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[1][TOP] >UniRef100_A8I003 Ycf32-related subunit of photosystem II n=1 Tax=Chlamydomonas reinhardtii RepID=A8I003_CHLRE Length = 260 Score = 253 bits (646), Expect = 5e-66 Identities = 136/136 (100%), Positives = 136/136 (100%) Frame = +1 Query: 61 MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA 240 MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA Sbjct: 1 MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA 60 Query: 241 SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA 420 SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA Sbjct: 61 SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA 120 Query: 421 VPAAVGMGAAASLLFA 468 VPAAVGMGAAASLLFA Sbjct: 121 VPAAVGMGAAASLLFA 136 Score = 129 bits (324), Expect = 1e-28 Identities = 66/78 (84%), Positives = 73/78 (93%) Frame = +1 Query: 235 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 414 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 130 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVMGWVGFNIFGSLQAQLNQMDAKNK 189 Query: 415 RAVPAAVGMGAAASLLFA 468 RAVPAAVGMGAAASLLFA Sbjct: 190 RAVPAAVGMGAAASLLFA 207 Score = 95.5 bits (236), Expect = 2e-18 Identities = 47/60 (78%), Positives = 55/60 (91%) Frame = +1 Query: 235 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 414 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL+QMDAKNK Sbjct: 201 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLSQMDAKNK 260 [2][TOP] >UniRef100_A8JKA1 Ycf32-related polyprotein of photosystem II (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8JKA1_CHLRE Length = 354 Score = 168 bits (425), Expect = 2e-40 Identities = 88/88 (100%), Positives = 88/88 (100%) Frame = +1 Query: 205 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 384 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA Sbjct: 1 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 60 Query: 385 QLNQMDAKNKRAVPAAVGMGAAASLLFA 468 QLNQMDAKNKRAVPAAVGMGAAASLLFA Sbjct: 61 QLNQMDAKNKRAVPAAVGMGAAASLLFA 88 Score = 129 bits (324), Expect = 1e-28 Identities = 66/78 (84%), Positives = 73/78 (93%) Frame = +1 Query: 235 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 414 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 82 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 141 Query: 415 RAVPAAVGMGAAASLLFA 468 RAVPAAVGMGAAASLLFA Sbjct: 142 RAVPAAVGMGAAASLLFA 159 Score = 129 bits (324), Expect = 1e-28 Identities = 66/78 (84%), Positives = 73/78 (93%) Frame = +1 Query: 235 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 414 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 153 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 212 Query: 415 RAVPAAVGMGAAASLLFA 468 RAVPAAVGMGAAASLLFA Sbjct: 213 RAVPAAVGMGAAASLLFA 230 Score = 129 bits (324), Expect = 1e-28 Identities = 66/78 (84%), Positives = 73/78 (93%) Frame = +1 Query: 235 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 414 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 224 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 283 Query: 415 RAVPAAVGMGAAASLLFA 468 RAVPAAVGMGAAASLLFA Sbjct: 284 RAVPAAVGMGAAASLLFA 301 Score = 95.1 bits (235), Expect = 2e-18 Identities = 47/60 (78%), Positives = 54/60 (90%) Frame = +1 Query: 235 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 414 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL QMDAKNK Sbjct: 295 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLRQMDAKNK 354 [3][TOP] >UniRef100_C1MZ88 Photosystem II PsbY protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MZ88_9CHLO Length = 279 Score = 61.6 bits (148), Expect = 3e-08 Identities = 45/144 (31%), Positives = 67/144 (46%), Gaps = 4/144 (2%) Frame = +1 Query: 34 ALCLPRLVKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGT 213 ++ +P L + R+S + R LPVR A V A A + ++G Sbjct: 3 SIAMPVLSAAVSARVSVRAKVSTRGLRAVGVKPLPVRPAAVRVSASAAAESQTDDLQLGQ 62 Query: 214 VATLSSVAASWMMAGNAQAATE-LASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQL 390 A L+ A + A AA+E L+ +A D+RA I +L P +GWV +NI Q Sbjct: 63 TAALTLAGALALGTEQASAASESLSQVAGFDSRALIFLGILGPAIGWVLYNILTPGLNQF 122 Query: 391 NQMDAKN---KRAVPAAVGMGAAA 453 N M KN K+ +P +G+ AAA Sbjct: 123 NSMQEKNARGKKGIPLGLGLSAAA 146 [4][TOP] >UniRef100_A9U315 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U315_PHYPA Length = 137 Score = 58.5 bits (140), Expect = 2e-07 Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 1/89 (1%) Frame = +1 Query: 205 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 384 V V T ++ A+ + +A A+ ++ +LA DNR L L+P +GWV FNI LQ Sbjct: 2 VNLVCTTGAMFAAMATSESAMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNI---LQP 58 Query: 385 QLNQMD-AKNKRAVPAAVGMGAAASLLFA 468 LNQ+D + +A+ A G+GAAA+L+ A Sbjct: 59 ALNQVDKMRGAKALVAGAGLGAAATLMAA 87 [5][TOP] >UniRef100_C1E7Y4 Photosystem II PsbY protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E7Y4_9CHLO Length = 191 Score = 57.0 bits (136), Expect = 6e-07 Identities = 38/77 (49%), Positives = 42/77 (54%), Gaps = 2/77 (2%) Frame = +1 Query: 229 SVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQM--D 402 S AA M A AATE LA D R I VPVLGWVG+NI G QL +M D Sbjct: 56 SAAALMGMPEAADAATEAMQLADLDARIAIFGAF-VPVLGWVGYNILGPGLKQLEKMQQD 114 Query: 403 AKNKRAVPAAVGMGAAA 453 A K+ V A VG+ AAA Sbjct: 115 AAKKKGVAAGVGLSAAA 131 [6][TOP] >UniRef100_Q00Y99 Manganese-binding protein PsbY, photosystem II-associated-s (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y99_OSTTA Length = 265 Score = 56.6 bits (135), Expect = 8e-07 Identities = 49/137 (35%), Positives = 60/137 (43%), Gaps = 2/137 (1%) Frame = +1 Query: 55 VKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSV 234 V + ALR S A R R AK R A+ S V A+ E S+ Sbjct: 5 VNVPALRASRAAPLAKRE--RRAK-----RTAIASKVATKVATIESDEIVTRGQTAAMSL 57 Query: 235 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN- 411 AA+ + A A AA E+ LA D R I + PVLGWV +NI G Q M KN Sbjct: 58 AATMLFADQAHAAQEVGDLAGIDGRIAIFF-VFAPVLGWVAYNILGPGLRQFEDMQKKNA 116 Query: 412 -KRAVPAAVGMGAAASL 459 + V A G+ AAA L Sbjct: 117 KSKGVLAGAGLSAAALL 133 [7][TOP] >UniRef100_B6SUJ7 Photosystem II core complex proteins psbY n=1 Tax=Zea mays RepID=B6SUJ7_MAIZE Length = 196 Score = 56.2 bits (134), Expect = 1e-06 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 2/137 (1%) Frame = +1 Query: 52 LVKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRS--VVVRAQASEEQLGFKVGTVATL 225 + +A + + P RS+ S + +R R+ V A S G +A+ Sbjct: 1 MATIATMALLKPARIVARSAPPSTSGSVSLRVPARAKKAAVSASVSSALAGAFFSALASS 60 Query: 226 SSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDA 405 + A+ +A A AA A SDNR +L ++ P +GWV +NI LQ LNQ++ Sbjct: 61 DAALAAQRVADVAAAAD-----AGSDNRGQLLLFVVAPAIGWVLYNI---LQPALNQLNR 112 Query: 406 KNKRAVPAAVGMGAAAS 456 +AV A +G+GAAA+ Sbjct: 113 MRSQAVVAGLGLGAAAA 129 [8][TOP] >UniRef100_A9SPH7 PsbY photosystem II polypeptide n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPH7_PHYPA Length = 368 Score = 55.5 bits (132), Expect = 2e-06 Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 11/100 (11%) Frame = +1 Query: 202 KVGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQ 381 K G + L AS +A +A AA E+A+LA SD+R I+ LL+P +GWV FNI Sbjct: 205 KRGVIGALGLGTASLFLAPHADAAQEIATLADSDSRGLIIIGLLLPAVGWVLFNILKPAL 264 Query: 382 AQLNQMDAKNKRAVP-----------AAVGMGAAASLLFA 468 Q+N + N P A G+ AAA L A Sbjct: 265 NQINNIVEGNDTGAPVKRGKKFGGMIGATGISAAAMSLLA 304 [9][TOP] >UniRef100_A4S5C8 Possible psbY, PSII-Y, photosystem II polypeptide n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S5C8_OSTLU Length = 416 Score = 54.7 bits (130), Expect = 3e-06 Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 5/136 (3%) Frame = +1 Query: 70 LRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWM 249 + + A A R + R+A+ + RA S VV + + + + G A +++ AAS Sbjct: 9 ITLPARAPARARRTARTAQSARVIARARTSAVVEDEFATDDDVVRRGQTAAMAT-AASMF 67 Query: 250 MAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN-----K 414 A A AA EL A D R I + PVLGWV +NI QL M A N K Sbjct: 68 FADRADAAQELMQTAL-DGRPLIFLAVFGPVLGWVAYNILSPGLRQLENMQAVNAKSSKK 126 Query: 415 RAVPAAVGMGAAASLL 462 RA A G A++L+ Sbjct: 127 RAAGALAGGLTASALM 142 [10][TOP] >UniRef100_B6SQV2 Photosystem II core complex proteins psbY n=1 Tax=Zea mays RepID=B6SQV2_MAIZE Length = 191 Score = 53.1 bits (126), Expect = 9e-06 Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 2/137 (1%) Frame = +1 Query: 52 LVKMAALRMSAPTSAALRSSVRSAKPVLPVR--RAVRSVVVRAQASEEQLGFKVGTVATL 225 + MA L+ +A +A S S L VR +A + + AS G A L Sbjct: 4 IATMALLKPAAKAAARSAPSTSSGSVSLRVRTGQAAKKAALSVSASSTLAG------AFL 57 Query: 226 SSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDA 405 +++A+S +A A A+ A D+R +L ++ P +GWV +NI QLN+M Sbjct: 58 AALASS----PDAALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRM-- 111 Query: 406 KNKRAVPAAVGMGAAAS 456 ++ +AV A +G+GAAA+ Sbjct: 112 RSSQAVAAGLGLGAAAA 128