E K+V S L
Sbjct: 28 RDKSSTIMLTILSSLSPICNLSP-RRAGPRQASNQRHGVTVRATP--QEAGKQVFGTSML 84
Query: 175 PATL-AAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI-GQKDLG 342
+++ PA A+VD+R+NGDGTG P G+ND LG +L V +++++FI G++D G
Sbjct: 85 ISSMNTVLPALAIVDDRLNGDGTGLPLGINDGALGIILASVPLAIFSLYFIAGKQDAG 142
[33][TOP]
>UniRef100_A4RT20 Photosystem II reaction center W protein, chloroplast n=1
Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RT20_OSTLU
Length = 162
Score = 59.7 bits (143), Expect = 1e-07
Identities = 30/77 (38%), Positives = 46/77 (59%)
Frame = +1
Query: 103 VTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWV 282
+ +V + T E+ K+VA L + + PA A+VD+R+NGDGTG P G+ND LG +
Sbjct: 68 IRLVTMSATAPQEMGKRVAGSFALSSMVNVLPALAIVDDRLNGDGTGLPLGINDGALGII 127
Query: 283 LLGVFGTMWAIWFIGQK 333
L V ++ ++FI K
Sbjct: 128 LATVPLAIFGLYFIAGK 144
[34][TOP]
>UniRef100_A9SEQ5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9SEQ5_PHYPA
Length = 64
Score = 58.9 bits (141), Expect = 2e-07
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = +1
Query: 190 AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWF 321
AHP FALVDER++ +GTG GV++P L W+L+GV +WA++F
Sbjct: 4 AHPVFALVDERLSTEGTGLGLGVSNPKLTWILVGVTALVWAVYF 47
[35][TOP]
>UniRef100_Q9AXN8 PSII subunit PsbW (Fragment) n=1 Tax=Physcomitrella patens
RepID=Q9AXN8_PHYPA
Length = 158
Score = 58.5 bits (140), Expect = 2e-07
Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
Frame = +1
Query: 16 STNIKMQALSARAPRVAA--KPVSRSGARSAVTVVCKATTVRSEVAK-----KVAMLSTL 174
+T + +L++ + AA KPV+ A VVC A S+ + ++A T
Sbjct: 21 ATRLATTSLASSSSGFAATLKPVAGLPALRMPKVVCAAERSESKAERVNGVAQLAAAVTS 80
Query: 175 PATLA-AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 324
ATLA +HP ALVDER++ +GTG G+++ L W+L+GV +W ++ +
Sbjct: 81 AATLAYSHPVLALVDERLSTEGTGLGLGISNTKLTWILVGVTALIWTLYLL 131
[36][TOP]
>UniRef100_B6TMB3 Photosystem II reaction center W protein n=1 Tax=Zea mays
RepID=B6TMB3_MAIZE
Length = 127
Score = 58.5 bits (140), Expect = 2e-07
Identities = 23/56 (41%), Positives = 40/56 (71%)
Frame = +1
Query: 157 AMLSTLPATLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWFI 324
++L+ + + P ALVDERM+ +GTG G+++ +LGW+LLGVFG +W+++ +
Sbjct: 57 SLLAVATSAVTTSPXLALVDERMSTEGTGLSLGLSNNLLGWILLGVFGLIWSLYTV 112
[37][TOP]
>UniRef100_C0PQQ7 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=C0PQQ7_PICSI
Length = 149
Score = 58.2 bits (139), Expect = 3e-07
Identities = 23/47 (48%), Positives = 37/47 (78%)
Frame = +1
Query: 181 TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWF 321
T++ AFALVDER++ +GTG G+++P+LGW+L+GVF +W ++F
Sbjct: 87 TVSTKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWILYF 133
[38][TOP]
>UniRef100_A9NLC2 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NLC2_PICSI
Length = 146
Score = 58.2 bits (139), Expect = 3e-07
Identities = 23/47 (48%), Positives = 37/47 (78%)
Frame = +1
Query: 181 TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWF 321
T++ AFALVDER++ +GTG G+++P+LGW+L+GVF +W ++F
Sbjct: 84 TVSTKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWILYF 130
[39][TOP]
>UniRef100_A9NL01 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=A9NL01_PICSI
Length = 146
Score = 58.2 bits (139), Expect = 3e-07
Identities = 23/47 (48%), Positives = 37/47 (78%)
Frame = +1
Query: 181 TLAAHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWF 321
T++ AFALVDER++ +GTG G+++P+LGW+L+GVF +W ++F
Sbjct: 84 TVSTKEAFALVDERLSTEGTGLGLGLSNPLLGWILVGVFTLIWILYF 130
[40][TOP]
>UniRef100_B5A4J5 Photosystem II reaction center W protein n=1 Tax=Gymnochlora
stellata RepID=B5A4J5_GYMST
Length = 147
Score = 57.4 bits (137), Expect = 5e-07
Identities = 37/96 (38%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Frame = +1
Query: 73 PVSRSGARSAVTVVCKATTVRSEVAKKVAMLST---LPATLAAH--PAFALVDERMNGDG 237
P +R AR T V + +E K L AT A H PA ALVD R+NGDG
Sbjct: 41 PATRMMARQGRTAVYAKKGLNTESLKNFQRNMAAVGLSATAALHQLPAEALVDARLNGDG 100
Query: 238 TGRPFGVNDPVLGWVLLGVFGTMWAIWFIGQKDLGD 345
G P G+ND L ++L GVF +WA + K + +
Sbjct: 101 AGIPLGINDSRLFFILAGVFTLVWAAYSTSVKGISN 136
[41][TOP]
>UniRef100_Q9AXN9 PSII subunit PsbW (Fragment) n=2 Tax=Physcomitrella patens
RepID=Q9AXN9_PHYPA
Length = 69
Score = 57.0 bits (136), Expect = 6e-07
Identities = 26/49 (53%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Frame = +1
Query: 178 ATLA-AHPAFALVDERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIWF 321
ATLA AHP FALVDER++ +GTG G+++ L W+L+GV +WA++F
Sbjct: 4 ATLAYAHPVFALVDERLSTEGTGLGLGISNTKLTWILVGVTALIWALYF 52
[42][TOP]
>UniRef100_UPI0001B4E4AC transcriptional regulator, SARP family protein n=1 Tax=Streptomyces
hygroscopicus ATCC 53653 RepID=UPI0001B4E4AC
Length = 1279
Score = 54.7 bits (130), Expect = 3e-06
Identities = 36/95 (37%), Positives = 45/95 (47%)
Frame = -3
Query: 327 ADEPDSPHGAEDAQQDPAQDGVVHAEGAASAVAVHALIDQGEGGVGSQGSRQGAQHGDLL 148
A E + G+ A D + G +A GA A G G G GS GA+ G +
Sbjct: 251 ASEDRTGSGSGPAPGDGSAPGAAYASGAGHAPG------DGTGPGGGYGS--GARPGPGV 302
Query: 147 GHLAADGGGLAHHGHGRASAGAAHGLGSHAGGASG 43
GH+ DG G H GR + GA H GS AGGA+G
Sbjct: 303 GHVPGDGAGAGHVPGGRTAPGAGHAPGSGAGGAAG 337
[43][TOP]
>UniRef100_A2SY30 Photosystem II reaction center W protein n=1 Tax=Mesostigma viride
RepID=A2SY30_MESVI
Length = 128
Score = 53.1 bits (126), Expect = 9e-06
Identities = 35/95 (36%), Positives = 54/95 (56%)
Frame = +1
Query: 34 QALSARAPRVAAKPVSRSGARSAVTVVCKATTVRSEVAKKVAMLSTLPATLAAHPAFALV 213
Q L AR P+ AA+ V AR AV VC+A + VA A +++ A A PA A++
Sbjct: 22 QRLVARKPQAAAR-VPAKCARKAV--VCQAQKNEAAVAVSAAAIASSVAFAA--PAQAII 76
Query: 214 DERMNGDGTGRPFGVNDPVLGWVLLGVFGTMWAIW 318
++ M +G G G+N LG+V+LG F +W+++
Sbjct: 77 EDAMYTEGAGIALGLNSGALGFVMLGAFTLVWSLY 111