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[1][TOP] >UniRef100_A8I003 Ycf32-related subunit of photosystem II n=1 Tax=Chlamydomonas reinhardtii RepID=A8I003_CHLRE Length = 260 Score = 243 bits (620), Expect = 5e-63 Identities = 130/130 (100%), Positives = 130/130 (100%) Frame = +2 Query: 62 MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA 241 MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA Sbjct: 1 MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA 60 Query: 242 SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA 421 SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA Sbjct: 61 SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA 120 Query: 422 VPAAVGMGAA 451 VPAAVGMGAA Sbjct: 121 VPAAVGMGAA 130 Score = 119 bits (298), Expect = 1e-25 Identities = 60/72 (83%), Positives = 67/72 (93%) Frame = +2 Query: 236 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 415 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 130 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVMGWVGFNIFGSLQAQLNQMDAKNK 189 Query: 416 RAVPAAVGMGAA 451 RAVPAAVGMGAA Sbjct: 190 RAVPAAVGMGAA 201 Score = 95.5 bits (236), Expect = 2e-18 Identities = 47/60 (78%), Positives = 55/60 (91%) Frame = +2 Query: 236 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 415 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL+QMDAKNK Sbjct: 201 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLSQMDAKNK 260 [2][TOP] >UniRef100_A8JKA1 Ycf32-related polyprotein of photosystem II (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8JKA1_CHLRE Length = 354 Score = 158 bits (399), Expect = 2e-37 Identities = 82/82 (100%), Positives = 82/82 (100%) Frame = +2 Query: 206 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 385 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA Sbjct: 1 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 60 Query: 386 QLNQMDAKNKRAVPAAVGMGAA 451 QLNQMDAKNKRAVPAAVGMGAA Sbjct: 61 QLNQMDAKNKRAVPAAVGMGAA 82 Score = 119 bits (298), Expect = 1e-25 Identities = 60/72 (83%), Positives = 67/72 (93%) Frame = +2 Query: 236 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 415 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 82 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 141 Query: 416 RAVPAAVGMGAA 451 RAVPAAVGMGAA Sbjct: 142 RAVPAAVGMGAA 153 Score = 119 bits (298), Expect = 1e-25 Identities = 60/72 (83%), Positives = 67/72 (93%) Frame = +2 Query: 236 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 415 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 153 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 212 Query: 416 RAVPAAVGMGAA 451 RAVPAAVGMGAA Sbjct: 213 RAVPAAVGMGAA 224 Score = 119 bits (298), Expect = 1e-25 Identities = 60/72 (83%), Positives = 67/72 (93%) Frame = +2 Query: 236 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 415 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 224 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 283 Query: 416 RAVPAAVGMGAA 451 RAVPAAVGMGAA Sbjct: 284 RAVPAAVGMGAA 295 Score = 95.1 bits (235), Expect = 2e-18 Identities = 47/60 (78%), Positives = 54/60 (90%) Frame = +2 Query: 236 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 415 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL QMDAKNK Sbjct: 295 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLRQMDAKNK 354 [3][TOP] >UniRef100_C1MZ88 Photosystem II PsbY protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MZ88_9CHLO Length = 279 Score = 60.1 bits (144), Expect = 8e-08 Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 4/143 (2%) Frame = +2 Query: 35 ALCLPRLVKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGT 214 ++ +P L + R+S + R LPVR A V A A + ++G Sbjct: 3 SIAMPVLSAAVSARVSVRAKVSTRGLRAVGVKPLPVRPAAVRVSASAAAESQTDDLQLGQ 62 Query: 215 VATLSSVAASWMMAGNAQAATE-LASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQL 391 A L+ A + A AA+E L+ +A D+RA I +L P +GWV +NI Q Sbjct: 63 TAALTLAGALALGTEQASAASESLSQVAGFDSRALIFLGILGPAIGWVLYNILTPGLNQF 122 Query: 392 NQMDAKN---KRAVPAAVGMGAA 451 N M KN K+ +P +G+ AA Sbjct: 123 NSMQEKNARGKKGIPLGLGLSAA 145 [4][TOP] >UniRef100_C1E7Y4 Photosystem II PsbY protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E7Y4_9CHLO Length = 191 Score = 55.5 bits (132), Expect = 2e-06 Identities = 37/76 (48%), Positives = 41/76 (53%), Gaps = 2/76 (2%) Frame = +2 Query: 230 SVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQM--D 403 S AA M A AATE LA D R I VPVLGWVG+NI G QL +M D Sbjct: 56 SAAALMGMPEAADAATEAMQLADLDARIAIFGAF-VPVLGWVGYNILGPGLKQLEKMQQD 114 Query: 404 AKNKRAVPAAVGMGAA 451 A K+ V A VG+ AA Sbjct: 115 AAKKKGVAAGVGLSAA 130 [5][TOP] >UniRef100_Q00Y99 Manganese-binding protein PsbY, photosystem II-associated-s (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y99_OSTTA Length = 265 Score = 54.3 bits (129), Expect = 4e-06 Identities = 47/134 (35%), Positives = 58/134 (43%), Gaps = 2/134 (1%) Frame = +2 Query: 56 VKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSV 235 V + ALR S A R R AK R A+ S V A+ E S+ Sbjct: 5 VNVPALRASRAAPLAKRE--RRAK-----RTAIASKVATKVATIESDEIVTRGQTAAMSL 57 Query: 236 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN- 412 AA+ + A A AA E+ LA D R I + PVLGWV +NI G Q M KN Sbjct: 58 AATMLFADQAHAAQEVGDLAGIDGRIAIFF-VFAPVLGWVAYNILGPGLRQFEDMQKKNA 116 Query: 413 -KRAVPAAVGMGAA 451 + V A G+ AA Sbjct: 117 KSKGVLAGAGLSAA 130 [6][TOP] >UniRef100_B6SUJ7 Photosystem II core complex proteins psbY n=1 Tax=Zea mays RepID=B6SUJ7_MAIZE Length = 196 Score = 54.3 bits (129), Expect = 4e-06 Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 2/135 (1%) Frame = +2 Query: 53 LVKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRS--VVVRAQASEEQLGFKVGTVATL 226 + +A + + P RS+ S + +R R+ V A S G +A+ Sbjct: 1 MATIATMALLKPARIVARSAPPSTSGSVSLRVPARAKKAAVSASVSSALAGAFFSALASS 60 Query: 227 SSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDA 406 + A+ +A A AA A SDNR +L ++ P +GWV +NI LQ LNQ++ Sbjct: 61 DAALAAQRVADVAAAAD-----AGSDNRGQLLLFVVAPAIGWVLYNI---LQPALNQLNR 112 Query: 407 KNKRAVPAAVGMGAA 451 +AV A +G+GAA Sbjct: 113 MRSQAVVAGLGLGAA 127 [7][TOP] >UniRef100_A9SPH7 PsbY photosystem II polypeptide n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPH7_PHYPA Length = 368 Score = 53.9 bits (128), Expect = 5e-06 Identities = 31/79 (39%), Positives = 42/79 (53%) Frame = +2 Query: 203 KVGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQ 382 K G + L AS +A +A AA E+A+LA SD+R I+ LL+P +GWV FNI Sbjct: 205 KRGVIGALGLGTASLFLAPHADAAQEIATLADSDSRGLIIIGLLLPAVGWVLFNILKPAL 264 Query: 383 AQLNQMDAKNKRAVPAAVG 439 Q+N + N P G Sbjct: 265 NQINNIVEGNDTGAPVKRG 283 [8][TOP] >UniRef100_A9U315 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U315_PHYPA Length = 137 Score = 53.5 bits (127), Expect = 7e-06 Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 1/83 (1%) Frame = +2 Query: 206 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 385 V V T ++ A+ + +A A+ ++ +LA DNR L L+P +GWV FNI LQ Sbjct: 2 VNLVCTTGAMFAAMATSESAMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNI---LQP 58 Query: 386 QLNQMD-AKNKRAVPAAVGMGAA 451 LNQ+D + +A+ A G+GAA Sbjct: 59 ALNQVDKMRGAKALVAGAGLGAA 81