[UP]
[1][TOP]
>UniRef100_P12852 Oxygen-evolving enhancer protein 3, chloroplastic n=2
Tax=Chlamydomonas reinhardtii RepID=PSBQ_CHLRE
Length = 199
Score = 243 bits (620), Expect = 5e-63
Identities = 128/128 (100%), Positives = 128/128 (100%)
Frame = +2
Query: 47 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD 226
MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD
Sbjct: 1 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD 60
Query: 227 RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSY 406
RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSY
Sbjct: 61 RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSY 120
Query: 407 WTEAREQL 430
WTEAREQL
Sbjct: 121 WTEAREQL 128
[2][TOP]
>UniRef100_Q1WLV1 Chloroplast oxygen-evolving protein 3 n=1 Tax=Chlamydomonas incerta
RepID=Q1WLV1_CHLIN
Length = 200
Score = 229 bits (583), Expect = 9e-59
Identities = 122/129 (94%), Positives = 125/129 (96%), Gaps = 1/129 (0%)
Frame = +2
Query: 47 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALAL-TPVDLFD 223
MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAA A TPVDLFD
Sbjct: 1 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAAFAAATPVDLFD 60
Query: 224 DRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKS 403
DRS R+RGFDLIYEARDLDLPQNVREGFTQARASL+ETKKRVKESEARIDADLDVFI+KS
Sbjct: 61 DRSARERGFDLIYEARDLDLPQNVREGFTQARASLEETKKRVKESEARIDADLDVFIKKS 120
Query: 404 YWTEAREQL 430
YWTEAREQL
Sbjct: 121 YWTEAREQL 129
[3][TOP]
>UniRef100_Q41643 Oxygen-evolving enhancer protein 3, chloroplastic n=1 Tax=Volvox
carteri RepID=PSBQ_VOLCA
Length = 202
Score = 182 bits (462), Expect = 1e-44
Identities = 99/130 (76%), Positives = 108/130 (83%), Gaps = 2/130 (1%)
Frame = +2
Query: 47 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAV--APKAALALTPVDLF 220
MALA KVA+RPAVASRRG VVVRAS ESRRAVLGGLLAS V A+ A KA A TPVDLF
Sbjct: 1 MALAQKVASRPAVASRRGVVVVRASVESRRAVLGGLLASTVVALTSANKAQAAATPVDLF 60
Query: 221 DDRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQK 400
DDR VR+ GFDLIYEARDLDL Q+ R+G QAR S+D T KRVKESE RIDADL+ FI+K
Sbjct: 61 DDRKVRETGFDLIYEARDLDLRQSARDGLDQARGSIDATIKRVKESETRIDADLEGFIKK 120
Query: 401 SYWTEAREQL 430
+YWTEAREQL
Sbjct: 121 NYWTEAREQL 130
[4][TOP]
>UniRef100_Q7XYI7 Oxygen-evolving enhancer protein 3 n=1 Tax=Bigelowiella natans
RepID=Q7XYI7_BIGNA
Length = 237
Score = 94.7 bits (234), Expect = 3e-18
Identities = 60/130 (46%), Positives = 77/130 (59%)
Frame = +2
Query: 41 AKMALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLF 220
+++ALA TR A S R V A+ RRAVLGGL +A A K+A AL V L
Sbjct: 45 SELALAQ---TRTAGVSCRN--VRTAAQMDRRAVLGGLFGTAAFGAA-KSAQALQDVQLI 98
Query: 221 DDRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQK 400
DDR + GF++IYEARDL L Q+ R+G TQAR L ETKKR +E ++ + F+ K
Sbjct: 99 DDRKAKKNGFEIIYEARDLSLDQDTRDGMTQARTGLQETKKRAIGAEKKL-TEAGSFVDK 157
Query: 401 SYWTEAREQL 430
YW+E R L
Sbjct: 158 KYWSEGRTVL 167
[5][TOP]
>UniRef100_B5A4I8 Photosystem II oxygen evolving enhancer protein 3 n=1
Tax=Gymnochlora stellata RepID=B5A4I8_GYMST
Length = 222
Score = 94.7 bits (234), Expect = 3e-18
Identities = 55/122 (45%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Frame = +2
Query: 68 ATRPAVASRRGAVVVRASGE-SRRAVLGGLLASAVAAVAPKAALALTPVDLFDDRSVRDR 244
ATR + R VRA + RR + GL + AV A A+T DL DDR +
Sbjct: 38 ATRASTGCRN----VRAQAQMDRRTAMTGLFGAM--AVGANKAFAVTSPDLIDDRKAKST 91
Query: 245 GFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSYWTEARE 424
GFD+IYEARDL L Q+ R+GFTQAR+ L ETK RV ++E ++ + F+ K YWTE R
Sbjct: 92 GFDIIYEARDLSLDQDTRDGFTQARSGLKETKTRVMDAEKKL-TEAGAFVDKKYWTEGRN 150
Query: 425 QL 430
L
Sbjct: 151 VL 152
[6][TOP]
>UniRef100_C1EI28 Oxygen-evolving enhancer protein 3, chloroplast n=1 Tax=Micromonas
sp. RCC299 RepID=C1EI28_9CHLO
Length = 205
Score = 77.0 bits (188), Expect = 6e-13
Identities = 48/141 (34%), Positives = 79/141 (56%), Gaps = 10/141 (7%)
Frame = +2
Query: 38 IAKMALASKVATRPAVASRRGA------VVVRASGESRRAVLGGLLASAVAAVAPKAALA 199
+A ++ A+ V T A+ + A V V AS ++R+A LLA+ V A+ A+A
Sbjct: 1 MAAISSAASVFTGKALVQAKTAPKAKASVAVTASADARKAA--SLLAAGVIALQATPAMA 58
Query: 200 LTPVDLFDDRSVRDRGFDLIYEARDLDLPQNVREG----FTQARASLDETKKRVKESEAR 367
L ++L D+R G LIYEARDL++ Q+VR+ F+ + + +T R ES R
Sbjct: 59 LNMIELQDERQTNKNGLQLIYEARDLNITQSVRQDGNSRFSFQKLTTAQTATRASESIKR 118
Query: 368 IDADLDVFIQKSYWTEAREQL 430
++ D+ ++ K+YWT+A +L
Sbjct: 119 LNTDVGEYVGKAYWTQAANEL 139
[7][TOP]
>UniRef100_C1N657 Oxygen-evolving enhancer protein 3, chloroplast n=1 Tax=Micromonas
pusilla CCMP1545 RepID=C1N657_9CHLO
Length = 205
Score = 70.5 bits (171), Expect = 6e-11
Identities = 43/126 (34%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Frame = +2
Query: 65 VATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDDRSVRDR 244
V PAV VV + S++AV L + V A + ALAL ++L D R
Sbjct: 16 VVAAPAVRKAEKVSVVVKADMSKKAV--SLAVAGVVAFSAMPALALNQIELQDKRVTNKE 73
Query: 245 GFDLIYEARDLDLPQNVREG----FTQARASLDETKKRVKESEARIDADLDVFIQKSYWT 412
G LIYEARDL++ ++ R+ F + + ++TK R ES RI+ D+ +++K+YW+
Sbjct: 74 GLQLIYEARDLNIAESTRQDGPSRFAFQKLNSNQTKARATESLNRINKDVPEYVEKAYWS 133
Query: 413 EAREQL 430
+A +L
Sbjct: 134 QAGMEL 139
[8][TOP]
>UniRef100_A4S8C8 PsbQ, PSII-Q, OEE3, photosystem II polypeptide, oxygen evolving
enhancer 3 n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S8C8_OSTLU
Length = 204
Score = 70.1 bits (170), Expect = 7e-11
Identities = 48/131 (36%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Frame = +2
Query: 50 ALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDDR 229
A+A K+ T +V + VV+AS + +AV + + V + P AA A T ++L D R
Sbjct: 14 AIAQKITTSKSVKAN---TVVKAS--ANKAVSLAAVTAVVLSATP-AAFAATGIELTDKR 67
Query: 230 SVRDRGFDLIYEARDLDLPQNVREG----FTQARASLDETKKRVKESEARIDADLDVFIQ 397
G LIYEARDL+L Q R F+ + S ET R ES RI+ D+ ++
Sbjct: 68 VENQTGLQLIYEARDLELDQKPRSDGPSRFSFQKLSQKETAARATESVTRINKDVGEYVG 127
Query: 398 KSYWTEAREQL 430
K YWT+A +L
Sbjct: 128 KKYWTQASNEL 138
[9][TOP]
>UniRef100_UPI0000383963 COG0513: Superfamily II DNA and RNA helicases n=1
Tax=Magnetospirillum magnetotacticum MS-1
RepID=UPI0000383963
Length = 551
Score = 59.3 bits (142), Expect = 1e-07
Identities = 42/105 (40%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Frame = -3
Query: 353 PSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSGHRTGRRGSEQGQPWGPR 174
P R RPG+R+ RG+ G G GRG R+ +RG P G + G R ++ GPR
Sbjct: 434 PPRQPQGRPGQRQGRPGGRGQEGRGEGRGEHRAHEARGGRPGG-QPGHRQDQRQDSRGPR 492
Query: 173 -RRQRSPADRPAPRGATRRRRAQPRHPGGRP---RRGG*QP*RRG 51
QRS RP G R + A+P+ GGRP RRG +P R G
Sbjct: 493 PDGQRSDQRRPERAGEGRPQGARPQ--GGRPNDGRRGDARPARSG 535
[10][TOP]
>UniRef100_B4VB08 Polyketide synthase type I n=1 Tax=Streptomyces sp. Mg1
RepID=B4VB08_9ACTO
Length = 1612
Score = 57.8 bits (138), Expect = 4e-07
Identities = 46/113 (40%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Frame = -3
Query: 383 PGQRRCGPQTPSRA---------SWSRPGKR-EPG*SPRGRSGAGPGRGPRRSGRSRGRE 234
PG RR + P RA + PG+R +P GR+ GPG P R R+ G
Sbjct: 1470 PGVRRPARRRPHRAPRVAVRRRMDEAAPGRRRDPRRRAVGRTRRGPGGVPHRR-RTAGAP 1528
Query: 233 PSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGRPRRG 75
P HR R G+ + +P G RRR R PA R PR R RR R PG RPR+G
Sbjct: 1529 PRPHRAAR-GTRRRRP-GTRRRGR-PAVRDGPRRRPRGRRPDRRPPGARPRQG 1578
[11][TOP]
>UniRef100_UPI0000DC1A1B UPI0000DC1A1B related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0000DC1A1B
Length = 491
Score = 57.0 bits (136), Expect = 6e-07
Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = -3
Query: 422 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 246
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 203 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 262
Query: 245 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 99
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 263 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 318
Query: 98 PGGRPRRGG*QP*RRGPS 45
P R R Q R G S
Sbjct: 319 PVRRRSRSRSQARRSGRS 336
[12][TOP]
>UniRef100_UPI0000DA333B PREDICTED: similar to serine/arginine repetitive matrix 2 n=1
Tax=Rattus norvegicus RepID=UPI0000DA333B
Length = 2707
Score = 57.0 bits (136), Expect = 6e-07
Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = -3
Query: 422 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 246
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 510 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 569
Query: 245 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 99
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 570 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 625
Query: 98 PGGRPRRGG*QP*RRGPS 45
P R R Q R G S
Sbjct: 626 PVRRRSRSRSQARRSGRS 643
[13][TOP]
>UniRef100_UPI0000484FB6 serine/arginine repetitive matrix 2 n=2 Tax=Mus musculus
RepID=UPI0000484FB6
Length = 2703
Score = 57.0 bits (136), Expect = 6e-07
Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = -3
Query: 422 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 246
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 511 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 570
Query: 245 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 99
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 571 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRS 626
Query: 98 PGGRPRRGG*QP*RRGPS 45
P R R Q R G S
Sbjct: 627 PVRRRSRSRSQARRSGRS 644
[14][TOP]
>UniRef100_Q3TR34 Putative uncharacterized protein (Fragment) n=1 Tax=Mus musculus
RepID=Q3TR34_MOUSE
Length = 493
Score = 57.0 bits (136), Expect = 6e-07
Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = -3
Query: 422 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 246
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 205 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 264
Query: 245 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 99
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 265 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRS 320
Query: 98 PGGRPRRGG*QP*RRGPS 45
P R R Q R G S
Sbjct: 321 PVRRRSRSRSQARRSGRS 338
[15][TOP]
>UniRef100_B4V2Y2 Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1
RepID=B4V2Y2_9ACTO
Length = 576
Score = 57.0 bits (136), Expect = 6e-07
Identities = 55/149 (36%), Positives = 62/149 (41%), Gaps = 25/149 (16%)
Frame = -3
Query: 425 AREPQSSRTSG*TRPGQRRCGPQTPSRASWSRPGKREPG*S-----PRGRSGAGP-GRGP 264
A PQ R + RP R P P A RPG+R PG + P+G GP G P
Sbjct: 14 AARPQPGRAA---RPPHRVRLPGLPPPAPPLRPGERHPGHAVHRSPPQGAPRTGPRGTRP 70
Query: 263 RRSGRSRGREPSGHRTGRRGSEQGQPWGPRR----------------RQRSPADRPAPRG 132
R+G R R P GRR +G GPRR R+R RPA R
Sbjct: 71 GRAGAPRRRRPRP-ALGRRAPARGHRPGPRRQALAAALRRADRQSGLRERRLRARPAGRA 129
Query: 131 ATR---RRRAQPRHPGGRPRRGG*QP*RR 54
A R RRR PR G RPR P RR
Sbjct: 130 ARRRDDRRRHHPRPRGRRPRPPDGHPPRR 158
[16][TOP]
>UniRef100_Q8BTI8-3 Isoform 3 of Serine/arginine repetitive matrix protein 2 n=1
Tax=Mus musculus RepID=Q8BTI8-3
Length = 2603
Score = 57.0 bits (136), Expect = 6e-07
Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = -3
Query: 422 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 246
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 511 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 570
Query: 245 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 99
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 571 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 626
Query: 98 PGGRPRRGG*QP*RRGPS 45
P R R Q R G S
Sbjct: 627 PVRRRSRSRSQARRSGRS 644
[17][TOP]
>UniRef100_Q8BTI8 Serine/arginine repetitive matrix protein 2 n=2 Tax=Mus musculus
RepID=SRRM2_MOUSE
Length = 2703
Score = 57.0 bits (136), Expect = 6e-07
Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = -3
Query: 422 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 246
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 511 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 570
Query: 245 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 99
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 571 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 626
Query: 98 PGGRPRRGG*QP*RRGPS 45
P R R Q R G S
Sbjct: 627 PVRRRSRSRSQARRSGRS 644
[18][TOP]
>UniRef100_UPI0001B4F57C transcriptional regulatory protein n=1 Tax=Streptomyces lividans TK24
RepID=UPI0001B4F57C
Length = 1271
Score = 56.2 bits (134), Expect = 1e-06
Identities = 43/123 (34%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Frame = -3
Query: 422 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPR------ 261
R + RT+G TRPG+ P P A ++ +R R R A P R PR
Sbjct: 849 RRTRRGRTAGGTRPGRTAPRPAAPDAARAAQHPRRHRCLPRRPRPAARPRRRPRARTRLR 908
Query: 260 --RSGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGR 87
+ GR R P HR RRG +P P R P P A R R + R PGGR
Sbjct: 909 THQPGRPRPDGPGAHRPHRRGPALRRPVRPARGAGELGAEPLPVRAGRAAR-RHRRPGGR 967
Query: 86 PRR 78
P R
Sbjct: 968 PAR 970
[19][TOP]
>UniRef100_UPI0000F2C98A PREDICTED: similar to CG9434-PA n=1 Tax=Monodelphis domestica
RepID=UPI0000F2C98A
Length = 412
Score = 55.8 bits (133), Expect = 1e-06
Identities = 46/128 (35%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Frame = -3
Query: 428 AAREPQSSRTSG*TRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRS-G 252
A R + R G RP R +P A W RP SPRG + PG R S G
Sbjct: 118 APRGAEQPRPRGAERPRPRGTNRPSPRGAGWPRPRGAGRS-SPRGANWPSPGEAERPSPG 176
Query: 251 RSRGREPSG-HRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGRPRRG 75
+ P G +R RG+EQ +P G R + +RP+PRGA R PR G RG
Sbjct: 177 GAEWPRPRGTNRPSPRGAEQPRPRGAERPRPRGTNRPSPRGAGWPR---PRGAGRSSPRG 233
Query: 74 G*QP*RRG 51
P RG
Sbjct: 234 ANWPSPRG 241
Score = 53.9 bits (128), Expect = 5e-06
Identities = 49/131 (37%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Frame = -3
Query: 422 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRS-GRS 246
R + R G RP R +P A W RP SPRG + P R S G +
Sbjct: 192 RGAEQPRPRGAERPRPRGTNRPSPRGAGWPRPRGAGRS-SPRGANWPSPRGAERPSPGGA 250
Query: 245 RGREPSG-HRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRR--RRAQPRHPGG--RPR 81
P G +R RG+E+ +P G R A RP PRGA R R A PGG RPR
Sbjct: 251 EWPRPRGTNRPSPRGAERPRPRGTNRPSPRGAGRPRPRGARRSSPREANRPSPGGAERPR 310
Query: 80 -RGG*QP*RRG 51
RG +P RG
Sbjct: 311 PRGTNRPSPRG 321
[20][TOP]
>UniRef100_UPI00015FBA1A pseudogene n=1 Tax=Sorangium cellulosum 'So ce 56'
RepID=UPI00015FBA1A
Length = 1848
Score = 55.5 bits (132), Expect = 2e-06
Identities = 47/122 (38%), Positives = 52/122 (42%), Gaps = 6/122 (4%)
Frame = -3
Query: 386 RPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRG----PRRSGRSRGREPSGHR 219
RPG RR P+ R + RP R G +P + GPGR RR R RGR P
Sbjct: 1076 RPGHRRGAPR--DRRALVRPPARAAGAAPGPAARLGPGRPRAARDRRPARGRGRSPL--- 1130
Query: 218 TGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRR-RAQPRHPGGRPRRG-G*QP*RRGPS 45
PRRR RP G RRR R PR GRPRRG G +P RR
Sbjct: 1131 -------------PRRRPLDARPRPPAAGRGRRRGRGAPRSAPGRPRRGPGARPARRADR 1177
Query: 44 LL 39
L
Sbjct: 1178 AL 1179
[21][TOP]
>UniRef100_Q9UQ39 RNA binding protein (Fragment) n=1 Tax=Homo sapiens
RepID=Q9UQ39_HUMAN
Length = 956
Score = 55.5 bits (132), Expect = 2e-06
Identities = 46/123 (37%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Frame = -3
Query: 422 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 246
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 479 RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 538
Query: 245 RGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGR 87
R R P S RT RR S P R R R+PA R R T RRR++ R P R
Sbjct: 539 RSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRR 598
Query: 86 PRR 78
R
Sbjct: 599 RSR 601
[22][TOP]
>UniRef100_Q9UQ35-2 Isoform 2 of Serine/arginine repetitive matrix protein 2 n=1
Tax=Homo sapiens RepID=Q9UQ35-2
Length = 2334
Score = 55.5 bits (132), Expect = 2e-06
Identities = 46/123 (37%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Frame = -3
Query: 422 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 246
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 514 RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 573
Query: 245 RGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGR 87
R R P S RT RR S P R R R+PA R R T RRR++ R P R
Sbjct: 574 RSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRR 633
Query: 86 PRR 78
R
Sbjct: 634 RSR 636
[23][TOP]
>UniRef100_Q9UQ35 Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo sapiens
RepID=SRRM2_HUMAN
Length = 2752
Score = 55.5 bits (132), Expect = 2e-06
Identities = 46/123 (37%), Positives = 56/123 (45%), Gaps = 8/123 (6%)
Frame = -3
Query: 422 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 246
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 514 RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 573
Query: 245 RGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGR 87
R R P S RT RR S P R R R+PA R R T RRR++ R P R
Sbjct: 574 RSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRR 633
Query: 86 PRR 78
R
Sbjct: 634 RSR 636
[24][TOP]
>UniRef100_P39881 Homeobox protein cut-like 1 (Fragment) n=1 Tax=Canis lupus familiaris
RepID=CUX1_CANFA
Length = 975
Score = 55.1 bits (131), Expect = 2e-06
Identities = 41/113 (36%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Frame = -3
Query: 383 PGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSGHRTGRRG 204
PG P+ A+ S+ G E +P R A P +RS R RG P R G G
Sbjct: 787 PGAADAEESAPAAAAKSQGGPAEAAVAPEEREEA-PRPAEKRSRRPRGPGPGPGRRGGGG 845
Query: 203 SEQGQPWGPRRRQRSPADRPAPRG-ATRRRRAQPRHPGGRPRRGG*QP*RRGP 48
G P P R P+ RP R RRRR + RH G RR +P R GP
Sbjct: 846 PAPGAPAAPAAAARGPSRRPGARAKPRRRRRRRRRHARGGGRRYLSRPARGGP 898
[25][TOP]
>UniRef100_UPI00015DEFCE predicted gene, EG381818 n=1 Tax=Mus musculus RepID=UPI00015DEFCE
Length = 446
Score = 54.7 bits (130), Expect = 3e-06
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Frame = -3
Query: 365 GPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSG---HRTGRRGSEQ 195
GPQ+P R ++ G PG P+G GP + P + G +G P G R + G++Q
Sbjct: 100 GPQSPPRPG-TQQGPPPPGPPPQG----GPQQRPPQPGNQQGPPPQGGHQQRPPQPGNQQ 154
Query: 194 GQP--WGPRRRQRSPADR--PAPRGATRRRRAQPRHPGGRPRRGG*Q 66
G P GP++R P ++ P P+G ++R QP + G P +GG Q
Sbjct: 155 GPPPQGGPQQRTPQPGNQQGPPPQGGPQQRPPQPGNQQGPPPQGGPQ 201
[26][TOP]
>UniRef100_UPI000179CC90 UPI000179CC90 related cluster n=1 Tax=Bos taurus
RepID=UPI000179CC90
Length = 2724
Score = 54.7 bits (130), Expect = 3e-06
Identities = 47/127 (37%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Frame = -3
Query: 422 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 246
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 510 RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGRSRSARRGRSHSRSPATRGRS 569
Query: 245 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 99
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 570 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRS 625
Query: 98 PGGRPRR 78
P R R
Sbjct: 626 PVRRRSR 632
[27][TOP]
>UniRef100_UPI00015558E9 PREDICTED: similar to splicing coactivator subunit SRm300, partial
n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015558E9
Length = 2677
Score = 54.3 bits (129), Expect = 4e-06
Identities = 48/143 (33%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Frame = -3
Query: 422 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRPGK-----REPG*SPRGRS--------GA 282
R +S + G +R QRR ++P R WSR R + RGRS G
Sbjct: 395 RRSRSPQRWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGRSRSTARRGRSRSKTPATRGR 454
Query: 281 GPGRGPRRSGRSRGREPSGHR------TGRRGSEQGQPWGPRRRQRSPADRPAPRGATRR 120
R P R GRSR R P+ R T RR + R R R+PA R + + R
Sbjct: 455 SRSRTPARRGRSRSRTPTRRRSRSRTSTRRRSRSRTPTRRGRSRSRTPARRRSRTRSPVR 514
Query: 119 RRAQPRHPGGRPRRGG*QP*RRG 51
RR++ R P R R P RRG
Sbjct: 515 RRSRTRSPVRRGRSRSRTPARRG 537
[28][TOP]
>UniRef100_UPI000184A2B2 Serine/arginine repetitive matrix protein 2 (Serine/arginine-rich
splicing factor-related nuclear matrix protein of 300
kDa) (Ser/Arg- related nuclear matrix protein)
(SR-related nuclear matrix protein of 300 kDa) (Splicing
coactivator subunit SRm300) (30 n=1 Tax=Canis lupus
familiaris RepID=UPI000184A2B2
Length = 2682
Score = 54.3 bits (129), Expect = 4e-06
Identities = 52/146 (35%), Positives = 63/146 (43%), Gaps = 19/146 (13%)
Frame = -3
Query: 425 AREPQSSRTSG*TRPGQRRCGPQTPSRASWSRPG--------------KREPG*SPRGRS 288
AR SRT P +RR +TP+R SR +R SP RS
Sbjct: 522 ARRRSRSRT-----PARRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRS 576
Query: 287 GAGPGRGPRRSGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATR----- 123
G R P R GRSR R P+ RRG + + P RR RS + PA RG +R
Sbjct: 577 GRSRSRTPARRGRSRSRTPA-----RRGRSRSRT--PARRGRSRSRTPARRGRSRSRTPA 629
Query: 122 RRRAQPRHPGGRPRRGG*QP*RRGPS 45
RRR++ R R R P RRG S
Sbjct: 630 RRRSRSRSVVRRGRSHSRTPQRRGRS 655
Score = 53.5 bits (127), Expect = 7e-06
Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
Frame = -3
Query: 425 AREPQSSRTS-----G*TRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGP 264
+R PQ R+ G +R QRR ++P R WSR + G S R G R P
Sbjct: 440 SRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSP 499
Query: 263 RRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQP 105
GRSR R P S RT RR S P R R R+PA R R T RRR++
Sbjct: 500 ATRGRSRSRTPARRARSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRT 559
Query: 104 RHPGGRPRR 78
R P R R
Sbjct: 560 RSPVRRRSR 568
[29][TOP]
>UniRef100_B8A1Z2 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B8A1Z2_MAIZE
Length = 262
Score = 54.3 bits (129), Expect = 4e-06
Identities = 41/105 (39%), Positives = 49/105 (46%), Gaps = 3/105 (2%)
Frame = -3
Query: 380 GQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSGHRTGRRGS 201
G R + P R + R +R+PG PRG GAGPGR R GR R R G + RG+
Sbjct: 94 GPGRGAARPPRRDAQQRRHQRQPGAGPRG--GAGPGRLRPRHGRERPRRGGGRQA--RGA 149
Query: 200 EQGQPWGPRRRQRSPADRPAPRGATRR---RRAQPRHPGGRPRRG 75
G P PRR+ R R G R +R Q R G RRG
Sbjct: 150 RHGAP--PRRQHRVHGQRGRRAGRRRAAALQRVQGRRAGPGARRG 192
[30][TOP]
>UniRef100_UPI0000F2DB84 PREDICTED: similar to splicing coactivator subunit SRm300 n=1
Tax=Monodelphis domestica RepID=UPI0000F2DB84
Length = 2785
Score = 53.9 bits (128), Expect = 5e-06
Identities = 50/135 (37%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Frame = -3
Query: 422 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSR 243
R +S + G +R QRR ++P R WSR R R RS A GR RS +R
Sbjct: 522 RRSRSPQRWGRSRSPQRRGRSRSPQRPGWSR--SRNAQRRGRSRSAARRGRSRSRSPATR 579
Query: 242 GREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRHP 96
GR S R S P R R R+PA R PA RG +R RRR++ R P
Sbjct: 580 GRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRSP 639
Query: 95 GGRPRRGG*QP*RRG 51
R R P RRG
Sbjct: 640 VRRRSRTR-SPARRG 653
[31][TOP]
>UniRef100_UPI0000EB020D UPI0000EB020D related cluster n=1 Tax=Canis lupus familiaris
RepID=UPI0000EB020D
Length = 371
Score = 53.5 bits (127), Expect = 7e-06
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = -3
Query: 386 RPGQRRCGPQTPSRASWSRPGKREPG*SPR--GRSGAGPGRGPRRSGRSRGREPSGHRTG 213
RPG R G SRA+ + P R G +PR G G P R RG P GH
Sbjct: 154 RPGPRPQGHPPWSRAAGTPPSSRAMGATPRRPGPRGHLPLIVQGRRDTPRGPGPRGH-PH 212
Query: 212 RRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGRPRRGG*QP*RRGP 48
R G + P R R RP PRG + RR HP RP G P R GP
Sbjct: 213 RPGPRESPPPPRRAGPRGHPHRPGPRGHSSRRPGPQGHPPHRPGPTGATPGRAGP 267
[32][TOP]
>UniRef100_B5H4G2 Non-ribosomal peptide synthetase n=1 Tax=Streptomyces
pristinaespiralis ATCC 25486 RepID=B5H4G2_STRPR
Length = 3622
Score = 53.5 bits (127), Expect = 7e-06
Identities = 51/143 (35%), Positives = 58/143 (40%), Gaps = 22/143 (15%)
Frame = -3
Query: 386 RPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRG--REPSGHRTG 213
RP + P P R R+P GR R P R+GR RG R P G R G
Sbjct: 2945 RPVRTARQPDVPHRRPRPLAQGRQPRLPGPGRHAGEDPRLPYRTGRDRGGSRGPCGGRPG 3004
Query: 212 RRGSE-QGQPWGPRRRQRS---PADR---------------PAPRGATR-RRRAQPRHPG 93
RRG+ QG+ P R +R P DR P P GA R RRRA R G
Sbjct: 3005 RRGARPQGRHRAPGRLRRPGERPRDRDRHRARHRPRIRPRCPRPAGAARARRRAAARVHG 3064
Query: 92 GRPRRGG*QP*RRGPSLLLG*SG 24
RPRR +P P G G
Sbjct: 3065 ARPRRTAGRPAAADPQRQAGPQG 3087
[33][TOP]
>UniRef100_Q21155 Rnp (Rrm rna binding domain) containing protein 5, confirmed by
transcript evidence n=1 Tax=Caenorhabditis elegans
RepID=Q21155_CAEEL
Length = 289
Score = 53.5 bits (127), Expect = 7e-06
Identities = 42/108 (38%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Frame = -3
Query: 410 SSRTSG*TRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPR-RSGRSRGRE 234
SS +SG + G G ++ S +S R R SPR R P RG R RS RG
Sbjct: 18 SSSSSGSSSSGSSSSGSRSSSSSSSGRSRSR----SPRRRDTRPPARGGRSRSPIRRGSP 73
Query: 233 PSGHRTGRRGSEQGQPWGPRRRQRSPA----DRPAPRGATRRRRAQPR 102
P G R R + P PRRR+ SP+ DR G+ +RRRA PR
Sbjct: 74 PRGARADRDRPMRPSPSPPRRRRPSPSPPRRDRRDRSGSRQRRRASPR 121
[34][TOP]
>UniRef100_Q9EYM5 Competence factor ComEA n=1 Tax=Thermus thermophilus
RepID=Q9EYM5_THETH
Length = 298
Score = 53.1 bits (126), Expect = 9e-06
Identities = 48/139 (34%), Positives = 52/139 (37%), Gaps = 22/139 (15%)
Frame = +1
Query: 46 DGP---RL*GCYPPRRGLPPGCRGCARLRRVAPRGAGRSAGERCRRRGPQ---------- 186
DGP R G P GLPPG APRG G+ R + R PQ
Sbjct: 55 DGPGPGRRGGPLHPPEGLPPGGTQGLPRGAQAPRGPGQEGHRRPQARAPQAPRPGGQGPR 114
Query: 187 ---GCPCSDPRRPVR*PLGSRPRLRPDLRGPRP------GPAPERPRGLHPGSRFPGRDQ 339
G P +P R P G+ R P P P GP PE PR HPG R R
Sbjct: 115 LGGGAPGQNPLGGAR-PGGAPSRPYPHAPSPGPGNPQPFGPTPEAPRPPHPGLRGGLRGH 173
Query: 340 EAREGV*GPHRR*PGRVHP 396
GP PGR HP
Sbjct: 174 PPGRRPLGPRGSGPGRPHP 192