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[1][TOP] >UniRef100_A8J3A1 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8J3A1_CHLRE Length = 2212 Score = 177 bits (448), Expect = 5e-43 Identities = 93/114 (81%), Positives = 100/114 (87%) Frame = +1 Query: 1 DEGGVRRTVVGLAAQGGSSSSDKAASELKPNSLAVLRIGPLGQECVGGCALVGVLDVPRA 180 +EGGVRRTVVGLAAQ GS+SSDKA +ELKPNSLAVL IGPLGQECVGGC+LVGVLDVPRA Sbjct: 493 NEGGVRRTVVGLAAQVGSTSSDKATAELKPNSLAVLSIGPLGQECVGGCSLVGVLDVPRA 552 Query: 181 SPSDMQLPEQVPISRLFDPRAPHSLSLGPLRLNVQPPNSLGVAVSVAAAAAAGG 342 SPSDMQLPEQVPISRLFDPRAPHSLSLGPLRLN + V + +AAA AA G Sbjct: 553 SPSDMQLPEQVPISRLFDPRAPHSLSLGPLRLNQE------VVLRLAAAVAAYG 600 [2][TOP] >UniRef100_A8JAD6 Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8JAD6_CHLRE Length = 3177 Score = 106 bits (264), Expect = 1e-21 Identities = 69/145 (47%), Positives = 87/145 (60%), Gaps = 2/145 (1%) Frame = +1 Query: 88 PNSLAVLRIGPLGQECVGGCALVGVLDVPRASPSDMQL--PEQVPISRLFDPRAPHSLSL 261 P LA GP+G EC+GGC++ VLDVPR S S + L PEQ+ +S+L+DPRAP + S Sbjct: 2110 PAGLASHTFGPMGNECLGGCSVSFVLDVPRLSASALPLPPPEQLKVSKLYDPRAPATYS- 2168 Query: 262 GPLRLNVQPPNSLGVAVSVAAAAAAGGDVGGGGGGKKAAVVVRDVGGEQLVTIEPGAQAE 441 L L V P N L AV+VA AAA G G + D G+QL++IEPG++A Sbjct: 2169 QQLSLKVLPENEL--AVTVAVAAAPGVTAGS----------ITDADGKQLLSIEPGSEAT 2216 Query: 442 ITVAVIDPNTTITTAGASVTVYGVD 516 +TV V AGASVTVYGVD Sbjct: 2217 VTVTV-----GSVGAGASVTVYGVD 2236 [3][TOP] >UniRef100_A8IZ76 Predicted protein n=1 Tax=Chlamydomonas reinhardtii RepID=A8IZ76_CHLRE Length = 2065 Score = 101 bits (252), Expect = 3e-20 Identities = 67/157 (42%), Positives = 87/157 (55%), Gaps = 3/157 (1%) Frame = +1 Query: 55 SSSDKAASELKPNSLAVLRIGPLGQE-CVGGCALVGVLDVPRASPSDMQL--PEQVPISR 225 ++ KA L ++A + +GPL + C GGCA+ VL VPR PSDM L P+ VP+S Sbjct: 1009 ATQSKAIDTLPAGAMADVELGPLSYDTCAGGCAVTAVLHVPRLGPSDMPLPPPDAVPVSV 1068 Query: 226 LFDPRAPHSLSLGPLRLNVQPPNSLGVAVSVAAAAAAGGDVGGGGGGKKAAVVVRDVGGE 405 + DPRAP + S LR+ V N L V V+V A G+ GGG V D GGE Sbjct: 1069 VCDPRAPLTYS-SKLRIAVADDNGLEVVVAVGPVA---GEAAGGGR-------VVDAGGE 1117 Query: 406 QLVTIEPGAQAEITVAVIDPNTTITTAGASVTVYGVD 516 +L+ IEPG +AE++V V G VTVYGVD Sbjct: 1118 ELLAIEPGQKAEVSVRVSGAG-----PGVEVTVYGVD 1149 [4][TOP] >UniRef100_C4RJ54 Polyketide synthase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RJ54_9ACTO Length = 913 Score = 63.2 bits (152), Expect = 1e-08 Identities = 64/178 (35%), Positives = 73/178 (41%), Gaps = 32/178 (17%) Frame = +3 Query: 27 GGPGGT-RRQQ**RQGRLRAQAQLAGGAAHRASG-------------PGVRGRMRAGGGA 164 GGPG + RR + R GR R GGA HR G PGVRGR G Sbjct: 457 GGPGRSGRRGRRTRAGRARPH----GGAVHRPGGAAGPDGRRPGGRVPGVRGRPGRGVRP 512 Query: 165 GRAACQPVRHAAAGTGAH--------QSAVRPARPPQPQPGPVAAQRAAAQLPGRRRQRG 320 R A +PV AG GA + AV PAR + + GPV A+R A + P R + Sbjct: 513 DRRARRPVGARPAGGGARHPRRCPAGRHAVHPARAVRGRGGPVPARRVAGRPPRRAHRPL 572 Query: 321 SGGGGRWGC---RWWRRREEGGGGREGRGRRAAGDD*AGRPGGDHG-------RRHRP 464 GR C RRRE G RAAG GR G G R HRP Sbjct: 573 GRRAGRRACGRGAVARRREHAGRRPRPADGRAAGRRRHGRGAGVRGGGARVADRPHRP 630 [5][TOP] >UniRef100_Q2IMJ3 LigA n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IMJ3_ANADE Length = 808 Score = 62.8 bits (151), Expect = 1e-08 Identities = 64/158 (40%), Positives = 69/158 (43%), Gaps = 6/158 (3%) Frame = +3 Query: 6 GRRAAHRGGPGGTRRQQ**RQGRLRAQAQLAGGAAHRASGPGVRGRMRAGGGAGRAACQP 185 G RA H G G RR+ GR RA G RA RGR RAG G GR A Sbjct: 306 GARAGHGRGGGRPRRRARRAGGRARA-----GRGRRRARAGAGRGRARAGAGRGRRA--- 357 Query: 186 VRHAAAGTGAHQSAVRPARPPQPQPGPVAAQRAAAQLPGRRRQRGSGGGG-----RWGCR 350 RH G GA + R AR + G A+RA PG RR RG+ G G G R Sbjct: 358 ARH---GRGARRRGGRRARRAGGRAGG-RARRAGRAGPGARRGRGARGRGPARRRGGGRR 413 Query: 351 WWRRREEGGGGREGRGRRAAGDD*AG-RPGGDHGRRHR 461 RR G G R GR RRA A R GG GR R Sbjct: 414 APRRGGRGRGARPGRRRRARRRARADRRAGGRAGRGGR 451 Score = 61.6 bits (148), Expect = 3e-08 Identities = 65/173 (37%), Positives = 72/173 (41%), Gaps = 22/173 (12%) Frame = +3 Query: 3 RGRRAAHRGGPGGTRRQQ**R-QGRLRAQAQLAGGAAHRASGPGVR-GRMRAGGGAGRAA 176 R R +G G RR R +GR R A+L GG A RA G R GR RA G AGR Sbjct: 477 RRARVPGQGRRAGRRRPAHRRPRGRARRGARLGGGHARRAGAGGERAGRGRAEGRAGRRR 536 Query: 177 CQPVRHA-----------------AAGTGAHQSAVRPARP---PQPQPGPVAAQRAAAQL 296 +P R A G G A R R P Q G VA + AA Sbjct: 537 ARPARARGGDRAPGRRGRAGARPPARGRGEAARAARARRRGGRPAAQGGRVAPRDGAAAH 596 Query: 297 PGRRRQRGSGGGGRWGCRWWRRREEGGGGREGRGRRAAGDD*AGRPGGDHGRR 455 PGRR + G G R RR G R RGR+AAG A R G GRR Sbjct: 597 PGRRGRLAVGAGRR------RRAGARRGARRRRGRQAAGLRRAPRVGA--GRR 641 Score = 58.2 bits (139), Expect = 3e-07 Identities = 57/160 (35%), Positives = 65/160 (40%), Gaps = 5/160 (3%) Frame = +3 Query: 3 RGRRAAHRGGPGGTRRQQ**RQGRLRAQAQLAGG--AAHRASGPGVRGRMRAGGGAGRAA 176 R RRA R G RR+ GR RA+A G AA G RG RA GRA Sbjct: 321 RARRAGGRARAGRGRRRARAGAGRGRARAGAGRGRRAARHGRGARRRGGRRARRAGGRAG 380 Query: 177 CQPVRHAAAGTGAHQSAVRPARPPQPQPGPVAAQRAAAQLPGRRRQRGSGG--GGRWGCR 350 + R AG GA + R P A +R + RR RG G G R R Sbjct: 381 GRARRAGRAGPGARRGRGARGRGP-------ARRRGGGRRAPRRGGRGRGARPGRRRRAR 433 Query: 351 WWRRREEGGGGREGRGRRAAGDD*AGRP-GGDHGRRHRPQ 467 R + GGR GRG R A G P G G R RP+ Sbjct: 434 RRARADRRAGGRAGRGGRDARGAGGGAPAGAGRGPRVRPE 473 [6][TOP] >UniRef100_Q2IIH7 PE-PGRS family protein n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IIH7_ANADE Length = 677 Score = 59.7 bits (143), Expect = 1e-07 Identities = 72/206 (34%), Positives = 79/206 (38%), Gaps = 35/206 (16%) Frame = +3 Query: 3 RGRRAAHRGGPGGTRRQQ**RQGR----LRAQAQLAGGAAHR-------------ASGPG 131 R RR A GG G RR R GR R A+ A G AHR A+G G Sbjct: 432 RRRRRARAGGAAGRRRDPA-RAGRGAAPARGGARCAPGGAHRRDRRPGGAGHRPGAAGRG 490 Query: 132 VRGRMRAGGGA--GRAACQPVRHA-AAGTGAHQSAVRPARPPQPQPGPVAAQRAAAQLPG 302 R R R GGA GR P R A AG GA A G +R A + G Sbjct: 491 RRARGRRAGGAARGRRGAGPGRAALGAGAGARGGA-----------GGARRRRLALRAGG 539 Query: 303 RRRQRGSGGGGRWGCRWWRRREEGGGG-------REGRGRRAAGDD*AGRPGGDHGRR-- 455 +RG G G R RRR GGG R GRG A G AG PG GRR Sbjct: 540 GAGRRGRGERGGAAHRAPRRRVRPGGGVRARQDRRAGRGEAAGG--LAGAPGRARGRRGD 597 Query: 456 ------HRPQHHHHYRRCLRDCVRRG 515 RP+ +RR R G Sbjct: 598 RGARAARRPRRRAGHRRAAHRGSRGG 623 [7][TOP] >UniRef100_C4RFH6 NapH phosphatase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFH6_9ACTO Length = 351 Score = 59.7 bits (143), Expect = 1e-07 Identities = 53/130 (40%), Positives = 58/130 (44%), Gaps = 7/130 (5%) Frame = +3 Query: 102 GAAHRASGPGVRGRMRAGGGAGRAACQPVRHAAAGTGAHQSAVRPARPPQPQPGPVAAQR 281 G A +GPG R R+RAG A R P+R A GA RP RP GPV R Sbjct: 131 GVAPADAGPGQRARLRAGLPARRGL--PLRRRPAHRGA-----RPVRPG----GPV--HR 177 Query: 282 AAAQLPGRRRQRG-------SGGGGRWGCRWWRRREEGGGGREGRGRRAAGDD*AGRPGG 440 A A LP +RG +G G G R R G R GRR G A RPGG Sbjct: 178 AGAVLPAALPRRGLAAARPDAGRAGSHG-RLLTARSHRGHPRRRLGRRQPGVAAAARPGG 236 Query: 441 DHGRRHRPQH 470 D RR RP H Sbjct: 237 DRRRRQRPGH 246 [8][TOP] >UniRef100_B1VYN5 Translation initiation factor IF-2 n=1 Tax=Streptomyces griseus subsp. griseus NBRC 13350 RepID=IF2_STRGG Length = 1038 Score = 59.3 bits (142), Expect = 1e-07 Identities = 52/148 (35%), Positives = 60/148 (40%), Gaps = 4/148 (2%) Frame = +3 Query: 33 PGGTRRQQ**RQGRLRAQAQLAGGAAHRASGPGVRGRMRAGGGAGRAACQPVRHAAAGTG 212 PGG + R G R Q GGA G G G GG R AG Sbjct: 246 PGGGQE----RPGAPRPQGSGPGGAPRPQGGQGQGGARPTPGGMPRPQAPRPGGGPAGNR 301 Query: 213 AHQSAV--RPARPPQPQPGPVAAQRAAAQLPGRRRQRGSGGGGRWGCRWWRRREEGGGGR 386 + + RPA P+P PG + PG + G+GGGGR G + R GGGG Sbjct: 302 PNPGMMPQRPAAGPRPGPG------GGGRGPGGGGRPGAGGGGRPGGGGFAGRPGGGGGG 355 Query: 387 EGRGRRA--AGDD*AGRPGGDHGRRHRP 464 GR A G AGRPGG G RP Sbjct: 356 GFAGRPAGPGGGGGAGRPGGGGGFGGRP 383 [9][TOP] >UniRef100_Q8GFF2 Putative uncharacterized protein n=1 Tax=Streptomyces aureofaciens RepID=Q8GFF2_STRAU Length = 579 Score = 58.2 bits (139), Expect = 3e-07 Identities = 54/150 (36%), Positives = 60/150 (40%), Gaps = 5/150 (3%) Frame = -1 Query: 451 RP*SPPGRPAQSSPA-ALRPRPSRPPPPSSRLRHHRHPHLPPPPLPR*RRRPGSWAAAR* 275 RP SPP RP SPA A PR + P P+ R P P PP+PR RR P + Sbjct: 430 RPASPPTRPTAPSPAPAAPPRAAAAPTPA-----RRPPPPPTPPVPRARRGPAAG----- 479 Query: 274 AATGPG*GCGGRAGRTAD*WAPVPAAACLTGWHAARPAPPPARIR----PRTPGPEARCA 107 GR T D A A A G APPP R R PR P P A Sbjct: 480 ---------NGRPPSTRDRTAGTRAPASPPG------APPPVRRRRPPPPRAPPPHHPSA 524 Query: 106 APPASWA*ARRRPCRYYCCRLVPPGPPRCA 17 P++ A R RP P PPR A Sbjct: 525 RNPSARATPRPRPPPRPSAAARPEPPPRAA 554 [10][TOP] >UniRef100_C7NLV9 DNA/RNA helicase, superfamily II n=1 Tax=Kytococcus sedentarius DSM 20547 RepID=C7NLV9_KYTSD Length = 573 Score = 57.8 bits (138), Expect = 4e-07 Identities = 53/166 (31%), Positives = 62/166 (37%), Gaps = 13/166 (7%) Frame = +3 Query: 3 RGRRAAHRGGPGGTRRQQ**RQGRLRAQAQLAGGAAHRASGPGVRGRMRAGGGAGRAACQ 182 RG R+ RGG GG R GR + G G GR AGG GR+ + Sbjct: 412 RGGRSGGRGGSGGVRGA-----GRSGGRGGSGGSGRGGRGAGGSGGRGAAGGSGGRSGGR 466 Query: 183 PVRHAAAGTGAHQSAVRPARPPQPQPGPVA-------AQRAAAQLPGRRRQ------RGS 323 +G G VR P+ G +R A + P R + RG Sbjct: 467 GASTGGSGRGGDGGPVRFTSESSPRGGSAGRSGDAPRGERGAGRPPRNRGEASARPARGE 526 Query: 324 GGGGRWGCRWWRRREEGGGGREGRGRRAAGDD*AGRPGGDHGRRHR 461 GG GR R R R EGG GR RG G A GG GR R Sbjct: 527 GGSGR---RPERSRPEGGSGRPARGE--GGSRPARAAGGSGGRAPR 567 [11][TOP] >UniRef100_Q89X06 Blr0521 protein n=1 Tax=Bradyrhizobium japonicum RepID=Q89X06_BRAJA Length = 745 Score = 56.2 bits (134), Expect = 1e-06 Identities = 54/149 (36%), Positives = 60/149 (40%), Gaps = 3/149 (2%) Frame = -1 Query: 442 SPPGRPAQSSPAALRPRPSRPPPPSSRLRHHRHPHLPPPP--LPR*RRRPGSWAAAR*AA 269 +PP PA PAA PRP+ PPPP P PPPP P+ P + A + A Sbjct: 75 APPHPPAAPPPAAAPPRPAAPPPPPPPPAARPAPPPPPPPPAAPKQPSPPPAAAPQQHAP 134 Query: 268 TGPG*G-CGGRAGRTAD*WAPVPAAACLTGWHAARPAPPPARIRPRTPGPEARCAAPPAS 92 T P R T AP PAAA HA P PPPA TP P PP + Sbjct: 135 TPPPPAPPAARPAPTPP--APPPAAA---PQHAPPPPPPPAARPTPTPPP------PPPA 183 Query: 91 WA*ARRRPCRYYCCRLVPPGPPRCAARRP 5 AR P V P PP RP Sbjct: 184 GPAARPTPAPTATPTPVAP-PPAAPTARP 211 [12][TOP] >UniRef100_Q08TA4 Fibrillar collagen chain FAp1 alpha n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08TA4_STIAU Length = 945 Score = 55.8 bits (133), Expect = 2e-06 Identities = 61/181 (33%), Positives = 66/181 (36%), Gaps = 30/181 (16%) Frame = +3 Query: 9 RRAAHRGGPGGTRRQQ**RQGRLRAQAQLAGGAAHRASGPGVRGRMRAGGGAGRAA---- 176 ++ HR GG RR AGG R PG RGR GG R Sbjct: 686 QQRGHRPSRGGPRRAG-------------AGGRGPRGDAPGERGRGHPGGVPRRVCPAPG 732 Query: 177 CQPVRH----AAAG-TGAHQSAVRPARPPQPQPGPVAAQRAAAQLPGRRRQRGS------ 323 +P R A G TG Q PAR +PG A R Q PG R+ G Sbjct: 733 ARPARQLRGRAVPGLTGDAQGPGAPARLRAVRPGAGAGPRLRHQRPGGPRREGCLGRVRR 792 Query: 324 ----------GGGGRWGCRWWRRREEGGGGREGRGRRAAGD-----D*AGRPGGDHGRRH 458 GGG R R GGGG RGRRA GD A RPGG G R Sbjct: 793 LPLSPPGAGLPGGGLPRAPQQRARRLGGGGHP-RGRRAPGDRSAAVSHARRPGGGAGPRQ 851 Query: 459 R 461 R Sbjct: 852 R 852 [13][TOP] >UniRef100_Q6MWG9 Formin-like protein 18 n=1 Tax=Oryza sativa Japonica Group RepID=FH18_ORYSJ Length = 906 Score = 55.8 bits (133), Expect = 2e-06 Identities = 49/139 (35%), Positives = 51/139 (36%) Frame = -1 Query: 427 PAQSSPAALRPRPSRPPPPSSRLRHHRHPHLPPPPLPR*RRRPGSWAAAR*AATGPG*GC 248 PA P A P P+ PP P S HH H H PPPP P PG G Sbjct: 273 PAAPPPPAGPPPPAPPPLPPS--HHHHHGHHPPPPHP----------------LPPGAGA 314 Query: 247 GGRAGRTAD*WAPVPAAACLTGWHAARPAPPPARIRPRTPGPEARCAAPPASWA*ARRRP 68 G G AP P A H A PAPPP P G + PP A A RP Sbjct: 315 GAGTG------APPPPPA-----HPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRP 363 Query: 67 CRYYCCRLVPPGPPRCAAR 11 PP PP A R Sbjct: 364 PG---PGPGPPPPPGAAGR 379 [14][TOP] >UniRef100_UPI00016624C3 PREDICTED: hypothetical protein n=1 Tax=Homo sapiens RepID=UPI00016624C3 Length = 1128 Score = 55.5 bits (132), Expect = 2e-06 Identities = 72/212 (33%), Positives = 79/212 (37%), Gaps = 44/212 (20%) Frame = +3 Query: 3 RGRRAAHRGGPGGTRRQQ**RQ---------GRLRAQAQLAGG--AAHRA--------SG 125 RG R A G G T R RQ G L Q GG A HR +G Sbjct: 378 RGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAG 437 Query: 126 PGVRGRMRAGGGAGRAACQPVRHAA----AGTGAHQSAVRPARPP---------QPQPGP 266 G G +R GG GR QPV AA AG GA + R P Q GP Sbjct: 438 GGGTGEVRGGGSPGR---QPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQFGP 494 Query: 267 VAAQRAAAQLPGR--RRQRGSGGGGRWGC-RWWRRREEGGG-------GREGRGRRAAGD 416 R A+ R R G GGGG GC RR G G G+ RGRR A Sbjct: 495 RVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHH 554 Query: 417 D*AGRPGGDHGR--RHRPQHHHHYRRCLRDCV 506 GR + R RP HHH LR+ V Sbjct: 555 CSQGRNSQSRHQPGRDRPHHHHLELESLRERV 586 [15][TOP] >UniRef100_UPI0001662437 PREDICTED: hypothetical protein n=1 Tax=Homo sapiens RepID=UPI0001662437 Length = 801 Score = 55.5 bits (132), Expect = 2e-06 Identities = 72/212 (33%), Positives = 79/212 (37%), Gaps = 44/212 (20%) Frame = +3 Query: 3 RGRRAAHRGGPGGTRRQQ**RQ---------GRLRAQAQLAGG--AAHRA--------SG 125 RG R A G G T R RQ G L Q GG A HR +G Sbjct: 51 RGARLAESRGRGVTPRASWSRQPAGGPLSSEGHLLPLVQRDGGGLAEHRGREGEEGVRAG 110 Query: 126 PGVRGRMRAGGGAGRAACQPVRHAA----AGTGAHQSAVRPARPP---------QPQPGP 266 G G +R GG GR QPV AA AG GA + R P Q GP Sbjct: 111 GGGTGEVRGGGSPGR---QPVGRAAVTGEAGAGAAGRGAQSVRGPGVERRVAEGAQQFGP 167 Query: 267 VAAQRAAAQLPGR--RRQRGSGGGGRWGC-RWWRRREEGGG-------GREGRGRRAAGD 416 R A+ R R G GGGG GC RR G G G+ RGRR A Sbjct: 168 RVGLRQHAERVERAQRAAEGRGGGGGGGCGAQAHRRVVGQGQVRWEGVGQAARGRRMAHH 227 Query: 417 D*AGRPGGDHGR--RHRPQHHHHYRRCLRDCV 506 GR + R RP HHH LR+ V Sbjct: 228 CSQGRNSQSRHQPGRDRPHHHHLELESLRERV 259 [16][TOP] >UniRef100_C4RFQ8 Glycosyl transferase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFQ8_9ACTO Length = 599 Score = 55.5 bits (132), Expect = 2e-06 Identities = 62/169 (36%), Positives = 72/169 (42%), Gaps = 22/169 (13%) Frame = +3 Query: 9 RRAAHRGGPGGTRRQQ**RQGRLRAQAQLAGGAAHRASGPGVRGRMRAGGGAGRAAC--Q 182 RRA R G RR+ R+GR R GA RA P R AGGGAG + C + Sbjct: 47 RRAVARPGVDPGRRRGRARRGRHRRPT----GA--RAGCPPDRLVRAAGGGAGPSGCHPR 100 Query: 183 PVRHAAAGTGA-------HQSAVRPARPPQPQ--PGP----------VAAQRAAAQLPGR 305 P R G GA HQ RPAR P+P+ GP +A R +LP R Sbjct: 101 PGRACRRGNGAVRRCPGDHQRGPRPARTPEPERDGGPRLRLRRPRLGQSAGRRLRRLPAR 160 Query: 306 RRQRGSGG-GGRWGCRWWRRREEGGGGREGRGRRAAGDD*AGRPGGDHG 449 R GG GG G R R+ GG G R AGR GG+ G Sbjct: 161 RGGADRGGRGGPGGTPRGRWRDGRRGGLRGARR-------AGRRGGEGG 202 [17][TOP] >UniRef100_A2WAW1 Alanyl-tRNA synthetase n=1 Tax=Burkholderia dolosa AUO158 RepID=A2WAW1_9BURK Length = 914 Score = 55.5 bits (132), Expect = 2e-06 Identities = 61/164 (37%), Positives = 70/164 (42%), Gaps = 13/164 (7%) Frame = +3 Query: 9 RRAAHRGGPG----GTRRQQ**RQGRLRAQAQLAGGAAHRAS-GPGVRGRMRAGGGAGRA 173 RR HR G GTRR + GR A + AAHRAS G G R A G A Sbjct: 714 RRGDHRRQRGALRAGTRRTRAGSGGRAEGAA-VGAHAAHRASAGSGEVAREGAVGAEVEA 772 Query: 174 ACQPVRHAAAGTGAHQSAVRPARPPQPQPGPVAAQRAAAQLPGRRRQRGSGGGGRWGCRW 353 +P R A A G + R + + G A R Q G+ RG GGR + Sbjct: 773 RVEPGRRARATGGRRRRRAGAGRDARRR-GREDAARDGRQAEGQAEARGDRAGGRRRRQG 831 Query: 354 W--RRRE-----EGGGGREGRGRRAAGDD*AGRPGG-DHGRRHR 461 RRR+ EG G R G RRAAG RP G GRRHR Sbjct: 832 QPDRRRDAGREQEGEGRRAGELRRAAGRRQGRRPSGHGAGRRHR 875 [18][TOP] >UniRef100_Q8NP40 Translation initiation factor IF-2 n=1 Tax=Corynebacterium glutamicum RepID=IF2_CORGL Length = 1004 Score = 55.5 bits (132), Expect = 2e-06 Identities = 54/165 (32%), Positives = 66/165 (40%), Gaps = 15/165 (9%) Frame = +3 Query: 33 PGGTRRQQ**RQGRLRAQAQLAGGAAHRASGPGVRGRMRAGGGAG----------RAACQ 182 PGG R Q G+ R Q G + G G RG R G GAG + + Sbjct: 233 PGGGPRPQ----GQGRPGGQRDGQRDGQRDGQGNRGGQRQGAGAGGPRPQGGPRPQGGSR 288 Query: 183 PVRHAAAGTGAHQSAVRP--ARPPQPQPGPVAAQRAAAQLPGRRRQRGSGGGGRWGCRWW 356 P +A G S R R P P P + A+ PG+ + G GGG G Sbjct: 289 PQGGSAQGAQGAPSQERQGGGRRPSPAMMPPTPGQMPAKAPGKGGRGGQAGGGAGG---G 345 Query: 357 RRREEGGGGREGRGRRAAGDD*A-GRPGG--DHGRRHRPQHHHHY 482 R G GG GRG R G A GRPGG GR+ + Q + Y Sbjct: 346 FNRGGGTGGGAGRGGRRGGTAGAFGRPGGAPRRGRKSKRQKRNEY 390 [19][TOP] >UniRef100_A5E8N9 Putative uncharacterized protein n=1 Tax=Bradyrhizobium sp. BTAi1 RepID=A5E8N9_BRASB Length = 727 Score = 55.1 bits (131), Expect = 3e-06 Identities = 50/156 (32%), Positives = 57/156 (36%), Gaps = 10/156 (6%) Frame = -1 Query: 442 SPPGRPAQSSPAALRPRPSRPPPPSSRLRHHRHPHLPPPPLPR*RRRPGSWAAAR*AA-- 269 +P P P A PRP+ PPPP P PPPP P R P A A Sbjct: 71 APAPPPPPPPPRAEPPRPAPPPPPPPPRAEPPRPAAPPPPPPPPRAEPPHAAPPPSRAEP 130 Query: 268 -----TGPG*GCGGRAGRTAD*WAPVPAAACLTGWHAARPAPPPAR--IRPRTPGPEARC 110 + P T AP PA+ A PAPPPA +RP P P A Sbjct: 131 PAPPPSRPAPPVAAPPVHTPPPPAPPPASPHEPARPATPPAPPPAAAPVRPTPPTPPAAT 190 Query: 109 -AAPPASWA*ARRRPCRYYCCRLVPPGPPRCAARRP 5 A PP S + +RP PP PP P Sbjct: 191 PAPPPPSSSAPNQRPGTPPSPVTPPPSPPAAGNAPP 226 Score = 53.5 bits (127), Expect = 8e-06 Identities = 48/146 (32%), Positives = 51/146 (34%) Frame = -1 Query: 451 RP*SPPGRPAQSSPAALRPRPSRPPPPSSRLRHHRHPHLPPPPLPR*RRRPGSWAAAR*A 272 RP PP PA AA RP P+ PPPP P PPPP P R P AA Sbjct: 54 RPAPPP--PAPPPAAAPRPAPAPPPPPPPPRAEPPRP-APPPPPPPPRAEPPRPAAPPPP 110 Query: 271 ATGPG*GCGGRAGRTAD*WAPVPAAACLTGWHAARPAPPPARIRPRTPGPEARCAAPPAS 92 P P A A PAPPP+R P P PPA Sbjct: 111 PPPP---------------RAEPPHAAPPPSRAEPPAPPPSRPAPPVAAPPVHTPPPPAP 155 Query: 91 WA*ARRRPCRYYCCRLVPPGPPRCAA 14 + P R PP PP AA Sbjct: 156 PPASPHEPAR----PATPPAPPPAAA 177 [20][TOP] >UniRef100_A8LE49 Putative uncharacterized protein n=1 Tax=Frankia sp. EAN1pec RepID=A8LE49_FRASN Length = 1079 Score = 54.7 bits (130), Expect = 4e-06 Identities = 60/164 (36%), Positives = 63/164 (38%), Gaps = 15/164 (9%) Frame = +3 Query: 6 GRRAAH--RGGPGGTRRQQ**RQGRLRAQAQLAGGAAHRAS---------GPGVRGRMRA 152 GRR A R GP + G R ++ G A R GP G A Sbjct: 30 GRRDAPGARRGPSSSGSSGRDAGGEARRSGRVTRGDAGRTGFVRRADGGRGPAPAGASAA 89 Query: 153 GGGAGRAACQPVRHAAAGTGAHQSAVRPARPPQPQPGPVAAQRAAAQLPGRRRQRGSGGG 332 G GAG A GTG R P Q P AA R A GR GSGG Sbjct: 90 GTGAGGRGAP----AWQGTGRAGGPSRQGGPGQGAGRPKAAWRPAGTGQGRGGAGGSGGP 145 Query: 333 GRWGCRWWR-RREEGGGGREGRGRRAAGD---D*AGRPGGDHGR 452 G G RW R GG RE G R AGD AGRPG HGR Sbjct: 146 G--GERWGRPASSREGGPREASGGRPAGDRWSGGAGRPGA-HGR 186 [21][TOP] >UniRef100_A4QEZ2 Translation initiation factor IF-2 n=1 Tax=Corynebacterium glutamicum R RepID=IF2_CORGB Length = 1003 Score = 54.7 bits (130), Expect = 4e-06 Identities = 54/170 (31%), Positives = 68/170 (40%), Gaps = 20/170 (11%) Frame = +3 Query: 33 PGGTRRQQ**RQGRLRAQAQLAGGAAHRASGPGVRGRMRAGGGAG----------RAACQ 182 PGG R Q G+ R Q G + G G RG R G GAG + + Sbjct: 227 PGGGPRPQ----GQGRPGGQRDGQRDGQRDGQGNRGGQRQGAGAGGPRPQGGPRPQGGSR 282 Query: 183 PVRHAAAGTGAHQSAVRPA-------RPPQPQPGPVAAQRAAAQLPGRRRQRGSGGGGRW 341 P +A G A + P+ R P P P + A+ PG+ + G GGG Sbjct: 283 PQGGSAQGGSAKGAQGAPSQERQGGGRRPSPAMMPPTPGQMPAKAPGKGGRGGQAGGGAG 342 Query: 342 GCRWWRRREEGGGGREGRGRRAAGDD*A-GRPGG--DHGRRHRPQHHHHY 482 G R G GG GRG R G A GRPGG GR+ + Q + Y Sbjct: 343 G---GFNRGGGTGGGAGRGGRRGGTAGAFGRPGGAPRRGRKSKRQKRNEY 389 [22][TOP] >UniRef100_Q7VYR5 Pseudouridine synthase n=1 Tax=Bordetella pertussis RepID=Q7VYR5_BORPE Length = 588 Score = 54.3 bits (129), Expect = 5e-06 Identities = 50/147 (34%), Positives = 62/147 (42%), Gaps = 15/147 (10%) Frame = +3 Query: 6 GRRAAHRGGPGGTRRQQ**RQGRLRAQAQLAGGAAHRASGPGVRGRMRAGG-----GAGR 170 G+ +G GG + Q+ QGR A AQ AGG A G RG +AGG GA Sbjct: 445 GKGKPAKGKAGGDKPQR--GQGRKAAGAQ-AGGQGAAAKPAGARGGKKAGGRAAAPGAKG 501 Query: 171 AACQPVRHAAAGTGAHQSAVRPARPPQPQPGPVAAQRAAAQLPGRRRQRGSGGGGRWGCR 350 A + + AA G + V P GP A + A+ G G GGGG G R Sbjct: 502 AGGRAGGNKAASAGGKAAGVAKPASPTGNRGPAAPKPQRARRGGGGAGGGGGGGGGGGGR 561 Query: 351 W--WRRREEGG--------GGREGRGR 401 W+ + G GGR GRGR Sbjct: 562 GDDWQPKGAGAHESRLGFMGGRGGRGR 588 [23][TOP] >UniRef100_Q8CJQ8 Translation initiation factor IF-2 n=1 Tax=Streptomyces coelicolor RepID=IF2_STRCO Length = 1033 Score = 54.3 bits (129), Expect = 5e-06 Identities = 53/151 (35%), Positives = 59/151 (39%), Gaps = 10/151 (6%) Frame = +3 Query: 27 GGPGGTRRQQ**RQGRLRAQAQLAGGAAHRASGPGVRG---RMRAGGGAGRAACQPVRHA 197 GGPGG A G R GPG +G R +A GG + R Sbjct: 246 GGPGG------------------APGGGPRPQGPGGQGGGPRPQAPGGNRPSPGSMPRPQ 287 Query: 198 AAGTGAHQSAVRPARPPQPQPGPVAAQRAAAQLPGRRRQ-RGSGGGGRWGCRWWRRREEG 374 G G RP P+P PG + + AA PG RG GG GR G R G Sbjct: 288 GGGAGP-----RPGGGPRPNPGMMPQRPAAGPRPGPGGGGRGPGGAGRPGGGGGR---PG 339 Query: 375 GGGREGR------GRRAAGDD*AGRPGGDHG 449 GGG GR GR G AGRPGG G Sbjct: 340 GGGFAGRPGGGGGGRPGGGGGFAGRPGGGGG 370 [24][TOP] >UniRef100_O91332 EBNA-1 n=1 Tax=Macacine herpesvirus 4 RepID=O91332_9GAMA Length = 511 Score = 53.9 bits (128), Expect = 6e-06 Identities = 50/149 (33%), Positives = 55/149 (36%) Frame = +3 Query: 6 GRRAAHRGGPGGTRRQQ**RQGRLRAQAQLAGGAAHRASGPGVRGRMRAGGGAGRAACQP 185 G + GG GG R GG A SG G G AGGGAG + Sbjct: 92 GTGGSSAGGAGGNSR---------------GGGGAGVGSGRGAGGSGGAGGGAGGSLGGG 136 Query: 186 VRHAAAGTGAHQSAVRPARPPQPQPGPVAAQRAAAQLPGRRRQRGSGGGGRWGCRWWRRR 365 ++ G+GA S G A A GR R RG GGR G R Sbjct: 137 AGGSSGGSGAGGSGA---------GGSGAGGSGAGGSRGRGRGRGGSAGGRGG-----RG 182 Query: 366 EEGGGGREGRGRRAAGDD*AGRPGGDHGR 452 GGGG GRGR GR GG GR Sbjct: 183 GGGGGGSRGRGR--------GRGGGSRGR 203 [25][TOP] >UniRef100_A7HHJ4 LigA n=1 Tax=Anaeromyxobacter sp. Fw109-5 RepID=A7HHJ4_ANADF Length = 547 Score = 53.9 bits (128), Expect = 6e-06 Identities = 64/179 (35%), Positives = 68/179 (37%), Gaps = 30/179 (16%) Frame = +3 Query: 6 GRRAAHRGGPGGTRRQQ**RQGRLRAQAQLAGGAAHRASG----------PGVRGRMRAG 155 G R R G R +G LR +A GG AHR PG RG AG Sbjct: 219 GVRLRRRRRSGAAPRPLDEGEGELRLRAG-TGGRAHRLRARAGRPPLDVRPGDRGAGDAG 277 Query: 156 GGAGRAACQPVRHAAAGTGAHQSAVR--PARPPQPQPGPVAAQRAAAQLPGR--RRQRGS 323 GG G R A G G + A R PAR P+PG R AAQ P R RR RG Sbjct: 278 GGRGAHGRGERRRRARG-GRERRAPRSGPARGRGPEPG----ARRAAQAPARPARRSRGR 332 Query: 324 GGGGR---------WGCRWWR-------RREEGGGGREGRGRRAAGDD*AGRPGGDHGR 452 G GR G R R RR G R R G A RPG D GR Sbjct: 333 GRRGRRVRAVRRRPGGARALRHSRERAVRRPGGHTARSDPERGRGGRHRAARPGADRGR 391 [26][TOP] >UniRef100_C8X9W2 Membrane protein-like protein n=1 Tax=Nakamurella multipartita DSM 44233 RepID=C8X9W2_9ACTO Length = 497 Score = 53.9 bits (128), Expect = 6e-06 Identities = 57/179 (31%), Positives = 68/179 (37%), Gaps = 25/179 (13%) Frame = +3 Query: 9 RRAAHRGGPGGTRRQQ**RQGRLRAQAQLAGGAAHRASGPGVR---GRMRAGGGAGRAAC 179 RR R GP R + + RA A G A GPG R GR G + +C Sbjct: 299 RRGVRRAGPARGHRTR----HQHRAAADGRAGPAAGGPGPGRRPADGRRTTAGSSPSRSC 354 Query: 180 QP------VRHAAAGTGAHQSAVRPARPPQPQ----PGPVAAQRAAAQLPGRRRQRGSGG 329 +P + +A GA RP RPP P P A + P R R+ G+ Sbjct: 355 RPSSGCCAIWTCSARPGARG---RPGRPPWPNRWRSSAPPATCCRRRRWPARCRRTGAPT 411 Query: 330 GG--------RWGCRWWRRREEGGGGREGRGRR----AAGDD*AGRPGGDHGRRHRPQH 470 GG R GCRW R G G R GR RR G A G GR P+H Sbjct: 412 GGPSRPTRPVRIGCRWAAPRATGPGVRSGRTRRWTPGGCGRCPARPAGPAPGRPVAPEH 470 [27][TOP] >UniRef100_C4RCE6 Sensor protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RCE6_9ACTO Length = 1347 Score = 53.9 bits (128), Expect = 6e-06 Identities = 58/157 (36%), Positives = 67/157 (42%), Gaps = 13/157 (8%) Frame = +3 Query: 3 RGRRAAHRGGPGGTRRQQ**RQGRLRAQAQLAGGAAHRASGPGVRGRMRAGGGAG---RA 173 RG RAA RG R++ R+GR GA A+ P RG RAGG RA Sbjct: 1074 RGPRAATRGRSRRRARRRPGRRGR---------GAGRHATPPRRRGGARAGGDRAEPVRA 1124 Query: 174 AC----QPVRHAAAGTGA--HQSAVRPARPPQPQPGPVAAQR---AAAQLPGRRRQRGSG 326 A P AA TG H+ R RP +P G + +R A LPGR RG G Sbjct: 1125 AAARRPDPAERAAQPTGGLPHRPPGRRERPVRPHRGGLRGRRERHRAPGLPGRADHRGGG 1184 Query: 327 GGGRWGCRWWRRREEGGGGREGRGRRA-AGDD*AGRP 434 RR GGG G G+RA AG D G P Sbjct: 1185 D---------PRRRHGGG--HGAGQRAVAGVDRRGLP 1210 [28][TOP] >UniRef100_Q6ND96 Possible OmpA family member n=1 Tax=Rhodopseudomonas palustris RepID=Q6ND96_RHOPA Length = 689 Score = 53.5 bits (127), Expect = 8e-06 Identities = 48/140 (34%), Positives = 55/140 (39%), Gaps = 2/140 (1%) Frame = -1 Query: 439 PPGRPAQSSPAALRPRPSRPPPPSSRLRHHRHPHL--PPPPLPR*RRRPGSWAAAR*AAT 266 PP A +PA R P PPPPS PH PPPP P+ P + A R AA Sbjct: 101 PPPPAAAPAPAPKRAEPPPPPPPSHSAPPPPPPHAAPPPPPAPKPSAPPTAAPAERPAAP 160 Query: 265 GPG*GCGGRAGRTAD*WAPVPAAACLTGWHAARPAPPPARIRPRTPGPEARCAAPPASWA 86 P APV A G R PPP + P P A AAP A+ Sbjct: 161 PPA-------------AAPVRPPAPPAGEAPQRRGPPPGAVPPNAVPPNA--AAPDAAKP 205 Query: 85 *ARRRPCRYYCCRLVPPGPP 26 A ++P R PPG P Sbjct: 206 DAAKQPPGER--RGPPPGAP 223