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[1][TOP]
>UniRef100_A8IGG5 Mixed lineage protein kinase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IGG5_CHLRE
Length = 785
Score = 333 bits (853), Expect = 5e-90
Identities = 159/160 (99%), Positives = 159/160 (99%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR
Sbjct: 40 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 99
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH
Sbjct: 100 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 159
Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRRTLDCFDHCVALVDT 481
LEKDIALQLRAHDNNSLAAAYG LRRTLDCFDHCVALVDT
Sbjct: 160 LEKDIALQLRAHDNNSLAAAYGNLRRTLDCFDHCVALVDT 199
[2][TOP]
>UniRef100_A8I2K3 FhlA domain-contained protein kinase (Fragment) n=1
Tax=Chlamydomonas reinhardtii RepID=A8I2K3_CHLRE
Length = 951
Score = 110 bits (276), Expect = 4e-23
Identities = 63/164 (38%), Positives = 90/164 (54%), Gaps = 4/164 (2%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFK-RGDFPWRWSFCGWTMASRND--QIMVIPDALK 172
+F+ P ALVA + IFIR A K D WR+S W M + +D ++++PDA
Sbjct: 413 VFQLPVALVAAYRSANIFIRST--ALKLTDDDQWRYSLAQWAMLNVHDLRDVLLVPDATL 470
Query: 173 DARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
D RF V P VRF+C +PL +S G +GTLC AD + R + + +V+NNL LV
Sbjct: 471 DDRFRTQYCVANEPRVRFFCASPLRSSTGELLGTLCMADFQERMLEPANLLVVNNLQSLV 530
Query: 353 VRHLEKDIALQLRAHDNN-SLAAAYGXLRRTLDCFDHCVALVDT 481
+R LE+D+AL +N + + R LD F+ C+ VDT
Sbjct: 531 IRQLERDMALAAERLENEVATEQLQQEMMRALDHFEKCIMFVDT 574
[3][TOP]
>UniRef100_A8IR08 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IR08_CHLRE
Length = 147
Score = 105 bits (262), Expect = 2e-21
Identities = 50/114 (43%), Positives = 74/114 (64%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P ALV+L D R + + +G R + SFC WT+ + +++V+ +AL+D R
Sbjct: 35 VFKCPIALVSLVDKDRQWFKSVQGLPVR-QTDRKSSFCAWTLLPEHPEVLVVENALEDIR 93
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLA 343
F NN +V G P +RFY G PL+A+NG R+G+LC D KPR+FDA C +L N+A
Sbjct: 94 FRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQFDAESCNMLANMA 147
[4][TOP]
>UniRef100_A3YZB7 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 5701
RepID=A3YZB7_9SYNE
Length = 337
Score = 103 bits (258), Expect = 5e-21
Identities = 54/122 (44%), Positives = 76/122 (62%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF+ P AL++L D R + EG + + P +FC T+A+ D++MV+PDAL+D R
Sbjct: 50 IFDMPIALISLVDHDRQWFLSREG-LEVSETPREVAFCAHTIAT--DEVMVVPDALQDER 106
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V PG+RFY G PL +GH +GTLC D KPREF + L LA+LV+R
Sbjct: 107 FSSNPLVLSPPGIRFYAGAPLRTKDGHNLGTLCVIDQKPREFSPEQKQQLRMLADLVMRE 166
Query: 362 LE 367
+E
Sbjct: 167 IE 168
[5][TOP]
>UniRef100_A4VFL1 Sensor protein n=1 Tax=Pseudomonas stutzeri A1501
RepID=A4VFL1_PSEU5
Length = 793
Score = 95.9 bits (237), Expect = 1e-18
Identities = 54/137 (39%), Positives = 78/137 (56%)
Frame = +2
Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
+ P AL++L DDRR + + G + P SFC +T+ +QI +PDAL+D RF
Sbjct: 42 DTPIALISLVDDRRQWFKSRVG-LDVSETPRDISFCTYTITG--EQIFEVPDALQDPRFR 98
Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+N +V+G P +RFY GTPL + +GH +GTLC D KPR + + +L L V+R E
Sbjct: 99 DNPLVQGDPHIRFYAGTPLTSPDGHNLGTLCVIDRKPRRLSSEQREILERLGRQVIRLFE 158
Query: 368 KDIALQLRAHDNNSLAA 418
+ L AH + AA
Sbjct: 159 Q----HLLAHRHAEQAA 171
[6][TOP]
>UniRef100_B5IIP1 GAF sensor diguanylate cyclase n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IIP1_9CHRO
Length = 364
Score = 95.9 bits (237), Expect = 1e-18
Identities = 50/122 (40%), Positives = 72/122 (59%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+ E P AL++L D R + G + P +FC T+ + +V+PDA D R
Sbjct: 42 VLETPIALISLIDKNRQWFLARHG-LDITETPREQAFCAHTITE--GEPLVVPDARTDPR 98
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
FC+N +V G PGVRFY G PL + +GH +G+LC D +PR A++ +L +LA+LVVR
Sbjct: 99 FCSNPLVLGEPGVRFYAGAPLASPDGHNLGSLCVIDRQPRRLSAAQVKLLQDLADLVVRE 158
Query: 362 LE 367
LE
Sbjct: 159 LE 160
[7][TOP]
>UniRef100_B8KKX5 Diguanylate cyclase (Ggdef domain) n=1 Tax=gamma proteobacterium
NOR5-3 RepID=B8KKX5_9GAMM
Length = 334
Score = 95.1 bits (235), Expect = 2e-18
Identities = 54/134 (40%), Positives = 82/134 (61%), Gaps = 1/134 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P +LV+L D R + + A+G + P SFCG +A D+++ +P+AL D R
Sbjct: 41 MFGVPISLVSLVDSERQWFKSAQG-LDATETPRDISFCGHAIAG--DELLYVPNALDDKR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PL+A+NGH++GTLC D +PRE D ++L +LA +V
Sbjct: 98 FHDNPLVTAEPHIRFYAGNPLMAANGHKVGTLCLIDSEPRELDDEDKLLLEDLAVMV--- 154
Query: 362 LEKDIA-LQLRAHD 400
E++IA LQ+ D
Sbjct: 155 -EQEIASLQMATLD 167
[8][TOP]
>UniRef100_Q4ZNM1 EAL:GAF n=1 Tax=Pseudomonas syringae pv. syringae B728a
RepID=Q4ZNM1_PSEU2
Length = 607
Score = 92.0 bits (227), Expect = 2e-17
Identities = 51/121 (42%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
FEAP AL+++ D+ R F R G K + P SFC +T+ S D + IPDA DARF
Sbjct: 43 FEAPIALISIVDEHRQFFRARVG-LKARETPRNVSFCAYTILS--DTLFEIPDATLDARF 99
Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRH 361
NN +V G P +R+Y G PLI +G +G+LC D KPRE + +L A LV++
Sbjct: 100 VNNGLVTGHPDIRYYAGAPLITDDGIALGSLCVIDTKPREPMSEYQTQMLKRFASLVMKR 159
Query: 362 L 364
+
Sbjct: 160 I 160
[9][TOP]
>UniRef100_A4WR53 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides
ATCC 17025 RepID=A4WR53_RHOS5
Length = 334
Score = 92.0 bits (227), Expect = 2e-17
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 5/154 (3%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I+ P A + L DD+R++++ GA + D P +FC T+ R+++++ I D L D R
Sbjct: 38 IYAVPMAAMTLIDDQRLWLKSHSGATEV-DIPRCHAFCDQTI--RDNKVVQIVDTLSDPR 94
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N V G P VR Y G PL +GH IGT+C AD PR++ A VL +LA L V
Sbjct: 95 FRDNPYVVGAPHVRSYLGAPLTTPDGHNIGTICIADTIPRDYTAVDREVLADLARLAVIQ 154
Query: 362 LEKDIALQLRAHDNNSLAAA-----YGXLRRTLD 448
LE L+L+A ++ AA LRR +D
Sbjct: 155 LE----LRLQATEDQQTTAATRRAFLSVLRRAMD 184
[10][TOP]
>UniRef100_B2JFQ6 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia phymatum
STM815 RepID=B2JFQ6_BURP8
Length = 319
Score = 91.3 bits (225), Expect = 3e-17
Identities = 52/133 (39%), Positives = 72/133 (54%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P A V L D R + + G + + P SFCG +A +D + ++ DA D R
Sbjct: 41 LFGVPIAAVTLVDSHRQWFKSHPG-LEASETPRDVSFCGHAIA--DDDLFLVNDASLDVR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +RFY G PL SNG R+GTLC DVKPR D V+L +LA + +
Sbjct: 98 FADNPLVTGDPNIRFYAGYPLTVSNGSRLGTLCLIDVKPRALDDEERVLLRDLARMAEQE 157
Query: 362 LEKDIALQLRAHD 400
+ A+QL D
Sbjct: 158 I---AAVQLATTD 167
[11][TOP]
>UniRef100_C6NKW0 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(S) n=1 Tax=Pectobacterium wasabiae WPP163
RepID=C6NKW0_9ENTR
Length = 722
Score = 90.9 bits (224), Expect = 4e-17
Identities = 58/124 (46%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
Frame = +2
Query: 2 IFEAPAALVALFD-DRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDA 178
IF AP LV+L + +R++F F + P SFC T+ + +IMV+PDALKD
Sbjct: 41 IFNAPIVLVSLVEAERQLFAASVGVPFC--ETPRDISFCAHTILKK--KIMVVPDALKDV 96
Query: 179 RFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVV 355
RF NN +V G P +RFY G PLI S+GH IGTLC D+KPR R L +LA LV+
Sbjct: 97 RFKNNPLVVGIPYIRFYAGIPLITSSGHAIGTLCIIDLKPRAAFTKRDEHNLQDLASLVM 156
Query: 356 RHLE 367
LE
Sbjct: 157 DKLE 160
[12][TOP]
>UniRef100_Q0G2R6 Putative signal transduction histidine kinase with GAF domain n=1
Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G2R6_9RHIZ
Length = 694
Score = 90.5 bits (223), Expect = 5e-17
Identities = 57/151 (37%), Positives = 82/151 (54%), Gaps = 2/151 (1%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P ALV+L D R + + A F+ + P S C ++SR+ ++VIPD KD R
Sbjct: 64 LFDVPVALVSLVDRHRQWFK-ARSGFELSETPIAQSVCAHALSSRD--VLVIPDLTKDLR 120
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADV--KPREFDASRCVVLNNLAELVV 355
+N +V G P +RFY G PL+ +GH +GTLC DV +P+ F ++ L LA+ VV
Sbjct: 121 TASNTLVTGEPKIRFYAGAPLVTPDGHVLGTLCIIDVVSRPQGFSVNQAEDLKKLADQVV 180
Query: 356 RHLEKDIALQLRAHDNNSLAAAYGXLRRTLD 448
LE +A+ R DN AA R D
Sbjct: 181 ALLEMRLAVGQR--DNLLRQAAEARTRAEED 209
[13][TOP]
>UniRef100_Q4KBH0 Diguanylate cyclase, putative n=1 Tax=Pseudomonas fluorescens Pf-5
RepID=Q4KBH0_PSEF5
Length = 322
Score = 90.1 bits (222), Expect = 7e-17
Identities = 52/137 (37%), Positives = 76/137 (55%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P ALV+L D R + + G + SFCG + DQI+ +PDA D R
Sbjct: 41 LFNVPIALVSLVDADRQWFKSCVG-LDVSETSRDISFCGHAILG--DQILTVPDAGLDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G PG+RFY G PL +NG ++GTLC D+KPR+ D +L +LA + +
Sbjct: 98 FHDNPLVVGAPGIRFYAGCPLTVTNGSKLGTLCLIDIKPRDLDDEDRALLRDLARMAEQE 157
Query: 362 LEKDIALQLRAHDNNSL 412
L A+Q+ + D +L
Sbjct: 158 L---AAVQMASMDELTL 171
[14][TOP]
>UniRef100_C5AGJ9 Diguanylate cyclase n=1 Tax=Burkholderia glumae BGR1
RepID=C5AGJ9_BURGB
Length = 324
Score = 90.1 bits (222), Expect = 7e-17
Identities = 55/134 (41%), Positives = 72/134 (53%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF+ P ALV+L D R + + G R + SFC + S D +VIPDA D R
Sbjct: 41 IFDVPIALVSLIDANRQWFKSCFGLEAR-ETSRDVSFCAHAILS--DDTLVIPDATLDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F N +V G PG+RFY G PL +G +GTLC D +PRE DA+ L +LA L R
Sbjct: 98 FAGNPLVTGAPGIRFYAGHPLALPDGTNLGTLCLIDTRPREIDATDLSHLRDLANLAERE 157
Query: 362 LEKDIALQLRAHDN 403
+ A+QL D+
Sbjct: 158 V---AAVQLATLDS 168
[15][TOP]
>UniRef100_Q6D4F7 Putative signaling protein n=1 Tax=Pectobacterium atrosepticum
RepID=Q6D4F7_ERWCT
Length = 722
Score = 89.7 bits (221), Expect = 9e-17
Identities = 57/124 (45%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
Frame = +2
Query: 2 IFEAPAALVALFD-DRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDA 178
IF AP LV+L + +R++F F + P SFC T+ + +IMV+PDALKDA
Sbjct: 41 IFSAPIVLVSLVEAERQLFAASVGVPFC--ETPRDISFCAHTILKK--KIMVVPDALKDA 96
Query: 179 RFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVV 355
RF NN +V G P +RFY G PLI +GH IGTLC D+KPR R + +LA LV+
Sbjct: 97 RFKNNPLVVGIPYIRFYAGIPLITPSGHAIGTLCIIDLKPRTTFTKRDEHNMQDLASLVM 156
Query: 356 RHLE 367
LE
Sbjct: 157 DKLE 160
[16][TOP]
>UniRef100_C9P933 Signal transduction histidine kinase n=1 Tax=Vibrio metschnikovii
CIP 69.14 RepID=C9P933_VIBME
Length = 642
Score = 89.7 bits (221), Expect = 9e-17
Identities = 48/117 (41%), Positives = 69/117 (58%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF P AL++L D R + + +G + P SFCG + N +I VI +AL D R
Sbjct: 41 IFSVPIALISLVDRDRQWFKSRQGLDAQ-QTPREISFCGHAIL--NSEIFVIENALVDQR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
FC+N +V G P +RFY G PL ++ G+RIGTLC D +P+ F + + +L +LA V
Sbjct: 98 FCDNPLVMGAPDIRFYAGAPLHSTKGYRIGTLCLIDSQPQSFSSKQRSMLKDLAATV 154
[17][TOP]
>UniRef100_A2VQK9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Burkholderia cenocepacia
PC184 RepID=A2VQK9_9BURK
Length = 335
Score = 89.7 bits (221), Expect = 9e-17
Identities = 49/121 (40%), Positives = 67/121 (55%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P ALV+L D+ R + + G P SFC + S + MVI DAL D R
Sbjct: 53 LFDVPIALVSLVDENRQWFKSHAG-LDATQTPRDVSFCAHALLSGDT--MVIQDALNDDR 109
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G PG+RFY G PL A NG +GTLC D +PR +A +L +LA + R
Sbjct: 110 FHDNPLVTGTPGIRFYAGRPLTAPNGAPVGTLCLIDTRPRSLEADELALLGDLAHMTERE 169
Query: 362 L 364
+
Sbjct: 170 I 170
[18][TOP]
>UniRef100_B9KK71 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides
KD131 RepID=B9KK71_RHOSK
Length = 336
Score = 89.4 bits (220), Expect = 1e-16
Identities = 52/140 (37%), Positives = 83/140 (59%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I+ P A+++L D R++++ +G +R + P +FC +A R +++ I DA D R
Sbjct: 38 IYAVPLAVMSLIDGDRLWVKSVQGGERR-EVPRCDTFCD--VAIRGKKVLQIVDAQSDPR 94
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
+ +N VRG PG+R Y G PL +G+ IGTLC D PR++ + VL NLA+L V H
Sbjct: 95 YRDNPYVRGEPGMRSYLGAPLTTPDGYNIGTLCVIDTIPRDYTSVDREVLANLAKLAVIH 154
Query: 362 LEKDIALQLRAHDNNSLAAA 421
LE L+L+A ++ +A+
Sbjct: 155 LE----LRLQATEDQQTSAS 170
[19][TOP]
>UniRef100_A3PL62 Diguanylate cyclase with GAF sensor n=2 Tax=Rhodobacter sphaeroides
RepID=A3PL62_RHOS1
Length = 336
Score = 89.4 bits (220), Expect = 1e-16
Identities = 52/140 (37%), Positives = 83/140 (59%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I+ P A+++L D R++++ +G +R + P +FC +A R +++ I DA D R
Sbjct: 38 IYAVPLAVMSLIDGDRLWVKSVQGGERR-EVPRCDTFCD--VAIRGKKVLQIVDAQSDPR 94
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
+ +N VRG PG+R Y G PL +G+ IGTLC D PR++ + VL NLA+L V H
Sbjct: 95 YRDNPYVRGEPGMRSYLGAPLTTPDGYNIGTLCVIDTIPRDYTSVDREVLANLAKLAVIH 154
Query: 362 LEKDIALQLRAHDNNSLAAA 421
LE L+L+A ++ +A+
Sbjct: 155 LE----LRLQATEDQQTSAS 170
[20][TOP]
>UniRef100_A1S6Z8 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella amazonensis
SB2B RepID=A1S6Z8_SHEAM
Length = 327
Score = 89.4 bits (220), Expect = 1e-16
Identities = 50/122 (40%), Positives = 68/122 (55%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P L++L D R + + G + + SFCG + + I VI DAL+D R
Sbjct: 41 LFDVPICLISLVDSDRQWFKSCIG-LSQSETRRDISFCGHAIMQAD--IFVIEDALEDLR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +RFY G PL SNGHR+GTLC D K R F+ L +L +LVV
Sbjct: 98 FADNPLVTGEPHIRFYAGYPLTLSNGHRVGTLCIIDRKARRFEPEDYCDLEDLGKLVVSE 157
Query: 362 LE 367
LE
Sbjct: 158 LE 159
[21][TOP]
>UniRef100_B2UI26 Diguanylate cyclase with GAF sensor n=2 Tax=Ralstonia pickettii
RepID=B2UI26_RALPJ
Length = 348
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/117 (41%), Positives = 69/117 (58%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+AP LV+L D +R + + G R + SFCG +A DQ++VIPD D R
Sbjct: 41 VFDAPIVLVSLIDAQRQWFKSCIGLNVR-ETGRDISFCGHAVAE--DQMLVIPDTKADPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
F +N +V G P +RFY G P+ +G+ +GTLC D KPR FD + +LN+LA V
Sbjct: 98 FADNPLVTGAPHIRFYAGRPVRNLSGYAVGTLCVLDKKPRSFDQAERELLNDLASWV 154
[22][TOP]
>UniRef100_B0RTT3 Signaling protein n=3 Tax=Xanthomonas campestris pv. campestris
RepID=B0RTT3_XANCB
Length = 618
Score = 89.0 bits (219), Expect = 2e-16
Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Frame = +2
Query: 20 ALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEM 199
ALV+L D+ R + + G + + P + +FC + R+D ++VIPDAL D RFCNN +
Sbjct: 55 ALVSLVDEHRQWFKARVG-LEAPETPRKHAFCAHAL--RSDDVLVIPDALLDPRFCNNPL 111
Query: 200 VRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRHLE 367
V G P +RFY G PL +GH IGTLC PR DA + + L L +L V +E
Sbjct: 112 VLGAPHIRFYAGAPLKLRDGHTIGTLCVIGTSPRAGLDAEQRIQLEGLRDLAVLRVE 168
[23][TOP]
>UniRef100_UPI00016938B6 putative signal transduction protein n=1 Tax=Xanthomonas oryzae pv.
oryzicola BLS256 RepID=UPI00016938B6
Length = 582
Score = 88.6 bits (218), Expect = 2e-16
Identities = 44/119 (36%), Positives = 69/119 (57%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P ALV+L D+RR + + G + P +FC A + D +M +PDA D RFC+N
Sbjct: 49 PIALVSLVDERRQWCKANIGLPGVSETPRELAFCAH--AIQGDAVMEVPDAPADPRFCDN 106
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEK 370
+V PG+R+Y G P++ S+G R+GT+C D +PR + ++ L LA++ LE+
Sbjct: 107 ALVTDAPGIRYYAGAPIVLSDGVRVGTVCVIDQRPRALEPAQLQALQQLAKVAAEGLEQ 165
[24][TOP]
>UniRef100_Q3KE87 Putative GGDEF/GAF domain sensory box protein n=1 Tax=Pseudomonas
fluorescens Pf0-1 RepID=Q3KE87_PSEPF
Length = 321
Score = 88.6 bits (218), Expect = 2e-16
Identities = 49/137 (35%), Positives = 76/137 (55%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P ALV L D R + + G + P SFC + D++M++PDA +D R
Sbjct: 41 LFNVPIALVTLVDKERQWFKSCVG-LDTTETPRSVSFCAHAIL--RDELMLVPDAREDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +RFY G PL +G+++GTLC D KPR+ D +L +LA + +
Sbjct: 98 FHDNPLVTGEPNIRFYAGYPLTVPSGNKMGTLCLIDTKPRDLDEEERALLRDLAGMAEQE 157
Query: 362 LEKDIALQLRAHDNNSL 412
L +A+Q+ + D +L
Sbjct: 158 L---MAVQMASMDELTL 171
[25][TOP]
>UniRef100_B4E8Q7 Putative cyclic-di-GMP signaling protein n=1 Tax=Burkholderia
cenocepacia J2315 RepID=B4E8Q7_BURCJ
Length = 323
Score = 88.2 bits (217), Expect = 3e-16
Identities = 48/121 (39%), Positives = 66/121 (54%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P ALV+L D+ R + + G P SFC + + + MVI DAL D R
Sbjct: 41 LFDVPIALVSLVDENRQWFKSRAG-LDATQTPRDVSFCAHALLAGDT--MVIQDALNDDR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G PG+RFY G PL A NG IGTLC D +PR + +L +LA + R
Sbjct: 98 FHDNPLVTGAPGIRFYAGRPLTAPNGAPIGTLCLIDTRPRSLEPDELALLGDLAHMTERE 157
Query: 362 L 364
+
Sbjct: 158 I 158
[26][TOP]
>UniRef100_A7MPS7 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC
BAA-894 RepID=A7MPS7_ENTS8
Length = 323
Score = 88.2 bits (217), Expect = 3e-16
Identities = 46/117 (39%), Positives = 68/117 (58%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F AP AL++L D +++ +GA + P R SFCG T+ S ++I DAL D R
Sbjct: 41 LFNAPVALISLVDQEQLWFVSCDGAEPK-PIPRRVSFCGHTILSNAP--LIITDALSDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
FC+N +V G P +RFY G P+ +G G+LC D +PR F + +L +LA +V
Sbjct: 98 FCDNPLVNGPPHIRFYAGCPVRLPDGATAGSLCIIDTEPRAFSEADAHLLRDLAAIV 154
[27][TOP]
>UniRef100_C5V279 Diguanylate cyclase with PAS/PAC and GAF sensors n=1
Tax=Gallionella ferruginea ES-2 RepID=C5V279_9PROT
Length = 462
Score = 88.2 bits (217), Expect = 3e-16
Identities = 43/122 (35%), Positives = 71/122 (58%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I P A ++L D+ R + + G + + P +FC T+ + + M++P+ L+D R
Sbjct: 41 ICHTPFAAISLIDEHRQWFKAIVGV-EVSETPRDVAFCAHTILQQ--ETMIVPNTLEDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
FC+N V GG +RFY G PL+ +G+R+GTLC D +PR+ A + + LA+ V+ H
Sbjct: 98 FCDNPFVEGGLNLRFYAGVPLVTESGYRLGTLCVFDQQPRQLSAEQLDAIKTLADSVMAH 157
Query: 362 LE 367
L+
Sbjct: 158 LD 159
[28][TOP]
>UniRef100_A6F4L6 Sensor protein n=1 Tax=Marinobacter algicola DG893
RepID=A6F4L6_9ALTE
Length = 815
Score = 88.2 bits (217), Expect = 3e-16
Identities = 46/116 (39%), Positives = 69/116 (59%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
F P ALV+L DD+R + + +G R + P SFCG + S D++ ++ D +D+RF
Sbjct: 42 FGVPIALVSLVDDKRQWFKSCQGLEAR-ETPRDISFCGHAILS--DRLFIVEDTHEDSRF 98
Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
+N +V G P +RFY G L + +G+R+GTLC D +PR D + V+L LA V
Sbjct: 99 ADNPLVTGPPHIRFYAGAQLHSHDGYRLGTLCIIDTRPRTLDHDQRVLLEELARCV 154
[29][TOP]
>UniRef100_UPI000182674C hypothetical protein ENTCAN_02317 n=1 Tax=Enterobacter cancerogenus
ATCC 35316 RepID=UPI000182674C
Length = 321
Score = 87.8 bits (216), Expect = 3e-16
Identities = 48/116 (41%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDF-PWRWSFCGWTMASRNDQIMVIPDALKDAR 181
F+ P A+V L D+ + ++ A+G K D P SFCG T+ ++ +V+ D L+D R
Sbjct: 42 FQVPLAMVNLIDEHSLIVKSADG--KAPDVVPRHISFCGHTILG--EKPLVVGDMLQDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAEL 349
F +N +V G P VRFY G PL NG +G+LC D PREF+A+ VL++L+ L
Sbjct: 98 FADNPLVAGEPNVRFYAGFPLRLRNGASVGSLCLIDYAPREFNAADLAVLSDLSAL 153
[30][TOP]
>UniRef100_A4WAF7 Diguanylate cyclase with GAF sensor n=1 Tax=Enterobacter sp. 638
RepID=A4WAF7_ENT38
Length = 321
Score = 87.8 bits (216), Expect = 3e-16
Identities = 50/116 (43%), Positives = 62/116 (53%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P A V L D+R EGA G P SFC T+ ++ +V+ D +D R
Sbjct: 41 LFNVPVATVNLIDERSQVAMSTEGAMAAG-LPRNVSFCAHTIL--DNATLVVSDTHRDDR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAEL 349
F +N +V G PGVRFY G PL NG +GTLC D PRE AS LN+LA L
Sbjct: 98 FRDNPLVTGTPGVRFYAGVPLSLPNGTLVGTLCLLDYVPRELSASDMAALNDLAAL 153
[31][TOP]
>UniRef100_Q87WK3 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas
syringae pv. tomato RepID=Q87WK3_PSESM
Length = 607
Score = 86.7 bits (213), Expect = 8e-16
Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
F+ P ALV++ D+ R + R G R + P SFC +T+ S D + IPDA D RF
Sbjct: 43 FQTPIALVSIVDEHRQWFRARVGLSAR-ETPRNVSFCAYTILS--DTLFEIPDATLDERF 99
Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRH 361
NN +V G P +R+Y G PLI +G +G+LC D KPRE + +L A LV++
Sbjct: 100 MNNSLVTGHPDIRYYAGAPLITDDGLALGSLCVIDTKPREPMSEHQTQMLKRFASLVMKR 159
Query: 362 L 364
+
Sbjct: 160 I 160
[32][TOP]
>UniRef100_Q167N3 Sensory box/GGDEF family protein, putative n=1 Tax=Roseobacter
denitrificans OCh 114 RepID=Q167N3_ROSDO
Length = 785
Score = 86.7 bits (213), Expect = 8e-16
Identities = 53/123 (43%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P LV+L D R + + A+ + + SFC T A R + +MVIPDA KDAR
Sbjct: 90 VFSVPIVLVSLIDLNRQWFK-AKVGLELCETNLDVSFC--TYAVRQNDVMVIPDATKDAR 146
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358
F NNE+VRG G+RFY G PL ++G +GTLC D P +F + +L LA LVV
Sbjct: 147 FANNELVRGPDGIRFYAGAPLRTADGFVVGTLCLVDGVPHLDFGSEDRALLAKLAVLVVD 206
Query: 359 HLE 367
+E
Sbjct: 207 LME 209
[33][TOP]
>UniRef100_C6DFX5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(S) n=1 Tax=Pectobacterium carotovorum subsp.
carotovorum PC1 RepID=C6DFX5_PECCP
Length = 722
Score = 86.7 bits (213), Expect = 8e-16
Identities = 56/124 (45%), Positives = 71/124 (57%), Gaps = 2/124 (1%)
Frame = +2
Query: 2 IFEAPAALVALFD-DRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDA 178
IF P LV+L + +R++F F SFC T+ + +IMV+PDALKDA
Sbjct: 41 IFNVPIVLVSLVEAERQLFAASVGVPFCETSRDI--SFCAHTILKK--KIMVVPDALKDA 96
Query: 179 RFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVV 355
RF NN +V G P +RFY G PLI +GH IGTLC D+KPR R L +LA LV+
Sbjct: 97 RFRNNPLVVGVPYIRFYAGIPLITPSGHAIGTLCIIDLKPRSTFTKRDEHNLQDLASLVM 156
Query: 356 RHLE 367
LE
Sbjct: 157 DKLE 160
[34][TOP]
>UniRef100_A1SVH2 Diguanylate cyclase with GAF sensor n=1 Tax=Psychromonas ingrahamii
37 RepID=A1SVH2_PSYIN
Length = 316
Score = 86.7 bits (213), Expect = 8e-16
Identities = 54/155 (34%), Positives = 78/155 (50%), Gaps = 1/155 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P ALV+L D+ R + + G + P SFCG + ++I +IPD +KD R
Sbjct: 41 MFDVPIALVSLVDENRQWFKSCTG-INVSEIPRDISFCGHAILE--NEIFIIPDTIKDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PL +G +GTLC D +PR D L +LAEL
Sbjct: 98 FSDNPLVLNEPYIRFYAGCPLRYLDGSTLGTLCIIDTQPRVLDEEDLDALKDLAELAEHE 157
Query: 362 LEKDIALQLRAHDN-NSLAAAYGXLRRTLDCFDHC 463
L +A+QL D L+ G ++ D C
Sbjct: 158 L---MAVQLATQDELTKLSNRRGFIKLAQHGLDIC 189
[35][TOP]
>UniRef100_Q0EE59 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas
syringae pv. actinidiae RepID=Q0EE59_PSESF
Length = 607
Score = 86.7 bits (213), Expect = 8e-16
Identities = 48/121 (39%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
F+ P ALV++ D+ R + R G R + P SFC +T+ S D + IPDA D RF
Sbjct: 43 FQTPIALVSIVDEHRQWFRARVGLSAR-ETPRNVSFCAYTILS--DTLFEIPDATLDERF 99
Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRH 361
NN +V G P +R+Y G PLI +G +G+LC D KPRE + +L A LV++
Sbjct: 100 MNNSLVTGHPDIRYYAGAPLITDDGLALGSLCVIDTKPREPMSEHQTQMLKRFASLVMKR 159
Query: 362 L 364
+
Sbjct: 160 I 160
[36][TOP]
>UniRef100_B1G7L8 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia graminis
C4D1M RepID=B1G7L8_9BURK
Length = 326
Score = 86.7 bits (213), Expect = 8e-16
Identities = 52/137 (37%), Positives = 72/137 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P ALV+L D R + + G + SFC + +D I+ +PD L D R
Sbjct: 41 LFGVPIALVSLVDANRQWFKSCVG-LTASETSRDVSFCAHAIL--DDDILAVPDTLADER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PL NG R+GTLC DVKPRE D +L +LA + +
Sbjct: 98 FHDNPLVTEAPNIRFYAGCPLTVPNGSRLGTLCLIDVKPRELDDEERELLRDLARMAEQE 157
Query: 362 LEKDIALQLRAHDNNSL 412
L A+QL D+ +L
Sbjct: 158 L---AAVQLATLDDLTL 171
[37][TOP]
>UniRef100_Q39GU9 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia sp. 383
RepID=Q39GU9_BURS3
Length = 323
Score = 86.3 bits (212), Expect = 1e-15
Identities = 49/121 (40%), Positives = 64/121 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P ALV+L DD R + + G SFC + N MVI DAL D R
Sbjct: 41 LFDVPIALVSLVDDDRQWFKSHAG-LDVTQTSRDVSFCSHALLEGNT--MVIQDALNDNR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G PG+RFY G PL A NG IGTLC D +PR + +L +LA + R
Sbjct: 98 FHDNPLVTGAPGIRFYAGRPLTAPNGAPIGTLCLIDTRPRSLEPDELALLGDLAHMTERE 157
Query: 362 L 364
+
Sbjct: 158 I 158
[38][TOP]
>UniRef100_C4T4E6 Diguanylate cyclase (GGDEF domain) n=1 Tax=Yersinia intermedia ATCC
29909 RepID=C4T4E6_YERIN
Length = 330
Score = 86.3 bits (212), Expect = 1e-15
Identities = 48/133 (36%), Positives = 75/133 (56%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P AL+++ D R + + G + P SFCG + D I+++P+AL D R
Sbjct: 43 LFDVPIALISIVDVNRQWFKSHPGLVT-SETPRDISFCGHAILG--DDILLVPNALDDIR 99
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V PG+RFY G PL+ NG ++GTLC D+KPR D +L +LA++ +
Sbjct: 100 FSDNPLVTDDPGIRFYAGCPLVVPNGSKLGTLCLIDLKPRILDEYDQQLLCDLAKMAEQE 159
Query: 362 LEKDIALQLRAHD 400
+ A+QL D
Sbjct: 160 I---AAVQLATID 169
[39][TOP]
>UniRef100_A4JE43 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia
vietnamiensis G4 RepID=A4JE43_BURVG
Length = 323
Score = 85.9 bits (211), Expect = 1e-15
Identities = 47/121 (38%), Positives = 66/121 (54%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P A+V+L D+ R + + G SFC + + D MV+ DAL D R
Sbjct: 41 LFDVPIAVVSLVDEDRQWFKSHPG-LDATQTSRDVSFCAHALLA--DDTMVVKDALNDDR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G PG+RFY G PL A NG +GTLC D +PRE A +L +LA + R
Sbjct: 98 FHDNPLVTGQPGIRFYAGRPLAAPNGAPVGTLCLIDTRPRELCADELALLGDLAHMTERE 157
Query: 362 L 364
+
Sbjct: 158 I 158
[40][TOP]
>UniRef100_Q3BUK7 Putative phosphodiesterase n=1 Tax=Xanthomonas campestris pv.
vesicatoria str. 85-10 RepID=Q3BUK7_XANC5
Length = 666
Score = 85.5 bits (210), Expect = 2e-15
Identities = 50/121 (41%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Frame = +2
Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
+A ALV+L D+ R + + G R + P +FC A R+D++MV+PDA D RFC
Sbjct: 99 DAEIALVSLVDEHRQWFKARIGLEAR-ETPRSQAFCAH--AIRSDEVMVVPDARLDPRFC 155
Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRHL 364
+N +V G P +RFY G PL +GH IGTLC PR DA+ L L +L V +
Sbjct: 156 DNPLVMGPPFIRFYAGAPLKLRDGHSIGTLCVIGTSPRPGLDAAAITQLEGLRDLAVLRV 215
Query: 365 E 367
E
Sbjct: 216 E 216
[41][TOP]
>UniRef100_A9WA16 Diguanylate cyclase n=2 Tax=Chloroflexus RepID=A9WA16_CHLAA
Length = 370
Score = 85.5 bits (210), Expect = 2e-15
Identities = 47/122 (38%), Positives = 70/122 (57%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I + P ALV L D R + G F G+ +FC +T+ + D +MV+PDA +D R
Sbjct: 53 ICQTPIALVNLVDRHRQWSMARLG-FSDGEVERTLTFCAFTI-NDPDHVMVVPDATRDPR 110
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N VR P +RFY G PL+ S+G+ +GT+C D++PR+ + +L L+ VV
Sbjct: 111 FASNPYVRREPYIRFYAGAPLVTSHGYALGTVCVIDLQPRQLSPEQLEMLRLLSRQVVTQ 170
Query: 362 LE 367
LE
Sbjct: 171 LE 172
[42][TOP]
>UniRef100_Q2BQ10 Diguanylate cyclase, putative n=1 Tax=Neptuniibacter caesariensis
RepID=Q2BQ10_9GAMM
Length = 327
Score = 85.5 bits (210), Expect = 2e-15
Identities = 51/133 (38%), Positives = 71/133 (53%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF+ P ALV+L D R + + G + SFCG + +DQ+ VI +AL+D R
Sbjct: 47 IFDVPIALVSLVDTNRQWFKSCMG-LDASETGRDISFCGHAIL--DDQVFVINNALQDPR 103
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PL G R+GTLC D KPR+F + L +LA + +
Sbjct: 104 FADNPLVTDAPHIRFYAGCPLRDVGGQRLGTLCLIDTKPRDFSHDDVIALKDLAAMAEQE 163
Query: 362 LEKDIALQLRAHD 400
L A+QL D
Sbjct: 164 L---AAVQLATTD 173
[43][TOP]
>UniRef100_A4BK94 Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain
n=1 Tax=Reinekea blandensis MED297 RepID=A4BK94_9GAMM
Length = 301
Score = 85.5 bits (210), Expect = 2e-15
Identities = 56/154 (36%), Positives = 82/154 (53%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
F P ALV+L D+ R + + G R SFCG + S D ++VI + L D+RF
Sbjct: 42 FHVPIALVSLVDENRQWFKSCFGLDVRHT-DRNISFCGHAIHS--DALLVIENTLIDSRF 98
Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364
+N +V G P +RFY G PL A G RIGTLC D KPR+ D S L LA++V + L
Sbjct: 99 HDNPLVIGNPHIRFYAGAPLHAPEGERIGTLCLIDRKPRQLDHSERKQLRQLADIVEQEL 158
Query: 365 EKDIALQLRAHDNNSLAAAYGXLRRTLDCFDHCV 466
++++ + D+ + + LD D+C+
Sbjct: 159 ---VSVRSSSMDSET---ELSNRKGLLDLADYCL 186
[44][TOP]
>UniRef100_UPI0001A446DD putative signaling protein n=1 Tax=Pectobacterium carotovorum
subsp. brasiliensis PBR1692 RepID=UPI0001A446DD
Length = 722
Score = 85.1 bits (209), Expect = 2e-15
Identities = 55/124 (44%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Frame = +2
Query: 2 IFEAPAALVALFD-DRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDA 178
IF P LV+L + +R++F F + P SFC T+ + +IMV+ DALKDA
Sbjct: 41 IFSVPIVLVSLVETERQLFAASVGVPFC--ETPRDISFCAHTILKK--KIMVVHDALKDA 96
Query: 179 RFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVV 355
RF NN +V G P +RFY G PL+ +GH IGTLC D+KPR R L++LA LV+
Sbjct: 97 RFKNNPLVVGVPYIRFYAGIPLMTPSGHAIGTLCIIDLKPRTTFTKRDEHNLHDLASLVM 156
Query: 356 RHLE 367
LE
Sbjct: 157 DKLE 160
[45][TOP]
>UniRef100_Q1YRB1 Diguanylate cyclase, putative n=1 Tax=gamma proteobacterium
HTCC2207 RepID=Q1YRB1_9GAMM
Length = 319
Score = 85.1 bits (209), Expect = 2e-15
Identities = 52/133 (39%), Positives = 73/133 (54%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P ALV+L D R + + G + P SFCG ++ +++ +IPDA D R
Sbjct: 41 LFDVPIALVSLVDKDRQWFKSRIG-LPVSETPRDISFCGHSILG--EEVFIIPDASSDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PL A NG +IGTLC D KPR+F + L +LA + +
Sbjct: 98 FQDNPLVIDKPNIRFYAGCPLRALNGTQIGTLCIIDDKPRDFSEADLSALTDLAAMAEQE 157
Query: 362 LEKDIALQLRAHD 400
L ALQL D
Sbjct: 158 L---AALQLAVLD 167
[46][TOP]
>UniRef100_C9Y4F4 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis
RepID=C9Y4F4_9ENTR
Length = 329
Score = 85.1 bits (209), Expect = 2e-15
Identities = 44/117 (37%), Positives = 68/117 (58%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F AP AL++L D +++ +G + P SFCG T+ N+ ++I DAL D R
Sbjct: 47 LFNAPVALISLVDQEQLWFASCDGVEPK-PIPRNVSFCGHTIL--NNAPLIITDALSDER 103
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
F +N +V G P +RFY G P+ +G G+LC D +PREF + ++L +LA +V
Sbjct: 104 FHDNALVNGPPHIRFYAGCPVQLPDGATAGSLCIIDTEPREFSEADTLLLRDLAAIV 160
[47][TOP]
>UniRef100_UPI00018735BF GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas
syringae pv. tomato T1 RepID=UPI00018735BF
Length = 607
Score = 84.7 bits (208), Expect = 3e-15
Identities = 47/121 (38%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
F+ P ALV++ D+ R + R G R + P SFC +T+ S + IPDA D RF
Sbjct: 43 FQTPIALVSIVDEHRQWFRARVGLSAR-ETPRNVSFCAYTILSHT--LFEIPDATLDERF 99
Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRH 361
NN +V G P +R+Y G PLI +G +G+LC D KPRE + +L A LV++
Sbjct: 100 MNNSLVTGHPDIRYYAGAPLITDDGLALGSLCVIDTKPREPMSEHQTQMLKRFASLVMKR 159
Query: 362 L 364
+
Sbjct: 160 I 160
[48][TOP]
>UniRef100_Q48E25 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas
syringae pv. phaseolicola 1448A RepID=Q48E25_PSE14
Length = 620
Score = 84.7 bits (208), Expect = 3e-15
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 1/121 (0%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
F+ P AL+++ D+ R + R G + P SFC +T+ S D + IPDA D RF
Sbjct: 56 FQTPIALISIVDEHRQWFRARVG-LNAQETPRNVSFCAYTILS--DSLFEIPDATLDDRF 112
Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRH 361
NN +V G P +R+Y G PLI +G +G+LC D KPRE + +L A LV++
Sbjct: 113 MNNSLVTGHPDIRYYAGAPLITDDGIALGSLCVIDTKPREPMSEHQMQMLKRFASLVMKR 172
Query: 362 L 364
+
Sbjct: 173 I 173
[49][TOP]
>UniRef100_B8HS57 Sensor protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HS57_CYAP4
Length = 1965
Score = 84.7 bits (208), Expect = 3e-15
Identities = 45/127 (35%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P LV+L D+ R + + G F + + + C +T+ +D + V+PDA +D R
Sbjct: 50 LFGVPIVLVSLVDETRAWFKSCYG-FNQQEVARDATICSFTLL--HDDVFVVPDARQDDR 106
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358
F N +V+ PG+RFY G PL+ ++G +GTLC D +PR+ A + L +LA +V+
Sbjct: 107 FACNPLVKAEPGLRFYAGAPLLTADGFNLGTLCLLDTQPRDSLTAEQRATLTDLAAMVMD 166
Query: 359 HLEKDIA 379
LE +A
Sbjct: 167 ELELRLA 173
[50][TOP]
>UniRef100_A4SI79 GGDEF domain protein n=1 Tax=Aeromonas salmonicida subsp.
salmonicida A449 RepID=A4SI79_AERS4
Length = 318
Score = 84.7 bits (208), Expect = 3e-15
Identities = 50/133 (37%), Positives = 74/133 (55%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P +LV+L D+ R + + G + P SFCG + D + V+ DA +D R
Sbjct: 41 MFDVPISLVSLVDEDRQWFKSCCG-LPVPETPRDISFCGHAILG--DDLFVVEDATRDLR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +RFY G+PL G+++GTLC D KPR D + +L +LA +V R
Sbjct: 98 FADNPLVSGDPHIRFYAGSPLQIGEGYKLGTLCIIDRKPRLLDERQRDLLTDLAGMVERE 157
Query: 362 LEKDIALQLRAHD 400
L A+QL D
Sbjct: 158 L---AAIQLATMD 167
[51][TOP]
>UniRef100_UPI0001AF4C5A GAF domain/GGDEF domain/EAL domain-containing protein n=1
Tax=Pseudomonas syringae pv. oryzae str. 1_6
RepID=UPI0001AF4C5A
Length = 607
Score = 84.3 bits (207), Expect = 4e-15
Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
F+AP +LV++ D+ R + R G K + P SFC +T+ S D +PDA D RF
Sbjct: 43 FQAPISLVSIVDENRQWFRARVG-LKPRETPRNVSFCAYTILS--DVPFEVPDATIDERF 99
Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRH 361
NN +V G P +R+Y G PLI +G +G+LC D KPRE + ++L A LV++
Sbjct: 100 VNNGLVTGHPDIRYYAGAPLITDDGLALGSLCVIDTKPREPMSEHQMLMLKRFASLVMKR 159
Query: 362 L 364
+
Sbjct: 160 I 160
[52][TOP]
>UniRef100_Q8PLK2 Putative uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv.
citri RepID=Q8PLK2_XANAC
Length = 618
Score = 84.3 bits (207), Expect = 4e-15
Identities = 49/121 (40%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Frame = +2
Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
+A A+V+L D+ R + + G R + P +FC A R+D++MV+PDA D RFC
Sbjct: 51 DAEIAVVSLVDEHRQWFKARIGLEAR-ETPRSQAFCAH--AIRSDEVMVVPDAQLDPRFC 107
Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRHL 364
+N +V G P +RFY G PL +GHRIGTLC PR D + L L +L V +
Sbjct: 108 DNPLVLGPPFIRFYAGAPLKLRDGHRIGTLCVIGTSPRPGLDQAAITQLEGLRDLAVLRV 167
Query: 365 E 367
E
Sbjct: 168 E 168
[53][TOP]
>UniRef100_Q4ZR61 PAS:GGDEF n=1 Tax=Pseudomonas syringae pv. syringae B728a
RepID=Q4ZR61_PSEU2
Length = 732
Score = 84.3 bits (207), Expect = 4e-15
Identities = 47/123 (38%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF+ P L++L R F + G + SFC + + RN + ++PDAL+D R
Sbjct: 41 IFDLPIVLISLVHRDRQFFKARVG-LDVCETGRDVSFCNFALMGRN--VFLVPDALQDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358
F +N +V G P +RFY G PLI ++GH +G+LC D KPRE F +VL +LA +++
Sbjct: 98 FSSNALVVGAPHIRFYAGAPLITASGHVLGSLCLIDNKPRETFSERDQLVLQDLAVMIIE 157
Query: 359 HLE 367
+E
Sbjct: 158 RME 160
[54][TOP]
>UniRef100_Q48GS4 Sensory box/GGDEF family protein n=1 Tax=Pseudomonas syringae pv.
phaseolicola 1448A RepID=Q48GS4_PSE14
Length = 732
Score = 84.3 bits (207), Expect = 4e-15
Identities = 48/123 (39%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF+ P L++L R F + G + SFC + + RN + ++PDAL+D R
Sbjct: 41 IFDVPIVLISLVHRDRQFFKARIG-LDVCETGRDVSFCNFALMGRN--VFLVPDALQDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358
F +N +V G P +RFY G PLI ++GH +G+LC D KPRE F +VL +LA +V+
Sbjct: 98 FSSNALVVGAPYIRFYAGAPLITASGHVLGSLCLIDNKPRETFSQRDQLVLQDLAVIVIE 157
Query: 359 HLE 367
+E
Sbjct: 158 RME 160
[55][TOP]
>UniRef100_B8G5J8 Diguanylate cyclase with GAF sensor n=1 Tax=Chloroflexus aggregans
DSM 9485 RepID=B8G5J8_CHLAD
Length = 367
Score = 84.3 bits (207), Expect = 4e-15
Identities = 47/122 (38%), Positives = 67/122 (54%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I + P ALV L D R + + G F + + +FC +T+ + D + V+PDA D R
Sbjct: 51 ICQTPMALVNLIDRDRQWSKARLG-FTDSEVDRKLAFCSYTI-NYPDDVFVVPDATCDER 108
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N V G P +RFY G PL+ NG+ +GT+C DV+P + +L LA VVR
Sbjct: 109 FAHNPFVCGDPYIRFYAGAPLVTPNGYALGTVCVVDVRPHRLTPEQIEMLRVLARQVVRQ 168
Query: 362 LE 367
LE
Sbjct: 169 LE 170
[56][TOP]
>UniRef100_A3JB69 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax=Marinobacter sp.
ELB17 RepID=A3JB69_9ALTE
Length = 806
Score = 84.3 bits (207), Expect = 4e-15
Identities = 46/122 (37%), Positives = 65/122 (53%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
+ P AL +L D++R + + G + + P +FC A R D + V+ DA KD RF
Sbjct: 53 YNTPIALFSLLDEKRQWFKSKRGLDLK-ETPRSIAFCDH--AIRQDSVFVVADASKDERF 109
Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364
CNN MV G +RFY G P+ G ++GTLC D KPR+ VL LA L+ +
Sbjct: 110 CNNPMVTGESHIRFYAGMPVREPGGFKMGTLCIMDHKPRDIPEHELDVLRTLASLIEDEV 169
Query: 365 EK 370
E+
Sbjct: 170 ER 171
[57][TOP]
>UniRef100_B7FU53 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7FU53_PHATR
Length = 153
Score = 84.0 bits (206), Expect = 5e-15
Identities = 46/121 (38%), Positives = 72/121 (59%), Gaps = 3/121 (2%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF P ALV+L D R + G + P +++FC + ++++ ++V+PDA KD R
Sbjct: 35 IFNVPIALVSLVDLGRQWFMSNRGLGSVRETPRKYAFCAHAILNKHN-LLVVPDASKDFR 93
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE---FDASRCVVLNNLAELV 352
F N +V G P +RFY G+PL++ G+++GTLC D K R DA + L +LA++V
Sbjct: 94 FETNPLVTGPPNIRFYAGSPLVSPEGYKLGTLCIIDSKVRPEGLLDAEK-ATLRDLADMV 152
Query: 353 V 355
V
Sbjct: 153 V 153
[58][TOP]
>UniRef100_Q4UNM5 Putative uncharacterized protein n=1 Tax=Xanthomonas campestris pv.
campestris str. 8004 RepID=Q4UNM5_XANC8
Length = 582
Score = 83.6 bits (205), Expect = 6e-15
Identities = 45/133 (33%), Positives = 71/133 (53%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P ALV+L D+ R + + G P +FC + +D +M +P+A D RF N
Sbjct: 49 PIALVSLVDEHRQWWKANVGLPGVSQTPRELAFCAHAIL--DDAVMEVPNASDDPRFSGN 106
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373
E+V PG+R+Y G P++ S+G R+GT+C D +PR+ ++ L +LA + LE+
Sbjct: 107 ELVTDAPGIRYYAGAPIVLSDGLRMGTVCVIDQRPRQLQPAQLEALRHLARVAAEGLEQR 166
Query: 374 IALQLRAHDNNSL 412
+ RA N L
Sbjct: 167 RLMLERAETNAQL 179
[59][TOP]
>UniRef100_B0RMK5 Putative signal transduction protein n=2 Tax=Xanthomonas campestris
pv. campestris RepID=B0RMK5_XANCB
Length = 582
Score = 83.6 bits (205), Expect = 6e-15
Identities = 45/133 (33%), Positives = 71/133 (53%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P ALV+L D+ R + + G P +FC + +D +M +P+A D RF N
Sbjct: 49 PIALVSLVDEHRQWWKANVGLPGVSQTPRELAFCAHAIL--DDAVMEVPNASDDPRFSGN 106
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373
E+V PG+R+Y G P++ S+G R+GT+C D +PR+ ++ L +LA + LE+
Sbjct: 107 ELVTDAPGIRYYAGAPIVLSDGLRMGTVCVIDQRPRQLQPAQLEALRHLARVAAEGLEQR 166
Query: 374 IALQLRAHDNNSL 412
+ RA N L
Sbjct: 167 RLMLERAETNAQL 179
[60][TOP]
>UniRef100_A9BX42 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1
Tax=Delftia acidovorans SPH-1 RepID=A9BX42_DELAS
Length = 594
Score = 83.6 bits (205), Expect = 6e-15
Identities = 46/122 (37%), Positives = 66/122 (54%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F AP A++ + D+ R + + G G +FC T+ RN+ IMVIPD D+R
Sbjct: 41 MFMAPIAIITVLDEHRQWFKAPVGVDMDGSLRTD-AFCDHTI--RNEGIMVIPDTHLDSR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F N +V P +RFY G PLI +GH IG+LC D +PR F + L +A +V
Sbjct: 98 FSENPLVTHKPNIRFYAGVPLIMESGHAIGSLCIIDTRPRTFSEEQGQQLQAMAAIVQAQ 157
Query: 362 LE 367
L+
Sbjct: 158 LQ 159
[61][TOP]
>UniRef100_A3VSH9 FOG: GGDEF domain protein n=1 Tax=Parvularcula bermudensis HTCC2503
RepID=A3VSH9_9PROT
Length = 388
Score = 83.6 bits (205), Expect = 6e-15
Identities = 47/120 (39%), Positives = 68/120 (56%)
Frame = +2
Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
+ P ALV+L DD R + + G + P +FC A +ND +V+ +AL+D RF
Sbjct: 41 DVPVALVSLVDDHRQWFKARLG-IDDPETPREIAFCAH--AIQNDDPLVVENALEDPRFR 97
Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+N +V G VRFY G P+I S G+R+GT+C D PR+ + +L +LA L R LE
Sbjct: 98 SNPLVTGDTHVRFYAGAPIILSGGYRLGTVCVLDTNPRQISEGQRQILVDLAGLAARELE 157
[62][TOP]
>UniRef100_Q98BW5 Mlr5400 protein n=1 Tax=Mesorhizobium loti RepID=Q98BW5_RHILO
Length = 416
Score = 83.2 bits (204), Expect = 8e-15
Identities = 49/146 (33%), Positives = 78/146 (53%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P A+V++ D R + + EG + + +FC +T+ ++ +++ DA KD R
Sbjct: 50 VFDVPIAIVSVIDGHRQWYKACEG-LAINEVERKATFCQYTILQ--EEPLIVTDATKDPR 106
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N MVR P +RFY G PL + +GH IG++C PREF +L + A+L +
Sbjct: 107 FADNPMVRNDPHIRFYAGVPLRSRDGHNIGSVCAIGYIPREFSDRDIAILQDFADLAMDE 166
Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRR 439
LE LR H ++ A G L R
Sbjct: 167 LE------LRQHASSD--AVTGVLSR 184
[63][TOP]
>UniRef100_Q8DJE3 Sensor protein n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DJE3_THEEB
Length = 1353
Score = 83.2 bits (204), Expect = 8e-15
Identities = 45/122 (36%), Positives = 66/122 (54%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I E P AL++L D +R + + G + P +FC + DQ++++PDA D R
Sbjct: 41 ICETPIALISLVDRQRQWFKSKVG-IDACETPRNVAFCAHVILQ--DQLVIVPDARLDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N V G P +RFY G PL+ G+ IGTLC D +PR+ + + L LA V+
Sbjct: 98 FADNPFVTGPPYIRFYAGMPLVTPQGYGIGTLCVVDYQPRQLNPVQQQTLRTLARQVINE 157
Query: 362 LE 367
LE
Sbjct: 158 LE 159
[64][TOP]
>UniRef100_Q7U978 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 8102
RepID=Q7U978_SYNPX
Length = 239
Score = 82.8 bits (203), Expect = 1e-14
Identities = 58/163 (35%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+ P AL++L D R + + G + + P WSFC + S + ++IPDAL D R
Sbjct: 41 VCSTPIALLSLIDTDRQWFKSKVGV-EIQETPRDWSFCAHAIHSSDP--LIIPDALMDDR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +R Y G PL S R+GTLC D PR+ + C V+ LA VV
Sbjct: 98 FRDNPLVCGDPNIRLYAGFPLENSKALRVGTLCVIDRVPRQLNDKECGVMKALARQVVSF 157
Query: 362 LE---KDIAL--QLRAH-DNNSLAAAYGXLRRTLDCFDHCVAL 472
LE K I L AH +NN + + R+ D H + L
Sbjct: 158 LELRKKSINLIESFCAHTENNRMISTCSYCRKAQDKNGHWMHL 200
[65][TOP]
>UniRef100_Q07Y18 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella
frigidimarina NCIMB 400 RepID=Q07Y18_SHEFN
Length = 327
Score = 82.8 bits (203), Expect = 1e-14
Identities = 45/121 (37%), Positives = 63/121 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F ++V+L D R + + +G + SFCG A ++V+PDALKD R
Sbjct: 41 LFSVSISVVSLIDSERQWFKSVQG-LDICETQRDISFCGH--AINQQHVLVVPDALKDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PL NG R+GTLC D KPR F L +L ++V
Sbjct: 98 FADNPLVLAAPNIRFYAGYPLTMPNGVRVGTLCIIDDKPRSFSKDDEAALEDLGKIVAEE 157
Query: 362 L 364
L
Sbjct: 158 L 158
[66][TOP]
>UniRef100_C6XJK2 Sensor protein n=1 Tax=Hirschia baltica ATCC 49814
RepID=C6XJK2_HIRBI
Length = 814
Score = 82.8 bits (203), Expect = 1e-14
Identities = 44/117 (37%), Positives = 65/117 (55%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P ALV+L D+ R + + G + SFC + S N +MV+ +A++D +
Sbjct: 38 MFDVPIALVSLVDENRQWFKSNCGLDGVTETARDISFCQHAIKSTN--VMVVENAIEDEK 95
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
+ N +V G P +RFY G PLI GH +GTLC D KPR+F A +L LA +
Sbjct: 96 YDQNPLVLGEPSIRFYAGAPLITEEGHALGTLCLIDRKPRKFSAQEQALLVRLATTI 152
[67][TOP]
>UniRef100_B2SZU2 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia
phytofirmans PsJN RepID=B2SZU2_BURPP
Length = 326
Score = 82.8 bits (203), Expect = 1e-14
Identities = 49/137 (35%), Positives = 72/137 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P ALV+L D R + + G + + SFC + D+I+++PD L D R
Sbjct: 41 LFGVPIALVSLVDADRQWFKSCVG-LEASETSRDVSFCAHAILG--DEILMVPDTLADER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PL NG ++GTLC D KPR D +L +LA + +
Sbjct: 98 FHDNPLVTDNPSIRFYAGCPLTVPNGSKLGTLCLIDTKPRGLDEEERQLLRDLARMAEQE 157
Query: 362 LEKDIALQLRAHDNNSL 412
L A+QL D+ +L
Sbjct: 158 L---AAVQLATLDDLTL 171
[68][TOP]
>UniRef100_A1TRS2 Diguanylate phosphodiesterase with GAF sensor n=1 Tax=Acidovorax
citrulli AAC00-1 RepID=A1TRS2_ACIAC
Length = 595
Score = 82.8 bits (203), Expect = 1e-14
Identities = 48/126 (38%), Positives = 71/126 (56%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P ALV+L D R + + G R + +FC T+ R ++MV+ DAL+D R
Sbjct: 39 LFDVPIALVSLVDADRQWFKSQIGLPVR-ETCREDAFCDHTI--RTSEVMVVEDALQDPR 95
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F N +V+G P +RFY G PLI H +G+LC D PR FD ++ L +LA LV+
Sbjct: 96 FAANPLVQGPPHIRFYAGAPLILRGHHHLGSLCLIDSVPRAFDTAQQRQLADLAALVMAQ 155
Query: 362 LEKDIA 379
++ A
Sbjct: 156 IDLQCA 161
[69][TOP]
>UniRef100_C9NSQ2 GGDEF domain protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450
RepID=C9NSQ2_9VIBR
Length = 319
Score = 82.8 bits (203), Expect = 1e-14
Identities = 48/129 (37%), Positives = 70/129 (54%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P A+V+L D+ R + + G R + SFCG + +D +I DA KD R
Sbjct: 41 LFDVPIAVVSLVDNHRQWFKSCIGLPVR-ETARNVSFCGHVI--NDDGPFIINDATKDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +RFY G PL+ N ++GTLC D KPRE + L +LA++ +
Sbjct: 98 FLDNPLVMGEPFIRFYAGVPLVYHNQSKLGTLCIIDTKPRELTMQQMADLVDLAKVAEQE 157
Query: 362 LEKDIALQL 388
LE I L
Sbjct: 158 LEATIQATL 166
[70][TOP]
>UniRef100_B8EE24 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella baltica
OS223 RepID=B8EE24_SHEB2
Length = 323
Score = 82.4 bits (202), Expect = 1e-14
Identities = 47/121 (38%), Positives = 63/121 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF P +V L D R + + +G + + P SFCG A D I ++ DALKD R
Sbjct: 41 IFSLPICVVTLVDAERQWFKSRQG-LEVTETPREISFCGH--AINQDDIFIVNDALKDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PL +R+GTLC +PREF A L +L E+V
Sbjct: 98 FSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPREFTAEDIETLTDLGEMVEAE 157
Query: 362 L 364
L
Sbjct: 158 L 158
[71][TOP]
>UniRef100_B4RWH1 Sensor protein n=1 Tax=Alteromonas macleodii 'Deep ecotype'
RepID=B4RWH1_ALTMD
Length = 542
Score = 82.4 bits (202), Expect = 1e-14
Identities = 47/122 (38%), Positives = 67/122 (54%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I + P AL++L D R + + G + +FC + A D + IP+A D R
Sbjct: 41 ICDTPIALISLIDPDRQWFKSRVG-LDAEETSREIAFC--SHAILQDDVFEIPNASLDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +RFY G PL++ +GH IGTLC D KPR+ S+ L L++ VV H
Sbjct: 98 FHDNPLVTGAPDIRFYAGAPLVSPSGHAIGTLCTIDRKPRKLTESQKTSLQTLSKSVVAH 157
Query: 362 LE 367
LE
Sbjct: 158 LE 159
[72][TOP]
>UniRef100_A5GSN2 GAF domain protein n=1 Tax=Synechococcus sp. RCC307
RepID=A5GSN2_SYNR3
Length = 238
Score = 82.4 bits (202), Expect = 1e-14
Identities = 46/118 (38%), Positives = 65/118 (55%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P AL++L D + + + G R + P WSFC +A + + M+I DAL D RF +N
Sbjct: 48 PIALMSLVSDEKQWFKSTVGLEAR-ETPRDWSFCAHAIA--DSEPMIIEDALNDTRFRHN 104
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+V G P +R Y G PL HR+GTLC D KP ++ +V+ +LA VV LE
Sbjct: 105 PLVSGDPNIRLYAGFPLETPAEHRLGTLCVIDRKPGALSDAQLIVMKSLARQVVTLLE 162
[73][TOP]
>UniRef100_A3D858 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella baltica
OS155 RepID=A3D858_SHEB5
Length = 323
Score = 82.4 bits (202), Expect = 1e-14
Identities = 47/121 (38%), Positives = 63/121 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF P +V L D R + + +G + + P SFCG A D I ++ DALKD R
Sbjct: 41 IFSLPICVVTLVDAERQWFKSRQG-LEVTETPREISFCGH--AINQDDIFIVNDALKDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PL +R+GTLC +PREF A L +L E+V
Sbjct: 98 FSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPREFTAEDIETLTDLGEMVEAE 157
Query: 362 L 364
L
Sbjct: 158 L 158
[74][TOP]
>UniRef100_O52937 Sensor protein n=1 Tax=Calothrix viguieri RepID=O52937_9CYAN
Length = 744
Score = 82.4 bits (202), Expect = 1e-14
Identities = 47/138 (34%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P LV+L D+ R + + + G F+ + + C + + S D+++VIPD +D+R
Sbjct: 50 LFNVPITLVSLVDESRGWFKSSYG-FEMREVRRDTTICSFALLS--DEVLVIPDTREDSR 106
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358
N V+ PG+RFY G PL+ +G +GTLC D KPR+ + VL++LA +V+
Sbjct: 107 LVCNPFVQNEPGLRFYAGAPLLTQDGFNLGTLCLLDTKPRDGLSDEQKSVLSDLAAMVMD 166
Query: 359 HLEKDIALQLRAHDNNSL 412
LE +A + A + +L
Sbjct: 167 ELELRLAARKVAQMDTAL 184
[75][TOP]
>UniRef100_B7S3A7 Sensor protein n=1 Tax=marine gamma proteobacterium HTCC2148
RepID=B7S3A7_9GAMM
Length = 552
Score = 82.4 bits (202), Expect = 1e-14
Identities = 50/128 (39%), Positives = 67/128 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+ E P ALV+L D R + + G + D SFCG + D+I V+ DALKD+R
Sbjct: 41 VCETPIALVSLVDKHRQWFKSRAG-LEATDTHRDLSFCGHAIL--RDEIFVVEDALKDSR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F NN +V P +RFY G PL G IGTLC D PR+ ++ L L+ V+
Sbjct: 98 FINNPLVLDHPNIRFYAGAPLKTPAGENIGTLCVIDTIPRKLTEAQKNSLVALSRQVIAQ 157
Query: 362 LEKDIALQ 385
+E ALQ
Sbjct: 158 IELRFALQ 165
[76][TOP]
>UniRef100_UPI0001694826 hypothetical protein Xoryp_10570 n=1 Tax=Xanthomonas oryzae pv.
oryzicola BLS256 RepID=UPI0001694826
Length = 618
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/117 (41%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Frame = +2
Query: 20 ALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEM 199
ALV+L D+ R + + G +R + P +FC T A R+D++MV+ DA D R+C+N +
Sbjct: 55 ALVSLVDEHRQWFKARIGLEER-ETPRSQAFC--THAIRSDEVMVVLDARLDPRWCDNPL 111
Query: 200 VRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRHLE 367
V G P +RFY G PL +GH IGTLC PRE DA+ L L +L V +E
Sbjct: 112 VLGPPFIRFYVGAPLKLRDGHSIGTLCAIGTSPREGLDAAAITQLEGLRDLAVLRVE 168
[77][TOP]
>UniRef100_Q6F7V1 Sensor protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6F7V1_ACIAD
Length = 419
Score = 82.0 bits (201), Expect = 2e-14
Identities = 44/122 (36%), Positives = 68/122 (55%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I +AP ++++L D+ R + + + G RG+ ++S C + + +I V+ D L D R
Sbjct: 41 ICDAPVSIISLIDETRSWFKSSHGV-PRGEVDRKYSICSHAILQK--EIFVVEDTLLDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V+G VRFY G PL S+G +GTLC D KPR + L+ LA VV+
Sbjct: 98 FHDNPIVQGELAVRFYAGAPLTTSDGFNLGTLCLVDSKPRTLSEDQYKALSVLAVQVVQQ 157
Query: 362 LE 367
E
Sbjct: 158 FE 159
[78][TOP]
>UniRef100_A1ZZA1 Two-component hybrid sensor and regulator n=1 Tax=Microscilla
marina ATCC 23134 RepID=A1ZZA1_9SPHI
Length = 460
Score = 82.0 bits (201), Expect = 2e-14
Identities = 45/133 (33%), Positives = 71/133 (53%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I E P +L++L + + + + G R + P +FC A N ++ ++ DA KD R
Sbjct: 41 ICETPISLMSLVAEDKQWFKAKVGLEPR-ETPREQAFCAH--AIHNPELFIVEDATKDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +RFY G PL +G +GTLC D +PR+ ++ L LA V+
Sbjct: 98 FHDNPLVTGNPDIRFYAGMPLTTPDGFSLGTLCVIDKRPRDLSEAQKTALKTLASQVIAQ 157
Query: 362 LEKDIALQLRAHD 400
LE + L+ AH+
Sbjct: 158 LELRLKLETIAHE 170
[79][TOP]
>UniRef100_Q7NVX0 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum
RepID=Q7NVX0_CHRVO
Length = 168
Score = 81.6 bits (200), Expect = 2e-14
Identities = 48/121 (39%), Positives = 61/121 (50%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
F AL++L D R++ + G + P SFC + D I+ IPDA D RF
Sbjct: 42 FAVKIALISLVDSDRLWFKSRCG-LDASETPRDISFCAHAILG--DDILEIPDASNDNRF 98
Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364
+N MV G P +RFY G PL S+GH IGTLC D KP+ L LA VV +
Sbjct: 99 SDNPMVLGDPNIRFYAGAPLKLSSGHTIGTLCLIDPKPKRLAGEEKRHLKTLAHTVVLEI 158
Query: 365 E 367
E
Sbjct: 159 E 159
[80][TOP]
>UniRef100_Q2P386 Putative uncharacterized protein XOO2236 n=2 Tax=Xanthomonas oryzae
pv. oryzae RepID=Q2P386_XANOM
Length = 618
Score = 81.6 bits (200), Expect = 2e-14
Identities = 49/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = +2
Query: 20 ALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEM 199
ALV+L D+ R + + G +R + P +FC T A R+D++MV+ DA D R C+N +
Sbjct: 55 ALVSLVDEHRQWFKTRIGLEER-ETPRSQAFC--THAIRSDEVMVVLDARLDPRLCDNPL 111
Query: 200 VRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRHLE 367
V G P +RFY G PL +GH IGTLC PRE DA L L +L V +E
Sbjct: 112 VLGPPFIRFYVGAPLKLRDGHSIGTLCAIGTSPREGLDAGAITQLEGLRDLAVLRVE 168
[81][TOP]
>UniRef100_B2SJM9 Putative signal protein with GAF, GGDEF and EAL domains n=1
Tax=Xanthomonas oryzae pv. oryzae PXO99A
RepID=B2SJM9_XANOP
Length = 595
Score = 81.6 bits (200), Expect = 2e-14
Identities = 49/117 (41%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = +2
Query: 20 ALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEM 199
ALV+L D+ R + + G +R + P +FC T A R+D++MV+ DA D R C+N +
Sbjct: 32 ALVSLVDEHRQWFKTRIGLEER-ETPRSQAFC--THAIRSDEVMVVLDARLDPRLCDNPL 88
Query: 200 VRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVRHLE 367
V G P +RFY G PL +GH IGTLC PRE DA L L +L V +E
Sbjct: 89 VLGPPFIRFYVGAPLKLRDGHSIGTLCAIGTSPREGLDAGAITQLEGLRDLAVLRVE 145
[82][TOP]
>UniRef100_A6G6E5 GAF domain n=1 Tax=Plesiocystis pacifica SIR-1 RepID=A6G6E5_9DELT
Length = 369
Score = 81.6 bits (200), Expect = 2e-14
Identities = 46/121 (38%), Positives = 66/121 (54%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
F+ P A ++L ++ R + + G G +FC T A D+++++PDA +D RF
Sbjct: 45 FDVPMAFISLINEDRHWTKAGIGY--SGSIARDITFC--THAIEADEVLLVPDATQDERF 100
Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364
N +V GVRFY G PL+ GHR+GT+C DV+PR V+L LA VV L
Sbjct: 101 AANPLVEPEGGVRFYAGAPLVVPGGHRLGTVCAVDVRPRTPKRELLVLLGALARQVVELL 160
Query: 365 E 367
E
Sbjct: 161 E 161
[83][TOP]
>UniRef100_UPI00003839DD COG2203: FOG: GAF domain n=1 Tax=Magnetospirillum magnetotacticum
MS-1 RepID=UPI00003839DD
Length = 311
Score = 81.3 bits (199), Expect = 3e-14
Identities = 53/159 (33%), Positives = 84/159 (52%), Gaps = 11/159 (6%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
F ALV+L D R + + +G + P SFCG + ++I V+ +A++ F
Sbjct: 23 FGVAIALVSLVDADRQWFKSCQG-IDASETPRNISFCGHAIL--REEIFVVTNAIEHPDF 79
Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLA-----EL 349
+N +V G P +RFY G PL A +G R+GTLC D +PR+F A VL +LA EL
Sbjct: 80 ADNPLVIGPPNIRFYAGAPLHAPDGERVGTLCVIDPRPRDFSAEDSDVLRDLANCVEGEL 139
Query: 350 VVRHLEKDIALQLRAHDNNSLAA------AYGXLRRTLD 448
+ H+ +++ Q+ N+ + A +G L+ TL+
Sbjct: 140 ALAHI-RNLPEQINLSVNDMIWAFGLSMPTWGSLKNTLN 177
[84][TOP]
>UniRef100_Q1J3M1 Diguanylate cyclase with GAF sensor n=1 Tax=Deinococcus
geothermalis DSM 11300 RepID=Q1J3M1_DEIGD
Length = 531
Score = 81.3 bits (199), Expect = 3e-14
Identities = 52/149 (34%), Positives = 72/149 (48%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+ P A++ D R + + A G + P SFC W++ D ++I + D R
Sbjct: 63 LLRTPVAVINFIDRDRQWGKSAVG-LEDTTAPRHDSFCAWSILQ--DTPLIIENTATDPR 119
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F NN MV G P V Y G PLI GHRIGTLC D +P A+ L +LA LVV
Sbjct: 120 FRNNPMVTGAPHVHMYAGAPLITPAGHRIGTLCVTDSQPHPLSAADIQALQDLAALVVSE 179
Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRRTLD 448
LE + + ++ A LRR+L+
Sbjct: 180 LELRARNRHLGLELDAQARLNADLRRSLE 208
[85][TOP]
>UniRef100_C1D402 Putative GAF/PAS/PAC domains-containing metal dependent
phosphohydrolase n=1 Tax=Deinococcus deserti VCD115
RepID=C1D402_DEIDV
Length = 608
Score = 81.3 bits (199), Expect = 3e-14
Identities = 46/123 (37%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+ AP AL+ L DDR + + G R + SFC T+ ++V+PD +D R
Sbjct: 28 LLNAPIALINLLDDRTQWTKGCYGMDLR-EMDRSLSFCQHTLGMNG--VLVVPDTTQDPR 84
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358
F + +V G +RFY G PLI +GHR+G+LC D PR C L +LA+ VV
Sbjct: 85 FSSLPLVTGDSAIRFYAGAPLITPDGHRVGSLCVLDTAPRIGLTEDECAFLQDLADSVVS 144
Query: 359 HLE 367
LE
Sbjct: 145 ELE 147
[86][TOP]
>UniRef100_A6WJQ9 Diguanylate cyclase n=1 Tax=Shewanella baltica OS185
RepID=A6WJQ9_SHEB8
Length = 323
Score = 81.3 bits (199), Expect = 3e-14
Identities = 46/121 (38%), Positives = 63/121 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF P +V L D R + + +G + + P SFCG A D I ++ DALKD R
Sbjct: 41 IFSLPICVVTLVDAERQWFKSRQG-LEVTETPREISFCGH--AINQDDIFIVNDALKDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PL +R+GTLC +PR+F A L +L E+V
Sbjct: 98 FSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPRDFTAEDIETLTDLGEMVEAE 157
Query: 362 L 364
L
Sbjct: 158 L 158
[87][TOP]
>UniRef100_A3D450 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella baltica
OS155 RepID=A3D450_SHEB5
Length = 321
Score = 81.3 bits (199), Expect = 3e-14
Identities = 55/155 (35%), Positives = 77/155 (49%), Gaps = 1/155 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P ALV+L D+ R + + G + SFCG + N +VI DA D R
Sbjct: 41 LFGVPIALVSLVDENRQWFKSCFG-LDVSETERSISFCGHAIL--NKSALVINDATLDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +RFY G PL +G +GTLC D PR+F +L NLA +V R
Sbjct: 98 FFDNPLVIGEPYIRFYAGQPLRTLSGQGLGTLCIIDQTPRDFSDEDITMLANLAGMVERE 157
Query: 362 LEKDIALQLRAHDN-NSLAAAYGXLRRTLDCFDHC 463
+ +A+QL D ++ G L T C + C
Sbjct: 158 I---MAVQLTISDELTKISNRRGFLTLTRYCLEVC 189
[88][TOP]
>UniRef100_C9PIE2 GGDEF domain protein n=1 Tax=Vibrio furnissii CIP 102972
RepID=C9PIE2_VIBFU
Length = 324
Score = 81.3 bits (199), Expect = 3e-14
Identities = 42/121 (34%), Positives = 68/121 (56%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P ALV L D++R + + + G + P SFCG + D+ +I +A+ D R
Sbjct: 41 LFDVPIALVTLVDEKRQWFKSSFG-LNVSETPRDISFCGHAILG--DEPFIINNAVADER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PL+ +G ++GTLC D +PR + + L +LA++ R
Sbjct: 98 FADNPLVTDNPHIRFYAGVPLVFQDGSKLGTLCIIDTEPRNLNHDEIIDLLDLAKMAERE 157
Query: 362 L 364
L
Sbjct: 158 L 158
[89][TOP]
>UniRef100_UPI0000383240 COG2202: FOG: PAS/PAC domain n=1 Tax=Magnetospirillum
magnetotacticum MS-1 RepID=UPI0000383240
Length = 397
Score = 80.9 bits (198), Expect = 4e-14
Identities = 49/126 (38%), Positives = 66/126 (52%), Gaps = 2/126 (1%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F AA V+L D R +++ G P SFC T+ D ++VIPDA +D R
Sbjct: 39 LFGVAAAYVSLVDAERQWLKACAGTMP-AQMPREGSFCSRTI--EQDAVLVIPDARRDPR 95
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVR- 358
F + +V G P V FY G PLI G R+G LC D +PR F + L +LAE+V
Sbjct: 96 FRDLGIVTGPPHVAFYAGAPLILRPGLRLGALCLVDPQPRTFTPADAEALRDLAEIVTAQ 155
Query: 359 -HLEKD 373
HL +D
Sbjct: 156 LHLRRD 161
[90][TOP]
>UniRef100_Q5X574 Putative uncharacterized protein n=1 Tax=Legionella pneumophila
str. Paris RepID=Q5X574_LEGPA
Length = 441
Score = 80.9 bits (198), Expect = 4e-14
Identities = 49/132 (37%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGA----FKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
P A ++ D + + + + G R D SFC +T+ + + M+IPDAL D R
Sbjct: 77 PIAFISFIDSKHQWFKSSCGIGLNKISRND-----SFCHYTI--QQSKPMIIPDALLDER 129
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
FCNN V P +RFY G PL +G +GTLC D KPR D + +L +LA L
Sbjct: 130 FCNNPYVTNSPNIRFYAGFPLSTVDGFNVGTLCAIDKKPRNLDETEIQILKDLATLAEDQ 189
Query: 362 LE-KDIALQLRA 394
+ DI+L RA
Sbjct: 190 VNLLDISLLERA 201
[91][TOP]
>UniRef100_Q21KX5 Sensor protein n=1 Tax=Saccharophagus degradans 2-40
RepID=Q21KX5_SACD2
Length = 401
Score = 80.9 bits (198), Expect = 4e-14
Identities = 54/161 (33%), Positives = 82/161 (50%), Gaps = 15/161 (9%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+ + P ALV+L D+RR + + +G + +FC A + V+ + L+D R
Sbjct: 41 VCDTPIALVSLVDERRQWFKSKQG-LTACETHRDLAFCAH--AIHDTAPFVVNNTLEDDR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +RFY G PLI +G+ +GTLC D +PR D ++ +L+ LA VV
Sbjct: 98 FADNPLVTGPPDIRFYAGVPLICPDGYALGTLCVIDTRPRSLDDTQLTILSALARQVVAQ 157
Query: 362 LE-------KDIALQLRA-------HD-NNSLAAAYGXLRR 439
LE ++A +RA HD NS A G +R
Sbjct: 158 LELRKQSTRLELANSIRARLITILTHDLRNSFQVAAGYAKR 198
[92][TOP]
>UniRef100_B0UA81 Putative phytochrome sensor protein n=1 Tax=Methylobacterium sp.
4-46 RepID=B0UA81_METS4
Length = 603
Score = 80.9 bits (198), Expect = 4e-14
Identities = 48/123 (39%), Positives = 69/123 (56%), Gaps = 4/123 (3%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQ----IMVIPDALKDAR 181
P A ++L D R + + A+ F + P S C +A+ + +V+PD L D+R
Sbjct: 478 PFAALSLVDRDRQWFK-AKAGFPFRETPRDASLCAHAVAASDGSGARLPLVVPDTLLDSR 536
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N V G P +RFY G PLI + GH IGTLC AD +PR DA +L LA+L +R
Sbjct: 537 FADNPAVVGPPYLRFYAGQPLILAQGHCIGTLCVADTRPRFLDADGETLLRWLADLALRE 596
Query: 362 LEK 370
+E+
Sbjct: 597 IER 599
[93][TOP]
>UniRef100_A9L2M2 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella baltica
OS195 RepID=A9L2M2_SHEB9
Length = 323
Score = 80.9 bits (198), Expect = 4e-14
Identities = 46/121 (38%), Positives = 63/121 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF P +V L D R + + +G + + P SFCG A I+++ DALKD R
Sbjct: 41 IFSLPTCVVTLVDAERQWFKSRQG-LEVTETPREISFCGH--AINQGDILIVNDALKDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PL +R+GTLC +PREF A L +L E+V
Sbjct: 98 FSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPREFTAEDIETLTDLGEMVEAE 157
Query: 362 L 364
L
Sbjct: 158 L 158
[94][TOP]
>UniRef100_A1U6X2 Sensor protein n=1 Tax=Marinobacter aquaeolei VT8
RepID=A1U6X2_MARAV
Length = 681
Score = 80.9 bits (198), Expect = 4e-14
Identities = 48/121 (39%), Positives = 65/121 (53%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
F+ P ALV+L D R + + G R + SFCG + + V+ DAL D RF
Sbjct: 42 FDVPIALVSLVDRERQWFKSCYGLGVR-ETGRDISFCGHAILK--SEAFVVSDALADERF 98
Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364
+N +V G P +RFY G PL +G RIGTLC D KPR F L +LA+++ R L
Sbjct: 99 SDNPLVTGEPHIRFYAGAPLEDRSGFRIGTLCIIDKKPRGFSNRDEKTLRDLADIIEREL 158
Query: 365 E 367
+
Sbjct: 159 Q 159
[95][TOP]
>UniRef100_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodiesterase (EAL), with
GAF and two PAS/PAC sensor domains n=1
Tax=Methylobacterium extorquens DM4 RepID=C7CCD7_METED
Length = 1028
Score = 80.9 bits (198), Expect = 4e-14
Identities = 46/122 (37%), Positives = 65/122 (53%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P A V+L D R + + G G P +FC + + S D ++V+ +A D R
Sbjct: 43 LFSVPIAFVSLVDSDRQWFKAKCGIAAEGT-PRDVAFCAYAILS--DDVLVVENAAVDPR 99
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F N +V G VRFY G PLI +G R+GT+C D KP F + L +LA +VV H
Sbjct: 100 FAINPLVVGDLAVRFYAGAPLILRSGIRVGTICIFDTKPCSFSEMQRTQLQDLARIVVAH 159
Query: 362 LE 367
+E
Sbjct: 160 IE 161
[96][TOP]
>UniRef100_C0N6E8 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010
RepID=C0N6E8_9GAMM
Length = 320
Score = 80.9 bits (198), Expect = 4e-14
Identities = 47/137 (34%), Positives = 73/137 (53%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F +LV+L D+ R + + A+G + P SFCG A D + +IPDAL+D R
Sbjct: 41 MFGVSISLVSLVDENRQWFKSAQG-IDASETPREISFCGH--AINQDGLFIIPDALEDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PL G +GTLC D +P+E D +L +L ++ +
Sbjct: 98 FYDNPLVTDAPNIRFYAGYPLKLRQGINLGTLCLIDGEPKELDEEDQQLLEDLGAMIEQE 157
Query: 362 LEKDIALQLRAHDNNSL 412
+ ++QL D +L
Sbjct: 158 IN---SIQLATLDELTL 171
[97][TOP]
>UniRef100_A4U3H0 Sensor protein n=1 Tax=Magnetospirillum gryphiswaldense
RepID=A4U3H0_9PROT
Length = 1382
Score = 80.9 bits (198), Expect = 4e-14
Identities = 47/127 (37%), Positives = 69/127 (54%), Gaps = 5/127 (3%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
F ALV+L D R + + +G + P SFCG + +++ V+ +A++ F
Sbjct: 42 FGVAIALVSLVDADRQWFKSCQG-IDASETPRNISFCGHAIL--REEVFVVTNAIEHPDF 98
Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLA-----EL 349
+N +V G P +RFY G PL A +G R+GTLC D KPR+F A VL +LA EL
Sbjct: 99 ADNPLVIGPPNIRFYAGAPLHAPDGERVGTLCVIDPKPRDFSAEDSDVLRDLANCVEGEL 158
Query: 350 VVRHLEK 370
+ H+ K
Sbjct: 159 SLTHIRK 165
[98][TOP]
>UniRef100_UPI0001693802 putative sensor protein n=1 Tax=Xanthomonas oryzae pv. oryzicola
BLS256 RepID=UPI0001693802
Length = 365
Score = 80.5 bits (197), Expect = 5e-14
Identities = 49/133 (36%), Positives = 67/133 (50%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P AL++L D R + + G + + P SFC + DQ+M + D D R
Sbjct: 68 LFRTPMALISLVDTHRQWFKSRIG-MQATETPRTLSFCAHAILEP-DQVMEVDDTHLDRR 125
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F N +V G P +RFY G PL+ S+G +GTLC D PR A+ L LA+ VV
Sbjct: 126 FVINALVTGEPQIRFYAGAPLLTSDGIALGTLCVLDRTPRRLSAAERDALQALAKQVVNT 185
Query: 362 LEKDIALQLRAHD 400
+E A QL D
Sbjct: 186 IELQQAAQLVQQD 198
[99][TOP]
>UniRef100_Q5WSQ0 Putative uncharacterized protein n=1 Tax=Legionella pneumophila
str. Lens RepID=Q5WSQ0_LEGPL
Length = 314
Score = 80.5 bits (197), Expect = 5e-14
Identities = 56/155 (36%), Positives = 80/155 (51%), Gaps = 1/155 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P A+++ + R +++ EG F + + SFCG + S D+IMVI DA KD R
Sbjct: 41 LFGIPIAVISFLEAERQWMKSTEG-FDIKEAKRKTSFCGHVILS--DEIMVIEDATKDKR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N V G P RFY G PL N + +G +C D KPR + S V+N+LA++V
Sbjct: 98 FHDNPFVLGKPYFRFYAGCPL-KINKYNVGVICLIDDKPRSINDSDKNVINDLAQMVEME 156
Query: 362 LEKDIALQLRAHDN-NSLAAAYGXLRRTLDCFDHC 463
LE +L L D L+ G L+ F C
Sbjct: 157 LE---SLHLSLTDELTGLSNRRGFLKLASYLFQKC 188
[100][TOP]
>UniRef100_A5IBY1 Adenylate cyclase PLUS two component hybrid sensor and regulator
n=1 Tax=Legionella pneumophila str. Corby
RepID=A5IBY1_LEGPC
Length = 441
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/116 (37%), Positives = 62/116 (53%), Gaps = 4/116 (3%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGA----FKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
P A ++ D + + + + G R D SFC +T+ + ++ M+IPDAL D R
Sbjct: 77 PIAFISFIDSKHQWFKSSCGIGLNKISRND-----SFCHYTI--QQNKPMIIPDALLDER 129
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAEL 349
FCNN V P +RFY G PL +G +GTLC D KPR D + +L +LA L
Sbjct: 130 FCNNPYVTNSPNIRFYAGFPLSTFDGFNVGTLCAIDKKPRNLDETEIQILKDLATL 185
[101][TOP]
>UniRef100_C9YAH7 Putative uncharacterized protein n=1 Tax=Curvibacter putative
symbiont of Hydra magnipapillata RepID=C9YAH7_9BURK
Length = 359
Score = 80.5 bits (197), Expect = 5e-14
Identities = 44/121 (36%), Positives = 68/121 (56%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I + P AL++L D+ R + + G + P +FC + D++M +PDAL+DAR
Sbjct: 40 ICDTPIALISLVDEDRQWFKARLG-LSAMETPRGQAFCAHAIVDP-DRVMEVPDALQDAR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G PG+RFY G PL+ +G +GT+C D PR+ + L L+ VV+
Sbjct: 98 FVDNPLVTGDPGIRFYAGAPLLTPSGAALGTVCVIDKVPRKLTERQSEALQALSRQVVQL 157
Query: 362 L 364
L
Sbjct: 158 L 158
[102][TOP]
>UniRef100_C5TBD5 Diguanylate cyclase with GAF sensor n=1 Tax=Acidovorax delafieldii
2AN RepID=C5TBD5_ACIDE
Length = 369
Score = 80.5 bits (197), Expect = 5e-14
Identities = 50/126 (39%), Positives = 69/126 (54%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I EAP ALV+ D R + + AE R + P S C + + SR + V+PD +DAR
Sbjct: 65 ICEAPIALVSFVDRERQWFK-AERGMGRRETPIDQSVCRFAIQSRG--VFVVPDLRQDAR 121
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V GVRFY G PL +G +GT+C D +PR + +LN LA V+R
Sbjct: 122 FASNPLVTQPHGVRFYAGAPLRTPDGFALGTVCVLDYQPRTLGQPQQDMLNVLAHQVMRL 181
Query: 362 LEKDIA 379
LE +A
Sbjct: 182 LELKLA 187
[103][TOP]
>UniRef100_A9HC88 Sensory box/GGDEF family protein, putative n=1 Tax=Roseobacter
litoralis Och 149 RepID=A9HC88_9RHOB
Length = 744
Score = 80.5 bits (197), Expect = 5e-14
Identities = 50/123 (40%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P LV+L D R + + A+ + SFC T A R + +MVIPDA KD R
Sbjct: 49 VFSVPIVLVSLIDLNRQWFK-AKVGLDLCETNLDVSFC--TYAVRQNDVMVIPDATKDIR 105
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358
F NNE+V+ G+RFY G PL ++G +GTLC D P +F + +L LA LVV
Sbjct: 106 FANNELVKAPDGIRFYAGAPLRTTDGFVVGTLCLVDGVPHLDFGSEDRALLAKLAVLVVD 165
Query: 359 HLE 367
+E
Sbjct: 166 LME 168
[104][TOP]
>UniRef100_A3YBC5 Diguanylate cyclase, putative n=1 Tax=Marinomonas sp. MED121
RepID=A3YBC5_9GAMM
Length = 324
Score = 80.5 bits (197), Expect = 5e-14
Identities = 47/121 (38%), Positives = 64/121 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P ALV+L D R + + +G + SFCG + D IP+AL+D R
Sbjct: 41 LFHVPIALVSLIDKDRQWFKSCDG-LPVTETGRDISFCGHAILG--DNTFYIPNALEDQR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F N +V G P +RFY G PL A+NG +IGTLC D +P+E + L LA V +
Sbjct: 98 FFYNPLVTGDPNIRFYAGHPLKAANGEKIGTLCIIDSEPKELNEEELNCLAELANTVEQE 157
Query: 362 L 364
L
Sbjct: 158 L 158
[105][TOP]
>UniRef100_A1ZNR6 Serine/threonine protein kinases n=1 Tax=Microscilla marina ATCC
23134 RepID=A1ZNR6_9SPHI
Length = 508
Score = 80.5 bits (197), Expect = 5e-14
Identities = 47/137 (34%), Positives = 72/137 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I EAP +L++L + + + + A+ + + P +FC + + N + VI DA KD R
Sbjct: 41 ICEAPISLISLVAENKQWFK-AKVGLEMQETPRSQAFCAHAIHTPN--LFVIEDATKDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PL G R+GTLC D KPR+ ++ L LA V+
Sbjct: 98 FWDNPLVTNSPDIRFYAGMPLTTPEGFRLGTLCVIDQKPRQLSLAQKQALQTLATQVITQ 157
Query: 362 LEKDIALQLRAHDNNSL 412
LE + L+ A + L
Sbjct: 158 LELRLKLKTVAAERQEL 174
[106][TOP]
>UniRef100_UPI0001AEC0D5 histidine kinase response regulator hybrid protein n=1
Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0D5
Length = 542
Score = 80.1 bits (196), Expect = 7e-14
Identities = 47/122 (38%), Positives = 65/122 (53%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I E P AL++L D R + + G + +FC + A + IP+A D R
Sbjct: 41 ICETPIALISLIDPNRQWFKSRVG-LDAEETSRDIAFC--SHAILQSDVFEIPNATLDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +RFY G PLI +GH IGTLC D KPR+ ++ L L++ VV H
Sbjct: 98 FHDNPLVTGAPDIRFYAGAPLITPSGHAIGTLCAIDSKPRKLTETQKSSLQTLSKSVVAH 157
Query: 362 LE 367
LE
Sbjct: 158 LE 159
[107][TOP]
>UniRef100_Q4KGS9 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas
fluorescens Pf-5 RepID=Q4KGS9_PSEF5
Length = 591
Score = 80.1 bits (196), Expect = 7e-14
Identities = 45/122 (36%), Positives = 67/122 (54%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
F+ P AL+ L D R + + G F P SFC +T+ S + + + +A +D RF
Sbjct: 40 FKVPTALITLVDRDRQWFKSRVG-FAPEQTPIEQSFCAYTIKSGD--VFEVENARQDVRF 96
Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364
N +V PG+ FY G PLI S GH IG+LC D +P+ +A+ L +LA LV+ +
Sbjct: 97 HANPLVTQDPGIGFYAGAPLITSTGHAIGSLCVIDRQPQRLNAAERQQLRDLASLVMEQV 156
Query: 365 EK 370
E+
Sbjct: 157 EQ 158
[108][TOP]
>UniRef100_Q1H3K2 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(S) n=1 Tax=Methylobacillus flagellatus KT
RepID=Q1H3K2_METFK
Length = 727
Score = 80.1 bits (196), Expect = 7e-14
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRW--SFCGWTMASRNDQIMVIPDALKD 175
+F+ P A + + +F + GA GD R SFC + N +MV+PD+ D
Sbjct: 41 MFDMPVAAINMIGSDHVFFAASIGA---GDVDMRRDVSFCAHAINQTN--VMVVPDSHLD 95
Query: 176 ARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVV 355
RF +N +V G + FY G PLI+ +GH +G LC D +PREF C L LA++ V
Sbjct: 96 ERFHDNPLVMGPANLSFYAGIPLISPDGHALGALCVIDSQPREFSEEDCERLRELAKMAV 155
Query: 356 RHLE 367
LE
Sbjct: 156 DRLE 159
[109][TOP]
>UniRef100_C5B219 Putative uncharacterized protein n=1 Tax=Methylobacterium
extorquens AM1 RepID=C5B219_METEA
Length = 279
Score = 80.1 bits (196), Expect = 7e-14
Identities = 45/117 (38%), Positives = 66/117 (56%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P AL++L D+ R + + G G P +FC +T+ +D + V+PDA A
Sbjct: 50 LFDVPIALISLLDEDRQWFKAKCGLHVSGT-PREQAFCNYTIL--HDSVFVVPDARAHAD 106
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
F N +V G P +RFY G PLI + G RIG+LC D K R F+ +L LA++V
Sbjct: 107 FALNPLVTGEPFIRFYAGAPLIVAPGTRIGSLCLIDRKLRAFNEEDSQLLARLAQVV 163
[110][TOP]
>UniRef100_C1F5G2 GAF domain/GGDEF domain protein n=1 Tax=Acidobacterium capsulatum
ATCC 51196 RepID=C1F5G2_ACIC5
Length = 369
Score = 80.1 bits (196), Expect = 7e-14
Identities = 42/122 (34%), Positives = 65/122 (53%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+ +AP A + L D+ R + + G + + P SFC +A +++ V+PDA KDAR
Sbjct: 40 VCDAPMATITLVDEDRQWFKSRIGITAQ-ETPRSVSFCAHAIAQ--NELFVVPDATKDAR 96
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F + +V P +RFY G P+++ G +GT+C D KPRE + V L LA V
Sbjct: 97 FSGSPLVLDDPNIRFYAGMPIVSPEGFHVGTMCVLDKKPRELTEEKQVALRVLARQVAAQ 156
Query: 362 LE 367
+
Sbjct: 157 FQ 158
[111][TOP]
>UniRef100_A9VXM6 GAF domain protein n=2 Tax=Methylobacterium extorquens group
RepID=A9VXM6_METEP
Length = 276
Score = 80.1 bits (196), Expect = 7e-14
Identities = 45/117 (38%), Positives = 66/117 (56%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P AL++L D+ R + + G G P +FC +T+ +D + V+PDA A
Sbjct: 47 LFDVPIALISLLDEDRQWFKAKCGLHVSGT-PREQAFCNYTIL--HDSVFVVPDARAHAD 103
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
F N +V G P +RFY G PLI + G RIG+LC D K R F+ +L LA++V
Sbjct: 104 FALNPLVTGEPFIRFYAGAPLIVAPGTRIGSLCLIDRKLRAFNEEDSQLLARLAQVV 160
[112][TOP]
>UniRef100_B4V775 Magnesium or manganese-dependent protein phosphatase (Fragment) n=1
Tax=Streptomyces sp. Mg1 RepID=B4V775_9ACTO
Length = 330
Score = 80.1 bits (196), Expect = 7e-14
Identities = 53/166 (31%), Positives = 76/166 (45%), Gaps = 18/166 (10%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P A V + D+ RI+ + A G + CG + S D+ +VIPD L D
Sbjct: 55 LFKVPVASVTIVDEDRIWFKAAHGLEGVNEISREPGLCGSAILS--DETLVIPDTLTDPV 112
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV--- 352
NN +V G GVRFY P+I +GHR+GT+ D +PR L +LA +V
Sbjct: 113 AFNNGLVAGPMGVRFYAAAPIITGDGHRLGTVNILDTRPRLITEDDTATLADLAAIVRDE 172
Query: 353 ---------------VRHLEKDIALQLRAHDNNSLAAAYGXLRRTL 445
R E++ A Q D N++ A L+RTL
Sbjct: 173 LEMRLAALNALRAEQERRREQEEARQRAEQDKNAIEAFASTLQRTL 218
[113][TOP]
>UniRef100_C7CHC2 Putative uncharacterized protein n=1 Tax=Methylobacterium
extorquens DM4 RepID=C7CHC2_METED
Length = 267
Score = 79.7 bits (195), Expect = 9e-14
Identities = 45/117 (38%), Positives = 66/117 (56%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P AL++L D+ R + + G G P +FC +T+ +D + V+PDA A
Sbjct: 38 LFDVPIALISLLDEDRQWFKAKCGLHVSGT-PREQAFCNYTIL--HDSVFVVPDARAHAD 94
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
F N +V G P +RFY G PLI + G RIG+LC D K R F+ +L LA++V
Sbjct: 95 FALNPLVTGEPFIRFYAGAPLIVAPGTRIGSLCLIDRKLRAFNEEDSRLLARLAQVV 151
[114][TOP]
>UniRef100_B4VUP4 Sensor protein n=1 Tax=Microcoleus chthonoplastes PCC 7420
RepID=B4VUP4_9CYAN
Length = 1038
Score = 79.7 bits (195), Expect = 9e-14
Identities = 42/122 (34%), Positives = 64/122 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I +AP AL++L D R + + G P +FC + + DQ++++P+AL D R
Sbjct: 93 ICDAPIALISLLDATRQWFKSKVG-IDATQTPKEQAFCAHAILNP-DQVLMVPNALDDER 150
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F N +V P +RFY GTPL+ +G +GTLC D PR+ + L L V+
Sbjct: 151 FAQNPLVTSEPNIRFYAGTPLVTPDGFALGTLCVIDQVPRQLTPEQIEALEALGRQVIAQ 210
Query: 362 LE 367
+E
Sbjct: 211 IE 212
[115][TOP]
>UniRef100_Q8PEJ1 Putative uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv.
citri RepID=Q8PEJ1_XANAC
Length = 575
Score = 79.3 bits (194), Expect = 1e-13
Identities = 41/119 (34%), Positives = 68/119 (57%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P ALV+L D+RR + + G + P +FC +T+ + D +M + DA D RF +N
Sbjct: 42 PIALVSLVDERRQWWKANIGLPGVSETPRELAFCTYTI--QGDAVMEVRDAPADPRFHDN 99
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEK 370
+V PG+R+Y G P++ +G R+GT+C D +PR + ++ L LA++ LE+
Sbjct: 100 ALVTDAPGIRYYAGAPIVLPDGLRMGTVCVIDQRPRALEPAQLQALQQLAKVAAEGLEQ 158
[116][TOP]
>UniRef100_Q8D4I0 FOG: GGDEF domain n=1 Tax=Vibrio vulnificus RepID=Q8D4I0_VIBVU
Length = 322
Score = 79.3 bits (194), Expect = 1e-13
Identities = 43/121 (35%), Positives = 67/121 (55%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P ALV+L D+ R + + G + P SFCG + + +++ DA +DAR
Sbjct: 41 LFDVPIALVSLVDEDRQWFKSCFG-LNASETPRDISFCGHAILGADT--LIVEDASQDAR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +RFY G PL+ + +GTLC D KPR + + L +LA++ R
Sbjct: 98 FADNPLVTGEPHIRFYAGVPLMFEHSSCLGTLCIIDTKPRTLNEDERLDLIDLAKMAERE 157
Query: 362 L 364
L
Sbjct: 158 L 158
[117][TOP]
>UniRef100_Q7MG14 GGDEF family protein n=1 Tax=Vibrio vulnificus YJ016
RepID=Q7MG14_VIBVY
Length = 322
Score = 79.3 bits (194), Expect = 1e-13
Identities = 43/121 (35%), Positives = 67/121 (55%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P ALV+L D+ R + + G + P SFCG + + +++ DA +DAR
Sbjct: 41 LFDVPIALVSLVDEDRQWFKSCFG-LNASETPRDISFCGHAILGADT--LIVEDASQDAR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +RFY G PL+ + +GTLC D KPR + + L +LA++ R
Sbjct: 98 FADNPLVTGEPHIRFYAGVPLMFEHSSCLGTLCIIDTKPRTLNEDERLDLIDLAKMAERE 157
Query: 362 L 364
L
Sbjct: 158 L 158
[118][TOP]
>UniRef100_Q055K2 Sensor protein n=1 Tax=Leptospira borgpetersenii serovar
Hardjo-bovis L550 RepID=Q055K2_LEPBL
Length = 564
Score = 79.3 bits (194), Expect = 1e-13
Identities = 43/122 (35%), Positives = 66/122 (54%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I ++P L++L D R++ + G G P SFC +T+ D+I I +AL D +
Sbjct: 46 ICDSPIVLISLIDTNRLWFKSKIGMNVSG-IPRDISFCQYTIIQ--DEIFEIENALNDEK 102
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F NN V G P +RFY GTPL G +GTLC D +P+ D+ + + L L+ ++ +
Sbjct: 103 FQNNPFVLGPPYIRFYAGTPLKTPEGFNVGTLCVFDTEPKRLDSRQKMTLKVLSNQIIAN 162
Query: 362 LE 367
E
Sbjct: 163 FE 164
[119][TOP]
>UniRef100_A3PPJ2 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides
ATCC 17029 RepID=A3PPJ2_RHOS1
Length = 325
Score = 79.3 bits (194), Expect = 1e-13
Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+ E P A V L D R + + G + P SFC T+ +R+ MV+PDA D R
Sbjct: 41 VLEVPYAAVTLIDADRQWFKSLVG-LSGSEGPRHESFCTHTIKTRDP--MVVPDATLDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F ++ +V G G+R Y G PL +G+ +G LC D PR F S+ ++ + A LV+
Sbjct: 98 FRDSPLVTGAAGIRSYLGVPLETPDGYNLGALCAVDTAPRTFSTSQIEIMKSFASLVLDE 157
Query: 362 LE-KDIAL 382
LE + IAL
Sbjct: 158 LELRQIAL 165
[120][TOP]
>UniRef100_B5HZB9 Magnesium or manganese-dependent protein phosphatase n=1
Tax=Streptomyces sviceus ATCC 29083 RepID=B5HZB9_9ACTO
Length = 462
Score = 79.3 bits (194), Expect = 1e-13
Identities = 45/122 (36%), Positives = 62/122 (50%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+FE P A V + D+ RI+ + A G + C A D VIPD L D
Sbjct: 25 LFEVPVATVTIVDEDRIWFKAAHGLEGVSEIGRDPGLCA--SAVLTDDTTVIPDTLLDPV 82
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
C+N +V G GVRFY P+I ++GHR+GT+ D +PRE + L +LA +V
Sbjct: 83 ACSNPLVAGPMGVRFYAAAPIITADGHRLGTVNILDTRPREISEADASTLTDLAAVVRDQ 142
Query: 362 LE 367
LE
Sbjct: 143 LE 144
[121][TOP]
>UniRef100_A3XLZ5 Sensor protein n=1 Tax=Leeuwenhoekiella blandensis MED217
RepID=A3XLZ5_9FLAO
Length = 415
Score = 79.3 bits (194), Expect = 1e-13
Identities = 52/139 (37%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P AL+ + D R F++ G + P SFC + + +D I +IPDA +D RF NN
Sbjct: 41 PIALITMLDYNRNFLKSHYGV-PFNESPREISFCTHAIQT-HDPIFIIPDAREDERFKNN 98
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE-- 367
+V G FY G PL+ GH +GTLC D +PRE D ++ L LA VV E
Sbjct: 99 PLVTGDTKAIFYAGVPLVDKGGHALGTLCVFDHEPRELDENQISTLIALAHQVVNLFELR 158
Query: 368 ----KDIALQLRAHDNNSL 412
++ ALQ NSL
Sbjct: 159 RQNIENKALQENLLKKNSL 177
[122][TOP]
>UniRef100_A3UFL0 GAF sensor diguanylate cyclase n=1 Tax=Oceanicaulis alexandrii
HTCC2633 RepID=A3UFL0_9RHOB
Length = 341
Score = 79.3 bits (194), Expect = 1e-13
Identities = 45/122 (36%), Positives = 66/122 (54%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I E P V+L D R + + G + +FC + A ++ MV+PDA +D R
Sbjct: 45 ILEVPICAVSLVDADRQWFKAKRG-LAVCETERDIAFCSY--AIEQEEPMVVPDATEDPR 101
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F N +V G P +R Y G PL++ +G+++GTLC DV+PR+F +L A LVV
Sbjct: 102 FSANPLVTGDPHLRAYVGVPLVSPDGYQVGTLCAMDVRPRDFSDHELKILRKFARLVVDE 161
Query: 362 LE 367
LE
Sbjct: 162 LE 163
[123][TOP]
>UniRef100_Q3IWG8 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides
2.4.1 RepID=Q3IWG8_RHOS4
Length = 326
Score = 79.0 bits (193), Expect = 2e-13
Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+ E P A V L D R + + G + P SFC T+ +R+ M++PDA D R
Sbjct: 42 VLEVPYAAVTLIDADRQWFKSLVG-LSGSEGPRHESFCTHTIKTRDP--MIVPDATLDPR 98
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F ++ +V G G+R Y G PL +G+ +G LC D PR F S+ ++ + A LV+
Sbjct: 99 FRDSPLVTGAAGIRSYLGVPLETPDGYNLGALCAVDTAPRTFSTSQIEIMKSFASLVLDE 158
Query: 362 LE-KDIAL 382
LE + IAL
Sbjct: 159 LELRQIAL 166
[124][TOP]
>UniRef100_B9KU13 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides
KD131 RepID=B9KU13_RHOSK
Length = 326
Score = 79.0 bits (193), Expect = 2e-13
Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 1/128 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+ E P A V L D R + + G + P SFC T+ +R+ M++PDA D R
Sbjct: 42 VLEVPYAAVTLIDADRQWFKSLVG-LSGSEGPRHESFCTHTIKTRDP--MIVPDATLDPR 98
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F ++ +V G G+R Y G PL +G+ +G LC D PR F S+ ++ + A LV+
Sbjct: 99 FRDSPLVTGAAGIRSYLGVPLETPDGYNLGALCAVDTAPRTFSTSQIEIMKSFASLVLDE 158
Query: 362 LE-KDIAL 382
LE + IAL
Sbjct: 159 LELRQIAL 166
[125][TOP]
>UniRef100_B2JC03 Sensor protein n=1 Tax=Nostoc punctiforme PCC 73102
RepID=B2JC03_NOSP7
Length = 1297
Score = 79.0 bits (193), Expect = 2e-13
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P L++L D+ R + + G F + P + C + + + D+ ++IPDA D R
Sbjct: 49 LFNMPTVLISLVDESRAWFKSCVG-FDAREVPRDDTLCNFAVLT--DEPLIIPDARLDDR 105
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358
F N V+ PGVRFY G PL++ +G +GTLC D +P + + L +LA +VV
Sbjct: 106 FACNPFVQSEPGVRFYAGAPLLSQDGFNLGTLCLLDSQPHDPLSVEQQATLVDLAAIVVD 165
Query: 359 HLEKDIALQLRAHDNNSLAAA 421
LE L+L +H + AA
Sbjct: 166 ELE----LRLASHKIAQVDAA 182
[126][TOP]
>UniRef100_B0SII8 Sensor protein n=2 Tax=Leptospira biflexa serovar Patoc
RepID=B0SII8_LEPBA
Length = 553
Score = 79.0 bits (193), Expect = 2e-13
Identities = 46/122 (37%), Positives = 67/122 (54%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I AP +LV+L D+ R + + G K + P +FC + A D++ +IP+A D R
Sbjct: 41 ICHAPISLVSLIDETRQWFKSHHG-LKARETPRSLAFC--SHAILGDELFIIPNAKSDNR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F NN +V G P V FY G PL + ++GTLC D KPRE + + +L L + VR
Sbjct: 98 FKNNPLVNGDPNVIFYAGIPLALDDQIKLGTLCVIDNKPRELNEEQMQMLRLLGKQTVRL 157
Query: 362 LE 367
L+
Sbjct: 158 LQ 159
[127][TOP]
>UniRef100_A8ILU5 Putative signaling protein n=1 Tax=Azorhizobium caulinodans ORS 571
RepID=A8ILU5_AZOC5
Length = 804
Score = 79.0 bits (193), Expect = 2e-13
Identities = 49/123 (39%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P LV+L R F + + G F + SFC A D+I+VIPDA +D R
Sbjct: 107 VFDVPIVLVSLLGRDRQFFKASVG-FPVCETSREVSFCAH--AIMQDEILVIPDATRDPR 163
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358
F N +V G P +RFY G PLIA G ++GT+C D +PR F + LN+LA + V
Sbjct: 164 FRANPLVLGPPFIRFYAGRPLIAPTGEKVGTVCLIDHEPRFRFTETDRHNLNDLAAMAVD 223
Query: 359 HLE 367
+E
Sbjct: 224 RME 226
[128][TOP]
>UniRef100_A3SZS5 Sensor protein n=1 Tax=Sulfitobacter sp. NAS-14.1
RepID=A3SZS5_9RHOB
Length = 422
Score = 79.0 bits (193), Expect = 2e-13
Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+ + P A +++ ++ + + G P FC T+ S D M++PD KDAR
Sbjct: 41 LLDCPIAHISVVEEDSQWYKSVVG-MHLDPMPKDTGFCAHTIMS--DAPMIVPDLSKDAR 97
Query: 182 FCNNEMV-RGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVV 355
F + MV +GGP R+Y G PLI S+GHR G+LC D+KP E+ + + + +L +L +VV
Sbjct: 98 FERHPMVAKGGPEARYYAGVPLILSSGHRFGSLCALDLKPHEYPSEKQIALLTDLGRIVV 157
Query: 356 RHLEK 370
LE+
Sbjct: 158 AALER 162
[129][TOP]
>UniRef100_A3SE26 Sensor protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SE26_9RHOB
Length = 422
Score = 79.0 bits (193), Expect = 2e-13
Identities = 45/125 (36%), Positives = 71/125 (56%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+ + P A +++ ++ + + G P FC T+ S D M++PD KDAR
Sbjct: 41 LLDCPIAHISVVEEDSQWYKSVVG-MHLDPMPKDTGFCAHTIMS--DAPMIVPDLSKDAR 97
Query: 182 FCNNEMV-RGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVV 355
F + MV +GGP R+Y G PLI S+GHR G+LC D+KP E+ + + + +L +L +VV
Sbjct: 98 FERHPMVAKGGPEARYYAGVPLILSSGHRFGSLCALDLKPHEYPSEKQIALLTDLGRIVV 157
Query: 356 RHLEK 370
LE+
Sbjct: 158 AALER 162
[130][TOP]
>UniRef100_Q5WWB5 Putative uncharacterized protein n=1 Tax=Legionella pneumophila
str. Lens RepID=Q5WWB5_LEGPL
Length = 431
Score = 78.6 bits (192), Expect = 2e-13
Identities = 49/132 (37%), Positives = 68/132 (51%), Gaps = 5/132 (3%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGA----FKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
P A ++ D + + + + G R D SFC +T+ + ++ M+I DAL D R
Sbjct: 67 PIAFISFIDSKHQWFKSSCGIGLNKISRND-----SFCHYTI--QQNKPMIISDALLDER 119
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
FCNN V P +RFY G PL +G IGTLC D KPR D + +L +LA L
Sbjct: 120 FCNNPYVTNSPNIRFYAGFPLSTVDGFNIGTLCAIDKKPRNLDETEIQILKDLATLAEDQ 179
Query: 362 LE-KDIALQLRA 394
+ DI+L RA
Sbjct: 180 VNLLDISLLERA 191
[131][TOP]
>UniRef100_C1D2J4 Putative Diguanylate cyclase (GGDEF domain) with GAF sensor n=1
Tax=Deinococcus deserti VCD115 RepID=C1D2J4_DEIDV
Length = 508
Score = 78.6 bits (192), Expect = 2e-13
Identities = 45/120 (37%), Positives = 64/120 (53%)
Frame = +2
Query: 44 RRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEMVRGGPGVR 223
R+ + D E R D SFC WT+ S D ++ + DA +D RF + ++V G P +R
Sbjct: 59 RKSWFGDGETNCSRED-----SFCAWTILS--DDVLAVSDAREDPRFHDYKLVVGDPNIR 111
Query: 224 FYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKDIALQLRAHDN 403
Y G PL+ +GHRIG+LC + RE D L +LA LV+ LE LR H++
Sbjct: 112 MYAGAPLVTPSGHRIGSLCVFSAEARELDLDDQATLRDLAALVMDELE------LRLHNH 165
[132][TOP]
>UniRef100_A6SWK6 Diguanylate cyclase n=1 Tax=Janthinobacterium sp. Marseille
RepID=A6SWK6_JANMA
Length = 320
Score = 78.6 bits (192), Expect = 2e-13
Identities = 44/121 (36%), Positives = 61/121 (50%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P A V L ++ G ++ SFC + A +D+IM+IPD L D R
Sbjct: 41 VFNVPIAKVTLVGPEMVYTVSCAGE-QQAPIQRDLSFC--SHAIHSDEIMIIPDTLDDGR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N V P +RFY G PL+ NG R+GTLC D PR+ ++L +LA V
Sbjct: 98 FADNPFVVEDPRIRFYAGCPLVVMNGCRLGTLCLVDKVPRKMTQEDIILLKDLAATVEHE 157
Query: 362 L 364
L
Sbjct: 158 L 158
[133][TOP]
>UniRef100_A1WZ01 Sensor protein n=1 Tax=Halorhodospira halophila SL1
RepID=A1WZ01_HALHL
Length = 680
Score = 78.6 bits (192), Expect = 2e-13
Identities = 45/122 (36%), Positives = 64/122 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I++ P A V D R + + A+G + + P SFCG +A N +V+ D +D R
Sbjct: 41 IYQVPIATVTFVDRDRQWFKSAQG-LEDCETPRSTSFCGHVVADGNP--LVVEDTHQDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PLI G IG LC D +PR F + L +LA L++
Sbjct: 98 FHDNPLVTSPPHIRFYAGVPLITPAGQPIGVLCIQDRQPRRFSDEDLIPLQDLAVLLISE 157
Query: 362 LE 367
LE
Sbjct: 158 LE 159
[134][TOP]
>UniRef100_Q3AWZ6 GAF n=1 Tax=Synechococcus sp. CC9902 RepID=Q3AWZ6_SYNS9
Length = 245
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/120 (36%), Positives = 63/120 (52%)
Frame = +2
Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
+ P AL++L D R + + G + WSFC + S + ++I DAL+D RF
Sbjct: 43 DTPIALLSLVDTNRQWFKSKVGVDVE-ETVRDWSFCAHAIHS--PEPLIIEDALQDERFV 99
Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+N +V+G P +R Y G PL HRIGTLC D KP +C ++ +LA V LE
Sbjct: 100 DNPLVKGDPQIRLYAGFPLQNDQNHRIGTLCVIDRKPHGLTDVQCEIMESLARQAVSFLE 159
[135][TOP]
>UniRef100_Q13PE1 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1
Tax=Burkholderia xenovorans LB400 RepID=Q13PE1_BURXL
Length = 728
Score = 78.2 bits (191), Expect = 3e-13
Identities = 51/123 (41%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF P AL++L + R + G + SFC A R D IM+IPDA DAR
Sbjct: 41 IFSVPIALISLVETERQLFAASVG-LDVCETSRDVSFCAH--AIRGDDIMIIPDARVDAR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358
F +N +V G P +RFY G PL ++GH +GTLC +PRE F L +LA LV+
Sbjct: 98 FHDNPLVTGAPFIRFYAGAPLRTASGHALGTLCIIGHRPRENFGEQDRRNLRDLAALVLD 157
Query: 359 HLE 367
LE
Sbjct: 158 KLE 160
[136][TOP]
>UniRef100_Q09CZ9 Sensor protein n=1 Tax=Stigmatella aurantiaca DW4/3-1
RepID=Q09CZ9_STIAU
Length = 729
Score = 78.2 bits (191), Expect = 3e-13
Identities = 45/118 (38%), Positives = 63/118 (53%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P A ++L D+ R + + + G + + P SFC T A + ++ V+PDA DARF +N
Sbjct: 85 PTAFISLTDETRQWFKASTGVNEALEVPRDDSFC--TYAIQQKELFVVPDAALDARFRDN 142
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
V GGP +RFY PL+ G +GT+C D PRE + L LA VV LE
Sbjct: 143 PYVAGGPRIRFYAAAPLVTQEGFVLGTVCAIDRMPRELTPQQGRSLEALAGQVVSLLE 200
[137][TOP]
>UniRef100_C0N9M8 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010
RepID=C0N9M8_9GAMM
Length = 318
Score = 78.2 bits (191), Expect = 3e-13
Identities = 48/133 (36%), Positives = 70/133 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF+ P +LV+L D+ R + + G + + SFCG + D+ VI D D+R
Sbjct: 41 IFDVPISLVSLVDENRQWFKSCYGISAK-ETGRDVSFCGHAILG--DEAFVIEDTHLDSR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +RFY G P+ + +GTLC D +PR F ++L LAELV R
Sbjct: 98 FVDNPLVVGEPHIRFYAGYPIRHVDNFILGTLCLIDTRPRHFSHREQLILQGLAELVERE 157
Query: 362 LEKDIALQLRAHD 400
+ A+QL D
Sbjct: 158 IH---AIQLATMD 167
[138][TOP]
>UniRef100_B4WNN7 GAF domain protein n=1 Tax=Synechococcus sp. PCC 7335
RepID=B4WNN7_9SYNE
Length = 242
Score = 78.2 bits (191), Expect = 3e-13
Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I + P AL++L D R + + G R + P SFC + +++ I ++ DA DAR
Sbjct: 40 ICDVPIALISLVDKDRQWFKSKVGISVR-ETPRDVSFCAHAILTKD--ITIVKDARDDAR 96
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PLI ++GH +GTLC D +P+E + L LA +V
Sbjct: 97 FSDNPLVTCAPNIRFYAGVPLITASGHPLGTLCVIDHQPKELSEVQRRTLIALARQIVVQ 156
Query: 362 LE-KDIALQL 388
LE ++LQL
Sbjct: 157 LELHRVSLQL 166
[139][TOP]
>UniRef100_A3JAN2 Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain
n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAN2_9ALTE
Length = 319
Score = 78.2 bits (191), Expect = 3e-13
Identities = 46/137 (33%), Positives = 74/137 (54%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F +LV+L D+ R + + ++G + + P SFCG A + + +IPDA++D R
Sbjct: 41 MFGVSVSLVSLVDEDRQWFKSSQG-LEATETPRDISFCGH--AINQNGLFIIPDAIEDVR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PL G +IGTLC D KPR D + +L +V +
Sbjct: 98 FADNPLVTDAPNIRFYAGYPLEIREGLKIGTLCLIDQKPRVMDEEDQQLFKDLGAMVEQE 157
Query: 362 LEKDIALQLRAHDNNSL 412
++ ++QL D +L
Sbjct: 158 IK---SIQLATLDELTL 171
[140][TOP]
>UniRef100_B8CFN0 Predicted protein (Fragment) n=1 Tax=Thalassiosira pseudonana
CCMP1335 RepID=B8CFN0_THAPS
Length = 165
Score = 78.2 bits (191), Expect = 3e-13
Identities = 40/101 (39%), Positives = 55/101 (54%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IFE P LV+L D R + G + + SFC + S ND + ++PD D R
Sbjct: 34 IFEVPICLVSLVDIGRQWFMSNRGLGDVRETSRQVSFCAHAILSSND-VFIVPDTHLDPR 92
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE 304
F +N +V G P +RFY G PL++ G ++GT C D KPRE
Sbjct: 93 FISNGLVTGPPFIRFYAGVPLVSPEGFKLGTFCIIDTKPRE 133
[141][TOP]
>UniRef100_Q2NYT0 Histidine kinase-response regulator hybrid protein n=2
Tax=Xanthomonas oryzae pv. oryzae RepID=Q2NYT0_XANOM
Length = 874
Score = 77.8 bits (190), Expect = 3e-13
Identities = 48/119 (40%), Positives = 61/119 (51%)
Frame = +2
Query: 11 APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190
AP ALV+L D R + + G+ G P SFC + A ++M +PDA D RF N
Sbjct: 48 APVALVSLLDADRQWFKARCGSDLEGT-PRSASFC--SHAIMGTELMEVPDAEADPRFVN 104
Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
N +V G PGVR Y G PLI G+ GTLC +PR D + L LA + LE
Sbjct: 105 NPLVVGAPGVRSYVGVPLIGREGYAYGTLCTLSTRPRVLDEQQKQALIRLARQAAKQLE 163
[142][TOP]
>UniRef100_C6WVC8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1
Tax=Methylotenera mobilis JLW8 RepID=C6WVC8_METML
Length = 737
Score = 77.8 bits (190), Expect = 3e-13
Identities = 46/128 (35%), Positives = 65/128 (50%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I + P A++ L D+ R + + G + P SFCG + + I IP+AL D R
Sbjct: 41 ICKTPIAIITLLDESRQWFKSKVG-LTATETPREISFCGHAILGND--IFEIPNALDDDR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +RFY G PL++S + +GTLC D K RE + L L LV
Sbjct: 98 FIDNPLVTGNPNIRFYAGIPLVSSVNYALGTLCVIDQKARELSEEQRHSLKKLGRLVEAL 157
Query: 362 LEKDIALQ 385
+E I Q
Sbjct: 158 IEARIQYQ 165
[143][TOP]
>UniRef100_B2SMT3 Putative signal protein with GAF,PAS(PAC) and GGDEF domains n=1
Tax=Xanthomonas oryzae pv. oryzae PXO99A
RepID=B2SMT3_XANOP
Length = 874
Score = 77.8 bits (190), Expect = 3e-13
Identities = 48/119 (40%), Positives = 61/119 (51%)
Frame = +2
Query: 11 APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190
AP ALV+L D R + + G+ G P SFC + A ++M +PDA D RF N
Sbjct: 48 APVALVSLLDADRQWFKARCGSDLEGT-PRSASFC--SHAIMGTELMEVPDAEADPRFVN 104
Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
N +V G PGVR Y G PLI G+ GTLC +PR D + L LA + LE
Sbjct: 105 NPLVVGAPGVRSYVGVPLIGREGYAYGTLCTLSTRPRVLDEQQKQALIRLARQAAKQLE 163
[144][TOP]
>UniRef100_B2J3P7 Diguanylate cyclase with GAF sensor n=1 Tax=Nostoc punctiforme PCC
73102 RepID=B2J3P7_NOSP7
Length = 406
Score = 77.8 bits (190), Expect = 3e-13
Identities = 43/122 (35%), Positives = 63/122 (51%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I + P AL++L D R + + G K + P +FC + + I+VIP+A+KD R
Sbjct: 107 ICKTPIALISLVDADRQWFKSNIG-LKVRETPRESAFCSHAIL-HPENILVIPNAMKDDR 164
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F NN +V+ +RFY G PL+ NG IGTLC D PR+ + L L +
Sbjct: 165 FANNPLVKSNSKIRFYAGAPLVTPNGFPIGTLCVMDTVPRQLSYQQLDALRRLTRQAIAQ 224
Query: 362 LE 367
+E
Sbjct: 225 ME 226
[145][TOP]
>UniRef100_A8ICL8 Putative signal transduction protein n=1 Tax=Azorhizobium
caulinodans ORS 571 RepID=A8ICL8_AZOC5
Length = 611
Score = 77.8 bits (190), Expect = 3e-13
Identities = 46/123 (37%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P A V + +F + G F D SFC T+ ++MV+PDA +D R
Sbjct: 41 VFKVPMAAVNMIGSDHVFFAASAG-FGAVDKRREVSFCAHTILQ--GKVMVVPDAEQDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358
F +N +V G G+RFY G PL++ +GH IG LC D PR F + L+ LA +V+
Sbjct: 98 FHDNPLVTGAAGIRFYAGAPLLSGDGHAIGALCILDTFPRVGFASEERERLSQLAHVVMD 157
Query: 359 HLE 367
LE
Sbjct: 158 RLE 160
[146][TOP]
>UniRef100_A0L3B2 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella sp. ANA-3
RepID=A0L3B2_SHESA
Length = 325
Score = 77.8 bits (190), Expect = 3e-13
Identities = 54/147 (36%), Positives = 76/147 (51%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I +AP A+V DD ++ + A+ R + SFC + M + D +MV+PDA D R
Sbjct: 35 ICDAPVAMVTRTDDTKLNLI-AKVGISRTSVLIKESFCVYAMETP-DAVMVVPDATLDHR 92
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F N MV GPG RFY G+PLI G IGT+C D P++ + + L L+ V+
Sbjct: 93 FSTNAMVISGPGYRFYAGSPLIDPEGAVIGTICVYDHVPKQLNQRQISSLQALSRQVIAI 152
Query: 362 LE-KDIALQLRAHDNNSLAAAYGXLRR 439
LE K + QL H+ + A G R
Sbjct: 153 LELKKVGEQL--HNTSMTDALTGVNNR 177
[147][TOP]
>UniRef100_C8QG55 Diguanylate cyclase with GAF sensor n=1 Tax=Pantoea sp. At-9b
RepID=C8QG55_9ENTR
Length = 322
Score = 77.8 bits (190), Expect = 3e-13
Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 1/134 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDF-PWRWSFCGWTMASRNDQIMVIPDALKDA 178
+F P ALV+L ++ + + G + G+ P SFCG + D +MV+ +AL D
Sbjct: 41 LFGVPIALVSLLEEDHQWFKSIAG--QSGETAPRNTSFCGHAILQ--DDVMVVENALDDD 96
Query: 179 RFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVR 358
RF +N +V G VRFY G PL G ++GTLC D + R FDA C L +LA +
Sbjct: 97 RFYDNPLVTGENPVRFYAGCPLRTPAGAKVGTLCIVDHQARSFDADDCHTLRDLAAMAEA 156
Query: 359 HLEKDIALQLRAHD 400
L IA Q D
Sbjct: 157 EL---IAFQTATSD 167
[148][TOP]
>UniRef100_B9R099 Putative uncharacterized protein n=1 Tax=Labrenzia alexandrii
DFL-11 RepID=B9R099_9RHOB
Length = 877
Score = 77.8 bits (190), Expect = 3e-13
Identities = 51/151 (33%), Positives = 76/151 (50%), Gaps = 7/151 (4%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF+ P AL++L D+R + + A G G S C +++ D + V+PD L D R
Sbjct: 44 IFDCPIALISLVDERDQWFKAACGVDIEGTSR-EVSICQHALSA--DDLFVVPDTLSDER 100
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV--- 352
FC+N +V G P +RFY G PL +R+GTLC D +PR+ + L + +V
Sbjct: 101 FCDNPLVMGEPNIRFYAGCPLSLDGKNRLGTLCVIDQRPRKPARQQLHQLRRMGRVVEGL 160
Query: 353 ----VRHLEKDIALQLRAHDNNSLAAAYGXL 433
++EK+ AL RA + A G L
Sbjct: 161 LKSHQANVEKEAAL-ARAEAEHEEAVGKGRL 190
[149][TOP]
>UniRef100_A6EQZ6 Sensor protein n=1 Tax=unidentified eubacterium SCB49
RepID=A6EQZ6_9BACT
Length = 398
Score = 77.8 bits (190), Expect = 3e-13
Identities = 49/122 (40%), Positives = 67/122 (54%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I E P +L+ L D R F + G + + P SFCG + D I +I DA DAR
Sbjct: 41 ICELPISLITLLDSDRNFFKSHHGIDIQ-ESPRDISFCGHAINQEED-IFIINDARLDAR 98
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V+ + FY G PLI +G ++GTLC D KPRE S+ VL N+A+ VV+
Sbjct: 99 FKDNPLVKESQAI-FYAGAPLINPDGLKLGTLCVFDTKPRELTESQIKVLINMAKQVVKL 157
Query: 362 LE 367
E
Sbjct: 158 FE 159
[150][TOP]
>UniRef100_A3KHX9 Putative magnesium or manganese-dependent protein phosphatase n=1
Tax=Streptomyces ambofaciens ATCC 23877
RepID=A3KHX9_STRAM
Length = 493
Score = 77.8 bits (190), Expect = 3e-13
Identities = 44/122 (36%), Positives = 60/122 (49%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P A V + D RI+ + A G + CG A D MVIPD LKD
Sbjct: 55 LFDVPVATVTIVDTDRIWFKAAHGLEGVAEIGRDPGLCG--SAILRDDTMVIPDTLKDPV 112
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
+N +V G GVRFY P+I GHR+GT+ D +PR L +LA +V+
Sbjct: 113 AADNPLVAGDMGVRFYAAAPIITPEGHRLGTVNVLDTRPRSITEEDTATLADLAAIVLDE 172
Query: 362 LE 367
+E
Sbjct: 173 ME 174
[151][TOP]
>UniRef100_A0JRC3 Serine/threonine protein kinase n=1 Tax=Arthrobacter sp. FB24
RepID=A0JRC3_ARTS2
Length = 471
Score = 77.4 bits (189), Expect = 5e-13
Identities = 47/140 (33%), Positives = 74/140 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P A+V++ D RI+ + G + G+ C A D++ V+PDA+ D R
Sbjct: 340 MFSVPVAIVSVVDHDRIWFKAHHGT-EVGEIGRDPGLCA--SAILQDEVWVVPDAVTDPR 396
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
N +V G G++FY G PL +G+ +GT+C D +PREF A L +LA +V+
Sbjct: 397 TLANPLVAGEFGLQFYAGVPLRTPDGYNLGTICILDRQPREFTAEDSRALEDLAAIVMND 456
Query: 362 LEKDIALQLRAHDNNSLAAA 421
LE LR +++A+A
Sbjct: 457 LE------LRLQSRSAVASA 470
[152][TOP]
>UniRef100_Q060H4 GAF n=1 Tax=Synechococcus sp. BL107 RepID=Q060H4_9SYNE
Length = 253
Score = 77.4 bits (189), Expect = 5e-13
Identities = 44/120 (36%), Positives = 63/120 (52%)
Frame = +2
Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
+ P AL++L D R + + G + WSFC + S + ++I DAL+D RF
Sbjct: 43 DTPIALLSLVDTNRQWFKSKVGVDVE-ETVRDWSFCAHAIHS--PEPLIIEDALQDERFV 99
Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+N +V+G P +R Y G PL HRIGTLC D KP +C ++ +LA V LE
Sbjct: 100 DNPLVQGEPQIRLYAGFPLQNDQNHRIGTLCVIDRKPHGLTDVQCKIMESLARQAVSFLE 159
[153][TOP]
>UniRef100_A3ETZ5 Diguanylate cyclase with GAF sensor n=1 Tax=Leptospirillum rubarum
RepID=A3ETZ5_9BACT
Length = 322
Score = 77.4 bits (189), Expect = 5e-13
Identities = 44/116 (37%), Positives = 60/116 (51%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P ALV L D R + + G G+ P SFCG + + +IPDA +D R
Sbjct: 41 LFNVPIALVTLVDKDRQWFKSNMG-LSVGETPRSVSFCGHAILQ--EDFFIIPDAREDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAEL 349
F +N +V G P +RFY G L + +IGTLC D KPR + +VL +L L
Sbjct: 98 FSDNPLVLGDPRIRFYAGCVLRTRDNQKIGTLCLIDHKPRTMETQDLLVLEDLTAL 153
[154][TOP]
>UniRef100_B8IM22 Putative phytochrome sensor protein n=1 Tax=Methylobacterium
nodulans ORS 2060 RepID=B8IM22_METNO
Length = 607
Score = 77.0 bits (188), Expect = 6e-13
Identities = 47/124 (37%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRND----QIMVIPDALK 172
F P A ++L D R + + + G R + P S C +A+ + +V+PD L
Sbjct: 475 FAVPFAALSLVDSDRQWFKASHGLTFR-EVPRDASLCAHAVAASDGGGCRDPLVVPDTLL 533
Query: 173 DARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
DARF ++ V G P +RFY G PLI ++GH IGTLC AD +PR D L LAEL
Sbjct: 534 DARFADSPAVVGPPHLRFYAGQPLILADGHCIGTLCIADTRPRVLDPEEERRLRWLAELA 593
Query: 353 VRHL 364
+ +
Sbjct: 594 LNEI 597
[155][TOP]
>UniRef100_B7KWZ8 Sensor protein n=1 Tax=Methylobacterium chloromethanicum CM4
RepID=B7KWZ8_METC4
Length = 1125
Score = 77.0 bits (188), Expect = 6e-13
Identities = 44/121 (36%), Positives = 65/121 (53%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F A ++L D R +++ G SFC T+A D ++V+PDA +D R
Sbjct: 39 LFGVAIAYISLVDAERQWLKACVGIMPT-QTSRAGSFCDRTIAQ--DAMLVVPDARRDPR 95
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F + E+V G P + FY G PLI G R+G+LC AD +PR+F L +LAE+V
Sbjct: 96 FSSLEIVTGPPHIVFYAGAPLILRPGVRLGSLCLADSQPRDFTPEDAAALRDLAEIVTAQ 155
Query: 362 L 364
+
Sbjct: 156 M 156
[156][TOP]
>UniRef100_A9VWI8 Diguanylate cyclase n=1 Tax=Methylobacterium extorquens PA1
RepID=A9VWI8_METEP
Length = 1428
Score = 77.0 bits (188), Expect = 6e-13
Identities = 38/86 (44%), Positives = 54/86 (62%)
Frame = +2
Query: 107 SFCGWTMASRNDQIMVIPDALKDARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFA 286
SFC +T+ S DQ++++ DAL+D RF N +V G P +RFY G PL+ G +G+LC
Sbjct: 73 SFCTYTILS--DQVLLVEDALQDERFSANPLVTGEPHIRFYAGAPLVLGAGIHLGSLCLI 130
Query: 287 DVKPREFDASRCVVLNNLAELVVRHL 364
D PR F A + L +LA++VV L
Sbjct: 131 DRVPRSFSAEQQEQLRDLAQIVVAQL 156
[157][TOP]
>UniRef100_Q26DS7 Sensor protein n=1 Tax=Flavobacteria bacterium BBFL7
RepID=Q26DS7_9BACT
Length = 402
Score = 77.0 bits (188), Expect = 6e-13
Identities = 45/123 (36%), Positives = 69/123 (56%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I EAP +L+ L D R F++ +G + P SFCG + S ++IM++ DA +D R
Sbjct: 41 ICEAPISLITLVDKDRNFLKSRQGV-DLSESPRDISFCGHAIVSE-EEIMIVTDAREDER 98
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G + FY G PL+ NG+++GTLC D KPR + L +A+ V+
Sbjct: 99 FKDNPLVEGLDAI-FYAGVPLVDVNGYKLGTLCVYDHKPRVLTNHQISALKAMAKQVMSL 157
Query: 362 LEK 370
E+
Sbjct: 158 FEE 160
[158][TOP]
>UniRef100_B8BRK9 Putative uncharacterized protein (Fragment) n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8BRK9_THAPS
Length = 164
Score = 77.0 bits (188), Expect = 6e-13
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 6/127 (4%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P ALV+L D+ R + + + G + P +FC + ND + V+PDAL+D R
Sbjct: 38 MFNVPIALVSLVDEDRQWFKSSCGLSGVAETPRDHAFCAHAIL--NDDLFVVPDALQDER 95
Query: 182 FCNNEMVRGGPGVRFYCG----TPLIASNGHRI--GTLCFADVKPREFDASRCVVLNNLA 343
F +N +V G P VRFY G TP++ +G ++ G+LC D KPR+ L +
Sbjct: 96 FADNPLVVGAPNVRFYAGYPLKTPMLNGDGSQVTLGSLCVIDSKPRDLRLEERNALRDFG 155
Query: 344 ELVVRHL 364
+V R +
Sbjct: 156 AMVEREI 162
[159][TOP]
>UniRef100_Q7NJL6 Sensor protein n=1 Tax=Gloeobacter violaceus RepID=Q7NJL6_GLOVI
Length = 448
Score = 76.6 bits (187), Expect = 8e-13
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 1/140 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P +++L D+ R++ + G + S C W + + ++MVI DA D R
Sbjct: 69 LFAVPVCVISLVDECRVWFKSKVG-WSGEQVQRDESLCSWAILQK--ELMVIHDARFDGR 125
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358
N V+ PG+RFY G PL + +G +GTLC D +P FD + L +LA +VV
Sbjct: 126 LACNPWVQAEPGIRFYAGAPLTSPDGFNLGTLCLIDTQPHATFDEPQRRTLADLAAIVVD 185
Query: 359 HLEKDIALQLRAHDNNSLAA 418
LE + L L + + + LAA
Sbjct: 186 ELE--LRLSLESAEQSRLAA 203
[160][TOP]
>UniRef100_Q4UZ06 Histidine kinase/response regulator hybrid protein n=2
Tax=Xanthomonas campestris pv. campestris
RepID=Q4UZ06_XANC8
Length = 865
Score = 76.6 bits (187), Expect = 8e-13
Identities = 43/119 (36%), Positives = 62/119 (52%)
Frame = +2
Query: 11 APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190
+P AL++L D R + + G G P SFC +T+ + ++ +PDA+ D RF +
Sbjct: 48 SPMALISLLDADRQWFKARCGTDLEGT-PRSVSFCSYTVMGTD--LLEVPDAIADPRFTH 104
Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
N +V PG+R Y G PLI G+ GTLC +PR D ++ L LA V LE
Sbjct: 105 NPLVTAAPGIRSYVGVPLIGREGYAYGTLCMLSTRPRVLDENQKQALIRLARQAVNQLE 163
[161][TOP]
>UniRef100_Q4UVQ7 Putative uncharacterized protein n=2 Tax=Xanthomonas campestris pv.
campestris RepID=Q4UVQ7_XANC8
Length = 334
Score = 76.6 bits (187), Expect = 8e-13
Identities = 46/129 (35%), Positives = 65/129 (50%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P AL++L D R + + G + + P +FC + + DQ+M + D D RF N
Sbjct: 44 PMALISLIDQDRQWFKSRVG-MQPAETPRDLAFCAHAIL-QPDQMMEVGDTFVDPRFARN 101
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373
+V GGP +RFY G PL+ S+G +GTLC D PR + L LA VV +E
Sbjct: 102 ALVTGGPQIRFYAGAPLLTSDGVALGTLCVLDRAPRTLSDAERTALQALARQVVTTIELR 161
Query: 374 IALQLRAHD 400
A +L D
Sbjct: 162 QAARLLEGD 170
[162][TOP]
>UniRef100_C5B0Z3 Sensor protein n=1 Tax=Methylobacterium extorquens AM1
RepID=C5B0Z3_METEA
Length = 1125
Score = 76.6 bits (187), Expect = 8e-13
Identities = 44/121 (36%), Positives = 64/121 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F A ++L D R +++ G SFC T+A D ++V+PDA +D R
Sbjct: 39 LFGVAIAYISLVDAERQWLKACVGIMPT-QTSRAGSFCDRTIAQ--DAMLVVPDARRDPR 95
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F E+V G P + FY G PLI G R+G+LC AD +PR+F L +LAE+V
Sbjct: 96 FSGLEIVTGPPHIVFYAGAPLILRPGVRLGSLCLADSQPRDFTPEDAAALRDLAEIVTAQ 155
Query: 362 L 364
+
Sbjct: 156 M 156
[163][TOP]
>UniRef100_B1ZHF5 Sensor protein n=1 Tax=Methylobacterium populi BJ001
RepID=B1ZHF5_METPB
Length = 1120
Score = 76.6 bits (187), Expect = 8e-13
Identities = 50/146 (34%), Positives = 70/146 (47%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F AA + L D R +++ G + P SFC T+ D I+ + DA +D R
Sbjct: 39 LFGVAAAYICLVDAERQWLKACSGTMP-AETPREGSFCVRTI--EQDAILAVRDARRDPR 95
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +V G P V FY G PLI G R+G LC D +PR+F L +LAE+V
Sbjct: 96 FSGLGIVTGPPHVVFYAGAPLILRPGVRLGALCLVDSQPRDFTPDDAAALRDLAEIV--- 152
Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRR 439
Q+R +N + A+ LRR
Sbjct: 153 -----TAQMRLRRDNLVTASEKALRR 173
[164][TOP]
>UniRef100_B0RRX7 Putative sensor protein n=1 Tax=Xanthomonas campestris pv.
campestris str. B100 RepID=B0RRX7_XANCB
Length = 377
Score = 76.6 bits (187), Expect = 8e-13
Identities = 46/129 (35%), Positives = 65/129 (50%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P AL++L D R + + G + + P +FC + + DQ+M + D D RF N
Sbjct: 87 PMALISLIDQDRQWFKSRVG-MQPAETPRDLAFCAHAIL-QPDQMMEVGDTFVDPRFARN 144
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373
+V GGP +RFY G PL+ S+G +GTLC D PR + L LA VV +E
Sbjct: 145 ALVTGGPQIRFYAGAPLLTSDGVALGTLCVLDRAPRTLSDAERTALQALARQVVTTIELR 204
Query: 374 IALQLRAHD 400
A +L D
Sbjct: 205 QAARLLEGD 213
[165][TOP]
>UniRef100_B0RNH7 Diguanylate cyclase sensor protein n=1 Tax=Xanthomonas campestris
pv. campestris str. B100 RepID=B0RNH7_XANCB
Length = 865
Score = 76.6 bits (187), Expect = 8e-13
Identities = 43/119 (36%), Positives = 62/119 (52%)
Frame = +2
Query: 11 APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190
+P AL++L D R + + G G P SFC +T+ + ++ +PDA+ D RF +
Sbjct: 48 SPMALISLLDADRQWFKARCGTDLEGT-PRSVSFCSYTVMGTD--LLEVPDAIADPRFTH 104
Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
N +V PG+R Y G PLI G+ GTLC +PR D ++ L LA V LE
Sbjct: 105 NPLVTAAPGIRSYVGVPLIGREGYAYGTLCMLSTRPRVLDENQKQALIRLARQAVNQLE 163
[166][TOP]
>UniRef100_C7C741 Sensor protein n=1 Tax=Methylobacterium extorquens DM4
RepID=C7C741_METED
Length = 1125
Score = 76.6 bits (187), Expect = 8e-13
Identities = 44/121 (36%), Positives = 64/121 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F A ++L D R +++ G SFC T+A D ++V+PDA +D R
Sbjct: 39 LFGVAIAYISLVDAERQWLKACVGIMPT-QTSRAGSFCDRTIAQ--DAMLVVPDARRDPR 95
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F E+V G P + FY G PLI G R+G+LC AD +PR+F L +LAE+V
Sbjct: 96 FSGLEIVTGPPHIVFYAGAPLILRPGVRLGSLCLADSQPRDFTPEDAAALRDLAEIVTAQ 155
Query: 362 L 364
+
Sbjct: 156 M 156
[167][TOP]
>UniRef100_C4ZM83 Sensor protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZM83_THASP
Length = 878
Score = 76.6 bits (187), Expect = 8e-13
Identities = 53/144 (36%), Positives = 71/144 (49%), Gaps = 3/144 (2%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF P ALV+L DD R + + A G P SFC + S +V+ DA +D R
Sbjct: 41 IFGVPIALVSLVDDARQWFKSAHGLCV-AQTPRDVSFCTHVVFSNAP--LVVEDAARDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREF---DASRCVVLNNLAELV 352
F +N +V P VRFY G PL + G +GTLC D PR F + +R +L AE +
Sbjct: 98 FADNPLVTAAPQVRFYAGEPLRSDQGFVLGTLCVIDTVPRRFEEAERARLRLLARQAEQL 157
Query: 353 VRHLEKDIALQLRAHDNNSLAAAY 424
+R K L A + +AA Y
Sbjct: 158 IRLHRKRQRLADEARRSARIAARY 181
[168][TOP]
>UniRef100_Q3BM12 Putative signal transduction protein n=1 Tax=Xanthomonas campestris
pv. vesicatoria str. 85-10 RepID=Q3BM12_XANC5
Length = 598
Score = 76.3 bits (186), Expect = 1e-12
Identities = 40/119 (33%), Positives = 65/119 (54%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P ALV+L D+ R + + G + P +FC T+ + D +M + DA D RF +N
Sbjct: 65 PIALVSLVDEHRQWWKANIGLPGVSETPRELAFCAHTI--QGDAVMEVRDAPADPRFHDN 122
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEK 370
+V PG+R+Y G P++ +G R+GT+C D +PR + ++ L LA + LE+
Sbjct: 123 ALVTDAPGIRYYAGAPIVLPDGLRMGTVCVIDQRPRALEPAQLQALQQLARVAAEGLEQ 181
[169][TOP]
>UniRef100_B7L1C7 Sensor protein n=1 Tax=Methylobacterium chloromethanicum CM4
RepID=B7L1C7_METC4
Length = 837
Score = 76.3 bits (186), Expect = 1e-12
Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 3/151 (1%)
Frame = +2
Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
+AP A + D R +I+ A G R + P FC T+A D I+V+P+ ++
Sbjct: 78 DAPMAHINFIDADRQWIKAAVGHDAR-EMPLHLGFCTQTLAE--DGILVLPNLKREPELA 134
Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+N +V G P +RFY G PLI +G IGTLC D +PR + +L LA ++ LE
Sbjct: 135 SNPLVTGAPHLRFYAGVPLITPDGWAIGTLCVLDREPRTLTTQQEFILKALARNIMAQLE 194
Query: 368 ---KDIALQLRAHDNNSLAAAYGXLRRTLDC 451
AL+ R + +A A L +DC
Sbjct: 195 SRRSAAALRAREAELRLVADAMPVLIGFIDC 225
[170][TOP]
>UniRef100_A0KTF2 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella sp. ANA-3
RepID=A0KTF2_SHESA
Length = 322
Score = 76.3 bits (186), Expect = 1e-12
Identities = 45/121 (37%), Positives = 61/121 (50%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF P LV L D R + + +G + P S C A +D I V+ DALKD R
Sbjct: 41 IFSLPICLVTLVDANRQWFKSRQG-IEVEQTPRDISLCAH--AINHDGIFVVHDALKDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
FC+N +V P +RFY G PL +R+GTLC +PR+F L +L ++V
Sbjct: 98 FCDNPLVTEPPHIRFYVGYPLTIQGEYRVGTLCLIGNEPRDFTEEDAETLTDLGQMVEAE 157
Query: 362 L 364
L
Sbjct: 158 L 158
[171][TOP]
>UniRef100_Q08QL2 Sensor protein n=1 Tax=Stigmatella aurantiaca DW4/3-1
RepID=Q08QL2_STIAU
Length = 421
Score = 76.3 bits (186), Expect = 1e-12
Identities = 48/129 (37%), Positives = 67/129 (51%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P ALV+L D R + + G + +FC + D++ V+PDA D RF +N
Sbjct: 45 PVALVSLLDQGRQWFKARVGV-DAAETHRDLAFCAHAILQ--DELFVVPDAHLDERFQDN 101
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373
+V G P VRFY GTPL +NG +GTLC D PRE + L L+ R +E
Sbjct: 102 PLVTGEPHVRFYAGTPLKTANGLNLGTLCVIDHVPRELKPEQTEAL----RLLGRQVESQ 157
Query: 374 IALQLRAHD 400
+ L+LRA +
Sbjct: 158 LQLRLRAQE 166
[172][TOP]
>UniRef100_C5AK43 Putative GAF sensor protein n=1 Tax=Burkholderia glumae BGR1
RepID=C5AK43_BURGB
Length = 372
Score = 76.3 bits (186), Expect = 1e-12
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F AP AL++L R + + G R + P W+FC +T+ + V+ DA +D+R
Sbjct: 240 VFSAPIALISLVTTDRQWFKAHHGLGVR-ETPRIWAFCNYTILGDS---FVVEDAQQDSR 295
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +RFY G PL S+G+ +G+LC D PR+ + L LA+L+
Sbjct: 296 FKDNVLVTGAPQIRFYAGAPLRDSDGYALGSLCVIDQVPRKASDTGMDALRLLADLISSR 355
Query: 362 --LEKDIALQLRAH 397
L + + QL+ H
Sbjct: 356 ICLAQKLREQLQRH 369
[173][TOP]
>UniRef100_B4WG98 GGDEF domain protein n=1 Tax=Synechococcus sp. PCC 7335
RepID=B4WG98_9SYNE
Length = 690
Score = 76.3 bits (186), Expect = 1e-12
Identities = 48/137 (35%), Positives = 68/137 (49%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+ + PA LV D R++++ GA + P +FC T+ R+ +VI DA +
Sbjct: 41 VCQMPAGLVTFVDTNRLWVKARVGA-DISETPRYLAFCDQTI--RHVDTLVIEDAQQHPE 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F NN +V G P VRFY G PLI +G+ +GTLC D +PR + L L+ VV
Sbjct: 98 FRNNPLVVGPPYVRFYAGHPLITPDGYALGTLCVLDYQPRRMSPQQINALRMLSHQVVAQ 157
Query: 362 LEKDIALQLRAHDNNSL 412
+E NNSL
Sbjct: 158 MELSRQAHQLQQVNNSL 174
[174][TOP]
>UniRef100_Q0HYE2 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella sp. MR-7
RepID=Q0HYE2_SHESR
Length = 323
Score = 75.9 bits (185), Expect = 1e-12
Identities = 45/121 (37%), Positives = 62/121 (51%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF P LV L D R + + +G + + SFC A + + +I DALKD R
Sbjct: 41 IFALPICLVTLVDANRQWFKSRQG-LEVTETSRDISFCAH--AINHSGVFIINDALKDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
FC+N +V P +RFY G PL +R+GTLC +PREF A L +L ++V
Sbjct: 98 FCDNPLVIEPPHIRFYAGYPLTIHGEYRVGTLCLIGSEPREFSADDIETLTDLGQMVEAE 157
Query: 362 L 364
L
Sbjct: 158 L 158
[175][TOP]
>UniRef100_C0QFX2 Two-component hybrid protein, sensory box hisitidine
kinase/adenylate cyclase n=1 Tax=Desulfobacterium
autotrophicum HRM2 RepID=C0QFX2_DESAH
Length = 378
Score = 75.9 bits (185), Expect = 1e-12
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 3/136 (2%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P L++L D R + + G + P +FC + + IM++PDA D+RF +N
Sbjct: 44 PICLISLVDSDRQWFKSKIG-LNVEETPRDQAFCAHAILEPD--IMIVPDATLDSRFFDN 100
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE-- 367
+V P +RFY G PLI G+ +GTLC D KPR+ + +L LA VV +E
Sbjct: 101 PLVLKDPRIRFYAGAPLITPRGNELGTLCVIDQKPRKLTVEQVELLGILARQVVTQIELR 160
Query: 368 -KDIALQLRAHDNNSL 412
I L+ D+N+L
Sbjct: 161 RTGIELRKAWEDSNNL 176
[176][TOP]
>UniRef100_C7C538 Putative uncharacterized protein n=1 Tax=Enterobacter turicensis
RepID=C7C538_9ENTR
Length = 326
Score = 75.9 bits (185), Expect = 1e-12
Identities = 41/117 (35%), Positives = 63/117 (53%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F AP ALV+L D R++ + +G + + P SFC + ++ +++PD D R
Sbjct: 41 LFNAPVALVSLVDQERLWFKSCDGYCVQ-EVPRDISFCAHAILK--NEPLIVPDTHNDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
F +N +V G VRFY G P+ +G G+ C D PREF A +L +LA +V
Sbjct: 98 FFDNPLVTGETNVRFYAGCPVHLPDGATAGSFCIIDNVPREFGAEEVAMLKDLAAIV 154
[177][TOP]
>UniRef100_C1XPI5 Diguanylate cyclase (GGDEF) domain-containing protein n=1
Tax=Meiothermus silvanus DSM 9946 RepID=C1XPI5_9DEIN
Length = 343
Score = 75.9 bits (185), Expect = 1e-12
Identities = 47/149 (31%), Positives = 72/149 (48%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I P AL++ D +R + + A+G + + P SFC + + V+ DA +D R
Sbjct: 40 IGRTPIALISFIDRQRQWFKSAQG-LEIHEIPREASFCAHAILQHG--VTVVSDAWQDER 96
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F ++ +V G P +RFY G PLI NG +GT+C D +PR+ + L LA V+
Sbjct: 97 FADHPLVVGEPKIRFYAGAPLITPNGEALGTVCVMDRQPRQMEEEEQKALAALARQVMAQ 156
Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRRTLD 448
LE ++ R L A L+ D
Sbjct: 157 LELRREIRERQRYQELLEEANARLKVLAD 185
[178][TOP]
>UniRef100_B5JQD0 Sensor protein n=1 Tax=Verrucomicrobiae bacterium DG1235
RepID=B5JQD0_9BACT
Length = 401
Score = 75.9 bits (185), Expect = 1e-12
Identities = 40/126 (31%), Positives = 70/126 (55%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I E P AL++L D+ R + + G + + +FC + ++++++PDA KD R
Sbjct: 41 ICEVPIALISLIDEERQWFKAKVGLDAK-ETSRELAFCAHAILEP-EEMLLVPDATKDKR 98
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +RFY G+P++ + +GTLC D + RE + L +L++ V +
Sbjct: 99 FRDNPLVTGAPDIRFYAGSPIVTHDRQALGTLCVIDTETRELSEKQKEALRHLSKQVCAN 158
Query: 362 LEKDIA 379
LE +A
Sbjct: 159 LELRLA 164
[179][TOP]
>UniRef100_A4B9Q6 Diguanylate cyclase, putative n=1 Tax=Reinekea blandensis MED297
RepID=A4B9Q6_9GAMM
Length = 320
Score = 75.9 bits (185), Expect = 1e-12
Identities = 44/117 (37%), Positives = 62/117 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+FE P AL L D+ R + + G + + SFCG A ++ + LKDAR
Sbjct: 41 MFEVPIALFTLVDENRQWFKSCFGVDLK-ETDREISFCGH--AINGHDTFIVENTLKDAR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
F +N +V G PG+RFY GTP+ +G+ IGTLC D R F +L +LA L+
Sbjct: 98 FHDNPLVEGEPGIRFYAGTPVKTRDGYSIGTLCVMDRVARVFHPEDQAMLEDLARLL 154
[180][TOP]
>UniRef100_Q3MCU9 Sensor protein n=1 Tax=Anabaena variabilis ATCC 29413
RepID=Q3MCU9_ANAVT
Length = 1550
Score = 75.5 bits (184), Expect = 2e-12
Identities = 40/118 (33%), Positives = 60/118 (50%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P AL++L D R + + G +R + P +FC +T+ + + ++PDA D RF N
Sbjct: 44 PIALISLIDQNRQWFKSKVG-LERRETPRDEAFCTYTILESD--VFIVPDATTDERFATN 100
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+V P +RFY G PL G+ +GTLC D PR + L L V++ LE
Sbjct: 101 PLVISDPKIRFYAGVPLTNPEGYSLGTLCVIDYIPRNLSPEQIEALQILGRQVIKQLE 158
[181][TOP]
>UniRef100_Q319B9 GAF domain n=1 Tax=Prochlorococcus marinus str. MIT 9312
RepID=Q319B9_PROM9
Length = 249
Score = 75.5 bits (184), Expect = 2e-12
Identities = 42/118 (35%), Positives = 64/118 (54%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P +L+ L D R + + G + + WSFC T A + + ++I DA +D RF NN
Sbjct: 46 PISLMTLVDKDRQWFKSKVG-LQISETRRDWSFC--THAIKENSPLIIHDAFQDERFINN 102
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+V G P +RFY G PL S+G+++GTLC D KP + ++ L+ +V LE
Sbjct: 103 PLVTGDPKIRFYAGFPLKTSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSRQIVSFLE 160
[182][TOP]
>UniRef100_Q1GWG1 Signal transduction histidine kinase n=1 Tax=Sphingopyxis
alaskensis RepID=Q1GWG1_SPHAL
Length = 514
Score = 75.5 bits (184), Expect = 2e-12
Identities = 42/100 (42%), Positives = 59/100 (59%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+AP AL++L DD R + + A G + P SFC + ++Q +++ DA D R
Sbjct: 67 LFDAPIALISLVDDCRQWFKSAHG-LDVPETPRDISFCKHVV--EDEQPLIVGDAASDPR 123
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR 301
F +N +V G P +RFY G PL A NG +GTLC D KPR
Sbjct: 124 FQDNPLVTGEPYIRFYGGVPLFAYNGAILGTLCIIDRKPR 163
[183][TOP]
>UniRef100_Q12JR1 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella
denitrificans OS217 RepID=Q12JR1_SHEDO
Length = 320
Score = 75.5 bits (184), Expect = 2e-12
Identities = 41/122 (33%), Positives = 66/122 (54%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F +LV+L D+ R + + +G + SFCG A D + +IPD +DAR
Sbjct: 41 MFGVQISLVSLVDENRQWFKSKQG-LDAEETSREISFCGH--AINQDGLFIIPDTNEDAR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PL +G +GTLC D KP+ D+ +LN+L ++ +
Sbjct: 98 FADNPLVTDAPNIRFYAGYPLKLRHGINLGTLCLIDSKPKILDSEDRQLLNDLGAMIEQE 157
Query: 362 LE 367
++
Sbjct: 158 IK 159
[184][TOP]
>UniRef100_A2BY81 GAF domain n=1 Tax=Prochlorococcus marinus str. MIT 9515
RepID=A2BY81_PROM5
Length = 238
Score = 75.5 bits (184), Expect = 2e-12
Identities = 42/118 (35%), Positives = 67/118 (56%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P +L+ L D + + + G + + WSFC T A + + ++I DA +D RF NN
Sbjct: 46 PISLMTLVDRDKQWFKSKVG-LEISETKRDWSFC--THAIQENSPLIIEDAFQDERFINN 102
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+V G P +RFY G PL S+G+++GTLC D KP +++ V+ L++ +V LE
Sbjct: 103 PLVTGDPKIRFYAGFPLKNSDGNKLGTLCVIDRKPGNLSSNQYNVMELLSKQIVSFLE 160
[185][TOP]
>UniRef100_C2HZG0 GGDEF domain protein n=1 Tax=Vibrio cholerae bv. albensis VL426
RepID=C2HZG0_VIBCH
Length = 351
Score = 75.5 bits (184), Expect = 2e-12
Identities = 40/121 (33%), Positives = 63/121 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P AL++L D+ R + + G + SFCG + + ++ VI DA +D R
Sbjct: 68 LFNVPIALISLVDENRQWFKSCYG-LNVSETSRDISFCGHAILGK--KVFVIEDASQDPR 124
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PL+ + +GTLC D KPR+ + +LA++ R
Sbjct: 125 FADNPLVTDAPNIRFYAGVPLLYEDSLALGTLCIIDTKPRQLTQDELLDFYDLAKMAERE 184
Query: 362 L 364
L
Sbjct: 185 L 185
[186][TOP]
>UniRef100_B6ALC1 Diguanylate cyclase with GAF sensor n=1 Tax=Leptospirillum sp.
Group II '5-way CG' RepID=B6ALC1_9BACT
Length = 322
Score = 75.5 bits (184), Expect = 2e-12
Identities = 43/121 (35%), Positives = 61/121 (50%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P ALV L D+ R + + G + P SFCG + + +IPDA D R
Sbjct: 41 LFNVPIALVTLVDEDRQWFKSNMG-LAVSETPRSVSFCGHAILQ--EDFFIIPDARSDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +RFY G L + +IGTLC D +PR + +VL +L L +
Sbjct: 98 FSDNPLVLGDPRIRFYAGCVLRTQDNQKIGTLCLIDHEPRAMEPQDLLVLEDLTSLAEQE 157
Query: 362 L 364
L
Sbjct: 158 L 158
[187][TOP]
>UniRef100_B4VLP5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420
RepID=B4VLP5_9CYAN
Length = 568
Score = 75.5 bits (184), Expect = 2e-12
Identities = 40/118 (33%), Positives = 60/118 (50%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P AL++L D R + + G P +FC + + D IMV+P+AL+D RF N
Sbjct: 96 PIALISLIDQNRQWFKSKVG-IDATQTPRDQAFCAHAILNPED-IMVVPNALEDERFAGN 153
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+V P +RFY G PL+ +G +GTLC D P + + L L+ V+ +E
Sbjct: 154 PLVTSDPNIRFYAGAPLVTEDGFPLGTLCVIDQIPHDLTPQQISALQALSRQVINQME 211
[188][TOP]
>UniRef100_A8TK82 Sensor protein n=1 Tax=alpha proteobacterium BAL199
RepID=A8TK82_9PROT
Length = 417
Score = 75.5 bits (184), Expect = 2e-12
Identities = 41/116 (35%), Positives = 62/116 (53%)
Frame = +2
Query: 20 ALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEM 199
A ++L D R++ + A G + P SFC + A + ++M I D D F N +
Sbjct: 46 AFISLVDAERVWFKSAFGVEGVREMPRHQSFC--SHAITDPRVMEIEDTWSDPVFAENPL 103
Query: 200 VRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
V G P RFY G PLI +G+R+GTLC +PR+ D + L +L+++ R LE
Sbjct: 104 VTGPPHTRFYAGAPLILRSGYRVGTLCVLGDQPRKLDDDQRASLIDLSQIATRFLE 159
[189][TOP]
>UniRef100_Q9RZS0 GGDEF family protein n=1 Tax=Deinococcus radiodurans
RepID=Q9RZS0_DEIRA
Length = 516
Score = 75.1 bits (183), Expect = 2e-12
Identities = 50/148 (33%), Positives = 69/148 (46%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I PAA + D R + + GA +R P S C WT+ D +V+ +A D R
Sbjct: 42 ILRTPAAYINFVDQSRQWTKACVGA-ERDSKPLSESMCAWTILQ--DAPLVVENARLDRR 98
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F + ++V G ++ Y G PL +GHRIGTLC D + L +LA LV+
Sbjct: 99 FSHMQLVTGEASLQMYAGVPLTTPSGHRIGTLCVTDNQCHPLGDEDIQALQDLAALVMTE 158
Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRRTL 445
LE A Q D + + LRRTL
Sbjct: 159 LELRAANQELQRDLQAASCQSEELRRTL 186
[190][TOP]
>UniRef100_Q8PPS5 Histidine kinase-response regulator hybrid protein n=1
Tax=Xanthomonas axonopodis pv. citri RepID=Q8PPS5_XANAC
Length = 880
Score = 75.1 bits (183), Expect = 2e-12
Identities = 48/119 (40%), Positives = 59/119 (49%)
Frame = +2
Query: 11 APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190
AP A+V+L D R + + G G P SFC + A ++M +PDA D RF N
Sbjct: 70 APMAMVSLLDADRQWFKARCGTDLEGT-PRSVSFC--SHAVMGTELMEVPDAEADPRFVN 126
Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
N +V PGVR Y G PLI G+ GTLC PR D +R L LA V LE
Sbjct: 127 NPLVVAAPGVRSYVGVPLIGREGYAYGTLCTLSTTPRVLDENRKQALIRLARQAVNKLE 185
[191][TOP]
>UniRef100_Q3BSA9 Putative sensor protein n=1 Tax=Xanthomonas campestris pv.
vesicatoria str. 85-10 RepID=Q3BSA9_XANC5
Length = 361
Score = 75.1 bits (183), Expect = 2e-12
Identities = 45/125 (36%), Positives = 63/125 (50%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P AL++L D R + + G ++ + P SFC + DQ+M + D D RF N
Sbjct: 68 PMALISLVDTHRQWFKSRLG-MQQSETPRELSFCAHAILEP-DQVMEVGDTHLDKRFARN 125
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373
+V G P +RFY G PL+ +G +GTLC D PR A+ L LA VV +E
Sbjct: 126 ALVTGEPQIRFYAGAPLLTPDGIALGTLCVLDRVPRRLSATERDALQALARQVVSTIELQ 185
Query: 374 IALQL 388
A +L
Sbjct: 186 QAARL 190
[192][TOP]
>UniRef100_B7KR27 Signal transduction histidine kinase n=1 Tax=Methylobacterium
chloromethanicum CM4 RepID=B7KR27_METC4
Length = 1016
Score = 75.1 bits (183), Expect = 2e-12
Identities = 46/129 (35%), Positives = 65/129 (50%)
Frame = +2
Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
EAP A++ L D R F + G R + P SFC A +D + +PD +D RF
Sbjct: 56 EAPIAVINLVGDGRQFFKAEVGLGVR-ETPLETSFC--RQAILHDDFLYVPDTARDPRFE 112
Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
N +V G PG+RFY G L G IGT+C D +PRE + + L LA + +E
Sbjct: 113 GNPLVSGDPGLRFYAGALLRTDEGQPIGTVCVLDTRPRELSERQRLGLMRLARQAMTQME 172
Query: 368 KDIALQLRA 394
+L+ +A
Sbjct: 173 LRRSLREQA 181
[193][TOP]
>UniRef100_A4TE01 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Mycobacterium
gilvum PYR-GCK RepID=A4TE01_MYCGI
Length = 603
Score = 75.1 bits (183), Expect = 2e-12
Identities = 40/122 (32%), Positives = 63/122 (51%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+ + P AL+ D R +++ +G + SFC TM D ++ IPD D+R
Sbjct: 58 VCDVPMALIGFLDAERQWLKSRQGV-GHSEIARELSFCASTMGD-GDTLIEIPDTRLDSR 115
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
+ MV G P +RFY G P+ + GH +GT+C DV+PR ++ L LA+ V+
Sbjct: 116 LAGHPMVTGDPHLRFYAGMPIRTAEGHALGTICVMDVEPRTLSDAQRSHLRTLADQVMNL 175
Query: 362 LE 367
L+
Sbjct: 176 LD 177
[194][TOP]
>UniRef100_B4D9S4 Sensor protein n=1 Tax=Chthoniobacter flavus Ellin428
RepID=B4D9S4_9BACT
Length = 683
Score = 75.1 bits (183), Expect = 2e-12
Identities = 44/120 (36%), Positives = 63/120 (52%)
Frame = +2
Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
E P A+V L DDRR +++ G + P +FC + D++MV+ DA D RF
Sbjct: 44 ETPVAMVTLLDDRRQWLKARLGTHIT-ETPLAHAFCALAI-EHPDEVMVVTDARYDERFR 101
Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
N V G +RFY G P++ +G IGTLC D +PR A++ +L LA V +E
Sbjct: 102 GNPYVTGYQKIRFYAGAPMVTPDGVPIGTLCVIDRQPRHISAAKRELLKALAHEAVSLME 161
[195][TOP]
>UniRef100_A5P8W2 Putative uncharacterized protein n=1 Tax=Erythrobacter sp. SD-21
RepID=A5P8W2_9SPHN
Length = 507
Score = 75.1 bits (183), Expect = 2e-12
Identities = 42/102 (41%), Positives = 57/102 (55%), Gaps = 1/102 (0%)
Frame = +2
Query: 2 IFEAPAALVALFD-DRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDA 178
+F AP A+V++ + DR+ F+ A + P SFC M MVIPDA +D
Sbjct: 53 LFGAPMAMVSIVEKDRQAFL--ARTGIEADGTPRNVSFCAHAMLGAEP--MVIPDATQDP 108
Query: 179 RFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE 304
RF N +V G P VRFY G PL+++ G +G LC D +PRE
Sbjct: 109 RFAENALVTGSPHVRFYAGYPLVSTEGAPLGALCVIDTEPRE 150
[196][TOP]
>UniRef100_Q5ZVF0 Adenylate cyclase PLUS two component hybrid sensor and regulator
n=1 Tax=Legionella pneumophila subsp. pneumophila str.
Philadelphia 1 RepID=Q5ZVF0_LEGPH
Length = 441
Score = 74.7 bits (182), Expect = 3e-12
Identities = 46/128 (35%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGA----FKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
P A ++ D + + + G R D SFC +T+ + ++ M+I D L D R
Sbjct: 77 PIAFISFIDSEHQWFKSSCGIGLNKISRND-----SFCHYTI--QQNKPMIISDTLLDER 129
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
FCNN V P +RFY G PL +G +GTLC D KPR D + +L +LA L
Sbjct: 130 FCNNPYVTSEPNIRFYAGFPLSTVDGFNVGTLCAIDKKPRNLDETEIQILKDLATLAEDQ 189
Query: 362 LE-KDIAL 382
L DI+L
Sbjct: 190 LNLLDISL 197
[197][TOP]
>UniRef100_A1T6X4 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Mycobacterium
vanbaalenii PYR-1 RepID=A1T6X4_MYCVP
Length = 599
Score = 74.7 bits (182), Expect = 3e-12
Identities = 48/143 (33%), Positives = 72/143 (50%)
Frame = +2
Query: 11 APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190
AP AL++ D R +I+ G + SFC T+A+ + ++ IPD D RF
Sbjct: 61 APMALLSFVDATRQWIKSRHGV-DVAEIDREVSFCARTLAAAS--LLEIPDTHLDPRFAP 117
Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEK 370
+ MV G P VRFY G P++ +GH +G LC D +PR + V L LA+ V+ L+
Sbjct: 118 HPMVTGDPHVRFYAGVPIVTGDGHALGALCVMDREPRTLSDPQRVHLQTLADQVLTLLQL 177
Query: 371 DIALQLRAHDNNSLAAAYGXLRR 439
+ A + + AA LR+
Sbjct: 178 RSRTRQTASEIDRRLAADAALRQ 200
[198][TOP]
>UniRef100_A6EHA0 Sensor protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EHA0_9SPHI
Length = 814
Score = 74.7 bits (182), Expect = 3e-12
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 4/128 (3%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I P +L+ L D+ R + + G + + P +FC +T+ R ++ +PD D R
Sbjct: 43 ICNVPISLITLIDETRQWFKSRTG-LEISETPREVAFCQYTIMDR--EVFEVPDTWNDER 99
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLA----EL 349
F +N +V G PG+RFY G PL +G+ +GTLC D KP + + L L+ +L
Sbjct: 100 FRSNVLVTGDPGIRFYAGYPLTDPDGYALGTLCVIDRKPNQLTPQQHTALRLLSAEVMQL 159
Query: 350 VVRHLEKD 373
+V +K+
Sbjct: 160 IVERRQKE 167
[199][TOP]
>UniRef100_A1ZZA0 Multi-sensor Hybrid Histidine Kinase n=1 Tax=Microscilla marina
ATCC 23134 RepID=A1ZZA0_9SPHI
Length = 455
Score = 74.7 bits (182), Expect = 3e-12
Identities = 46/138 (33%), Positives = 68/138 (49%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I E P +L++L + + + + G R + P SFC A + V+ DA KD R
Sbjct: 41 ICETPVSLMSLVAEDKQWFKAKVGLEPR-EAPRELSFCAH--AIHTPDLFVVKDATKDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N V P VRFY G PL +G +GTLC D +PR+ D ++ L LA V+
Sbjct: 98 FHDNPFVADHPKVRFYAGMPLTTPDGFNLGTLCVIDQRPRDLDEAQKKALKTLAAQVIAQ 157
Query: 362 LEKDIALQLRAHDNNSLA 415
LE + L+ + +A
Sbjct: 158 LELRLKLKTIGQEKRVIA 175
[200][TOP]
>UniRef100_Q2JR31 Sensor protein n=1 Tax=Synechococcus sp. JA-3-3Ab
RepID=Q2JR31_SYNJA
Length = 1523
Score = 74.3 bits (181), Expect = 4e-12
Identities = 43/118 (36%), Positives = 61/118 (51%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P ALV+L D+ R + + G + + P +FC + S + + V+PDA +D RF +N
Sbjct: 45 PIALVSLIDEHRQWFKAKFGVDVQ-ETPRDVAFCAHAILSPQEPL-VVPDATQDPRFADN 102
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
V P +RFY G PL+ G +GTLC D +PR + L LA VV LE
Sbjct: 103 PFVTQEPHIRFYAGIPLVTPEGQALGTLCVVDYQPRHLTPEQLEQLQALAHQVVAQLE 160
[201][TOP]
>UniRef100_Q2JP01 Sensor protein n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13)
RepID=Q2JP01_SYNJB
Length = 1526
Score = 74.3 bits (181), Expect = 4e-12
Identities = 43/118 (36%), Positives = 61/118 (51%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P ALV+L D+ R + + G + + P +FC + S + + V+PDA +D RF +N
Sbjct: 45 PIALVSLIDEHRQWFKAKFGVDVQ-ETPRDVAFCAHAILSPKEPL-VVPDATQDPRFADN 102
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
V P +RFY G PL+ G +GTLC D +PR + L LA VV LE
Sbjct: 103 PFVAQEPHIRFYAGIPLVTPEGQALGTLCVVDYQPRHLTPEQLEQLQALAHQVVAQLE 160
[202][TOP]
>UniRef100_B2FT01 Putative GGDEF GAF signalling protein n=1 Tax=Stenotrophomonas
maltophilia K279a RepID=B2FT01_STRMK
Length = 572
Score = 74.3 bits (181), Expect = 4e-12
Identities = 41/102 (40%), Positives = 58/102 (56%)
Frame = +2
Query: 107 SFCGWTMASRNDQIMVIPDALKDARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFA 286
SFC T A R D++ IPDA +D RF N +V GGP +R Y G PL +++G RIGTLC
Sbjct: 69 SFC--THAIRQDELFEIPDARQDPRFSTNPLVTGGPRIRHYAGIPLGSTHGARIGTLCLL 126
Query: 287 DVKPREFDASRCVVLNNLAELVVRHLEKDIALQLRAHDNNSL 412
D P S+ ++ +LA + + LE+ L + N+L
Sbjct: 127 DPMPGVLSPSQRELMVHLARVTTQVLEQRSTLMAQVGQANAL 168
[203][TOP]
>UniRef100_B1JAA2 Diguanylate cyclase with GAF sensor n=1 Tax=Pseudomonas putida W619
RepID=B1JAA2_PSEPW
Length = 345
Score = 74.3 bits (181), Expect = 4e-12
Identities = 40/115 (34%), Positives = 62/115 (53%)
Frame = +2
Query: 23 LVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEMV 202
L++L D R + + G + P SFCG+ + + +++PDA +D RF +N +V
Sbjct: 48 LISLIDQERQWFKARIG-LAASETPRNVSFCGYAILG--EDTLLVPDATRDPRFVDNPLV 104
Query: 203 RGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
P +RFY G PL A NG IGTLC D +PR + ++ +LA L +L+
Sbjct: 105 LSAPYIRFYAGHPLRAGNGKAIGTLCMLDPRPRTLNETQQANFKDLATLAEGYLQ 159
[204][TOP]
>UniRef100_A4FHE2 Putative regulatory protein n=1 Tax=Saccharopolyspora erythraea
NRRL 2338 RepID=A4FHE2_SACEN
Length = 443
Score = 74.3 bits (181), Expect = 4e-12
Identities = 50/156 (32%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGW-----TMASRNDQIMVIPDA 166
+ +AP A V L DD RI+ FK G R + G A D+ V+ DA
Sbjct: 48 LLDAPIATVTLVDDERIW-------FKAGHGSRRLTHTGREPGLAASAIGQDEPYVVRDA 100
Query: 167 LKDARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAE 346
L D R + +V G PGVRFY P+ +G+R+GT+ D +PR+ A L++LA
Sbjct: 101 LNDPRTARHPLVTGEPGVRFYAAAPITTLDGYRLGTVDVYDTRPRDIGARDLEALSDLAG 160
Query: 347 LVVRHLEKDIALQLRAHDNNSLAAAYGXLRRTLDCF 454
+V+ LE ++ S A R T++ F
Sbjct: 161 VVIDELELRLSALTTVRAERSRRQASDRTRETMEGF 196
[205][TOP]
>UniRef100_Q0FZZ8 Putative signal transduction histidine kinase with GAF domain n=1
Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FZZ8_9RHIZ
Length = 383
Score = 74.3 bits (181), Expect = 4e-12
Identities = 46/122 (37%), Positives = 65/122 (53%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+ EAP ALV+ D+ R F + GA +R + P SFC A + + +IPDA KD R
Sbjct: 42 VCEAPIALVSFLDEHRDFFKAEVGAGRR-EAPRETSFC--RHAVLQEHLTIIPDASKDPR 98
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G + +G IGT+C D+KPR + ++ L LA
Sbjct: 99 FQHNPLVVDDPKLRFYAGAAIETPDGIPIGTVCVFDLKPRTLNENQGRTLKLLARQARTQ 158
Query: 362 LE 367
LE
Sbjct: 159 LE 160
[206][TOP]
>UniRef100_A0NUT0 PAS:GGDEF protein n=1 Tax=Labrenzia aggregata IAM 12614
RepID=A0NUT0_9RHOB
Length = 1124
Score = 74.3 bits (181), Expect = 4e-12
Identities = 40/101 (39%), Positives = 57/101 (56%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IFEAP A +++ ++ + G D P +FC + SR+ +MV+PDA +DAR
Sbjct: 40 IFEAPIAFISIVGKDDLWYKAGTGIALE-DTPRSGTFCDQAILSRD--VMVVPDAHEDAR 96
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE 304
F N+ +V G P +RFY G PL H +G LC D KPR+
Sbjct: 97 FRNSRLVCGPPHIRFYAGYPLSLDGTHILGALCVVDTKPRQ 137
[207][TOP]
>UniRef100_Q8PJT4 Putative uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv.
citri RepID=Q8PJT4_XANAC
Length = 346
Score = 73.9 bits (180), Expect = 5e-12
Identities = 45/125 (36%), Positives = 62/125 (49%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P AL++L D R + + G ++ + P SFC + DQ+M + D D RF N
Sbjct: 53 PMALISLVDTHRQWFKSRIG-MQQNETPRELSFCAHAILEP-DQVMEVGDTHLDERFVGN 110
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373
+V G P +RFY G PL+ +G +GTLC D PR + L LA VV LE
Sbjct: 111 ALVTGEPQIRFYAGAPLLTPDGIALGTLCVLDRVPRRLSVAERDALQALARQVVSTLELQ 170
Query: 374 IALQL 388
A +L
Sbjct: 171 QAARL 175
[208][TOP]
>UniRef100_Q7U6L9 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 8102
RepID=Q7U6L9_SYNPX
Length = 233
Score = 73.9 bits (180), Expect = 5e-12
Identities = 46/122 (37%), Positives = 64/122 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I AP AL++L D R + + G ++ SFC T+ N Q +++ DAL D R
Sbjct: 41 ICHAPIALISLVDQSRQWFKSRVGCDQQ-QTERDISFCAHTIL--NPQPLIVEDALFDQR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +VR P +R Y G PL N RIGTLC D P+ + + V+ LA+ VV
Sbjct: 98 FQDNPLVREDPNIRLYAGFPLNTPNDQRIGTLCVIDRMPKSLTSIQIQVMKRLADQVVTL 157
Query: 362 LE 367
LE
Sbjct: 158 LE 159
[209][TOP]
>UniRef100_Q31MP6 Diguanylate cyclase with GAF sensor n=2 Tax=Synechococcus elongatus
RepID=Q31MP6_SYNE7
Length = 506
Score = 73.9 bits (180), Expect = 5e-12
Identities = 46/132 (34%), Positives = 66/132 (50%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I E P AL++L D R + + G + P SFCG A + + + ++ DA D R
Sbjct: 41 ICEVPIALISLIDRDRQWFKSRVG-LEDDSSPRSTSFCGH--AIQQEDLFIVEDAKADPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N V P +RFY G+PLI + +GTLC D KPR + + L L+ V+R
Sbjct: 98 FVDNPFVTQEPHIRFYAGSPLITDDEQILGTLCVIDRKPRHLNDLQQQALRILSRQVIRE 157
Query: 362 LEKDIALQLRAH 397
LE +L H
Sbjct: 158 LELRRSLYQAEH 169
[210][TOP]
>UniRef100_Q0I9R3 GAF domain protein n=1 Tax=Synechococcus sp. CC9311
RepID=Q0I9R3_SYNS3
Length = 251
Score = 73.9 bits (180), Expect = 5e-12
Identities = 49/159 (30%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P AL++L D R + + A+ + + WSFC + S + +++ DALKD RF +N
Sbjct: 45 PIALLSLVDSDRQWFK-AKVGIEAEETVRDWSFCAHAIHS--SEPLIVEDALKDERFFDN 101
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE-- 367
+V+G P +R Y G PL HRIGTLC D +P + ++ +L+ V LE
Sbjct: 102 PLVKGDPKIRLYAGFPLQNDENHRIGTLCVIDREPHGLTDIQFSIMESLSRQAVAFLELR 161
Query: 368 ----KDIALQLRAHDNNSLAAAYGXLRRTLDCFDHCVAL 472
K I DN ++ + R+ D H + L
Sbjct: 162 KRSIKLIESYCSLADNGNIISTCSYCRKAKDTDGHWLHL 200
[211][TOP]
>UniRef100_Q0HFI8 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella sp. MR-4
RepID=Q0HFI8_SHESM
Length = 323
Score = 73.9 bits (180), Expect = 5e-12
Identities = 43/121 (35%), Positives = 62/121 (51%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF P +V L D R + + +G + + P SFC A +D + ++ DALKD R
Sbjct: 41 IFALPICVVTLVDANRQWFKSRQG-LEVTETPRDISFCAH--AINHDGVFIVNDALKDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V P +RFY G PL +R+GTLC +PREF L +L ++V
Sbjct: 98 FFDNPLVTEPPHIRFYAGYPLTIQGEYRVGTLCLIGNEPREFSDDDIETLTDLGQMVEAE 157
Query: 362 L 364
L
Sbjct: 158 L 158
[212][TOP]
>UniRef100_Q01ZT7 Sensor protein n=1 Tax=Candidatus Solibacter usitatus Ellin6076
RepID=Q01ZT7_SOLUE
Length = 686
Score = 73.9 bits (180), Expect = 5e-12
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 1/122 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+AP A+++ + R+F + G + SFC T+ S + +MV+PDA KD R
Sbjct: 41 LFQAPIAVISFVEQSRLFFKSHFG-LEISQISSHGSFCAHTILSND--VMVVPDAAKDPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358
F + + GG +RFY G PLI G+R+G L D +PR L +LA LV+
Sbjct: 98 FASAPVTVGGLRIRFYAGAPLITPAGYRLGALAVMDTRPRPALTEDETATLVDLAGLVMH 157
Query: 359 HL 364
L
Sbjct: 158 DL 159
[213][TOP]
>UniRef100_C5AX24 Putative histidine kinase of the HWE family n=1
Tax=Methylobacterium extorquens AM1 RepID=C5AX24_METEA
Length = 998
Score = 73.9 bits (180), Expect = 5e-12
Identities = 47/129 (36%), Positives = 64/129 (49%)
Frame = +2
Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
EAP A+V L D R F + G R + P SFC A +D + +PD +D RF
Sbjct: 38 EAPIAVVNLVGDGRQFFKAEVGLGVR-ETPLETSFC--RQAILHDDFLYVPDTARDPRFE 94
Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
N +V G PG+RFY G L G IGT+C D +PRE + L LA + +E
Sbjct: 95 GNPLVSGDPGLRFYAGALLRTDEGQPIGTVCVLDTRPRELSERQRRGLMRLARQAMTQME 154
Query: 368 KDIALQLRA 394
+L+ +A
Sbjct: 155 LRRSLREQA 163
[214][TOP]
>UniRef100_A9W3M5 Sensor protein n=1 Tax=Methylobacterium extorquens PA1
RepID=A9W3M5_METEP
Length = 1125
Score = 73.9 bits (180), Expect = 5e-12
Identities = 43/121 (35%), Positives = 63/121 (52%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F A ++L D R +++ G SFC T+A D ++V+PDA +D R
Sbjct: 39 LFGVAIAYISLVDAERQWLKACVGIMPT-QTSRAGSFCDRTIAQ--DAMLVVPDARRDPR 95
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F E+V G P + FY G PLI G R+G+LC AD +P +F L +LAE+V
Sbjct: 96 FSGLEIVTGPPHIVFYAGAPLILRPGVRLGSLCLADSQPGDFTPEDAAALRDLAEIVTAQ 155
Query: 362 L 364
+
Sbjct: 156 M 156
[215][TOP]
>UniRef100_A9W1Y6 PAS sensor protein n=1 Tax=Methylobacterium extorquens PA1
RepID=A9W1Y6_METEP
Length = 1041
Score = 73.9 bits (180), Expect = 5e-12
Identities = 47/129 (36%), Positives = 64/129 (49%)
Frame = +2
Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
EAP A+V L D R F + G R + P SFC A +D + +PD +D RF
Sbjct: 81 EAPIAVVNLVGDGRQFFKAEVGLGVR-ETPLETSFC--RQAILHDDFLYVPDTARDPRFE 137
Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
N +V G PG+RFY G L G IGT+C D +PRE + L LA + +E
Sbjct: 138 GNPLVSGDPGLRFYAGALLRTDEGQPIGTVCVLDTRPRELSERQRRGLMRLARQAMTQME 197
Query: 368 KDIALQLRA 394
+L+ +A
Sbjct: 198 LRRSLREQA 206
[216][TOP]
>UniRef100_Q1YE85 Possible sensor histidine kinase with GAF domain n=1
Tax=Aurantimonas manganoxydans SI85-9A1
RepID=Q1YE85_MOBAS
Length = 514
Score = 73.9 bits (180), Expect = 5e-12
Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 1/143 (0%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P A+V D R F + G R + P SFC + + + +M++PDA +D+RF NN
Sbjct: 68 PIAVVNFVSDTRQFFKAEVGLGVR-ETPVDISFCKHALLA--EDMMIVPDATQDSRFDNN 124
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373
+V G P +RFY G + ++ G +GT+C D PRE DA + L R L +
Sbjct: 125 PLVYGDPPLRFYAGVLVRSAEGLPLGTMCVLDHTPRELDAHQIRTL--------RLLARQ 176
Query: 374 IALQLRAHDN-NSLAAAYGXLRR 439
+++QL H + AA G +RR
Sbjct: 177 VSIQLELHRSLRRTKAALGDVRR 199
[217][TOP]
>UniRef100_A8GEI1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Serratia
proteamaculans 568 RepID=A8GEI1_SERP5
Length = 624
Score = 73.6 bits (179), Expect = 7e-12
Identities = 44/127 (34%), Positives = 66/127 (51%), Gaps = 3/127 (2%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
F AL++L D R + G R + P SFCG + R+ +V+PD D RF
Sbjct: 42 FGVSIALISLIDRERQWFLSRSGLEAR-ESPRNISFCGHAILQRD--ALVVPDTAADPRF 98
Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364
+N +V GGP + FY G PL++ +G +GTLC D P+ F + L + A ++ +L
Sbjct: 99 FDNPLVTGGPKIGFYAGQPLLSLDGLPLGTLCIIDGHPQAFSSEMVHDLRDFAAVIEEYL 158
Query: 365 ---EKDI 376
E+DI
Sbjct: 159 HSIERDI 165
[218][TOP]
>UniRef100_A8G6I2 GAF domain n=1 Tax=Prochlorococcus marinus str. MIT 9215
RepID=A8G6I2_PROM2
Length = 249
Score = 73.6 bits (179), Expect = 7e-12
Identities = 41/118 (34%), Positives = 65/118 (55%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P +L+ L D + + + G + + WSFC T A + + ++I DA +D RF NN
Sbjct: 46 PISLMTLVDKDKQWFKSKIG-LQISETRRDWSFC--THAIKENSPLIIHDAFQDERFINN 102
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+V G P +RFY G PL S+G+++GTLC D KP + ++ L++ +V LE
Sbjct: 103 PLVTGDPKIRFYAGFPLRNSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSKQIVSFLE 160
[219][TOP]
>UniRef100_A2BSU4 GAF domain-containing protein n=1 Tax=Prochlorococcus marinus str.
AS9601 RepID=A2BSU4_PROMS
Length = 249
Score = 73.6 bits (179), Expect = 7e-12
Identities = 41/118 (34%), Positives = 65/118 (55%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P +L+ L D + + + G + + WSFC T A + + ++I DA +D RF NN
Sbjct: 46 PISLMTLVDKDKQWFKSKIG-LQISETRRDWSFC--THAIKENSPLIIHDAFQDERFINN 102
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+V G P +RFY G PL S+G+++GTLC D KP + ++ L++ +V LE
Sbjct: 103 PLVTGDPKIRFYAGFPLRNSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSKQIVSFLE 160
[220][TOP]
>UniRef100_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1
Tax=Vibrio furnissii CIP 102972 RepID=C9PLR8_VIBFU
Length = 1097
Score = 73.6 bits (179), Expect = 7e-12
Identities = 44/132 (33%), Positives = 69/132 (52%), Gaps = 2/132 (1%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEG--AFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKD 175
+F+ P L++L D R + + G A + G SFCG + ++ I+++ DA KD
Sbjct: 41 VFKVPICLISLVDSDRQWFKSKVGLDACETGR---DISFCGHAIL--HEDILIVSDATKD 95
Query: 176 ARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVV 355
RF +N +V P +RFY G PL ++G IGTLC D R+F A L A++V
Sbjct: 96 ERFSSNPLVTHAPHIRFYAGAPLRETSGQPIGTLCLIDSVARDFSAKEQQELREFADMVE 155
Query: 356 RHLEKDIALQLR 391
+ K+ +L+
Sbjct: 156 YEIAKEDQARLQ 167
[221][TOP]
>UniRef100_B9P3H6 GAF domain-containing protein n=1 Tax=Prochlorococcus marinus str.
MIT 9202 RepID=B9P3H6_PROMA
Length = 249
Score = 73.6 bits (179), Expect = 7e-12
Identities = 41/118 (34%), Positives = 65/118 (55%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P +L+ L D + + + G + + WSFC T A + + ++I DA +D RF NN
Sbjct: 46 PISLMTLVDKDKQWFKSKIG-LQISETRRDWSFC--THAIKENSPLIIHDAFQDERFINN 102
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+V G P +RFY G PL S+G+++GTLC D KP + ++ L++ +V LE
Sbjct: 103 PLVTGDPKIRFYAGFPLRNSDGNKLGTLCVIDRKPGNLTTQQFNIMELLSKQIVSFLE 160
[222][TOP]
>UniRef100_A4C1I1 Sensor protein n=1 Tax=Polaribacter irgensii 23-P
RepID=A4C1I1_9FLAO
Length = 399
Score = 73.6 bits (179), Expect = 7e-12
Identities = 43/118 (36%), Positives = 63/118 (53%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P ALV++ + + + G + + P +SFC ++ + D++ +I DA KD RF NN
Sbjct: 45 PIALVSIIGKNKQWFKSHHGLAAK-ETPREFSFCAHSILN-TDELFIINDATKDDRFANN 102
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+ G P V FY G PL +S G +GTLC D KP + + L LA+ VV LE
Sbjct: 103 PLTIGAPNVVFYAGAPLNSSEGFPLGTLCVIDNKPNALNKRQQQSLKLLAKQVVNLLE 160
[223][TOP]
>UniRef100_UPI0000382D47 COG2203: FOG: GAF domain n=1 Tax=Magnetospirillum magnetotacticum
MS-1 RepID=UPI0000382D47
Length = 297
Score = 73.2 bits (178), Expect = 9e-12
Identities = 47/129 (36%), Positives = 63/129 (48%)
Frame = +2
Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
E P A+V L D R F + G R + P SFC A + + IPDA D RF
Sbjct: 43 ETPIAVVNLVGDGRQFFKAEVGLGVR-ETPLDTSFC--RHAILEEDFLYIPDAASDPRFA 99
Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
N +V G PG+RFY G L + GH +GT+C D KP + + L LA + +E
Sbjct: 100 GNPLVTGEPGLRFYAGALLKTAEGHPVGTVCVLDTKPHDLTERQRKGLVRLARQTMAQME 159
Query: 368 KDIALQLRA 394
AL+ +A
Sbjct: 160 LRRALREQA 168
[224][TOP]
>UniRef100_Q8PIT5 Putative uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv.
citri RepID=Q8PIT5_XANAC
Length = 356
Score = 73.2 bits (178), Expect = 9e-12
Identities = 45/124 (36%), Positives = 63/124 (50%)
Frame = +2
Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
E A V L D+ R + + A GA R + P SFC + R D+++++ D L D RF
Sbjct: 43 ETQMAAVVLVDEDRQWFKSAHGA-PRSEAPRDISFCAHAIL-RPDEVLMVDDTLLDPRFH 100
Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+N MV G GVRFY G PL+ S G +G+LC D P + L L+ + LE
Sbjct: 101 DNPMVVGSGGVRFYAGAPLVTSQGMALGSLCVFDQAPAHLREDQREALQALSRQASQLLE 160
Query: 368 KDIA 379
+A
Sbjct: 161 LRLA 164
[225][TOP]
>UniRef100_B1XP38 Sensor protein n=1 Tax=Synechococcus sp. PCC 7002
RepID=B1XP38_SYNP2
Length = 412
Score = 73.2 bits (178), Expect = 9e-12
Identities = 43/117 (36%), Positives = 63/117 (53%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F L++L DD R + + A+ + P SFCG A + I IPD L D R
Sbjct: 41 LFGVKIVLISLVDDCRQWFK-AKVGLAASETPRNISFCGH--AIQRADIFEIPDTLADER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELV 352
F +N +V G P +RFY G P+ + +G+ +GTLC D +PR+ A+ +L LA V
Sbjct: 98 FWDNPLVTGKPYIRFYAGHPIRSGDGYPLGTLCLIDEQPRKLTATERELLQMLAHQV 154
[226][TOP]
>UniRef100_Q2CFM6 Sensor protein n=1 Tax=Oceanicola granulosus HTCC2516
RepID=Q2CFM6_9RHOB
Length = 404
Score = 73.2 bits (178), Expect = 9e-12
Identities = 47/125 (37%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P A V++ + R + + G + + P SFC T+ S + MV+PD +D R
Sbjct: 41 LFDCPIAHVSVVEQSRQWYKSVVG-IELSEMPKDNSFCTHTIMS--GEPMVVPDLSRDPR 97
Query: 182 FCNNEMV-RGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASR-CVVLNNLAELVV 355
F ++ MV GGP RFY G PL+ S+G R G+LC D P R L L E VV
Sbjct: 98 FVDHPMVAEGGPQARFYAGVPLVLSSGFRFGSLCVLDFVPHAAPGEREMAALTALGEAVV 157
Query: 356 RHLEK 370
LEK
Sbjct: 158 AALEK 162
[227][TOP]
>UniRef100_B9ZM74 Sensor protein n=1 Tax=Thioalkalivibrio sp. K90mix
RepID=B9ZM74_9GAMM
Length = 697
Score = 73.2 bits (178), Expect = 9e-12
Identities = 46/148 (31%), Positives = 69/148 (46%)
Frame = +2
Query: 5 FEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARF 184
F+ P A V L D++ +G G SFC + +R ++++V+ DA +DARF
Sbjct: 41 FDVPMATVTLVDEKCQCFIAPQGPLGAGT-ERSISFCAHGL-TRPNELLVVEDARQDARF 98
Query: 185 CNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHL 364
+N +V G VRFY G PL G +G LC D +PR D L E+ L
Sbjct: 99 SDNPLVLGETDVRFYAGIPLAPEAGLAVGNLCIIDTRPRRLDEQEVTALREFGEIATSLL 158
Query: 365 EKDIALQLRAHDNNSLAAAYGXLRRTLD 448
+ +A + H ++L A L L+
Sbjct: 159 REYLARRDLGHSRSALDAQGQRLAAVLE 186
[228][TOP]
>UniRef100_B9XKZ0 Putative GAF sensor protein n=1 Tax=bacterium Ellin514
RepID=B9XKZ0_9BACT
Length = 218
Score = 73.2 bits (178), Expect = 9e-12
Identities = 48/151 (31%), Positives = 71/151 (47%), Gaps = 3/151 (1%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I EAP AL+ L D+ R + + G SFC + ++ ++V+ DA KD R
Sbjct: 40 ICEAPVALITLVDENRQWFKSKVG-IDLNQTSRDISFCAHAIL--HEDVLVVADASKDKR 96
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F N +V P +RFY G PLI +G +GTLC D KP + + L L+ V+
Sbjct: 97 FAKNPLVVSEPRIRFYAGAPLITPDGQALGTLCVLDKKPHKITPDQKRALEILSRHVMTQ 156
Query: 362 LE---KDIALQLRAHDNNSLAAAYGXLRRTL 445
LE + + L D++ + RR L
Sbjct: 157 LELRRRSLELAKTRKDHDKVLKELEAARRKL 187
[229][TOP]
>UniRef100_A1ZHX4 Serine/threonine protein kinases n=1 Tax=Microscilla marina ATCC
23134 RepID=A1ZHX4_9SPHI
Length = 444
Score = 73.2 bits (178), Expect = 9e-12
Identities = 42/138 (30%), Positives = 69/138 (50%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I P +L++L + + + + G R + P +FC A ++ ++ DA KD R
Sbjct: 41 ICSTPISLMSLVAENKQWFKAKVGLEAR-ETPRELAFCAH--AIHRPELFIVEDATKDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +V G P +RFY G PL +G +GTLC D +PR+ ++ L LA +
Sbjct: 98 FHDNPLVTGHPDIRFYAGMPLTTPDGFSLGTLCVIDKRPRDLTEAQKTALKTLASQAIAQ 157
Query: 362 LEKDIALQLRAHDNNSLA 415
LE + L++ S+A
Sbjct: 158 LELRMKLRVIESKQKSIA 175
[230][TOP]
>UniRef100_A5CUL8 Putative uncharacterized protein n=1 Tax=Clavibacter michiganensis
subsp. michiganensis NCPPB 382 RepID=A5CUL8_CLAM3
Length = 417
Score = 72.0 bits (175), Expect(2) = 9e-12
Identities = 44/121 (36%), Positives = 61/121 (50%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P A + L DD F + + A SFC +A R+ I+V+PDA +DAR
Sbjct: 62 VFGVPVAEINLVDDAEQFTKSPQPAGVSLLSDRTQSFCD--VAIRSSDILVVPDATQDAR 119
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F V G +RFY G PL+ S G +GTLC D +PRE + +L+ + V R
Sbjct: 120 FAERTTVTGPRHIRFYAGRPLL-SGGQTVGTLCLVDTEPRELAPDQEKLLDEMGAWVERE 178
Query: 362 L 364
L
Sbjct: 179 L 179
Score = 21.2 bits (43), Expect(2) = 9e-12
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 421 LWQXSPHAGLLRPLRRAGG 477
LW AG+ RP R GG
Sbjct: 202 LWPDFDLAGISRPARGVGG 220
[231][TOP]
>UniRef100_Q8YQQ8 Sensor protein n=1 Tax=Nostoc sp. PCC 7120 RepID=Q8YQQ8_ANASP
Length = 1550
Score = 72.8 bits (177), Expect = 1e-11
Identities = 40/118 (33%), Positives = 58/118 (49%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P AL++L D R + + G +R + P +FC T+ + ++PDA D RF N
Sbjct: 44 PIALISLIDQNRQWFKATFG-LERRETPRDEAFCAHTILE--SEAFIVPDATADERFATN 100
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+V P +RFY G PL G+ +GTLC D PR + L L V++ LE
Sbjct: 101 PLVISDPKIRFYAGVPLTNPEGYSLGTLCVIDYIPRNLSFEQIEALQILGRQVIKQLE 158
[232][TOP]
>UniRef100_Q7V0A0 GAF domain n=1 Tax=Prochlorococcus marinus subsp. pastoris str.
CCMP1986 RepID=Q7V0A0_PROMP
Length = 250
Score = 72.8 bits (177), Expect = 1e-11
Identities = 41/118 (34%), Positives = 64/118 (54%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P +L+ L D + + + G + + WSFC T A + + ++I DA +D RF NN
Sbjct: 47 PISLMTLVDKDKQWFKSKVG-LEINETKRDWSFC--THAIQENSPLIIQDAFQDERFINN 103
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+V G P +RFY G PL +G+++GTLC D KP + V+ L++ +V LE
Sbjct: 104 PLVTGDPKIRFYAGFPLKNRDGNKLGTLCVIDRKPGNLSLKQFNVMELLSKQIVAFLE 161
[233][TOP]
>UniRef100_Q3BRB1 Putative sensor protein n=1 Tax=Xanthomonas campestris pv.
vesicatoria str. 85-10 RepID=Q3BRB1_XANC5
Length = 375
Score = 72.8 bits (177), Expect = 1e-11
Identities = 45/124 (36%), Positives = 63/124 (50%)
Frame = +2
Query: 8 EAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFC 187
E A V L D+ R + + A GA R + P SFC + R D+++++ D L D RF
Sbjct: 62 ETQMAAVVLVDEDRQWFKSAHGA-PRSEAPRDISFCAHAIL-RPDEVLMVDDTLLDPRFH 119
Query: 188 NNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+N MV G GVRFY G PL+ S G +G+LC D P + L L+ + LE
Sbjct: 120 DNPMVVGSGGVRFYAGAPLVTSQGLALGSLCVFDQTPAHLREDQREALQALSRQASQLLE 179
Query: 368 KDIA 379
+A
Sbjct: 180 LRLA 183
[234][TOP]
>UniRef100_B2FHL0 Putative GGDEF and GAF signalling protein n=1 Tax=Stenotrophomonas
maltophilia K279a RepID=B2FHL0_STRMK
Length = 356
Score = 72.8 bits (177), Expect = 1e-11
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 1/127 (0%)
Frame = +2
Query: 20 ALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEM 199
A V L D R + + +G + S CG + + QIMV+ DAL+D RF +N +
Sbjct: 47 AAVTLIDVERQWFKSIQGIDAAENLRSE-SMCGHAILQPH-QIMVVEDALQDIRFHDNPV 104
Query: 200 VRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE-KDI 376
V G P +RFY G PLI+S+G +GTLC D +P+ + + L L+ V+ +E +
Sbjct: 105 VTGDPHIRFYAGAPLISSDGLPLGTLCVFDAQPQHLPSDKAEALAALSRQVMLVMELRRF 164
Query: 377 ALQLRAH 397
AL ++ H
Sbjct: 165 ALDIQKH 171
[235][TOP]
>UniRef100_C4ZL18 Response regulator receiver modulated diguanylate
cyclase/phosphodiesterase n=1 Tax=Thauera sp. MZ1T
RepID=C4ZL18_THASP
Length = 737
Score = 72.8 bits (177), Expect = 1e-11
Identities = 44/122 (36%), Positives = 60/122 (49%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
I EAP +++L D R + + G + SFC + D + + DA D R
Sbjct: 157 IAEAPVGVISLVDTHRQWFKARVGVEVQTTSR-SVSFCAHALLG--DGLFEVEDATLDPR 213
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F +N +VRG PG+RFY G PL+ G +GTLC D +PR A+ L LA V
Sbjct: 214 FADNPLVRGDPGIRFYAGMPLVMPGGEVVGTLCVIDSRPRRLGATAREALAVLARSVTDE 273
Query: 362 LE 367
LE
Sbjct: 274 LE 275
[236][TOP]
>UniRef100_A8TQ70 Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain
n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQ70_9PROT
Length = 273
Score = 72.8 bits (177), Expect = 1e-11
Identities = 50/159 (31%), Positives = 78/159 (49%), Gaps = 1/159 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P L++L D R + + A + P SFCG + + ++V+ DA KD R
Sbjct: 41 LFRVPICLISLVDKDRQWFK-ARAGLDATETPRDISFCGHAILEHD--VLVVLDATKDER 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358
F +N +V GGP +RFY G P+ NG+ IGT+C + RE F L LA + V
Sbjct: 98 FHDNPLVVGGPEIRFYAGAPISLPNGYNIGTVCIISPEVRETFTKDEARQLAGLAGVAV- 156
Query: 359 HLEKDIALQLRAHDNNSLAAAYGXLRRTLDCFDHCVALV 475
I+++ + + + L+R L+ D VAL+
Sbjct: 157 ---SAISVRALRREMDRERSEKERLQRALESVDQPVALL 192
[237][TOP]
>UniRef100_A0ZB66 Sensor protein n=1 Tax=Nodularia spumigena CCY9414
RepID=A0ZB66_NODSP
Length = 1508
Score = 72.8 bits (177), Expect = 1e-11
Identities = 38/118 (32%), Positives = 60/118 (50%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P ALV+L D R + + G + + P +FC + ++ + ++PD D RF +N
Sbjct: 44 PIALVSLVDTNRQWFKSKVG-LEAPETPRDLAFCAHAILQKD--VFIVPDTTTDKRFADN 100
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
+V P +RFY G PL + G+ +GTLC D PR + + L L V++ LE
Sbjct: 101 PLVTSDPNIRFYAGVPLTNAEGYSLGTLCVIDRVPRNLTSEQVEALRILGNQVIKQLE 158
[238][TOP]
>UniRef100_A7TD30 Predicted protein (Fragment) n=1 Tax=Nematostella vectensis
RepID=A7TD30_NEMVE
Length = 138
Score = 72.8 bits (177), Expect = 1e-11
Identities = 37/96 (38%), Positives = 54/96 (56%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P ALV+L D R + + G + + P +FC + +R ++ ++PDA KD RF +N
Sbjct: 45 PIALVSLIDSNRQWFKSRYG-LEATETPRDLAFCAHAI-NRPYELFIVPDATKDKRFHDN 102
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR 301
+ G P V+FY G PL G+ +GTLC D KPR
Sbjct: 103 PLTTGDPNVKFYAGVPLNTKEGYSLGTLCVIDTKPR 138
[239][TOP]
>UniRef100_UPI0001693532 histidine kinase-response regulator hybrid protein n=1
Tax=Xanthomonas oryzae pv. oryzicola BLS256
RepID=UPI0001693532
Length = 860
Score = 72.4 bits (176), Expect = 1e-11
Identities = 46/119 (38%), Positives = 58/119 (48%)
Frame = +2
Query: 11 APAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCN 190
AP ALV+L D R + + G + + P SFC + A ++M +PDA D RF N
Sbjct: 48 APMALVSLLDANRQWFKARCGTDLK-ETPRSASFC--SHAIMGTELMEVPDAEADPRFVN 104
Query: 191 NEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLE 367
N +V PGVR Y G PLI G+ GTLC PR D + L LA LE
Sbjct: 105 NPLVVAAPGVRSYVGVPLIGREGYAYGTLCTLSTTPRVLDEQQKQALIRLAHQAANQLE 163
[240][TOP]
>UniRef100_C6XAD7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1
Tax=Methylovorus sp. SIP3-4 RepID=C6XAD7_METSD
Length = 640
Score = 72.4 bits (176), Expect = 1e-11
Identities = 44/125 (35%), Positives = 64/125 (51%)
Frame = +2
Query: 14 PAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNN 193
P AL++L D R + + G + + P +FC + MV+ DAL D RF +N
Sbjct: 45 PIALISLVDTDRQWFKSRIGV-EAEESPRDVAFCAHAILQTKP--MVVNDALLDERFADN 101
Query: 194 EMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRHLEKD 373
MV P +RFY G P+ + G+ +GTLC D +PRE +L LA+LV + +
Sbjct: 102 PMVLQFPNIRFYAGIPIRTTAGYALGTLCAIDAQPRELSKHEMEILTCLADLVSKEIRLR 161
Query: 374 IALQL 388
AL L
Sbjct: 162 EALAL 166
[241][TOP]
>UniRef100_B7KRQ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(S) n=1 Tax=Methylobacterium chloromethanicum CM4
RepID=B7KRQ5_METC4
Length = 1423
Score = 72.4 bits (176), Expect = 1e-11
Identities = 43/121 (35%), Positives = 65/121 (53%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P A V+L + + G P SFC +T+ S +++V+ DA +D R
Sbjct: 39 LFDVPIAYVSLVGETEQRFKGKCGLGAEAT-PREISFCTYTILSH--EVLVVEDATQDER 95
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F N +V G P +RFY G PL+ S+G +G+LC D R F A + L +LA++VV
Sbjct: 96 FSANPLVIGKPHIRFYAGAPLVLSSGIHLGSLCLIDRVSRPFSAEQQERLRDLAQIVVVQ 155
Query: 362 L 364
L
Sbjct: 156 L 156
[242][TOP]
>UniRef100_B0UPP1 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(S) n=1 Tax=Methylobacterium sp. 4-46
RepID=B0UPP1_METS4
Length = 740
Score = 72.4 bits (176), Expect = 1e-11
Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 1/123 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P A V L + +++ G P SFC T+ S D++MV+PDA +D R
Sbjct: 54 LFGTPWAAVTLIGEDTQWLKARHG-LDLPRTPRSVSFCTHTIES--DEVMVVPDASRDPR 110
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPR-EFDASRCVVLNNLAELVVR 358
F +N +VRG +RFY G PL+ +G RIG +C D PR DA+ L +LA L++
Sbjct: 111 FRDNPLVRGDLALRFYAGAPLVTPSGARIGAICVLDHAPRPALDAAGRGRLADLARLMMT 170
Query: 359 HLE 367
L+
Sbjct: 171 QLD 173
[243][TOP]
>UniRef100_A1WW32 Sensor protein n=1 Tax=Halorhodospira halophila SL1
RepID=A1WW32_HALHL
Length = 437
Score = 72.4 bits (176), Expect = 1e-11
Identities = 41/122 (33%), Positives = 62/122 (50%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF+ P A ++L + R + + A G + P +FC + + + +V+ D D R
Sbjct: 41 IFDVPIAFISLIERERQWFKAARGLGIE-ETPREIAFCNCVIQTGDP--LVVTDTHADPR 97
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
F ++ +V G P +RFY G PL+ G RIGTLC D + R + L LAE+VV
Sbjct: 98 FADHPLVTGPPHLRFYAGVPLVVEGGARIGTLCLGDRQARTLSDAELATLQELAEVVVDE 157
Query: 362 LE 367
E
Sbjct: 158 FE 159
[244][TOP]
>UniRef100_Q0FTL1 Putative signal transduction histidine kinase with GAF domain n=1
Tax=Roseovarius sp. HTCC2601 RepID=Q0FTL1_9RHOB
Length = 394
Score = 72.4 bits (176), Expect = 1e-11
Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 1/129 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+ + P AL++L D+ R + R G F+ + P S C + D I+ I D L DAR
Sbjct: 41 MLDMPVALISLVDEDRQWFRARHG-FEPSETPLEQSICAHAILG--DDILEIEDTLDDAR 97
Query: 182 FCNNEMVRGGPG-VRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVR 358
+N + G +R+Y G PLI +GH IG+LC D KPR+ ++ +L ++ V+R
Sbjct: 98 TADNPLCCGVLAEMRYYAGAPLITRSGHSIGSLCVLDTKPRKLTPAQRQLLMVMSRQVIR 157
Query: 359 HLEKDIALQ 385
L+ AL+
Sbjct: 158 QLDLQRALK 166
[245][TOP]
>UniRef100_D0D1R8 Signal transduction histidine kinase n=1 Tax=Citreicella sp. SE45
RepID=D0D1R8_9RHOB
Length = 390
Score = 72.4 bits (176), Expect = 1e-11
Identities = 45/129 (34%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+ + P AL++L D+ R + R G F+ + P S C + A D I+ I D L D R
Sbjct: 41 MLDMPVALISLVDENRQWFRARHG-FEPAETPLGQSIC--SHAILEDDILEIEDTLLDLR 97
Query: 182 FCNNEMVRGG-PGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVR 358
+N + G +RFY G PL+ GHRIG+LC D +PR+ A++ +L +A V+R
Sbjct: 98 SADNPLCCGLLADMRFYAGAPLVTRTGHRIGSLCVLDRRPRKLTAAQRKLLTVMAGQVMR 157
Query: 359 HLEKDIALQ 385
L+ + L+
Sbjct: 158 QLDLERTLK 166
[246][TOP]
>UniRef100_B4UYH5 Magnesium or manganese-dependent protein phosphatase n=1
Tax=Streptomyces sp. Mg1 RepID=B4UYH5_9ACTO
Length = 441
Score = 72.4 bits (176), Expect = 1e-11
Identities = 48/148 (32%), Positives = 70/148 (47%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
IF+AP A VA+ D R++ + G + P A +DQ V+ DAL D R
Sbjct: 49 IFDAPMATVAIVDSDRVWFKATHGLEGVREIPRDPGLTA--CAVPHDQPYVVTDALTDPR 106
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLNNLAELVVRH 361
+V G PGVRFY P+I +G+R+G++ D +PR + L +LA LV+
Sbjct: 107 TAAGPLVHGWPGVRFYAAAPIITVDGYRLGSVNVLDTRPRRPTDVQIATLQDLAALVMDE 166
Query: 362 LEKDIALQLRAHDNNSLAAAYGXLRRTL 445
LE ++ + A L RTL
Sbjct: 167 LELRLSARRTVAAERERRADAERLARTL 194
[247][TOP]
>UniRef100_A3SGP0 Sensor protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SGP0_9RHOB
Length = 355
Score = 72.4 bits (176), Expect = 1e-11
Identities = 45/118 (38%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Frame = +2
Query: 32 LFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDARFCNNEMV-RG 208
+++D +I + A G ++G+ P R S C +T+ S D+ M++ D D +F N+ MV G
Sbjct: 1 MYEDSQI-LPSAVG-IEKGEVPRRISLCSFTIMS--DEPMIVSDLSLDPKFSNHPMVVEG 56
Query: 209 GPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCV-VLNNLAELVVRHLEKDIA 379
GP RFY G PL+ S+G R+G+LC DVKP + + R + +L L + VV E+ A
Sbjct: 57 GPEYRFYVGVPLVLSSGFRLGSLCALDVKPHDKPSVRQIALLEELGKAVVAIFEQHSA 114
[248][TOP]
>UniRef100_B7FUD4 Light histidine kinase n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7FUD4_PHATR
Length = 850
Score = 72.4 bits (176), Expect = 1e-11
Identities = 52/167 (31%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F+ P ALV+L D RI+ G + P + SFC + S N + ++PDA KD+R
Sbjct: 108 MFDVPIALVSLVDLGRIWCISNRGLGEVRQIPRKDSFCAHAVLS-NSKSFIVPDASKDSR 166
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREFDASRCVVLN-------NL 340
F N +V G G+RFY G PL +RIG C KPR S ++ +
Sbjct: 167 FSTNPLVTEG-GIRFYGGAPLETPENYRIGNFCLLGTKPRPEGLSEAELMTLVDFAAMAV 225
Query: 341 AELVVRHLEKDIALQ---LRAHDNNSLAAAYGXLRRTLDCFDHCVAL 472
LV R +D ++ + AH + L L+ +L+ + V+L
Sbjct: 226 KVLVDRRYRRDTEIKQDLIVAHTAHDLITPLTGLQMSLNLLNEDVSL 272
[249][TOP]
>UniRef100_Q4P540 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4P540_USTMA
Length = 2065
Score = 72.4 bits (176), Expect = 1e-11
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Frame = +2
Query: 107 SFCGWTMASRNDQIMVIPDALKDARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFA 286
SFC + +D+ +VI DA KD RF N +V+G P +RFY G+PL S+G IG+LC
Sbjct: 860 SFCSHAILQDSDEPIVILDAAKDWRFSGNPLVQGSPDIRFYAGSPLRTSDGLNIGSLCLI 919
Query: 287 DVKPR-EFDASRCVVLNNLAELVVRHLE 367
D KPR +F + L + +V+R +E
Sbjct: 920 DDKPRTDFGPRQRHTLREFSRVVMREME 947
[250][TOP]
>UniRef100_C1D3W6 Putative response regulator n=1 Tax=Deinococcus deserti VCD115
RepID=C1D3W6_DEIDV
Length = 592
Score = 72.0 bits (175), Expect = 2e-11
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 1/158 (0%)
Frame = +2
Query: 2 IFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTMASRNDQIMVIPDALKDAR 181
+F P A++ L D+++I+ + G K G + C T+ S Q+MV+PDA ++ R
Sbjct: 40 LFSVPYAMINLIDEQQIWAKACFGT-KTGSLTREHAPCVRTIEST--QVMVVPDARQNHR 96
Query: 182 FCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPRE-FDASRCVVLNNLAELVVR 358
F ++ V G+RFY G PL+ +G+ IGTLC D +PR L +LA LV+
Sbjct: 97 FASHG-VMAEHGLRFYAGAPLVTHDGYSIGTLCLLDEQPRTGLSDEESSTLQDLAALVMD 155
Query: 359 HLEKDIALQLRAHDNNSLAAAYGXLRRTLDCFDHCVAL 472
LE +A A D + + + D H A+
Sbjct: 156 ELELRLAQLTLARDAKAKSQMLTRMTGAADHAQHLAAV 193