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[1][TOP] >UniRef100_A8IGG5 Mixed lineage protein kinase n=1 Tax=Chlamydomonas reinhardtii RepID=A8IGG5_CHLRE Length = 785 Score = 333 bits (853), Expect = 5e-90 Identities = 159/160 (99%), Positives = 159/160 (99%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR Sbjct: 40 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 99 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH Sbjct: 100 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 159 Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRRTLDCFDHCVALVDT 481 LEKDIALQLRAHDNNSLAAAYG LRRTLDCFDHCVALVDT Sbjct: 160 LEKDIALQLRAHDNNSLAAAYGNLRRTLDCFDHCVALVDT 199 [2][TOP] >UniRef100_A8I2K3 FhlA domain-contained protein kinase (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8I2K3_CHLRE Length = 951 Score = 110 bits (276), Expect = 4e-23 Identities = 63/164 (38%), Positives = 90/164 (54%), Gaps = 4/164 (2%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFK-RGDFPWRWSFCGWTMASRND--QIMVIPDALK 172 +F+ P ALVA + IFIR A K D WR+S W M + +D ++++PDA Sbjct: 413 VFQLPVALVAAYRSANIFIRST--ALKLTDDDQWRYSLAQWAMLNVHDLRDVLLVPDATL 470 Query: 173 DARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352 D RF V P VRF+C +PL +S G +GTLC AD + R + + +V+NNL LV Sbjct: 471 DDRFRTQYCVANEPRVRFFCASPLRSSTGELLGTLCMADFQERMLEPANLLVVNNLQSLV 530 Query: 353 VRHLEKDIALQLRAHDNN-SLAAAYGXLRRTLDCFDHCVALVDT 481 +R LE+D+AL +N + + R LD F+ C+ VDT Sbjct: 531 IRQLERDMALAAERLENEVATEQLQQEMMRALDHFEKCIMFVDT 574 [3][TOP] >UniRef100_A8IR08 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8IR08_CHLRE Length = 147 Score = 105 bits (262), Expect = 2e-21 Identities = 50/114 (43%), Positives = 74/114 (64%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P ALV+L D R + + +G R + SFC WT+ + +++V+ +AL+D R Sbjct: 35 VFKCPIALVSLVDKDRQWFKSVQGLPVR-QTDRKSSFCAWTLLPEHPEVLVVENALEDIR 93 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLA 343 F NN +V G P +RFY G PL+A+NG R+G+LC D KPR+FDA C +L N+A Sbjct: 94 FRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQFDAESCNMLANMA 147 [4][TOP] >UniRef100_A3YZB7 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YZB7_9SYNE Length = 337 Score = 103 bits (258), Expect = 5e-21 Identities = 54/122 (44%), Positives = 76/122 (62%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF+ P AL++L D R + EG + + P +FC T+A+ D++MV+PDAL+D R Sbjct: 50 IFDMPIALISLVDHDRQWFLSREG-LEVSETPREVAFCAHTIAT--DEVMVVPDALQDER 106 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V PG+RFY G PL +GH +GTLC D KPREF + L LA+LV+R Sbjct: 107 FSSNPLVLSPPGIRFYAGAPLRTKDGHNLGTLCVIDQKPREFSPEQKQQLRMLADLVMRE 166 Query: 362 LE 367 +E Sbjct: 167 IE 168 [5][TOP] >UniRef100_A4VFL1 Sensor protein n=1 Tax=Pseudomonas stutzeri A1501 RepID=A4VFL1_PSEU5 Length = 793 Score = 95.9 bits (237), Expect = 1e-18 Identities = 54/137 (39%), Positives = 78/137 (56%) Frame = +2 Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187 + P AL++L DDRR + + G + P SFC +T+ +QI +PDAL+D RF Sbjct: 42 DTPIALISLVDDRRQWFKSRVG-LDVSETPRDISFCTYTITG--EQIFEVPDALQDPRFR 98 Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 +N +V+G P +RFY GTPL + +GH +GTLC D KPR + + +L L V+R E Sbjct: 99 DNPLVQGDPHIRFYAGTPLTSPDGHNLGTLCVIDRKPRRLSSEQREILERLGRQVIRLFE 158 Query: 368 KDIALQLRAHDNNSLAA 418 + L AH + AA Sbjct: 159 Q----HLLAHRHAEQAA 171 [6][TOP] >UniRef100_B5IIP1 GAF sensor diguanylate cyclase n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IIP1_9CHRO Length = 364 Score = 95.9 bits (237), Expect = 1e-18 Identities = 50/122 (40%), Positives = 72/122 (59%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 + E P AL++L D R + G + P +FC T+ + +V+PDA D R Sbjct: 42 VLETPIALISLIDKNRQWFLARHG-LDITETPREQAFCAHTITE--GEPLVVPDARTDPR 98 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 FC+N +V G PGVRFY G PL + +GH +G+LC D +PR A++ +L +LA+LVVR Sbjct: 99 FCSNPLVLGEPGVRFYAGAPLASPDGHNLGSLCVIDRQPRRLSAAQVKLLQDLADLVVRE 158 Query: 362 LE 367 LE Sbjct: 159 LE 160 [7][TOP] >UniRef100_B8KKX5 Diguanylate cyclase (Ggdef domain) n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KKX5_9GAMM Length = 334 Score = 95.1 bits (235), Expect = 2e-18 Identities = 54/134 (40%), Positives = 82/134 (61%), Gaps = 1/134 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P +LV+L D R + + A+G + P SFCG +A D+++ +P+AL D R Sbjct: 41 MFGVPISLVSLVDSERQWFKSAQG-LDATETPRDISFCGHAIAG--DELLYVPNALDDKR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PL+A+NGH++GTLC D +PRE D ++L +LA +V Sbjct: 98 FHDNPLVTAEPHIRFYAGNPLMAANGHKVGTLCLIDSEPRELDDEDKLLLEDLAVMV--- 154 Query: 362 LEKDIA-LQLRAHD 400 E++IA LQ+ D Sbjct: 155 -EQEIASLQMATLD 167 [8][TOP] >UniRef100_Q4ZNM1 EAL:GAF n=1 Tax=Pseudomonas syringae pv. syringae B728a RepID=Q4ZNM1_PSEU2 Length = 607 Score = 92.0 bits (227), Expect = 2e-17 Identities = 51/121 (42%), Positives = 70/121 (57%), Gaps = 1/121 (0%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184 FEAP AL+++ D+ R F R G K + P SFC +T+ S D + IPDA DARF Sbjct: 43 FEAPIALISIVDEHRQFFRARVG-LKARETPRNVSFCAYTILS--DTLFEIPDATLDARF 99 Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRH 361 NN +V G P +R+Y G PLI +G +G+LC D KPRE + +L A LV++ Sbjct: 100 VNNGLVTGHPDIRYYAGAPLITDDGIALGSLCVIDTKPREPMSEYQTQMLKRFASLVMKR 159 Query: 362 L 364 + Sbjct: 160 I 160 [9][TOP] >UniRef100_A4WR53 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides ATCC 17025 RepID=A4WR53_RHOS5 Length = 334 Score = 92.0 bits (227), Expect = 2e-17 Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 5/154 (3%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I+ P A + L DD+R++++ GA + D P +FC T+ R+++++ I D L D R Sbjct: 38 IYAVPMAAMTLIDDQRLWLKSHSGATEV-DIPRCHAFCDQTI--RDNKVVQIVDTLSDPR 94 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N V G P VR Y G PL +GH IGT+C AD PR++ A VL +LA L V Sbjct: 95 FRDNPYVVGAPHVRSYLGAPLTTPDGHNIGTICIADTIPRDYTAVDREVLADLARLAVIQ 154 Query: 362 LEKDIALQLRAHDNNSLAAA-----YGXLRRTLD 448 LE L+L+A ++ AA LRR +D Sbjct: 155 LE----LRLQATEDQQTTAATRRAFLSVLRRAMD 184 [10][TOP] >UniRef100_B2JFQ6 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia phymatum STM815 RepID=B2JFQ6_BURP8 Length = 319 Score = 91.3 bits (225), Expect = 3e-17 Identities = 52/133 (39%), Positives = 72/133 (54%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P A V L D R + + G + + P SFCG +A +D + ++ DA D R Sbjct: 41 LFGVPIAAVTLVDSHRQWFKSHPG-LEASETPRDVSFCGHAIA--DDDLFLVNDASLDVR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +RFY G PL SNG R+GTLC DVKPR D V+L +LA + + Sbjct: 98 FADNPLVTGDPNIRFYAGYPLTVSNGSRLGTLCLIDVKPRALDDEERVLLRDLARMAEQE 157 Query: 362 LEKDIALQLRAHD 400 + A+QL D Sbjct: 158 I---AAVQLATTD 167 [11][TOP] >UniRef100_C6NKW0 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Pectobacterium wasabiae WPP163 RepID=C6NKW0_9ENTR Length = 722 Score = 90.9 bits (224), Expect = 4e-17 Identities = 58/124 (46%), Positives = 74/124 (59%), Gaps = 2/124 (1%) Frame = +2 Query: 2 IFEAPAALVALFD-DRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDA 178 IF AP LV+L + +R++F F + P SFC T+ + +IMV+PDALKD Sbjct: 41 IFNAPIVLVSLVEAERQLFAASVGVPFC--ETPRDISFCAHTILKK--KIMVVPDALKDV 96 Query: 179 RFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVV 355 RF NN +V G P +RFY G PLI S+GH IGTLC D+KPR R L +LA LV+ Sbjct: 97 RFKNNPLVVGIPYIRFYAGIPLITSSGHAIGTLCIIDLKPRAAFTKRDEHNLQDLASLVM 156 Query: 356 RHLE 367 LE Sbjct: 157 DKLE 160 [12][TOP] >UniRef100_Q0G2R6 Putative signal transduction histidine kinase with GAF domain n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G2R6_9RHIZ Length = 694 Score = 90.5 bits (223), Expect = 5e-17 Identities = 57/151 (37%), Positives = 82/151 (54%), Gaps = 2/151 (1%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P ALV+L D R + + A F+ + P S C ++SR+ ++VIPD KD R Sbjct: 64 LFDVPVALVSLVDRHRQWFK-ARSGFELSETPIAQSVCAHALSSRD--VLVIPDLTKDLR 120 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADV--KPREFDASRCVVLNNLAELVV 355 +N +V G P +RFY G PL+ +GH +GTLC DV +P+ F ++ L LA+ VV Sbjct: 121 TASNTLVTGEPKIRFYAGAPLVTPDGHVLGTLCIIDVVSRPQGFSVNQAEDLKKLADQVV 180 Query: 356 RHLEKDIALQLRAHDNNSLAAAYGXLRRTLD 448 LE +A+ R DN AA R D Sbjct: 181 ALLEMRLAVGQR--DNLLRQAAEARTRAEED 209 [13][TOP] >UniRef100_Q4KBH0 Diguanylate cyclase, putative n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KBH0_PSEF5 Length = 322 Score = 90.1 bits (222), Expect = 7e-17 Identities = 52/137 (37%), Positives = 76/137 (55%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P ALV+L D R + + G + SFCG + DQI+ +PDA D R Sbjct: 41 LFNVPIALVSLVDADRQWFKSCVG-LDVSETSRDISFCGHAILG--DQILTVPDAGLDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G PG+RFY G PL +NG ++GTLC D+KPR+ D +L +LA + + Sbjct: 98 FHDNPLVVGAPGIRFYAGCPLTVTNGSKLGTLCLIDIKPRDLDDEDRALLRDLARMAEQE 157 Query: 362 LEKDIALQLRAHDNNSL 412 L A+Q+ + D +L Sbjct: 158 L---AAVQMASMDELTL 171 [14][TOP] >UniRef100_C5AGJ9 Diguanylate cyclase n=1 Tax=Burkholderia glumae BGR1 RepID=C5AGJ9_BURGB Length = 324 Score = 90.1 bits (222), Expect = 7e-17 Identities = 55/134 (41%), Positives = 72/134 (53%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF+ P ALV+L D R + + G R + SFC + S D +VIPDA D R Sbjct: 41 IFDVPIALVSLIDANRQWFKSCFGLEAR-ETSRDVSFCAHAILS--DDTLVIPDATLDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F N +V G PG+RFY G PL +G +GTLC D +PRE DA+ L +LA L R Sbjct: 98 FAGNPLVTGAPGIRFYAGHPLALPDGTNLGTLCLIDTRPREIDATDLSHLRDLANLAERE 157 Query: 362 LEKDIALQLRAHDN 403 + A+QL D+ Sbjct: 158 V---AAVQLATLDS 168 [15][TOP] >UniRef100_Q6D4F7 Putative signaling protein n=1 Tax=Pectobacterium atrosepticum RepID=Q6D4F7_ERWCT Length = 722 Score = 89.7 bits (221), Expect = 9e-17 Identities = 57/124 (45%), Positives = 74/124 (59%), Gaps = 2/124 (1%) Frame = +2 Query: 2 IFEAPAALVALFD-DRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDA 178 IF AP LV+L + +R++F F + P SFC T+ + +IMV+PDALKDA Sbjct: 41 IFSAPIVLVSLVEAERQLFAASVGVPFC--ETPRDISFCAHTILKK--KIMVVPDALKDA 96 Query: 179 RFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVV 355 RF NN +V G P +RFY G PLI +GH IGTLC D+KPR R + +LA LV+ Sbjct: 97 RFKNNPLVVGIPYIRFYAGIPLITPSGHAIGTLCIIDLKPRTTFTKRDEHNMQDLASLVM 156 Query: 356 RHLE 367 LE Sbjct: 157 DKLE 160 [16][TOP] >UniRef100_C9P933 Signal transduction histidine kinase n=1 Tax=Vibrio metschnikovii CIP 69.14 RepID=C9P933_VIBME Length = 642 Score = 89.7 bits (221), Expect = 9e-17 Identities = 48/117 (41%), Positives = 69/117 (58%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF P AL++L D R + + +G + P SFCG + N +I VI +AL D R Sbjct: 41 IFSVPIALISLVDRDRQWFKSRQGLDAQ-QTPREISFCGHAIL--NSEIFVIENALVDQR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352 FC+N +V G P +RFY G PL ++ G+RIGTLC D +P+ F + + +L +LA V Sbjct: 98 FCDNPLVMGAPDIRFYAGAPLHSTKGYRIGTLCLIDSQPQSFSSKQRSMLKDLAATV 154 [17][TOP] >UniRef100_A2VQK9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Burkholderia cenocepacia PC184 RepID=A2VQK9_9BURK Length = 335 Score = 89.7 bits (221), Expect = 9e-17 Identities = 49/121 (40%), Positives = 67/121 (55%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P ALV+L D+ R + + G P SFC + S + MVI DAL D R Sbjct: 53 LFDVPIALVSLVDENRQWFKSHAG-LDATQTPRDVSFCAHALLSGDT--MVIQDALNDDR 109 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G PG+RFY G PL A NG +GTLC D +PR +A +L +LA + R Sbjct: 110 FHDNPLVTGTPGIRFYAGRPLTAPNGAPVGTLCLIDTRPRSLEADELALLGDLAHMTERE 169 Query: 362 L 364 + Sbjct: 170 I 170 [18][TOP] >UniRef100_B9KK71 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KK71_RHOSK Length = 336 Score = 89.4 bits (220), Expect = 1e-16 Identities = 52/140 (37%), Positives = 83/140 (59%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I+ P A+++L D R++++ +G +R + P +FC +A R +++ I DA D R Sbjct: 38 IYAVPLAVMSLIDGDRLWVKSVQGGERR-EVPRCDTFCD--VAIRGKKVLQIVDAQSDPR 94 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 + +N VRG PG+R Y G PL +G+ IGTLC D PR++ + VL NLA+L V H Sbjct: 95 YRDNPYVRGEPGMRSYLGAPLTTPDGYNIGTLCVIDTIPRDYTSVDREVLANLAKLAVIH 154 Query: 362 LEKDIALQLRAHDNNSLAAA 421 LE L+L+A ++ +A+ Sbjct: 155 LE----LRLQATEDQQTSAS 170 [19][TOP] >UniRef100_A3PL62 Diguanylate cyclase with GAF sensor n=2 Tax=Rhodobacter sphaeroides RepID=A3PL62_RHOS1 Length = 336 Score = 89.4 bits (220), Expect = 1e-16 Identities = 52/140 (37%), Positives = 83/140 (59%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I+ P A+++L D R++++ +G +R + P +FC +A R +++ I DA D R Sbjct: 38 IYAVPLAVMSLIDGDRLWVKSVQGGERR-EVPRCDTFCD--VAIRGKKVLQIVDAQSDPR 94 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 + +N VRG PG+R Y G PL +G+ IGTLC D PR++ + VL NLA+L V H Sbjct: 95 YRDNPYVRGEPGMRSYLGAPLTTPDGYNIGTLCVIDTIPRDYTSVDREVLANLAKLAVIH 154 Query: 362 LEKDIALQLRAHDNNSLAAA 421 LE L+L+A ++ +A+ Sbjct: 155 LE----LRLQATEDQQTSAS 170 [20][TOP] >UniRef100_A1S6Z8 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella amazonensis SB2B RepID=A1S6Z8_SHEAM Length = 327 Score = 89.4 bits (220), Expect = 1e-16 Identities = 50/122 (40%), Positives = 68/122 (55%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P L++L D R + + G + + SFCG + + I VI DAL+D R Sbjct: 41 LFDVPICLISLVDSDRQWFKSCIG-LSQSETRRDISFCGHAIMQAD--IFVIEDALEDLR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +RFY G PL SNGHR+GTLC D K R F+ L +L +LVV Sbjct: 98 FADNPLVTGEPHIRFYAGYPLTLSNGHRVGTLCIIDRKARRFEPEDYCDLEDLGKLVVSE 157 Query: 362 LE 367 LE Sbjct: 158 LE 159 [21][TOP] >UniRef100_B2UI26 Diguanylate cyclase with GAF sensor n=2 Tax=Ralstonia pickettii RepID=B2UI26_RALPJ Length = 348 Score = 89.0 bits (219), Expect = 2e-16 Identities = 49/117 (41%), Positives = 69/117 (58%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+AP LV+L D +R + + G R + SFCG +A DQ++VIPD D R Sbjct: 41 VFDAPIVLVSLIDAQRQWFKSCIGLNVR-ETGRDISFCGHAVAE--DQMLVIPDTKADPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352 F +N +V G P +RFY G P+ +G+ +GTLC D KPR FD + +LN+LA V Sbjct: 98 FADNPLVTGAPHIRFYAGRPVRNLSGYAVGTLCVLDKKPRSFDQAERELLNDLASWV 154 [22][TOP] >UniRef100_B0RTT3 Signaling protein n=3 Tax=Xanthomonas campestris pv. campestris RepID=B0RTT3_XANCB Length = 618 Score = 89.0 bits (219), Expect = 2e-16 Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 1/117 (0%) Frame = +2 Query: 20 ALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEM 199 ALV+L D+ R + + G + + P + +FC + R+D ++VIPDAL D RFCNN + Sbjct: 55 ALVSLVDEHRQWFKARVG-LEAPETPRKHAFCAHAL--RSDDVLVIPDALLDPRFCNNPL 111 Query: 200 VRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRHLE 367 V G P +RFY G PL +GH IGTLC PR DA + + L L +L V +E Sbjct: 112 VLGAPHIRFYAGAPLKLRDGHTIGTLCVIGTSPRAGLDAEQRIQLEGLRDLAVLRVE 168 [23][TOP] >UniRef100_UPI00016938B6 putative signal transduction protein n=1 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=UPI00016938B6 Length = 582 Score = 88.6 bits (218), Expect = 2e-16 Identities = 44/119 (36%), Positives = 69/119 (57%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P ALV+L D+RR + + G + P +FC A + D +M +PDA D RFC+N Sbjct: 49 PIALVSLVDERRQWCKANIGLPGVSETPRELAFCAH--AIQGDAVMEVPDAPADPRFCDN 106 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEK 370 +V PG+R+Y G P++ S+G R+GT+C D +PR + ++ L LA++ LE+ Sbjct: 107 ALVTDAPGIRYYAGAPIVLSDGVRVGTVCVIDQRPRALEPAQLQALQQLAKVAAEGLEQ 165 [24][TOP] >UniRef100_Q3KE87 Putative GGDEF/GAF domain sensory box protein n=1 Tax=Pseudomonas fluorescens Pf0-1 RepID=Q3KE87_PSEPF Length = 321 Score = 88.6 bits (218), Expect = 2e-16 Identities = 49/137 (35%), Positives = 76/137 (55%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P ALV L D R + + G + P SFC + D++M++PDA +D R Sbjct: 41 LFNVPIALVTLVDKERQWFKSCVG-LDTTETPRSVSFCAHAIL--RDELMLVPDAREDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +RFY G PL +G+++GTLC D KPR+ D +L +LA + + Sbjct: 98 FHDNPLVTGEPNIRFYAGYPLTVPSGNKMGTLCLIDTKPRDLDEEERALLRDLAGMAEQE 157 Query: 362 LEKDIALQLRAHDNNSL 412 L +A+Q+ + D +L Sbjct: 158 L---MAVQMASMDELTL 171 [25][TOP] >UniRef100_B4E8Q7 Putative cyclic-di-GMP signaling protein n=1 Tax=Burkholderia cenocepacia J2315 RepID=B4E8Q7_BURCJ Length = 323 Score = 88.2 bits (217), Expect = 3e-16 Identities = 48/121 (39%), Positives = 66/121 (54%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P ALV+L D+ R + + G P SFC + + + MVI DAL D R Sbjct: 41 LFDVPIALVSLVDENRQWFKSRAG-LDATQTPRDVSFCAHALLAGDT--MVIQDALNDDR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G PG+RFY G PL A NG IGTLC D +PR + +L +LA + R Sbjct: 98 FHDNPLVTGAPGIRFYAGRPLTAPNGAPIGTLCLIDTRPRSLEPDELALLGDLAHMTERE 157 Query: 362 L 364 + Sbjct: 158 I 158 [26][TOP] >UniRef100_A7MPS7 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC BAA-894 RepID=A7MPS7_ENTS8 Length = 323 Score = 88.2 bits (217), Expect = 3e-16 Identities = 46/117 (39%), Positives = 68/117 (58%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F AP AL++L D +++ +GA + P R SFCG T+ S ++I DAL D R Sbjct: 41 LFNAPVALISLVDQEQLWFVSCDGAEPK-PIPRRVSFCGHTILSNAP--LIITDALSDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352 FC+N +V G P +RFY G P+ +G G+LC D +PR F + +L +LA +V Sbjct: 98 FCDNPLVNGPPHIRFYAGCPVRLPDGATAGSLCIIDTEPRAFSEADAHLLRDLAAIV 154 [27][TOP] >UniRef100_C5V279 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Gallionella ferruginea ES-2 RepID=C5V279_9PROT Length = 462 Score = 88.2 bits (217), Expect = 3e-16 Identities = 43/122 (35%), Positives = 71/122 (58%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I P A ++L D+ R + + G + + P +FC T+ + + M++P+ L+D R Sbjct: 41 ICHTPFAAISLIDEHRQWFKAIVGV-EVSETPRDVAFCAHTILQQ--ETMIVPNTLEDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 FC+N V GG +RFY G PL+ +G+R+GTLC D +PR+ A + + LA+ V+ H Sbjct: 98 FCDNPFVEGGLNLRFYAGVPLVTESGYRLGTLCVFDQQPRQLSAEQLDAIKTLADSVMAH 157 Query: 362 LE 367 L+ Sbjct: 158 LD 159 [28][TOP] >UniRef100_A6F4L6 Sensor protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F4L6_9ALTE Length = 815 Score = 88.2 bits (217), Expect = 3e-16 Identities = 46/116 (39%), Positives = 69/116 (59%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184 F P ALV+L DD+R + + +G R + P SFCG + S D++ ++ D +D+RF Sbjct: 42 FGVPIALVSLVDDKRQWFKSCQGLEAR-ETPRDISFCGHAILS--DRLFIVEDTHEDSRF 98 Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352 +N +V G P +RFY G L + +G+R+GTLC D +PR D + V+L LA V Sbjct: 99 ADNPLVTGPPHIRFYAGAQLHSHDGYRLGTLCIIDTRPRTLDHDQRVLLEELARCV 154 [29][TOP] >UniRef100_UPI000182674C hypothetical protein ENTCAN_02317 n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=UPI000182674C Length = 321 Score = 87.8 bits (216), Expect = 3e-16 Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 1/116 (0%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDF-PWRWSFCGWTMASRNDQIMVIPDALKDAR 181 F+ P A+V L D+ + ++ A+G K D P SFCG T+ ++ +V+ D L+D R Sbjct: 42 FQVPLAMVNLIDEHSLIVKSADG--KAPDVVPRHISFCGHTILG--EKPLVVGDMLQDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAEL 349 F +N +V G P VRFY G PL NG +G+LC D PREF+A+ VL++L+ L Sbjct: 98 FADNPLVAGEPNVRFYAGFPLRLRNGASVGSLCLIDYAPREFNAADLAVLSDLSAL 153 [30][TOP] >UniRef100_A4WAF7 Diguanylate cyclase with GAF sensor n=1 Tax=Enterobacter sp. 638 RepID=A4WAF7_ENT38 Length = 321 Score = 87.8 bits (216), Expect = 3e-16 Identities = 50/116 (43%), Positives = 62/116 (53%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P A V L D+R EGA G P SFC T+ ++ +V+ D +D R Sbjct: 41 LFNVPVATVNLIDERSQVAMSTEGAMAAG-LPRNVSFCAHTIL--DNATLVVSDTHRDDR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAEL 349 F +N +V G PGVRFY G PL NG +GTLC D PRE AS LN+LA L Sbjct: 98 FRDNPLVTGTPGVRFYAGVPLSLPNGTLVGTLCLLDYVPRELSASDMAALNDLAAL 153 [31][TOP] >UniRef100_Q87WK3 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas syringae pv. tomato RepID=Q87WK3_PSESM Length = 607 Score = 86.7 bits (213), Expect = 8e-16 Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 1/121 (0%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184 F+ P ALV++ D+ R + R G R + P SFC +T+ S D + IPDA D RF Sbjct: 43 FQTPIALVSIVDEHRQWFRARVGLSAR-ETPRNVSFCAYTILS--DTLFEIPDATLDERF 99 Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRH 361 NN +V G P +R+Y G PLI +G +G+LC D KPRE + +L A LV++ Sbjct: 100 MNNSLVTGHPDIRYYAGAPLITDDGLALGSLCVIDTKPREPMSEHQTQMLKRFASLVMKR 159 Query: 362 L 364 + Sbjct: 160 I 160 [32][TOP] >UniRef100_Q167N3 Sensory box/GGDEF family protein, putative n=1 Tax=Roseobacter denitrificans OCh 114 RepID=Q167N3_ROSDO Length = 785 Score = 86.7 bits (213), Expect = 8e-16 Identities = 53/123 (43%), Positives = 71/123 (57%), Gaps = 1/123 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P LV+L D R + + A+ + + SFC T A R + +MVIPDA KDAR Sbjct: 90 VFSVPIVLVSLIDLNRQWFK-AKVGLELCETNLDVSFC--TYAVRQNDVMVIPDATKDAR 146 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358 F NNE+VRG G+RFY G PL ++G +GTLC D P +F + +L LA LVV Sbjct: 147 FANNELVRGPDGIRFYAGAPLRTADGFVVGTLCLVDGVPHLDFGSEDRALLAKLAVLVVD 206 Query: 359 HLE 367 +E Sbjct: 207 LME 209 [33][TOP] >UniRef100_C6DFX5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Pectobacterium carotovorum subsp. carotovorum PC1 RepID=C6DFX5_PECCP Length = 722 Score = 86.7 bits (213), Expect = 8e-16 Identities = 56/124 (45%), Positives = 71/124 (57%), Gaps = 2/124 (1%) Frame = +2 Query: 2 IFEAPAALVALFD-DRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDA 178 IF P LV+L + +R++F F SFC T+ + +IMV+PDALKDA Sbjct: 41 IFNVPIVLVSLVEAERQLFAASVGVPFCETSRDI--SFCAHTILKK--KIMVVPDALKDA 96 Query: 179 RFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVV 355 RF NN +V G P +RFY G PLI +GH IGTLC D+KPR R L +LA LV+ Sbjct: 97 RFRNNPLVVGVPYIRFYAGIPLITPSGHAIGTLCIIDLKPRSTFTKRDEHNLQDLASLVM 156 Query: 356 RHLE 367 LE Sbjct: 157 DKLE 160 [34][TOP] >UniRef100_A1SVH2 Diguanylate cyclase with GAF sensor n=1 Tax=Psychromonas ingrahamii 37 RepID=A1SVH2_PSYIN Length = 316 Score = 86.7 bits (213), Expect = 8e-16 Identities = 54/155 (34%), Positives = 78/155 (50%), Gaps = 1/155 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P ALV+L D+ R + + G + P SFCG + ++I +IPD +KD R Sbjct: 41 MFDVPIALVSLVDENRQWFKSCTG-INVSEIPRDISFCGHAILE--NEIFIIPDTIKDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PL +G +GTLC D +PR D L +LAEL Sbjct: 98 FSDNPLVLNEPYIRFYAGCPLRYLDGSTLGTLCIIDTQPRVLDEEDLDALKDLAELAEHE 157 Query: 362 LEKDIALQLRAHDN-NSLAAAYGXLRRTLDCFDHC 463 L +A+QL D L+ G ++ D C Sbjct: 158 L---MAVQLATQDELTKLSNRRGFIKLAQHGLDIC 189 [35][TOP] >UniRef100_Q0EE59 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas syringae pv. actinidiae RepID=Q0EE59_PSESF Length = 607 Score = 86.7 bits (213), Expect = 8e-16 Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 1/121 (0%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184 F+ P ALV++ D+ R + R G R + P SFC +T+ S D + IPDA D RF Sbjct: 43 FQTPIALVSIVDEHRQWFRARVGLSAR-ETPRNVSFCAYTILS--DTLFEIPDATLDERF 99 Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRH 361 NN +V G P +R+Y G PLI +G +G+LC D KPRE + +L A LV++ Sbjct: 100 MNNSLVTGHPDIRYYAGAPLITDDGLALGSLCVIDTKPREPMSEHQTQMLKRFASLVMKR 159 Query: 362 L 364 + Sbjct: 160 I 160 [36][TOP] >UniRef100_B1G7L8 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia graminis C4D1M RepID=B1G7L8_9BURK Length = 326 Score = 86.7 bits (213), Expect = 8e-16 Identities = 52/137 (37%), Positives = 72/137 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P ALV+L D R + + G + SFC + +D I+ +PD L D R Sbjct: 41 LFGVPIALVSLVDANRQWFKSCVG-LTASETSRDVSFCAHAIL--DDDILAVPDTLADER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PL NG R+GTLC DVKPRE D +L +LA + + Sbjct: 98 FHDNPLVTEAPNIRFYAGCPLTVPNGSRLGTLCLIDVKPRELDDEERELLRDLARMAEQE 157 Query: 362 LEKDIALQLRAHDNNSL 412 L A+QL D+ +L Sbjct: 158 L---AAVQLATLDDLTL 171 [37][TOP] >UniRef100_Q39GU9 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia sp. 383 RepID=Q39GU9_BURS3 Length = 323 Score = 86.3 bits (212), Expect = 1e-15 Identities = 49/121 (40%), Positives = 64/121 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P ALV+L DD R + + G SFC + N MVI DAL D R Sbjct: 41 LFDVPIALVSLVDDDRQWFKSHAG-LDVTQTSRDVSFCSHALLEGNT--MVIQDALNDNR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G PG+RFY G PL A NG IGTLC D +PR + +L +LA + R Sbjct: 98 FHDNPLVTGAPGIRFYAGRPLTAPNGAPIGTLCLIDTRPRSLEPDELALLGDLAHMTERE 157 Query: 362 L 364 + Sbjct: 158 I 158 [38][TOP] >UniRef100_C4T4E6 Diguanylate cyclase (GGDEF domain) n=1 Tax=Yersinia intermedia ATCC 29909 RepID=C4T4E6_YERIN Length = 330 Score = 86.3 bits (212), Expect = 1e-15 Identities = 48/133 (36%), Positives = 75/133 (56%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P AL+++ D R + + G + P SFCG + D I+++P+AL D R Sbjct: 43 LFDVPIALISIVDVNRQWFKSHPGLVT-SETPRDISFCGHAILG--DDILLVPNALDDIR 99 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V PG+RFY G PL+ NG ++GTLC D+KPR D +L +LA++ + Sbjct: 100 FSDNPLVTDDPGIRFYAGCPLVVPNGSKLGTLCLIDLKPRILDEYDQQLLCDLAKMAEQE 159 Query: 362 LEKDIALQLRAHD 400 + A+QL D Sbjct: 160 I---AAVQLATID 169 [39][TOP] >UniRef100_A4JE43 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia vietnamiensis G4 RepID=A4JE43_BURVG Length = 323 Score = 85.9 bits (211), Expect = 1e-15 Identities = 47/121 (38%), Positives = 66/121 (54%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P A+V+L D+ R + + G SFC + + D MV+ DAL D R Sbjct: 41 LFDVPIAVVSLVDEDRQWFKSHPG-LDATQTSRDVSFCAHALLA--DDTMVVKDALNDDR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G PG+RFY G PL A NG +GTLC D +PRE A +L +LA + R Sbjct: 98 FHDNPLVTGQPGIRFYAGRPLAAPNGAPVGTLCLIDTRPRELCADELALLGDLAHMTERE 157 Query: 362 L 364 + Sbjct: 158 I 158 [40][TOP] >UniRef100_Q3BUK7 Putative phosphodiesterase n=1 Tax=Xanthomonas campestris pv. vesicatoria str. 85-10 RepID=Q3BUK7_XANC5 Length = 666 Score = 85.5 bits (210), Expect = 2e-15 Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 1/121 (0%) Frame = +2 Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187 +A ALV+L D+ R + + G R + P +FC A R+D++MV+PDA D RFC Sbjct: 99 DAEIALVSLVDEHRQWFKARIGLEAR-ETPRSQAFCAH--AIRSDEVMVVPDARLDPRFC 155 Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRHL 364 +N +V G P +RFY G PL +GH IGTLC PR DA+ L L +L V + Sbjct: 156 DNPLVMGPPFIRFYAGAPLKLRDGHSIGTLCVIGTSPRPGLDAAAITQLEGLRDLAVLRV 215 Query: 365 E 367 E Sbjct: 216 E 216 [41][TOP] >UniRef100_A9WA16 Diguanylate cyclase n=2 Tax=Chloroflexus RepID=A9WA16_CHLAA Length = 370 Score = 85.5 bits (210), Expect = 2e-15 Identities = 47/122 (38%), Positives = 70/122 (57%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I + P ALV L D R + G F G+ +FC +T+ + D +MV+PDA +D R Sbjct: 53 ICQTPIALVNLVDRHRQWSMARLG-FSDGEVERTLTFCAFTI-NDPDHVMVVPDATRDPR 110 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N VR P +RFY G PL+ S+G+ +GT+C D++PR+ + +L L+ VV Sbjct: 111 FASNPYVRREPYIRFYAGAPLVTSHGYALGTVCVIDLQPRQLSPEQLEMLRLLSRQVVTQ 170 Query: 362 LE 367 LE Sbjct: 171 LE 172 [42][TOP] >UniRef100_Q2BQ10 Diguanylate cyclase, putative n=1 Tax=Neptuniibacter caesariensis RepID=Q2BQ10_9GAMM Length = 327 Score = 85.5 bits (210), Expect = 2e-15 Identities = 51/133 (38%), Positives = 71/133 (53%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF+ P ALV+L D R + + G + SFCG + +DQ+ VI +AL+D R Sbjct: 47 IFDVPIALVSLVDTNRQWFKSCMG-LDASETGRDISFCGHAIL--DDQVFVINNALQDPR 103 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PL G R+GTLC D KPR+F + L +LA + + Sbjct: 104 FADNPLVTDAPHIRFYAGCPLRDVGGQRLGTLCLIDTKPRDFSHDDVIALKDLAAMAEQE 163 Query: 362 LEKDIALQLRAHD 400 L A+QL D Sbjct: 164 L---AAVQLATTD 173 [43][TOP] >UniRef100_A4BK94 Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain n=1 Tax=Reinekea blandensis MED297 RepID=A4BK94_9GAMM Length = 301 Score = 85.5 bits (210), Expect = 2e-15 Identities = 56/154 (36%), Positives = 82/154 (53%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184 F P ALV+L D+ R + + G R SFCG + S D ++VI + L D+RF Sbjct: 42 FHVPIALVSLVDENRQWFKSCFGLDVRHT-DRNISFCGHAIHS--DALLVIENTLIDSRF 98 Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364 +N +V G P +RFY G PL A G RIGTLC D KPR+ D S L LA++V + L Sbjct: 99 HDNPLVIGNPHIRFYAGAPLHAPEGERIGTLCLIDRKPRQLDHSERKQLRQLADIVEQEL 158 Query: 365 EKDIALQLRAHDNNSLAAAYGXLRRTLDCFDHCV 466 ++++ + D+ + + LD D+C+ Sbjct: 159 ---VSVRSSSMDSET---ELSNRKGLLDLADYCL 186 [44][TOP] >UniRef100_UPI0001A446DD putative signaling protein n=1 Tax=Pectobacterium carotovorum subsp. brasiliensis PBR1692 RepID=UPI0001A446DD Length = 722 Score = 85.1 bits (209), Expect = 2e-15 Identities = 55/124 (44%), Positives = 73/124 (58%), Gaps = 2/124 (1%) Frame = +2 Query: 2 IFEAPAALVALFD-DRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDA 178 IF P LV+L + +R++F F + P SFC T+ + +IMV+ DALKDA Sbjct: 41 IFSVPIVLVSLVETERQLFAASVGVPFC--ETPRDISFCAHTILKK--KIMVVHDALKDA 96 Query: 179 RFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVV 355 RF NN +V G P +RFY G PL+ +GH IGTLC D+KPR R L++LA LV+ Sbjct: 97 RFKNNPLVVGVPYIRFYAGIPLMTPSGHAIGTLCIIDLKPRTTFTKRDEHNLHDLASLVM 156 Query: 356 RHLE 367 LE Sbjct: 157 DKLE 160 [45][TOP] >UniRef100_Q1YRB1 Diguanylate cyclase, putative n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YRB1_9GAMM Length = 319 Score = 85.1 bits (209), Expect = 2e-15 Identities = 52/133 (39%), Positives = 73/133 (54%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P ALV+L D R + + G + P SFCG ++ +++ +IPDA D R Sbjct: 41 LFDVPIALVSLVDKDRQWFKSRIG-LPVSETPRDISFCGHSILG--EEVFIIPDASSDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PL A NG +IGTLC D KPR+F + L +LA + + Sbjct: 98 FQDNPLVIDKPNIRFYAGCPLRALNGTQIGTLCIIDDKPRDFSEADLSALTDLAAMAEQE 157 Query: 362 LEKDIALQLRAHD 400 L ALQL D Sbjct: 158 L---AALQLAVLD 167 [46][TOP] >UniRef100_C9Y4F4 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis RepID=C9Y4F4_9ENTR Length = 329 Score = 85.1 bits (209), Expect = 2e-15 Identities = 44/117 (37%), Positives = 68/117 (58%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F AP AL++L D +++ +G + P SFCG T+ N+ ++I DAL D R Sbjct: 47 LFNAPVALISLVDQEQLWFASCDGVEPK-PIPRNVSFCGHTIL--NNAPLIITDALSDER 103 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352 F +N +V G P +RFY G P+ +G G+LC D +PREF + ++L +LA +V Sbjct: 104 FHDNALVNGPPHIRFYAGCPVQLPDGATAGSLCIIDTEPREFSEADTLLLRDLAAIV 160 [47][TOP] >UniRef100_UPI00018735BF GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas syringae pv. tomato T1 RepID=UPI00018735BF Length = 607 Score = 84.7 bits (208), Expect = 3e-15 Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 1/121 (0%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184 F+ P ALV++ D+ R + R G R + P SFC +T+ S + IPDA D RF Sbjct: 43 FQTPIALVSIVDEHRQWFRARVGLSAR-ETPRNVSFCAYTILSHT--LFEIPDATLDERF 99 Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRH 361 NN +V G P +R+Y G PLI +G +G+LC D KPRE + +L A LV++ Sbjct: 100 MNNSLVTGHPDIRYYAGAPLITDDGLALGSLCVIDTKPREPMSEHQTQMLKRFASLVMKR 159 Query: 362 L 364 + Sbjct: 160 I 160 [48][TOP] >UniRef100_Q48E25 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48E25_PSE14 Length = 620 Score = 84.7 bits (208), Expect = 3e-15 Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 1/121 (0%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184 F+ P AL+++ D+ R + R G + P SFC +T+ S D + IPDA D RF Sbjct: 56 FQTPIALISIVDEHRQWFRARVG-LNAQETPRNVSFCAYTILS--DSLFEIPDATLDDRF 112 Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRH 361 NN +V G P +R+Y G PLI +G +G+LC D KPRE + +L A LV++ Sbjct: 113 MNNSLVTGHPDIRYYAGAPLITDDGIALGSLCVIDTKPREPMSEHQMQMLKRFASLVMKR 172 Query: 362 L 364 + Sbjct: 173 I 173 [49][TOP] >UniRef100_B8HS57 Sensor protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HS57_CYAP4 Length = 1965 Score = 84.7 bits (208), Expect = 3e-15 Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 1/127 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P LV+L D+ R + + G F + + + C +T+ +D + V+PDA +D R Sbjct: 50 LFGVPIVLVSLVDETRAWFKSCYG-FNQQEVARDATICSFTLL--HDDVFVVPDARQDDR 106 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358 F N +V+ PG+RFY G PL+ ++G +GTLC D +PR+ A + L +LA +V+ Sbjct: 107 FACNPLVKAEPGLRFYAGAPLLTADGFNLGTLCLLDTQPRDSLTAEQRATLTDLAAMVMD 166 Query: 359 HLEKDIA 379 LE +A Sbjct: 167 ELELRLA 173 [50][TOP] >UniRef100_A4SI79 GGDEF domain protein n=1 Tax=Aeromonas salmonicida subsp. salmonicida A449 RepID=A4SI79_AERS4 Length = 318 Score = 84.7 bits (208), Expect = 3e-15 Identities = 50/133 (37%), Positives = 74/133 (55%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P +LV+L D+ R + + G + P SFCG + D + V+ DA +D R Sbjct: 41 MFDVPISLVSLVDEDRQWFKSCCG-LPVPETPRDISFCGHAILG--DDLFVVEDATRDLR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +RFY G+PL G+++GTLC D KPR D + +L +LA +V R Sbjct: 98 FADNPLVSGDPHIRFYAGSPLQIGEGYKLGTLCIIDRKPRLLDERQRDLLTDLAGMVERE 157 Query: 362 LEKDIALQLRAHD 400 L A+QL D Sbjct: 158 L---AAIQLATMD 167 [51][TOP] >UniRef100_UPI0001AF4C5A GAF domain/GGDEF domain/EAL domain-containing protein n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6 RepID=UPI0001AF4C5A Length = 607 Score = 84.3 bits (207), Expect = 4e-15 Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 1/121 (0%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184 F+AP +LV++ D+ R + R G K + P SFC +T+ S D +PDA D RF Sbjct: 43 FQAPISLVSIVDENRQWFRARVG-LKPRETPRNVSFCAYTILS--DVPFEVPDATIDERF 99 Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRH 361 NN +V G P +R+Y G PLI +G +G+LC D KPRE + ++L A LV++ Sbjct: 100 VNNGLVTGHPDIRYYAGAPLITDDGLALGSLCVIDTKPREPMSEHQMLMLKRFASLVMKR 159 Query: 362 L 364 + Sbjct: 160 I 160 [52][TOP] >UniRef100_Q8PLK2 Putative uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. citri RepID=Q8PLK2_XANAC Length = 618 Score = 84.3 bits (207), Expect = 4e-15 Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 1/121 (0%) Frame = +2 Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187 +A A+V+L D+ R + + G R + P +FC A R+D++MV+PDA D RFC Sbjct: 51 DAEIAVVSLVDEHRQWFKARIGLEAR-ETPRSQAFCAH--AIRSDEVMVVPDAQLDPRFC 107 Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRHL 364 +N +V G P +RFY G PL +GHRIGTLC PR D + L L +L V + Sbjct: 108 DNPLVLGPPFIRFYAGAPLKLRDGHRIGTLCVIGTSPRPGLDQAAITQLEGLRDLAVLRV 167 Query: 365 E 367 E Sbjct: 168 E 168 [53][TOP] >UniRef100_Q4ZR61 PAS:GGDEF n=1 Tax=Pseudomonas syringae pv. syringae B728a RepID=Q4ZR61_PSEU2 Length = 732 Score = 84.3 bits (207), Expect = 4e-15 Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 1/123 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF+ P L++L R F + G + SFC + + RN + ++PDAL+D R Sbjct: 41 IFDLPIVLISLVHRDRQFFKARVG-LDVCETGRDVSFCNFALMGRN--VFLVPDALQDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358 F +N +V G P +RFY G PLI ++GH +G+LC D KPRE F +VL +LA +++ Sbjct: 98 FSSNALVVGAPHIRFYAGAPLITASGHVLGSLCLIDNKPRETFSERDQLVLQDLAVMIIE 157 Query: 359 HLE 367 +E Sbjct: 158 RME 160 [54][TOP] >UniRef100_Q48GS4 Sensory box/GGDEF family protein n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A RepID=Q48GS4_PSE14 Length = 732 Score = 84.3 bits (207), Expect = 4e-15 Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 1/123 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF+ P L++L R F + G + SFC + + RN + ++PDAL+D R Sbjct: 41 IFDVPIVLISLVHRDRQFFKARIG-LDVCETGRDVSFCNFALMGRN--VFLVPDALQDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358 F +N +V G P +RFY G PLI ++GH +G+LC D KPRE F +VL +LA +V+ Sbjct: 98 FSSNALVVGAPYIRFYAGAPLITASGHVLGSLCLIDNKPRETFSQRDQLVLQDLAVIVIE 157 Query: 359 HLE 367 +E Sbjct: 158 RME 160 [55][TOP] >UniRef100_B8G5J8 Diguanylate cyclase with GAF sensor n=1 Tax=Chloroflexus aggregans DSM 9485 RepID=B8G5J8_CHLAD Length = 367 Score = 84.3 bits (207), Expect = 4e-15 Identities = 47/122 (38%), Positives = 67/122 (54%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I + P ALV L D R + + G F + + +FC +T+ + D + V+PDA D R Sbjct: 51 ICQTPMALVNLIDRDRQWSKARLG-FTDSEVDRKLAFCSYTI-NYPDDVFVVPDATCDER 108 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N V G P +RFY G PL+ NG+ +GT+C DV+P + +L LA VVR Sbjct: 109 FAHNPFVCGDPYIRFYAGAPLVTPNGYALGTVCVVDVRPHRLTPEQIEMLRVLARQVVRQ 168 Query: 362 LE 367 LE Sbjct: 169 LE 170 [56][TOP] >UniRef100_A3JB69 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax=Marinobacter sp. ELB17 RepID=A3JB69_9ALTE Length = 806 Score = 84.3 bits (207), Expect = 4e-15 Identities = 46/122 (37%), Positives = 65/122 (53%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184 + P AL +L D++R + + G + + P +FC A R D + V+ DA KD RF Sbjct: 53 YNTPIALFSLLDEKRQWFKSKRGLDLK-ETPRSIAFCDH--AIRQDSVFVVADASKDERF 109 Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364 CNN MV G +RFY G P+ G ++GTLC D KPR+ VL LA L+ + Sbjct: 110 CNNPMVTGESHIRFYAGMPVREPGGFKMGTLCIMDHKPRDIPEHELDVLRTLASLIEDEV 169 Query: 365 EK 370 E+ Sbjct: 170 ER 171 [57][TOP] >UniRef100_B7FU53 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FU53_PHATR Length = 153 Score = 84.0 bits (206), Expect = 5e-15 Identities = 46/121 (38%), Positives = 72/121 (59%), Gaps = 3/121 (2%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF P ALV+L D R + G + P +++FC + ++++ ++V+PDA KD R Sbjct: 35 IFNVPIALVSLVDLGRQWFMSNRGLGSVRETPRKYAFCAHAILNKHN-LLVVPDASKDFR 93 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE---FDASRCVVLNNLAELV 352 F N +V G P +RFY G+PL++ G+++GTLC D K R DA + L +LA++V Sbjct: 94 FETNPLVTGPPNIRFYAGSPLVSPEGYKLGTLCIIDSKVRPEGLLDAEK-ATLRDLADMV 152 Query: 353 V 355 V Sbjct: 153 V 153 [58][TOP] >UniRef100_Q4UNM5 Putative uncharacterized protein n=1 Tax=Xanthomonas campestris pv. campestris str. 8004 RepID=Q4UNM5_XANC8 Length = 582 Score = 83.6 bits (205), Expect = 6e-15 Identities = 45/133 (33%), Positives = 71/133 (53%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P ALV+L D+ R + + G P +FC + +D +M +P+A D RF N Sbjct: 49 PIALVSLVDEHRQWWKANVGLPGVSQTPRELAFCAHAIL--DDAVMEVPNASDDPRFSGN 106 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373 E+V PG+R+Y G P++ S+G R+GT+C D +PR+ ++ L +LA + LE+ Sbjct: 107 ELVTDAPGIRYYAGAPIVLSDGLRMGTVCVIDQRPRQLQPAQLEALRHLARVAAEGLEQR 166 Query: 374 IALQLRAHDNNSL 412 + RA N L Sbjct: 167 RLMLERAETNAQL 179 [59][TOP] >UniRef100_B0RMK5 Putative signal transduction protein n=2 Tax=Xanthomonas campestris pv. campestris RepID=B0RMK5_XANCB Length = 582 Score = 83.6 bits (205), Expect = 6e-15 Identities = 45/133 (33%), Positives = 71/133 (53%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P ALV+L D+ R + + G P +FC + +D +M +P+A D RF N Sbjct: 49 PIALVSLVDEHRQWWKANVGLPGVSQTPRELAFCAHAIL--DDAVMEVPNASDDPRFSGN 106 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373 E+V PG+R+Y G P++ S+G R+GT+C D +PR+ ++ L +LA + LE+ Sbjct: 107 ELVTDAPGIRYYAGAPIVLSDGLRMGTVCVIDQRPRQLQPAQLEALRHLARVAAEGLEQR 166 Query: 374 IALQLRAHDNNSL 412 + RA N L Sbjct: 167 RLMLERAETNAQL 179 [60][TOP] >UniRef100_A9BX42 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1 Tax=Delftia acidovorans SPH-1 RepID=A9BX42_DELAS Length = 594 Score = 83.6 bits (205), Expect = 6e-15 Identities = 46/122 (37%), Positives = 66/122 (54%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F AP A++ + D+ R + + G G +FC T+ RN+ IMVIPD D+R Sbjct: 41 MFMAPIAIITVLDEHRQWFKAPVGVDMDGSLRTD-AFCDHTI--RNEGIMVIPDTHLDSR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F N +V P +RFY G PLI +GH IG+LC D +PR F + L +A +V Sbjct: 98 FSENPLVTHKPNIRFYAGVPLIMESGHAIGSLCIIDTRPRTFSEEQGQQLQAMAAIVQAQ 157 Query: 362 LE 367 L+ Sbjct: 158 LQ 159 [61][TOP] >UniRef100_A3VSH9 FOG: GGDEF domain protein n=1 Tax=Parvularcula bermudensis HTCC2503 RepID=A3VSH9_9PROT Length = 388 Score = 83.6 bits (205), Expect = 6e-15 Identities = 47/120 (39%), Positives = 68/120 (56%) Frame = +2 Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187 + P ALV+L DD R + + G + P +FC A +ND +V+ +AL+D RF Sbjct: 41 DVPVALVSLVDDHRQWFKARLG-IDDPETPREIAFCAH--AIQNDDPLVVENALEDPRFR 97 Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 +N +V G VRFY G P+I S G+R+GT+C D PR+ + +L +LA L R LE Sbjct: 98 SNPLVTGDTHVRFYAGAPIILSGGYRLGTVCVLDTNPRQISEGQRQILVDLAGLAARELE 157 [62][TOP] >UniRef100_Q98BW5 Mlr5400 protein n=1 Tax=Mesorhizobium loti RepID=Q98BW5_RHILO Length = 416 Score = 83.2 bits (204), Expect = 8e-15 Identities = 49/146 (33%), Positives = 78/146 (53%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P A+V++ D R + + EG + + +FC +T+ ++ +++ DA KD R Sbjct: 50 VFDVPIAIVSVIDGHRQWYKACEG-LAINEVERKATFCQYTILQ--EEPLIVTDATKDPR 106 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N MVR P +RFY G PL + +GH IG++C PREF +L + A+L + Sbjct: 107 FADNPMVRNDPHIRFYAGVPLRSRDGHNIGSVCAIGYIPREFSDRDIAILQDFADLAMDE 166 Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRR 439 LE LR H ++ A G L R Sbjct: 167 LE------LRQHASSD--AVTGVLSR 184 [63][TOP] >UniRef100_Q8DJE3 Sensor protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DJE3_THEEB Length = 1353 Score = 83.2 bits (204), Expect = 8e-15 Identities = 45/122 (36%), Positives = 66/122 (54%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I E P AL++L D +R + + G + P +FC + DQ++++PDA D R Sbjct: 41 ICETPIALISLVDRQRQWFKSKVG-IDACETPRNVAFCAHVILQ--DQLVIVPDARLDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N V G P +RFY G PL+ G+ IGTLC D +PR+ + + L LA V+ Sbjct: 98 FADNPFVTGPPYIRFYAGMPLVTPQGYGIGTLCVVDYQPRQLNPVQQQTLRTLARQVINE 157 Query: 362 LE 367 LE Sbjct: 158 LE 159 [64][TOP] >UniRef100_Q7U978 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 8102 RepID=Q7U978_SYNPX Length = 239 Score = 82.8 bits (203), Expect = 1e-14 Identities = 58/163 (35%), Positives = 81/163 (49%), Gaps = 6/163 (3%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 + P AL++L D R + + G + + P WSFC + S + ++IPDAL D R Sbjct: 41 VCSTPIALLSLIDTDRQWFKSKVGV-EIQETPRDWSFCAHAIHSSDP--LIIPDALMDDR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +R Y G PL S R+GTLC D PR+ + C V+ LA VV Sbjct: 98 FRDNPLVCGDPNIRLYAGFPLENSKALRVGTLCVIDRVPRQLNDKECGVMKALARQVVSF 157 Query: 362 LE---KDIAL--QLRAH-DNNSLAAAYGXLRRTLDCFDHCVAL 472 LE K I L AH +NN + + R+ D H + L Sbjct: 158 LELRKKSINLIESFCAHTENNRMISTCSYCRKAQDKNGHWMHL 200 [65][TOP] >UniRef100_Q07Y18 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella frigidimarina NCIMB 400 RepID=Q07Y18_SHEFN Length = 327 Score = 82.8 bits (203), Expect = 1e-14 Identities = 45/121 (37%), Positives = 63/121 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F ++V+L D R + + +G + SFCG A ++V+PDALKD R Sbjct: 41 LFSVSISVVSLIDSERQWFKSVQG-LDICETQRDISFCGH--AINQQHVLVVPDALKDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PL NG R+GTLC D KPR F L +L ++V Sbjct: 98 FADNPLVLAAPNIRFYAGYPLTMPNGVRVGTLCIIDDKPRSFSKDDEAALEDLGKIVAEE 157 Query: 362 L 364 L Sbjct: 158 L 158 [66][TOP] >UniRef100_C6XJK2 Sensor protein n=1 Tax=Hirschia baltica ATCC 49814 RepID=C6XJK2_HIRBI Length = 814 Score = 82.8 bits (203), Expect = 1e-14 Identities = 44/117 (37%), Positives = 65/117 (55%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P ALV+L D+ R + + G + SFC + S N +MV+ +A++D + Sbjct: 38 MFDVPIALVSLVDENRQWFKSNCGLDGVTETARDISFCQHAIKSTN--VMVVENAIEDEK 95 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352 + N +V G P +RFY G PLI GH +GTLC D KPR+F A +L LA + Sbjct: 96 YDQNPLVLGEPSIRFYAGAPLITEEGHALGTLCLIDRKPRKFSAQEQALLVRLATTI 152 [67][TOP] >UniRef100_B2SZU2 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia phytofirmans PsJN RepID=B2SZU2_BURPP Length = 326 Score = 82.8 bits (203), Expect = 1e-14 Identities = 49/137 (35%), Positives = 72/137 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P ALV+L D R + + G + + SFC + D+I+++PD L D R Sbjct: 41 LFGVPIALVSLVDADRQWFKSCVG-LEASETSRDVSFCAHAILG--DEILMVPDTLADER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PL NG ++GTLC D KPR D +L +LA + + Sbjct: 98 FHDNPLVTDNPSIRFYAGCPLTVPNGSKLGTLCLIDTKPRGLDEEERQLLRDLARMAEQE 157 Query: 362 LEKDIALQLRAHDNNSL 412 L A+QL D+ +L Sbjct: 158 L---AAVQLATLDDLTL 171 [68][TOP] >UniRef100_A1TRS2 Diguanylate phosphodiesterase with GAF sensor n=1 Tax=Acidovorax citrulli AAC00-1 RepID=A1TRS2_ACIAC Length = 595 Score = 82.8 bits (203), Expect = 1e-14 Identities = 48/126 (38%), Positives = 71/126 (56%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P ALV+L D R + + G R + +FC T+ R ++MV+ DAL+D R Sbjct: 39 LFDVPIALVSLVDADRQWFKSQIGLPVR-ETCREDAFCDHTI--RTSEVMVVEDALQDPR 95 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F N +V+G P +RFY G PLI H +G+LC D PR FD ++ L +LA LV+ Sbjct: 96 FAANPLVQGPPHIRFYAGAPLILRGHHHLGSLCLIDSVPRAFDTAQQRQLADLAALVMAQ 155 Query: 362 LEKDIA 379 ++ A Sbjct: 156 IDLQCA 161 [69][TOP] >UniRef100_C9NSQ2 GGDEF domain protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450 RepID=C9NSQ2_9VIBR Length = 319 Score = 82.8 bits (203), Expect = 1e-14 Identities = 48/129 (37%), Positives = 70/129 (54%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P A+V+L D+ R + + G R + SFCG + +D +I DA KD R Sbjct: 41 LFDVPIAVVSLVDNHRQWFKSCIGLPVR-ETARNVSFCGHVI--NDDGPFIINDATKDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +RFY G PL+ N ++GTLC D KPRE + L +LA++ + Sbjct: 98 FLDNPLVMGEPFIRFYAGVPLVYHNQSKLGTLCIIDTKPRELTMQQMADLVDLAKVAEQE 157 Query: 362 LEKDIALQL 388 LE I L Sbjct: 158 LEATIQATL 166 [70][TOP] >UniRef100_B8EE24 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella baltica OS223 RepID=B8EE24_SHEB2 Length = 323 Score = 82.4 bits (202), Expect = 1e-14 Identities = 47/121 (38%), Positives = 63/121 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF P +V L D R + + +G + + P SFCG A D I ++ DALKD R Sbjct: 41 IFSLPICVVTLVDAERQWFKSRQG-LEVTETPREISFCGH--AINQDDIFIVNDALKDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PL +R+GTLC +PREF A L +L E+V Sbjct: 98 FSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPREFTAEDIETLTDLGEMVEAE 157 Query: 362 L 364 L Sbjct: 158 L 158 [71][TOP] >UniRef100_B4RWH1 Sensor protein n=1 Tax=Alteromonas macleodii 'Deep ecotype' RepID=B4RWH1_ALTMD Length = 542 Score = 82.4 bits (202), Expect = 1e-14 Identities = 47/122 (38%), Positives = 67/122 (54%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I + P AL++L D R + + G + +FC + A D + IP+A D R Sbjct: 41 ICDTPIALISLIDPDRQWFKSRVG-LDAEETSREIAFC--SHAILQDDVFEIPNASLDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +RFY G PL++ +GH IGTLC D KPR+ S+ L L++ VV H Sbjct: 98 FHDNPLVTGAPDIRFYAGAPLVSPSGHAIGTLCTIDRKPRKLTESQKTSLQTLSKSVVAH 157 Query: 362 LE 367 LE Sbjct: 158 LE 159 [72][TOP] >UniRef100_A5GSN2 GAF domain protein n=1 Tax=Synechococcus sp. RCC307 RepID=A5GSN2_SYNR3 Length = 238 Score = 82.4 bits (202), Expect = 1e-14 Identities = 46/118 (38%), Positives = 65/118 (55%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P AL++L D + + + G R + P WSFC +A + + M+I DAL D RF +N Sbjct: 48 PIALMSLVSDEKQWFKSTVGLEAR-ETPRDWSFCAHAIA--DSEPMIIEDALNDTRFRHN 104 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 +V G P +R Y G PL HR+GTLC D KP ++ +V+ +LA VV LE Sbjct: 105 PLVSGDPNIRLYAGFPLETPAEHRLGTLCVIDRKPGALSDAQLIVMKSLARQVVTLLE 162 [73][TOP] >UniRef100_A3D858 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella baltica OS155 RepID=A3D858_SHEB5 Length = 323 Score = 82.4 bits (202), Expect = 1e-14 Identities = 47/121 (38%), Positives = 63/121 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF P +V L D R + + +G + + P SFCG A D I ++ DALKD R Sbjct: 41 IFSLPICVVTLVDAERQWFKSRQG-LEVTETPREISFCGH--AINQDDIFIVNDALKDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PL +R+GTLC +PREF A L +L E+V Sbjct: 98 FSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPREFTAEDIETLTDLGEMVEAE 157 Query: 362 L 364 L Sbjct: 158 L 158 [74][TOP] >UniRef100_O52937 Sensor protein n=1 Tax=Calothrix viguieri RepID=O52937_9CYAN Length = 744 Score = 82.4 bits (202), Expect = 1e-14 Identities = 47/138 (34%), Positives = 78/138 (56%), Gaps = 1/138 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P LV+L D+ R + + + G F+ + + C + + S D+++VIPD +D+R Sbjct: 50 LFNVPITLVSLVDESRGWFKSSYG-FEMREVRRDTTICSFALLS--DEVLVIPDTREDSR 106 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358 N V+ PG+RFY G PL+ +G +GTLC D KPR+ + VL++LA +V+ Sbjct: 107 LVCNPFVQNEPGLRFYAGAPLLTQDGFNLGTLCLLDTKPRDGLSDEQKSVLSDLAAMVMD 166 Query: 359 HLEKDIALQLRAHDNNSL 412 LE +A + A + +L Sbjct: 167 ELELRLAARKVAQMDTAL 184 [75][TOP] >UniRef100_B7S3A7 Sensor protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S3A7_9GAMM Length = 552 Score = 82.4 bits (202), Expect = 1e-14 Identities = 50/128 (39%), Positives = 67/128 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 + E P ALV+L D R + + G + D SFCG + D+I V+ DALKD+R Sbjct: 41 VCETPIALVSLVDKHRQWFKSRAG-LEATDTHRDLSFCGHAIL--RDEIFVVEDALKDSR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F NN +V P +RFY G PL G IGTLC D PR+ ++ L L+ V+ Sbjct: 98 FINNPLVLDHPNIRFYAGAPLKTPAGENIGTLCVIDTIPRKLTEAQKNSLVALSRQVIAQ 157 Query: 362 LEKDIALQ 385 +E ALQ Sbjct: 158 IELRFALQ 165 [76][TOP] >UniRef100_UPI0001694826 hypothetical protein Xoryp_10570 n=1 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=UPI0001694826 Length = 618 Score = 82.0 bits (201), Expect = 2e-14 Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 1/117 (0%) Frame = +2 Query: 20 ALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEM 199 ALV+L D+ R + + G +R + P +FC T A R+D++MV+ DA D R+C+N + Sbjct: 55 ALVSLVDEHRQWFKARIGLEER-ETPRSQAFC--THAIRSDEVMVVLDARLDPRWCDNPL 111 Query: 200 VRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRHLE 367 V G P +RFY G PL +GH IGTLC PRE DA+ L L +L V +E Sbjct: 112 VLGPPFIRFYVGAPLKLRDGHSIGTLCAIGTSPREGLDAAAITQLEGLRDLAVLRVE 168 [77][TOP] >UniRef100_Q6F7V1 Sensor protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6F7V1_ACIAD Length = 419 Score = 82.0 bits (201), Expect = 2e-14 Identities = 44/122 (36%), Positives = 68/122 (55%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I +AP ++++L D+ R + + + G RG+ ++S C + + +I V+ D L D R Sbjct: 41 ICDAPVSIISLIDETRSWFKSSHGV-PRGEVDRKYSICSHAILQK--EIFVVEDTLLDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V+G VRFY G PL S+G +GTLC D KPR + L+ LA VV+ Sbjct: 98 FHDNPIVQGELAVRFYAGAPLTTSDGFNLGTLCLVDSKPRTLSEDQYKALSVLAVQVVQQ 157 Query: 362 LE 367 E Sbjct: 158 FE 159 [78][TOP] >UniRef100_A1ZZA1 Two-component hybrid sensor and regulator n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZZA1_9SPHI Length = 460 Score = 82.0 bits (201), Expect = 2e-14 Identities = 45/133 (33%), Positives = 71/133 (53%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I E P +L++L + + + + G R + P +FC A N ++ ++ DA KD R Sbjct: 41 ICETPISLMSLVAEDKQWFKAKVGLEPR-ETPREQAFCAH--AIHNPELFIVEDATKDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +RFY G PL +G +GTLC D +PR+ ++ L LA V+ Sbjct: 98 FHDNPLVTGNPDIRFYAGMPLTTPDGFSLGTLCVIDKRPRDLSEAQKTALKTLASQVIAQ 157 Query: 362 LEKDIALQLRAHD 400 LE + L+ AH+ Sbjct: 158 LELRLKLETIAHE 170 [79][TOP] >UniRef100_Q7NVX0 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum RepID=Q7NVX0_CHRVO Length = 168 Score = 81.6 bits (200), Expect = 2e-14 Identities = 48/121 (39%), Positives = 61/121 (50%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184 F AL++L D R++ + G + P SFC + D I+ IPDA D RF Sbjct: 42 FAVKIALISLVDSDRLWFKSRCG-LDASETPRDISFCAHAILG--DDILEIPDASNDNRF 98 Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364 +N MV G P +RFY G PL S+GH IGTLC D KP+ L LA VV + Sbjct: 99 SDNPMVLGDPNIRFYAGAPLKLSSGHTIGTLCLIDPKPKRLAGEEKRHLKTLAHTVVLEI 158 Query: 365 E 367 E Sbjct: 159 E 159 [80][TOP] >UniRef100_Q2P386 Putative uncharacterized protein XOO2236 n=2 Tax=Xanthomonas oryzae pv. oryzae RepID=Q2P386_XANOM Length = 618 Score = 81.6 bits (200), Expect = 2e-14 Identities = 49/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%) Frame = +2 Query: 20 ALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEM 199 ALV+L D+ R + + G +R + P +FC T A R+D++MV+ DA D R C+N + Sbjct: 55 ALVSLVDEHRQWFKTRIGLEER-ETPRSQAFC--THAIRSDEVMVVLDARLDPRLCDNPL 111 Query: 200 VRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRHLE 367 V G P +RFY G PL +GH IGTLC PRE DA L L +L V +E Sbjct: 112 VLGPPFIRFYVGAPLKLRDGHSIGTLCAIGTSPREGLDAGAITQLEGLRDLAVLRVE 168 [81][TOP] >UniRef100_B2SJM9 Putative signal protein with GAF, GGDEF and EAL domains n=1 Tax=Xanthomonas oryzae pv. oryzae PXO99A RepID=B2SJM9_XANOP Length = 595 Score = 81.6 bits (200), Expect = 2e-14 Identities = 49/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%) Frame = +2 Query: 20 ALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEM 199 ALV+L D+ R + + G +R + P +FC T A R+D++MV+ DA D R C+N + Sbjct: 32 ALVSLVDEHRQWFKTRIGLEER-ETPRSQAFC--THAIRSDEVMVVLDARLDPRLCDNPL 88 Query: 200 VRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRHLE 367 V G P +RFY G PL +GH IGTLC PRE DA L L +L V +E Sbjct: 89 VLGPPFIRFYVGAPLKLRDGHSIGTLCAIGTSPREGLDAGAITQLEGLRDLAVLRVE 145 [82][TOP] >UniRef100_A6G6E5 GAF domain n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G6E5_9DELT Length = 369 Score = 81.6 bits (200), Expect = 2e-14 Identities = 46/121 (38%), Positives = 66/121 (54%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184 F+ P A ++L ++ R + + G G +FC T A D+++++PDA +D RF Sbjct: 45 FDVPMAFISLINEDRHWTKAGIGY--SGSIARDITFC--THAIEADEVLLVPDATQDERF 100 Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364 N +V GVRFY G PL+ GHR+GT+C DV+PR V+L LA VV L Sbjct: 101 AANPLVEPEGGVRFYAGAPLVVPGGHRLGTVCAVDVRPRTPKRELLVLLGALARQVVELL 160 Query: 365 E 367 E Sbjct: 161 E 161 [83][TOP] >UniRef100_UPI00003839DD COG2203: FOG: GAF domain n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI00003839DD Length = 311 Score = 81.3 bits (199), Expect = 3e-14 Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 11/159 (6%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184 F ALV+L D R + + +G + P SFCG + ++I V+ +A++ F Sbjct: 23 FGVAIALVSLVDADRQWFKSCQG-IDASETPRNISFCGHAIL--REEIFVVTNAIEHPDF 79 Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLA-----EL 349 +N +V G P +RFY G PL A +G R+GTLC D +PR+F A VL +LA EL Sbjct: 80 ADNPLVIGPPNIRFYAGAPLHAPDGERVGTLCVIDPRPRDFSAEDSDVLRDLANCVEGEL 139 Query: 350 VVRHLEKDIALQLRAHDNNSLAA------AYGXLRRTLD 448 + H+ +++ Q+ N+ + A +G L+ TL+ Sbjct: 140 ALAHI-RNLPEQINLSVNDMIWAFGLSMPTWGSLKNTLN 177 [84][TOP] >UniRef100_Q1J3M1 Diguanylate cyclase with GAF sensor n=1 Tax=Deinococcus geothermalis DSM 11300 RepID=Q1J3M1_DEIGD Length = 531 Score = 81.3 bits (199), Expect = 3e-14 Identities = 52/149 (34%), Positives = 72/149 (48%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 + P A++ D R + + A G + P SFC W++ D ++I + D R Sbjct: 63 LLRTPVAVINFIDRDRQWGKSAVG-LEDTTAPRHDSFCAWSILQ--DTPLIIENTATDPR 119 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F NN MV G P V Y G PLI GHRIGTLC D +P A+ L +LA LVV Sbjct: 120 FRNNPMVTGAPHVHMYAGAPLITPAGHRIGTLCVTDSQPHPLSAADIQALQDLAALVVSE 179 Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRRTLD 448 LE + + ++ A LRR+L+ Sbjct: 180 LELRARNRHLGLELDAQARLNADLRRSLE 208 [85][TOP] >UniRef100_C1D402 Putative GAF/PAS/PAC domains-containing metal dependent phosphohydrolase n=1 Tax=Deinococcus deserti VCD115 RepID=C1D402_DEIDV Length = 608 Score = 81.3 bits (199), Expect = 3e-14 Identities = 46/123 (37%), Positives = 64/123 (52%), Gaps = 1/123 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 + AP AL+ L DDR + + G R + SFC T+ ++V+PD +D R Sbjct: 28 LLNAPIALINLLDDRTQWTKGCYGMDLR-EMDRSLSFCQHTLGMNG--VLVVPDTTQDPR 84 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358 F + +V G +RFY G PLI +GHR+G+LC D PR C L +LA+ VV Sbjct: 85 FSSLPLVTGDSAIRFYAGAPLITPDGHRVGSLCVLDTAPRIGLTEDECAFLQDLADSVVS 144 Query: 359 HLE 367 LE Sbjct: 145 ELE 147 [86][TOP] >UniRef100_A6WJQ9 Diguanylate cyclase n=1 Tax=Shewanella baltica OS185 RepID=A6WJQ9_SHEB8 Length = 323 Score = 81.3 bits (199), Expect = 3e-14 Identities = 46/121 (38%), Positives = 63/121 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF P +V L D R + + +G + + P SFCG A D I ++ DALKD R Sbjct: 41 IFSLPICVVTLVDAERQWFKSRQG-LEVTETPREISFCGH--AINQDDIFIVNDALKDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PL +R+GTLC +PR+F A L +L E+V Sbjct: 98 FSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPRDFTAEDIETLTDLGEMVEAE 157 Query: 362 L 364 L Sbjct: 158 L 158 [87][TOP] >UniRef100_A3D450 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella baltica OS155 RepID=A3D450_SHEB5 Length = 321 Score = 81.3 bits (199), Expect = 3e-14 Identities = 55/155 (35%), Positives = 77/155 (49%), Gaps = 1/155 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P ALV+L D+ R + + G + SFCG + N +VI DA D R Sbjct: 41 LFGVPIALVSLVDENRQWFKSCFG-LDVSETERSISFCGHAIL--NKSALVINDATLDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +RFY G PL +G +GTLC D PR+F +L NLA +V R Sbjct: 98 FFDNPLVIGEPYIRFYAGQPLRTLSGQGLGTLCIIDQTPRDFSDEDITMLANLAGMVERE 157 Query: 362 LEKDIALQLRAHDN-NSLAAAYGXLRRTLDCFDHC 463 + +A+QL D ++ G L T C + C Sbjct: 158 I---MAVQLTISDELTKISNRRGFLTLTRYCLEVC 189 [88][TOP] >UniRef100_C9PIE2 GGDEF domain protein n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PIE2_VIBFU Length = 324 Score = 81.3 bits (199), Expect = 3e-14 Identities = 42/121 (34%), Positives = 68/121 (56%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P ALV L D++R + + + G + P SFCG + D+ +I +A+ D R Sbjct: 41 LFDVPIALVTLVDEKRQWFKSSFG-LNVSETPRDISFCGHAILG--DEPFIINNAVADER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PL+ +G ++GTLC D +PR + + L +LA++ R Sbjct: 98 FADNPLVTDNPHIRFYAGVPLVFQDGSKLGTLCIIDTEPRNLNHDEIIDLLDLAKMAERE 157 Query: 362 L 364 L Sbjct: 158 L 158 [89][TOP] >UniRef100_UPI0000383240 COG2202: FOG: PAS/PAC domain n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383240 Length = 397 Score = 80.9 bits (198), Expect = 4e-14 Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 2/126 (1%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F AA V+L D R +++ G P SFC T+ D ++VIPDA +D R Sbjct: 39 LFGVAAAYVSLVDAERQWLKACAGTMP-AQMPREGSFCSRTI--EQDAVLVIPDARRDPR 95 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVR- 358 F + +V G P V FY G PLI G R+G LC D +PR F + L +LAE+V Sbjct: 96 FRDLGIVTGPPHVAFYAGAPLILRPGLRLGALCLVDPQPRTFTPADAEALRDLAEIVTAQ 155 Query: 359 -HLEKD 373 HL +D Sbjct: 156 LHLRRD 161 [90][TOP] >UniRef100_Q5X574 Putative uncharacterized protein n=1 Tax=Legionella pneumophila str. Paris RepID=Q5X574_LEGPA Length = 441 Score = 80.9 bits (198), Expect = 4e-14 Identities = 49/132 (37%), Positives = 68/132 (51%), Gaps = 5/132 (3%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGA----FKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 P A ++ D + + + + G R D SFC +T+ + + M+IPDAL D R Sbjct: 77 PIAFISFIDSKHQWFKSSCGIGLNKISRND-----SFCHYTI--QQSKPMIIPDALLDER 129 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 FCNN V P +RFY G PL +G +GTLC D KPR D + +L +LA L Sbjct: 130 FCNNPYVTNSPNIRFYAGFPLSTVDGFNVGTLCAIDKKPRNLDETEIQILKDLATLAEDQ 189 Query: 362 LE-KDIALQLRA 394 + DI+L RA Sbjct: 190 VNLLDISLLERA 201 [91][TOP] >UniRef100_Q21KX5 Sensor protein n=1 Tax=Saccharophagus degradans 2-40 RepID=Q21KX5_SACD2 Length = 401 Score = 80.9 bits (198), Expect = 4e-14 Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 15/161 (9%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 + + P ALV+L D+RR + + +G + +FC A + V+ + L+D R Sbjct: 41 VCDTPIALVSLVDERRQWFKSKQG-LTACETHRDLAFCAH--AIHDTAPFVVNNTLEDDR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +RFY G PLI +G+ +GTLC D +PR D ++ +L+ LA VV Sbjct: 98 FADNPLVTGPPDIRFYAGVPLICPDGYALGTLCVIDTRPRSLDDTQLTILSALARQVVAQ 157 Query: 362 LE-------KDIALQLRA-------HD-NNSLAAAYGXLRR 439 LE ++A +RA HD NS A G +R Sbjct: 158 LELRKQSTRLELANSIRARLITILTHDLRNSFQVAAGYAKR 198 [92][TOP] >UniRef100_B0UA81 Putative phytochrome sensor protein n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UA81_METS4 Length = 603 Score = 80.9 bits (198), Expect = 4e-14 Identities = 48/123 (39%), Positives = 69/123 (56%), Gaps = 4/123 (3%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQ----IMVIPDALKDAR 181 P A ++L D R + + A+ F + P S C +A+ + +V+PD L D+R Sbjct: 478 PFAALSLVDRDRQWFK-AKAGFPFRETPRDASLCAHAVAASDGSGARLPLVVPDTLLDSR 536 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N V G P +RFY G PLI + GH IGTLC AD +PR DA +L LA+L +R Sbjct: 537 FADNPAVVGPPYLRFYAGQPLILAQGHCIGTLCVADTRPRFLDADGETLLRWLADLALRE 596 Query: 362 LEK 370 +E+ Sbjct: 597 IER 599 [93][TOP] >UniRef100_A9L2M2 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella baltica OS195 RepID=A9L2M2_SHEB9 Length = 323 Score = 80.9 bits (198), Expect = 4e-14 Identities = 46/121 (38%), Positives = 63/121 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF P +V L D R + + +G + + P SFCG A I+++ DALKD R Sbjct: 41 IFSLPTCVVTLVDAERQWFKSRQG-LEVTETPREISFCGH--AINQGDILIVNDALKDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PL +R+GTLC +PREF A L +L E+V Sbjct: 98 FSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPREFTAEDIETLTDLGEMVEAE 157 Query: 362 L 364 L Sbjct: 158 L 158 [94][TOP] >UniRef100_A1U6X2 Sensor protein n=1 Tax=Marinobacter aquaeolei VT8 RepID=A1U6X2_MARAV Length = 681 Score = 80.9 bits (198), Expect = 4e-14 Identities = 48/121 (39%), Positives = 65/121 (53%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184 F+ P ALV+L D R + + G R + SFCG + + V+ DAL D RF Sbjct: 42 FDVPIALVSLVDRERQWFKSCYGLGVR-ETGRDISFCGHAILK--SEAFVVSDALADERF 98 Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364 +N +V G P +RFY G PL +G RIGTLC D KPR F L +LA+++ R L Sbjct: 99 SDNPLVTGEPHIRFYAGAPLEDRSGFRIGTLCIIDKKPRGFSNRDEKTLRDLADIIEREL 158 Query: 365 E 367 + Sbjct: 159 Q 159 [95][TOP] >UniRef100_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodiesterase (EAL), with GAF and two PAS/PAC sensor domains n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CCD7_METED Length = 1028 Score = 80.9 bits (198), Expect = 4e-14 Identities = 46/122 (37%), Positives = 65/122 (53%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P A V+L D R + + G G P +FC + + S D ++V+ +A D R Sbjct: 43 LFSVPIAFVSLVDSDRQWFKAKCGIAAEGT-PRDVAFCAYAILS--DDVLVVENAAVDPR 99 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F N +V G VRFY G PLI +G R+GT+C D KP F + L +LA +VV H Sbjct: 100 FAINPLVVGDLAVRFYAGAPLILRSGIRVGTICIFDTKPCSFSEMQRTQLQDLARIVVAH 159 Query: 362 LE 367 +E Sbjct: 160 IE 161 [96][TOP] >UniRef100_C0N6E8 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N6E8_9GAMM Length = 320 Score = 80.9 bits (198), Expect = 4e-14 Identities = 47/137 (34%), Positives = 73/137 (53%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F +LV+L D+ R + + A+G + P SFCG A D + +IPDAL+D R Sbjct: 41 MFGVSISLVSLVDENRQWFKSAQG-IDASETPREISFCGH--AINQDGLFIIPDALEDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PL G +GTLC D +P+E D +L +L ++ + Sbjct: 98 FYDNPLVTDAPNIRFYAGYPLKLRQGINLGTLCLIDGEPKELDEEDQQLLEDLGAMIEQE 157 Query: 362 LEKDIALQLRAHDNNSL 412 + ++QL D +L Sbjct: 158 IN---SIQLATLDELTL 171 [97][TOP] >UniRef100_A4U3H0 Sensor protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4U3H0_9PROT Length = 1382 Score = 80.9 bits (198), Expect = 4e-14 Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 5/127 (3%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184 F ALV+L D R + + +G + P SFCG + +++ V+ +A++ F Sbjct: 42 FGVAIALVSLVDADRQWFKSCQG-IDASETPRNISFCGHAIL--REEVFVVTNAIEHPDF 98 Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLA-----EL 349 +N +V G P +RFY G PL A +G R+GTLC D KPR+F A VL +LA EL Sbjct: 99 ADNPLVIGPPNIRFYAGAPLHAPDGERVGTLCVIDPKPRDFSAEDSDVLRDLANCVEGEL 158 Query: 350 VVRHLEK 370 + H+ K Sbjct: 159 SLTHIRK 165 [98][TOP] >UniRef100_UPI0001693802 putative sensor protein n=1 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=UPI0001693802 Length = 365 Score = 80.5 bits (197), Expect = 5e-14 Identities = 49/133 (36%), Positives = 67/133 (50%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P AL++L D R + + G + + P SFC + DQ+M + D D R Sbjct: 68 LFRTPMALISLVDTHRQWFKSRIG-MQATETPRTLSFCAHAILEP-DQVMEVDDTHLDRR 125 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F N +V G P +RFY G PL+ S+G +GTLC D PR A+ L LA+ VV Sbjct: 126 FVINALVTGEPQIRFYAGAPLLTSDGIALGTLCVLDRTPRRLSAAERDALQALAKQVVNT 185 Query: 362 LEKDIALQLRAHD 400 +E A QL D Sbjct: 186 IELQQAAQLVQQD 198 [99][TOP] >UniRef100_Q5WSQ0 Putative uncharacterized protein n=1 Tax=Legionella pneumophila str. Lens RepID=Q5WSQ0_LEGPL Length = 314 Score = 80.5 bits (197), Expect = 5e-14 Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 1/155 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P A+++ + R +++ EG F + + SFCG + S D+IMVI DA KD R Sbjct: 41 LFGIPIAVISFLEAERQWMKSTEG-FDIKEAKRKTSFCGHVILS--DEIMVIEDATKDKR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N V G P RFY G PL N + +G +C D KPR + S V+N+LA++V Sbjct: 98 FHDNPFVLGKPYFRFYAGCPL-KINKYNVGVICLIDDKPRSINDSDKNVINDLAQMVEME 156 Query: 362 LEKDIALQLRAHDN-NSLAAAYGXLRRTLDCFDHC 463 LE +L L D L+ G L+ F C Sbjct: 157 LE---SLHLSLTDELTGLSNRRGFLKLASYLFQKC 188 [100][TOP] >UniRef100_A5IBY1 Adenylate cyclase PLUS two component hybrid sensor and regulator n=1 Tax=Legionella pneumophila str. Corby RepID=A5IBY1_LEGPC Length = 441 Score = 80.5 bits (197), Expect = 5e-14 Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 4/116 (3%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGA----FKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 P A ++ D + + + + G R D SFC +T+ + ++ M+IPDAL D R Sbjct: 77 PIAFISFIDSKHQWFKSSCGIGLNKISRND-----SFCHYTI--QQNKPMIIPDALLDER 129 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAEL 349 FCNN V P +RFY G PL +G +GTLC D KPR D + +L +LA L Sbjct: 130 FCNNPYVTNSPNIRFYAGFPLSTFDGFNVGTLCAIDKKPRNLDETEIQILKDLATL 185 [101][TOP] >UniRef100_C9YAH7 Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YAH7_9BURK Length = 359 Score = 80.5 bits (197), Expect = 5e-14 Identities = 44/121 (36%), Positives = 68/121 (56%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I + P AL++L D+ R + + G + P +FC + D++M +PDAL+DAR Sbjct: 40 ICDTPIALISLVDEDRQWFKARLG-LSAMETPRGQAFCAHAIVDP-DRVMEVPDALQDAR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G PG+RFY G PL+ +G +GT+C D PR+ + L L+ VV+ Sbjct: 98 FVDNPLVTGDPGIRFYAGAPLLTPSGAALGTVCVIDKVPRKLTERQSEALQALSRQVVQL 157 Query: 362 L 364 L Sbjct: 158 L 158 [102][TOP] >UniRef100_C5TBD5 Diguanylate cyclase with GAF sensor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TBD5_ACIDE Length = 369 Score = 80.5 bits (197), Expect = 5e-14 Identities = 50/126 (39%), Positives = 69/126 (54%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I EAP ALV+ D R + + AE R + P S C + + SR + V+PD +DAR Sbjct: 65 ICEAPIALVSFVDRERQWFK-AERGMGRRETPIDQSVCRFAIQSRG--VFVVPDLRQDAR 121 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V GVRFY G PL +G +GT+C D +PR + +LN LA V+R Sbjct: 122 FASNPLVTQPHGVRFYAGAPLRTPDGFALGTVCVLDYQPRTLGQPQQDMLNVLAHQVMRL 181 Query: 362 LEKDIA 379 LE +A Sbjct: 182 LELKLA 187 [103][TOP] >UniRef100_A9HC88 Sensory box/GGDEF family protein, putative n=1 Tax=Roseobacter litoralis Och 149 RepID=A9HC88_9RHOB Length = 744 Score = 80.5 bits (197), Expect = 5e-14 Identities = 50/123 (40%), Positives = 68/123 (55%), Gaps = 1/123 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P LV+L D R + + A+ + SFC T A R + +MVIPDA KD R Sbjct: 49 VFSVPIVLVSLIDLNRQWFK-AKVGLDLCETNLDVSFC--TYAVRQNDVMVIPDATKDIR 105 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358 F NNE+V+ G+RFY G PL ++G +GTLC D P +F + +L LA LVV Sbjct: 106 FANNELVKAPDGIRFYAGAPLRTTDGFVVGTLCLVDGVPHLDFGSEDRALLAKLAVLVVD 165 Query: 359 HLE 367 +E Sbjct: 166 LME 168 [104][TOP] >UniRef100_A3YBC5 Diguanylate cyclase, putative n=1 Tax=Marinomonas sp. MED121 RepID=A3YBC5_9GAMM Length = 324 Score = 80.5 bits (197), Expect = 5e-14 Identities = 47/121 (38%), Positives = 64/121 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P ALV+L D R + + +G + SFCG + D IP+AL+D R Sbjct: 41 LFHVPIALVSLIDKDRQWFKSCDG-LPVTETGRDISFCGHAILG--DNTFYIPNALEDQR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F N +V G P +RFY G PL A+NG +IGTLC D +P+E + L LA V + Sbjct: 98 FFYNPLVTGDPNIRFYAGHPLKAANGEKIGTLCIIDSEPKELNEEELNCLAELANTVEQE 157 Query: 362 L 364 L Sbjct: 158 L 158 [105][TOP] >UniRef100_A1ZNR6 Serine/threonine protein kinases n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZNR6_9SPHI Length = 508 Score = 80.5 bits (197), Expect = 5e-14 Identities = 47/137 (34%), Positives = 72/137 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I EAP +L++L + + + + A+ + + P +FC + + N + VI DA KD R Sbjct: 41 ICEAPISLISLVAENKQWFK-AKVGLEMQETPRSQAFCAHAIHTPN--LFVIEDATKDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PL G R+GTLC D KPR+ ++ L LA V+ Sbjct: 98 FWDNPLVTNSPDIRFYAGMPLTTPEGFRLGTLCVIDQKPRQLSLAQKQALQTLATQVITQ 157 Query: 362 LEKDIALQLRAHDNNSL 412 LE + L+ A + L Sbjct: 158 LELRLKLKTVAAERQEL 174 [106][TOP] >UniRef100_UPI0001AEC0D5 histidine kinase response regulator hybrid protein n=1 Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0D5 Length = 542 Score = 80.1 bits (196), Expect = 7e-14 Identities = 47/122 (38%), Positives = 65/122 (53%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I E P AL++L D R + + G + +FC + A + IP+A D R Sbjct: 41 ICETPIALISLIDPNRQWFKSRVG-LDAEETSRDIAFC--SHAILQSDVFEIPNATLDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +RFY G PLI +GH IGTLC D KPR+ ++ L L++ VV H Sbjct: 98 FHDNPLVTGAPDIRFYAGAPLITPSGHAIGTLCAIDSKPRKLTETQKSSLQTLSKSVVAH 157 Query: 362 LE 367 LE Sbjct: 158 LE 159 [107][TOP] >UniRef100_Q4KGS9 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas fluorescens Pf-5 RepID=Q4KGS9_PSEF5 Length = 591 Score = 80.1 bits (196), Expect = 7e-14 Identities = 45/122 (36%), Positives = 67/122 (54%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184 F+ P AL+ L D R + + G F P SFC +T+ S + + + +A +D RF Sbjct: 40 FKVPTALITLVDRDRQWFKSRVG-FAPEQTPIEQSFCAYTIKSGD--VFEVENARQDVRF 96 Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364 N +V PG+ FY G PLI S GH IG+LC D +P+ +A+ L +LA LV+ + Sbjct: 97 HANPLVTQDPGIGFYAGAPLITSTGHAIGSLCVIDRQPQRLNAAERQQLRDLASLVMEQV 156 Query: 365 EK 370 E+ Sbjct: 157 EQ 158 [108][TOP] >UniRef100_Q1H3K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylobacillus flagellatus KT RepID=Q1H3K2_METFK Length = 727 Score = 80.1 bits (196), Expect = 7e-14 Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 2/124 (1%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRW--SFCGWTMASRNDQIMVIPDALKD 175 +F+ P A + + +F + GA GD R SFC + N +MV+PD+ D Sbjct: 41 MFDMPVAAINMIGSDHVFFAASIGA---GDVDMRRDVSFCAHAINQTN--VMVVPDSHLD 95 Query: 176 ARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVV 355 RF +N +V G + FY G PLI+ +GH +G LC D +PREF C L LA++ V Sbjct: 96 ERFHDNPLVMGPANLSFYAGIPLISPDGHALGALCVIDSQPREFSEEDCERLRELAKMAV 155 Query: 356 RHLE 367 LE Sbjct: 156 DRLE 159 [109][TOP] >UniRef100_C5B219 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B219_METEA Length = 279 Score = 80.1 bits (196), Expect = 7e-14 Identities = 45/117 (38%), Positives = 66/117 (56%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P AL++L D+ R + + G G P +FC +T+ +D + V+PDA A Sbjct: 50 LFDVPIALISLLDEDRQWFKAKCGLHVSGT-PREQAFCNYTIL--HDSVFVVPDARAHAD 106 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352 F N +V G P +RFY G PLI + G RIG+LC D K R F+ +L LA++V Sbjct: 107 FALNPLVTGEPFIRFYAGAPLIVAPGTRIGSLCLIDRKLRAFNEEDSQLLARLAQVV 163 [110][TOP] >UniRef100_C1F5G2 GAF domain/GGDEF domain protein n=1 Tax=Acidobacterium capsulatum ATCC 51196 RepID=C1F5G2_ACIC5 Length = 369 Score = 80.1 bits (196), Expect = 7e-14 Identities = 42/122 (34%), Positives = 65/122 (53%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 + +AP A + L D+ R + + G + + P SFC +A +++ V+PDA KDAR Sbjct: 40 VCDAPMATITLVDEDRQWFKSRIGITAQ-ETPRSVSFCAHAIAQ--NELFVVPDATKDAR 96 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F + +V P +RFY G P+++ G +GT+C D KPRE + V L LA V Sbjct: 97 FSGSPLVLDDPNIRFYAGMPIVSPEGFHVGTMCVLDKKPRELTEEKQVALRVLARQVAAQ 156 Query: 362 LE 367 + Sbjct: 157 FQ 158 [111][TOP] >UniRef100_A9VXM6 GAF domain protein n=2 Tax=Methylobacterium extorquens group RepID=A9VXM6_METEP Length = 276 Score = 80.1 bits (196), Expect = 7e-14 Identities = 45/117 (38%), Positives = 66/117 (56%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P AL++L D+ R + + G G P +FC +T+ +D + V+PDA A Sbjct: 47 LFDVPIALISLLDEDRQWFKAKCGLHVSGT-PREQAFCNYTIL--HDSVFVVPDARAHAD 103 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352 F N +V G P +RFY G PLI + G RIG+LC D K R F+ +L LA++V Sbjct: 104 FALNPLVTGEPFIRFYAGAPLIVAPGTRIGSLCLIDRKLRAFNEEDSQLLARLAQVV 160 [112][TOP] >UniRef100_B4V775 Magnesium or manganese-dependent protein phosphatase (Fragment) n=1 Tax=Streptomyces sp. Mg1 RepID=B4V775_9ACTO Length = 330 Score = 80.1 bits (196), Expect = 7e-14 Identities = 53/166 (31%), Positives = 76/166 (45%), Gaps = 18/166 (10%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P A V + D+ RI+ + A G + CG + S D+ +VIPD L D Sbjct: 55 LFKVPVASVTIVDEDRIWFKAAHGLEGVNEISREPGLCGSAILS--DETLVIPDTLTDPV 112 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV--- 352 NN +V G GVRFY P+I +GHR+GT+ D +PR L +LA +V Sbjct: 113 AFNNGLVAGPMGVRFYAAAPIITGDGHRLGTVNILDTRPRLITEDDTATLADLAAIVRDE 172 Query: 353 ---------------VRHLEKDIALQLRAHDNNSLAAAYGXLRRTL 445 R E++ A Q D N++ A L+RTL Sbjct: 173 LEMRLAALNALRAEQERRREQEEARQRAEQDKNAIEAFASTLQRTL 218 [113][TOP] >UniRef100_C7CHC2 Putative uncharacterized protein n=1 Tax=Methylobacterium extorquens DM4 RepID=C7CHC2_METED Length = 267 Score = 79.7 bits (195), Expect = 9e-14 Identities = 45/117 (38%), Positives = 66/117 (56%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P AL++L D+ R + + G G P +FC +T+ +D + V+PDA A Sbjct: 38 LFDVPIALISLLDEDRQWFKAKCGLHVSGT-PREQAFCNYTIL--HDSVFVVPDARAHAD 94 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352 F N +V G P +RFY G PLI + G RIG+LC D K R F+ +L LA++V Sbjct: 95 FALNPLVTGEPFIRFYAGAPLIVAPGTRIGSLCLIDRKLRAFNEEDSRLLARLAQVV 151 [114][TOP] >UniRef100_B4VUP4 Sensor protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VUP4_9CYAN Length = 1038 Score = 79.7 bits (195), Expect = 9e-14 Identities = 42/122 (34%), Positives = 64/122 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I +AP AL++L D R + + G P +FC + + DQ++++P+AL D R Sbjct: 93 ICDAPIALISLLDATRQWFKSKVG-IDATQTPKEQAFCAHAILNP-DQVLMVPNALDDER 150 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F N +V P +RFY GTPL+ +G +GTLC D PR+ + L L V+ Sbjct: 151 FAQNPLVTSEPNIRFYAGTPLVTPDGFALGTLCVIDQVPRQLTPEQIEALEALGRQVIAQ 210 Query: 362 LE 367 +E Sbjct: 211 IE 212 [115][TOP] >UniRef100_Q8PEJ1 Putative uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. citri RepID=Q8PEJ1_XANAC Length = 575 Score = 79.3 bits (194), Expect = 1e-13 Identities = 41/119 (34%), Positives = 68/119 (57%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P ALV+L D+RR + + G + P +FC +T+ + D +M + DA D RF +N Sbjct: 42 PIALVSLVDERRQWWKANIGLPGVSETPRELAFCTYTI--QGDAVMEVRDAPADPRFHDN 99 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEK 370 +V PG+R+Y G P++ +G R+GT+C D +PR + ++ L LA++ LE+ Sbjct: 100 ALVTDAPGIRYYAGAPIVLPDGLRMGTVCVIDQRPRALEPAQLQALQQLAKVAAEGLEQ 158 [116][TOP] >UniRef100_Q8D4I0 FOG: GGDEF domain n=1 Tax=Vibrio vulnificus RepID=Q8D4I0_VIBVU Length = 322 Score = 79.3 bits (194), Expect = 1e-13 Identities = 43/121 (35%), Positives = 67/121 (55%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P ALV+L D+ R + + G + P SFCG + + +++ DA +DAR Sbjct: 41 LFDVPIALVSLVDEDRQWFKSCFG-LNASETPRDISFCGHAILGADT--LIVEDASQDAR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +RFY G PL+ + +GTLC D KPR + + L +LA++ R Sbjct: 98 FADNPLVTGEPHIRFYAGVPLMFEHSSCLGTLCIIDTKPRTLNEDERLDLIDLAKMAERE 157 Query: 362 L 364 L Sbjct: 158 L 158 [117][TOP] >UniRef100_Q7MG14 GGDEF family protein n=1 Tax=Vibrio vulnificus YJ016 RepID=Q7MG14_VIBVY Length = 322 Score = 79.3 bits (194), Expect = 1e-13 Identities = 43/121 (35%), Positives = 67/121 (55%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P ALV+L D+ R + + G + P SFCG + + +++ DA +DAR Sbjct: 41 LFDVPIALVSLVDEDRQWFKSCFG-LNASETPRDISFCGHAILGADT--LIVEDASQDAR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +RFY G PL+ + +GTLC D KPR + + L +LA++ R Sbjct: 98 FADNPLVTGEPHIRFYAGVPLMFEHSSCLGTLCIIDTKPRTLNEDERLDLIDLAKMAERE 157 Query: 362 L 364 L Sbjct: 158 L 158 [118][TOP] >UniRef100_Q055K2 Sensor protein n=1 Tax=Leptospira borgpetersenii serovar Hardjo-bovis L550 RepID=Q055K2_LEPBL Length = 564 Score = 79.3 bits (194), Expect = 1e-13 Identities = 43/122 (35%), Positives = 66/122 (54%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I ++P L++L D R++ + G G P SFC +T+ D+I I +AL D + Sbjct: 46 ICDSPIVLISLIDTNRLWFKSKIGMNVSG-IPRDISFCQYTIIQ--DEIFEIENALNDEK 102 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F NN V G P +RFY GTPL G +GTLC D +P+ D+ + + L L+ ++ + Sbjct: 103 FQNNPFVLGPPYIRFYAGTPLKTPEGFNVGTLCVFDTEPKRLDSRQKMTLKVLSNQIIAN 162 Query: 362 LE 367 E Sbjct: 163 FE 164 [119][TOP] >UniRef100_A3PPJ2 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides ATCC 17029 RepID=A3PPJ2_RHOS1 Length = 325 Score = 79.3 bits (194), Expect = 1e-13 Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 1/128 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 + E P A V L D R + + G + P SFC T+ +R+ MV+PDA D R Sbjct: 41 VLEVPYAAVTLIDADRQWFKSLVG-LSGSEGPRHESFCTHTIKTRDP--MVVPDATLDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F ++ +V G G+R Y G PL +G+ +G LC D PR F S+ ++ + A LV+ Sbjct: 98 FRDSPLVTGAAGIRSYLGVPLETPDGYNLGALCAVDTAPRTFSTSQIEIMKSFASLVLDE 157 Query: 362 LE-KDIAL 382 LE + IAL Sbjct: 158 LELRQIAL 165 [120][TOP] >UniRef100_B5HZB9 Magnesium or manganese-dependent protein phosphatase n=1 Tax=Streptomyces sviceus ATCC 29083 RepID=B5HZB9_9ACTO Length = 462 Score = 79.3 bits (194), Expect = 1e-13 Identities = 45/122 (36%), Positives = 62/122 (50%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +FE P A V + D+ RI+ + A G + C A D VIPD L D Sbjct: 25 LFEVPVATVTIVDEDRIWFKAAHGLEGVSEIGRDPGLCA--SAVLTDDTTVIPDTLLDPV 82 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 C+N +V G GVRFY P+I ++GHR+GT+ D +PRE + L +LA +V Sbjct: 83 ACSNPLVAGPMGVRFYAAAPIITADGHRLGTVNILDTRPREISEADASTLTDLAAVVRDQ 142 Query: 362 LE 367 LE Sbjct: 143 LE 144 [121][TOP] >UniRef100_A3XLZ5 Sensor protein n=1 Tax=Leeuwenhoekiella blandensis MED217 RepID=A3XLZ5_9FLAO Length = 415 Score = 79.3 bits (194), Expect = 1e-13 Identities = 52/139 (37%), Positives = 70/139 (50%), Gaps = 6/139 (4%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P AL+ + D R F++ G + P SFC + + +D I +IPDA +D RF NN Sbjct: 41 PIALITMLDYNRNFLKSHYGV-PFNESPREISFCTHAIQT-HDPIFIIPDAREDERFKNN 98 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE-- 367 +V G FY G PL+ GH +GTLC D +PRE D ++ L LA VV E Sbjct: 99 PLVTGDTKAIFYAGVPLVDKGGHALGTLCVFDHEPRELDENQISTLIALAHQVVNLFELR 158 Query: 368 ----KDIALQLRAHDNNSL 412 ++ ALQ NSL Sbjct: 159 RQNIENKALQENLLKKNSL 177 [122][TOP] >UniRef100_A3UFL0 GAF sensor diguanylate cyclase n=1 Tax=Oceanicaulis alexandrii HTCC2633 RepID=A3UFL0_9RHOB Length = 341 Score = 79.3 bits (194), Expect = 1e-13 Identities = 45/122 (36%), Positives = 66/122 (54%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I E P V+L D R + + G + +FC + A ++ MV+PDA +D R Sbjct: 45 ILEVPICAVSLVDADRQWFKAKRG-LAVCETERDIAFCSY--AIEQEEPMVVPDATEDPR 101 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F N +V G P +R Y G PL++ +G+++GTLC DV+PR+F +L A LVV Sbjct: 102 FSANPLVTGDPHLRAYVGVPLVSPDGYQVGTLCAMDVRPRDFSDHELKILRKFARLVVDE 161 Query: 362 LE 367 LE Sbjct: 162 LE 163 [123][TOP] >UniRef100_Q3IWG8 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides 2.4.1 RepID=Q3IWG8_RHOS4 Length = 326 Score = 79.0 bits (193), Expect = 2e-13 Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 1/128 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 + E P A V L D R + + G + P SFC T+ +R+ M++PDA D R Sbjct: 42 VLEVPYAAVTLIDADRQWFKSLVG-LSGSEGPRHESFCTHTIKTRDP--MIVPDATLDPR 98 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F ++ +V G G+R Y G PL +G+ +G LC D PR F S+ ++ + A LV+ Sbjct: 99 FRDSPLVTGAAGIRSYLGVPLETPDGYNLGALCAVDTAPRTFSTSQIEIMKSFASLVLDE 158 Query: 362 LE-KDIAL 382 LE + IAL Sbjct: 159 LELRQIAL 166 [124][TOP] >UniRef100_B9KU13 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides KD131 RepID=B9KU13_RHOSK Length = 326 Score = 79.0 bits (193), Expect = 2e-13 Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 1/128 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 + E P A V L D R + + G + P SFC T+ +R+ M++PDA D R Sbjct: 42 VLEVPYAAVTLIDADRQWFKSLVG-LSGSEGPRHESFCTHTIKTRDP--MIVPDATLDPR 98 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F ++ +V G G+R Y G PL +G+ +G LC D PR F S+ ++ + A LV+ Sbjct: 99 FRDSPLVTGAAGIRSYLGVPLETPDGYNLGALCAVDTAPRTFSTSQIEIMKSFASLVLDE 158 Query: 362 LE-KDIAL 382 LE + IAL Sbjct: 159 LELRQIAL 166 [125][TOP] >UniRef100_B2JC03 Sensor protein n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2JC03_NOSP7 Length = 1297 Score = 79.0 bits (193), Expect = 2e-13 Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 1/141 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P L++L D+ R + + G F + P + C + + + D+ ++IPDA D R Sbjct: 49 LFNMPTVLISLVDESRAWFKSCVG-FDAREVPRDDTLCNFAVLT--DEPLIIPDARLDDR 105 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358 F N V+ PGVRFY G PL++ +G +GTLC D +P + + L +LA +VV Sbjct: 106 FACNPFVQSEPGVRFYAGAPLLSQDGFNLGTLCLLDSQPHDPLSVEQQATLVDLAAIVVD 165 Query: 359 HLEKDIALQLRAHDNNSLAAA 421 LE L+L +H + AA Sbjct: 166 ELE----LRLASHKIAQVDAA 182 [126][TOP] >UniRef100_B0SII8 Sensor protein n=2 Tax=Leptospira biflexa serovar Patoc RepID=B0SII8_LEPBA Length = 553 Score = 79.0 bits (193), Expect = 2e-13 Identities = 46/122 (37%), Positives = 67/122 (54%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I AP +LV+L D+ R + + G K + P +FC + A D++ +IP+A D R Sbjct: 41 ICHAPISLVSLIDETRQWFKSHHG-LKARETPRSLAFC--SHAILGDELFIIPNAKSDNR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F NN +V G P V FY G PL + ++GTLC D KPRE + + +L L + VR Sbjct: 98 FKNNPLVNGDPNVIFYAGIPLALDDQIKLGTLCVIDNKPRELNEEQMQMLRLLGKQTVRL 157 Query: 362 LE 367 L+ Sbjct: 158 LQ 159 [127][TOP] >UniRef100_A8ILU5 Putative signaling protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8ILU5_AZOC5 Length = 804 Score = 79.0 bits (193), Expect = 2e-13 Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 1/123 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P LV+L R F + + G F + SFC A D+I+VIPDA +D R Sbjct: 107 VFDVPIVLVSLLGRDRQFFKASVG-FPVCETSREVSFCAH--AIMQDEILVIPDATRDPR 163 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358 F N +V G P +RFY G PLIA G ++GT+C D +PR F + LN+LA + V Sbjct: 164 FRANPLVLGPPFIRFYAGRPLIAPTGEKVGTVCLIDHEPRFRFTETDRHNLNDLAAMAVD 223 Query: 359 HLE 367 +E Sbjct: 224 RME 226 [128][TOP] >UniRef100_A3SZS5 Sensor protein n=1 Tax=Sulfitobacter sp. NAS-14.1 RepID=A3SZS5_9RHOB Length = 422 Score = 79.0 bits (193), Expect = 2e-13 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 2/125 (1%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 + + P A +++ ++ + + G P FC T+ S D M++PD KDAR Sbjct: 41 LLDCPIAHISVVEEDSQWYKSVVG-MHLDPMPKDTGFCAHTIMS--DAPMIVPDLSKDAR 97 Query: 182 FCNNEMV-RGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVV 355 F + MV +GGP R+Y G PLI S+GHR G+LC D+KP E+ + + + +L +L +VV Sbjct: 98 FERHPMVAKGGPEARYYAGVPLILSSGHRFGSLCALDLKPHEYPSEKQIALLTDLGRIVV 157 Query: 356 RHLEK 370 LE+ Sbjct: 158 AALER 162 [129][TOP] >UniRef100_A3SE26 Sensor protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SE26_9RHOB Length = 422 Score = 79.0 bits (193), Expect = 2e-13 Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 2/125 (1%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 + + P A +++ ++ + + G P FC T+ S D M++PD KDAR Sbjct: 41 LLDCPIAHISVVEEDSQWYKSVVG-MHLDPMPKDTGFCAHTIMS--DAPMIVPDLSKDAR 97 Query: 182 FCNNEMV-RGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVV 355 F + MV +GGP R+Y G PLI S+GHR G+LC D+KP E+ + + + +L +L +VV Sbjct: 98 FERHPMVAKGGPEARYYAGVPLILSSGHRFGSLCALDLKPHEYPSEKQIALLTDLGRIVV 157 Query: 356 RHLEK 370 LE+ Sbjct: 158 AALER 162 [130][TOP] >UniRef100_Q5WWB5 Putative uncharacterized protein n=1 Tax=Legionella pneumophila str. Lens RepID=Q5WWB5_LEGPL Length = 431 Score = 78.6 bits (192), Expect = 2e-13 Identities = 49/132 (37%), Positives = 68/132 (51%), Gaps = 5/132 (3%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGA----FKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 P A ++ D + + + + G R D SFC +T+ + ++ M+I DAL D R Sbjct: 67 PIAFISFIDSKHQWFKSSCGIGLNKISRND-----SFCHYTI--QQNKPMIISDALLDER 119 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 FCNN V P +RFY G PL +G IGTLC D KPR D + +L +LA L Sbjct: 120 FCNNPYVTNSPNIRFYAGFPLSTVDGFNIGTLCAIDKKPRNLDETEIQILKDLATLAEDQ 179 Query: 362 LE-KDIALQLRA 394 + DI+L RA Sbjct: 180 VNLLDISLLERA 191 [131][TOP] >UniRef100_C1D2J4 Putative Diguanylate cyclase (GGDEF domain) with GAF sensor n=1 Tax=Deinococcus deserti VCD115 RepID=C1D2J4_DEIDV Length = 508 Score = 78.6 bits (192), Expect = 2e-13 Identities = 45/120 (37%), Positives = 64/120 (53%) Frame = +2 Query: 44 RRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEMVRGGPGVR 223 R+ + D E R D SFC WT+ S D ++ + DA +D RF + ++V G P +R Sbjct: 59 RKSWFGDGETNCSRED-----SFCAWTILS--DDVLAVSDAREDPRFHDYKLVVGDPNIR 111 Query: 224 FYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKDIALQLRAHDN 403 Y G PL+ +GHRIG+LC + RE D L +LA LV+ LE LR H++ Sbjct: 112 MYAGAPLVTPSGHRIGSLCVFSAEARELDLDDQATLRDLAALVMDELE------LRLHNH 165 [132][TOP] >UniRef100_A6SWK6 Diguanylate cyclase n=1 Tax=Janthinobacterium sp. Marseille RepID=A6SWK6_JANMA Length = 320 Score = 78.6 bits (192), Expect = 2e-13 Identities = 44/121 (36%), Positives = 61/121 (50%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P A V L ++ G ++ SFC + A +D+IM+IPD L D R Sbjct: 41 VFNVPIAKVTLVGPEMVYTVSCAGE-QQAPIQRDLSFC--SHAIHSDEIMIIPDTLDDGR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N V P +RFY G PL+ NG R+GTLC D PR+ ++L +LA V Sbjct: 98 FADNPFVVEDPRIRFYAGCPLVVMNGCRLGTLCLVDKVPRKMTQEDIILLKDLAATVEHE 157 Query: 362 L 364 L Sbjct: 158 L 158 [133][TOP] >UniRef100_A1WZ01 Sensor protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WZ01_HALHL Length = 680 Score = 78.6 bits (192), Expect = 2e-13 Identities = 45/122 (36%), Positives = 64/122 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I++ P A V D R + + A+G + + P SFCG +A N +V+ D +D R Sbjct: 41 IYQVPIATVTFVDRDRQWFKSAQG-LEDCETPRSTSFCGHVVADGNP--LVVEDTHQDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PLI G IG LC D +PR F + L +LA L++ Sbjct: 98 FHDNPLVTSPPHIRFYAGVPLITPAGQPIGVLCIQDRQPRRFSDEDLIPLQDLAVLLISE 157 Query: 362 LE 367 LE Sbjct: 158 LE 159 [134][TOP] >UniRef100_Q3AWZ6 GAF n=1 Tax=Synechococcus sp. CC9902 RepID=Q3AWZ6_SYNS9 Length = 245 Score = 78.2 bits (191), Expect = 3e-13 Identities = 44/120 (36%), Positives = 63/120 (52%) Frame = +2 Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187 + P AL++L D R + + G + WSFC + S + ++I DAL+D RF Sbjct: 43 DTPIALLSLVDTNRQWFKSKVGVDVE-ETVRDWSFCAHAIHS--PEPLIIEDALQDERFV 99 Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 +N +V+G P +R Y G PL HRIGTLC D KP +C ++ +LA V LE Sbjct: 100 DNPLVKGDPQIRLYAGFPLQNDQNHRIGTLCVIDRKPHGLTDVQCEIMESLARQAVSFLE 159 [135][TOP] >UniRef100_Q13PE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Burkholderia xenovorans LB400 RepID=Q13PE1_BURXL Length = 728 Score = 78.2 bits (191), Expect = 3e-13 Identities = 51/123 (41%), Positives = 66/123 (53%), Gaps = 1/123 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF P AL++L + R + G + SFC A R D IM+IPDA DAR Sbjct: 41 IFSVPIALISLVETERQLFAASVG-LDVCETSRDVSFCAH--AIRGDDIMIIPDARVDAR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358 F +N +V G P +RFY G PL ++GH +GTLC +PRE F L +LA LV+ Sbjct: 98 FHDNPLVTGAPFIRFYAGAPLRTASGHALGTLCIIGHRPRENFGEQDRRNLRDLAALVLD 157 Query: 359 HLE 367 LE Sbjct: 158 KLE 160 [136][TOP] >UniRef100_Q09CZ9 Sensor protein n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q09CZ9_STIAU Length = 729 Score = 78.2 bits (191), Expect = 3e-13 Identities = 45/118 (38%), Positives = 63/118 (53%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P A ++L D+ R + + + G + + P SFC T A + ++ V+PDA DARF +N Sbjct: 85 PTAFISLTDETRQWFKASTGVNEALEVPRDDSFC--TYAIQQKELFVVPDAALDARFRDN 142 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 V GGP +RFY PL+ G +GT+C D PRE + L LA VV LE Sbjct: 143 PYVAGGPRIRFYAAAPLVTQEGFVLGTVCAIDRMPRELTPQQGRSLEALAGQVVSLLE 200 [137][TOP] >UniRef100_C0N9M8 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010 RepID=C0N9M8_9GAMM Length = 318 Score = 78.2 bits (191), Expect = 3e-13 Identities = 48/133 (36%), Positives = 70/133 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF+ P +LV+L D+ R + + G + + SFCG + D+ VI D D+R Sbjct: 41 IFDVPISLVSLVDENRQWFKSCYGISAK-ETGRDVSFCGHAILG--DEAFVIEDTHLDSR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +RFY G P+ + +GTLC D +PR F ++L LAELV R Sbjct: 98 FVDNPLVVGEPHIRFYAGYPIRHVDNFILGTLCLIDTRPRHFSHREQLILQGLAELVERE 157 Query: 362 LEKDIALQLRAHD 400 + A+QL D Sbjct: 158 IH---AIQLATMD 167 [138][TOP] >UniRef100_B4WNN7 GAF domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WNN7_9SYNE Length = 242 Score = 78.2 bits (191), Expect = 3e-13 Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 1/130 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I + P AL++L D R + + G R + P SFC + +++ I ++ DA DAR Sbjct: 40 ICDVPIALISLVDKDRQWFKSKVGISVR-ETPRDVSFCAHAILTKD--ITIVKDARDDAR 96 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PLI ++GH +GTLC D +P+E + L LA +V Sbjct: 97 FSDNPLVTCAPNIRFYAGVPLITASGHPLGTLCVIDHQPKELSEVQRRTLIALARQIVVQ 156 Query: 362 LE-KDIALQL 388 LE ++LQL Sbjct: 157 LELHRVSLQL 166 [139][TOP] >UniRef100_A3JAN2 Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAN2_9ALTE Length = 319 Score = 78.2 bits (191), Expect = 3e-13 Identities = 46/137 (33%), Positives = 74/137 (54%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F +LV+L D+ R + + ++G + + P SFCG A + + +IPDA++D R Sbjct: 41 MFGVSVSLVSLVDEDRQWFKSSQG-LEATETPRDISFCGH--AINQNGLFIIPDAIEDVR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PL G +IGTLC D KPR D + +L +V + Sbjct: 98 FADNPLVTDAPNIRFYAGYPLEIREGLKIGTLCLIDQKPRVMDEEDQQLFKDLGAMVEQE 157 Query: 362 LEKDIALQLRAHDNNSL 412 ++ ++QL D +L Sbjct: 158 IK---SIQLATLDELTL 171 [140][TOP] >UniRef100_B8CFN0 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8CFN0_THAPS Length = 165 Score = 78.2 bits (191), Expect = 3e-13 Identities = 40/101 (39%), Positives = 55/101 (54%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IFE P LV+L D R + G + + SFC + S ND + ++PD D R Sbjct: 34 IFEVPICLVSLVDIGRQWFMSNRGLGDVRETSRQVSFCAHAILSSND-VFIVPDTHLDPR 92 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE 304 F +N +V G P +RFY G PL++ G ++GT C D KPRE Sbjct: 93 FISNGLVTGPPFIRFYAGVPLVSPEGFKLGTFCIIDTKPRE 133 [141][TOP] >UniRef100_Q2NYT0 Histidine kinase-response regulator hybrid protein n=2 Tax=Xanthomonas oryzae pv. oryzae RepID=Q2NYT0_XANOM Length = 874 Score = 77.8 bits (190), Expect = 3e-13 Identities = 48/119 (40%), Positives = 61/119 (51%) Frame = +2 Query: 11 APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190 AP ALV+L D R + + G+ G P SFC + A ++M +PDA D RF N Sbjct: 48 APVALVSLLDADRQWFKARCGSDLEGT-PRSASFC--SHAIMGTELMEVPDAEADPRFVN 104 Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 N +V G PGVR Y G PLI G+ GTLC +PR D + L LA + LE Sbjct: 105 NPLVVGAPGVRSYVGVPLIGREGYAYGTLCTLSTRPRVLDEQQKQALIRLARQAAKQLE 163 [142][TOP] >UniRef100_C6WVC8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylotenera mobilis JLW8 RepID=C6WVC8_METML Length = 737 Score = 77.8 bits (190), Expect = 3e-13 Identities = 46/128 (35%), Positives = 65/128 (50%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I + P A++ L D+ R + + G + P SFCG + + I IP+AL D R Sbjct: 41 ICKTPIAIITLLDESRQWFKSKVG-LTATETPREISFCGHAILGND--IFEIPNALDDDR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +RFY G PL++S + +GTLC D K RE + L L LV Sbjct: 98 FIDNPLVTGNPNIRFYAGIPLVSSVNYALGTLCVIDQKARELSEEQRHSLKKLGRLVEAL 157 Query: 362 LEKDIALQ 385 +E I Q Sbjct: 158 IEARIQYQ 165 [143][TOP] >UniRef100_B2SMT3 Putative signal protein with GAF,PAS(PAC) and GGDEF domains n=1 Tax=Xanthomonas oryzae pv. oryzae PXO99A RepID=B2SMT3_XANOP Length = 874 Score = 77.8 bits (190), Expect = 3e-13 Identities = 48/119 (40%), Positives = 61/119 (51%) Frame = +2 Query: 11 APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190 AP ALV+L D R + + G+ G P SFC + A ++M +PDA D RF N Sbjct: 48 APVALVSLLDADRQWFKARCGSDLEGT-PRSASFC--SHAIMGTELMEVPDAEADPRFVN 104 Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 N +V G PGVR Y G PLI G+ GTLC +PR D + L LA + LE Sbjct: 105 NPLVVGAPGVRSYVGVPLIGREGYAYGTLCTLSTRPRVLDEQQKQALIRLARQAAKQLE 163 [144][TOP] >UniRef100_B2J3P7 Diguanylate cyclase with GAF sensor n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2J3P7_NOSP7 Length = 406 Score = 77.8 bits (190), Expect = 3e-13 Identities = 43/122 (35%), Positives = 63/122 (51%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I + P AL++L D R + + G K + P +FC + + I+VIP+A+KD R Sbjct: 107 ICKTPIALISLVDADRQWFKSNIG-LKVRETPRESAFCSHAIL-HPENILVIPNAMKDDR 164 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F NN +V+ +RFY G PL+ NG IGTLC D PR+ + L L + Sbjct: 165 FANNPLVKSNSKIRFYAGAPLVTPNGFPIGTLCVMDTVPRQLSYQQLDALRRLTRQAIAQ 224 Query: 362 LE 367 +E Sbjct: 225 ME 226 [145][TOP] >UniRef100_A8ICL8 Putative signal transduction protein n=1 Tax=Azorhizobium caulinodans ORS 571 RepID=A8ICL8_AZOC5 Length = 611 Score = 77.8 bits (190), Expect = 3e-13 Identities = 46/123 (37%), Positives = 66/123 (53%), Gaps = 1/123 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P A V + +F + G F D SFC T+ ++MV+PDA +D R Sbjct: 41 VFKVPMAAVNMIGSDHVFFAASAG-FGAVDKRREVSFCAHTILQ--GKVMVVPDAEQDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358 F +N +V G G+RFY G PL++ +GH IG LC D PR F + L+ LA +V+ Sbjct: 98 FHDNPLVTGAAGIRFYAGAPLLSGDGHAIGALCILDTFPRVGFASEERERLSQLAHVVMD 157 Query: 359 HLE 367 LE Sbjct: 158 RLE 160 [146][TOP] >UniRef100_A0L3B2 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella sp. ANA-3 RepID=A0L3B2_SHESA Length = 325 Score = 77.8 bits (190), Expect = 3e-13 Identities = 54/147 (36%), Positives = 76/147 (51%), Gaps = 1/147 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I +AP A+V DD ++ + A+ R + SFC + M + D +MV+PDA D R Sbjct: 35 ICDAPVAMVTRTDDTKLNLI-AKVGISRTSVLIKESFCVYAMETP-DAVMVVPDATLDHR 92 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F N MV GPG RFY G+PLI G IGT+C D P++ + + L L+ V+ Sbjct: 93 FSTNAMVISGPGYRFYAGSPLIDPEGAVIGTICVYDHVPKQLNQRQISSLQALSRQVIAI 152 Query: 362 LE-KDIALQLRAHDNNSLAAAYGXLRR 439 LE K + QL H+ + A G R Sbjct: 153 LELKKVGEQL--HNTSMTDALTGVNNR 177 [147][TOP] >UniRef100_C8QG55 Diguanylate cyclase with GAF sensor n=1 Tax=Pantoea sp. At-9b RepID=C8QG55_9ENTR Length = 322 Score = 77.8 bits (190), Expect = 3e-13 Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 1/134 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDF-PWRWSFCGWTMASRNDQIMVIPDALKDA 178 +F P ALV+L ++ + + G + G+ P SFCG + D +MV+ +AL D Sbjct: 41 LFGVPIALVSLLEEDHQWFKSIAG--QSGETAPRNTSFCGHAILQ--DDVMVVENALDDD 96 Query: 179 RFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVR 358 RF +N +V G VRFY G PL G ++GTLC D + R FDA C L +LA + Sbjct: 97 RFYDNPLVTGENPVRFYAGCPLRTPAGAKVGTLCIVDHQARSFDADDCHTLRDLAAMAEA 156 Query: 359 HLEKDIALQLRAHD 400 L IA Q D Sbjct: 157 EL---IAFQTATSD 167 [148][TOP] >UniRef100_B9R099 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R099_9RHOB Length = 877 Score = 77.8 bits (190), Expect = 3e-13 Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 7/151 (4%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF+ P AL++L D+R + + A G G S C +++ D + V+PD L D R Sbjct: 44 IFDCPIALISLVDERDQWFKAACGVDIEGTSR-EVSICQHALSA--DDLFVVPDTLSDER 100 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV--- 352 FC+N +V G P +RFY G PL +R+GTLC D +PR+ + L + +V Sbjct: 101 FCDNPLVMGEPNIRFYAGCPLSLDGKNRLGTLCVIDQRPRKPARQQLHQLRRMGRVVEGL 160 Query: 353 ----VRHLEKDIALQLRAHDNNSLAAAYGXL 433 ++EK+ AL RA + A G L Sbjct: 161 LKSHQANVEKEAAL-ARAEAEHEEAVGKGRL 190 [149][TOP] >UniRef100_A6EQZ6 Sensor protein n=1 Tax=unidentified eubacterium SCB49 RepID=A6EQZ6_9BACT Length = 398 Score = 77.8 bits (190), Expect = 3e-13 Identities = 49/122 (40%), Positives = 67/122 (54%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I E P +L+ L D R F + G + + P SFCG + D I +I DA DAR Sbjct: 41 ICELPISLITLLDSDRNFFKSHHGIDIQ-ESPRDISFCGHAINQEED-IFIINDARLDAR 98 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V+ + FY G PLI +G ++GTLC D KPRE S+ VL N+A+ VV+ Sbjct: 99 FKDNPLVKESQAI-FYAGAPLINPDGLKLGTLCVFDTKPRELTESQIKVLINMAKQVVKL 157 Query: 362 LE 367 E Sbjct: 158 FE 159 [150][TOP] >UniRef100_A3KHX9 Putative magnesium or manganese-dependent protein phosphatase n=1 Tax=Streptomyces ambofaciens ATCC 23877 RepID=A3KHX9_STRAM Length = 493 Score = 77.8 bits (190), Expect = 3e-13 Identities = 44/122 (36%), Positives = 60/122 (49%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P A V + D RI+ + A G + CG A D MVIPD LKD Sbjct: 55 LFDVPVATVTIVDTDRIWFKAAHGLEGVAEIGRDPGLCG--SAILRDDTMVIPDTLKDPV 112 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 +N +V G GVRFY P+I GHR+GT+ D +PR L +LA +V+ Sbjct: 113 AADNPLVAGDMGVRFYAAAPIITPEGHRLGTVNVLDTRPRSITEEDTATLADLAAIVLDE 172 Query: 362 LE 367 +E Sbjct: 173 ME 174 [151][TOP] >UniRef100_A0JRC3 Serine/threonine protein kinase n=1 Tax=Arthrobacter sp. FB24 RepID=A0JRC3_ARTS2 Length = 471 Score = 77.4 bits (189), Expect = 5e-13 Identities = 47/140 (33%), Positives = 74/140 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P A+V++ D RI+ + G + G+ C A D++ V+PDA+ D R Sbjct: 340 MFSVPVAIVSVVDHDRIWFKAHHGT-EVGEIGRDPGLCA--SAILQDEVWVVPDAVTDPR 396 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 N +V G G++FY G PL +G+ +GT+C D +PREF A L +LA +V+ Sbjct: 397 TLANPLVAGEFGLQFYAGVPLRTPDGYNLGTICILDRQPREFTAEDSRALEDLAAIVMND 456 Query: 362 LEKDIALQLRAHDNNSLAAA 421 LE LR +++A+A Sbjct: 457 LE------LRLQSRSAVASA 470 [152][TOP] >UniRef100_Q060H4 GAF n=1 Tax=Synechococcus sp. BL107 RepID=Q060H4_9SYNE Length = 253 Score = 77.4 bits (189), Expect = 5e-13 Identities = 44/120 (36%), Positives = 63/120 (52%) Frame = +2 Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187 + P AL++L D R + + G + WSFC + S + ++I DAL+D RF Sbjct: 43 DTPIALLSLVDTNRQWFKSKVGVDVE-ETVRDWSFCAHAIHS--PEPLIIEDALQDERFV 99 Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 +N +V+G P +R Y G PL HRIGTLC D KP +C ++ +LA V LE Sbjct: 100 DNPLVQGEPQIRLYAGFPLQNDQNHRIGTLCVIDRKPHGLTDVQCKIMESLARQAVSFLE 159 [153][TOP] >UniRef100_A3ETZ5 Diguanylate cyclase with GAF sensor n=1 Tax=Leptospirillum rubarum RepID=A3ETZ5_9BACT Length = 322 Score = 77.4 bits (189), Expect = 5e-13 Identities = 44/116 (37%), Positives = 60/116 (51%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P ALV L D R + + G G+ P SFCG + + +IPDA +D R Sbjct: 41 LFNVPIALVTLVDKDRQWFKSNMG-LSVGETPRSVSFCGHAILQ--EDFFIIPDAREDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAEL 349 F +N +V G P +RFY G L + +IGTLC D KPR + +VL +L L Sbjct: 98 FSDNPLVLGDPRIRFYAGCVLRTRDNQKIGTLCLIDHKPRTMETQDLLVLEDLTAL 153 [154][TOP] >UniRef100_B8IM22 Putative phytochrome sensor protein n=1 Tax=Methylobacterium nodulans ORS 2060 RepID=B8IM22_METNO Length = 607 Score = 77.0 bits (188), Expect = 6e-13 Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 4/124 (3%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRND----QIMVIPDALK 172 F P A ++L D R + + + G R + P S C +A+ + +V+PD L Sbjct: 475 FAVPFAALSLVDSDRQWFKASHGLTFR-EVPRDASLCAHAVAASDGGGCRDPLVVPDTLL 533 Query: 173 DARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352 DARF ++ V G P +RFY G PLI ++GH IGTLC AD +PR D L LAEL Sbjct: 534 DARFADSPAVVGPPHLRFYAGQPLILADGHCIGTLCIADTRPRVLDPEEERRLRWLAELA 593 Query: 353 VRHL 364 + + Sbjct: 594 LNEI 597 [155][TOP] >UniRef100_B7KWZ8 Sensor protein n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KWZ8_METC4 Length = 1125 Score = 77.0 bits (188), Expect = 6e-13 Identities = 44/121 (36%), Positives = 65/121 (53%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F A ++L D R +++ G SFC T+A D ++V+PDA +D R Sbjct: 39 LFGVAIAYISLVDAERQWLKACVGIMPT-QTSRAGSFCDRTIAQ--DAMLVVPDARRDPR 95 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F + E+V G P + FY G PLI G R+G+LC AD +PR+F L +LAE+V Sbjct: 96 FSSLEIVTGPPHIVFYAGAPLILRPGVRLGSLCLADSQPRDFTPEDAAALRDLAEIVTAQ 155 Query: 362 L 364 + Sbjct: 156 M 156 [156][TOP] >UniRef100_A9VWI8 Diguanylate cyclase n=1 Tax=Methylobacterium extorquens PA1 RepID=A9VWI8_METEP Length = 1428 Score = 77.0 bits (188), Expect = 6e-13 Identities = 38/86 (44%), Positives = 54/86 (62%) Frame = +2 Query: 107 SFCGWTMASRNDQIMVIPDALKDARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFA 286 SFC +T+ S DQ++++ DAL+D RF N +V G P +RFY G PL+ G +G+LC Sbjct: 73 SFCTYTILS--DQVLLVEDALQDERFSANPLVTGEPHIRFYAGAPLVLGAGIHLGSLCLI 130 Query: 287 DVKPREFDASRCVVLNNLAELVVRHL 364 D PR F A + L +LA++VV L Sbjct: 131 DRVPRSFSAEQQEQLRDLAQIVVAQL 156 [157][TOP] >UniRef100_Q26DS7 Sensor protein n=1 Tax=Flavobacteria bacterium BBFL7 RepID=Q26DS7_9BACT Length = 402 Score = 77.0 bits (188), Expect = 6e-13 Identities = 45/123 (36%), Positives = 69/123 (56%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I EAP +L+ L D R F++ +G + P SFCG + S ++IM++ DA +D R Sbjct: 41 ICEAPISLITLVDKDRNFLKSRQGV-DLSESPRDISFCGHAIVSE-EEIMIVTDAREDER 98 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G + FY G PL+ NG+++GTLC D KPR + L +A+ V+ Sbjct: 99 FKDNPLVEGLDAI-FYAGVPLVDVNGYKLGTLCVYDHKPRVLTNHQISALKAMAKQVMSL 157 Query: 362 LEK 370 E+ Sbjct: 158 FEE 160 [158][TOP] >UniRef100_B8BRK9 Putative uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BRK9_THAPS Length = 164 Score = 77.0 bits (188), Expect = 6e-13 Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 6/127 (4%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P ALV+L D+ R + + + G + P +FC + ND + V+PDAL+D R Sbjct: 38 MFNVPIALVSLVDEDRQWFKSSCGLSGVAETPRDHAFCAHAIL--NDDLFVVPDALQDER 95 Query: 182 FCNNEMVRGGPGVRFYCG----TPLIASNGHRI--GTLCFADVKPREFDASRCVVLNNLA 343 F +N +V G P VRFY G TP++ +G ++ G+LC D KPR+ L + Sbjct: 96 FADNPLVVGAPNVRFYAGYPLKTPMLNGDGSQVTLGSLCVIDSKPRDLRLEERNALRDFG 155 Query: 344 ELVVRHL 364 +V R + Sbjct: 156 AMVEREI 162 [159][TOP] >UniRef100_Q7NJL6 Sensor protein n=1 Tax=Gloeobacter violaceus RepID=Q7NJL6_GLOVI Length = 448 Score = 76.6 bits (187), Expect = 8e-13 Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 1/140 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P +++L D+ R++ + G + S C W + + ++MVI DA D R Sbjct: 69 LFAVPVCVISLVDECRVWFKSKVG-WSGEQVQRDESLCSWAILQK--ELMVIHDARFDGR 125 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358 N V+ PG+RFY G PL + +G +GTLC D +P FD + L +LA +VV Sbjct: 126 LACNPWVQAEPGIRFYAGAPLTSPDGFNLGTLCLIDTQPHATFDEPQRRTLADLAAIVVD 185 Query: 359 HLEKDIALQLRAHDNNSLAA 418 LE + L L + + + LAA Sbjct: 186 ELE--LRLSLESAEQSRLAA 203 [160][TOP] >UniRef100_Q4UZ06 Histidine kinase/response regulator hybrid protein n=2 Tax=Xanthomonas campestris pv. campestris RepID=Q4UZ06_XANC8 Length = 865 Score = 76.6 bits (187), Expect = 8e-13 Identities = 43/119 (36%), Positives = 62/119 (52%) Frame = +2 Query: 11 APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190 +P AL++L D R + + G G P SFC +T+ + ++ +PDA+ D RF + Sbjct: 48 SPMALISLLDADRQWFKARCGTDLEGT-PRSVSFCSYTVMGTD--LLEVPDAIADPRFTH 104 Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 N +V PG+R Y G PLI G+ GTLC +PR D ++ L LA V LE Sbjct: 105 NPLVTAAPGIRSYVGVPLIGREGYAYGTLCMLSTRPRVLDENQKQALIRLARQAVNQLE 163 [161][TOP] >UniRef100_Q4UVQ7 Putative uncharacterized protein n=2 Tax=Xanthomonas campestris pv. campestris RepID=Q4UVQ7_XANC8 Length = 334 Score = 76.6 bits (187), Expect = 8e-13 Identities = 46/129 (35%), Positives = 65/129 (50%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P AL++L D R + + G + + P +FC + + DQ+M + D D RF N Sbjct: 44 PMALISLIDQDRQWFKSRVG-MQPAETPRDLAFCAHAIL-QPDQMMEVGDTFVDPRFARN 101 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373 +V GGP +RFY G PL+ S+G +GTLC D PR + L LA VV +E Sbjct: 102 ALVTGGPQIRFYAGAPLLTSDGVALGTLCVLDRAPRTLSDAERTALQALARQVVTTIELR 161 Query: 374 IALQLRAHD 400 A +L D Sbjct: 162 QAARLLEGD 170 [162][TOP] >UniRef100_C5B0Z3 Sensor protein n=1 Tax=Methylobacterium extorquens AM1 RepID=C5B0Z3_METEA Length = 1125 Score = 76.6 bits (187), Expect = 8e-13 Identities = 44/121 (36%), Positives = 64/121 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F A ++L D R +++ G SFC T+A D ++V+PDA +D R Sbjct: 39 LFGVAIAYISLVDAERQWLKACVGIMPT-QTSRAGSFCDRTIAQ--DAMLVVPDARRDPR 95 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F E+V G P + FY G PLI G R+G+LC AD +PR+F L +LAE+V Sbjct: 96 FSGLEIVTGPPHIVFYAGAPLILRPGVRLGSLCLADSQPRDFTPEDAAALRDLAEIVTAQ 155 Query: 362 L 364 + Sbjct: 156 M 156 [163][TOP] >UniRef100_B1ZHF5 Sensor protein n=1 Tax=Methylobacterium populi BJ001 RepID=B1ZHF5_METPB Length = 1120 Score = 76.6 bits (187), Expect = 8e-13 Identities = 50/146 (34%), Positives = 70/146 (47%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F AA + L D R +++ G + P SFC T+ D I+ + DA +D R Sbjct: 39 LFGVAAAYICLVDAERQWLKACSGTMP-AETPREGSFCVRTI--EQDAILAVRDARRDPR 95 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +V G P V FY G PLI G R+G LC D +PR+F L +LAE+V Sbjct: 96 FSGLGIVTGPPHVVFYAGAPLILRPGVRLGALCLVDSQPRDFTPDDAAALRDLAEIV--- 152 Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRR 439 Q+R +N + A+ LRR Sbjct: 153 -----TAQMRLRRDNLVTASEKALRR 173 [164][TOP] >UniRef100_B0RRX7 Putative sensor protein n=1 Tax=Xanthomonas campestris pv. campestris str. B100 RepID=B0RRX7_XANCB Length = 377 Score = 76.6 bits (187), Expect = 8e-13 Identities = 46/129 (35%), Positives = 65/129 (50%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P AL++L D R + + G + + P +FC + + DQ+M + D D RF N Sbjct: 87 PMALISLIDQDRQWFKSRVG-MQPAETPRDLAFCAHAIL-QPDQMMEVGDTFVDPRFARN 144 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373 +V GGP +RFY G PL+ S+G +GTLC D PR + L LA VV +E Sbjct: 145 ALVTGGPQIRFYAGAPLLTSDGVALGTLCVLDRAPRTLSDAERTALQALARQVVTTIELR 204 Query: 374 IALQLRAHD 400 A +L D Sbjct: 205 QAARLLEGD 213 [165][TOP] >UniRef100_B0RNH7 Diguanylate cyclase sensor protein n=1 Tax=Xanthomonas campestris pv. campestris str. B100 RepID=B0RNH7_XANCB Length = 865 Score = 76.6 bits (187), Expect = 8e-13 Identities = 43/119 (36%), Positives = 62/119 (52%) Frame = +2 Query: 11 APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190 +P AL++L D R + + G G P SFC +T+ + ++ +PDA+ D RF + Sbjct: 48 SPMALISLLDADRQWFKARCGTDLEGT-PRSVSFCSYTVMGTD--LLEVPDAIADPRFTH 104 Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 N +V PG+R Y G PLI G+ GTLC +PR D ++ L LA V LE Sbjct: 105 NPLVTAAPGIRSYVGVPLIGREGYAYGTLCMLSTRPRVLDENQKQALIRLARQAVNQLE 163 [166][TOP] >UniRef100_C7C741 Sensor protein n=1 Tax=Methylobacterium extorquens DM4 RepID=C7C741_METED Length = 1125 Score = 76.6 bits (187), Expect = 8e-13 Identities = 44/121 (36%), Positives = 64/121 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F A ++L D R +++ G SFC T+A D ++V+PDA +D R Sbjct: 39 LFGVAIAYISLVDAERQWLKACVGIMPT-QTSRAGSFCDRTIAQ--DAMLVVPDARRDPR 95 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F E+V G P + FY G PLI G R+G+LC AD +PR+F L +LAE+V Sbjct: 96 FSGLEIVTGPPHIVFYAGAPLILRPGVRLGSLCLADSQPRDFTPEDAAALRDLAEIVTAQ 155 Query: 362 L 364 + Sbjct: 156 M 156 [167][TOP] >UniRef100_C4ZM83 Sensor protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZM83_THASP Length = 878 Score = 76.6 bits (187), Expect = 8e-13 Identities = 53/144 (36%), Positives = 71/144 (49%), Gaps = 3/144 (2%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF P ALV+L DD R + + A G P SFC + S +V+ DA +D R Sbjct: 41 IFGVPIALVSLVDDARQWFKSAHGLCV-AQTPRDVSFCTHVVFSNAP--LVVEDAARDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREF---DASRCVVLNNLAELV 352 F +N +V P VRFY G PL + G +GTLC D PR F + +R +L AE + Sbjct: 98 FADNPLVTAAPQVRFYAGEPLRSDQGFVLGTLCVIDTVPRRFEEAERARLRLLARQAEQL 157 Query: 353 VRHLEKDIALQLRAHDNNSLAAAY 424 +R K L A + +AA Y Sbjct: 158 IRLHRKRQRLADEARRSARIAARY 181 [168][TOP] >UniRef100_Q3BM12 Putative signal transduction protein n=1 Tax=Xanthomonas campestris pv. vesicatoria str. 85-10 RepID=Q3BM12_XANC5 Length = 598 Score = 76.3 bits (186), Expect = 1e-12 Identities = 40/119 (33%), Positives = 65/119 (54%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P ALV+L D+ R + + G + P +FC T+ + D +M + DA D RF +N Sbjct: 65 PIALVSLVDEHRQWWKANIGLPGVSETPRELAFCAHTI--QGDAVMEVRDAPADPRFHDN 122 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEK 370 +V PG+R+Y G P++ +G R+GT+C D +PR + ++ L LA + LE+ Sbjct: 123 ALVTDAPGIRYYAGAPIVLPDGLRMGTVCVIDQRPRALEPAQLQALQQLARVAAEGLEQ 181 [169][TOP] >UniRef100_B7L1C7 Sensor protein n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7L1C7_METC4 Length = 837 Score = 76.3 bits (186), Expect = 1e-12 Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 3/151 (1%) Frame = +2 Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187 +AP A + D R +I+ A G R + P FC T+A D I+V+P+ ++ Sbjct: 78 DAPMAHINFIDADRQWIKAAVGHDAR-EMPLHLGFCTQTLAE--DGILVLPNLKREPELA 134 Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 +N +V G P +RFY G PLI +G IGTLC D +PR + +L LA ++ LE Sbjct: 135 SNPLVTGAPHLRFYAGVPLITPDGWAIGTLCVLDREPRTLTTQQEFILKALARNIMAQLE 194 Query: 368 ---KDIALQLRAHDNNSLAAAYGXLRRTLDC 451 AL+ R + +A A L +DC Sbjct: 195 SRRSAAALRAREAELRLVADAMPVLIGFIDC 225 [170][TOP] >UniRef100_A0KTF2 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella sp. ANA-3 RepID=A0KTF2_SHESA Length = 322 Score = 76.3 bits (186), Expect = 1e-12 Identities = 45/121 (37%), Positives = 61/121 (50%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF P LV L D R + + +G + P S C A +D I V+ DALKD R Sbjct: 41 IFSLPICLVTLVDANRQWFKSRQG-IEVEQTPRDISLCAH--AINHDGIFVVHDALKDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 FC+N +V P +RFY G PL +R+GTLC +PR+F L +L ++V Sbjct: 98 FCDNPLVTEPPHIRFYVGYPLTIQGEYRVGTLCLIGNEPRDFTEEDAETLTDLGQMVEAE 157 Query: 362 L 364 L Sbjct: 158 L 158 [171][TOP] >UniRef100_Q08QL2 Sensor protein n=1 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q08QL2_STIAU Length = 421 Score = 76.3 bits (186), Expect = 1e-12 Identities = 48/129 (37%), Positives = 67/129 (51%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P ALV+L D R + + G + +FC + D++ V+PDA D RF +N Sbjct: 45 PVALVSLLDQGRQWFKARVGV-DAAETHRDLAFCAHAILQ--DELFVVPDAHLDERFQDN 101 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373 +V G P VRFY GTPL +NG +GTLC D PRE + L L+ R +E Sbjct: 102 PLVTGEPHVRFYAGTPLKTANGLNLGTLCVIDHVPRELKPEQTEAL----RLLGRQVESQ 157 Query: 374 IALQLRAHD 400 + L+LRA + Sbjct: 158 LQLRLRAQE 166 [172][TOP] >UniRef100_C5AK43 Putative GAF sensor protein n=1 Tax=Burkholderia glumae BGR1 RepID=C5AK43_BURGB Length = 372 Score = 76.3 bits (186), Expect = 1e-12 Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 2/134 (1%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F AP AL++L R + + G R + P W+FC +T+ + V+ DA +D+R Sbjct: 240 VFSAPIALISLVTTDRQWFKAHHGLGVR-ETPRIWAFCNYTILGDS---FVVEDAQQDSR 295 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +RFY G PL S+G+ +G+LC D PR+ + L LA+L+ Sbjct: 296 FKDNVLVTGAPQIRFYAGAPLRDSDGYALGSLCVIDQVPRKASDTGMDALRLLADLISSR 355 Query: 362 --LEKDIALQLRAH 397 L + + QL+ H Sbjct: 356 ICLAQKLREQLQRH 369 [173][TOP] >UniRef100_B4WG98 GGDEF domain protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WG98_9SYNE Length = 690 Score = 76.3 bits (186), Expect = 1e-12 Identities = 48/137 (35%), Positives = 68/137 (49%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 + + PA LV D R++++ GA + P +FC T+ R+ +VI DA + Sbjct: 41 VCQMPAGLVTFVDTNRLWVKARVGA-DISETPRYLAFCDQTI--RHVDTLVIEDAQQHPE 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F NN +V G P VRFY G PLI +G+ +GTLC D +PR + L L+ VV Sbjct: 98 FRNNPLVVGPPYVRFYAGHPLITPDGYALGTLCVLDYQPRRMSPQQINALRMLSHQVVAQ 157 Query: 362 LEKDIALQLRAHDNNSL 412 +E NNSL Sbjct: 158 MELSRQAHQLQQVNNSL 174 [174][TOP] >UniRef100_Q0HYE2 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella sp. MR-7 RepID=Q0HYE2_SHESR Length = 323 Score = 75.9 bits (185), Expect = 1e-12 Identities = 45/121 (37%), Positives = 62/121 (51%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF P LV L D R + + +G + + SFC A + + +I DALKD R Sbjct: 41 IFALPICLVTLVDANRQWFKSRQG-LEVTETSRDISFCAH--AINHSGVFIINDALKDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 FC+N +V P +RFY G PL +R+GTLC +PREF A L +L ++V Sbjct: 98 FCDNPLVIEPPHIRFYAGYPLTIHGEYRVGTLCLIGSEPREFSADDIETLTDLGQMVEAE 157 Query: 362 L 364 L Sbjct: 158 L 158 [175][TOP] >UniRef100_C0QFX2 Two-component hybrid protein, sensory box hisitidine kinase/adenylate cyclase n=1 Tax=Desulfobacterium autotrophicum HRM2 RepID=C0QFX2_DESAH Length = 378 Score = 75.9 bits (185), Expect = 1e-12 Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 3/136 (2%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P L++L D R + + G + P +FC + + IM++PDA D+RF +N Sbjct: 44 PICLISLVDSDRQWFKSKIG-LNVEETPRDQAFCAHAILEPD--IMIVPDATLDSRFFDN 100 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE-- 367 +V P +RFY G PLI G+ +GTLC D KPR+ + +L LA VV +E Sbjct: 101 PLVLKDPRIRFYAGAPLITPRGNELGTLCVIDQKPRKLTVEQVELLGILARQVVTQIELR 160 Query: 368 -KDIALQLRAHDNNSL 412 I L+ D+N+L Sbjct: 161 RTGIELRKAWEDSNNL 176 [176][TOP] >UniRef100_C7C538 Putative uncharacterized protein n=1 Tax=Enterobacter turicensis RepID=C7C538_9ENTR Length = 326 Score = 75.9 bits (185), Expect = 1e-12 Identities = 41/117 (35%), Positives = 63/117 (53%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F AP ALV+L D R++ + +G + + P SFC + ++ +++PD D R Sbjct: 41 LFNAPVALVSLVDQERLWFKSCDGYCVQ-EVPRDISFCAHAILK--NEPLIVPDTHNDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352 F +N +V G VRFY G P+ +G G+ C D PREF A +L +LA +V Sbjct: 98 FFDNPLVTGETNVRFYAGCPVHLPDGATAGSFCIIDNVPREFGAEEVAMLKDLAAIV 154 [177][TOP] >UniRef100_C1XPI5 Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Meiothermus silvanus DSM 9946 RepID=C1XPI5_9DEIN Length = 343 Score = 75.9 bits (185), Expect = 1e-12 Identities = 47/149 (31%), Positives = 72/149 (48%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I P AL++ D +R + + A+G + + P SFC + + V+ DA +D R Sbjct: 40 IGRTPIALISFIDRQRQWFKSAQG-LEIHEIPREASFCAHAILQHG--VTVVSDAWQDER 96 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F ++ +V G P +RFY G PLI NG +GT+C D +PR+ + L LA V+ Sbjct: 97 FADHPLVVGEPKIRFYAGAPLITPNGEALGTVCVMDRQPRQMEEEEQKALAALARQVMAQ 156 Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRRTLD 448 LE ++ R L A L+ D Sbjct: 157 LELRREIRERQRYQELLEEANARLKVLAD 185 [178][TOP] >UniRef100_B5JQD0 Sensor protein n=1 Tax=Verrucomicrobiae bacterium DG1235 RepID=B5JQD0_9BACT Length = 401 Score = 75.9 bits (185), Expect = 1e-12 Identities = 40/126 (31%), Positives = 70/126 (55%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I E P AL++L D+ R + + G + + +FC + ++++++PDA KD R Sbjct: 41 ICEVPIALISLIDEERQWFKAKVGLDAK-ETSRELAFCAHAILEP-EEMLLVPDATKDKR 98 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +RFY G+P++ + +GTLC D + RE + L +L++ V + Sbjct: 99 FRDNPLVTGAPDIRFYAGSPIVTHDRQALGTLCVIDTETRELSEKQKEALRHLSKQVCAN 158 Query: 362 LEKDIA 379 LE +A Sbjct: 159 LELRLA 164 [179][TOP] >UniRef100_A4B9Q6 Diguanylate cyclase, putative n=1 Tax=Reinekea blandensis MED297 RepID=A4B9Q6_9GAMM Length = 320 Score = 75.9 bits (185), Expect = 1e-12 Identities = 44/117 (37%), Positives = 62/117 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +FE P AL L D+ R + + G + + SFCG A ++ + LKDAR Sbjct: 41 MFEVPIALFTLVDENRQWFKSCFGVDLK-ETDREISFCGH--AINGHDTFIVENTLKDAR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352 F +N +V G PG+RFY GTP+ +G+ IGTLC D R F +L +LA L+ Sbjct: 98 FHDNPLVEGEPGIRFYAGTPVKTRDGYSIGTLCVMDRVARVFHPEDQAMLEDLARLL 154 [180][TOP] >UniRef100_Q3MCU9 Sensor protein n=1 Tax=Anabaena variabilis ATCC 29413 RepID=Q3MCU9_ANAVT Length = 1550 Score = 75.5 bits (184), Expect = 2e-12 Identities = 40/118 (33%), Positives = 60/118 (50%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P AL++L D R + + G +R + P +FC +T+ + + ++PDA D RF N Sbjct: 44 PIALISLIDQNRQWFKSKVG-LERRETPRDEAFCTYTILESD--VFIVPDATTDERFATN 100 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 +V P +RFY G PL G+ +GTLC D PR + L L V++ LE Sbjct: 101 PLVISDPKIRFYAGVPLTNPEGYSLGTLCVIDYIPRNLSPEQIEALQILGRQVIKQLE 158 [181][TOP] >UniRef100_Q319B9 GAF domain n=1 Tax=Prochlorococcus marinus str. MIT 9312 RepID=Q319B9_PROM9 Length = 249 Score = 75.5 bits (184), Expect = 2e-12 Identities = 42/118 (35%), Positives = 64/118 (54%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P +L+ L D R + + G + + WSFC T A + + ++I DA +D RF NN Sbjct: 46 PISLMTLVDKDRQWFKSKVG-LQISETRRDWSFC--THAIKENSPLIIHDAFQDERFINN 102 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 +V G P +RFY G PL S+G+++GTLC D KP + ++ L+ +V LE Sbjct: 103 PLVTGDPKIRFYAGFPLKTSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSRQIVSFLE 160 [182][TOP] >UniRef100_Q1GWG1 Signal transduction histidine kinase n=1 Tax=Sphingopyxis alaskensis RepID=Q1GWG1_SPHAL Length = 514 Score = 75.5 bits (184), Expect = 2e-12 Identities = 42/100 (42%), Positives = 59/100 (59%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+AP AL++L DD R + + A G + P SFC + ++Q +++ DA D R Sbjct: 67 LFDAPIALISLVDDCRQWFKSAHG-LDVPETPRDISFCKHVV--EDEQPLIVGDAASDPR 123 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR 301 F +N +V G P +RFY G PL A NG +GTLC D KPR Sbjct: 124 FQDNPLVTGEPYIRFYGGVPLFAYNGAILGTLCIIDRKPR 163 [183][TOP] >UniRef100_Q12JR1 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella denitrificans OS217 RepID=Q12JR1_SHEDO Length = 320 Score = 75.5 bits (184), Expect = 2e-12 Identities = 41/122 (33%), Positives = 66/122 (54%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F +LV+L D+ R + + +G + SFCG A D + +IPD +DAR Sbjct: 41 MFGVQISLVSLVDENRQWFKSKQG-LDAEETSREISFCGH--AINQDGLFIIPDTNEDAR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PL +G +GTLC D KP+ D+ +LN+L ++ + Sbjct: 98 FADNPLVTDAPNIRFYAGYPLKLRHGINLGTLCLIDSKPKILDSEDRQLLNDLGAMIEQE 157 Query: 362 LE 367 ++ Sbjct: 158 IK 159 [184][TOP] >UniRef100_A2BY81 GAF domain n=1 Tax=Prochlorococcus marinus str. MIT 9515 RepID=A2BY81_PROM5 Length = 238 Score = 75.5 bits (184), Expect = 2e-12 Identities = 42/118 (35%), Positives = 67/118 (56%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P +L+ L D + + + G + + WSFC T A + + ++I DA +D RF NN Sbjct: 46 PISLMTLVDRDKQWFKSKVG-LEISETKRDWSFC--THAIQENSPLIIEDAFQDERFINN 102 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 +V G P +RFY G PL S+G+++GTLC D KP +++ V+ L++ +V LE Sbjct: 103 PLVTGDPKIRFYAGFPLKNSDGNKLGTLCVIDRKPGNLSSNQYNVMELLSKQIVSFLE 160 [185][TOP] >UniRef100_C2HZG0 GGDEF domain protein n=1 Tax=Vibrio cholerae bv. albensis VL426 RepID=C2HZG0_VIBCH Length = 351 Score = 75.5 bits (184), Expect = 2e-12 Identities = 40/121 (33%), Positives = 63/121 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P AL++L D+ R + + G + SFCG + + ++ VI DA +D R Sbjct: 68 LFNVPIALISLVDENRQWFKSCYG-LNVSETSRDISFCGHAILGK--KVFVIEDASQDPR 124 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PL+ + +GTLC D KPR+ + +LA++ R Sbjct: 125 FADNPLVTDAPNIRFYAGVPLLYEDSLALGTLCIIDTKPRQLTQDELLDFYDLAKMAERE 184 Query: 362 L 364 L Sbjct: 185 L 185 [186][TOP] >UniRef100_B6ALC1 Diguanylate cyclase with GAF sensor n=1 Tax=Leptospirillum sp. Group II '5-way CG' RepID=B6ALC1_9BACT Length = 322 Score = 75.5 bits (184), Expect = 2e-12 Identities = 43/121 (35%), Positives = 61/121 (50%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P ALV L D+ R + + G + P SFCG + + +IPDA D R Sbjct: 41 LFNVPIALVTLVDEDRQWFKSNMG-LAVSETPRSVSFCGHAILQ--EDFFIIPDARSDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +RFY G L + +IGTLC D +PR + +VL +L L + Sbjct: 98 FSDNPLVLGDPRIRFYAGCVLRTQDNQKIGTLCLIDHEPRAMEPQDLLVLEDLTSLAEQE 157 Query: 362 L 364 L Sbjct: 158 L 158 [187][TOP] >UniRef100_B4VLP5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VLP5_9CYAN Length = 568 Score = 75.5 bits (184), Expect = 2e-12 Identities = 40/118 (33%), Positives = 60/118 (50%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P AL++L D R + + G P +FC + + D IMV+P+AL+D RF N Sbjct: 96 PIALISLIDQNRQWFKSKVG-IDATQTPRDQAFCAHAILNPED-IMVVPNALEDERFAGN 153 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 +V P +RFY G PL+ +G +GTLC D P + + L L+ V+ +E Sbjct: 154 PLVTSDPNIRFYAGAPLVTEDGFPLGTLCVIDQIPHDLTPQQISALQALSRQVINQME 211 [188][TOP] >UniRef100_A8TK82 Sensor protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TK82_9PROT Length = 417 Score = 75.5 bits (184), Expect = 2e-12 Identities = 41/116 (35%), Positives = 62/116 (53%) Frame = +2 Query: 20 ALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEM 199 A ++L D R++ + A G + P SFC + A + ++M I D D F N + Sbjct: 46 AFISLVDAERVWFKSAFGVEGVREMPRHQSFC--SHAITDPRVMEIEDTWSDPVFAENPL 103 Query: 200 VRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 V G P RFY G PLI +G+R+GTLC +PR+ D + L +L+++ R LE Sbjct: 104 VTGPPHTRFYAGAPLILRSGYRVGTLCVLGDQPRKLDDDQRASLIDLSQIATRFLE 159 [189][TOP] >UniRef100_Q9RZS0 GGDEF family protein n=1 Tax=Deinococcus radiodurans RepID=Q9RZS0_DEIRA Length = 516 Score = 75.1 bits (183), Expect = 2e-12 Identities = 50/148 (33%), Positives = 69/148 (46%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I PAA + D R + + GA +R P S C WT+ D +V+ +A D R Sbjct: 42 ILRTPAAYINFVDQSRQWTKACVGA-ERDSKPLSESMCAWTILQ--DAPLVVENARLDRR 98 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F + ++V G ++ Y G PL +GHRIGTLC D + L +LA LV+ Sbjct: 99 FSHMQLVTGEASLQMYAGVPLTTPSGHRIGTLCVTDNQCHPLGDEDIQALQDLAALVMTE 158 Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRRTL 445 LE A Q D + + LRRTL Sbjct: 159 LELRAANQELQRDLQAASCQSEELRRTL 186 [190][TOP] >UniRef100_Q8PPS5 Histidine kinase-response regulator hybrid protein n=1 Tax=Xanthomonas axonopodis pv. citri RepID=Q8PPS5_XANAC Length = 880 Score = 75.1 bits (183), Expect = 2e-12 Identities = 48/119 (40%), Positives = 59/119 (49%) Frame = +2 Query: 11 APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190 AP A+V+L D R + + G G P SFC + A ++M +PDA D RF N Sbjct: 70 APMAMVSLLDADRQWFKARCGTDLEGT-PRSVSFC--SHAVMGTELMEVPDAEADPRFVN 126 Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 N +V PGVR Y G PLI G+ GTLC PR D +R L LA V LE Sbjct: 127 NPLVVAAPGVRSYVGVPLIGREGYAYGTLCTLSTTPRVLDENRKQALIRLARQAVNKLE 185 [191][TOP] >UniRef100_Q3BSA9 Putative sensor protein n=1 Tax=Xanthomonas campestris pv. vesicatoria str. 85-10 RepID=Q3BSA9_XANC5 Length = 361 Score = 75.1 bits (183), Expect = 2e-12 Identities = 45/125 (36%), Positives = 63/125 (50%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P AL++L D R + + G ++ + P SFC + DQ+M + D D RF N Sbjct: 68 PMALISLVDTHRQWFKSRLG-MQQSETPRELSFCAHAILEP-DQVMEVGDTHLDKRFARN 125 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373 +V G P +RFY G PL+ +G +GTLC D PR A+ L LA VV +E Sbjct: 126 ALVTGEPQIRFYAGAPLLTPDGIALGTLCVLDRVPRRLSATERDALQALARQVVSTIELQ 185 Query: 374 IALQL 388 A +L Sbjct: 186 QAARL 190 [192][TOP] >UniRef100_B7KR27 Signal transduction histidine kinase n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KR27_METC4 Length = 1016 Score = 75.1 bits (183), Expect = 2e-12 Identities = 46/129 (35%), Positives = 65/129 (50%) Frame = +2 Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187 EAP A++ L D R F + G R + P SFC A +D + +PD +D RF Sbjct: 56 EAPIAVINLVGDGRQFFKAEVGLGVR-ETPLETSFC--RQAILHDDFLYVPDTARDPRFE 112 Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 N +V G PG+RFY G L G IGT+C D +PRE + + L LA + +E Sbjct: 113 GNPLVSGDPGLRFYAGALLRTDEGQPIGTVCVLDTRPRELSERQRLGLMRLARQAMTQME 172 Query: 368 KDIALQLRA 394 +L+ +A Sbjct: 173 LRRSLREQA 181 [193][TOP] >UniRef100_A4TE01 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Mycobacterium gilvum PYR-GCK RepID=A4TE01_MYCGI Length = 603 Score = 75.1 bits (183), Expect = 2e-12 Identities = 40/122 (32%), Positives = 63/122 (51%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 + + P AL+ D R +++ +G + SFC TM D ++ IPD D+R Sbjct: 58 VCDVPMALIGFLDAERQWLKSRQGV-GHSEIARELSFCASTMGD-GDTLIEIPDTRLDSR 115 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 + MV G P +RFY G P+ + GH +GT+C DV+PR ++ L LA+ V+ Sbjct: 116 LAGHPMVTGDPHLRFYAGMPIRTAEGHALGTICVMDVEPRTLSDAQRSHLRTLADQVMNL 175 Query: 362 LE 367 L+ Sbjct: 176 LD 177 [194][TOP] >UniRef100_B4D9S4 Sensor protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9S4_9BACT Length = 683 Score = 75.1 bits (183), Expect = 2e-12 Identities = 44/120 (36%), Positives = 63/120 (52%) Frame = +2 Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187 E P A+V L DDRR +++ G + P +FC + D++MV+ DA D RF Sbjct: 44 ETPVAMVTLLDDRRQWLKARLGTHIT-ETPLAHAFCALAI-EHPDEVMVVTDARYDERFR 101 Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 N V G +RFY G P++ +G IGTLC D +PR A++ +L LA V +E Sbjct: 102 GNPYVTGYQKIRFYAGAPMVTPDGVPIGTLCVIDRQPRHISAAKRELLKALAHEAVSLME 161 [195][TOP] >UniRef100_A5P8W2 Putative uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P8W2_9SPHN Length = 507 Score = 75.1 bits (183), Expect = 2e-12 Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 1/102 (0%) Frame = +2 Query: 2 IFEAPAALVALFD-DRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDA 178 +F AP A+V++ + DR+ F+ A + P SFC M MVIPDA +D Sbjct: 53 LFGAPMAMVSIVEKDRQAFL--ARTGIEADGTPRNVSFCAHAMLGAEP--MVIPDATQDP 108 Query: 179 RFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE 304 RF N +V G P VRFY G PL+++ G +G LC D +PRE Sbjct: 109 RFAENALVTGSPHVRFYAGYPLVSTEGAPLGALCVIDTEPRE 150 [196][TOP] >UniRef100_Q5ZVF0 Adenylate cyclase PLUS two component hybrid sensor and regulator n=1 Tax=Legionella pneumophila subsp. pneumophila str. Philadelphia 1 RepID=Q5ZVF0_LEGPH Length = 441 Score = 74.7 bits (182), Expect = 3e-12 Identities = 46/128 (35%), Positives = 64/128 (50%), Gaps = 5/128 (3%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGA----FKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 P A ++ D + + + G R D SFC +T+ + ++ M+I D L D R Sbjct: 77 PIAFISFIDSEHQWFKSSCGIGLNKISRND-----SFCHYTI--QQNKPMIISDTLLDER 129 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 FCNN V P +RFY G PL +G +GTLC D KPR D + +L +LA L Sbjct: 130 FCNNPYVTSEPNIRFYAGFPLSTVDGFNVGTLCAIDKKPRNLDETEIQILKDLATLAEDQ 189 Query: 362 LE-KDIAL 382 L DI+L Sbjct: 190 LNLLDISL 197 [197][TOP] >UniRef100_A1T6X4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Mycobacterium vanbaalenii PYR-1 RepID=A1T6X4_MYCVP Length = 599 Score = 74.7 bits (182), Expect = 3e-12 Identities = 48/143 (33%), Positives = 72/143 (50%) Frame = +2 Query: 11 APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190 AP AL++ D R +I+ G + SFC T+A+ + ++ IPD D RF Sbjct: 61 APMALLSFVDATRQWIKSRHGV-DVAEIDREVSFCARTLAAAS--LLEIPDTHLDPRFAP 117 Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEK 370 + MV G P VRFY G P++ +GH +G LC D +PR + V L LA+ V+ L+ Sbjct: 118 HPMVTGDPHVRFYAGVPIVTGDGHALGALCVMDREPRTLSDPQRVHLQTLADQVLTLLQL 177 Query: 371 DIALQLRAHDNNSLAAAYGXLRR 439 + A + + AA LR+ Sbjct: 178 RSRTRQTASEIDRRLAADAALRQ 200 [198][TOP] >UniRef100_A6EHA0 Sensor protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EHA0_9SPHI Length = 814 Score = 74.7 bits (182), Expect = 3e-12 Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 4/128 (3%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I P +L+ L D+ R + + G + + P +FC +T+ R ++ +PD D R Sbjct: 43 ICNVPISLITLIDETRQWFKSRTG-LEISETPREVAFCQYTIMDR--EVFEVPDTWNDER 99 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLA----EL 349 F +N +V G PG+RFY G PL +G+ +GTLC D KP + + L L+ +L Sbjct: 100 FRSNVLVTGDPGIRFYAGYPLTDPDGYALGTLCVIDRKPNQLTPQQHTALRLLSAEVMQL 159 Query: 350 VVRHLEKD 373 +V +K+ Sbjct: 160 IVERRQKE 167 [199][TOP] >UniRef100_A1ZZA0 Multi-sensor Hybrid Histidine Kinase n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZZA0_9SPHI Length = 455 Score = 74.7 bits (182), Expect = 3e-12 Identities = 46/138 (33%), Positives = 68/138 (49%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I E P +L++L + + + + G R + P SFC A + V+ DA KD R Sbjct: 41 ICETPVSLMSLVAEDKQWFKAKVGLEPR-EAPRELSFCAH--AIHTPDLFVVKDATKDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N V P VRFY G PL +G +GTLC D +PR+ D ++ L LA V+ Sbjct: 98 FHDNPFVADHPKVRFYAGMPLTTPDGFNLGTLCVIDQRPRDLDEAQKKALKTLAAQVIAQ 157 Query: 362 LEKDIALQLRAHDNNSLA 415 LE + L+ + +A Sbjct: 158 LELRLKLKTIGQEKRVIA 175 [200][TOP] >UniRef100_Q2JR31 Sensor protein n=1 Tax=Synechococcus sp. JA-3-3Ab RepID=Q2JR31_SYNJA Length = 1523 Score = 74.3 bits (181), Expect = 4e-12 Identities = 43/118 (36%), Positives = 61/118 (51%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P ALV+L D+ R + + G + + P +FC + S + + V+PDA +D RF +N Sbjct: 45 PIALVSLIDEHRQWFKAKFGVDVQ-ETPRDVAFCAHAILSPQEPL-VVPDATQDPRFADN 102 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 V P +RFY G PL+ G +GTLC D +PR + L LA VV LE Sbjct: 103 PFVTQEPHIRFYAGIPLVTPEGQALGTLCVVDYQPRHLTPEQLEQLQALAHQVVAQLE 160 [201][TOP] >UniRef100_Q2JP01 Sensor protein n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13) RepID=Q2JP01_SYNJB Length = 1526 Score = 74.3 bits (181), Expect = 4e-12 Identities = 43/118 (36%), Positives = 61/118 (51%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P ALV+L D+ R + + G + + P +FC + S + + V+PDA +D RF +N Sbjct: 45 PIALVSLIDEHRQWFKAKFGVDVQ-ETPRDVAFCAHAILSPKEPL-VVPDATQDPRFADN 102 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 V P +RFY G PL+ G +GTLC D +PR + L LA VV LE Sbjct: 103 PFVAQEPHIRFYAGIPLVTPEGQALGTLCVVDYQPRHLTPEQLEQLQALAHQVVAQLE 160 [202][TOP] >UniRef100_B2FT01 Putative GGDEF GAF signalling protein n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FT01_STRMK Length = 572 Score = 74.3 bits (181), Expect = 4e-12 Identities = 41/102 (40%), Positives = 58/102 (56%) Frame = +2 Query: 107 SFCGWTMASRNDQIMVIPDALKDARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFA 286 SFC T A R D++ IPDA +D RF N +V GGP +R Y G PL +++G RIGTLC Sbjct: 69 SFC--THAIRQDELFEIPDARQDPRFSTNPLVTGGPRIRHYAGIPLGSTHGARIGTLCLL 126 Query: 287 DVKPREFDASRCVVLNNLAELVVRHLEKDIALQLRAHDNNSL 412 D P S+ ++ +LA + + LE+ L + N+L Sbjct: 127 DPMPGVLSPSQRELMVHLARVTTQVLEQRSTLMAQVGQANAL 168 [203][TOP] >UniRef100_B1JAA2 Diguanylate cyclase with GAF sensor n=1 Tax=Pseudomonas putida W619 RepID=B1JAA2_PSEPW Length = 345 Score = 74.3 bits (181), Expect = 4e-12 Identities = 40/115 (34%), Positives = 62/115 (53%) Frame = +2 Query: 23 LVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEMV 202 L++L D R + + G + P SFCG+ + + +++PDA +D RF +N +V Sbjct: 48 LISLIDQERQWFKARIG-LAASETPRNVSFCGYAILG--EDTLLVPDATRDPRFVDNPLV 104 Query: 203 RGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 P +RFY G PL A NG IGTLC D +PR + ++ +LA L +L+ Sbjct: 105 LSAPYIRFYAGHPLRAGNGKAIGTLCMLDPRPRTLNETQQANFKDLATLAEGYLQ 159 [204][TOP] >UniRef100_A4FHE2 Putative regulatory protein n=1 Tax=Saccharopolyspora erythraea NRRL 2338 RepID=A4FHE2_SACEN Length = 443 Score = 74.3 bits (181), Expect = 4e-12 Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 5/156 (3%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGW-----TMASRNDQIMVIPDA 166 + +AP A V L DD RI+ FK G R + G A D+ V+ DA Sbjct: 48 LLDAPIATVTLVDDERIW-------FKAGHGSRRLTHTGREPGLAASAIGQDEPYVVRDA 100 Query: 167 LKDARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAE 346 L D R + +V G PGVRFY P+ +G+R+GT+ D +PR+ A L++LA Sbjct: 101 LNDPRTARHPLVTGEPGVRFYAAAPITTLDGYRLGTVDVYDTRPRDIGARDLEALSDLAG 160 Query: 347 LVVRHLEKDIALQLRAHDNNSLAAAYGXLRRTLDCF 454 +V+ LE ++ S A R T++ F Sbjct: 161 VVIDELELRLSALTTVRAERSRRQASDRTRETMEGF 196 [205][TOP] >UniRef100_Q0FZZ8 Putative signal transduction histidine kinase with GAF domain n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FZZ8_9RHIZ Length = 383 Score = 74.3 bits (181), Expect = 4e-12 Identities = 46/122 (37%), Positives = 65/122 (53%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 + EAP ALV+ D+ R F + GA +R + P SFC A + + +IPDA KD R Sbjct: 42 VCEAPIALVSFLDEHRDFFKAEVGAGRR-EAPRETSFC--RHAVLQEHLTIIPDASKDPR 98 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G + +G IGT+C D+KPR + ++ L LA Sbjct: 99 FQHNPLVVDDPKLRFYAGAAIETPDGIPIGTVCVFDLKPRTLNENQGRTLKLLARQARTQ 158 Query: 362 LE 367 LE Sbjct: 159 LE 160 [206][TOP] >UniRef100_A0NUT0 PAS:GGDEF protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NUT0_9RHOB Length = 1124 Score = 74.3 bits (181), Expect = 4e-12 Identities = 40/101 (39%), Positives = 57/101 (56%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IFEAP A +++ ++ + G D P +FC + SR+ +MV+PDA +DAR Sbjct: 40 IFEAPIAFISIVGKDDLWYKAGTGIALE-DTPRSGTFCDQAILSRD--VMVVPDAHEDAR 96 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE 304 F N+ +V G P +RFY G PL H +G LC D KPR+ Sbjct: 97 FRNSRLVCGPPHIRFYAGYPLSLDGTHILGALCVVDTKPRQ 137 [207][TOP] >UniRef100_Q8PJT4 Putative uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. citri RepID=Q8PJT4_XANAC Length = 346 Score = 73.9 bits (180), Expect = 5e-12 Identities = 45/125 (36%), Positives = 62/125 (49%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P AL++L D R + + G ++ + P SFC + DQ+M + D D RF N Sbjct: 53 PMALISLVDTHRQWFKSRIG-MQQNETPRELSFCAHAILEP-DQVMEVGDTHLDERFVGN 110 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373 +V G P +RFY G PL+ +G +GTLC D PR + L LA VV LE Sbjct: 111 ALVTGEPQIRFYAGAPLLTPDGIALGTLCVLDRVPRRLSVAERDALQALARQVVSTLELQ 170 Query: 374 IALQL 388 A +L Sbjct: 171 QAARL 175 [208][TOP] >UniRef100_Q7U6L9 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 8102 RepID=Q7U6L9_SYNPX Length = 233 Score = 73.9 bits (180), Expect = 5e-12 Identities = 46/122 (37%), Positives = 64/122 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I AP AL++L D R + + G ++ SFC T+ N Q +++ DAL D R Sbjct: 41 ICHAPIALISLVDQSRQWFKSRVGCDQQ-QTERDISFCAHTIL--NPQPLIVEDALFDQR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +VR P +R Y G PL N RIGTLC D P+ + + V+ LA+ VV Sbjct: 98 FQDNPLVREDPNIRLYAGFPLNTPNDQRIGTLCVIDRMPKSLTSIQIQVMKRLADQVVTL 157 Query: 362 LE 367 LE Sbjct: 158 LE 159 [209][TOP] >UniRef100_Q31MP6 Diguanylate cyclase with GAF sensor n=2 Tax=Synechococcus elongatus RepID=Q31MP6_SYNE7 Length = 506 Score = 73.9 bits (180), Expect = 5e-12 Identities = 46/132 (34%), Positives = 66/132 (50%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I E P AL++L D R + + G + P SFCG A + + + ++ DA D R Sbjct: 41 ICEVPIALISLIDRDRQWFKSRVG-LEDDSSPRSTSFCGH--AIQQEDLFIVEDAKADPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N V P +RFY G+PLI + +GTLC D KPR + + L L+ V+R Sbjct: 98 FVDNPFVTQEPHIRFYAGSPLITDDEQILGTLCVIDRKPRHLNDLQQQALRILSRQVIRE 157 Query: 362 LEKDIALQLRAH 397 LE +L H Sbjct: 158 LELRRSLYQAEH 169 [210][TOP] >UniRef100_Q0I9R3 GAF domain protein n=1 Tax=Synechococcus sp. CC9311 RepID=Q0I9R3_SYNS3 Length = 251 Score = 73.9 bits (180), Expect = 5e-12 Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 6/159 (3%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P AL++L D R + + A+ + + WSFC + S + +++ DALKD RF +N Sbjct: 45 PIALLSLVDSDRQWFK-AKVGIEAEETVRDWSFCAHAIHS--SEPLIVEDALKDERFFDN 101 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE-- 367 +V+G P +R Y G PL HRIGTLC D +P + ++ +L+ V LE Sbjct: 102 PLVKGDPKIRLYAGFPLQNDENHRIGTLCVIDREPHGLTDIQFSIMESLSRQAVAFLELR 161 Query: 368 ----KDIALQLRAHDNNSLAAAYGXLRRTLDCFDHCVAL 472 K I DN ++ + R+ D H + L Sbjct: 162 KRSIKLIESYCSLADNGNIISTCSYCRKAKDTDGHWLHL 200 [211][TOP] >UniRef100_Q0HFI8 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella sp. MR-4 RepID=Q0HFI8_SHESM Length = 323 Score = 73.9 bits (180), Expect = 5e-12 Identities = 43/121 (35%), Positives = 62/121 (51%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF P +V L D R + + +G + + P SFC A +D + ++ DALKD R Sbjct: 41 IFALPICVVTLVDANRQWFKSRQG-LEVTETPRDISFCAH--AINHDGVFIVNDALKDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V P +RFY G PL +R+GTLC +PREF L +L ++V Sbjct: 98 FFDNPLVTEPPHIRFYAGYPLTIQGEYRVGTLCLIGNEPREFSDDDIETLTDLGQMVEAE 157 Query: 362 L 364 L Sbjct: 158 L 158 [212][TOP] >UniRef100_Q01ZT7 Sensor protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076 RepID=Q01ZT7_SOLUE Length = 686 Score = 73.9 bits (180), Expect = 5e-12 Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 1/122 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+AP A+++ + R+F + G + SFC T+ S + +MV+PDA KD R Sbjct: 41 LFQAPIAVISFVEQSRLFFKSHFG-LEISQISSHGSFCAHTILSND--VMVVPDAAKDPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358 F + + GG +RFY G PLI G+R+G L D +PR L +LA LV+ Sbjct: 98 FASAPVTVGGLRIRFYAGAPLITPAGYRLGALAVMDTRPRPALTEDETATLVDLAGLVMH 157 Query: 359 HL 364 L Sbjct: 158 DL 159 [213][TOP] >UniRef100_C5AX24 Putative histidine kinase of the HWE family n=1 Tax=Methylobacterium extorquens AM1 RepID=C5AX24_METEA Length = 998 Score = 73.9 bits (180), Expect = 5e-12 Identities = 47/129 (36%), Positives = 64/129 (49%) Frame = +2 Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187 EAP A+V L D R F + G R + P SFC A +D + +PD +D RF Sbjct: 38 EAPIAVVNLVGDGRQFFKAEVGLGVR-ETPLETSFC--RQAILHDDFLYVPDTARDPRFE 94 Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 N +V G PG+RFY G L G IGT+C D +PRE + L LA + +E Sbjct: 95 GNPLVSGDPGLRFYAGALLRTDEGQPIGTVCVLDTRPRELSERQRRGLMRLARQAMTQME 154 Query: 368 KDIALQLRA 394 +L+ +A Sbjct: 155 LRRSLREQA 163 [214][TOP] >UniRef100_A9W3M5 Sensor protein n=1 Tax=Methylobacterium extorquens PA1 RepID=A9W3M5_METEP Length = 1125 Score = 73.9 bits (180), Expect = 5e-12 Identities = 43/121 (35%), Positives = 63/121 (52%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F A ++L D R +++ G SFC T+A D ++V+PDA +D R Sbjct: 39 LFGVAIAYISLVDAERQWLKACVGIMPT-QTSRAGSFCDRTIAQ--DAMLVVPDARRDPR 95 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F E+V G P + FY G PLI G R+G+LC AD +P +F L +LAE+V Sbjct: 96 FSGLEIVTGPPHIVFYAGAPLILRPGVRLGSLCLADSQPGDFTPEDAAALRDLAEIVTAQ 155 Query: 362 L 364 + Sbjct: 156 M 156 [215][TOP] >UniRef100_A9W1Y6 PAS sensor protein n=1 Tax=Methylobacterium extorquens PA1 RepID=A9W1Y6_METEP Length = 1041 Score = 73.9 bits (180), Expect = 5e-12 Identities = 47/129 (36%), Positives = 64/129 (49%) Frame = +2 Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187 EAP A+V L D R F + G R + P SFC A +D + +PD +D RF Sbjct: 81 EAPIAVVNLVGDGRQFFKAEVGLGVR-ETPLETSFC--RQAILHDDFLYVPDTARDPRFE 137 Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 N +V G PG+RFY G L G IGT+C D +PRE + L LA + +E Sbjct: 138 GNPLVSGDPGLRFYAGALLRTDEGQPIGTVCVLDTRPRELSERQRRGLMRLARQAMTQME 197 Query: 368 KDIALQLRA 394 +L+ +A Sbjct: 198 LRRSLREQA 206 [216][TOP] >UniRef100_Q1YE85 Possible sensor histidine kinase with GAF domain n=1 Tax=Aurantimonas manganoxydans SI85-9A1 RepID=Q1YE85_MOBAS Length = 514 Score = 73.9 bits (180), Expect = 5e-12 Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 1/143 (0%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P A+V D R F + G R + P SFC + + + +M++PDA +D+RF NN Sbjct: 68 PIAVVNFVSDTRQFFKAEVGLGVR-ETPVDISFCKHALLA--EDMMIVPDATQDSRFDNN 124 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373 +V G P +RFY G + ++ G +GT+C D PRE DA + L R L + Sbjct: 125 PLVYGDPPLRFYAGVLVRSAEGLPLGTMCVLDHTPRELDAHQIRTL--------RLLARQ 176 Query: 374 IALQLRAHDN-NSLAAAYGXLRR 439 +++QL H + AA G +RR Sbjct: 177 VSIQLELHRSLRRTKAALGDVRR 199 [217][TOP] >UniRef100_A8GEI1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Serratia proteamaculans 568 RepID=A8GEI1_SERP5 Length = 624 Score = 73.6 bits (179), Expect = 7e-12 Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 3/127 (2%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184 F AL++L D R + G R + P SFCG + R+ +V+PD D RF Sbjct: 42 FGVSIALISLIDRERQWFLSRSGLEAR-ESPRNISFCGHAILQRD--ALVVPDTAADPRF 98 Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364 +N +V GGP + FY G PL++ +G +GTLC D P+ F + L + A ++ +L Sbjct: 99 FDNPLVTGGPKIGFYAGQPLLSLDGLPLGTLCIIDGHPQAFSSEMVHDLRDFAAVIEEYL 158 Query: 365 ---EKDI 376 E+DI Sbjct: 159 HSIERDI 165 [218][TOP] >UniRef100_A8G6I2 GAF domain n=1 Tax=Prochlorococcus marinus str. MIT 9215 RepID=A8G6I2_PROM2 Length = 249 Score = 73.6 bits (179), Expect = 7e-12 Identities = 41/118 (34%), Positives = 65/118 (55%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P +L+ L D + + + G + + WSFC T A + + ++I DA +D RF NN Sbjct: 46 PISLMTLVDKDKQWFKSKIG-LQISETRRDWSFC--THAIKENSPLIIHDAFQDERFINN 102 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 +V G P +RFY G PL S+G+++GTLC D KP + ++ L++ +V LE Sbjct: 103 PLVTGDPKIRFYAGFPLRNSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSKQIVSFLE 160 [219][TOP] >UniRef100_A2BSU4 GAF domain-containing protein n=1 Tax=Prochlorococcus marinus str. AS9601 RepID=A2BSU4_PROMS Length = 249 Score = 73.6 bits (179), Expect = 7e-12 Identities = 41/118 (34%), Positives = 65/118 (55%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P +L+ L D + + + G + + WSFC T A + + ++I DA +D RF NN Sbjct: 46 PISLMTLVDKDKQWFKSKIG-LQISETRRDWSFC--THAIKENSPLIIHDAFQDERFINN 102 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 +V G P +RFY G PL S+G+++GTLC D KP + ++ L++ +V LE Sbjct: 103 PLVTGDPKIRFYAGFPLRNSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSKQIVSFLE 160 [220][TOP] >UniRef100_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Vibrio furnissii CIP 102972 RepID=C9PLR8_VIBFU Length = 1097 Score = 73.6 bits (179), Expect = 7e-12 Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 2/132 (1%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEG--AFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKD 175 +F+ P L++L D R + + G A + G SFCG + ++ I+++ DA KD Sbjct: 41 VFKVPICLISLVDSDRQWFKSKVGLDACETGR---DISFCGHAIL--HEDILIVSDATKD 95 Query: 176 ARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVV 355 RF +N +V P +RFY G PL ++G IGTLC D R+F A L A++V Sbjct: 96 ERFSSNPLVTHAPHIRFYAGAPLRETSGQPIGTLCLIDSVARDFSAKEQQELREFADMVE 155 Query: 356 RHLEKDIALQLR 391 + K+ +L+ Sbjct: 156 YEIAKEDQARLQ 167 [221][TOP] >UniRef100_B9P3H6 GAF domain-containing protein n=1 Tax=Prochlorococcus marinus str. MIT 9202 RepID=B9P3H6_PROMA Length = 249 Score = 73.6 bits (179), Expect = 7e-12 Identities = 41/118 (34%), Positives = 65/118 (55%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P +L+ L D + + + G + + WSFC T A + + ++I DA +D RF NN Sbjct: 46 PISLMTLVDKDKQWFKSKIG-LQISETRRDWSFC--THAIKENSPLIIHDAFQDERFINN 102 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 +V G P +RFY G PL S+G+++GTLC D KP + ++ L++ +V LE Sbjct: 103 PLVTGDPKIRFYAGFPLRNSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSKQIVSFLE 160 [222][TOP] >UniRef100_A4C1I1 Sensor protein n=1 Tax=Polaribacter irgensii 23-P RepID=A4C1I1_9FLAO Length = 399 Score = 73.6 bits (179), Expect = 7e-12 Identities = 43/118 (36%), Positives = 63/118 (53%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P ALV++ + + + G + + P +SFC ++ + D++ +I DA KD RF NN Sbjct: 45 PIALVSIIGKNKQWFKSHHGLAAK-ETPREFSFCAHSILN-TDELFIINDATKDDRFANN 102 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 + G P V FY G PL +S G +GTLC D KP + + L LA+ VV LE Sbjct: 103 PLTIGAPNVVFYAGAPLNSSEGFPLGTLCVIDNKPNALNKRQQQSLKLLAKQVVNLLE 160 [223][TOP] >UniRef100_UPI0000382D47 COG2203: FOG: GAF domain n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000382D47 Length = 297 Score = 73.2 bits (178), Expect = 9e-12 Identities = 47/129 (36%), Positives = 63/129 (48%) Frame = +2 Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187 E P A+V L D R F + G R + P SFC A + + IPDA D RF Sbjct: 43 ETPIAVVNLVGDGRQFFKAEVGLGVR-ETPLDTSFC--RHAILEEDFLYIPDAASDPRFA 99 Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 N +V G PG+RFY G L + GH +GT+C D KP + + L LA + +E Sbjct: 100 GNPLVTGEPGLRFYAGALLKTAEGHPVGTVCVLDTKPHDLTERQRKGLVRLARQTMAQME 159 Query: 368 KDIALQLRA 394 AL+ +A Sbjct: 160 LRRALREQA 168 [224][TOP] >UniRef100_Q8PIT5 Putative uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv. citri RepID=Q8PIT5_XANAC Length = 356 Score = 73.2 bits (178), Expect = 9e-12 Identities = 45/124 (36%), Positives = 63/124 (50%) Frame = +2 Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187 E A V L D+ R + + A GA R + P SFC + R D+++++ D L D RF Sbjct: 43 ETQMAAVVLVDEDRQWFKSAHGA-PRSEAPRDISFCAHAIL-RPDEVLMVDDTLLDPRFH 100 Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 +N MV G GVRFY G PL+ S G +G+LC D P + L L+ + LE Sbjct: 101 DNPMVVGSGGVRFYAGAPLVTSQGMALGSLCVFDQAPAHLREDQREALQALSRQASQLLE 160 Query: 368 KDIA 379 +A Sbjct: 161 LRLA 164 [225][TOP] >UniRef100_B1XP38 Sensor protein n=1 Tax=Synechococcus sp. PCC 7002 RepID=B1XP38_SYNP2 Length = 412 Score = 73.2 bits (178), Expect = 9e-12 Identities = 43/117 (36%), Positives = 63/117 (53%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F L++L DD R + + A+ + P SFCG A + I IPD L D R Sbjct: 41 LFGVKIVLISLVDDCRQWFK-AKVGLAASETPRNISFCGH--AIQRADIFEIPDTLADER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352 F +N +V G P +RFY G P+ + +G+ +GTLC D +PR+ A+ +L LA V Sbjct: 98 FWDNPLVTGKPYIRFYAGHPIRSGDGYPLGTLCLIDEQPRKLTATERELLQMLAHQV 154 [226][TOP] >UniRef100_Q2CFM6 Sensor protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CFM6_9RHOB Length = 404 Score = 73.2 bits (178), Expect = 9e-12 Identities = 47/125 (37%), Positives = 65/125 (52%), Gaps = 2/125 (1%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P A V++ + R + + G + + P SFC T+ S + MV+PD +D R Sbjct: 41 LFDCPIAHVSVVEQSRQWYKSVVG-IELSEMPKDNSFCTHTIMS--GEPMVVPDLSRDPR 97 Query: 182 FCNNEMV-RGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASR-CVVLNNLAELVV 355 F ++ MV GGP RFY G PL+ S+G R G+LC D P R L L E VV Sbjct: 98 FVDHPMVAEGGPQARFYAGVPLVLSSGFRFGSLCVLDFVPHAAPGEREMAALTALGEAVV 157 Query: 356 RHLEK 370 LEK Sbjct: 158 AALEK 162 [227][TOP] >UniRef100_B9ZM74 Sensor protein n=1 Tax=Thioalkalivibrio sp. K90mix RepID=B9ZM74_9GAMM Length = 697 Score = 73.2 bits (178), Expect = 9e-12 Identities = 46/148 (31%), Positives = 69/148 (46%) Frame = +2 Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184 F+ P A V L D++ +G G SFC + +R ++++V+ DA +DARF Sbjct: 41 FDVPMATVTLVDEKCQCFIAPQGPLGAGT-ERSISFCAHGL-TRPNELLVVEDARQDARF 98 Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364 +N +V G VRFY G PL G +G LC D +PR D L E+ L Sbjct: 99 SDNPLVLGETDVRFYAGIPLAPEAGLAVGNLCIIDTRPRRLDEQEVTALREFGEIATSLL 158 Query: 365 EKDIALQLRAHDNNSLAAAYGXLRRTLD 448 + +A + H ++L A L L+ Sbjct: 159 REYLARRDLGHSRSALDAQGQRLAAVLE 186 [228][TOP] >UniRef100_B9XKZ0 Putative GAF sensor protein n=1 Tax=bacterium Ellin514 RepID=B9XKZ0_9BACT Length = 218 Score = 73.2 bits (178), Expect = 9e-12 Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 3/151 (1%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I EAP AL+ L D+ R + + G SFC + ++ ++V+ DA KD R Sbjct: 40 ICEAPVALITLVDENRQWFKSKVG-IDLNQTSRDISFCAHAIL--HEDVLVVADASKDKR 96 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F N +V P +RFY G PLI +G +GTLC D KP + + L L+ V+ Sbjct: 97 FAKNPLVVSEPRIRFYAGAPLITPDGQALGTLCVLDKKPHKITPDQKRALEILSRHVMTQ 156 Query: 362 LE---KDIALQLRAHDNNSLAAAYGXLRRTL 445 LE + + L D++ + RR L Sbjct: 157 LELRRRSLELAKTRKDHDKVLKELEAARRKL 187 [229][TOP] >UniRef100_A1ZHX4 Serine/threonine protein kinases n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZHX4_9SPHI Length = 444 Score = 73.2 bits (178), Expect = 9e-12 Identities = 42/138 (30%), Positives = 69/138 (50%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I P +L++L + + + + G R + P +FC A ++ ++ DA KD R Sbjct: 41 ICSTPISLMSLVAENKQWFKAKVGLEAR-ETPRELAFCAH--AIHRPELFIVEDATKDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +V G P +RFY G PL +G +GTLC D +PR+ ++ L LA + Sbjct: 98 FHDNPLVTGHPDIRFYAGMPLTTPDGFSLGTLCVIDKRPRDLTEAQKTALKTLASQAIAQ 157 Query: 362 LEKDIALQLRAHDNNSLA 415 LE + L++ S+A Sbjct: 158 LELRMKLRVIESKQKSIA 175 [230][TOP] >UniRef100_A5CUL8 Putative uncharacterized protein n=1 Tax=Clavibacter michiganensis subsp. michiganensis NCPPB 382 RepID=A5CUL8_CLAM3 Length = 417 Score = 72.0 bits (175), Expect(2) = 9e-12 Identities = 44/121 (36%), Positives = 61/121 (50%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P A + L DD F + + A SFC +A R+ I+V+PDA +DAR Sbjct: 62 VFGVPVAEINLVDDAEQFTKSPQPAGVSLLSDRTQSFCD--VAIRSSDILVVPDATQDAR 119 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F V G +RFY G PL+ S G +GTLC D +PRE + +L+ + V R Sbjct: 120 FAERTTVTGPRHIRFYAGRPLL-SGGQTVGTLCLVDTEPRELAPDQEKLLDEMGAWVERE 178 Query: 362 L 364 L Sbjct: 179 L 179 Score = 21.2 bits (43), Expect(2) = 9e-12 Identities = 9/19 (47%), Positives = 10/19 (52%) Frame = +1 Query: 421 LWQXSPHAGLLRPLRRAGG 477 LW AG+ RP R GG Sbjct: 202 LWPDFDLAGISRPARGVGG 220 [231][TOP] >UniRef100_Q8YQQ8 Sensor protein n=1 Tax=Nostoc sp. PCC 7120 RepID=Q8YQQ8_ANASP Length = 1550 Score = 72.8 bits (177), Expect = 1e-11 Identities = 40/118 (33%), Positives = 58/118 (49%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P AL++L D R + + G +R + P +FC T+ + ++PDA D RF N Sbjct: 44 PIALISLIDQNRQWFKATFG-LERRETPRDEAFCAHTILE--SEAFIVPDATADERFATN 100 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 +V P +RFY G PL G+ +GTLC D PR + L L V++ LE Sbjct: 101 PLVISDPKIRFYAGVPLTNPEGYSLGTLCVIDYIPRNLSFEQIEALQILGRQVIKQLE 158 [232][TOP] >UniRef100_Q7V0A0 GAF domain n=1 Tax=Prochlorococcus marinus subsp. pastoris str. CCMP1986 RepID=Q7V0A0_PROMP Length = 250 Score = 72.8 bits (177), Expect = 1e-11 Identities = 41/118 (34%), Positives = 64/118 (54%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P +L+ L D + + + G + + WSFC T A + + ++I DA +D RF NN Sbjct: 47 PISLMTLVDKDKQWFKSKVG-LEINETKRDWSFC--THAIQENSPLIIQDAFQDERFINN 103 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 +V G P +RFY G PL +G+++GTLC D KP + V+ L++ +V LE Sbjct: 104 PLVTGDPKIRFYAGFPLKNRDGNKLGTLCVIDRKPGNLSLKQFNVMELLSKQIVAFLE 161 [233][TOP] >UniRef100_Q3BRB1 Putative sensor protein n=1 Tax=Xanthomonas campestris pv. vesicatoria str. 85-10 RepID=Q3BRB1_XANC5 Length = 375 Score = 72.8 bits (177), Expect = 1e-11 Identities = 45/124 (36%), Positives = 63/124 (50%) Frame = +2 Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187 E A V L D+ R + + A GA R + P SFC + R D+++++ D L D RF Sbjct: 62 ETQMAAVVLVDEDRQWFKSAHGA-PRSEAPRDISFCAHAIL-RPDEVLMVDDTLLDPRFH 119 Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 +N MV G GVRFY G PL+ S G +G+LC D P + L L+ + LE Sbjct: 120 DNPMVVGSGGVRFYAGAPLVTSQGLALGSLCVFDQTPAHLREDQREALQALSRQASQLLE 179 Query: 368 KDIA 379 +A Sbjct: 180 LRLA 183 [234][TOP] >UniRef100_B2FHL0 Putative GGDEF and GAF signalling protein n=1 Tax=Stenotrophomonas maltophilia K279a RepID=B2FHL0_STRMK Length = 356 Score = 72.8 bits (177), Expect = 1e-11 Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 1/127 (0%) Frame = +2 Query: 20 ALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEM 199 A V L D R + + +G + S CG + + QIMV+ DAL+D RF +N + Sbjct: 47 AAVTLIDVERQWFKSIQGIDAAENLRSE-SMCGHAILQPH-QIMVVEDALQDIRFHDNPV 104 Query: 200 VRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE-KDI 376 V G P +RFY G PLI+S+G +GTLC D +P+ + + L L+ V+ +E + Sbjct: 105 VTGDPHIRFYAGAPLISSDGLPLGTLCVFDAQPQHLPSDKAEALAALSRQVMLVMELRRF 164 Query: 377 ALQLRAH 397 AL ++ H Sbjct: 165 ALDIQKH 171 [235][TOP] >UniRef100_C4ZL18 Response regulator receiver modulated diguanylate cyclase/phosphodiesterase n=1 Tax=Thauera sp. MZ1T RepID=C4ZL18_THASP Length = 737 Score = 72.8 bits (177), Expect = 1e-11 Identities = 44/122 (36%), Positives = 60/122 (49%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 I EAP +++L D R + + G + SFC + D + + DA D R Sbjct: 157 IAEAPVGVISLVDTHRQWFKARVGVEVQTTSR-SVSFCAHALLG--DGLFEVEDATLDPR 213 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F +N +VRG PG+RFY G PL+ G +GTLC D +PR A+ L LA V Sbjct: 214 FADNPLVRGDPGIRFYAGMPLVMPGGEVVGTLCVIDSRPRRLGATAREALAVLARSVTDE 273 Query: 362 LE 367 LE Sbjct: 274 LE 275 [236][TOP] >UniRef100_A8TQ70 Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQ70_9PROT Length = 273 Score = 72.8 bits (177), Expect = 1e-11 Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 1/159 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P L++L D R + + A + P SFCG + + ++V+ DA KD R Sbjct: 41 LFRVPICLISLVDKDRQWFK-ARAGLDATETPRDISFCGHAILEHD--VLVVLDATKDER 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358 F +N +V GGP +RFY G P+ NG+ IGT+C + RE F L LA + V Sbjct: 98 FHDNPLVVGGPEIRFYAGAPISLPNGYNIGTVCIISPEVRETFTKDEARQLAGLAGVAV- 156 Query: 359 HLEKDIALQLRAHDNNSLAAAYGXLRRTLDCFDHCVALV 475 I+++ + + + L+R L+ D VAL+ Sbjct: 157 ---SAISVRALRREMDRERSEKERLQRALESVDQPVALL 192 [237][TOP] >UniRef100_A0ZB66 Sensor protein n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZB66_NODSP Length = 1508 Score = 72.8 bits (177), Expect = 1e-11 Identities = 38/118 (32%), Positives = 60/118 (50%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P ALV+L D R + + G + + P +FC + ++ + ++PD D RF +N Sbjct: 44 PIALVSLVDTNRQWFKSKVG-LEAPETPRDLAFCAHAILQKD--VFIVPDTTTDKRFADN 100 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 +V P +RFY G PL + G+ +GTLC D PR + + L L V++ LE Sbjct: 101 PLVTSDPNIRFYAGVPLTNAEGYSLGTLCVIDRVPRNLTSEQVEALRILGNQVIKQLE 158 [238][TOP] >UniRef100_A7TD30 Predicted protein (Fragment) n=1 Tax=Nematostella vectensis RepID=A7TD30_NEMVE Length = 138 Score = 72.8 bits (177), Expect = 1e-11 Identities = 37/96 (38%), Positives = 54/96 (56%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P ALV+L D R + + G + + P +FC + +R ++ ++PDA KD RF +N Sbjct: 45 PIALVSLIDSNRQWFKSRYG-LEATETPRDLAFCAHAI-NRPYELFIVPDATKDKRFHDN 102 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR 301 + G P V+FY G PL G+ +GTLC D KPR Sbjct: 103 PLTTGDPNVKFYAGVPLNTKEGYSLGTLCVIDTKPR 138 [239][TOP] >UniRef100_UPI0001693532 histidine kinase-response regulator hybrid protein n=1 Tax=Xanthomonas oryzae pv. oryzicola BLS256 RepID=UPI0001693532 Length = 860 Score = 72.4 bits (176), Expect = 1e-11 Identities = 46/119 (38%), Positives = 58/119 (48%) Frame = +2 Query: 11 APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190 AP ALV+L D R + + G + + P SFC + A ++M +PDA D RF N Sbjct: 48 APMALVSLLDANRQWFKARCGTDLK-ETPRSASFC--SHAIMGTELMEVPDAEADPRFVN 104 Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367 N +V PGVR Y G PLI G+ GTLC PR D + L LA LE Sbjct: 105 NPLVVAAPGVRSYVGVPLIGREGYAYGTLCTLSTTPRVLDEQQKQALIRLAHQAANQLE 163 [240][TOP] >UniRef100_C6XAD7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1 Tax=Methylovorus sp. SIP3-4 RepID=C6XAD7_METSD Length = 640 Score = 72.4 bits (176), Expect = 1e-11 Identities = 44/125 (35%), Positives = 64/125 (51%) Frame = +2 Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193 P AL++L D R + + G + + P +FC + MV+ DAL D RF +N Sbjct: 45 PIALISLVDTDRQWFKSRIGV-EAEESPRDVAFCAHAILQTKP--MVVNDALLDERFADN 101 Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373 MV P +RFY G P+ + G+ +GTLC D +PRE +L LA+LV + + Sbjct: 102 PMVLQFPNIRFYAGIPIRTTAGYALGTLCAIDAQPRELSKHEMEILTCLADLVSKEIRLR 161 Query: 374 IALQL 388 AL L Sbjct: 162 EALAL 166 [241][TOP] >UniRef100_B7KRQ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylobacterium chloromethanicum CM4 RepID=B7KRQ5_METC4 Length = 1423 Score = 72.4 bits (176), Expect = 1e-11 Identities = 43/121 (35%), Positives = 65/121 (53%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P A V+L + + G P SFC +T+ S +++V+ DA +D R Sbjct: 39 LFDVPIAYVSLVGETEQRFKGKCGLGAEAT-PREISFCTYTILSH--EVLVVEDATQDER 95 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F N +V G P +RFY G PL+ S+G +G+LC D R F A + L +LA++VV Sbjct: 96 FSANPLVIGKPHIRFYAGAPLVLSSGIHLGSLCLIDRVSRPFSAEQQERLRDLAQIVVVQ 155 Query: 362 L 364 L Sbjct: 156 L 156 [242][TOP] >UniRef100_B0UPP1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Methylobacterium sp. 4-46 RepID=B0UPP1_METS4 Length = 740 Score = 72.4 bits (176), Expect = 1e-11 Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 1/123 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P A V L + +++ G P SFC T+ S D++MV+PDA +D R Sbjct: 54 LFGTPWAAVTLIGEDTQWLKARHG-LDLPRTPRSVSFCTHTIES--DEVMVVPDASRDPR 110 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358 F +N +VRG +RFY G PL+ +G RIG +C D PR DA+ L +LA L++ Sbjct: 111 FRDNPLVRGDLALRFYAGAPLVTPSGARIGAICVLDHAPRPALDAAGRGRLADLARLMMT 170 Query: 359 HLE 367 L+ Sbjct: 171 QLD 173 [243][TOP] >UniRef100_A1WW32 Sensor protein n=1 Tax=Halorhodospira halophila SL1 RepID=A1WW32_HALHL Length = 437 Score = 72.4 bits (176), Expect = 1e-11 Identities = 41/122 (33%), Positives = 62/122 (50%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF+ P A ++L + R + + A G + P +FC + + + +V+ D D R Sbjct: 41 IFDVPIAFISLIERERQWFKAARGLGIE-ETPREIAFCNCVIQTGDP--LVVTDTHADPR 97 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 F ++ +V G P +RFY G PL+ G RIGTLC D + R + L LAE+VV Sbjct: 98 FADHPLVTGPPHLRFYAGVPLVVEGGARIGTLCLGDRQARTLSDAELATLQELAEVVVDE 157 Query: 362 LE 367 E Sbjct: 158 FE 159 [244][TOP] >UniRef100_Q0FTL1 Putative signal transduction histidine kinase with GAF domain n=1 Tax=Roseovarius sp. HTCC2601 RepID=Q0FTL1_9RHOB Length = 394 Score = 72.4 bits (176), Expect = 1e-11 Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 1/129 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 + + P AL++L D+ R + R G F+ + P S C + D I+ I D L DAR Sbjct: 41 MLDMPVALISLVDEDRQWFRARHG-FEPSETPLEQSICAHAILG--DDILEIEDTLDDAR 97 Query: 182 FCNNEMVRGGPG-VRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVR 358 +N + G +R+Y G PLI +GH IG+LC D KPR+ ++ +L ++ V+R Sbjct: 98 TADNPLCCGVLAEMRYYAGAPLITRSGHSIGSLCVLDTKPRKLTPAQRQLLMVMSRQVIR 157 Query: 359 HLEKDIALQ 385 L+ AL+ Sbjct: 158 QLDLQRALK 166 [245][TOP] >UniRef100_D0D1R8 Signal transduction histidine kinase n=1 Tax=Citreicella sp. SE45 RepID=D0D1R8_9RHOB Length = 390 Score = 72.4 bits (176), Expect = 1e-11 Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 1/129 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 + + P AL++L D+ R + R G F+ + P S C + A D I+ I D L D R Sbjct: 41 MLDMPVALISLVDENRQWFRARHG-FEPAETPLGQSIC--SHAILEDDILEIEDTLLDLR 97 Query: 182 FCNNEMVRGG-PGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVR 358 +N + G +RFY G PL+ GHRIG+LC D +PR+ A++ +L +A V+R Sbjct: 98 SADNPLCCGLLADMRFYAGAPLVTRTGHRIGSLCVLDRRPRKLTAAQRKLLTVMAGQVMR 157 Query: 359 HLEKDIALQ 385 L+ + L+ Sbjct: 158 QLDLERTLK 166 [246][TOP] >UniRef100_B4UYH5 Magnesium or manganese-dependent protein phosphatase n=1 Tax=Streptomyces sp. Mg1 RepID=B4UYH5_9ACTO Length = 441 Score = 72.4 bits (176), Expect = 1e-11 Identities = 48/148 (32%), Positives = 70/148 (47%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 IF+AP A VA+ D R++ + G + P A +DQ V+ DAL D R Sbjct: 49 IFDAPMATVAIVDSDRVWFKATHGLEGVREIPRDPGLTA--CAVPHDQPYVVTDALTDPR 106 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361 +V G PGVRFY P+I +G+R+G++ D +PR + L +LA LV+ Sbjct: 107 TAAGPLVHGWPGVRFYAAAPIITVDGYRLGSVNVLDTRPRRPTDVQIATLQDLAALVMDE 166 Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRRTL 445 LE ++ + A L RTL Sbjct: 167 LELRLSARRTVAAERERRADAERLARTL 194 [247][TOP] >UniRef100_A3SGP0 Sensor protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SGP0_9RHOB Length = 355 Score = 72.4 bits (176), Expect = 1e-11 Identities = 45/118 (38%), Positives = 70/118 (59%), Gaps = 2/118 (1%) Frame = +2 Query: 32 LFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEMV-RG 208 +++D +I + A G ++G+ P R S C +T+ S D+ M++ D D +F N+ MV G Sbjct: 1 MYEDSQI-LPSAVG-IEKGEVPRRISLCSFTIMS--DEPMIVSDLSLDPKFSNHPMVVEG 56 Query: 209 GPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVVRHLEKDIA 379 GP RFY G PL+ S+G R+G+LC DVKP + + R + +L L + VV E+ A Sbjct: 57 GPEYRFYVGVPLVLSSGFRLGSLCALDVKPHDKPSVRQIALLEELGKAVVAIFEQHSA 114 [248][TOP] >UniRef100_B7FUD4 Light histidine kinase n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FUD4_PHATR Length = 850 Score = 72.4 bits (176), Expect = 1e-11 Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 10/167 (5%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F+ P ALV+L D RI+ G + P + SFC + S N + ++PDA KD+R Sbjct: 108 MFDVPIALVSLVDLGRIWCISNRGLGEVRQIPRKDSFCAHAVLS-NSKSFIVPDASKDSR 166 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLN-------NL 340 F N +V G G+RFY G PL +RIG C KPR S ++ + Sbjct: 167 FSTNPLVTEG-GIRFYGGAPLETPENYRIGNFCLLGTKPRPEGLSEAELMTLVDFAAMAV 225 Query: 341 AELVVRHLEKDIALQ---LRAHDNNSLAAAYGXLRRTLDCFDHCVAL 472 LV R +D ++ + AH + L L+ +L+ + V+L Sbjct: 226 KVLVDRRYRRDTEIKQDLIVAHTAHDLITPLTGLQMSLNLLNEDVSL 272 [249][TOP] >UniRef100_Q4P540 Putative uncharacterized protein n=1 Tax=Ustilago maydis RepID=Q4P540_USTMA Length = 2065 Score = 72.4 bits (176), Expect = 1e-11 Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 1/88 (1%) Frame = +2 Query: 107 SFCGWTMASRNDQIMVIPDALKDARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFA 286 SFC + +D+ +VI DA KD RF N +V+G P +RFY G+PL S+G IG+LC Sbjct: 860 SFCSHAILQDSDEPIVILDAAKDWRFSGNPLVQGSPDIRFYAGSPLRTSDGLNIGSLCLI 919 Query: 287 DVKPR-EFDASRCVVLNNLAELVVRHLE 367 D KPR +F + L + +V+R +E Sbjct: 920 DDKPRTDFGPRQRHTLREFSRVVMREME 947 [250][TOP] >UniRef100_C1D3W6 Putative response regulator n=1 Tax=Deinococcus deserti VCD115 RepID=C1D3W6_DEIDV Length = 592 Score = 72.0 bits (175), Expect = 2e-11 Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 1/158 (0%) Frame = +2 Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181 +F P A++ L D+++I+ + G K G + C T+ S Q+MV+PDA ++ R Sbjct: 40 LFSVPYAMINLIDEQQIWAKACFGT-KTGSLTREHAPCVRTIEST--QVMVVPDARQNHR 96 Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358 F ++ V G+RFY G PL+ +G+ IGTLC D +PR L +LA LV+ Sbjct: 97 FASHG-VMAEHGLRFYAGAPLVTHDGYSIGTLCLLDEQPRTGLSDEESSTLQDLAALVMD 155 Query: 359 HLEKDIALQLRAHDNNSLAAAYGXLRRTLDCFDHCVAL 472 LE +A A D + + + D H A+ Sbjct: 156 ELELRLAQLTLARDAKAKSQMLTRMTGAADHAQHLAAV 193