AV644932 ( HCL095f09_r )

[UP]


[1][TOP]
>UniRef100_A8I003 Ycf32-related subunit of photosystem II n=1 Tax=Chlamydomonas
           reinhardtii RepID=A8I003_CHLRE
          Length = 260

 Score =  243 bits (620), Expect = 5e-63
 Identities = 130/130 (100%), Positives = 130/130 (100%)
 Frame = +2

Query: 62  MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA 241
           MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA
Sbjct: 1   MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA 60

Query: 242 SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA 421
           SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA
Sbjct: 61  SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA 120

Query: 422 VPAAVGMGAA 451
           VPAAVGMGAA
Sbjct: 121 VPAAVGMGAA 130

 Score =  119 bits (298), Expect = 1e-25
 Identities = 60/72 (83%), Positives = 67/72 (93%)
 Frame = +2

Query: 236 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 415
           AAS + A +A+A+TE+A+LAASDNR  ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 130 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVMGWVGFNIFGSLQAQLNQMDAKNK 189

Query: 416 RAVPAAVGMGAA 451
           RAVPAAVGMGAA
Sbjct: 190 RAVPAAVGMGAA 201

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 47/60 (78%), Positives = 55/60 (91%)
 Frame = +2

Query: 236 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 415
           AAS + A +A+A+TE+A+LAASDNR  ILATLLVPV+GWVGFNIFGSLQAQL+QMDAKNK
Sbjct: 201 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLSQMDAKNK 260

[2][TOP]
>UniRef100_A8JKA1 Ycf32-related polyprotein of photosystem II (Fragment) n=1
           Tax=Chlamydomonas reinhardtii RepID=A8JKA1_CHLRE
          Length = 354

 Score =  158 bits (399), Expect = 2e-37
 Identities = 82/82 (100%), Positives = 82/82 (100%)
 Frame = +2

Query: 206 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 385
           VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA
Sbjct: 1   VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 60

Query: 386 QLNQMDAKNKRAVPAAVGMGAA 451
           QLNQMDAKNKRAVPAAVGMGAA
Sbjct: 61  QLNQMDAKNKRAVPAAVGMGAA 82

 Score =  119 bits (298), Expect = 1e-25
 Identities = 60/72 (83%), Positives = 67/72 (93%)
 Frame = +2

Query: 236 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 415
           AAS + A +A+A+TE+A+LAASDNR  ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 82  AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 141

Query: 416 RAVPAAVGMGAA 451
           RAVPAAVGMGAA
Sbjct: 142 RAVPAAVGMGAA 153

 Score =  119 bits (298), Expect = 1e-25
 Identities = 60/72 (83%), Positives = 67/72 (93%)
 Frame = +2

Query: 236 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 415
           AAS + A +A+A+TE+A+LAASDNR  ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 153 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 212

Query: 416 RAVPAAVGMGAA 451
           RAVPAAVGMGAA
Sbjct: 213 RAVPAAVGMGAA 224

 Score =  119 bits (298), Expect = 1e-25
 Identities = 60/72 (83%), Positives = 67/72 (93%)
 Frame = +2

Query: 236 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 415
           AAS + A +A+A+TE+A+LAASDNR  ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 224 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 283

Query: 416 RAVPAAVGMGAA 451
           RAVPAAVGMGAA
Sbjct: 284 RAVPAAVGMGAA 295

 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 47/60 (78%), Positives = 54/60 (90%)
 Frame = +2

Query: 236 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 415
           AAS + A +A+A+TE+A+LAASDNR  ILATLLVPV+GWVGFNIFGSLQAQL QMDAKNK
Sbjct: 295 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLRQMDAKNK 354

[3][TOP]
>UniRef100_C1MZ88 Photosystem II PsbY protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1MZ88_9CHLO
          Length = 279

 Score = 60.1 bits (144), Expect = 8e-08
 Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 4/143 (2%)
 Frame = +2

Query: 35  ALCLPRLVKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGT 214
           ++ +P L    + R+S     + R         LPVR A   V   A A  +    ++G 
Sbjct: 3   SIAMPVLSAAVSARVSVRAKVSTRGLRAVGVKPLPVRPAAVRVSASAAAESQTDDLQLGQ 62

Query: 215 VATLSSVAASWMMAGNAQAATE-LASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQL 391
            A L+   A  +    A AA+E L+ +A  D+RA I   +L P +GWV +NI      Q 
Sbjct: 63  TAALTLAGALALGTEQASAASESLSQVAGFDSRALIFLGILGPAIGWVLYNILTPGLNQF 122

Query: 392 NQMDAKN---KRAVPAAVGMGAA 451
           N M  KN   K+ +P  +G+ AA
Sbjct: 123 NSMQEKNARGKKGIPLGLGLSAA 145

[4][TOP]
>UniRef100_C1E7Y4 Photosystem II PsbY protein n=1 Tax=Micromonas sp. RCC299
           RepID=C1E7Y4_9CHLO
          Length = 191

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 37/76 (48%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
 Frame = +2

Query: 230 SVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQM--D 403
           S AA   M   A AATE   LA  D R  I     VPVLGWVG+NI G    QL +M  D
Sbjct: 56  SAAALMGMPEAADAATEAMQLADLDARIAIFGAF-VPVLGWVGYNILGPGLKQLEKMQQD 114

Query: 404 AKNKRAVPAAVGMGAA 451
           A  K+ V A VG+ AA
Sbjct: 115 AAKKKGVAAGVGLSAA 130

[5][TOP]
>UniRef100_Q00Y99 Manganese-binding protein PsbY, photosystem II-associated-s (ISS)
           n=1 Tax=Ostreococcus tauri RepID=Q00Y99_OSTTA
          Length = 265

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 47/134 (35%), Positives = 58/134 (43%), Gaps = 2/134 (1%)
 Frame = +2

Query: 56  VKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSV 235
           V + ALR S     A R   R AK     R A+ S V    A+ E             S+
Sbjct: 5   VNVPALRASRAAPLAKRE--RRAK-----RTAIASKVATKVATIESDEIVTRGQTAAMSL 57

Query: 236 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN- 412
           AA+ + A  A AA E+  LA  D R  I   +  PVLGWV +NI G    Q   M  KN 
Sbjct: 58  AATMLFADQAHAAQEVGDLAGIDGRIAIFF-VFAPVLGWVAYNILGPGLRQFEDMQKKNA 116

Query: 413 -KRAVPAAVGMGAA 451
             + V A  G+ AA
Sbjct: 117 KSKGVLAGAGLSAA 130

[6][TOP]
>UniRef100_B6SUJ7 Photosystem II core complex proteins psbY n=1 Tax=Zea mays
           RepID=B6SUJ7_MAIZE
          Length = 196

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 41/135 (30%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
 Frame = +2

Query: 53  LVKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRS--VVVRAQASEEQLGFKVGTVATL 226
           +  +A + +  P     RS+  S    + +R   R+    V A  S    G     +A+ 
Sbjct: 1   MATIATMALLKPARIVARSAPPSTSGSVSLRVPARAKKAAVSASVSSALAGAFFSALASS 60

Query: 227 SSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDA 406
            +  A+  +A  A AA      A SDNR  +L  ++ P +GWV +NI   LQ  LNQ++ 
Sbjct: 61  DAALAAQRVADVAAAAD-----AGSDNRGQLLLFVVAPAIGWVLYNI---LQPALNQLNR 112

Query: 407 KNKRAVPAAVGMGAA 451
              +AV A +G+GAA
Sbjct: 113 MRSQAVVAGLGLGAA 127

[7][TOP]
>UniRef100_A9SPH7 PsbY photosystem II polypeptide n=1 Tax=Physcomitrella patens
           subsp. patens RepID=A9SPH7_PHYPA
          Length = 368

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 31/79 (39%), Positives = 42/79 (53%)
 Frame = +2

Query: 203 KVGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQ 382
           K G +  L    AS  +A +A AA E+A+LA SD+R  I+  LL+P +GWV FNI     
Sbjct: 205 KRGVIGALGLGTASLFLAPHADAAQEIATLADSDSRGLIIIGLLLPAVGWVLFNILKPAL 264

Query: 383 AQLNQMDAKNKRAVPAAVG 439
            Q+N +   N    P   G
Sbjct: 265 NQINNIVEGNDTGAPVKRG 283

[8][TOP]
>UniRef100_A9U315 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
           patens RepID=A9U315_PHYPA
          Length = 137

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 32/83 (38%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
 Frame = +2

Query: 206 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 385
           V  V T  ++ A+   + +A A+ ++ +LA  DNR   L   L+P +GWV FNI   LQ 
Sbjct: 2   VNLVCTTGAMFAAMATSESAMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNI---LQP 58

Query: 386 QLNQMD-AKNKRAVPAAVGMGAA 451
            LNQ+D  +  +A+ A  G+GAA
Sbjct: 59  ALNQVDKMRGAKALVAGAGLGAA 81