AV643100 ( HCL063g04_r )

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[1][TOP]
>UniRef100_A8IGG5 Mixed lineage protein kinase n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8IGG5_CHLRE
          Length = 785

 Score =  333 bits (853), Expect = 5e-90
 Identities = 159/160 (99%), Positives = 159/160 (99%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR
Sbjct: 40  IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 99

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH
Sbjct: 100 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 159

Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRRTLDCFDHCVALVDT 481
           LEKDIALQLRAHDNNSLAAAYG LRRTLDCFDHCVALVDT
Sbjct: 160 LEKDIALQLRAHDNNSLAAAYGNLRRTLDCFDHCVALVDT 199

[2][TOP]
>UniRef100_A8I2K3 FhlA domain-contained protein kinase (Fragment) n=1
           Tax=Chlamydomonas reinhardtii RepID=A8I2K3_CHLRE
          Length = 951

 Score =  110 bits (276), Expect = 4e-23
 Identities = 63/164 (38%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFK-RGDFPWRWSFCGWTMASRND--QIMVIPDALK 172
           +F+ P ALVA +    IFIR    A K   D  WR+S   W M + +D   ++++PDA  
Sbjct: 413 VFQLPVALVAAYRSANIFIRST--ALKLTDDDQWRYSLAQWAMLNVHDLRDVLLVPDATL 470

Query: 173 DARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
           D RF     V   P VRF+C +PL +S G  +GTLC AD + R  + +  +V+NNL  LV
Sbjct: 471 DDRFRTQYCVANEPRVRFFCASPLRSSTGELLGTLCMADFQERMLEPANLLVVNNLQSLV 530

Query: 353 VRHLEKDIALQLRAHDNN-SLAAAYGXLRRTLDCFDHCVALVDT 481
           +R LE+D+AL     +N  +       + R LD F+ C+  VDT
Sbjct: 531 IRQLERDMALAAERLENEVATEQLQQEMMRALDHFEKCIMFVDT 574

[3][TOP]
>UniRef100_A8IR08 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8IR08_CHLRE
          Length = 147

 Score =  105 bits (262), Expect = 2e-21
 Identities = 50/114 (43%), Positives = 74/114 (64%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P ALV+L D  R + +  +G   R     + SFC WT+   + +++V+ +AL+D R
Sbjct: 35  VFKCPIALVSLVDKDRQWFKSVQGLPVR-QTDRKSSFCAWTLLPEHPEVLVVENALEDIR 93

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLA 343
           F NN +V G P +RFY G PL+A+NG R+G+LC  D KPR+FDA  C +L N+A
Sbjct: 94  FRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQFDAESCNMLANMA 147

[4][TOP]
>UniRef100_A3YZB7 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 5701
           RepID=A3YZB7_9SYNE
          Length = 337

 Score =  103 bits (258), Expect = 5e-21
 Identities = 54/122 (44%), Positives = 76/122 (62%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF+ P AL++L D  R +    EG  +  + P   +FC  T+A+  D++MV+PDAL+D R
Sbjct: 50  IFDMPIALISLVDHDRQWFLSREG-LEVSETPREVAFCAHTIAT--DEVMVVPDALQDER 106

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   PG+RFY G PL   +GH +GTLC  D KPREF   +   L  LA+LV+R 
Sbjct: 107 FSSNPLVLSPPGIRFYAGAPLRTKDGHNLGTLCVIDQKPREFSPEQKQQLRMLADLVMRE 166

Query: 362 LE 367
           +E
Sbjct: 167 IE 168

[5][TOP]
>UniRef100_A4VFL1 Sensor protein n=1 Tax=Pseudomonas stutzeri A1501
           RepID=A4VFL1_PSEU5
          Length = 793

 Score = 95.9 bits (237), Expect = 1e-18
 Identities = 54/137 (39%), Positives = 78/137 (56%)
 Frame = +2

Query: 8   EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
           + P AL++L DDRR + +   G     + P   SFC +T+    +QI  +PDAL+D RF 
Sbjct: 42  DTPIALISLVDDRRQWFKSRVG-LDVSETPRDISFCTYTITG--EQIFEVPDALQDPRFR 98

Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
           +N +V+G P +RFY GTPL + +GH +GTLC  D KPR   + +  +L  L   V+R  E
Sbjct: 99  DNPLVQGDPHIRFYAGTPLTSPDGHNLGTLCVIDRKPRRLSSEQREILERLGRQVIRLFE 158

Query: 368 KDIALQLRAHDNNSLAA 418
           +     L AH +   AA
Sbjct: 159 Q----HLLAHRHAEQAA 171

[6][TOP]
>UniRef100_B5IIP1 GAF sensor diguanylate cyclase n=1 Tax=Cyanobium sp. PCC 7001
           RepID=B5IIP1_9CHRO
          Length = 364

 Score = 95.9 bits (237), Expect = 1e-18
 Identities = 50/122 (40%), Positives = 72/122 (59%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           + E P AL++L D  R +     G     + P   +FC  T+     + +V+PDA  D R
Sbjct: 42  VLETPIALISLIDKNRQWFLARHG-LDITETPREQAFCAHTITE--GEPLVVPDARTDPR 98

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           FC+N +V G PGVRFY G PL + +GH +G+LC  D +PR   A++  +L +LA+LVVR 
Sbjct: 99  FCSNPLVLGEPGVRFYAGAPLASPDGHNLGSLCVIDRQPRRLSAAQVKLLQDLADLVVRE 158

Query: 362 LE 367
           LE
Sbjct: 159 LE 160

[7][TOP]
>UniRef100_B8KKX5 Diguanylate cyclase (Ggdef domain) n=1 Tax=gamma proteobacterium
           NOR5-3 RepID=B8KKX5_9GAMM
          Length = 334

 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 54/134 (40%), Positives = 82/134 (61%), Gaps = 1/134 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P +LV+L D  R + + A+G     + P   SFCG  +A   D+++ +P+AL D R
Sbjct: 41  MFGVPISLVSLVDSERQWFKSAQG-LDATETPRDISFCGHAIAG--DELLYVPNALDDKR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PL+A+NGH++GTLC  D +PRE D    ++L +LA +V   
Sbjct: 98  FHDNPLVTAEPHIRFYAGNPLMAANGHKVGTLCLIDSEPRELDDEDKLLLEDLAVMV--- 154

Query: 362 LEKDIA-LQLRAHD 400
            E++IA LQ+   D
Sbjct: 155 -EQEIASLQMATLD 167

[8][TOP]
>UniRef100_Q4ZNM1 EAL:GAF n=1 Tax=Pseudomonas syringae pv. syringae B728a
           RepID=Q4ZNM1_PSEU2
          Length = 607

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 51/121 (42%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
           FEAP AL+++ D+ R F R   G  K  + P   SFC +T+ S  D +  IPDA  DARF
Sbjct: 43  FEAPIALISIVDEHRQFFRARVG-LKARETPRNVSFCAYTILS--DTLFEIPDATLDARF 99

Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRH 361
            NN +V G P +R+Y G PLI  +G  +G+LC  D KPRE     +  +L   A LV++ 
Sbjct: 100 VNNGLVTGHPDIRYYAGAPLITDDGIALGSLCVIDTKPREPMSEYQTQMLKRFASLVMKR 159

Query: 362 L 364
           +
Sbjct: 160 I 160

[9][TOP]
>UniRef100_A4WR53 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides
           ATCC 17025 RepID=A4WR53_RHOS5
          Length = 334

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 5/154 (3%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I+  P A + L DD+R++++   GA +  D P   +FC  T+  R+++++ I D L D R
Sbjct: 38  IYAVPMAAMTLIDDQRLWLKSHSGATEV-DIPRCHAFCDQTI--RDNKVVQIVDTLSDPR 94

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N  V G P VR Y G PL   +GH IGT+C AD  PR++ A    VL +LA L V  
Sbjct: 95  FRDNPYVVGAPHVRSYLGAPLTTPDGHNIGTICIADTIPRDYTAVDREVLADLARLAVIQ 154

Query: 362 LEKDIALQLRAHDNNSLAAA-----YGXLRRTLD 448
           LE    L+L+A ++    AA        LRR +D
Sbjct: 155 LE----LRLQATEDQQTTAATRRAFLSVLRRAMD 184

[10][TOP]
>UniRef100_B2JFQ6 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia phymatum
           STM815 RepID=B2JFQ6_BURP8
          Length = 319

 Score = 91.3 bits (225), Expect = 3e-17
 Identities = 52/133 (39%), Positives = 72/133 (54%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P A V L D  R + +   G  +  + P   SFCG  +A  +D + ++ DA  D R
Sbjct: 41  LFGVPIAAVTLVDSHRQWFKSHPG-LEASETPRDVSFCGHAIA--DDDLFLVNDASLDVR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +RFY G PL  SNG R+GTLC  DVKPR  D    V+L +LA +  + 
Sbjct: 98  FADNPLVTGDPNIRFYAGYPLTVSNGSRLGTLCLIDVKPRALDDEERVLLRDLARMAEQE 157

Query: 362 LEKDIALQLRAHD 400
           +    A+QL   D
Sbjct: 158 I---AAVQLATTD 167

[11][TOP]
>UniRef100_C6NKW0 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
           sensor(S) n=1 Tax=Pectobacterium wasabiae WPP163
           RepID=C6NKW0_9ENTR
          Length = 722

 Score = 90.9 bits (224), Expect = 4e-17
 Identities = 58/124 (46%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
 Frame = +2

Query: 2   IFEAPAALVALFD-DRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDA 178
           IF AP  LV+L + +R++F       F   + P   SFC  T+  +  +IMV+PDALKD 
Sbjct: 41  IFNAPIVLVSLVEAERQLFAASVGVPFC--ETPRDISFCAHTILKK--KIMVVPDALKDV 96

Query: 179 RFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVV 355
           RF NN +V G P +RFY G PLI S+GH IGTLC  D+KPR     R    L +LA LV+
Sbjct: 97  RFKNNPLVVGIPYIRFYAGIPLITSSGHAIGTLCIIDLKPRAAFTKRDEHNLQDLASLVM 156

Query: 356 RHLE 367
             LE
Sbjct: 157 DKLE 160

[12][TOP]
>UniRef100_Q0G2R6 Putative signal transduction histidine kinase with GAF domain n=1
           Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G2R6_9RHIZ
          Length = 694

 Score = 90.5 bits (223), Expect = 5e-17
 Identities = 57/151 (37%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P ALV+L D  R + + A   F+  + P   S C   ++SR+  ++VIPD  KD R
Sbjct: 64  LFDVPVALVSLVDRHRQWFK-ARSGFELSETPIAQSVCAHALSSRD--VLVIPDLTKDLR 120

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADV--KPREFDASRCVVLNNLAELVV 355
             +N +V G P +RFY G PL+  +GH +GTLC  DV  +P+ F  ++   L  LA+ VV
Sbjct: 121 TASNTLVTGEPKIRFYAGAPLVTPDGHVLGTLCIIDVVSRPQGFSVNQAEDLKKLADQVV 180

Query: 356 RHLEKDIALQLRAHDNNSLAAAYGXLRRTLD 448
             LE  +A+  R  DN    AA    R   D
Sbjct: 181 ALLEMRLAVGQR--DNLLRQAAEARTRAEED 209

[13][TOP]
>UniRef100_Q4KBH0 Diguanylate cyclase, putative n=1 Tax=Pseudomonas fluorescens Pf-5
           RepID=Q4KBH0_PSEF5
          Length = 322

 Score = 90.1 bits (222), Expect = 7e-17
 Identities = 52/137 (37%), Positives = 76/137 (55%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P ALV+L D  R + +   G     +     SFCG  +    DQI+ +PDA  D R
Sbjct: 41  LFNVPIALVSLVDADRQWFKSCVG-LDVSETSRDISFCGHAILG--DQILTVPDAGLDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G PG+RFY G PL  +NG ++GTLC  D+KPR+ D     +L +LA +  + 
Sbjct: 98  FHDNPLVVGAPGIRFYAGCPLTVTNGSKLGTLCLIDIKPRDLDDEDRALLRDLARMAEQE 157

Query: 362 LEKDIALQLRAHDNNSL 412
           L    A+Q+ + D  +L
Sbjct: 158 L---AAVQMASMDELTL 171

[14][TOP]
>UniRef100_C5AGJ9 Diguanylate cyclase n=1 Tax=Burkholderia glumae BGR1
           RepID=C5AGJ9_BURGB
          Length = 324

 Score = 90.1 bits (222), Expect = 7e-17
 Identities = 55/134 (41%), Positives = 72/134 (53%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF+ P ALV+L D  R + +   G   R +     SFC   + S  D  +VIPDA  D R
Sbjct: 41  IFDVPIALVSLIDANRQWFKSCFGLEAR-ETSRDVSFCAHAILS--DDTLVIPDATLDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F  N +V G PG+RFY G PL   +G  +GTLC  D +PRE DA+    L +LA L  R 
Sbjct: 98  FAGNPLVTGAPGIRFYAGHPLALPDGTNLGTLCLIDTRPREIDATDLSHLRDLANLAERE 157

Query: 362 LEKDIALQLRAHDN 403
           +    A+QL   D+
Sbjct: 158 V---AAVQLATLDS 168

[15][TOP]
>UniRef100_Q6D4F7 Putative signaling protein n=1 Tax=Pectobacterium atrosepticum
           RepID=Q6D4F7_ERWCT
          Length = 722

 Score = 89.7 bits (221), Expect = 9e-17
 Identities = 57/124 (45%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
 Frame = +2

Query: 2   IFEAPAALVALFD-DRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDA 178
           IF AP  LV+L + +R++F       F   + P   SFC  T+  +  +IMV+PDALKDA
Sbjct: 41  IFSAPIVLVSLVEAERQLFAASVGVPFC--ETPRDISFCAHTILKK--KIMVVPDALKDA 96

Query: 179 RFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVV 355
           RF NN +V G P +RFY G PLI  +GH IGTLC  D+KPR     R    + +LA LV+
Sbjct: 97  RFKNNPLVVGIPYIRFYAGIPLITPSGHAIGTLCIIDLKPRTTFTKRDEHNMQDLASLVM 156

Query: 356 RHLE 367
             LE
Sbjct: 157 DKLE 160

[16][TOP]
>UniRef100_C9P933 Signal transduction histidine kinase n=1 Tax=Vibrio metschnikovii
           CIP 69.14 RepID=C9P933_VIBME
          Length = 642

 Score = 89.7 bits (221), Expect = 9e-17
 Identities = 48/117 (41%), Positives = 69/117 (58%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF  P AL++L D  R + +  +G   +   P   SFCG  +   N +I VI +AL D R
Sbjct: 41  IFSVPIALISLVDRDRQWFKSRQGLDAQ-QTPREISFCGHAIL--NSEIFVIENALVDQR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
           FC+N +V G P +RFY G PL ++ G+RIGTLC  D +P+ F + +  +L +LA  V
Sbjct: 98  FCDNPLVMGAPDIRFYAGAPLHSTKGYRIGTLCLIDSQPQSFSSKQRSMLKDLAATV 154

[17][TOP]
>UniRef100_A2VQK9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Burkholderia cenocepacia
           PC184 RepID=A2VQK9_9BURK
          Length = 335

 Score = 89.7 bits (221), Expect = 9e-17
 Identities = 49/121 (40%), Positives = 67/121 (55%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P ALV+L D+ R + +   G       P   SFC   + S +   MVI DAL D R
Sbjct: 53  LFDVPIALVSLVDENRQWFKSHAG-LDATQTPRDVSFCAHALLSGDT--MVIQDALNDDR 109

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G PG+RFY G PL A NG  +GTLC  D +PR  +A    +L +LA +  R 
Sbjct: 110 FHDNPLVTGTPGIRFYAGRPLTAPNGAPVGTLCLIDTRPRSLEADELALLGDLAHMTERE 169

Query: 362 L 364
           +
Sbjct: 170 I 170

[18][TOP]
>UniRef100_B9KK71 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides
           KD131 RepID=B9KK71_RHOSK
          Length = 336

 Score = 89.4 bits (220), Expect = 1e-16
 Identities = 52/140 (37%), Positives = 83/140 (59%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I+  P A+++L D  R++++  +G  +R + P   +FC   +A R  +++ I DA  D R
Sbjct: 38  IYAVPLAVMSLIDGDRLWVKSVQGGERR-EVPRCDTFCD--VAIRGKKVLQIVDAQSDPR 94

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           + +N  VRG PG+R Y G PL   +G+ IGTLC  D  PR++ +    VL NLA+L V H
Sbjct: 95  YRDNPYVRGEPGMRSYLGAPLTTPDGYNIGTLCVIDTIPRDYTSVDREVLANLAKLAVIH 154

Query: 362 LEKDIALQLRAHDNNSLAAA 421
           LE    L+L+A ++   +A+
Sbjct: 155 LE----LRLQATEDQQTSAS 170

[19][TOP]
>UniRef100_A3PL62 Diguanylate cyclase with GAF sensor n=2 Tax=Rhodobacter sphaeroides
           RepID=A3PL62_RHOS1
          Length = 336

 Score = 89.4 bits (220), Expect = 1e-16
 Identities = 52/140 (37%), Positives = 83/140 (59%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I+  P A+++L D  R++++  +G  +R + P   +FC   +A R  +++ I DA  D R
Sbjct: 38  IYAVPLAVMSLIDGDRLWVKSVQGGERR-EVPRCDTFCD--VAIRGKKVLQIVDAQSDPR 94

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           + +N  VRG PG+R Y G PL   +G+ IGTLC  D  PR++ +    VL NLA+L V H
Sbjct: 95  YRDNPYVRGEPGMRSYLGAPLTTPDGYNIGTLCVIDTIPRDYTSVDREVLANLAKLAVIH 154

Query: 362 LEKDIALQLRAHDNNSLAAA 421
           LE    L+L+A ++   +A+
Sbjct: 155 LE----LRLQATEDQQTSAS 170

[20][TOP]
>UniRef100_A1S6Z8 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella amazonensis
           SB2B RepID=A1S6Z8_SHEAM
          Length = 327

 Score = 89.4 bits (220), Expect = 1e-16
 Identities = 50/122 (40%), Positives = 68/122 (55%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P  L++L D  R + +   G   + +     SFCG  +   +  I VI DAL+D R
Sbjct: 41  LFDVPICLISLVDSDRQWFKSCIG-LSQSETRRDISFCGHAIMQAD--IFVIEDALEDLR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +RFY G PL  SNGHR+GTLC  D K R F+      L +L +LVV  
Sbjct: 98  FADNPLVTGEPHIRFYAGYPLTLSNGHRVGTLCIIDRKARRFEPEDYCDLEDLGKLVVSE 157

Query: 362 LE 367
           LE
Sbjct: 158 LE 159

[21][TOP]
>UniRef100_B2UI26 Diguanylate cyclase with GAF sensor n=2 Tax=Ralstonia pickettii
           RepID=B2UI26_RALPJ
          Length = 348

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 49/117 (41%), Positives = 69/117 (58%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+AP  LV+L D +R + +   G   R +     SFCG  +A   DQ++VIPD   D R
Sbjct: 41  VFDAPIVLVSLIDAQRQWFKSCIGLNVR-ETGRDISFCGHAVAE--DQMLVIPDTKADPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
           F +N +V G P +RFY G P+   +G+ +GTLC  D KPR FD +   +LN+LA  V
Sbjct: 98  FADNPLVTGAPHIRFYAGRPVRNLSGYAVGTLCVLDKKPRSFDQAERELLNDLASWV 154

[22][TOP]
>UniRef100_B0RTT3 Signaling protein n=3 Tax=Xanthomonas campestris pv. campestris
           RepID=B0RTT3_XANCB
          Length = 618

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
 Frame = +2

Query: 20  ALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEM 199
           ALV+L D+ R + +   G  +  + P + +FC   +  R+D ++VIPDAL D RFCNN +
Sbjct: 55  ALVSLVDEHRQWFKARVG-LEAPETPRKHAFCAHAL--RSDDVLVIPDALLDPRFCNNPL 111

Query: 200 VRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRHLE 367
           V G P +RFY G PL   +GH IGTLC     PR   DA + + L  L +L V  +E
Sbjct: 112 VLGAPHIRFYAGAPLKLRDGHTIGTLCVIGTSPRAGLDAEQRIQLEGLRDLAVLRVE 168

[23][TOP]
>UniRef100_UPI00016938B6 putative signal transduction protein n=1 Tax=Xanthomonas oryzae pv.
           oryzicola BLS256 RepID=UPI00016938B6
          Length = 582

 Score = 88.6 bits (218), Expect = 2e-16
 Identities = 44/119 (36%), Positives = 69/119 (57%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P ALV+L D+RR + +   G     + P   +FC    A + D +M +PDA  D RFC+N
Sbjct: 49  PIALVSLVDERRQWCKANIGLPGVSETPRELAFCAH--AIQGDAVMEVPDAPADPRFCDN 106

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEK 370
            +V   PG+R+Y G P++ S+G R+GT+C  D +PR  + ++   L  LA++    LE+
Sbjct: 107 ALVTDAPGIRYYAGAPIVLSDGVRVGTVCVIDQRPRALEPAQLQALQQLAKVAAEGLEQ 165

[24][TOP]
>UniRef100_Q3KE87 Putative GGDEF/GAF domain sensory box protein n=1 Tax=Pseudomonas
           fluorescens Pf0-1 RepID=Q3KE87_PSEPF
          Length = 321

 Score = 88.6 bits (218), Expect = 2e-16
 Identities = 49/137 (35%), Positives = 76/137 (55%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P ALV L D  R + +   G     + P   SFC   +    D++M++PDA +D R
Sbjct: 41  LFNVPIALVTLVDKERQWFKSCVG-LDTTETPRSVSFCAHAIL--RDELMLVPDAREDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +RFY G PL   +G+++GTLC  D KPR+ D     +L +LA +  + 
Sbjct: 98  FHDNPLVTGEPNIRFYAGYPLTVPSGNKMGTLCLIDTKPRDLDEEERALLRDLAGMAEQE 157

Query: 362 LEKDIALQLRAHDNNSL 412
           L   +A+Q+ + D  +L
Sbjct: 158 L---MAVQMASMDELTL 171

[25][TOP]
>UniRef100_B4E8Q7 Putative cyclic-di-GMP signaling protein n=1 Tax=Burkholderia
           cenocepacia J2315 RepID=B4E8Q7_BURCJ
          Length = 323

 Score = 88.2 bits (217), Expect = 3e-16
 Identities = 48/121 (39%), Positives = 66/121 (54%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P ALV+L D+ R + +   G       P   SFC   + + +   MVI DAL D R
Sbjct: 41  LFDVPIALVSLVDENRQWFKSRAG-LDATQTPRDVSFCAHALLAGDT--MVIQDALNDDR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G PG+RFY G PL A NG  IGTLC  D +PR  +     +L +LA +  R 
Sbjct: 98  FHDNPLVTGAPGIRFYAGRPLTAPNGAPIGTLCLIDTRPRSLEPDELALLGDLAHMTERE 157

Query: 362 L 364
           +
Sbjct: 158 I 158

[26][TOP]
>UniRef100_A7MPS7 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC
           BAA-894 RepID=A7MPS7_ENTS8
          Length = 323

 Score = 88.2 bits (217), Expect = 3e-16
 Identities = 46/117 (39%), Positives = 68/117 (58%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F AP AL++L D  +++    +GA  +   P R SFCG T+ S     ++I DAL D R
Sbjct: 41  LFNAPVALISLVDQEQLWFVSCDGAEPK-PIPRRVSFCGHTILSNAP--LIITDALSDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
           FC+N +V G P +RFY G P+   +G   G+LC  D +PR F  +   +L +LA +V
Sbjct: 98  FCDNPLVNGPPHIRFYAGCPVRLPDGATAGSLCIIDTEPRAFSEADAHLLRDLAAIV 154

[27][TOP]
>UniRef100_C5V279 Diguanylate cyclase with PAS/PAC and GAF sensors n=1
           Tax=Gallionella ferruginea ES-2 RepID=C5V279_9PROT
          Length = 462

 Score = 88.2 bits (217), Expect = 3e-16
 Identities = 43/122 (35%), Positives = 71/122 (58%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I   P A ++L D+ R + +   G  +  + P   +FC  T+  +  + M++P+ L+D R
Sbjct: 41  ICHTPFAAISLIDEHRQWFKAIVGV-EVSETPRDVAFCAHTILQQ--ETMIVPNTLEDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           FC+N  V GG  +RFY G PL+  +G+R+GTLC  D +PR+  A +   +  LA+ V+ H
Sbjct: 98  FCDNPFVEGGLNLRFYAGVPLVTESGYRLGTLCVFDQQPRQLSAEQLDAIKTLADSVMAH 157

Query: 362 LE 367
           L+
Sbjct: 158 LD 159

[28][TOP]
>UniRef100_A6F4L6 Sensor protein n=1 Tax=Marinobacter algicola DG893
           RepID=A6F4L6_9ALTE
          Length = 815

 Score = 88.2 bits (217), Expect = 3e-16
 Identities = 46/116 (39%), Positives = 69/116 (59%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
           F  P ALV+L DD+R + +  +G   R + P   SFCG  + S  D++ ++ D  +D+RF
Sbjct: 42  FGVPIALVSLVDDKRQWFKSCQGLEAR-ETPRDISFCGHAILS--DRLFIVEDTHEDSRF 98

Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
            +N +V G P +RFY G  L + +G+R+GTLC  D +PR  D  + V+L  LA  V
Sbjct: 99  ADNPLVTGPPHIRFYAGAQLHSHDGYRLGTLCIIDTRPRTLDHDQRVLLEELARCV 154

[29][TOP]
>UniRef100_UPI000182674C hypothetical protein ENTCAN_02317 n=1 Tax=Enterobacter cancerogenus
           ATCC 35316 RepID=UPI000182674C
          Length = 321

 Score = 87.8 bits (216), Expect = 3e-16
 Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDF-PWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           F+ P A+V L D+  + ++ A+G  K  D  P   SFCG T+    ++ +V+ D L+D R
Sbjct: 42  FQVPLAMVNLIDEHSLIVKSADG--KAPDVVPRHISFCGHTILG--EKPLVVGDMLQDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAEL 349
           F +N +V G P VRFY G PL   NG  +G+LC  D  PREF+A+   VL++L+ L
Sbjct: 98  FADNPLVAGEPNVRFYAGFPLRLRNGASVGSLCLIDYAPREFNAADLAVLSDLSAL 153

[30][TOP]
>UniRef100_A4WAF7 Diguanylate cyclase with GAF sensor n=1 Tax=Enterobacter sp. 638
           RepID=A4WAF7_ENT38
          Length = 321

 Score = 87.8 bits (216), Expect = 3e-16
 Identities = 50/116 (43%), Positives = 62/116 (53%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P A V L D+R       EGA   G  P   SFC  T+   ++  +V+ D  +D R
Sbjct: 41  LFNVPVATVNLIDERSQVAMSTEGAMAAG-LPRNVSFCAHTIL--DNATLVVSDTHRDDR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAEL 349
           F +N +V G PGVRFY G PL   NG  +GTLC  D  PRE  AS    LN+LA L
Sbjct: 98  FRDNPLVTGTPGVRFYAGVPLSLPNGTLVGTLCLLDYVPRELSASDMAALNDLAAL 153

[31][TOP]
>UniRef100_Q87WK3 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas
           syringae pv. tomato RepID=Q87WK3_PSESM
          Length = 607

 Score = 86.7 bits (213), Expect = 8e-16
 Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
           F+ P ALV++ D+ R + R   G   R + P   SFC +T+ S  D +  IPDA  D RF
Sbjct: 43  FQTPIALVSIVDEHRQWFRARVGLSAR-ETPRNVSFCAYTILS--DTLFEIPDATLDERF 99

Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRH 361
            NN +V G P +R+Y G PLI  +G  +G+LC  D KPRE     +  +L   A LV++ 
Sbjct: 100 MNNSLVTGHPDIRYYAGAPLITDDGLALGSLCVIDTKPREPMSEHQTQMLKRFASLVMKR 159

Query: 362 L 364
           +
Sbjct: 160 I 160

[32][TOP]
>UniRef100_Q167N3 Sensory box/GGDEF family protein, putative n=1 Tax=Roseobacter
           denitrificans OCh 114 RepID=Q167N3_ROSDO
          Length = 785

 Score = 86.7 bits (213), Expect = 8e-16
 Identities = 53/123 (43%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P  LV+L D  R + + A+   +  +     SFC  T A R + +MVIPDA KDAR
Sbjct: 90  VFSVPIVLVSLIDLNRQWFK-AKVGLELCETNLDVSFC--TYAVRQNDVMVIPDATKDAR 146

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358
           F NNE+VRG  G+RFY G PL  ++G  +GTLC  D  P  +F +    +L  LA LVV 
Sbjct: 147 FANNELVRGPDGIRFYAGAPLRTADGFVVGTLCLVDGVPHLDFGSEDRALLAKLAVLVVD 206

Query: 359 HLE 367
            +E
Sbjct: 207 LME 209

[33][TOP]
>UniRef100_C6DFX5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
           sensor(S) n=1 Tax=Pectobacterium carotovorum subsp.
           carotovorum PC1 RepID=C6DFX5_PECCP
          Length = 722

 Score = 86.7 bits (213), Expect = 8e-16
 Identities = 56/124 (45%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
 Frame = +2

Query: 2   IFEAPAALVALFD-DRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDA 178
           IF  P  LV+L + +R++F       F         SFC  T+  +  +IMV+PDALKDA
Sbjct: 41  IFNVPIVLVSLVEAERQLFAASVGVPFCETSRDI--SFCAHTILKK--KIMVVPDALKDA 96

Query: 179 RFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVV 355
           RF NN +V G P +RFY G PLI  +GH IGTLC  D+KPR     R    L +LA LV+
Sbjct: 97  RFRNNPLVVGVPYIRFYAGIPLITPSGHAIGTLCIIDLKPRSTFTKRDEHNLQDLASLVM 156

Query: 356 RHLE 367
             LE
Sbjct: 157 DKLE 160

[34][TOP]
>UniRef100_A1SVH2 Diguanylate cyclase with GAF sensor n=1 Tax=Psychromonas ingrahamii
           37 RepID=A1SVH2_PSYIN
          Length = 316

 Score = 86.7 bits (213), Expect = 8e-16
 Identities = 54/155 (34%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P ALV+L D+ R + +   G     + P   SFCG  +    ++I +IPD +KD R
Sbjct: 41  MFDVPIALVSLVDENRQWFKSCTG-INVSEIPRDISFCGHAILE--NEIFIIPDTIKDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PL   +G  +GTLC  D +PR  D      L +LAEL    
Sbjct: 98  FSDNPLVLNEPYIRFYAGCPLRYLDGSTLGTLCIIDTQPRVLDEEDLDALKDLAELAEHE 157

Query: 362 LEKDIALQLRAHDN-NSLAAAYGXLRRTLDCFDHC 463
           L   +A+QL   D    L+   G ++      D C
Sbjct: 158 L---MAVQLATQDELTKLSNRRGFIKLAQHGLDIC 189

[35][TOP]
>UniRef100_Q0EE59 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas
           syringae pv. actinidiae RepID=Q0EE59_PSESF
          Length = 607

 Score = 86.7 bits (213), Expect = 8e-16
 Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
           F+ P ALV++ D+ R + R   G   R + P   SFC +T+ S  D +  IPDA  D RF
Sbjct: 43  FQTPIALVSIVDEHRQWFRARVGLSAR-ETPRNVSFCAYTILS--DTLFEIPDATLDERF 99

Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRH 361
            NN +V G P +R+Y G PLI  +G  +G+LC  D KPRE     +  +L   A LV++ 
Sbjct: 100 MNNSLVTGHPDIRYYAGAPLITDDGLALGSLCVIDTKPREPMSEHQTQMLKRFASLVMKR 159

Query: 362 L 364
           +
Sbjct: 160 I 160

[36][TOP]
>UniRef100_B1G7L8 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia graminis
           C4D1M RepID=B1G7L8_9BURK
          Length = 326

 Score = 86.7 bits (213), Expect = 8e-16
 Identities = 52/137 (37%), Positives = 72/137 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P ALV+L D  R + +   G     +     SFC   +   +D I+ +PD L D R
Sbjct: 41  LFGVPIALVSLVDANRQWFKSCVG-LTASETSRDVSFCAHAIL--DDDILAVPDTLADER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PL   NG R+GTLC  DVKPRE D     +L +LA +  + 
Sbjct: 98  FHDNPLVTEAPNIRFYAGCPLTVPNGSRLGTLCLIDVKPRELDDEERELLRDLARMAEQE 157

Query: 362 LEKDIALQLRAHDNNSL 412
           L    A+QL   D+ +L
Sbjct: 158 L---AAVQLATLDDLTL 171

[37][TOP]
>UniRef100_Q39GU9 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia sp. 383
           RepID=Q39GU9_BURS3
          Length = 323

 Score = 86.3 bits (212), Expect = 1e-15
 Identities = 49/121 (40%), Positives = 64/121 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P ALV+L DD R + +   G           SFC   +   N   MVI DAL D R
Sbjct: 41  LFDVPIALVSLVDDDRQWFKSHAG-LDVTQTSRDVSFCSHALLEGNT--MVIQDALNDNR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G PG+RFY G PL A NG  IGTLC  D +PR  +     +L +LA +  R 
Sbjct: 98  FHDNPLVTGAPGIRFYAGRPLTAPNGAPIGTLCLIDTRPRSLEPDELALLGDLAHMTERE 157

Query: 362 L 364
           +
Sbjct: 158 I 158

[38][TOP]
>UniRef100_C4T4E6 Diguanylate cyclase (GGDEF domain) n=1 Tax=Yersinia intermedia ATCC
           29909 RepID=C4T4E6_YERIN
          Length = 330

 Score = 86.3 bits (212), Expect = 1e-15
 Identities = 48/133 (36%), Positives = 75/133 (56%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P AL+++ D  R + +   G     + P   SFCG  +    D I+++P+AL D R
Sbjct: 43  LFDVPIALISIVDVNRQWFKSHPGLVT-SETPRDISFCGHAILG--DDILLVPNALDDIR 99

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   PG+RFY G PL+  NG ++GTLC  D+KPR  D     +L +LA++  + 
Sbjct: 100 FSDNPLVTDDPGIRFYAGCPLVVPNGSKLGTLCLIDLKPRILDEYDQQLLCDLAKMAEQE 159

Query: 362 LEKDIALQLRAHD 400
           +    A+QL   D
Sbjct: 160 I---AAVQLATID 169

[39][TOP]
>UniRef100_A4JE43 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia
           vietnamiensis G4 RepID=A4JE43_BURVG
          Length = 323

 Score = 85.9 bits (211), Expect = 1e-15
 Identities = 47/121 (38%), Positives = 66/121 (54%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P A+V+L D+ R + +   G           SFC   + +  D  MV+ DAL D R
Sbjct: 41  LFDVPIAVVSLVDEDRQWFKSHPG-LDATQTSRDVSFCAHALLA--DDTMVVKDALNDDR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G PG+RFY G PL A NG  +GTLC  D +PRE  A    +L +LA +  R 
Sbjct: 98  FHDNPLVTGQPGIRFYAGRPLAAPNGAPVGTLCLIDTRPRELCADELALLGDLAHMTERE 157

Query: 362 L 364
           +
Sbjct: 158 I 158

[40][TOP]
>UniRef100_Q3BUK7 Putative phosphodiesterase n=1 Tax=Xanthomonas campestris pv.
           vesicatoria str. 85-10 RepID=Q3BUK7_XANC5
          Length = 666

 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
 Frame = +2

Query: 8   EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
           +A  ALV+L D+ R + +   G   R + P   +FC    A R+D++MV+PDA  D RFC
Sbjct: 99  DAEIALVSLVDEHRQWFKARIGLEAR-ETPRSQAFCAH--AIRSDEVMVVPDARLDPRFC 155

Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRHL 364
           +N +V G P +RFY G PL   +GH IGTLC     PR   DA+    L  L +L V  +
Sbjct: 156 DNPLVMGPPFIRFYAGAPLKLRDGHSIGTLCVIGTSPRPGLDAAAITQLEGLRDLAVLRV 215

Query: 365 E 367
           E
Sbjct: 216 E 216

[41][TOP]
>UniRef100_A9WA16 Diguanylate cyclase n=2 Tax=Chloroflexus RepID=A9WA16_CHLAA
          Length = 370

 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 47/122 (38%), Positives = 70/122 (57%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I + P ALV L D  R +     G F  G+     +FC +T+ +  D +MV+PDA +D R
Sbjct: 53  ICQTPIALVNLVDRHRQWSMARLG-FSDGEVERTLTFCAFTI-NDPDHVMVVPDATRDPR 110

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N  VR  P +RFY G PL+ S+G+ +GT+C  D++PR+    +  +L  L+  VV  
Sbjct: 111 FASNPYVRREPYIRFYAGAPLVTSHGYALGTVCVIDLQPRQLSPEQLEMLRLLSRQVVTQ 170

Query: 362 LE 367
           LE
Sbjct: 171 LE 172

[42][TOP]
>UniRef100_Q2BQ10 Diguanylate cyclase, putative n=1 Tax=Neptuniibacter caesariensis
           RepID=Q2BQ10_9GAMM
          Length = 327

 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 51/133 (38%), Positives = 71/133 (53%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF+ P ALV+L D  R + +   G     +     SFCG  +   +DQ+ VI +AL+D R
Sbjct: 47  IFDVPIALVSLVDTNRQWFKSCMG-LDASETGRDISFCGHAIL--DDQVFVINNALQDPR 103

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PL    G R+GTLC  D KPR+F     + L +LA +  + 
Sbjct: 104 FADNPLVTDAPHIRFYAGCPLRDVGGQRLGTLCLIDTKPRDFSHDDVIALKDLAAMAEQE 163

Query: 362 LEKDIALQLRAHD 400
           L    A+QL   D
Sbjct: 164 L---AAVQLATTD 173

[43][TOP]
>UniRef100_A4BK94 Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain
           n=1 Tax=Reinekea blandensis MED297 RepID=A4BK94_9GAMM
          Length = 301

 Score = 85.5 bits (210), Expect = 2e-15
 Identities = 56/154 (36%), Positives = 82/154 (53%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
           F  P ALV+L D+ R + +   G   R       SFCG  + S  D ++VI + L D+RF
Sbjct: 42  FHVPIALVSLVDENRQWFKSCFGLDVRHT-DRNISFCGHAIHS--DALLVIENTLIDSRF 98

Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364
            +N +V G P +RFY G PL A  G RIGTLC  D KPR+ D S    L  LA++V + L
Sbjct: 99  HDNPLVIGNPHIRFYAGAPLHAPEGERIGTLCLIDRKPRQLDHSERKQLRQLADIVEQEL 158

Query: 365 EKDIALQLRAHDNNSLAAAYGXLRRTLDCFDHCV 466
              ++++  + D+ +        +  LD  D+C+
Sbjct: 159 ---VSVRSSSMDSET---ELSNRKGLLDLADYCL 186

[44][TOP]
>UniRef100_UPI0001A446DD putative signaling protein n=1 Tax=Pectobacterium carotovorum
           subsp. brasiliensis PBR1692 RepID=UPI0001A446DD
          Length = 722

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 55/124 (44%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
 Frame = +2

Query: 2   IFEAPAALVALFD-DRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDA 178
           IF  P  LV+L + +R++F       F   + P   SFC  T+  +  +IMV+ DALKDA
Sbjct: 41  IFSVPIVLVSLVETERQLFAASVGVPFC--ETPRDISFCAHTILKK--KIMVVHDALKDA 96

Query: 179 RFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVV 355
           RF NN +V G P +RFY G PL+  +GH IGTLC  D+KPR     R    L++LA LV+
Sbjct: 97  RFKNNPLVVGVPYIRFYAGIPLMTPSGHAIGTLCIIDLKPRTTFTKRDEHNLHDLASLVM 156

Query: 356 RHLE 367
             LE
Sbjct: 157 DKLE 160

[45][TOP]
>UniRef100_Q1YRB1 Diguanylate cyclase, putative n=1 Tax=gamma proteobacterium
           HTCC2207 RepID=Q1YRB1_9GAMM
          Length = 319

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 52/133 (39%), Positives = 73/133 (54%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P ALV+L D  R + +   G     + P   SFCG ++    +++ +IPDA  D R
Sbjct: 41  LFDVPIALVSLVDKDRQWFKSRIG-LPVSETPRDISFCGHSILG--EEVFIIPDASSDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PL A NG +IGTLC  D KPR+F  +    L +LA +  + 
Sbjct: 98  FQDNPLVIDKPNIRFYAGCPLRALNGTQIGTLCIIDDKPRDFSEADLSALTDLAAMAEQE 157

Query: 362 LEKDIALQLRAHD 400
           L    ALQL   D
Sbjct: 158 L---AALQLAVLD 167

[46][TOP]
>UniRef100_C9Y4F4 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis
           RepID=C9Y4F4_9ENTR
          Length = 329

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 44/117 (37%), Positives = 68/117 (58%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F AP AL++L D  +++    +G   +   P   SFCG T+   N+  ++I DAL D R
Sbjct: 47  LFNAPVALISLVDQEQLWFASCDGVEPK-PIPRNVSFCGHTIL--NNAPLIITDALSDER 103

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
           F +N +V G P +RFY G P+   +G   G+LC  D +PREF  +  ++L +LA +V
Sbjct: 104 FHDNALVNGPPHIRFYAGCPVQLPDGATAGSLCIIDTEPREFSEADTLLLRDLAAIV 160

[47][TOP]
>UniRef100_UPI00018735BF GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas
           syringae pv. tomato T1 RepID=UPI00018735BF
          Length = 607

 Score = 84.7 bits (208), Expect = 3e-15
 Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
           F+ P ALV++ D+ R + R   G   R + P   SFC +T+ S    +  IPDA  D RF
Sbjct: 43  FQTPIALVSIVDEHRQWFRARVGLSAR-ETPRNVSFCAYTILSHT--LFEIPDATLDERF 99

Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRH 361
            NN +V G P +R+Y G PLI  +G  +G+LC  D KPRE     +  +L   A LV++ 
Sbjct: 100 MNNSLVTGHPDIRYYAGAPLITDDGLALGSLCVIDTKPREPMSEHQTQMLKRFASLVMKR 159

Query: 362 L 364
           +
Sbjct: 160 I 160

[48][TOP]
>UniRef100_Q48E25 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas
           syringae pv. phaseolicola 1448A RepID=Q48E25_PSE14
          Length = 620

 Score = 84.7 bits (208), Expect = 3e-15
 Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
           F+ P AL+++ D+ R + R   G     + P   SFC +T+ S  D +  IPDA  D RF
Sbjct: 56  FQTPIALISIVDEHRQWFRARVG-LNAQETPRNVSFCAYTILS--DSLFEIPDATLDDRF 112

Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRH 361
            NN +V G P +R+Y G PLI  +G  +G+LC  D KPRE     +  +L   A LV++ 
Sbjct: 113 MNNSLVTGHPDIRYYAGAPLITDDGIALGSLCVIDTKPREPMSEHQMQMLKRFASLVMKR 172

Query: 362 L 364
           +
Sbjct: 173 I 173

[49][TOP]
>UniRef100_B8HS57 Sensor protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HS57_CYAP4
          Length = 1965

 Score = 84.7 bits (208), Expect = 3e-15
 Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P  LV+L D+ R + +   G F + +     + C +T+   +D + V+PDA +D R
Sbjct: 50  LFGVPIVLVSLVDETRAWFKSCYG-FNQQEVARDATICSFTLL--HDDVFVVPDARQDDR 106

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358
           F  N +V+  PG+RFY G PL+ ++G  +GTLC  D +PR+   A +   L +LA +V+ 
Sbjct: 107 FACNPLVKAEPGLRFYAGAPLLTADGFNLGTLCLLDTQPRDSLTAEQRATLTDLAAMVMD 166

Query: 359 HLEKDIA 379
            LE  +A
Sbjct: 167 ELELRLA 173

[50][TOP]
>UniRef100_A4SI79 GGDEF domain protein n=1 Tax=Aeromonas salmonicida subsp.
           salmonicida A449 RepID=A4SI79_AERS4
          Length = 318

 Score = 84.7 bits (208), Expect = 3e-15
 Identities = 50/133 (37%), Positives = 74/133 (55%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P +LV+L D+ R + +   G     + P   SFCG  +    D + V+ DA +D R
Sbjct: 41  MFDVPISLVSLVDEDRQWFKSCCG-LPVPETPRDISFCGHAILG--DDLFVVEDATRDLR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +RFY G+PL    G+++GTLC  D KPR  D  +  +L +LA +V R 
Sbjct: 98  FADNPLVSGDPHIRFYAGSPLQIGEGYKLGTLCIIDRKPRLLDERQRDLLTDLAGMVERE 157

Query: 362 LEKDIALQLRAHD 400
           L    A+QL   D
Sbjct: 158 L---AAIQLATMD 167

[51][TOP]
>UniRef100_UPI0001AF4C5A GAF domain/GGDEF domain/EAL domain-containing protein n=1
           Tax=Pseudomonas syringae pv. oryzae str. 1_6
           RepID=UPI0001AF4C5A
          Length = 607

 Score = 84.3 bits (207), Expect = 4e-15
 Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
           F+AP +LV++ D+ R + R   G  K  + P   SFC +T+ S  D    +PDA  D RF
Sbjct: 43  FQAPISLVSIVDENRQWFRARVG-LKPRETPRNVSFCAYTILS--DVPFEVPDATIDERF 99

Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRH 361
            NN +V G P +R+Y G PLI  +G  +G+LC  D KPRE     + ++L   A LV++ 
Sbjct: 100 VNNGLVTGHPDIRYYAGAPLITDDGLALGSLCVIDTKPREPMSEHQMLMLKRFASLVMKR 159

Query: 362 L 364
           +
Sbjct: 160 I 160

[52][TOP]
>UniRef100_Q8PLK2 Putative uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv.
           citri RepID=Q8PLK2_XANAC
          Length = 618

 Score = 84.3 bits (207), Expect = 4e-15
 Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
 Frame = +2

Query: 8   EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
           +A  A+V+L D+ R + +   G   R + P   +FC    A R+D++MV+PDA  D RFC
Sbjct: 51  DAEIAVVSLVDEHRQWFKARIGLEAR-ETPRSQAFCAH--AIRSDEVMVVPDAQLDPRFC 107

Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRHL 364
           +N +V G P +RFY G PL   +GHRIGTLC     PR   D +    L  L +L V  +
Sbjct: 108 DNPLVLGPPFIRFYAGAPLKLRDGHRIGTLCVIGTSPRPGLDQAAITQLEGLRDLAVLRV 167

Query: 365 E 367
           E
Sbjct: 168 E 168

[53][TOP]
>UniRef100_Q4ZR61 PAS:GGDEF n=1 Tax=Pseudomonas syringae pv. syringae B728a
           RepID=Q4ZR61_PSEU2
          Length = 732

 Score = 84.3 bits (207), Expect = 4e-15
 Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF+ P  L++L    R F +   G     +     SFC + +  RN  + ++PDAL+D R
Sbjct: 41  IFDLPIVLISLVHRDRQFFKARVG-LDVCETGRDVSFCNFALMGRN--VFLVPDALQDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358
           F +N +V G P +RFY G PLI ++GH +G+LC  D KPRE F     +VL +LA +++ 
Sbjct: 98  FSSNALVVGAPHIRFYAGAPLITASGHVLGSLCLIDNKPRETFSERDQLVLQDLAVMIIE 157

Query: 359 HLE 367
            +E
Sbjct: 158 RME 160

[54][TOP]
>UniRef100_Q48GS4 Sensory box/GGDEF family protein n=1 Tax=Pseudomonas syringae pv.
           phaseolicola 1448A RepID=Q48GS4_PSE14
          Length = 732

 Score = 84.3 bits (207), Expect = 4e-15
 Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF+ P  L++L    R F +   G     +     SFC + +  RN  + ++PDAL+D R
Sbjct: 41  IFDVPIVLISLVHRDRQFFKARIG-LDVCETGRDVSFCNFALMGRN--VFLVPDALQDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358
           F +N +V G P +RFY G PLI ++GH +G+LC  D KPRE F     +VL +LA +V+ 
Sbjct: 98  FSSNALVVGAPYIRFYAGAPLITASGHVLGSLCLIDNKPRETFSQRDQLVLQDLAVIVIE 157

Query: 359 HLE 367
            +E
Sbjct: 158 RME 160

[55][TOP]
>UniRef100_B8G5J8 Diguanylate cyclase with GAF sensor n=1 Tax=Chloroflexus aggregans
           DSM 9485 RepID=B8G5J8_CHLAD
          Length = 367

 Score = 84.3 bits (207), Expect = 4e-15
 Identities = 47/122 (38%), Positives = 67/122 (54%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I + P ALV L D  R + +   G F   +   + +FC +T+ +  D + V+PDA  D R
Sbjct: 51  ICQTPMALVNLIDRDRQWSKARLG-FTDSEVDRKLAFCSYTI-NYPDDVFVVPDATCDER 108

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N  V G P +RFY G PL+  NG+ +GT+C  DV+P      +  +L  LA  VVR 
Sbjct: 109 FAHNPFVCGDPYIRFYAGAPLVTPNGYALGTVCVVDVRPHRLTPEQIEMLRVLARQVVRQ 168

Query: 362 LE 367
           LE
Sbjct: 169 LE 170

[56][TOP]
>UniRef100_A3JB69 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax=Marinobacter sp.
           ELB17 RepID=A3JB69_9ALTE
          Length = 806

 Score = 84.3 bits (207), Expect = 4e-15
 Identities = 46/122 (37%), Positives = 65/122 (53%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
           +  P AL +L D++R + +   G   + + P   +FC    A R D + V+ DA KD RF
Sbjct: 53  YNTPIALFSLLDEKRQWFKSKRGLDLK-ETPRSIAFCDH--AIRQDSVFVVADASKDERF 109

Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364
           CNN MV G   +RFY G P+    G ++GTLC  D KPR+       VL  LA L+   +
Sbjct: 110 CNNPMVTGESHIRFYAGMPVREPGGFKMGTLCIMDHKPRDIPEHELDVLRTLASLIEDEV 169

Query: 365 EK 370
           E+
Sbjct: 170 ER 171

[57][TOP]
>UniRef100_B7FU53 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP
           1055/1 RepID=B7FU53_PHATR
          Length = 153

 Score = 84.0 bits (206), Expect = 5e-15
 Identities = 46/121 (38%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF  P ALV+L D  R +     G     + P +++FC   + ++++ ++V+PDA KD R
Sbjct: 35  IFNVPIALVSLVDLGRQWFMSNRGLGSVRETPRKYAFCAHAILNKHN-LLVVPDASKDFR 93

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE---FDASRCVVLNNLAELV 352
           F  N +V G P +RFY G+PL++  G+++GTLC  D K R     DA +   L +LA++V
Sbjct: 94  FETNPLVTGPPNIRFYAGSPLVSPEGYKLGTLCIIDSKVRPEGLLDAEK-ATLRDLADMV 152

Query: 353 V 355
           V
Sbjct: 153 V 153

[58][TOP]
>UniRef100_Q4UNM5 Putative uncharacterized protein n=1 Tax=Xanthomonas campestris pv.
           campestris str. 8004 RepID=Q4UNM5_XANC8
          Length = 582

 Score = 83.6 bits (205), Expect = 6e-15
 Identities = 45/133 (33%), Positives = 71/133 (53%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P ALV+L D+ R + +   G       P   +FC   +   +D +M +P+A  D RF  N
Sbjct: 49  PIALVSLVDEHRQWWKANVGLPGVSQTPRELAFCAHAIL--DDAVMEVPNASDDPRFSGN 106

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373
           E+V   PG+R+Y G P++ S+G R+GT+C  D +PR+   ++   L +LA +    LE+ 
Sbjct: 107 ELVTDAPGIRYYAGAPIVLSDGLRMGTVCVIDQRPRQLQPAQLEALRHLARVAAEGLEQR 166

Query: 374 IALQLRAHDNNSL 412
             +  RA  N  L
Sbjct: 167 RLMLERAETNAQL 179

[59][TOP]
>UniRef100_B0RMK5 Putative signal transduction protein n=2 Tax=Xanthomonas campestris
           pv. campestris RepID=B0RMK5_XANCB
          Length = 582

 Score = 83.6 bits (205), Expect = 6e-15
 Identities = 45/133 (33%), Positives = 71/133 (53%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P ALV+L D+ R + +   G       P   +FC   +   +D +M +P+A  D RF  N
Sbjct: 49  PIALVSLVDEHRQWWKANVGLPGVSQTPRELAFCAHAIL--DDAVMEVPNASDDPRFSGN 106

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373
           E+V   PG+R+Y G P++ S+G R+GT+C  D +PR+   ++   L +LA +    LE+ 
Sbjct: 107 ELVTDAPGIRYYAGAPIVLSDGLRMGTVCVIDQRPRQLQPAQLEALRHLARVAAEGLEQR 166

Query: 374 IALQLRAHDNNSL 412
             +  RA  N  L
Sbjct: 167 RLMLERAETNAQL 179

[60][TOP]
>UniRef100_A9BX42 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1
           Tax=Delftia acidovorans SPH-1 RepID=A9BX42_DELAS
          Length = 594

 Score = 83.6 bits (205), Expect = 6e-15
 Identities = 46/122 (37%), Positives = 66/122 (54%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F AP A++ + D+ R + +   G    G      +FC  T+  RN+ IMVIPD   D+R
Sbjct: 41  MFMAPIAIITVLDEHRQWFKAPVGVDMDGSLRTD-AFCDHTI--RNEGIMVIPDTHLDSR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F  N +V   P +RFY G PLI  +GH IG+LC  D +PR F   +   L  +A +V   
Sbjct: 98  FSENPLVTHKPNIRFYAGVPLIMESGHAIGSLCIIDTRPRTFSEEQGQQLQAMAAIVQAQ 157

Query: 362 LE 367
           L+
Sbjct: 158 LQ 159

[61][TOP]
>UniRef100_A3VSH9 FOG: GGDEF domain protein n=1 Tax=Parvularcula bermudensis HTCC2503
           RepID=A3VSH9_9PROT
          Length = 388

 Score = 83.6 bits (205), Expect = 6e-15
 Identities = 47/120 (39%), Positives = 68/120 (56%)
 Frame = +2

Query: 8   EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
           + P ALV+L DD R + +   G     + P   +FC    A +ND  +V+ +AL+D RF 
Sbjct: 41  DVPVALVSLVDDHRQWFKARLG-IDDPETPREIAFCAH--AIQNDDPLVVENALEDPRFR 97

Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
           +N +V G   VRFY G P+I S G+R+GT+C  D  PR+    +  +L +LA L  R LE
Sbjct: 98  SNPLVTGDTHVRFYAGAPIILSGGYRLGTVCVLDTNPRQISEGQRQILVDLAGLAARELE 157

[62][TOP]
>UniRef100_Q98BW5 Mlr5400 protein n=1 Tax=Mesorhizobium loti RepID=Q98BW5_RHILO
          Length = 416

 Score = 83.2 bits (204), Expect = 8e-15
 Identities = 49/146 (33%), Positives = 78/146 (53%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P A+V++ D  R + +  EG     +   + +FC +T+    ++ +++ DA KD R
Sbjct: 50  VFDVPIAIVSVIDGHRQWYKACEG-LAINEVERKATFCQYTILQ--EEPLIVTDATKDPR 106

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N MVR  P +RFY G PL + +GH IG++C     PREF      +L + A+L +  
Sbjct: 107 FADNPMVRNDPHIRFYAGVPLRSRDGHNIGSVCAIGYIPREFSDRDIAILQDFADLAMDE 166

Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRR 439
           LE      LR H ++   A  G L R
Sbjct: 167 LE------LRQHASSD--AVTGVLSR 184

[63][TOP]
>UniRef100_Q8DJE3 Sensor protein n=1 Tax=Thermosynechococcus elongatus BP-1
           RepID=Q8DJE3_THEEB
          Length = 1353

 Score = 83.2 bits (204), Expect = 8e-15
 Identities = 45/122 (36%), Positives = 66/122 (54%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I E P AL++L D +R + +   G     + P   +FC   +    DQ++++PDA  D R
Sbjct: 41  ICETPIALISLVDRQRQWFKSKVG-IDACETPRNVAFCAHVILQ--DQLVIVPDARLDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N  V G P +RFY G PL+   G+ IGTLC  D +PR+ +  +   L  LA  V+  
Sbjct: 98  FADNPFVTGPPYIRFYAGMPLVTPQGYGIGTLCVVDYQPRQLNPVQQQTLRTLARQVINE 157

Query: 362 LE 367
           LE
Sbjct: 158 LE 159

[64][TOP]
>UniRef100_Q7U978 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 8102
           RepID=Q7U978_SYNPX
          Length = 239

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 58/163 (35%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +   P AL++L D  R + +   G  +  + P  WSFC   + S +   ++IPDAL D R
Sbjct: 41  VCSTPIALLSLIDTDRQWFKSKVGV-EIQETPRDWSFCAHAIHSSDP--LIIPDALMDDR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +R Y G PL  S   R+GTLC  D  PR+ +   C V+  LA  VV  
Sbjct: 98  FRDNPLVCGDPNIRLYAGFPLENSKALRVGTLCVIDRVPRQLNDKECGVMKALARQVVSF 157

Query: 362 LE---KDIAL--QLRAH-DNNSLAAAYGXLRRTLDCFDHCVAL 472
           LE   K I L     AH +NN + +     R+  D   H + L
Sbjct: 158 LELRKKSINLIESFCAHTENNRMISTCSYCRKAQDKNGHWMHL 200

[65][TOP]
>UniRef100_Q07Y18 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella
           frigidimarina NCIMB 400 RepID=Q07Y18_SHEFN
          Length = 327

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 45/121 (37%), Positives = 63/121 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F    ++V+L D  R + +  +G     +     SFCG   A     ++V+PDALKD R
Sbjct: 41  LFSVSISVVSLIDSERQWFKSVQG-LDICETQRDISFCGH--AINQQHVLVVPDALKDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PL   NG R+GTLC  D KPR F       L +L ++V   
Sbjct: 98  FADNPLVLAAPNIRFYAGYPLTMPNGVRVGTLCIIDDKPRSFSKDDEAALEDLGKIVAEE 157

Query: 362 L 364
           L
Sbjct: 158 L 158

[66][TOP]
>UniRef100_C6XJK2 Sensor protein n=1 Tax=Hirschia baltica ATCC 49814
           RepID=C6XJK2_HIRBI
          Length = 814

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 44/117 (37%), Positives = 65/117 (55%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P ALV+L D+ R + +   G     +     SFC   + S N  +MV+ +A++D +
Sbjct: 38  MFDVPIALVSLVDENRQWFKSNCGLDGVTETARDISFCQHAIKSTN--VMVVENAIEDEK 95

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
           +  N +V G P +RFY G PLI   GH +GTLC  D KPR+F A    +L  LA  +
Sbjct: 96  YDQNPLVLGEPSIRFYAGAPLITEEGHALGTLCLIDRKPRKFSAQEQALLVRLATTI 152

[67][TOP]
>UniRef100_B2SZU2 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia
           phytofirmans PsJN RepID=B2SZU2_BURPP
          Length = 326

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 49/137 (35%), Positives = 72/137 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P ALV+L D  R + +   G  +  +     SFC   +    D+I+++PD L D R
Sbjct: 41  LFGVPIALVSLVDADRQWFKSCVG-LEASETSRDVSFCAHAILG--DEILMVPDTLADER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PL   NG ++GTLC  D KPR  D     +L +LA +  + 
Sbjct: 98  FHDNPLVTDNPSIRFYAGCPLTVPNGSKLGTLCLIDTKPRGLDEEERQLLRDLARMAEQE 157

Query: 362 LEKDIALQLRAHDNNSL 412
           L    A+QL   D+ +L
Sbjct: 158 L---AAVQLATLDDLTL 171

[68][TOP]
>UniRef100_A1TRS2 Diguanylate phosphodiesterase with GAF sensor n=1 Tax=Acidovorax
           citrulli AAC00-1 RepID=A1TRS2_ACIAC
          Length = 595

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 48/126 (38%), Positives = 71/126 (56%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P ALV+L D  R + +   G   R +     +FC  T+  R  ++MV+ DAL+D R
Sbjct: 39  LFDVPIALVSLVDADRQWFKSQIGLPVR-ETCREDAFCDHTI--RTSEVMVVEDALQDPR 95

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F  N +V+G P +RFY G PLI    H +G+LC  D  PR FD ++   L +LA LV+  
Sbjct: 96  FAANPLVQGPPHIRFYAGAPLILRGHHHLGSLCLIDSVPRAFDTAQQRQLADLAALVMAQ 155

Query: 362 LEKDIA 379
           ++   A
Sbjct: 156 IDLQCA 161

[69][TOP]
>UniRef100_C9NSQ2 GGDEF domain protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450
           RepID=C9NSQ2_9VIBR
          Length = 319

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 48/129 (37%), Positives = 70/129 (54%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P A+V+L D+ R + +   G   R +     SFCG  +   +D   +I DA KD R
Sbjct: 41  LFDVPIAVVSLVDNHRQWFKSCIGLPVR-ETARNVSFCGHVI--NDDGPFIINDATKDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +RFY G PL+  N  ++GTLC  D KPRE    +   L +LA++  + 
Sbjct: 98  FLDNPLVMGEPFIRFYAGVPLVYHNQSKLGTLCIIDTKPRELTMQQMADLVDLAKVAEQE 157

Query: 362 LEKDIALQL 388
           LE  I   L
Sbjct: 158 LEATIQATL 166

[70][TOP]
>UniRef100_B8EE24 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella baltica
           OS223 RepID=B8EE24_SHEB2
          Length = 323

 Score = 82.4 bits (202), Expect = 1e-14
 Identities = 47/121 (38%), Positives = 63/121 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF  P  +V L D  R + +  +G  +  + P   SFCG   A   D I ++ DALKD R
Sbjct: 41  IFSLPICVVTLVDAERQWFKSRQG-LEVTETPREISFCGH--AINQDDIFIVNDALKDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PL     +R+GTLC    +PREF A     L +L E+V   
Sbjct: 98  FSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPREFTAEDIETLTDLGEMVEAE 157

Query: 362 L 364
           L
Sbjct: 158 L 158

[71][TOP]
>UniRef100_B4RWH1 Sensor protein n=1 Tax=Alteromonas macleodii 'Deep ecotype'
           RepID=B4RWH1_ALTMD
          Length = 542

 Score = 82.4 bits (202), Expect = 1e-14
 Identities = 47/122 (38%), Positives = 67/122 (54%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I + P AL++L D  R + +   G     +     +FC  + A   D +  IP+A  D R
Sbjct: 41  ICDTPIALISLIDPDRQWFKSRVG-LDAEETSREIAFC--SHAILQDDVFEIPNASLDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +RFY G PL++ +GH IGTLC  D KPR+   S+   L  L++ VV H
Sbjct: 98  FHDNPLVTGAPDIRFYAGAPLVSPSGHAIGTLCTIDRKPRKLTESQKTSLQTLSKSVVAH 157

Query: 362 LE 367
           LE
Sbjct: 158 LE 159

[72][TOP]
>UniRef100_A5GSN2 GAF domain protein n=1 Tax=Synechococcus sp. RCC307
           RepID=A5GSN2_SYNR3
          Length = 238

 Score = 82.4 bits (202), Expect = 1e-14
 Identities = 46/118 (38%), Positives = 65/118 (55%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P AL++L  D + + +   G   R + P  WSFC   +A  + + M+I DAL D RF +N
Sbjct: 48  PIALMSLVSDEKQWFKSTVGLEAR-ETPRDWSFCAHAIA--DSEPMIIEDALNDTRFRHN 104

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
            +V G P +R Y G PL     HR+GTLC  D KP     ++ +V+ +LA  VV  LE
Sbjct: 105 PLVSGDPNIRLYAGFPLETPAEHRLGTLCVIDRKPGALSDAQLIVMKSLARQVVTLLE 162

[73][TOP]
>UniRef100_A3D858 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella baltica
           OS155 RepID=A3D858_SHEB5
          Length = 323

 Score = 82.4 bits (202), Expect = 1e-14
 Identities = 47/121 (38%), Positives = 63/121 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF  P  +V L D  R + +  +G  +  + P   SFCG   A   D I ++ DALKD R
Sbjct: 41  IFSLPICVVTLVDAERQWFKSRQG-LEVTETPREISFCGH--AINQDDIFIVNDALKDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PL     +R+GTLC    +PREF A     L +L E+V   
Sbjct: 98  FSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPREFTAEDIETLTDLGEMVEAE 157

Query: 362 L 364
           L
Sbjct: 158 L 158

[74][TOP]
>UniRef100_O52937 Sensor protein n=1 Tax=Calothrix viguieri RepID=O52937_9CYAN
          Length = 744

 Score = 82.4 bits (202), Expect = 1e-14
 Identities = 47/138 (34%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P  LV+L D+ R + + + G F+  +     + C + + S  D+++VIPD  +D+R
Sbjct: 50  LFNVPITLVSLVDESRGWFKSSYG-FEMREVRRDTTICSFALLS--DEVLVIPDTREDSR 106

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358
              N  V+  PG+RFY G PL+  +G  +GTLC  D KPR+     +  VL++LA +V+ 
Sbjct: 107 LVCNPFVQNEPGLRFYAGAPLLTQDGFNLGTLCLLDTKPRDGLSDEQKSVLSDLAAMVMD 166

Query: 359 HLEKDIALQLRAHDNNSL 412
            LE  +A +  A  + +L
Sbjct: 167 ELELRLAARKVAQMDTAL 184

[75][TOP]
>UniRef100_B7S3A7 Sensor protein n=1 Tax=marine gamma proteobacterium HTCC2148
           RepID=B7S3A7_9GAMM
          Length = 552

 Score = 82.4 bits (202), Expect = 1e-14
 Identities = 50/128 (39%), Positives = 67/128 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           + E P ALV+L D  R + +   G  +  D     SFCG  +    D+I V+ DALKD+R
Sbjct: 41  VCETPIALVSLVDKHRQWFKSRAG-LEATDTHRDLSFCGHAIL--RDEIFVVEDALKDSR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F NN +V   P +RFY G PL    G  IGTLC  D  PR+   ++   L  L+  V+  
Sbjct: 98  FINNPLVLDHPNIRFYAGAPLKTPAGENIGTLCVIDTIPRKLTEAQKNSLVALSRQVIAQ 157

Query: 362 LEKDIALQ 385
           +E   ALQ
Sbjct: 158 IELRFALQ 165

[76][TOP]
>UniRef100_UPI0001694826 hypothetical protein Xoryp_10570 n=1 Tax=Xanthomonas oryzae pv.
           oryzicola BLS256 RepID=UPI0001694826
          Length = 618

 Score = 82.0 bits (201), Expect = 2e-14
 Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
 Frame = +2

Query: 20  ALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEM 199
           ALV+L D+ R + +   G  +R + P   +FC  T A R+D++MV+ DA  D R+C+N +
Sbjct: 55  ALVSLVDEHRQWFKARIGLEER-ETPRSQAFC--THAIRSDEVMVVLDARLDPRWCDNPL 111

Query: 200 VRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRHLE 367
           V G P +RFY G PL   +GH IGTLC     PRE  DA+    L  L +L V  +E
Sbjct: 112 VLGPPFIRFYVGAPLKLRDGHSIGTLCAIGTSPREGLDAAAITQLEGLRDLAVLRVE 168

[77][TOP]
>UniRef100_Q6F7V1 Sensor protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6F7V1_ACIAD
          Length = 419

 Score = 82.0 bits (201), Expect = 2e-14
 Identities = 44/122 (36%), Positives = 68/122 (55%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I +AP ++++L D+ R + + + G   RG+   ++S C   +  +  +I V+ D L D R
Sbjct: 41  ICDAPVSIISLIDETRSWFKSSHGV-PRGEVDRKYSICSHAILQK--EIFVVEDTLLDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V+G   VRFY G PL  S+G  +GTLC  D KPR     +   L+ LA  VV+ 
Sbjct: 98  FHDNPIVQGELAVRFYAGAPLTTSDGFNLGTLCLVDSKPRTLSEDQYKALSVLAVQVVQQ 157

Query: 362 LE 367
            E
Sbjct: 158 FE 159

[78][TOP]
>UniRef100_A1ZZA1 Two-component hybrid sensor and regulator n=1 Tax=Microscilla
           marina ATCC 23134 RepID=A1ZZA1_9SPHI
          Length = 460

 Score = 82.0 bits (201), Expect = 2e-14
 Identities = 45/133 (33%), Positives = 71/133 (53%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I E P +L++L  + + + +   G   R + P   +FC    A  N ++ ++ DA KD R
Sbjct: 41  ICETPISLMSLVAEDKQWFKAKVGLEPR-ETPREQAFCAH--AIHNPELFIVEDATKDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +RFY G PL   +G  +GTLC  D +PR+   ++   L  LA  V+  
Sbjct: 98  FHDNPLVTGNPDIRFYAGMPLTTPDGFSLGTLCVIDKRPRDLSEAQKTALKTLASQVIAQ 157

Query: 362 LEKDIALQLRAHD 400
           LE  + L+  AH+
Sbjct: 158 LELRLKLETIAHE 170

[79][TOP]
>UniRef100_Q7NVX0 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum
           RepID=Q7NVX0_CHRVO
          Length = 168

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 48/121 (39%), Positives = 61/121 (50%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
           F    AL++L D  R++ +   G     + P   SFC   +    D I+ IPDA  D RF
Sbjct: 42  FAVKIALISLVDSDRLWFKSRCG-LDASETPRDISFCAHAILG--DDILEIPDASNDNRF 98

Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364
            +N MV G P +RFY G PL  S+GH IGTLC  D KP+         L  LA  VV  +
Sbjct: 99  SDNPMVLGDPNIRFYAGAPLKLSSGHTIGTLCLIDPKPKRLAGEEKRHLKTLAHTVVLEI 158

Query: 365 E 367
           E
Sbjct: 159 E 159

[80][TOP]
>UniRef100_Q2P386 Putative uncharacterized protein XOO2236 n=2 Tax=Xanthomonas oryzae
           pv. oryzae RepID=Q2P386_XANOM
          Length = 618

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 49/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
 Frame = +2

Query: 20  ALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEM 199
           ALV+L D+ R + +   G  +R + P   +FC  T A R+D++MV+ DA  D R C+N +
Sbjct: 55  ALVSLVDEHRQWFKTRIGLEER-ETPRSQAFC--THAIRSDEVMVVLDARLDPRLCDNPL 111

Query: 200 VRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRHLE 367
           V G P +RFY G PL   +GH IGTLC     PRE  DA     L  L +L V  +E
Sbjct: 112 VLGPPFIRFYVGAPLKLRDGHSIGTLCAIGTSPREGLDAGAITQLEGLRDLAVLRVE 168

[81][TOP]
>UniRef100_B2SJM9 Putative signal protein with GAF, GGDEF and EAL domains n=1
           Tax=Xanthomonas oryzae pv. oryzae PXO99A
           RepID=B2SJM9_XANOP
          Length = 595

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 49/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
 Frame = +2

Query: 20  ALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEM 199
           ALV+L D+ R + +   G  +R + P   +FC  T A R+D++MV+ DA  D R C+N +
Sbjct: 32  ALVSLVDEHRQWFKTRIGLEER-ETPRSQAFC--THAIRSDEVMVVLDARLDPRLCDNPL 88

Query: 200 VRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRHLE 367
           V G P +RFY G PL   +GH IGTLC     PRE  DA     L  L +L V  +E
Sbjct: 89  VLGPPFIRFYVGAPLKLRDGHSIGTLCAIGTSPREGLDAGAITQLEGLRDLAVLRVE 145

[82][TOP]
>UniRef100_A6G6E5 GAF domain n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G6E5_9DELT
          Length = 369

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 46/121 (38%), Positives = 66/121 (54%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
           F+ P A ++L ++ R + +   G    G      +FC  T A   D+++++PDA +D RF
Sbjct: 45  FDVPMAFISLINEDRHWTKAGIGY--SGSIARDITFC--THAIEADEVLLVPDATQDERF 100

Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364
             N +V    GVRFY G PL+   GHR+GT+C  DV+PR       V+L  LA  VV  L
Sbjct: 101 AANPLVEPEGGVRFYAGAPLVVPGGHRLGTVCAVDVRPRTPKRELLVLLGALARQVVELL 160

Query: 365 E 367
           E
Sbjct: 161 E 161

[83][TOP]
>UniRef100_UPI00003839DD COG2203: FOG: GAF domain n=1 Tax=Magnetospirillum magnetotacticum
           MS-1 RepID=UPI00003839DD
          Length = 311

 Score = 81.3 bits (199), Expect = 3e-14
 Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 11/159 (6%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
           F    ALV+L D  R + +  +G     + P   SFCG  +    ++I V+ +A++   F
Sbjct: 23  FGVAIALVSLVDADRQWFKSCQG-IDASETPRNISFCGHAIL--REEIFVVTNAIEHPDF 79

Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLA-----EL 349
            +N +V G P +RFY G PL A +G R+GTLC  D +PR+F A    VL +LA     EL
Sbjct: 80  ADNPLVIGPPNIRFYAGAPLHAPDGERVGTLCVIDPRPRDFSAEDSDVLRDLANCVEGEL 139

Query: 350 VVRHLEKDIALQLRAHDNNSLAA------AYGXLRRTLD 448
            + H+ +++  Q+    N+ + A       +G L+ TL+
Sbjct: 140 ALAHI-RNLPEQINLSVNDMIWAFGLSMPTWGSLKNTLN 177

[84][TOP]
>UniRef100_Q1J3M1 Diguanylate cyclase with GAF sensor n=1 Tax=Deinococcus
           geothermalis DSM 11300 RepID=Q1J3M1_DEIGD
          Length = 531

 Score = 81.3 bits (199), Expect = 3e-14
 Identities = 52/149 (34%), Positives = 72/149 (48%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +   P A++   D  R + + A G  +    P   SFC W++    D  ++I +   D R
Sbjct: 63  LLRTPVAVINFIDRDRQWGKSAVG-LEDTTAPRHDSFCAWSILQ--DTPLIIENTATDPR 119

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F NN MV G P V  Y G PLI   GHRIGTLC  D +P    A+    L +LA LVV  
Sbjct: 120 FRNNPMVTGAPHVHMYAGAPLITPAGHRIGTLCVTDSQPHPLSAADIQALQDLAALVVSE 179

Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRRTLD 448
           LE     +    + ++ A     LRR+L+
Sbjct: 180 LELRARNRHLGLELDAQARLNADLRRSLE 208

[85][TOP]
>UniRef100_C1D402 Putative GAF/PAS/PAC domains-containing metal dependent
           phosphohydrolase n=1 Tax=Deinococcus deserti VCD115
           RepID=C1D402_DEIDV
          Length = 608

 Score = 81.3 bits (199), Expect = 3e-14
 Identities = 46/123 (37%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +  AP AL+ L DDR  + +   G   R +     SFC  T+      ++V+PD  +D R
Sbjct: 28  LLNAPIALINLLDDRTQWTKGCYGMDLR-EMDRSLSFCQHTLGMNG--VLVVPDTTQDPR 84

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358
           F +  +V G   +RFY G PLI  +GHR+G+LC  D  PR       C  L +LA+ VV 
Sbjct: 85  FSSLPLVTGDSAIRFYAGAPLITPDGHRVGSLCVLDTAPRIGLTEDECAFLQDLADSVVS 144

Query: 359 HLE 367
            LE
Sbjct: 145 ELE 147

[86][TOP]
>UniRef100_A6WJQ9 Diguanylate cyclase n=1 Tax=Shewanella baltica OS185
           RepID=A6WJQ9_SHEB8
          Length = 323

 Score = 81.3 bits (199), Expect = 3e-14
 Identities = 46/121 (38%), Positives = 63/121 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF  P  +V L D  R + +  +G  +  + P   SFCG   A   D I ++ DALKD R
Sbjct: 41  IFSLPICVVTLVDAERQWFKSRQG-LEVTETPREISFCGH--AINQDDIFIVNDALKDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PL     +R+GTLC    +PR+F A     L +L E+V   
Sbjct: 98  FSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPRDFTAEDIETLTDLGEMVEAE 157

Query: 362 L 364
           L
Sbjct: 158 L 158

[87][TOP]
>UniRef100_A3D450 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella baltica
           OS155 RepID=A3D450_SHEB5
          Length = 321

 Score = 81.3 bits (199), Expect = 3e-14
 Identities = 55/155 (35%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P ALV+L D+ R + +   G     +     SFCG  +   N   +VI DA  D R
Sbjct: 41  LFGVPIALVSLVDENRQWFKSCFG-LDVSETERSISFCGHAIL--NKSALVINDATLDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +RFY G PL   +G  +GTLC  D  PR+F      +L NLA +V R 
Sbjct: 98  FFDNPLVIGEPYIRFYAGQPLRTLSGQGLGTLCIIDQTPRDFSDEDITMLANLAGMVERE 157

Query: 362 LEKDIALQLRAHDN-NSLAAAYGXLRRTLDCFDHC 463
           +   +A+QL   D    ++   G L  T  C + C
Sbjct: 158 I---MAVQLTISDELTKISNRRGFLTLTRYCLEVC 189

[88][TOP]
>UniRef100_C9PIE2 GGDEF domain protein n=1 Tax=Vibrio furnissii CIP 102972
           RepID=C9PIE2_VIBFU
          Length = 324

 Score = 81.3 bits (199), Expect = 3e-14
 Identities = 42/121 (34%), Positives = 68/121 (56%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P ALV L D++R + + + G     + P   SFCG  +    D+  +I +A+ D R
Sbjct: 41  LFDVPIALVTLVDEKRQWFKSSFG-LNVSETPRDISFCGHAILG--DEPFIINNAVADER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PL+  +G ++GTLC  D +PR  +    + L +LA++  R 
Sbjct: 98  FADNPLVTDNPHIRFYAGVPLVFQDGSKLGTLCIIDTEPRNLNHDEIIDLLDLAKMAERE 157

Query: 362 L 364
           L
Sbjct: 158 L 158

[89][TOP]
>UniRef100_UPI0000383240 COG2202: FOG: PAS/PAC domain n=1 Tax=Magnetospirillum
           magnetotacticum MS-1 RepID=UPI0000383240
          Length = 397

 Score = 80.9 bits (198), Expect = 4e-14
 Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F   AA V+L D  R +++   G       P   SFC  T+    D ++VIPDA +D R
Sbjct: 39  LFGVAAAYVSLVDAERQWLKACAGTMP-AQMPREGSFCSRTI--EQDAVLVIPDARRDPR 95

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVR- 358
           F +  +V G P V FY G PLI   G R+G LC  D +PR F  +    L +LAE+V   
Sbjct: 96  FRDLGIVTGPPHVAFYAGAPLILRPGLRLGALCLVDPQPRTFTPADAEALRDLAEIVTAQ 155

Query: 359 -HLEKD 373
            HL +D
Sbjct: 156 LHLRRD 161

[90][TOP]
>UniRef100_Q5X574 Putative uncharacterized protein n=1 Tax=Legionella pneumophila
           str. Paris RepID=Q5X574_LEGPA
          Length = 441

 Score = 80.9 bits (198), Expect = 4e-14
 Identities = 49/132 (37%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGA----FKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           P A ++  D +  + + + G       R D     SFC +T+  +  + M+IPDAL D R
Sbjct: 77  PIAFISFIDSKHQWFKSSCGIGLNKISRND-----SFCHYTI--QQSKPMIIPDALLDER 129

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           FCNN  V   P +RFY G PL   +G  +GTLC  D KPR  D +   +L +LA L    
Sbjct: 130 FCNNPYVTNSPNIRFYAGFPLSTVDGFNVGTLCAIDKKPRNLDETEIQILKDLATLAEDQ 189

Query: 362 LE-KDIALQLRA 394
           +   DI+L  RA
Sbjct: 190 VNLLDISLLERA 201

[91][TOP]
>UniRef100_Q21KX5 Sensor protein n=1 Tax=Saccharophagus degradans 2-40
           RepID=Q21KX5_SACD2
          Length = 401

 Score = 80.9 bits (198), Expect = 4e-14
 Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 15/161 (9%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           + + P ALV+L D+RR + +  +G     +     +FC    A  +    V+ + L+D R
Sbjct: 41  VCDTPIALVSLVDERRQWFKSKQG-LTACETHRDLAFCAH--AIHDTAPFVVNNTLEDDR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +RFY G PLI  +G+ +GTLC  D +PR  D ++  +L+ LA  VV  
Sbjct: 98  FADNPLVTGPPDIRFYAGVPLICPDGYALGTLCVIDTRPRSLDDTQLTILSALARQVVAQ 157

Query: 362 LE-------KDIALQLRA-------HD-NNSLAAAYGXLRR 439
           LE        ++A  +RA       HD  NS   A G  +R
Sbjct: 158 LELRKQSTRLELANSIRARLITILTHDLRNSFQVAAGYAKR 198

[92][TOP]
>UniRef100_B0UA81 Putative phytochrome sensor protein n=1 Tax=Methylobacterium sp.
           4-46 RepID=B0UA81_METS4
          Length = 603

 Score = 80.9 bits (198), Expect = 4e-14
 Identities = 48/123 (39%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQ----IMVIPDALKDAR 181
           P A ++L D  R + + A+  F   + P   S C   +A+ +       +V+PD L D+R
Sbjct: 478 PFAALSLVDRDRQWFK-AKAGFPFRETPRDASLCAHAVAASDGSGARLPLVVPDTLLDSR 536

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N  V G P +RFY G PLI + GH IGTLC AD +PR  DA    +L  LA+L +R 
Sbjct: 537 FADNPAVVGPPYLRFYAGQPLILAQGHCIGTLCVADTRPRFLDADGETLLRWLADLALRE 596

Query: 362 LEK 370
           +E+
Sbjct: 597 IER 599

[93][TOP]
>UniRef100_A9L2M2 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella baltica
           OS195 RepID=A9L2M2_SHEB9
          Length = 323

 Score = 80.9 bits (198), Expect = 4e-14
 Identities = 46/121 (38%), Positives = 63/121 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF  P  +V L D  R + +  +G  +  + P   SFCG   A     I+++ DALKD R
Sbjct: 41  IFSLPTCVVTLVDAERQWFKSRQG-LEVTETPREISFCGH--AINQGDILIVNDALKDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PL     +R+GTLC    +PREF A     L +L E+V   
Sbjct: 98  FSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPREFTAEDIETLTDLGEMVEAE 157

Query: 362 L 364
           L
Sbjct: 158 L 158

[94][TOP]
>UniRef100_A1U6X2 Sensor protein n=1 Tax=Marinobacter aquaeolei VT8
           RepID=A1U6X2_MARAV
          Length = 681

 Score = 80.9 bits (198), Expect = 4e-14
 Identities = 48/121 (39%), Positives = 65/121 (53%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
           F+ P ALV+L D  R + +   G   R +     SFCG  +     +  V+ DAL D RF
Sbjct: 42  FDVPIALVSLVDRERQWFKSCYGLGVR-ETGRDISFCGHAILK--SEAFVVSDALADERF 98

Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364
            +N +V G P +RFY G PL   +G RIGTLC  D KPR F       L +LA+++ R L
Sbjct: 99  SDNPLVTGEPHIRFYAGAPLEDRSGFRIGTLCIIDKKPRGFSNRDEKTLRDLADIIEREL 158

Query: 365 E 367
           +
Sbjct: 159 Q 159

[95][TOP]
>UniRef100_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodiesterase (EAL), with
           GAF and two PAS/PAC sensor domains n=1
           Tax=Methylobacterium extorquens DM4 RepID=C7CCD7_METED
          Length = 1028

 Score = 80.9 bits (198), Expect = 4e-14
 Identities = 46/122 (37%), Positives = 65/122 (53%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P A V+L D  R + +   G    G  P   +FC + + S  D ++V+ +A  D R
Sbjct: 43  LFSVPIAFVSLVDSDRQWFKAKCGIAAEGT-PRDVAFCAYAILS--DDVLVVENAAVDPR 99

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F  N +V G   VRFY G PLI  +G R+GT+C  D KP  F   +   L +LA +VV H
Sbjct: 100 FAINPLVVGDLAVRFYAGAPLILRSGIRVGTICIFDTKPCSFSEMQRTQLQDLARIVVAH 159

Query: 362 LE 367
           +E
Sbjct: 160 IE 161

[96][TOP]
>UniRef100_C0N6E8 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010
           RepID=C0N6E8_9GAMM
          Length = 320

 Score = 80.9 bits (198), Expect = 4e-14
 Identities = 47/137 (34%), Positives = 73/137 (53%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F    +LV+L D+ R + + A+G     + P   SFCG   A   D + +IPDAL+D R
Sbjct: 41  MFGVSISLVSLVDENRQWFKSAQG-IDASETPREISFCGH--AINQDGLFIIPDALEDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PL    G  +GTLC  D +P+E D     +L +L  ++ + 
Sbjct: 98  FYDNPLVTDAPNIRFYAGYPLKLRQGINLGTLCLIDGEPKELDEEDQQLLEDLGAMIEQE 157

Query: 362 LEKDIALQLRAHDNNSL 412
           +    ++QL   D  +L
Sbjct: 158 IN---SIQLATLDELTL 171

[97][TOP]
>UniRef100_A4U3H0 Sensor protein n=1 Tax=Magnetospirillum gryphiswaldense
           RepID=A4U3H0_9PROT
          Length = 1382

 Score = 80.9 bits (198), Expect = 4e-14
 Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
           F    ALV+L D  R + +  +G     + P   SFCG  +    +++ V+ +A++   F
Sbjct: 42  FGVAIALVSLVDADRQWFKSCQG-IDASETPRNISFCGHAIL--REEVFVVTNAIEHPDF 98

Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLA-----EL 349
            +N +V G P +RFY G PL A +G R+GTLC  D KPR+F A    VL +LA     EL
Sbjct: 99  ADNPLVIGPPNIRFYAGAPLHAPDGERVGTLCVIDPKPRDFSAEDSDVLRDLANCVEGEL 158

Query: 350 VVRHLEK 370
            + H+ K
Sbjct: 159 SLTHIRK 165

[98][TOP]
>UniRef100_UPI0001693802 putative sensor protein n=1 Tax=Xanthomonas oryzae pv. oryzicola
           BLS256 RepID=UPI0001693802
          Length = 365

 Score = 80.5 bits (197), Expect = 5e-14
 Identities = 49/133 (36%), Positives = 67/133 (50%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P AL++L D  R + +   G  +  + P   SFC   +    DQ+M + D   D R
Sbjct: 68  LFRTPMALISLVDTHRQWFKSRIG-MQATETPRTLSFCAHAILEP-DQVMEVDDTHLDRR 125

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F  N +V G P +RFY G PL+ S+G  +GTLC  D  PR   A+    L  LA+ VV  
Sbjct: 126 FVINALVTGEPQIRFYAGAPLLTSDGIALGTLCVLDRTPRRLSAAERDALQALAKQVVNT 185

Query: 362 LEKDIALQLRAHD 400
           +E   A QL   D
Sbjct: 186 IELQQAAQLVQQD 198

[99][TOP]
>UniRef100_Q5WSQ0 Putative uncharacterized protein n=1 Tax=Legionella pneumophila
           str. Lens RepID=Q5WSQ0_LEGPL
          Length = 314

 Score = 80.5 bits (197), Expect = 5e-14
 Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P A+++  +  R +++  EG F   +   + SFCG  + S  D+IMVI DA KD R
Sbjct: 41  LFGIPIAVISFLEAERQWMKSTEG-FDIKEAKRKTSFCGHVILS--DEIMVIEDATKDKR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N  V G P  RFY G PL   N + +G +C  D KPR  + S   V+N+LA++V   
Sbjct: 98  FHDNPFVLGKPYFRFYAGCPL-KINKYNVGVICLIDDKPRSINDSDKNVINDLAQMVEME 156

Query: 362 LEKDIALQLRAHDN-NSLAAAYGXLRRTLDCFDHC 463
           LE   +L L   D    L+   G L+     F  C
Sbjct: 157 LE---SLHLSLTDELTGLSNRRGFLKLASYLFQKC 188

[100][TOP]
>UniRef100_A5IBY1 Adenylate cyclase PLUS two component hybrid sensor and regulator
           n=1 Tax=Legionella pneumophila str. Corby
           RepID=A5IBY1_LEGPC
          Length = 441

 Score = 80.5 bits (197), Expect = 5e-14
 Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGA----FKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           P A ++  D +  + + + G       R D     SFC +T+  + ++ M+IPDAL D R
Sbjct: 77  PIAFISFIDSKHQWFKSSCGIGLNKISRND-----SFCHYTI--QQNKPMIIPDALLDER 129

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAEL 349
           FCNN  V   P +RFY G PL   +G  +GTLC  D KPR  D +   +L +LA L
Sbjct: 130 FCNNPYVTNSPNIRFYAGFPLSTFDGFNVGTLCAIDKKPRNLDETEIQILKDLATL 185

[101][TOP]
>UniRef100_C9YAH7 Putative uncharacterized protein n=1 Tax=Curvibacter putative
           symbiont of Hydra magnipapillata RepID=C9YAH7_9BURK
          Length = 359

 Score = 80.5 bits (197), Expect = 5e-14
 Identities = 44/121 (36%), Positives = 68/121 (56%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I + P AL++L D+ R + +   G     + P   +FC   +    D++M +PDAL+DAR
Sbjct: 40  ICDTPIALISLVDEDRQWFKARLG-LSAMETPRGQAFCAHAIVDP-DRVMEVPDALQDAR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G PG+RFY G PL+  +G  +GT+C  D  PR+    +   L  L+  VV+ 
Sbjct: 98  FVDNPLVTGDPGIRFYAGAPLLTPSGAALGTVCVIDKVPRKLTERQSEALQALSRQVVQL 157

Query: 362 L 364
           L
Sbjct: 158 L 158

[102][TOP]
>UniRef100_C5TBD5 Diguanylate cyclase with GAF sensor n=1 Tax=Acidovorax delafieldii
           2AN RepID=C5TBD5_ACIDE
          Length = 369

 Score = 80.5 bits (197), Expect = 5e-14
 Identities = 50/126 (39%), Positives = 69/126 (54%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I EAP ALV+  D  R + + AE    R + P   S C + + SR   + V+PD  +DAR
Sbjct: 65  ICEAPIALVSFVDRERQWFK-AERGMGRRETPIDQSVCRFAIQSRG--VFVVPDLRQDAR 121

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V    GVRFY G PL   +G  +GT+C  D +PR     +  +LN LA  V+R 
Sbjct: 122 FASNPLVTQPHGVRFYAGAPLRTPDGFALGTVCVLDYQPRTLGQPQQDMLNVLAHQVMRL 181

Query: 362 LEKDIA 379
           LE  +A
Sbjct: 182 LELKLA 187

[103][TOP]
>UniRef100_A9HC88 Sensory box/GGDEF family protein, putative n=1 Tax=Roseobacter
           litoralis Och 149 RepID=A9HC88_9RHOB
          Length = 744

 Score = 80.5 bits (197), Expect = 5e-14
 Identities = 50/123 (40%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P  LV+L D  R + + A+      +     SFC  T A R + +MVIPDA KD R
Sbjct: 49  VFSVPIVLVSLIDLNRQWFK-AKVGLDLCETNLDVSFC--TYAVRQNDVMVIPDATKDIR 105

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358
           F NNE+V+   G+RFY G PL  ++G  +GTLC  D  P  +F +    +L  LA LVV 
Sbjct: 106 FANNELVKAPDGIRFYAGAPLRTTDGFVVGTLCLVDGVPHLDFGSEDRALLAKLAVLVVD 165

Query: 359 HLE 367
            +E
Sbjct: 166 LME 168

[104][TOP]
>UniRef100_A3YBC5 Diguanylate cyclase, putative n=1 Tax=Marinomonas sp. MED121
           RepID=A3YBC5_9GAMM
          Length = 324

 Score = 80.5 bits (197), Expect = 5e-14
 Identities = 47/121 (38%), Positives = 64/121 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P ALV+L D  R + +  +G     +     SFCG  +    D    IP+AL+D R
Sbjct: 41  LFHVPIALVSLIDKDRQWFKSCDG-LPVTETGRDISFCGHAILG--DNTFYIPNALEDQR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F  N +V G P +RFY G PL A+NG +IGTLC  D +P+E +      L  LA  V + 
Sbjct: 98  FFYNPLVTGDPNIRFYAGHPLKAANGEKIGTLCIIDSEPKELNEEELNCLAELANTVEQE 157

Query: 362 L 364
           L
Sbjct: 158 L 158

[105][TOP]
>UniRef100_A1ZNR6 Serine/threonine protein kinases n=1 Tax=Microscilla marina ATCC
           23134 RepID=A1ZNR6_9SPHI
          Length = 508

 Score = 80.5 bits (197), Expect = 5e-14
 Identities = 47/137 (34%), Positives = 72/137 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I EAP +L++L  + + + + A+   +  + P   +FC   + + N  + VI DA KD R
Sbjct: 41  ICEAPISLISLVAENKQWFK-AKVGLEMQETPRSQAFCAHAIHTPN--LFVIEDATKDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PL    G R+GTLC  D KPR+   ++   L  LA  V+  
Sbjct: 98  FWDNPLVTNSPDIRFYAGMPLTTPEGFRLGTLCVIDQKPRQLSLAQKQALQTLATQVITQ 157

Query: 362 LEKDIALQLRAHDNNSL 412
           LE  + L+  A +   L
Sbjct: 158 LELRLKLKTVAAERQEL 174

[106][TOP]
>UniRef100_UPI0001AEC0D5 histidine kinase response regulator hybrid protein n=1
           Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0D5
          Length = 542

 Score = 80.1 bits (196), Expect = 7e-14
 Identities = 47/122 (38%), Positives = 65/122 (53%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I E P AL++L D  R + +   G     +     +FC  + A     +  IP+A  D R
Sbjct: 41  ICETPIALISLIDPNRQWFKSRVG-LDAEETSRDIAFC--SHAILQSDVFEIPNATLDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +RFY G PLI  +GH IGTLC  D KPR+   ++   L  L++ VV H
Sbjct: 98  FHDNPLVTGAPDIRFYAGAPLITPSGHAIGTLCAIDSKPRKLTETQKSSLQTLSKSVVAH 157

Query: 362 LE 367
           LE
Sbjct: 158 LE 159

[107][TOP]
>UniRef100_Q4KGS9 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas
           fluorescens Pf-5 RepID=Q4KGS9_PSEF5
          Length = 591

 Score = 80.1 bits (196), Expect = 7e-14
 Identities = 45/122 (36%), Positives = 67/122 (54%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
           F+ P AL+ L D  R + +   G F     P   SFC +T+ S +  +  + +A +D RF
Sbjct: 40  FKVPTALITLVDRDRQWFKSRVG-FAPEQTPIEQSFCAYTIKSGD--VFEVENARQDVRF 96

Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364
             N +V   PG+ FY G PLI S GH IG+LC  D +P+  +A+    L +LA LV+  +
Sbjct: 97  HANPLVTQDPGIGFYAGAPLITSTGHAIGSLCVIDRQPQRLNAAERQQLRDLASLVMEQV 156

Query: 365 EK 370
           E+
Sbjct: 157 EQ 158

[108][TOP]
>UniRef100_Q1H3K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
           sensor(S) n=1 Tax=Methylobacillus flagellatus KT
           RepID=Q1H3K2_METFK
          Length = 727

 Score = 80.1 bits (196), Expect = 7e-14
 Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRW--SFCGWTMASRNDQIMVIPDALKD 175
           +F+ P A + +     +F   + GA   GD   R   SFC   +   N  +MV+PD+  D
Sbjct: 41  MFDMPVAAINMIGSDHVFFAASIGA---GDVDMRRDVSFCAHAINQTN--VMVVPDSHLD 95

Query: 176 ARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVV 355
            RF +N +V G   + FY G PLI+ +GH +G LC  D +PREF    C  L  LA++ V
Sbjct: 96  ERFHDNPLVMGPANLSFYAGIPLISPDGHALGALCVIDSQPREFSEEDCERLRELAKMAV 155

Query: 356 RHLE 367
             LE
Sbjct: 156 DRLE 159

[109][TOP]
>UniRef100_C5B219 Putative uncharacterized protein n=1 Tax=Methylobacterium
           extorquens AM1 RepID=C5B219_METEA
          Length = 279

 Score = 80.1 bits (196), Expect = 7e-14
 Identities = 45/117 (38%), Positives = 66/117 (56%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P AL++L D+ R + +   G    G  P   +FC +T+   +D + V+PDA   A 
Sbjct: 50  LFDVPIALISLLDEDRQWFKAKCGLHVSGT-PREQAFCNYTIL--HDSVFVVPDARAHAD 106

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
           F  N +V G P +RFY G PLI + G RIG+LC  D K R F+     +L  LA++V
Sbjct: 107 FALNPLVTGEPFIRFYAGAPLIVAPGTRIGSLCLIDRKLRAFNEEDSQLLARLAQVV 163

[110][TOP]
>UniRef100_C1F5G2 GAF domain/GGDEF domain protein n=1 Tax=Acidobacterium capsulatum
           ATCC 51196 RepID=C1F5G2_ACIC5
          Length = 369

 Score = 80.1 bits (196), Expect = 7e-14
 Identities = 42/122 (34%), Positives = 65/122 (53%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           + +AP A + L D+ R + +   G   + + P   SFC   +A   +++ V+PDA KDAR
Sbjct: 40  VCDAPMATITLVDEDRQWFKSRIGITAQ-ETPRSVSFCAHAIAQ--NELFVVPDATKDAR 96

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F  + +V   P +RFY G P+++  G  +GT+C  D KPRE    + V L  LA  V   
Sbjct: 97  FSGSPLVLDDPNIRFYAGMPIVSPEGFHVGTMCVLDKKPRELTEEKQVALRVLARQVAAQ 156

Query: 362 LE 367
            +
Sbjct: 157 FQ 158

[111][TOP]
>UniRef100_A9VXM6 GAF domain protein n=2 Tax=Methylobacterium extorquens group
           RepID=A9VXM6_METEP
          Length = 276

 Score = 80.1 bits (196), Expect = 7e-14
 Identities = 45/117 (38%), Positives = 66/117 (56%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P AL++L D+ R + +   G    G  P   +FC +T+   +D + V+PDA   A 
Sbjct: 47  LFDVPIALISLLDEDRQWFKAKCGLHVSGT-PREQAFCNYTIL--HDSVFVVPDARAHAD 103

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
           F  N +V G P +RFY G PLI + G RIG+LC  D K R F+     +L  LA++V
Sbjct: 104 FALNPLVTGEPFIRFYAGAPLIVAPGTRIGSLCLIDRKLRAFNEEDSQLLARLAQVV 160

[112][TOP]
>UniRef100_B4V775 Magnesium or manganese-dependent protein phosphatase (Fragment) n=1
           Tax=Streptomyces sp. Mg1 RepID=B4V775_9ACTO
          Length = 330

 Score = 80.1 bits (196), Expect = 7e-14
 Identities = 53/166 (31%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P A V + D+ RI+ + A G     +       CG  + S  D+ +VIPD L D  
Sbjct: 55  LFKVPVASVTIVDEDRIWFKAAHGLEGVNEISREPGLCGSAILS--DETLVIPDTLTDPV 112

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV--- 352
             NN +V G  GVRFY   P+I  +GHR+GT+   D +PR         L +LA +V   
Sbjct: 113 AFNNGLVAGPMGVRFYAAAPIITGDGHRLGTVNILDTRPRLITEDDTATLADLAAIVRDE 172

Query: 353 ---------------VRHLEKDIALQLRAHDNNSLAAAYGXLRRTL 445
                           R  E++ A Q    D N++ A    L+RTL
Sbjct: 173 LEMRLAALNALRAEQERRREQEEARQRAEQDKNAIEAFASTLQRTL 218

[113][TOP]
>UniRef100_C7CHC2 Putative uncharacterized protein n=1 Tax=Methylobacterium
           extorquens DM4 RepID=C7CHC2_METED
          Length = 267

 Score = 79.7 bits (195), Expect = 9e-14
 Identities = 45/117 (38%), Positives = 66/117 (56%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P AL++L D+ R + +   G    G  P   +FC +T+   +D + V+PDA   A 
Sbjct: 38  LFDVPIALISLLDEDRQWFKAKCGLHVSGT-PREQAFCNYTIL--HDSVFVVPDARAHAD 94

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
           F  N +V G P +RFY G PLI + G RIG+LC  D K R F+     +L  LA++V
Sbjct: 95  FALNPLVTGEPFIRFYAGAPLIVAPGTRIGSLCLIDRKLRAFNEEDSRLLARLAQVV 151

[114][TOP]
>UniRef100_B4VUP4 Sensor protein n=1 Tax=Microcoleus chthonoplastes PCC 7420
           RepID=B4VUP4_9CYAN
          Length = 1038

 Score = 79.7 bits (195), Expect = 9e-14
 Identities = 42/122 (34%), Positives = 64/122 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I +AP AL++L D  R + +   G       P   +FC   + +  DQ++++P+AL D R
Sbjct: 93  ICDAPIALISLLDATRQWFKSKVG-IDATQTPKEQAFCAHAILNP-DQVLMVPNALDDER 150

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F  N +V   P +RFY GTPL+  +G  +GTLC  D  PR+    +   L  L   V+  
Sbjct: 151 FAQNPLVTSEPNIRFYAGTPLVTPDGFALGTLCVIDQVPRQLTPEQIEALEALGRQVIAQ 210

Query: 362 LE 367
           +E
Sbjct: 211 IE 212

[115][TOP]
>UniRef100_Q8PEJ1 Putative uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv.
           citri RepID=Q8PEJ1_XANAC
          Length = 575

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 41/119 (34%), Positives = 68/119 (57%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P ALV+L D+RR + +   G     + P   +FC +T+  + D +M + DA  D RF +N
Sbjct: 42  PIALVSLVDERRQWWKANIGLPGVSETPRELAFCTYTI--QGDAVMEVRDAPADPRFHDN 99

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEK 370
            +V   PG+R+Y G P++  +G R+GT+C  D +PR  + ++   L  LA++    LE+
Sbjct: 100 ALVTDAPGIRYYAGAPIVLPDGLRMGTVCVIDQRPRALEPAQLQALQQLAKVAAEGLEQ 158

[116][TOP]
>UniRef100_Q8D4I0 FOG: GGDEF domain n=1 Tax=Vibrio vulnificus RepID=Q8D4I0_VIBVU
          Length = 322

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 43/121 (35%), Positives = 67/121 (55%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P ALV+L D+ R + +   G     + P   SFCG  +   +   +++ DA +DAR
Sbjct: 41  LFDVPIALVSLVDEDRQWFKSCFG-LNASETPRDISFCGHAILGADT--LIVEDASQDAR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +RFY G PL+  +   +GTLC  D KPR  +    + L +LA++  R 
Sbjct: 98  FADNPLVTGEPHIRFYAGVPLMFEHSSCLGTLCIIDTKPRTLNEDERLDLIDLAKMAERE 157

Query: 362 L 364
           L
Sbjct: 158 L 158

[117][TOP]
>UniRef100_Q7MG14 GGDEF family protein n=1 Tax=Vibrio vulnificus YJ016
           RepID=Q7MG14_VIBVY
          Length = 322

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 43/121 (35%), Positives = 67/121 (55%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P ALV+L D+ R + +   G     + P   SFCG  +   +   +++ DA +DAR
Sbjct: 41  LFDVPIALVSLVDEDRQWFKSCFG-LNASETPRDISFCGHAILGADT--LIVEDASQDAR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +RFY G PL+  +   +GTLC  D KPR  +    + L +LA++  R 
Sbjct: 98  FADNPLVTGEPHIRFYAGVPLMFEHSSCLGTLCIIDTKPRTLNEDERLDLIDLAKMAERE 157

Query: 362 L 364
           L
Sbjct: 158 L 158

[118][TOP]
>UniRef100_Q055K2 Sensor protein n=1 Tax=Leptospira borgpetersenii serovar
           Hardjo-bovis L550 RepID=Q055K2_LEPBL
          Length = 564

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 43/122 (35%), Positives = 66/122 (54%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I ++P  L++L D  R++ +   G    G  P   SFC +T+    D+I  I +AL D +
Sbjct: 46  ICDSPIVLISLIDTNRLWFKSKIGMNVSG-IPRDISFCQYTIIQ--DEIFEIENALNDEK 102

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F NN  V G P +RFY GTPL    G  +GTLC  D +P+  D+ + + L  L+  ++ +
Sbjct: 103 FQNNPFVLGPPYIRFYAGTPLKTPEGFNVGTLCVFDTEPKRLDSRQKMTLKVLSNQIIAN 162

Query: 362 LE 367
            E
Sbjct: 163 FE 164

[119][TOP]
>UniRef100_A3PPJ2 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides
           ATCC 17029 RepID=A3PPJ2_RHOS1
          Length = 325

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           + E P A V L D  R + +   G     + P   SFC  T+ +R+   MV+PDA  D R
Sbjct: 41  VLEVPYAAVTLIDADRQWFKSLVG-LSGSEGPRHESFCTHTIKTRDP--MVVPDATLDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F ++ +V G  G+R Y G PL   +G+ +G LC  D  PR F  S+  ++ + A LV+  
Sbjct: 98  FRDSPLVTGAAGIRSYLGVPLETPDGYNLGALCAVDTAPRTFSTSQIEIMKSFASLVLDE 157

Query: 362 LE-KDIAL 382
           LE + IAL
Sbjct: 158 LELRQIAL 165

[120][TOP]
>UniRef100_B5HZB9 Magnesium or manganese-dependent protein phosphatase n=1
           Tax=Streptomyces sviceus ATCC 29083 RepID=B5HZB9_9ACTO
          Length = 462

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 45/122 (36%), Positives = 62/122 (50%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +FE P A V + D+ RI+ + A G     +       C    A   D   VIPD L D  
Sbjct: 25  LFEVPVATVTIVDEDRIWFKAAHGLEGVSEIGRDPGLCA--SAVLTDDTTVIPDTLLDPV 82

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
            C+N +V G  GVRFY   P+I ++GHR+GT+   D +PRE   +    L +LA +V   
Sbjct: 83  ACSNPLVAGPMGVRFYAAAPIITADGHRLGTVNILDTRPREISEADASTLTDLAAVVRDQ 142

Query: 362 LE 367
           LE
Sbjct: 143 LE 144

[121][TOP]
>UniRef100_A3XLZ5 Sensor protein n=1 Tax=Leeuwenhoekiella blandensis MED217
           RepID=A3XLZ5_9FLAO
          Length = 415

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 52/139 (37%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P AL+ + D  R F++   G     + P   SFC   + + +D I +IPDA +D RF NN
Sbjct: 41  PIALITMLDYNRNFLKSHYGV-PFNESPREISFCTHAIQT-HDPIFIIPDAREDERFKNN 98

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE-- 367
            +V G     FY G PL+   GH +GTLC  D +PRE D ++   L  LA  VV   E  
Sbjct: 99  PLVTGDTKAIFYAGVPLVDKGGHALGTLCVFDHEPRELDENQISTLIALAHQVVNLFELR 158

Query: 368 ----KDIALQLRAHDNNSL 412
               ++ ALQ      NSL
Sbjct: 159 RQNIENKALQENLLKKNSL 177

[122][TOP]
>UniRef100_A3UFL0 GAF sensor diguanylate cyclase n=1 Tax=Oceanicaulis alexandrii
           HTCC2633 RepID=A3UFL0_9RHOB
          Length = 341

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 45/122 (36%), Positives = 66/122 (54%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I E P   V+L D  R + +   G     +     +FC +  A   ++ MV+PDA +D R
Sbjct: 45  ILEVPICAVSLVDADRQWFKAKRG-LAVCETERDIAFCSY--AIEQEEPMVVPDATEDPR 101

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F  N +V G P +R Y G PL++ +G+++GTLC  DV+PR+F      +L   A LVV  
Sbjct: 102 FSANPLVTGDPHLRAYVGVPLVSPDGYQVGTLCAMDVRPRDFSDHELKILRKFARLVVDE 161

Query: 362 LE 367
           LE
Sbjct: 162 LE 163

[123][TOP]
>UniRef100_Q3IWG8 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides
           2.4.1 RepID=Q3IWG8_RHOS4
          Length = 326

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           + E P A V L D  R + +   G     + P   SFC  T+ +R+   M++PDA  D R
Sbjct: 42  VLEVPYAAVTLIDADRQWFKSLVG-LSGSEGPRHESFCTHTIKTRDP--MIVPDATLDPR 98

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F ++ +V G  G+R Y G PL   +G+ +G LC  D  PR F  S+  ++ + A LV+  
Sbjct: 99  FRDSPLVTGAAGIRSYLGVPLETPDGYNLGALCAVDTAPRTFSTSQIEIMKSFASLVLDE 158

Query: 362 LE-KDIAL 382
           LE + IAL
Sbjct: 159 LELRQIAL 166

[124][TOP]
>UniRef100_B9KU13 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides
           KD131 RepID=B9KU13_RHOSK
          Length = 326

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           + E P A V L D  R + +   G     + P   SFC  T+ +R+   M++PDA  D R
Sbjct: 42  VLEVPYAAVTLIDADRQWFKSLVG-LSGSEGPRHESFCTHTIKTRDP--MIVPDATLDPR 98

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F ++ +V G  G+R Y G PL   +G+ +G LC  D  PR F  S+  ++ + A LV+  
Sbjct: 99  FRDSPLVTGAAGIRSYLGVPLETPDGYNLGALCAVDTAPRTFSTSQIEIMKSFASLVLDE 158

Query: 362 LE-KDIAL 382
           LE + IAL
Sbjct: 159 LELRQIAL 166

[125][TOP]
>UniRef100_B2JC03 Sensor protein n=1 Tax=Nostoc punctiforme PCC 73102
           RepID=B2JC03_NOSP7
          Length = 1297

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P  L++L D+ R + +   G F   + P   + C + + +  D+ ++IPDA  D R
Sbjct: 49  LFNMPTVLISLVDESRAWFKSCVG-FDAREVPRDDTLCNFAVLT--DEPLIIPDARLDDR 105

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358
           F  N  V+  PGVRFY G PL++ +G  +GTLC  D +P +     +   L +LA +VV 
Sbjct: 106 FACNPFVQSEPGVRFYAGAPLLSQDGFNLGTLCLLDSQPHDPLSVEQQATLVDLAAIVVD 165

Query: 359 HLEKDIALQLRAHDNNSLAAA 421
            LE    L+L +H    + AA
Sbjct: 166 ELE----LRLASHKIAQVDAA 182

[126][TOP]
>UniRef100_B0SII8 Sensor protein n=2 Tax=Leptospira biflexa serovar Patoc
           RepID=B0SII8_LEPBA
          Length = 553

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 46/122 (37%), Positives = 67/122 (54%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I  AP +LV+L D+ R + +   G  K  + P   +FC  + A   D++ +IP+A  D R
Sbjct: 41  ICHAPISLVSLIDETRQWFKSHHG-LKARETPRSLAFC--SHAILGDELFIIPNAKSDNR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F NN +V G P V FY G PL   +  ++GTLC  D KPRE +  +  +L  L +  VR 
Sbjct: 98  FKNNPLVNGDPNVIFYAGIPLALDDQIKLGTLCVIDNKPRELNEEQMQMLRLLGKQTVRL 157

Query: 362 LE 367
           L+
Sbjct: 158 LQ 159

[127][TOP]
>UniRef100_A8ILU5 Putative signaling protein n=1 Tax=Azorhizobium caulinodans ORS 571
           RepID=A8ILU5_AZOC5
          Length = 804

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P  LV+L    R F + + G F   +     SFC    A   D+I+VIPDA +D R
Sbjct: 107 VFDVPIVLVSLLGRDRQFFKASVG-FPVCETSREVSFCAH--AIMQDEILVIPDATRDPR 163

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358
           F  N +V G P +RFY G PLIA  G ++GT+C  D +PR  F  +    LN+LA + V 
Sbjct: 164 FRANPLVLGPPFIRFYAGRPLIAPTGEKVGTVCLIDHEPRFRFTETDRHNLNDLAAMAVD 223

Query: 359 HLE 367
            +E
Sbjct: 224 RME 226

[128][TOP]
>UniRef100_A3SZS5 Sensor protein n=1 Tax=Sulfitobacter sp. NAS-14.1
           RepID=A3SZS5_9RHOB
          Length = 422

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           + + P A +++ ++   + +   G       P    FC  T+ S  D  M++PD  KDAR
Sbjct: 41  LLDCPIAHISVVEEDSQWYKSVVG-MHLDPMPKDTGFCAHTIMS--DAPMIVPDLSKDAR 97

Query: 182 FCNNEMV-RGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVV 355
           F  + MV +GGP  R+Y G PLI S+GHR G+LC  D+KP E+ + + + +L +L  +VV
Sbjct: 98  FERHPMVAKGGPEARYYAGVPLILSSGHRFGSLCALDLKPHEYPSEKQIALLTDLGRIVV 157

Query: 356 RHLEK 370
             LE+
Sbjct: 158 AALER 162

[129][TOP]
>UniRef100_A3SE26 Sensor protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SE26_9RHOB
          Length = 422

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           + + P A +++ ++   + +   G       P    FC  T+ S  D  M++PD  KDAR
Sbjct: 41  LLDCPIAHISVVEEDSQWYKSVVG-MHLDPMPKDTGFCAHTIMS--DAPMIVPDLSKDAR 97

Query: 182 FCNNEMV-RGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVV 355
           F  + MV +GGP  R+Y G PLI S+GHR G+LC  D+KP E+ + + + +L +L  +VV
Sbjct: 98  FERHPMVAKGGPEARYYAGVPLILSSGHRFGSLCALDLKPHEYPSEKQIALLTDLGRIVV 157

Query: 356 RHLEK 370
             LE+
Sbjct: 158 AALER 162

[130][TOP]
>UniRef100_Q5WWB5 Putative uncharacterized protein n=1 Tax=Legionella pneumophila
           str. Lens RepID=Q5WWB5_LEGPL
          Length = 431

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 49/132 (37%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGA----FKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           P A ++  D +  + + + G       R D     SFC +T+  + ++ M+I DAL D R
Sbjct: 67  PIAFISFIDSKHQWFKSSCGIGLNKISRND-----SFCHYTI--QQNKPMIISDALLDER 119

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           FCNN  V   P +RFY G PL   +G  IGTLC  D KPR  D +   +L +LA L    
Sbjct: 120 FCNNPYVTNSPNIRFYAGFPLSTVDGFNIGTLCAIDKKPRNLDETEIQILKDLATLAEDQ 179

Query: 362 LE-KDIALQLRA 394
           +   DI+L  RA
Sbjct: 180 VNLLDISLLERA 191

[131][TOP]
>UniRef100_C1D2J4 Putative Diguanylate cyclase (GGDEF domain) with GAF sensor n=1
           Tax=Deinococcus deserti VCD115 RepID=C1D2J4_DEIDV
          Length = 508

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 45/120 (37%), Positives = 64/120 (53%)
 Frame = +2

Query: 44  RRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEMVRGGPGVR 223
           R+ +  D E    R D     SFC WT+ S  D ++ + DA +D RF + ++V G P +R
Sbjct: 59  RKSWFGDGETNCSRED-----SFCAWTILS--DDVLAVSDAREDPRFHDYKLVVGDPNIR 111

Query: 224 FYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKDIALQLRAHDN 403
            Y G PL+  +GHRIG+LC    + RE D      L +LA LV+  LE      LR H++
Sbjct: 112 MYAGAPLVTPSGHRIGSLCVFSAEARELDLDDQATLRDLAALVMDELE------LRLHNH 165

[132][TOP]
>UniRef100_A6SWK6 Diguanylate cyclase n=1 Tax=Janthinobacterium sp. Marseille
           RepID=A6SWK6_JANMA
          Length = 320

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 44/121 (36%), Positives = 61/121 (50%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P A V L     ++     G  ++       SFC  + A  +D+IM+IPD L D R
Sbjct: 41  VFNVPIAKVTLVGPEMVYTVSCAGE-QQAPIQRDLSFC--SHAIHSDEIMIIPDTLDDGR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N  V   P +RFY G PL+  NG R+GTLC  D  PR+      ++L +LA  V   
Sbjct: 98  FADNPFVVEDPRIRFYAGCPLVVMNGCRLGTLCLVDKVPRKMTQEDIILLKDLAATVEHE 157

Query: 362 L 364
           L
Sbjct: 158 L 158

[133][TOP]
>UniRef100_A1WZ01 Sensor protein n=1 Tax=Halorhodospira halophila SL1
           RepID=A1WZ01_HALHL
          Length = 680

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 45/122 (36%), Positives = 64/122 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I++ P A V   D  R + + A+G  +  + P   SFCG  +A  N   +V+ D  +D R
Sbjct: 41  IYQVPIATVTFVDRDRQWFKSAQG-LEDCETPRSTSFCGHVVADGNP--LVVEDTHQDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PLI   G  IG LC  D +PR F     + L +LA L++  
Sbjct: 98  FHDNPLVTSPPHIRFYAGVPLITPAGQPIGVLCIQDRQPRRFSDEDLIPLQDLAVLLISE 157

Query: 362 LE 367
           LE
Sbjct: 158 LE 159

[134][TOP]
>UniRef100_Q3AWZ6 GAF n=1 Tax=Synechococcus sp. CC9902 RepID=Q3AWZ6_SYNS9
          Length = 245

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 44/120 (36%), Positives = 63/120 (52%)
 Frame = +2

Query: 8   EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
           + P AL++L D  R + +   G     +    WSFC   + S   + ++I DAL+D RF 
Sbjct: 43  DTPIALLSLVDTNRQWFKSKVGVDVE-ETVRDWSFCAHAIHS--PEPLIIEDALQDERFV 99

Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
           +N +V+G P +R Y G PL     HRIGTLC  D KP      +C ++ +LA   V  LE
Sbjct: 100 DNPLVKGDPQIRLYAGFPLQNDQNHRIGTLCVIDRKPHGLTDVQCEIMESLARQAVSFLE 159

[135][TOP]
>UniRef100_Q13PE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1
           Tax=Burkholderia xenovorans LB400 RepID=Q13PE1_BURXL
          Length = 728

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 51/123 (41%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF  P AL++L +  R     + G     +     SFC    A R D IM+IPDA  DAR
Sbjct: 41  IFSVPIALISLVETERQLFAASVG-LDVCETSRDVSFCAH--AIRGDDIMIIPDARVDAR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358
           F +N +V G P +RFY G PL  ++GH +GTLC    +PRE F       L +LA LV+ 
Sbjct: 98  FHDNPLVTGAPFIRFYAGAPLRTASGHALGTLCIIGHRPRENFGEQDRRNLRDLAALVLD 157

Query: 359 HLE 367
            LE
Sbjct: 158 KLE 160

[136][TOP]
>UniRef100_Q09CZ9 Sensor protein n=1 Tax=Stigmatella aurantiaca DW4/3-1
           RepID=Q09CZ9_STIAU
          Length = 729

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 45/118 (38%), Positives = 63/118 (53%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P A ++L D+ R + + + G  +  + P   SFC  T A +  ++ V+PDA  DARF +N
Sbjct: 85  PTAFISLTDETRQWFKASTGVNEALEVPRDDSFC--TYAIQQKELFVVPDAALDARFRDN 142

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
             V GGP +RFY   PL+   G  +GT+C  D  PRE    +   L  LA  VV  LE
Sbjct: 143 PYVAGGPRIRFYAAAPLVTQEGFVLGTVCAIDRMPRELTPQQGRSLEALAGQVVSLLE 200

[137][TOP]
>UniRef100_C0N9M8 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010
           RepID=C0N9M8_9GAMM
          Length = 318

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 48/133 (36%), Positives = 70/133 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF+ P +LV+L D+ R + +   G   + +     SFCG  +    D+  VI D   D+R
Sbjct: 41  IFDVPISLVSLVDENRQWFKSCYGISAK-ETGRDVSFCGHAILG--DEAFVIEDTHLDSR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +RFY G P+   +   +GTLC  D +PR F     ++L  LAELV R 
Sbjct: 98  FVDNPLVVGEPHIRFYAGYPIRHVDNFILGTLCLIDTRPRHFSHREQLILQGLAELVERE 157

Query: 362 LEKDIALQLRAHD 400
           +    A+QL   D
Sbjct: 158 IH---AIQLATMD 167

[138][TOP]
>UniRef100_B4WNN7 GAF domain protein n=1 Tax=Synechococcus sp. PCC 7335
           RepID=B4WNN7_9SYNE
          Length = 242

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I + P AL++L D  R + +   G   R + P   SFC   + +++  I ++ DA  DAR
Sbjct: 40  ICDVPIALISLVDKDRQWFKSKVGISVR-ETPRDVSFCAHAILTKD--ITIVKDARDDAR 96

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PLI ++GH +GTLC  D +P+E    +   L  LA  +V  
Sbjct: 97  FSDNPLVTCAPNIRFYAGVPLITASGHPLGTLCVIDHQPKELSEVQRRTLIALARQIVVQ 156

Query: 362 LE-KDIALQL 388
           LE   ++LQL
Sbjct: 157 LELHRVSLQL 166

[139][TOP]
>UniRef100_A3JAN2 Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain
           n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAN2_9ALTE
          Length = 319

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 46/137 (33%), Positives = 74/137 (54%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F    +LV+L D+ R + + ++G  +  + P   SFCG   A   + + +IPDA++D R
Sbjct: 41  MFGVSVSLVSLVDEDRQWFKSSQG-LEATETPRDISFCGH--AINQNGLFIIPDAIEDVR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PL    G +IGTLC  D KPR  D     +  +L  +V + 
Sbjct: 98  FADNPLVTDAPNIRFYAGYPLEIREGLKIGTLCLIDQKPRVMDEEDQQLFKDLGAMVEQE 157

Query: 362 LEKDIALQLRAHDNNSL 412
           ++   ++QL   D  +L
Sbjct: 158 IK---SIQLATLDELTL 171

[140][TOP]
>UniRef100_B8CFN0 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana
           CCMP1335 RepID=B8CFN0_THAPS
          Length = 165

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 40/101 (39%), Positives = 55/101 (54%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IFE P  LV+L D  R +     G     +   + SFC   + S ND + ++PD   D R
Sbjct: 34  IFEVPICLVSLVDIGRQWFMSNRGLGDVRETSRQVSFCAHAILSSND-VFIVPDTHLDPR 92

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE 304
           F +N +V G P +RFY G PL++  G ++GT C  D KPRE
Sbjct: 93  FISNGLVTGPPFIRFYAGVPLVSPEGFKLGTFCIIDTKPRE 133

[141][TOP]
>UniRef100_Q2NYT0 Histidine kinase-response regulator hybrid protein n=2
           Tax=Xanthomonas oryzae pv. oryzae RepID=Q2NYT0_XANOM
          Length = 874

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 48/119 (40%), Positives = 61/119 (51%)
 Frame = +2

Query: 11  APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190
           AP ALV+L D  R + +   G+   G  P   SFC  + A    ++M +PDA  D RF N
Sbjct: 48  APVALVSLLDADRQWFKARCGSDLEGT-PRSASFC--SHAIMGTELMEVPDAEADPRFVN 104

Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
           N +V G PGVR Y G PLI   G+  GTLC    +PR  D  +   L  LA    + LE
Sbjct: 105 NPLVVGAPGVRSYVGVPLIGREGYAYGTLCTLSTRPRVLDEQQKQALIRLARQAAKQLE 163

[142][TOP]
>UniRef100_C6WVC8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1
           Tax=Methylotenera mobilis JLW8 RepID=C6WVC8_METML
          Length = 737

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 46/128 (35%), Positives = 65/128 (50%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I + P A++ L D+ R + +   G     + P   SFCG  +   +  I  IP+AL D R
Sbjct: 41  ICKTPIAIITLLDESRQWFKSKVG-LTATETPREISFCGHAILGND--IFEIPNALDDDR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +RFY G PL++S  + +GTLC  D K RE    +   L  L  LV   
Sbjct: 98  FIDNPLVTGNPNIRFYAGIPLVSSVNYALGTLCVIDQKARELSEEQRHSLKKLGRLVEAL 157

Query: 362 LEKDIALQ 385
           +E  I  Q
Sbjct: 158 IEARIQYQ 165

[143][TOP]
>UniRef100_B2SMT3 Putative signal protein with GAF,PAS(PAC) and GGDEF domains n=1
           Tax=Xanthomonas oryzae pv. oryzae PXO99A
           RepID=B2SMT3_XANOP
          Length = 874

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 48/119 (40%), Positives = 61/119 (51%)
 Frame = +2

Query: 11  APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190
           AP ALV+L D  R + +   G+   G  P   SFC  + A    ++M +PDA  D RF N
Sbjct: 48  APVALVSLLDADRQWFKARCGSDLEGT-PRSASFC--SHAIMGTELMEVPDAEADPRFVN 104

Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
           N +V G PGVR Y G PLI   G+  GTLC    +PR  D  +   L  LA    + LE
Sbjct: 105 NPLVVGAPGVRSYVGVPLIGREGYAYGTLCTLSTRPRVLDEQQKQALIRLARQAAKQLE 163

[144][TOP]
>UniRef100_B2J3P7 Diguanylate cyclase with GAF sensor n=1 Tax=Nostoc punctiforme PCC
           73102 RepID=B2J3P7_NOSP7
          Length = 406

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 43/122 (35%), Positives = 63/122 (51%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I + P AL++L D  R + +   G  K  + P   +FC   +    + I+VIP+A+KD R
Sbjct: 107 ICKTPIALISLVDADRQWFKSNIG-LKVRETPRESAFCSHAIL-HPENILVIPNAMKDDR 164

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F NN +V+    +RFY G PL+  NG  IGTLC  D  PR+    +   L  L    +  
Sbjct: 165 FANNPLVKSNSKIRFYAGAPLVTPNGFPIGTLCVMDTVPRQLSYQQLDALRRLTRQAIAQ 224

Query: 362 LE 367
           +E
Sbjct: 225 ME 226

[145][TOP]
>UniRef100_A8ICL8 Putative signal transduction protein n=1 Tax=Azorhizobium
           caulinodans ORS 571 RepID=A8ICL8_AZOC5
          Length = 611

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 46/123 (37%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P A V +     +F   + G F   D     SFC  T+     ++MV+PDA +D R
Sbjct: 41  VFKVPMAAVNMIGSDHVFFAASAG-FGAVDKRREVSFCAHTILQ--GKVMVVPDAEQDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358
           F +N +V G  G+RFY G PL++ +GH IG LC  D  PR  F +     L+ LA +V+ 
Sbjct: 98  FHDNPLVTGAAGIRFYAGAPLLSGDGHAIGALCILDTFPRVGFASEERERLSQLAHVVMD 157

Query: 359 HLE 367
            LE
Sbjct: 158 RLE 160

[146][TOP]
>UniRef100_A0L3B2 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella sp. ANA-3
           RepID=A0L3B2_SHESA
          Length = 325

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 54/147 (36%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I +AP A+V   DD ++ +  A+    R     + SFC + M +  D +MV+PDA  D R
Sbjct: 35  ICDAPVAMVTRTDDTKLNLI-AKVGISRTSVLIKESFCVYAMETP-DAVMVVPDATLDHR 92

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F  N MV  GPG RFY G+PLI   G  IGT+C  D  P++ +  +   L  L+  V+  
Sbjct: 93  FSTNAMVISGPGYRFYAGSPLIDPEGAVIGTICVYDHVPKQLNQRQISSLQALSRQVIAI 152

Query: 362 LE-KDIALQLRAHDNNSLAAAYGXLRR 439
           LE K +  QL  H+ +   A  G   R
Sbjct: 153 LELKKVGEQL--HNTSMTDALTGVNNR 177

[147][TOP]
>UniRef100_C8QG55 Diguanylate cyclase with GAF sensor n=1 Tax=Pantoea sp. At-9b
           RepID=C8QG55_9ENTR
          Length = 322

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDF-PWRWSFCGWTMASRNDQIMVIPDALKDA 178
           +F  P ALV+L ++   + +   G  + G+  P   SFCG  +    D +MV+ +AL D 
Sbjct: 41  LFGVPIALVSLLEEDHQWFKSIAG--QSGETAPRNTSFCGHAILQ--DDVMVVENALDDD 96

Query: 179 RFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVR 358
           RF +N +V G   VRFY G PL    G ++GTLC  D + R FDA  C  L +LA +   
Sbjct: 97  RFYDNPLVTGENPVRFYAGCPLRTPAGAKVGTLCIVDHQARSFDADDCHTLRDLAAMAEA 156

Query: 359 HLEKDIALQLRAHD 400
            L   IA Q    D
Sbjct: 157 EL---IAFQTATSD 167

[148][TOP]
>UniRef100_B9R099 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii
           DFL-11 RepID=B9R099_9RHOB
          Length = 877

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF+ P AL++L D+R  + + A G    G      S C   +++  D + V+PD L D R
Sbjct: 44  IFDCPIALISLVDERDQWFKAACGVDIEGTSR-EVSICQHALSA--DDLFVVPDTLSDER 100

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV--- 352
           FC+N +V G P +RFY G PL     +R+GTLC  D +PR+    +   L  +  +V   
Sbjct: 101 FCDNPLVMGEPNIRFYAGCPLSLDGKNRLGTLCVIDQRPRKPARQQLHQLRRMGRVVEGL 160

Query: 353 ----VRHLEKDIALQLRAHDNNSLAAAYGXL 433
                 ++EK+ AL  RA   +  A   G L
Sbjct: 161 LKSHQANVEKEAAL-ARAEAEHEEAVGKGRL 190

[149][TOP]
>UniRef100_A6EQZ6 Sensor protein n=1 Tax=unidentified eubacterium SCB49
           RepID=A6EQZ6_9BACT
          Length = 398

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 49/122 (40%), Positives = 67/122 (54%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I E P +L+ L D  R F +   G   + + P   SFCG  +    D I +I DA  DAR
Sbjct: 41  ICELPISLITLLDSDRNFFKSHHGIDIQ-ESPRDISFCGHAINQEED-IFIINDARLDAR 98

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V+    + FY G PLI  +G ++GTLC  D KPRE   S+  VL N+A+ VV+ 
Sbjct: 99  FKDNPLVKESQAI-FYAGAPLINPDGLKLGTLCVFDTKPRELTESQIKVLINMAKQVVKL 157

Query: 362 LE 367
            E
Sbjct: 158 FE 159

[150][TOP]
>UniRef100_A3KHX9 Putative magnesium or manganese-dependent protein phosphatase n=1
           Tax=Streptomyces ambofaciens ATCC 23877
           RepID=A3KHX9_STRAM
          Length = 493

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 44/122 (36%), Positives = 60/122 (49%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P A V + D  RI+ + A G     +       CG   A   D  MVIPD LKD  
Sbjct: 55  LFDVPVATVTIVDTDRIWFKAAHGLEGVAEIGRDPGLCG--SAILRDDTMVIPDTLKDPV 112

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
             +N +V G  GVRFY   P+I   GHR+GT+   D +PR         L +LA +V+  
Sbjct: 113 AADNPLVAGDMGVRFYAAAPIITPEGHRLGTVNVLDTRPRSITEEDTATLADLAAIVLDE 172

Query: 362 LE 367
           +E
Sbjct: 173 ME 174

[151][TOP]
>UniRef100_A0JRC3 Serine/threonine protein kinase n=1 Tax=Arthrobacter sp. FB24
           RepID=A0JRC3_ARTS2
          Length = 471

 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 47/140 (33%), Positives = 74/140 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P A+V++ D  RI+ +   G  + G+       C    A   D++ V+PDA+ D R
Sbjct: 340 MFSVPVAIVSVVDHDRIWFKAHHGT-EVGEIGRDPGLCA--SAILQDEVWVVPDAVTDPR 396

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
              N +V G  G++FY G PL   +G+ +GT+C  D +PREF A     L +LA +V+  
Sbjct: 397 TLANPLVAGEFGLQFYAGVPLRTPDGYNLGTICILDRQPREFTAEDSRALEDLAAIVMND 456

Query: 362 LEKDIALQLRAHDNNSLAAA 421
           LE      LR    +++A+A
Sbjct: 457 LE------LRLQSRSAVASA 470

[152][TOP]
>UniRef100_Q060H4 GAF n=1 Tax=Synechococcus sp. BL107 RepID=Q060H4_9SYNE
          Length = 253

 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 44/120 (36%), Positives = 63/120 (52%)
 Frame = +2

Query: 8   EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
           + P AL++L D  R + +   G     +    WSFC   + S   + ++I DAL+D RF 
Sbjct: 43  DTPIALLSLVDTNRQWFKSKVGVDVE-ETVRDWSFCAHAIHS--PEPLIIEDALQDERFV 99

Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
           +N +V+G P +R Y G PL     HRIGTLC  D KP      +C ++ +LA   V  LE
Sbjct: 100 DNPLVQGEPQIRLYAGFPLQNDQNHRIGTLCVIDRKPHGLTDVQCKIMESLARQAVSFLE 159

[153][TOP]
>UniRef100_A3ETZ5 Diguanylate cyclase with GAF sensor n=1 Tax=Leptospirillum rubarum
           RepID=A3ETZ5_9BACT
          Length = 322

 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 44/116 (37%), Positives = 60/116 (51%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P ALV L D  R + +   G    G+ P   SFCG  +    +   +IPDA +D R
Sbjct: 41  LFNVPIALVTLVDKDRQWFKSNMG-LSVGETPRSVSFCGHAILQ--EDFFIIPDAREDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAEL 349
           F +N +V G P +RFY G  L   +  +IGTLC  D KPR  +    +VL +L  L
Sbjct: 98  FSDNPLVLGDPRIRFYAGCVLRTRDNQKIGTLCLIDHKPRTMETQDLLVLEDLTAL 153

[154][TOP]
>UniRef100_B8IM22 Putative phytochrome sensor protein n=1 Tax=Methylobacterium
           nodulans ORS 2060 RepID=B8IM22_METNO
          Length = 607

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRND----QIMVIPDALK 172
           F  P A ++L D  R + + + G   R + P   S C   +A+ +       +V+PD L 
Sbjct: 475 FAVPFAALSLVDSDRQWFKASHGLTFR-EVPRDASLCAHAVAASDGGGCRDPLVVPDTLL 533

Query: 173 DARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
           DARF ++  V G P +RFY G PLI ++GH IGTLC AD +PR  D      L  LAEL 
Sbjct: 534 DARFADSPAVVGPPHLRFYAGQPLILADGHCIGTLCIADTRPRVLDPEEERRLRWLAELA 593

Query: 353 VRHL 364
           +  +
Sbjct: 594 LNEI 597

[155][TOP]
>UniRef100_B7KWZ8 Sensor protein n=1 Tax=Methylobacterium chloromethanicum CM4
           RepID=B7KWZ8_METC4
          Length = 1125

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 44/121 (36%), Positives = 65/121 (53%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F    A ++L D  R +++   G           SFC  T+A   D ++V+PDA +D R
Sbjct: 39  LFGVAIAYISLVDAERQWLKACVGIMPT-QTSRAGSFCDRTIAQ--DAMLVVPDARRDPR 95

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F + E+V G P + FY G PLI   G R+G+LC AD +PR+F       L +LAE+V   
Sbjct: 96  FSSLEIVTGPPHIVFYAGAPLILRPGVRLGSLCLADSQPRDFTPEDAAALRDLAEIVTAQ 155

Query: 362 L 364
           +
Sbjct: 156 M 156

[156][TOP]
>UniRef100_A9VWI8 Diguanylate cyclase n=1 Tax=Methylobacterium extorquens PA1
           RepID=A9VWI8_METEP
          Length = 1428

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 38/86 (44%), Positives = 54/86 (62%)
 Frame = +2

Query: 107 SFCGWTMASRNDQIMVIPDALKDARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFA 286
           SFC +T+ S  DQ++++ DAL+D RF  N +V G P +RFY G PL+   G  +G+LC  
Sbjct: 73  SFCTYTILS--DQVLLVEDALQDERFSANPLVTGEPHIRFYAGAPLVLGAGIHLGSLCLI 130

Query: 287 DVKPREFDASRCVVLNNLAELVVRHL 364
           D  PR F A +   L +LA++VV  L
Sbjct: 131 DRVPRSFSAEQQEQLRDLAQIVVAQL 156

[157][TOP]
>UniRef100_Q26DS7 Sensor protein n=1 Tax=Flavobacteria bacterium BBFL7
           RepID=Q26DS7_9BACT
          Length = 402

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 45/123 (36%), Positives = 69/123 (56%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I EAP +L+ L D  R F++  +G     + P   SFCG  + S  ++IM++ DA +D R
Sbjct: 41  ICEAPISLITLVDKDRNFLKSRQGV-DLSESPRDISFCGHAIVSE-EEIMIVTDAREDER 98

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G   + FY G PL+  NG+++GTLC  D KPR     +   L  +A+ V+  
Sbjct: 99  FKDNPLVEGLDAI-FYAGVPLVDVNGYKLGTLCVYDHKPRVLTNHQISALKAMAKQVMSL 157

Query: 362 LEK 370
            E+
Sbjct: 158 FEE 160

[158][TOP]
>UniRef100_B8BRK9 Putative uncharacterized protein (Fragment) n=1 Tax=Thalassiosira
           pseudonana CCMP1335 RepID=B8BRK9_THAPS
          Length = 164

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P ALV+L D+ R + + + G     + P   +FC   +   ND + V+PDAL+D R
Sbjct: 38  MFNVPIALVSLVDEDRQWFKSSCGLSGVAETPRDHAFCAHAIL--NDDLFVVPDALQDER 95

Query: 182 FCNNEMVRGGPGVRFYCG----TPLIASNGHRI--GTLCFADVKPREFDASRCVVLNNLA 343
           F +N +V G P VRFY G    TP++  +G ++  G+LC  D KPR+        L +  
Sbjct: 96  FADNPLVVGAPNVRFYAGYPLKTPMLNGDGSQVTLGSLCVIDSKPRDLRLEERNALRDFG 155

Query: 344 ELVVRHL 364
            +V R +
Sbjct: 156 AMVEREI 162

[159][TOP]
>UniRef100_Q7NJL6 Sensor protein n=1 Tax=Gloeobacter violaceus RepID=Q7NJL6_GLOVI
          Length = 448

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P  +++L D+ R++ +   G +         S C W +  +  ++MVI DA  D R
Sbjct: 69  LFAVPVCVISLVDECRVWFKSKVG-WSGEQVQRDESLCSWAILQK--ELMVIHDARFDGR 125

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358
              N  V+  PG+RFY G PL + +G  +GTLC  D +P   FD  +   L +LA +VV 
Sbjct: 126 LACNPWVQAEPGIRFYAGAPLTSPDGFNLGTLCLIDTQPHATFDEPQRRTLADLAAIVVD 185

Query: 359 HLEKDIALQLRAHDNNSLAA 418
            LE  + L L + + + LAA
Sbjct: 186 ELE--LRLSLESAEQSRLAA 203

[160][TOP]
>UniRef100_Q4UZ06 Histidine kinase/response regulator hybrid protein n=2
           Tax=Xanthomonas campestris pv. campestris
           RepID=Q4UZ06_XANC8
          Length = 865

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 43/119 (36%), Positives = 62/119 (52%)
 Frame = +2

Query: 11  APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190
           +P AL++L D  R + +   G    G  P   SFC +T+   +  ++ +PDA+ D RF +
Sbjct: 48  SPMALISLLDADRQWFKARCGTDLEGT-PRSVSFCSYTVMGTD--LLEVPDAIADPRFTH 104

Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
           N +V   PG+R Y G PLI   G+  GTLC    +PR  D ++   L  LA   V  LE
Sbjct: 105 NPLVTAAPGIRSYVGVPLIGREGYAYGTLCMLSTRPRVLDENQKQALIRLARQAVNQLE 163

[161][TOP]
>UniRef100_Q4UVQ7 Putative uncharacterized protein n=2 Tax=Xanthomonas campestris pv.
           campestris RepID=Q4UVQ7_XANC8
          Length = 334

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 46/129 (35%), Positives = 65/129 (50%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P AL++L D  R + +   G  +  + P   +FC   +  + DQ+M + D   D RF  N
Sbjct: 44  PMALISLIDQDRQWFKSRVG-MQPAETPRDLAFCAHAIL-QPDQMMEVGDTFVDPRFARN 101

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373
            +V GGP +RFY G PL+ S+G  +GTLC  D  PR    +    L  LA  VV  +E  
Sbjct: 102 ALVTGGPQIRFYAGAPLLTSDGVALGTLCVLDRAPRTLSDAERTALQALARQVVTTIELR 161

Query: 374 IALQLRAHD 400
            A +L   D
Sbjct: 162 QAARLLEGD 170

[162][TOP]
>UniRef100_C5B0Z3 Sensor protein n=1 Tax=Methylobacterium extorquens AM1
           RepID=C5B0Z3_METEA
          Length = 1125

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 44/121 (36%), Positives = 64/121 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F    A ++L D  R +++   G           SFC  T+A   D ++V+PDA +D R
Sbjct: 39  LFGVAIAYISLVDAERQWLKACVGIMPT-QTSRAGSFCDRTIAQ--DAMLVVPDARRDPR 95

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F   E+V G P + FY G PLI   G R+G+LC AD +PR+F       L +LAE+V   
Sbjct: 96  FSGLEIVTGPPHIVFYAGAPLILRPGVRLGSLCLADSQPRDFTPEDAAALRDLAEIVTAQ 155

Query: 362 L 364
           +
Sbjct: 156 M 156

[163][TOP]
>UniRef100_B1ZHF5 Sensor protein n=1 Tax=Methylobacterium populi BJ001
           RepID=B1ZHF5_METPB
          Length = 1120

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 50/146 (34%), Positives = 70/146 (47%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F   AA + L D  R +++   G     + P   SFC  T+    D I+ + DA +D R
Sbjct: 39  LFGVAAAYICLVDAERQWLKACSGTMP-AETPREGSFCVRTI--EQDAILAVRDARRDPR 95

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F    +V G P V FY G PLI   G R+G LC  D +PR+F       L +LAE+V   
Sbjct: 96  FSGLGIVTGPPHVVFYAGAPLILRPGVRLGALCLVDSQPRDFTPDDAAALRDLAEIV--- 152

Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRR 439
                  Q+R   +N + A+   LRR
Sbjct: 153 -----TAQMRLRRDNLVTASEKALRR 173

[164][TOP]
>UniRef100_B0RRX7 Putative sensor protein n=1 Tax=Xanthomonas campestris pv.
           campestris str. B100 RepID=B0RRX7_XANCB
          Length = 377

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 46/129 (35%), Positives = 65/129 (50%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P AL++L D  R + +   G  +  + P   +FC   +  + DQ+M + D   D RF  N
Sbjct: 87  PMALISLIDQDRQWFKSRVG-MQPAETPRDLAFCAHAIL-QPDQMMEVGDTFVDPRFARN 144

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373
            +V GGP +RFY G PL+ S+G  +GTLC  D  PR    +    L  LA  VV  +E  
Sbjct: 145 ALVTGGPQIRFYAGAPLLTSDGVALGTLCVLDRAPRTLSDAERTALQALARQVVTTIELR 204

Query: 374 IALQLRAHD 400
            A +L   D
Sbjct: 205 QAARLLEGD 213

[165][TOP]
>UniRef100_B0RNH7 Diguanylate cyclase sensor protein n=1 Tax=Xanthomonas campestris
           pv. campestris str. B100 RepID=B0RNH7_XANCB
          Length = 865

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 43/119 (36%), Positives = 62/119 (52%)
 Frame = +2

Query: 11  APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190
           +P AL++L D  R + +   G    G  P   SFC +T+   +  ++ +PDA+ D RF +
Sbjct: 48  SPMALISLLDADRQWFKARCGTDLEGT-PRSVSFCSYTVMGTD--LLEVPDAIADPRFTH 104

Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
           N +V   PG+R Y G PLI   G+  GTLC    +PR  D ++   L  LA   V  LE
Sbjct: 105 NPLVTAAPGIRSYVGVPLIGREGYAYGTLCMLSTRPRVLDENQKQALIRLARQAVNQLE 163

[166][TOP]
>UniRef100_C7C741 Sensor protein n=1 Tax=Methylobacterium extorquens DM4
           RepID=C7C741_METED
          Length = 1125

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 44/121 (36%), Positives = 64/121 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F    A ++L D  R +++   G           SFC  T+A   D ++V+PDA +D R
Sbjct: 39  LFGVAIAYISLVDAERQWLKACVGIMPT-QTSRAGSFCDRTIAQ--DAMLVVPDARRDPR 95

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F   E+V G P + FY G PLI   G R+G+LC AD +PR+F       L +LAE+V   
Sbjct: 96  FSGLEIVTGPPHIVFYAGAPLILRPGVRLGSLCLADSQPRDFTPEDAAALRDLAEIVTAQ 155

Query: 362 L 364
           +
Sbjct: 156 M 156

[167][TOP]
>UniRef100_C4ZM83 Sensor protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZM83_THASP
          Length = 878

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 53/144 (36%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF  P ALV+L DD R + + A G       P   SFC   + S     +V+ DA +D R
Sbjct: 41  IFGVPIALVSLVDDARQWFKSAHGLCV-AQTPRDVSFCTHVVFSNAP--LVVEDAARDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREF---DASRCVVLNNLAELV 352
           F +N +V   P VRFY G PL +  G  +GTLC  D  PR F   + +R  +L   AE +
Sbjct: 98  FADNPLVTAAPQVRFYAGEPLRSDQGFVLGTLCVIDTVPRRFEEAERARLRLLARQAEQL 157

Query: 353 VRHLEKDIALQLRAHDNNSLAAAY 424
           +R   K   L   A  +  +AA Y
Sbjct: 158 IRLHRKRQRLADEARRSARIAARY 181

[168][TOP]
>UniRef100_Q3BM12 Putative signal transduction protein n=1 Tax=Xanthomonas campestris
           pv. vesicatoria str. 85-10 RepID=Q3BM12_XANC5
          Length = 598

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 40/119 (33%), Positives = 65/119 (54%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P ALV+L D+ R + +   G     + P   +FC  T+  + D +M + DA  D RF +N
Sbjct: 65  PIALVSLVDEHRQWWKANIGLPGVSETPRELAFCAHTI--QGDAVMEVRDAPADPRFHDN 122

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEK 370
            +V   PG+R+Y G P++  +G R+GT+C  D +PR  + ++   L  LA +    LE+
Sbjct: 123 ALVTDAPGIRYYAGAPIVLPDGLRMGTVCVIDQRPRALEPAQLQALQQLARVAAEGLEQ 181

[169][TOP]
>UniRef100_B7L1C7 Sensor protein n=1 Tax=Methylobacterium chloromethanicum CM4
           RepID=B7L1C7_METC4
          Length = 837

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
 Frame = +2

Query: 8   EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
           +AP A +   D  R +I+ A G   R + P    FC  T+A   D I+V+P+  ++    
Sbjct: 78  DAPMAHINFIDADRQWIKAAVGHDAR-EMPLHLGFCTQTLAE--DGILVLPNLKREPELA 134

Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
           +N +V G P +RFY G PLI  +G  IGTLC  D +PR     +  +L  LA  ++  LE
Sbjct: 135 SNPLVTGAPHLRFYAGVPLITPDGWAIGTLCVLDREPRTLTTQQEFILKALARNIMAQLE 194

Query: 368 ---KDIALQLRAHDNNSLAAAYGXLRRTLDC 451
                 AL+ R  +   +A A   L   +DC
Sbjct: 195 SRRSAAALRAREAELRLVADAMPVLIGFIDC 225

[170][TOP]
>UniRef100_A0KTF2 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella sp. ANA-3
           RepID=A0KTF2_SHESA
          Length = 322

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 45/121 (37%), Positives = 61/121 (50%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF  P  LV L D  R + +  +G  +    P   S C    A  +D I V+ DALKD R
Sbjct: 41  IFSLPICLVTLVDANRQWFKSRQG-IEVEQTPRDISLCAH--AINHDGIFVVHDALKDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           FC+N +V   P +RFY G PL     +R+GTLC    +PR+F       L +L ++V   
Sbjct: 98  FCDNPLVTEPPHIRFYVGYPLTIQGEYRVGTLCLIGNEPRDFTEEDAETLTDLGQMVEAE 157

Query: 362 L 364
           L
Sbjct: 158 L 158

[171][TOP]
>UniRef100_Q08QL2 Sensor protein n=1 Tax=Stigmatella aurantiaca DW4/3-1
           RepID=Q08QL2_STIAU
          Length = 421

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 48/129 (37%), Positives = 67/129 (51%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P ALV+L D  R + +   G     +     +FC   +    D++ V+PDA  D RF +N
Sbjct: 45  PVALVSLLDQGRQWFKARVGV-DAAETHRDLAFCAHAILQ--DELFVVPDAHLDERFQDN 101

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373
            +V G P VRFY GTPL  +NG  +GTLC  D  PRE    +   L     L+ R +E  
Sbjct: 102 PLVTGEPHVRFYAGTPLKTANGLNLGTLCVIDHVPRELKPEQTEAL----RLLGRQVESQ 157

Query: 374 IALQLRAHD 400
           + L+LRA +
Sbjct: 158 LQLRLRAQE 166

[172][TOP]
>UniRef100_C5AK43 Putative GAF sensor protein n=1 Tax=Burkholderia glumae BGR1
           RepID=C5AK43_BURGB
          Length = 372

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F AP AL++L    R + +   G   R + P  W+FC +T+   +    V+ DA +D+R
Sbjct: 240 VFSAPIALISLVTTDRQWFKAHHGLGVR-ETPRIWAFCNYTILGDS---FVVEDAQQDSR 295

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +RFY G PL  S+G+ +G+LC  D  PR+   +    L  LA+L+   
Sbjct: 296 FKDNVLVTGAPQIRFYAGAPLRDSDGYALGSLCVIDQVPRKASDTGMDALRLLADLISSR 355

Query: 362 --LEKDIALQLRAH 397
             L + +  QL+ H
Sbjct: 356 ICLAQKLREQLQRH 369

[173][TOP]
>UniRef100_B4WG98 GGDEF domain protein n=1 Tax=Synechococcus sp. PCC 7335
           RepID=B4WG98_9SYNE
          Length = 690

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 48/137 (35%), Positives = 68/137 (49%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           + + PA LV   D  R++++   GA    + P   +FC  T+  R+   +VI DA +   
Sbjct: 41  VCQMPAGLVTFVDTNRLWVKARVGA-DISETPRYLAFCDQTI--RHVDTLVIEDAQQHPE 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F NN +V G P VRFY G PLI  +G+ +GTLC  D +PR     +   L  L+  VV  
Sbjct: 98  FRNNPLVVGPPYVRFYAGHPLITPDGYALGTLCVLDYQPRRMSPQQINALRMLSHQVVAQ 157

Query: 362 LEKDIALQLRAHDNNSL 412
           +E           NNSL
Sbjct: 158 MELSRQAHQLQQVNNSL 174

[174][TOP]
>UniRef100_Q0HYE2 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella sp. MR-7
           RepID=Q0HYE2_SHESR
          Length = 323

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 45/121 (37%), Positives = 62/121 (51%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF  P  LV L D  R + +  +G  +  +     SFC    A  +  + +I DALKD R
Sbjct: 41  IFALPICLVTLVDANRQWFKSRQG-LEVTETSRDISFCAH--AINHSGVFIINDALKDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           FC+N +V   P +RFY G PL     +R+GTLC    +PREF A     L +L ++V   
Sbjct: 98  FCDNPLVIEPPHIRFYAGYPLTIHGEYRVGTLCLIGSEPREFSADDIETLTDLGQMVEAE 157

Query: 362 L 364
           L
Sbjct: 158 L 158

[175][TOP]
>UniRef100_C0QFX2 Two-component hybrid protein, sensory box hisitidine
           kinase/adenylate cyclase n=1 Tax=Desulfobacterium
           autotrophicum HRM2 RepID=C0QFX2_DESAH
          Length = 378

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P  L++L D  R + +   G     + P   +FC   +   +  IM++PDA  D+RF +N
Sbjct: 44  PICLISLVDSDRQWFKSKIG-LNVEETPRDQAFCAHAILEPD--IMIVPDATLDSRFFDN 100

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE-- 367
            +V   P +RFY G PLI   G+ +GTLC  D KPR+    +  +L  LA  VV  +E  
Sbjct: 101 PLVLKDPRIRFYAGAPLITPRGNELGTLCVIDQKPRKLTVEQVELLGILARQVVTQIELR 160

Query: 368 -KDIALQLRAHDNNSL 412
              I L+    D+N+L
Sbjct: 161 RTGIELRKAWEDSNNL 176

[176][TOP]
>UniRef100_C7C538 Putative uncharacterized protein n=1 Tax=Enterobacter turicensis
           RepID=C7C538_9ENTR
          Length = 326

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 41/117 (35%), Positives = 63/117 (53%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F AP ALV+L D  R++ +  +G   + + P   SFC   +    ++ +++PD   D R
Sbjct: 41  LFNAPVALVSLVDQERLWFKSCDGYCVQ-EVPRDISFCAHAILK--NEPLIVPDTHNDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
           F +N +V G   VRFY G P+   +G   G+ C  D  PREF A    +L +LA +V
Sbjct: 98  FFDNPLVTGETNVRFYAGCPVHLPDGATAGSFCIIDNVPREFGAEEVAMLKDLAAIV 154

[177][TOP]
>UniRef100_C1XPI5 Diguanylate cyclase (GGDEF) domain-containing protein n=1
           Tax=Meiothermus silvanus DSM 9946 RepID=C1XPI5_9DEIN
          Length = 343

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 47/149 (31%), Positives = 72/149 (48%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I   P AL++  D +R + + A+G  +  + P   SFC   +      + V+ DA +D R
Sbjct: 40  IGRTPIALISFIDRQRQWFKSAQG-LEIHEIPREASFCAHAILQHG--VTVVSDAWQDER 96

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F ++ +V G P +RFY G PLI  NG  +GT+C  D +PR+ +      L  LA  V+  
Sbjct: 97  FADHPLVVGEPKIRFYAGAPLITPNGEALGTVCVMDRQPRQMEEEEQKALAALARQVMAQ 156

Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRRTLD 448
           LE    ++ R      L  A   L+   D
Sbjct: 157 LELRREIRERQRYQELLEEANARLKVLAD 185

[178][TOP]
>UniRef100_B5JQD0 Sensor protein n=1 Tax=Verrucomicrobiae bacterium DG1235
           RepID=B5JQD0_9BACT
          Length = 401

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 40/126 (31%), Positives = 70/126 (55%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I E P AL++L D+ R + +   G   + +     +FC   +    ++++++PDA KD R
Sbjct: 41  ICEVPIALISLIDEERQWFKAKVGLDAK-ETSRELAFCAHAILEP-EEMLLVPDATKDKR 98

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +RFY G+P++  +   +GTLC  D + RE    +   L +L++ V  +
Sbjct: 99  FRDNPLVTGAPDIRFYAGSPIVTHDRQALGTLCVIDTETRELSEKQKEALRHLSKQVCAN 158

Query: 362 LEKDIA 379
           LE  +A
Sbjct: 159 LELRLA 164

[179][TOP]
>UniRef100_A4B9Q6 Diguanylate cyclase, putative n=1 Tax=Reinekea blandensis MED297
           RepID=A4B9Q6_9GAMM
          Length = 320

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 44/117 (37%), Positives = 62/117 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +FE P AL  L D+ R + +   G   + +     SFCG   A       ++ + LKDAR
Sbjct: 41  MFEVPIALFTLVDENRQWFKSCFGVDLK-ETDREISFCGH--AINGHDTFIVENTLKDAR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
           F +N +V G PG+RFY GTP+   +G+ IGTLC  D   R F      +L +LA L+
Sbjct: 98  FHDNPLVEGEPGIRFYAGTPVKTRDGYSIGTLCVMDRVARVFHPEDQAMLEDLARLL 154

[180][TOP]
>UniRef100_Q3MCU9 Sensor protein n=1 Tax=Anabaena variabilis ATCC 29413
           RepID=Q3MCU9_ANAVT
          Length = 1550

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 40/118 (33%), Positives = 60/118 (50%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P AL++L D  R + +   G  +R + P   +FC +T+   +  + ++PDA  D RF  N
Sbjct: 44  PIALISLIDQNRQWFKSKVG-LERRETPRDEAFCTYTILESD--VFIVPDATTDERFATN 100

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
            +V   P +RFY G PL    G+ +GTLC  D  PR     +   L  L   V++ LE
Sbjct: 101 PLVISDPKIRFYAGVPLTNPEGYSLGTLCVIDYIPRNLSPEQIEALQILGRQVIKQLE 158

[181][TOP]
>UniRef100_Q319B9 GAF domain n=1 Tax=Prochlorococcus marinus str. MIT 9312
           RepID=Q319B9_PROM9
          Length = 249

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 42/118 (35%), Positives = 64/118 (54%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P +L+ L D  R + +   G  +  +    WSFC  T A + +  ++I DA +D RF NN
Sbjct: 46  PISLMTLVDKDRQWFKSKVG-LQISETRRDWSFC--THAIKENSPLIIHDAFQDERFINN 102

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
            +V G P +RFY G PL  S+G+++GTLC  D KP      +  ++  L+  +V  LE
Sbjct: 103 PLVTGDPKIRFYAGFPLKTSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSRQIVSFLE 160

[182][TOP]
>UniRef100_Q1GWG1 Signal transduction histidine kinase n=1 Tax=Sphingopyxis
           alaskensis RepID=Q1GWG1_SPHAL
          Length = 514

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 42/100 (42%), Positives = 59/100 (59%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+AP AL++L DD R + + A G     + P   SFC   +   ++Q +++ DA  D R
Sbjct: 67  LFDAPIALISLVDDCRQWFKSAHG-LDVPETPRDISFCKHVV--EDEQPLIVGDAASDPR 123

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR 301
           F +N +V G P +RFY G PL A NG  +GTLC  D KPR
Sbjct: 124 FQDNPLVTGEPYIRFYGGVPLFAYNGAILGTLCIIDRKPR 163

[183][TOP]
>UniRef100_Q12JR1 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella
           denitrificans OS217 RepID=Q12JR1_SHEDO
          Length = 320

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 41/122 (33%), Positives = 66/122 (54%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F    +LV+L D+ R + +  +G     +     SFCG   A   D + +IPD  +DAR
Sbjct: 41  MFGVQISLVSLVDENRQWFKSKQG-LDAEETSREISFCGH--AINQDGLFIIPDTNEDAR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PL   +G  +GTLC  D KP+  D+    +LN+L  ++ + 
Sbjct: 98  FADNPLVTDAPNIRFYAGYPLKLRHGINLGTLCLIDSKPKILDSEDRQLLNDLGAMIEQE 157

Query: 362 LE 367
           ++
Sbjct: 158 IK 159

[184][TOP]
>UniRef100_A2BY81 GAF domain n=1 Tax=Prochlorococcus marinus str. MIT 9515
           RepID=A2BY81_PROM5
          Length = 238

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 42/118 (35%), Positives = 67/118 (56%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P +L+ L D  + + +   G  +  +    WSFC  T A + +  ++I DA +D RF NN
Sbjct: 46  PISLMTLVDRDKQWFKSKVG-LEISETKRDWSFC--THAIQENSPLIIEDAFQDERFINN 102

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
            +V G P +RFY G PL  S+G+++GTLC  D KP    +++  V+  L++ +V  LE
Sbjct: 103 PLVTGDPKIRFYAGFPLKNSDGNKLGTLCVIDRKPGNLSSNQYNVMELLSKQIVSFLE 160

[185][TOP]
>UniRef100_C2HZG0 GGDEF domain protein n=1 Tax=Vibrio cholerae bv. albensis VL426
           RepID=C2HZG0_VIBCH
          Length = 351

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 40/121 (33%), Positives = 63/121 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P AL++L D+ R + +   G     +     SFCG  +  +  ++ VI DA +D R
Sbjct: 68  LFNVPIALISLVDENRQWFKSCYG-LNVSETSRDISFCGHAILGK--KVFVIEDASQDPR 124

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PL+  +   +GTLC  D KPR+      +   +LA++  R 
Sbjct: 125 FADNPLVTDAPNIRFYAGVPLLYEDSLALGTLCIIDTKPRQLTQDELLDFYDLAKMAERE 184

Query: 362 L 364
           L
Sbjct: 185 L 185

[186][TOP]
>UniRef100_B6ALC1 Diguanylate cyclase with GAF sensor n=1 Tax=Leptospirillum sp.
           Group II '5-way CG' RepID=B6ALC1_9BACT
          Length = 322

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 43/121 (35%), Positives = 61/121 (50%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P ALV L D+ R + +   G     + P   SFCG  +    +   +IPDA  D R
Sbjct: 41  LFNVPIALVTLVDEDRQWFKSNMG-LAVSETPRSVSFCGHAILQ--EDFFIIPDARSDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +RFY G  L   +  +IGTLC  D +PR  +    +VL +L  L  + 
Sbjct: 98  FSDNPLVLGDPRIRFYAGCVLRTQDNQKIGTLCLIDHEPRAMEPQDLLVLEDLTSLAEQE 157

Query: 362 L 364
           L
Sbjct: 158 L 158

[187][TOP]
>UniRef100_B4VLP5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420
           RepID=B4VLP5_9CYAN
          Length = 568

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 40/118 (33%), Positives = 60/118 (50%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P AL++L D  R + +   G       P   +FC   + +  D IMV+P+AL+D RF  N
Sbjct: 96  PIALISLIDQNRQWFKSKVG-IDATQTPRDQAFCAHAILNPED-IMVVPNALEDERFAGN 153

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
            +V   P +RFY G PL+  +G  +GTLC  D  P +    +   L  L+  V+  +E
Sbjct: 154 PLVTSDPNIRFYAGAPLVTEDGFPLGTLCVIDQIPHDLTPQQISALQALSRQVINQME 211

[188][TOP]
>UniRef100_A8TK82 Sensor protein n=1 Tax=alpha proteobacterium BAL199
           RepID=A8TK82_9PROT
          Length = 417

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 41/116 (35%), Positives = 62/116 (53%)
 Frame = +2

Query: 20  ALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEM 199
           A ++L D  R++ + A G     + P   SFC  + A  + ++M I D   D  F  N +
Sbjct: 46  AFISLVDAERVWFKSAFGVEGVREMPRHQSFC--SHAITDPRVMEIEDTWSDPVFAENPL 103

Query: 200 VRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
           V G P  RFY G PLI  +G+R+GTLC    +PR+ D  +   L +L+++  R LE
Sbjct: 104 VTGPPHTRFYAGAPLILRSGYRVGTLCVLGDQPRKLDDDQRASLIDLSQIATRFLE 159

[189][TOP]
>UniRef100_Q9RZS0 GGDEF family protein n=1 Tax=Deinococcus radiodurans
           RepID=Q9RZS0_DEIRA
          Length = 516

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 50/148 (33%), Positives = 69/148 (46%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I   PAA +   D  R + +   GA +R   P   S C WT+    D  +V+ +A  D R
Sbjct: 42  ILRTPAAYINFVDQSRQWTKACVGA-ERDSKPLSESMCAWTILQ--DAPLVVENARLDRR 98

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F + ++V G   ++ Y G PL   +GHRIGTLC  D +           L +LA LV+  
Sbjct: 99  FSHMQLVTGEASLQMYAGVPLTTPSGHRIGTLCVTDNQCHPLGDEDIQALQDLAALVMTE 158

Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRRTL 445
           LE   A Q    D  + +     LRRTL
Sbjct: 159 LELRAANQELQRDLQAASCQSEELRRTL 186

[190][TOP]
>UniRef100_Q8PPS5 Histidine kinase-response regulator hybrid protein n=1
           Tax=Xanthomonas axonopodis pv. citri RepID=Q8PPS5_XANAC
          Length = 880

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 48/119 (40%), Positives = 59/119 (49%)
 Frame = +2

Query: 11  APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190
           AP A+V+L D  R + +   G    G  P   SFC  + A    ++M +PDA  D RF N
Sbjct: 70  APMAMVSLLDADRQWFKARCGTDLEGT-PRSVSFC--SHAVMGTELMEVPDAEADPRFVN 126

Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
           N +V   PGVR Y G PLI   G+  GTLC     PR  D +R   L  LA   V  LE
Sbjct: 127 NPLVVAAPGVRSYVGVPLIGREGYAYGTLCTLSTTPRVLDENRKQALIRLARQAVNKLE 185

[191][TOP]
>UniRef100_Q3BSA9 Putative sensor protein n=1 Tax=Xanthomonas campestris pv.
           vesicatoria str. 85-10 RepID=Q3BSA9_XANC5
          Length = 361

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 45/125 (36%), Positives = 63/125 (50%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P AL++L D  R + +   G  ++ + P   SFC   +    DQ+M + D   D RF  N
Sbjct: 68  PMALISLVDTHRQWFKSRLG-MQQSETPRELSFCAHAILEP-DQVMEVGDTHLDKRFARN 125

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373
            +V G P +RFY G PL+  +G  +GTLC  D  PR   A+    L  LA  VV  +E  
Sbjct: 126 ALVTGEPQIRFYAGAPLLTPDGIALGTLCVLDRVPRRLSATERDALQALARQVVSTIELQ 185

Query: 374 IALQL 388
            A +L
Sbjct: 186 QAARL 190

[192][TOP]
>UniRef100_B7KR27 Signal transduction histidine kinase n=1 Tax=Methylobacterium
           chloromethanicum CM4 RepID=B7KR27_METC4
          Length = 1016

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 46/129 (35%), Positives = 65/129 (50%)
 Frame = +2

Query: 8   EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
           EAP A++ L  D R F +   G   R + P   SFC    A  +D  + +PD  +D RF 
Sbjct: 56  EAPIAVINLVGDGRQFFKAEVGLGVR-ETPLETSFC--RQAILHDDFLYVPDTARDPRFE 112

Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
            N +V G PG+RFY G  L    G  IGT+C  D +PRE    + + L  LA   +  +E
Sbjct: 113 GNPLVSGDPGLRFYAGALLRTDEGQPIGTVCVLDTRPRELSERQRLGLMRLARQAMTQME 172

Query: 368 KDIALQLRA 394
              +L+ +A
Sbjct: 173 LRRSLREQA 181

[193][TOP]
>UniRef100_A4TE01 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Mycobacterium
           gilvum PYR-GCK RepID=A4TE01_MYCGI
          Length = 603

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 40/122 (32%), Positives = 63/122 (51%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           + + P AL+   D  R +++  +G     +     SFC  TM    D ++ IPD   D+R
Sbjct: 58  VCDVPMALIGFLDAERQWLKSRQGV-GHSEIARELSFCASTMGD-GDTLIEIPDTRLDSR 115

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
              + MV G P +RFY G P+  + GH +GT+C  DV+PR    ++   L  LA+ V+  
Sbjct: 116 LAGHPMVTGDPHLRFYAGMPIRTAEGHALGTICVMDVEPRTLSDAQRSHLRTLADQVMNL 175

Query: 362 LE 367
           L+
Sbjct: 176 LD 177

[194][TOP]
>UniRef100_B4D9S4 Sensor protein n=1 Tax=Chthoniobacter flavus Ellin428
           RepID=B4D9S4_9BACT
          Length = 683

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 44/120 (36%), Positives = 63/120 (52%)
 Frame = +2

Query: 8   EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
           E P A+V L DDRR +++   G     + P   +FC   +    D++MV+ DA  D RF 
Sbjct: 44  ETPVAMVTLLDDRRQWLKARLGTHIT-ETPLAHAFCALAI-EHPDEVMVVTDARYDERFR 101

Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
            N  V G   +RFY G P++  +G  IGTLC  D +PR   A++  +L  LA   V  +E
Sbjct: 102 GNPYVTGYQKIRFYAGAPMVTPDGVPIGTLCVIDRQPRHISAAKRELLKALAHEAVSLME 161

[195][TOP]
>UniRef100_A5P8W2 Putative uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21
           RepID=A5P8W2_9SPHN
          Length = 507

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFD-DRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDA 178
           +F AP A+V++ + DR+ F+  A    +    P   SFC   M       MVIPDA +D 
Sbjct: 53  LFGAPMAMVSIVEKDRQAFL--ARTGIEADGTPRNVSFCAHAMLGAEP--MVIPDATQDP 108

Query: 179 RFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE 304
           RF  N +V G P VRFY G PL+++ G  +G LC  D +PRE
Sbjct: 109 RFAENALVTGSPHVRFYAGYPLVSTEGAPLGALCVIDTEPRE 150

[196][TOP]
>UniRef100_Q5ZVF0 Adenylate cyclase PLUS two component hybrid sensor and regulator
           n=1 Tax=Legionella pneumophila subsp. pneumophila str.
           Philadelphia 1 RepID=Q5ZVF0_LEGPH
          Length = 441

 Score = 74.7 bits (182), Expect = 3e-12
 Identities = 46/128 (35%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGA----FKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           P A ++  D    + + + G       R D     SFC +T+  + ++ M+I D L D R
Sbjct: 77  PIAFISFIDSEHQWFKSSCGIGLNKISRND-----SFCHYTI--QQNKPMIISDTLLDER 129

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           FCNN  V   P +RFY G PL   +G  +GTLC  D KPR  D +   +L +LA L    
Sbjct: 130 FCNNPYVTSEPNIRFYAGFPLSTVDGFNVGTLCAIDKKPRNLDETEIQILKDLATLAEDQ 189

Query: 362 LE-KDIAL 382
           L   DI+L
Sbjct: 190 LNLLDISL 197

[197][TOP]
>UniRef100_A1T6X4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Mycobacterium
           vanbaalenii PYR-1 RepID=A1T6X4_MYCVP
          Length = 599

 Score = 74.7 bits (182), Expect = 3e-12
 Identities = 48/143 (33%), Positives = 72/143 (50%)
 Frame = +2

Query: 11  APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190
           AP AL++  D  R +I+   G     +     SFC  T+A+ +  ++ IPD   D RF  
Sbjct: 61  APMALLSFVDATRQWIKSRHGV-DVAEIDREVSFCARTLAAAS--LLEIPDTHLDPRFAP 117

Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEK 370
           + MV G P VRFY G P++  +GH +G LC  D +PR     + V L  LA+ V+  L+ 
Sbjct: 118 HPMVTGDPHVRFYAGVPIVTGDGHALGALCVMDREPRTLSDPQRVHLQTLADQVLTLLQL 177

Query: 371 DIALQLRAHDNNSLAAAYGXLRR 439
               +  A + +   AA   LR+
Sbjct: 178 RSRTRQTASEIDRRLAADAALRQ 200

[198][TOP]
>UniRef100_A6EHA0 Sensor protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EHA0_9SPHI
          Length = 814

 Score = 74.7 bits (182), Expect = 3e-12
 Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I   P +L+ L D+ R + +   G  +  + P   +FC +T+  R  ++  +PD   D R
Sbjct: 43  ICNVPISLITLIDETRQWFKSRTG-LEISETPREVAFCQYTIMDR--EVFEVPDTWNDER 99

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLA----EL 349
           F +N +V G PG+RFY G PL   +G+ +GTLC  D KP +    +   L  L+    +L
Sbjct: 100 FRSNVLVTGDPGIRFYAGYPLTDPDGYALGTLCVIDRKPNQLTPQQHTALRLLSAEVMQL 159

Query: 350 VVRHLEKD 373
           +V   +K+
Sbjct: 160 IVERRQKE 167

[199][TOP]
>UniRef100_A1ZZA0 Multi-sensor Hybrid Histidine Kinase n=1 Tax=Microscilla marina
           ATCC 23134 RepID=A1ZZA0_9SPHI
          Length = 455

 Score = 74.7 bits (182), Expect = 3e-12
 Identities = 46/138 (33%), Positives = 68/138 (49%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I E P +L++L  + + + +   G   R + P   SFC    A     + V+ DA KD R
Sbjct: 41  ICETPVSLMSLVAEDKQWFKAKVGLEPR-EAPRELSFCAH--AIHTPDLFVVKDATKDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N  V   P VRFY G PL   +G  +GTLC  D +PR+ D ++   L  LA  V+  
Sbjct: 98  FHDNPFVADHPKVRFYAGMPLTTPDGFNLGTLCVIDQRPRDLDEAQKKALKTLAAQVIAQ 157

Query: 362 LEKDIALQLRAHDNNSLA 415
           LE  + L+    +   +A
Sbjct: 158 LELRLKLKTIGQEKRVIA 175

[200][TOP]
>UniRef100_Q2JR31 Sensor protein n=1 Tax=Synechococcus sp. JA-3-3Ab
           RepID=Q2JR31_SYNJA
          Length = 1523

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 43/118 (36%), Positives = 61/118 (51%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P ALV+L D+ R + +   G   + + P   +FC   + S  + + V+PDA +D RF +N
Sbjct: 45  PIALVSLIDEHRQWFKAKFGVDVQ-ETPRDVAFCAHAILSPQEPL-VVPDATQDPRFADN 102

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
             V   P +RFY G PL+   G  +GTLC  D +PR     +   L  LA  VV  LE
Sbjct: 103 PFVTQEPHIRFYAGIPLVTPEGQALGTLCVVDYQPRHLTPEQLEQLQALAHQVVAQLE 160

[201][TOP]
>UniRef100_Q2JP01 Sensor protein n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13)
           RepID=Q2JP01_SYNJB
          Length = 1526

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 43/118 (36%), Positives = 61/118 (51%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P ALV+L D+ R + +   G   + + P   +FC   + S  + + V+PDA +D RF +N
Sbjct: 45  PIALVSLIDEHRQWFKAKFGVDVQ-ETPRDVAFCAHAILSPKEPL-VVPDATQDPRFADN 102

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
             V   P +RFY G PL+   G  +GTLC  D +PR     +   L  LA  VV  LE
Sbjct: 103 PFVAQEPHIRFYAGIPLVTPEGQALGTLCVVDYQPRHLTPEQLEQLQALAHQVVAQLE 160

[202][TOP]
>UniRef100_B2FT01 Putative GGDEF GAF signalling protein n=1 Tax=Stenotrophomonas
           maltophilia K279a RepID=B2FT01_STRMK
          Length = 572

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 41/102 (40%), Positives = 58/102 (56%)
 Frame = +2

Query: 107 SFCGWTMASRNDQIMVIPDALKDARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFA 286
           SFC  T A R D++  IPDA +D RF  N +V GGP +R Y G PL +++G RIGTLC  
Sbjct: 69  SFC--THAIRQDELFEIPDARQDPRFSTNPLVTGGPRIRHYAGIPLGSTHGARIGTLCLL 126

Query: 287 DVKPREFDASRCVVLNNLAELVVRHLEKDIALQLRAHDNNSL 412
           D  P     S+  ++ +LA +  + LE+   L  +    N+L
Sbjct: 127 DPMPGVLSPSQRELMVHLARVTTQVLEQRSTLMAQVGQANAL 168

[203][TOP]
>UniRef100_B1JAA2 Diguanylate cyclase with GAF sensor n=1 Tax=Pseudomonas putida W619
           RepID=B1JAA2_PSEPW
          Length = 345

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 40/115 (34%), Positives = 62/115 (53%)
 Frame = +2

Query: 23  LVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEMV 202
           L++L D  R + +   G     + P   SFCG+ +    +  +++PDA +D RF +N +V
Sbjct: 48  LISLIDQERQWFKARIG-LAASETPRNVSFCGYAILG--EDTLLVPDATRDPRFVDNPLV 104

Query: 203 RGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
              P +RFY G PL A NG  IGTLC  D +PR  + ++     +LA L   +L+
Sbjct: 105 LSAPYIRFYAGHPLRAGNGKAIGTLCMLDPRPRTLNETQQANFKDLATLAEGYLQ 159

[204][TOP]
>UniRef100_A4FHE2 Putative regulatory protein n=1 Tax=Saccharopolyspora erythraea
           NRRL 2338 RepID=A4FHE2_SACEN
          Length = 443

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGW-----TMASRNDQIMVIPDA 166
           + +AP A V L DD RI+       FK G    R +  G        A   D+  V+ DA
Sbjct: 48  LLDAPIATVTLVDDERIW-------FKAGHGSRRLTHTGREPGLAASAIGQDEPYVVRDA 100

Query: 167 LKDARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAE 346
           L D R   + +V G PGVRFY   P+   +G+R+GT+   D +PR+  A     L++LA 
Sbjct: 101 LNDPRTARHPLVTGEPGVRFYAAAPITTLDGYRLGTVDVYDTRPRDIGARDLEALSDLAG 160

Query: 347 LVVRHLEKDIALQLRAHDNNSLAAAYGXLRRTLDCF 454
           +V+  LE  ++         S   A    R T++ F
Sbjct: 161 VVIDELELRLSALTTVRAERSRRQASDRTRETMEGF 196

[205][TOP]
>UniRef100_Q0FZZ8 Putative signal transduction histidine kinase with GAF domain n=1
           Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FZZ8_9RHIZ
          Length = 383

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 46/122 (37%), Positives = 65/122 (53%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           + EAP ALV+  D+ R F +   GA +R + P   SFC    A   + + +IPDA KD R
Sbjct: 42  VCEAPIALVSFLDEHRDFFKAEVGAGRR-EAPRETSFC--RHAVLQEHLTIIPDASKDPR 98

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G  +   +G  IGT+C  D+KPR  + ++   L  LA      
Sbjct: 99  FQHNPLVVDDPKLRFYAGAAIETPDGIPIGTVCVFDLKPRTLNENQGRTLKLLARQARTQ 158

Query: 362 LE 367
           LE
Sbjct: 159 LE 160

[206][TOP]
>UniRef100_A0NUT0 PAS:GGDEF protein n=1 Tax=Labrenzia aggregata IAM 12614
           RepID=A0NUT0_9RHOB
          Length = 1124

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 40/101 (39%), Positives = 57/101 (56%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IFEAP A +++     ++ +   G     D P   +FC   + SR+  +MV+PDA +DAR
Sbjct: 40  IFEAPIAFISIVGKDDLWYKAGTGIALE-DTPRSGTFCDQAILSRD--VMVVPDAHEDAR 96

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE 304
           F N+ +V G P +RFY G PL     H +G LC  D KPR+
Sbjct: 97  FRNSRLVCGPPHIRFYAGYPLSLDGTHILGALCVVDTKPRQ 137

[207][TOP]
>UniRef100_Q8PJT4 Putative uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv.
           citri RepID=Q8PJT4_XANAC
          Length = 346

 Score = 73.9 bits (180), Expect = 5e-12
 Identities = 45/125 (36%), Positives = 62/125 (49%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P AL++L D  R + +   G  ++ + P   SFC   +    DQ+M + D   D RF  N
Sbjct: 53  PMALISLVDTHRQWFKSRIG-MQQNETPRELSFCAHAILEP-DQVMEVGDTHLDERFVGN 110

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373
            +V G P +RFY G PL+  +G  +GTLC  D  PR    +    L  LA  VV  LE  
Sbjct: 111 ALVTGEPQIRFYAGAPLLTPDGIALGTLCVLDRVPRRLSVAERDALQALARQVVSTLELQ 170

Query: 374 IALQL 388
            A +L
Sbjct: 171 QAARL 175

[208][TOP]
>UniRef100_Q7U6L9 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 8102
           RepID=Q7U6L9_SYNPX
          Length = 233

 Score = 73.9 bits (180), Expect = 5e-12
 Identities = 46/122 (37%), Positives = 64/122 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I  AP AL++L D  R + +   G  ++       SFC  T+   N Q +++ DAL D R
Sbjct: 41  ICHAPIALISLVDQSRQWFKSRVGCDQQ-QTERDISFCAHTIL--NPQPLIVEDALFDQR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +VR  P +R Y G PL   N  RIGTLC  D  P+   + +  V+  LA+ VV  
Sbjct: 98  FQDNPLVREDPNIRLYAGFPLNTPNDQRIGTLCVIDRMPKSLTSIQIQVMKRLADQVVTL 157

Query: 362 LE 367
           LE
Sbjct: 158 LE 159

[209][TOP]
>UniRef100_Q31MP6 Diguanylate cyclase with GAF sensor n=2 Tax=Synechococcus elongatus
           RepID=Q31MP6_SYNE7
          Length = 506

 Score = 73.9 bits (180), Expect = 5e-12
 Identities = 46/132 (34%), Positives = 66/132 (50%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I E P AL++L D  R + +   G  +    P   SFCG   A + + + ++ DA  D R
Sbjct: 41  ICEVPIALISLIDRDRQWFKSRVG-LEDDSSPRSTSFCGH--AIQQEDLFIVEDAKADPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N  V   P +RFY G+PLI  +   +GTLC  D KPR  +  +   L  L+  V+R 
Sbjct: 98  FVDNPFVTQEPHIRFYAGSPLITDDEQILGTLCVIDRKPRHLNDLQQQALRILSRQVIRE 157

Query: 362 LEKDIALQLRAH 397
           LE   +L    H
Sbjct: 158 LELRRSLYQAEH 169

[210][TOP]
>UniRef100_Q0I9R3 GAF domain protein n=1 Tax=Synechococcus sp. CC9311
           RepID=Q0I9R3_SYNS3
          Length = 251

 Score = 73.9 bits (180), Expect = 5e-12
 Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P AL++L D  R + + A+   +  +    WSFC   + S   + +++ DALKD RF +N
Sbjct: 45  PIALLSLVDSDRQWFK-AKVGIEAEETVRDWSFCAHAIHS--SEPLIVEDALKDERFFDN 101

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE-- 367
            +V+G P +R Y G PL     HRIGTLC  D +P      +  ++ +L+   V  LE  
Sbjct: 102 PLVKGDPKIRLYAGFPLQNDENHRIGTLCVIDREPHGLTDIQFSIMESLSRQAVAFLELR 161

Query: 368 ----KDIALQLRAHDNNSLAAAYGXLRRTLDCFDHCVAL 472
               K I       DN ++ +     R+  D   H + L
Sbjct: 162 KRSIKLIESYCSLADNGNIISTCSYCRKAKDTDGHWLHL 200

[211][TOP]
>UniRef100_Q0HFI8 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella sp. MR-4
           RepID=Q0HFI8_SHESM
          Length = 323

 Score = 73.9 bits (180), Expect = 5e-12
 Identities = 43/121 (35%), Positives = 62/121 (51%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF  P  +V L D  R + +  +G  +  + P   SFC    A  +D + ++ DALKD R
Sbjct: 41  IFALPICVVTLVDANRQWFKSRQG-LEVTETPRDISFCAH--AINHDGVFIVNDALKDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V   P +RFY G PL     +R+GTLC    +PREF       L +L ++V   
Sbjct: 98  FFDNPLVTEPPHIRFYAGYPLTIQGEYRVGTLCLIGNEPREFSDDDIETLTDLGQMVEAE 157

Query: 362 L 364
           L
Sbjct: 158 L 158

[212][TOP]
>UniRef100_Q01ZT7 Sensor protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076
           RepID=Q01ZT7_SOLUE
          Length = 686

 Score = 73.9 bits (180), Expect = 5e-12
 Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+AP A+++  +  R+F +   G  +        SFC  T+ S +  +MV+PDA KD R
Sbjct: 41  LFQAPIAVISFVEQSRLFFKSHFG-LEISQISSHGSFCAHTILSND--VMVVPDAAKDPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358
           F +  +  GG  +RFY G PLI   G+R+G L   D +PR          L +LA LV+ 
Sbjct: 98  FASAPVTVGGLRIRFYAGAPLITPAGYRLGALAVMDTRPRPALTEDETATLVDLAGLVMH 157

Query: 359 HL 364
            L
Sbjct: 158 DL 159

[213][TOP]
>UniRef100_C5AX24 Putative histidine kinase of the HWE family n=1
           Tax=Methylobacterium extorquens AM1 RepID=C5AX24_METEA
          Length = 998

 Score = 73.9 bits (180), Expect = 5e-12
 Identities = 47/129 (36%), Positives = 64/129 (49%)
 Frame = +2

Query: 8   EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
           EAP A+V L  D R F +   G   R + P   SFC    A  +D  + +PD  +D RF 
Sbjct: 38  EAPIAVVNLVGDGRQFFKAEVGLGVR-ETPLETSFC--RQAILHDDFLYVPDTARDPRFE 94

Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
            N +V G PG+RFY G  L    G  IGT+C  D +PRE    +   L  LA   +  +E
Sbjct: 95  GNPLVSGDPGLRFYAGALLRTDEGQPIGTVCVLDTRPRELSERQRRGLMRLARQAMTQME 154

Query: 368 KDIALQLRA 394
              +L+ +A
Sbjct: 155 LRRSLREQA 163

[214][TOP]
>UniRef100_A9W3M5 Sensor protein n=1 Tax=Methylobacterium extorquens PA1
           RepID=A9W3M5_METEP
          Length = 1125

 Score = 73.9 bits (180), Expect = 5e-12
 Identities = 43/121 (35%), Positives = 63/121 (52%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F    A ++L D  R +++   G           SFC  T+A   D ++V+PDA +D R
Sbjct: 39  LFGVAIAYISLVDAERQWLKACVGIMPT-QTSRAGSFCDRTIAQ--DAMLVVPDARRDPR 95

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F   E+V G P + FY G PLI   G R+G+LC AD +P +F       L +LAE+V   
Sbjct: 96  FSGLEIVTGPPHIVFYAGAPLILRPGVRLGSLCLADSQPGDFTPEDAAALRDLAEIVTAQ 155

Query: 362 L 364
           +
Sbjct: 156 M 156

[215][TOP]
>UniRef100_A9W1Y6 PAS sensor protein n=1 Tax=Methylobacterium extorquens PA1
           RepID=A9W1Y6_METEP
          Length = 1041

 Score = 73.9 bits (180), Expect = 5e-12
 Identities = 47/129 (36%), Positives = 64/129 (49%)
 Frame = +2

Query: 8   EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
           EAP A+V L  D R F +   G   R + P   SFC    A  +D  + +PD  +D RF 
Sbjct: 81  EAPIAVVNLVGDGRQFFKAEVGLGVR-ETPLETSFC--RQAILHDDFLYVPDTARDPRFE 137

Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
            N +V G PG+RFY G  L    G  IGT+C  D +PRE    +   L  LA   +  +E
Sbjct: 138 GNPLVSGDPGLRFYAGALLRTDEGQPIGTVCVLDTRPRELSERQRRGLMRLARQAMTQME 197

Query: 368 KDIALQLRA 394
              +L+ +A
Sbjct: 198 LRRSLREQA 206

[216][TOP]
>UniRef100_Q1YE85 Possible sensor histidine kinase with GAF domain n=1
           Tax=Aurantimonas manganoxydans SI85-9A1
           RepID=Q1YE85_MOBAS
          Length = 514

 Score = 73.9 bits (180), Expect = 5e-12
 Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P A+V    D R F +   G   R + P   SFC   + +  + +M++PDA +D+RF NN
Sbjct: 68  PIAVVNFVSDTRQFFKAEVGLGVR-ETPVDISFCKHALLA--EDMMIVPDATQDSRFDNN 124

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373
            +V G P +RFY G  + ++ G  +GT+C  D  PRE DA +   L        R L + 
Sbjct: 125 PLVYGDPPLRFYAGVLVRSAEGLPLGTMCVLDHTPRELDAHQIRTL--------RLLARQ 176

Query: 374 IALQLRAHDN-NSLAAAYGXLRR 439
           +++QL  H +     AA G +RR
Sbjct: 177 VSIQLELHRSLRRTKAALGDVRR 199

[217][TOP]
>UniRef100_A8GEI1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Serratia
           proteamaculans 568 RepID=A8GEI1_SERP5
          Length = 624

 Score = 73.6 bits (179), Expect = 7e-12
 Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
           F    AL++L D  R +     G   R + P   SFCG  +  R+   +V+PD   D RF
Sbjct: 42  FGVSIALISLIDRERQWFLSRSGLEAR-ESPRNISFCGHAILQRD--ALVVPDTAADPRF 98

Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364
            +N +V GGP + FY G PL++ +G  +GTLC  D  P+ F +     L + A ++  +L
Sbjct: 99  FDNPLVTGGPKIGFYAGQPLLSLDGLPLGTLCIIDGHPQAFSSEMVHDLRDFAAVIEEYL 158

Query: 365 ---EKDI 376
              E+DI
Sbjct: 159 HSIERDI 165

[218][TOP]
>UniRef100_A8G6I2 GAF domain n=1 Tax=Prochlorococcus marinus str. MIT 9215
           RepID=A8G6I2_PROM2
          Length = 249

 Score = 73.6 bits (179), Expect = 7e-12
 Identities = 41/118 (34%), Positives = 65/118 (55%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P +L+ L D  + + +   G  +  +    WSFC  T A + +  ++I DA +D RF NN
Sbjct: 46  PISLMTLVDKDKQWFKSKIG-LQISETRRDWSFC--THAIKENSPLIIHDAFQDERFINN 102

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
            +V G P +RFY G PL  S+G+++GTLC  D KP      +  ++  L++ +V  LE
Sbjct: 103 PLVTGDPKIRFYAGFPLRNSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSKQIVSFLE 160

[219][TOP]
>UniRef100_A2BSU4 GAF domain-containing protein n=1 Tax=Prochlorococcus marinus str.
           AS9601 RepID=A2BSU4_PROMS
          Length = 249

 Score = 73.6 bits (179), Expect = 7e-12
 Identities = 41/118 (34%), Positives = 65/118 (55%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P +L+ L D  + + +   G  +  +    WSFC  T A + +  ++I DA +D RF NN
Sbjct: 46  PISLMTLVDKDKQWFKSKIG-LQISETRRDWSFC--THAIKENSPLIIHDAFQDERFINN 102

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
            +V G P +RFY G PL  S+G+++GTLC  D KP      +  ++  L++ +V  LE
Sbjct: 103 PLVTGDPKIRFYAGFPLRNSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSKQIVSFLE 160

[220][TOP]
>UniRef100_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1
           Tax=Vibrio furnissii CIP 102972 RepID=C9PLR8_VIBFU
          Length = 1097

 Score = 73.6 bits (179), Expect = 7e-12
 Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEG--AFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKD 175
           +F+ P  L++L D  R + +   G  A + G      SFCG  +   ++ I+++ DA KD
Sbjct: 41  VFKVPICLISLVDSDRQWFKSKVGLDACETGR---DISFCGHAIL--HEDILIVSDATKD 95

Query: 176 ARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVV 355
            RF +N +V   P +RFY G PL  ++G  IGTLC  D   R+F A     L   A++V 
Sbjct: 96  ERFSSNPLVTHAPHIRFYAGAPLRETSGQPIGTLCLIDSVARDFSAKEQQELREFADMVE 155

Query: 356 RHLEKDIALQLR 391
             + K+   +L+
Sbjct: 156 YEIAKEDQARLQ 167

[221][TOP]
>UniRef100_B9P3H6 GAF domain-containing protein n=1 Tax=Prochlorococcus marinus str.
           MIT 9202 RepID=B9P3H6_PROMA
          Length = 249

 Score = 73.6 bits (179), Expect = 7e-12
 Identities = 41/118 (34%), Positives = 65/118 (55%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P +L+ L D  + + +   G  +  +    WSFC  T A + +  ++I DA +D RF NN
Sbjct: 46  PISLMTLVDKDKQWFKSKIG-LQISETRRDWSFC--THAIKENSPLIIHDAFQDERFINN 102

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
            +V G P +RFY G PL  S+G+++GTLC  D KP      +  ++  L++ +V  LE
Sbjct: 103 PLVTGDPKIRFYAGFPLRNSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSKQIVSFLE 160

[222][TOP]
>UniRef100_A4C1I1 Sensor protein n=1 Tax=Polaribacter irgensii 23-P
           RepID=A4C1I1_9FLAO
          Length = 399

 Score = 73.6 bits (179), Expect = 7e-12
 Identities = 43/118 (36%), Positives = 63/118 (53%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P ALV++    + + +   G   + + P  +SFC  ++ +  D++ +I DA KD RF NN
Sbjct: 45  PIALVSIIGKNKQWFKSHHGLAAK-ETPREFSFCAHSILN-TDELFIINDATKDDRFANN 102

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
            +  G P V FY G PL +S G  +GTLC  D KP   +  +   L  LA+ VV  LE
Sbjct: 103 PLTIGAPNVVFYAGAPLNSSEGFPLGTLCVIDNKPNALNKRQQQSLKLLAKQVVNLLE 160

[223][TOP]
>UniRef100_UPI0000382D47 COG2203: FOG: GAF domain n=1 Tax=Magnetospirillum magnetotacticum
           MS-1 RepID=UPI0000382D47
          Length = 297

 Score = 73.2 bits (178), Expect = 9e-12
 Identities = 47/129 (36%), Positives = 63/129 (48%)
 Frame = +2

Query: 8   EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
           E P A+V L  D R F +   G   R + P   SFC    A   +  + IPDA  D RF 
Sbjct: 43  ETPIAVVNLVGDGRQFFKAEVGLGVR-ETPLDTSFC--RHAILEEDFLYIPDAASDPRFA 99

Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
            N +V G PG+RFY G  L  + GH +GT+C  D KP +    +   L  LA   +  +E
Sbjct: 100 GNPLVTGEPGLRFYAGALLKTAEGHPVGTVCVLDTKPHDLTERQRKGLVRLARQTMAQME 159

Query: 368 KDIALQLRA 394
              AL+ +A
Sbjct: 160 LRRALREQA 168

[224][TOP]
>UniRef100_Q8PIT5 Putative uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv.
           citri RepID=Q8PIT5_XANAC
          Length = 356

 Score = 73.2 bits (178), Expect = 9e-12
 Identities = 45/124 (36%), Positives = 63/124 (50%)
 Frame = +2

Query: 8   EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
           E   A V L D+ R + + A GA  R + P   SFC   +  R D+++++ D L D RF 
Sbjct: 43  ETQMAAVVLVDEDRQWFKSAHGA-PRSEAPRDISFCAHAIL-RPDEVLMVDDTLLDPRFH 100

Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
           +N MV G  GVRFY G PL+ S G  +G+LC  D  P      +   L  L+    + LE
Sbjct: 101 DNPMVVGSGGVRFYAGAPLVTSQGMALGSLCVFDQAPAHLREDQREALQALSRQASQLLE 160

Query: 368 KDIA 379
             +A
Sbjct: 161 LRLA 164

[225][TOP]
>UniRef100_B1XP38 Sensor protein n=1 Tax=Synechococcus sp. PCC 7002
           RepID=B1XP38_SYNP2
          Length = 412

 Score = 73.2 bits (178), Expect = 9e-12
 Identities = 43/117 (36%), Positives = 63/117 (53%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F     L++L DD R + + A+      + P   SFCG   A +   I  IPD L D R
Sbjct: 41  LFGVKIVLISLVDDCRQWFK-AKVGLAASETPRNISFCGH--AIQRADIFEIPDTLADER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
           F +N +V G P +RFY G P+ + +G+ +GTLC  D +PR+  A+   +L  LA  V
Sbjct: 98  FWDNPLVTGKPYIRFYAGHPIRSGDGYPLGTLCLIDEQPRKLTATERELLQMLAHQV 154

[226][TOP]
>UniRef100_Q2CFM6 Sensor protein n=1 Tax=Oceanicola granulosus HTCC2516
           RepID=Q2CFM6_9RHOB
          Length = 404

 Score = 73.2 bits (178), Expect = 9e-12
 Identities = 47/125 (37%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P A V++ +  R + +   G  +  + P   SFC  T+ S   + MV+PD  +D R
Sbjct: 41  LFDCPIAHVSVVEQSRQWYKSVVG-IELSEMPKDNSFCTHTIMS--GEPMVVPDLSRDPR 97

Query: 182 FCNNEMV-RGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASR-CVVLNNLAELVV 355
           F ++ MV  GGP  RFY G PL+ S+G R G+LC  D  P      R    L  L E VV
Sbjct: 98  FVDHPMVAEGGPQARFYAGVPLVLSSGFRFGSLCVLDFVPHAAPGEREMAALTALGEAVV 157

Query: 356 RHLEK 370
             LEK
Sbjct: 158 AALEK 162

[227][TOP]
>UniRef100_B9ZM74 Sensor protein n=1 Tax=Thioalkalivibrio sp. K90mix
           RepID=B9ZM74_9GAMM
          Length = 697

 Score = 73.2 bits (178), Expect = 9e-12
 Identities = 46/148 (31%), Positives = 69/148 (46%)
 Frame = +2

Query: 5   FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
           F+ P A V L D++       +G    G      SFC   + +R ++++V+ DA +DARF
Sbjct: 41  FDVPMATVTLVDEKCQCFIAPQGPLGAGT-ERSISFCAHGL-TRPNELLVVEDARQDARF 98

Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364
            +N +V G   VRFY G PL    G  +G LC  D +PR  D      L    E+    L
Sbjct: 99  SDNPLVLGETDVRFYAGIPLAPEAGLAVGNLCIIDTRPRRLDEQEVTALREFGEIATSLL 158

Query: 365 EKDIALQLRAHDNNSLAAAYGXLRRTLD 448
            + +A +   H  ++L A    L   L+
Sbjct: 159 REYLARRDLGHSRSALDAQGQRLAAVLE 186

[228][TOP]
>UniRef100_B9XKZ0 Putative GAF sensor protein n=1 Tax=bacterium Ellin514
           RepID=B9XKZ0_9BACT
          Length = 218

 Score = 73.2 bits (178), Expect = 9e-12
 Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I EAP AL+ L D+ R + +   G           SFC   +   ++ ++V+ DA KD R
Sbjct: 40  ICEAPVALITLVDENRQWFKSKVG-IDLNQTSRDISFCAHAIL--HEDVLVVADASKDKR 96

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F  N +V   P +RFY G PLI  +G  +GTLC  D KP +    +   L  L+  V+  
Sbjct: 97  FAKNPLVVSEPRIRFYAGAPLITPDGQALGTLCVLDKKPHKITPDQKRALEILSRHVMTQ 156

Query: 362 LE---KDIALQLRAHDNNSLAAAYGXLRRTL 445
           LE   + + L     D++ +       RR L
Sbjct: 157 LELRRRSLELAKTRKDHDKVLKELEAARRKL 187

[229][TOP]
>UniRef100_A1ZHX4 Serine/threonine protein kinases n=1 Tax=Microscilla marina ATCC
           23134 RepID=A1ZHX4_9SPHI
          Length = 444

 Score = 73.2 bits (178), Expect = 9e-12
 Identities = 42/138 (30%), Positives = 69/138 (50%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I   P +L++L  + + + +   G   R + P   +FC    A    ++ ++ DA KD R
Sbjct: 41  ICSTPISLMSLVAENKQWFKAKVGLEAR-ETPRELAFCAH--AIHRPELFIVEDATKDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +V G P +RFY G PL   +G  +GTLC  D +PR+   ++   L  LA   +  
Sbjct: 98  FHDNPLVTGHPDIRFYAGMPLTTPDGFSLGTLCVIDKRPRDLTEAQKTALKTLASQAIAQ 157

Query: 362 LEKDIALQLRAHDNNSLA 415
           LE  + L++      S+A
Sbjct: 158 LELRMKLRVIESKQKSIA 175

[230][TOP]
>UniRef100_A5CUL8 Putative uncharacterized protein n=1 Tax=Clavibacter michiganensis
           subsp. michiganensis NCPPB 382 RepID=A5CUL8_CLAM3
          Length = 417

 Score = 72.0 bits (175), Expect(2) = 9e-12
 Identities = 44/121 (36%), Positives = 61/121 (50%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P A + L DD   F +  + A          SFC   +A R+  I+V+PDA +DAR
Sbjct: 62  VFGVPVAEINLVDDAEQFTKSPQPAGVSLLSDRTQSFCD--VAIRSSDILVVPDATQDAR 119

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F     V G   +RFY G PL+ S G  +GTLC  D +PRE    +  +L+ +   V R 
Sbjct: 120 FAERTTVTGPRHIRFYAGRPLL-SGGQTVGTLCLVDTEPRELAPDQEKLLDEMGAWVERE 178

Query: 362 L 364
           L
Sbjct: 179 L 179

 Score = 21.2 bits (43), Expect(2) = 9e-12
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 421 LWQXSPHAGLLRPLRRAGG 477
           LW     AG+ RP R  GG
Sbjct: 202 LWPDFDLAGISRPARGVGG 220

[231][TOP]
>UniRef100_Q8YQQ8 Sensor protein n=1 Tax=Nostoc sp. PCC 7120 RepID=Q8YQQ8_ANASP
          Length = 1550

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 40/118 (33%), Positives = 58/118 (49%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P AL++L D  R + +   G  +R + P   +FC  T+     +  ++PDA  D RF  N
Sbjct: 44  PIALISLIDQNRQWFKATFG-LERRETPRDEAFCAHTILE--SEAFIVPDATADERFATN 100

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
            +V   P +RFY G PL    G+ +GTLC  D  PR     +   L  L   V++ LE
Sbjct: 101 PLVISDPKIRFYAGVPLTNPEGYSLGTLCVIDYIPRNLSFEQIEALQILGRQVIKQLE 158

[232][TOP]
>UniRef100_Q7V0A0 GAF domain n=1 Tax=Prochlorococcus marinus subsp. pastoris str.
           CCMP1986 RepID=Q7V0A0_PROMP
          Length = 250

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 41/118 (34%), Positives = 64/118 (54%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P +L+ L D  + + +   G  +  +    WSFC  T A + +  ++I DA +D RF NN
Sbjct: 47  PISLMTLVDKDKQWFKSKVG-LEINETKRDWSFC--THAIQENSPLIIQDAFQDERFINN 103

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
            +V G P +RFY G PL   +G+++GTLC  D KP      +  V+  L++ +V  LE
Sbjct: 104 PLVTGDPKIRFYAGFPLKNRDGNKLGTLCVIDRKPGNLSLKQFNVMELLSKQIVAFLE 161

[233][TOP]
>UniRef100_Q3BRB1 Putative sensor protein n=1 Tax=Xanthomonas campestris pv.
           vesicatoria str. 85-10 RepID=Q3BRB1_XANC5
          Length = 375

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 45/124 (36%), Positives = 63/124 (50%)
 Frame = +2

Query: 8   EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
           E   A V L D+ R + + A GA  R + P   SFC   +  R D+++++ D L D RF 
Sbjct: 62  ETQMAAVVLVDEDRQWFKSAHGA-PRSEAPRDISFCAHAIL-RPDEVLMVDDTLLDPRFH 119

Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
           +N MV G  GVRFY G PL+ S G  +G+LC  D  P      +   L  L+    + LE
Sbjct: 120 DNPMVVGSGGVRFYAGAPLVTSQGLALGSLCVFDQTPAHLREDQREALQALSRQASQLLE 179

Query: 368 KDIA 379
             +A
Sbjct: 180 LRLA 183

[234][TOP]
>UniRef100_B2FHL0 Putative GGDEF and GAF signalling protein n=1 Tax=Stenotrophomonas
           maltophilia K279a RepID=B2FHL0_STRMK
          Length = 356

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
 Frame = +2

Query: 20  ALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEM 199
           A V L D  R + +  +G     +     S CG  +   + QIMV+ DAL+D RF +N +
Sbjct: 47  AAVTLIDVERQWFKSIQGIDAAENLRSE-SMCGHAILQPH-QIMVVEDALQDIRFHDNPV 104

Query: 200 VRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE-KDI 376
           V G P +RFY G PLI+S+G  +GTLC  D +P+   + +   L  L+  V+  +E +  
Sbjct: 105 VTGDPHIRFYAGAPLISSDGLPLGTLCVFDAQPQHLPSDKAEALAALSRQVMLVMELRRF 164

Query: 377 ALQLRAH 397
           AL ++ H
Sbjct: 165 ALDIQKH 171

[235][TOP]
>UniRef100_C4ZL18 Response regulator receiver modulated diguanylate
           cyclase/phosphodiesterase n=1 Tax=Thauera sp. MZ1T
           RepID=C4ZL18_THASP
          Length = 737

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 44/122 (36%), Positives = 60/122 (49%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           I EAP  +++L D  R + +   G   +       SFC   +    D +  + DA  D R
Sbjct: 157 IAEAPVGVISLVDTHRQWFKARVGVEVQTTSR-SVSFCAHALLG--DGLFEVEDATLDPR 213

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F +N +VRG PG+RFY G PL+   G  +GTLC  D +PR   A+    L  LA  V   
Sbjct: 214 FADNPLVRGDPGIRFYAGMPLVMPGGEVVGTLCVIDSRPRRLGATAREALAVLARSVTDE 273

Query: 362 LE 367
           LE
Sbjct: 274 LE 275

[236][TOP]
>UniRef100_A8TQ70 Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain
           n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQ70_9PROT
          Length = 273

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 1/159 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P  L++L D  R + + A       + P   SFCG  +   +  ++V+ DA KD R
Sbjct: 41  LFRVPICLISLVDKDRQWFK-ARAGLDATETPRDISFCGHAILEHD--VLVVLDATKDER 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358
           F +N +V GGP +RFY G P+   NG+ IGT+C    + RE F       L  LA + V 
Sbjct: 98  FHDNPLVVGGPEIRFYAGAPISLPNGYNIGTVCIISPEVRETFTKDEARQLAGLAGVAV- 156

Query: 359 HLEKDIALQLRAHDNNSLAAAYGXLRRTLDCFDHCVALV 475
                I+++    + +   +    L+R L+  D  VAL+
Sbjct: 157 ---SAISVRALRREMDRERSEKERLQRALESVDQPVALL 192

[237][TOP]
>UniRef100_A0ZB66 Sensor protein n=1 Tax=Nodularia spumigena CCY9414
           RepID=A0ZB66_NODSP
          Length = 1508

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 38/118 (32%), Positives = 60/118 (50%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P ALV+L D  R + +   G  +  + P   +FC   +  ++  + ++PD   D RF +N
Sbjct: 44  PIALVSLVDTNRQWFKSKVG-LEAPETPRDLAFCAHAILQKD--VFIVPDTTTDKRFADN 100

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
            +V   P +RFY G PL  + G+ +GTLC  D  PR   + +   L  L   V++ LE
Sbjct: 101 PLVTSDPNIRFYAGVPLTNAEGYSLGTLCVIDRVPRNLTSEQVEALRILGNQVIKQLE 158

[238][TOP]
>UniRef100_A7TD30 Predicted protein (Fragment) n=1 Tax=Nematostella vectensis
           RepID=A7TD30_NEMVE
          Length = 138

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 37/96 (38%), Positives = 54/96 (56%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P ALV+L D  R + +   G  +  + P   +FC   + +R  ++ ++PDA KD RF +N
Sbjct: 45  PIALVSLIDSNRQWFKSRYG-LEATETPRDLAFCAHAI-NRPYELFIVPDATKDKRFHDN 102

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR 301
            +  G P V+FY G PL    G+ +GTLC  D KPR
Sbjct: 103 PLTTGDPNVKFYAGVPLNTKEGYSLGTLCVIDTKPR 138

[239][TOP]
>UniRef100_UPI0001693532 histidine kinase-response regulator hybrid protein n=1
           Tax=Xanthomonas oryzae pv. oryzicola BLS256
           RepID=UPI0001693532
          Length = 860

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 46/119 (38%), Positives = 58/119 (48%)
 Frame = +2

Query: 11  APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190
           AP ALV+L D  R + +   G   + + P   SFC  + A    ++M +PDA  D RF N
Sbjct: 48  APMALVSLLDANRQWFKARCGTDLK-ETPRSASFC--SHAIMGTELMEVPDAEADPRFVN 104

Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
           N +V   PGVR Y G PLI   G+  GTLC     PR  D  +   L  LA      LE
Sbjct: 105 NPLVVAAPGVRSYVGVPLIGREGYAYGTLCTLSTTPRVLDEQQKQALIRLAHQAANQLE 163

[240][TOP]
>UniRef100_C6XAD7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1
           Tax=Methylovorus sp. SIP3-4 RepID=C6XAD7_METSD
          Length = 640

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 44/125 (35%), Positives = 64/125 (51%)
 Frame = +2

Query: 14  PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
           P AL++L D  R + +   G  +  + P   +FC   +       MV+ DAL D RF +N
Sbjct: 45  PIALISLVDTDRQWFKSRIGV-EAEESPRDVAFCAHAILQTKP--MVVNDALLDERFADN 101

Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373
            MV   P +RFY G P+  + G+ +GTLC  D +PRE       +L  LA+LV + +   
Sbjct: 102 PMVLQFPNIRFYAGIPIRTTAGYALGTLCAIDAQPRELSKHEMEILTCLADLVSKEIRLR 161

Query: 374 IALQL 388
            AL L
Sbjct: 162 EALAL 166

[241][TOP]
>UniRef100_B7KRQ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
           sensor(S) n=1 Tax=Methylobacterium chloromethanicum CM4
           RepID=B7KRQ5_METC4
          Length = 1423

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 43/121 (35%), Positives = 65/121 (53%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P A V+L  +     +   G       P   SFC +T+ S   +++V+ DA +D R
Sbjct: 39  LFDVPIAYVSLVGETEQRFKGKCGLGAEAT-PREISFCTYTILSH--EVLVVEDATQDER 95

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F  N +V G P +RFY G PL+ S+G  +G+LC  D   R F A +   L +LA++VV  
Sbjct: 96  FSANPLVIGKPHIRFYAGAPLVLSSGIHLGSLCLIDRVSRPFSAEQQERLRDLAQIVVVQ 155

Query: 362 L 364
           L
Sbjct: 156 L 156

[242][TOP]
>UniRef100_B0UPP1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
           sensor(S) n=1 Tax=Methylobacterium sp. 4-46
           RepID=B0UPP1_METS4
          Length = 740

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P A V L  +   +++   G       P   SFC  T+ S  D++MV+PDA +D R
Sbjct: 54  LFGTPWAAVTLIGEDTQWLKARHG-LDLPRTPRSVSFCTHTIES--DEVMVVPDASRDPR 110

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358
           F +N +VRG   +RFY G PL+  +G RIG +C  D  PR   DA+    L +LA L++ 
Sbjct: 111 FRDNPLVRGDLALRFYAGAPLVTPSGARIGAICVLDHAPRPALDAAGRGRLADLARLMMT 170

Query: 359 HLE 367
            L+
Sbjct: 171 QLD 173

[243][TOP]
>UniRef100_A1WW32 Sensor protein n=1 Tax=Halorhodospira halophila SL1
           RepID=A1WW32_HALHL
          Length = 437

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 41/122 (33%), Positives = 62/122 (50%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF+ P A ++L +  R + + A G     + P   +FC   + + +   +V+ D   D R
Sbjct: 41  IFDVPIAFISLIERERQWFKAARGLGIE-ETPREIAFCNCVIQTGDP--LVVTDTHADPR 97

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
           F ++ +V G P +RFY G PL+   G RIGTLC  D + R    +    L  LAE+VV  
Sbjct: 98  FADHPLVTGPPHLRFYAGVPLVVEGGARIGTLCLGDRQARTLSDAELATLQELAEVVVDE 157

Query: 362 LE 367
            E
Sbjct: 158 FE 159

[244][TOP]
>UniRef100_Q0FTL1 Putative signal transduction histidine kinase with GAF domain n=1
           Tax=Roseovarius sp. HTCC2601 RepID=Q0FTL1_9RHOB
          Length = 394

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 1/129 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           + + P AL++L D+ R + R   G F+  + P   S C   +    D I+ I D L DAR
Sbjct: 41  MLDMPVALISLVDEDRQWFRARHG-FEPSETPLEQSICAHAILG--DDILEIEDTLDDAR 97

Query: 182 FCNNEMVRGGPG-VRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVR 358
             +N +  G    +R+Y G PLI  +GH IG+LC  D KPR+   ++  +L  ++  V+R
Sbjct: 98  TADNPLCCGVLAEMRYYAGAPLITRSGHSIGSLCVLDTKPRKLTPAQRQLLMVMSRQVIR 157

Query: 359 HLEKDIALQ 385
            L+   AL+
Sbjct: 158 QLDLQRALK 166

[245][TOP]
>UniRef100_D0D1R8 Signal transduction histidine kinase n=1 Tax=Citreicella sp. SE45
           RepID=D0D1R8_9RHOB
          Length = 390

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           + + P AL++L D+ R + R   G F+  + P   S C  + A   D I+ I D L D R
Sbjct: 41  MLDMPVALISLVDENRQWFRARHG-FEPAETPLGQSIC--SHAILEDDILEIEDTLLDLR 97

Query: 182 FCNNEMVRGG-PGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVR 358
             +N +  G    +RFY G PL+   GHRIG+LC  D +PR+  A++  +L  +A  V+R
Sbjct: 98  SADNPLCCGLLADMRFYAGAPLVTRTGHRIGSLCVLDRRPRKLTAAQRKLLTVMAGQVMR 157

Query: 359 HLEKDIALQ 385
            L+ +  L+
Sbjct: 158 QLDLERTLK 166

[246][TOP]
>UniRef100_B4UYH5 Magnesium or manganese-dependent protein phosphatase n=1
           Tax=Streptomyces sp. Mg1 RepID=B4UYH5_9ACTO
          Length = 441

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 48/148 (32%), Positives = 70/148 (47%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           IF+AP A VA+ D  R++ +   G     + P          A  +DQ  V+ DAL D R
Sbjct: 49  IFDAPMATVAIVDSDRVWFKATHGLEGVREIPRDPGLTA--CAVPHDQPYVVTDALTDPR 106

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
                +V G PGVRFY   P+I  +G+R+G++   D +PR     +   L +LA LV+  
Sbjct: 107 TAAGPLVHGWPGVRFYAAAPIITVDGYRLGSVNVLDTRPRRPTDVQIATLQDLAALVMDE 166

Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRRTL 445
           LE  ++ +          A    L RTL
Sbjct: 167 LELRLSARRTVAAERERRADAERLARTL 194

[247][TOP]
>UniRef100_A3SGP0 Sensor protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SGP0_9RHOB
          Length = 355

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 45/118 (38%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
 Frame = +2

Query: 32  LFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEMV-RG 208
           +++D +I +  A G  ++G+ P R S C +T+ S  D+ M++ D   D +F N+ MV  G
Sbjct: 1   MYEDSQI-LPSAVG-IEKGEVPRRISLCSFTIMS--DEPMIVSDLSLDPKFSNHPMVVEG 56

Query: 209 GPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVVRHLEKDIA 379
           GP  RFY G PL+ S+G R+G+LC  DVKP +  + R + +L  L + VV   E+  A
Sbjct: 57  GPEYRFYVGVPLVLSSGFRLGSLCALDVKPHDKPSVRQIALLEELGKAVVAIFEQHSA 114

[248][TOP]
>UniRef100_B7FUD4 Light histidine kinase n=1 Tax=Phaeodactylum tricornutum CCAP
           1055/1 RepID=B7FUD4_PHATR
          Length = 850

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F+ P ALV+L D  RI+     G  +    P + SFC   + S N +  ++PDA KD+R
Sbjct: 108 MFDVPIALVSLVDLGRIWCISNRGLGEVRQIPRKDSFCAHAVLS-NSKSFIVPDASKDSR 166

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLN-------NL 340
           F  N +V  G G+RFY G PL     +RIG  C    KPR    S   ++         +
Sbjct: 167 FSTNPLVTEG-GIRFYGGAPLETPENYRIGNFCLLGTKPRPEGLSEAELMTLVDFAAMAV 225

Query: 341 AELVVRHLEKDIALQ---LRAHDNNSLAAAYGXLRRTLDCFDHCVAL 472
             LV R   +D  ++   + AH  + L      L+ +L+  +  V+L
Sbjct: 226 KVLVDRRYRRDTEIKQDLIVAHTAHDLITPLTGLQMSLNLLNEDVSL 272

[249][TOP]
>UniRef100_Q4P540 Putative uncharacterized protein n=1 Tax=Ustilago maydis
            RepID=Q4P540_USTMA
          Length = 2065

 Score = 72.4 bits (176), Expect = 1e-11
 Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
 Frame = +2

Query: 107  SFCGWTMASRNDQIMVIPDALKDARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFA 286
            SFC   +   +D+ +VI DA KD RF  N +V+G P +RFY G+PL  S+G  IG+LC  
Sbjct: 860  SFCSHAILQDSDEPIVILDAAKDWRFSGNPLVQGSPDIRFYAGSPLRTSDGLNIGSLCLI 919

Query: 287  DVKPR-EFDASRCVVLNNLAELVVRHLE 367
            D KPR +F   +   L   + +V+R +E
Sbjct: 920  DDKPRTDFGPRQRHTLREFSRVVMREME 947

[250][TOP]
>UniRef100_C1D3W6 Putative response regulator n=1 Tax=Deinococcus deserti VCD115
           RepID=C1D3W6_DEIDV
          Length = 592

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
 Frame = +2

Query: 2   IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
           +F  P A++ L D+++I+ +   G  K G      + C  T+ S   Q+MV+PDA ++ R
Sbjct: 40  LFSVPYAMINLIDEQQIWAKACFGT-KTGSLTREHAPCVRTIEST--QVMVVPDARQNHR 96

Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358
           F ++  V    G+RFY G PL+  +G+ IGTLC  D +PR          L +LA LV+ 
Sbjct: 97  FASHG-VMAEHGLRFYAGAPLVTHDGYSIGTLCLLDEQPRTGLSDEESSTLQDLAALVMD 155

Query: 359 HLEKDIALQLRAHDNNSLAAAYGXLRRTLDCFDHCVAL 472
            LE  +A    A D  + +     +    D   H  A+
Sbjct: 156 ELELRLAQLTLARDAKAKSQMLTRMTGAADHAQHLAAV 193