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[1][TOP]
>UniRef100_A8I9Z6 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8I9Z6_CHLRE
Length = 1634
Score = 58.5 bits (140), Expect(2) = 2e-16
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHNSLWGIFCPA + +G V LVKNMALMCYITV
Sbjct: 520 QLHNSLWGIFCPA-ETPEGQAVGLVKNMALMCYITV 554
Score = 50.4 bits (119), Expect(2) = 2e-16
Identities = 40/79 (50%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +3
Query: 105 SVCTPSLPVVAHLE*VQHVSALDECDALPTSPASTKVFINCACGWASSATPPCSS-RT*G 281
+V TPSLPVVAHLE + ALDE + ASTKVFIN W P + +
Sbjct: 553 TVGTPSLPVVAHLEEF-NTEALDEVTPADIA-ASTKVFINGV--WLGIQRDPTALIKNLR 608
Query: 282 PCA*QVAFSTEVAIIYDVP 338
QVAFSTEVAIIYD P
Sbjct: 609 AMRRQVAFSTEVAIIYDGP 627
[2][TOP]
>UniRef100_Q1L5X1 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=Q1L5X1_CHLRE
Length = 1607
Score = 58.5 bits (140), Expect(2) = 2e-16
Identities = 28/36 (77%), Positives = 30/36 (83%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHNSLWGIFCPA + +G V LVKNMALMCYITV
Sbjct: 493 QLHNSLWGIFCPA-ETPEGQAVGLVKNMALMCYITV 527
Score = 50.4 bits (119), Expect(2) = 2e-16
Identities = 40/79 (50%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +3
Query: 105 SVCTPSLPVVAHLE*VQHVSALDECDALPTSPASTKVFINCACGWASSATPPCSS-RT*G 281
+V TPSLPVVAHLE + ALDE + ASTKVFIN W P + +
Sbjct: 526 TVGTPSLPVVAHLEEF-NTEALDEVTPADIA-ASTKVFINGV--WLGIQRDPTALIKNLR 581
Query: 282 PCA*QVAFSTEVAIIYDVP 338
QVAFSTEVAIIYD P
Sbjct: 582 AMRRQVAFSTEVAIIYDGP 600
[3][TOP]
>UniRef100_B4UWL3 DNA-dependent RNA polymerase II second largest subunit (Fragment)
n=1 Tax=Boreoplaca ultrafrigida RepID=B4UWL3_9LECA
Length = 358
Score = 47.8 bits (112), Expect(2) = 1e-08
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCY+TV
Sbjct: 98 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYVTV 132
Score = 34.7 bits (78), Expect(2) = 1e-08
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ R+P L++N++A+R G + H G +R R R IF
Sbjct: 170 VWVGVHREPHHLVQNVQALRRNGLISH-GVSLVRDVRDREFKIF 212
[4][TOP]
>UniRef100_A7XQS7 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Botrytis aclada RepID=A7XQS7_9HELO
Length = 355
Score = 47.8 bits (112), Expect(3) = 2e-08
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCY+TV
Sbjct: 94 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYVTV 128
Score = 28.1 bits (61), Expect(3) = 2e-08
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+K ++ +R + + H +R R R IF
Sbjct: 166 VWVGIHRDPAHLVKCVQDLRRSHLISHEVS-LIREIRDREFKIF 208
Score = 25.4 bits (54), Expect(3) = 2e-08
Identities = 15/40 (37%), Positives = 26/40 (65%)
Frame = +3
Query: 105 SVCTPSLPVVAHLE*VQHVSALDECDALPTSPASTKVFIN 224
+V TPS P+V + +++ L+E + P +P +TKVF+N
Sbjct: 127 TVGTPSDPIVEFMI-QRNMEVLEEYEP-PRAPNATKVFVN 164
[5][TOP]
>UniRef100_C5PAW2 DNA-directed RNA polymerase n=1 Tax=Coccidioides posadasii C735
delta SOWgp RepID=C5PAW2_COCP7
Length = 1258
Score = 48.1 bits (113), Expect(3) = 2e-08
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 536 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 570
Score = 28.5 bits (62), Expect(3) = 2e-08
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQH 310
VW+G+ RDP+ L+ ++++R + H
Sbjct: 608 VWVGVHRDPSHLVSTVQSLRRRNMISH 634
Score = 24.3 bits (51), Expect(3) = 2e-08
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +3
Query: 105 SVCTPSLPVVAHLE*VQHVSALDECDALPTSPASTKVFIN 224
+V TPS P++ + +++ L+E + SP STK+F+N
Sbjct: 569 TVGTPSEPIIDFMI-QRNMEVLEEFEP-QVSPNSTKIFVN 606
[6][TOP]
>UniRef100_Q1DPF0 DNA-directed RNA polymerase n=1 Tax=Coccidioides immitis
RepID=Q1DPF0_COCIM
Length = 1152
Score = 48.1 bits (113), Expect(3) = 2e-08
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 483 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 517
Score = 28.5 bits (62), Expect(3) = 2e-08
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQH 310
VW+G+ RDP+ L+ ++++R + H
Sbjct: 555 VWVGVHRDPSHLVSTVQSLRRRNMISH 581
Score = 24.3 bits (51), Expect(3) = 2e-08
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +3
Query: 105 SVCTPSLPVVAHLE*VQHVSALDECDALPTSPASTKVFIN 224
+V TPS P++ + +++ L+E + SP STK+F+N
Sbjct: 516 TVGTPSEPIIDFMI-QRNMEVLEEFEP-QVSPNSTKIFVN 553
[7][TOP]
>UniRef100_Q1L6C3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Homalocladium
platycladum RepID=Q1L6C3_9CARY
Length = 875
Score = 50.8 bits (120), Expect(2) = 3e-08
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 399 QLHNSQWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWSTEN 451
Score = 30.4 bits (67), Expect(2) = 3e-08
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI RDP +L+K LR +R
Sbjct: 473 WVGIHRDPDLLVKTLRQLR 491
[8][TOP]
>UniRef100_Q5US69 DNA-directed RNA polymerase (Fragment) n=1 Tax=Lecanora concolor
RepID=Q5US69_9LECA
Length = 708
Score = 48.1 bits (113), Expect(2) = 3e-08
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 108 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 142
Score = 33.1 bits (74), Expect(2) = 3e-08
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ R+P L+ N++A+R G + H +R R R IF
Sbjct: 180 VWVGVHREPAHLVSNVQALRRNGLISHEVS-LVRDVRDREFKIF 222
[9][TOP]
>UniRef100_Q1L6D8 DNA-directed RNA polymerase (Fragment) n=2 Tax=Dianthus
RepID=Q1L6D8_DIACA
Length = 674
Score = 50.8 bits (120), Expect(2) = 3e-08
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 122 QLHNSQWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWSTEN 174
Score = 30.4 bits (67), Expect(2) = 3e-08
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI RDP +L+K LR +R
Sbjct: 195 WVGIHRDPDLLVKTLRELR 213
[10][TOP]
>UniRef100_B4UWK7 DNA-dependent RNA polymerase II second largest subunit (Fragment)
n=1 Tax=Lecanora polytropa RepID=B4UWK7_9LECA
Length = 362
Score = 48.1 bits (113), Expect(2) = 3e-08
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 102 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 136
Score = 33.1 bits (74), Expect(2) = 3e-08
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ R+P L+ N++A+R G + H +R R R IF
Sbjct: 174 VWVGVHREPAHLVSNVQALRRNGLISHEVS-LVRDVRDREFKIF 216
[11][TOP]
>UniRef100_A5H2I1 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Lecanora achariana RepID=A5H2I1_9LECA
Length = 355
Score = 48.1 bits (113), Expect(2) = 3e-08
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 95 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 129
Score = 33.1 bits (74), Expect(2) = 3e-08
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ R+P L+ N++A+R G + H +R R R IF
Sbjct: 167 VWVGVHREPAHLVSNVQALRRNGLISHEVS-LVRDVRDREFKIF 209
[12][TOP]
>UniRef100_A6MND7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Arthroderma ciferrii
RepID=A6MND7_9EURO
Length = 703
Score = 48.1 bits (113), Expect(3) = 4e-08
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 111 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 145
Score = 27.3 bits (59), Expect(3) = 4e-08
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQH 310
VW+G+ RDP L+ ++++R + H
Sbjct: 183 VWVGVHRDPAHLVGTVQSLRRRNMISH 209
Score = 24.6 bits (52), Expect(3) = 4e-08
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 105 SVCTPSLPVVAHLE*VQHVSALDECDALPTSPASTKVFIN 224
+V TPS P++ + +++ L+E + SP STKVF+N
Sbjct: 144 TVGTPSEPIIDFMI-QRNMEVLEEFEP-QVSPNSTKVFVN 181
[13][TOP]
>UniRef100_UPI000180B7B7 PREDICTED: similar to POLR2B protein n=1 Tax=Ciona intestinalis
RepID=UPI000180B7B7
Length = 1173
Score = 53.9 bits (128), Expect(2) = 5e-08
Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHNSLWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNSLWGMICPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 26.6 bits (57), Expect(2) = 5e-08
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI RDP L+ LR +R
Sbjct: 573 WVGIHRDPEQLMNTLRKLR 591
[14][TOP]
>UniRef100_B4UWM9 DNA-dependent RNA polymerase II second largest subunit (Fragment)
n=1 Tax=Lecidella elaeochroma RepID=B4UWM9_9LECA
Length = 362
Score = 47.8 bits (112), Expect(2) = 5e-08
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCY+TV
Sbjct: 102 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYVTV 136
Score = 32.7 bits (73), Expect(2) = 5e-08
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ R+P L++N++A+R G + H +R R R IF
Sbjct: 174 VWVGVHREPHHLVQNVQALRRNGLISHEVS-LVRDVRDREFKIF 216
[15][TOP]
>UniRef100_B3FCH3 RNA polymerase beta (Fragment) n=1 Tax=Emericella quadrilineata
RepID=B3FCH3_9EURO
Length = 336
Score = 51.6 bits (122), Expect(2) = 5e-08
Identities = 23/37 (62%), Positives = 28/37 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVC 111
QLHN+ WG+ CPA + +G LVKN+ALMCYITVC
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITVC 127
Score = 28.9 bits (63), Expect(2) = 5e-08
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ R P+ L++ ++A+R + H +R R R IF
Sbjct: 164 VWVGVHRQPSHLVETMQALRRRNMISHEVS-LIRDIREREFKIF 206
[16][TOP]
>UniRef100_B4UWT0 DNA-dependent RNA polymerase II second largest subunit (Fragment)
n=1 Tax=Phlyctis argena RepID=B4UWT0_9LECA
Length = 359
Score = 48.1 bits (113), Expect(3) = 6e-08
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 100 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 134
Score = 26.6 bits (57), Expect(3) = 6e-08
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMR 289
VW+G+ RDP L+ ++++R
Sbjct: 172 VWVGVHRDPAHLVSTVQSLR 191
Score = 24.6 bits (52), Expect(3) = 6e-08
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +3
Query: 105 SVCTPSLPVVAHLE*VQHVSALDECDALPTSPASTKVFIN 224
+V +PS P++ ++ +++ L+E + SP STKVF+N
Sbjct: 133 TVGSPSEPIIEFMQ-QRNMEILEEYEPA-RSPNSTKVFVN 170
[17][TOP]
>UniRef100_Q1L6D7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dicentra formosa
RepID=Q1L6D7_9MAGN
Length = 873
Score = 49.7 bits (117), Expect(2) = 7e-08
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 399 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 451
Score = 30.4 bits (67), Expect(2) = 7e-08
Identities = 11/19 (57%), Positives = 16/19 (84%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LRA+R
Sbjct: 472 WVGIHRNPELLVKTLRALR 490
[18][TOP]
>UniRef100_B9RZ91 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
RepID=B9RZ91_RICCO
Length = 1194
Score = 49.3 bits (116), Expect(2) = 8e-08
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + W N
Sbjct: 506 QLHNSQWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTEN 558
Score = 30.4 bits (67), Expect(2) = 8e-08
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI RDP +L+K LR +R
Sbjct: 579 WVGIHRDPDMLVKTLRRLR 597
[19][TOP]
>UniRef100_P38420 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Arabidopsis
thaliana RepID=RPB2_ARATH
Length = 1188
Score = 49.3 bits (116), Expect(2) = 8e-08
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + W N
Sbjct: 504 QLHNSQWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTEN 556
Score = 30.4 bits (67), Expect(2) = 8e-08
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMR 289
+W+G+ RDP +L+K LR +R
Sbjct: 576 MWVGVHRDPDMLVKTLRRLR 595
[20][TOP]
>UniRef100_Q1L6E5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Callistemon
subulatus RepID=Q1L6E5_9MYRT
Length = 952
Score = 49.3 bits (116), Expect(2) = 8e-08
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + W N
Sbjct: 399 QLHNSQWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTEN 451
Score = 30.4 bits (67), Expect(2) = 8e-08
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI RDP +L+K LR +R
Sbjct: 472 WVGIHRDPDMLVKTLRRLR 490
[21][TOP]
>UniRef100_Q1L5B3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Astilbe sp.
Yoshikawa s.n. RepID=Q1L5B3_9MAGN
Length = 951
Score = 49.3 bits (116), Expect(2) = 8e-08
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + W N
Sbjct: 399 QLHNSQWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTEN 451
Score = 30.4 bits (67), Expect(2) = 8e-08
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI RDP +L+K LR +R
Sbjct: 472 WVGIHRDPDMLVKTLRRLR 490
[22][TOP]
>UniRef100_Q1L5A5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Linanthus
californicus RepID=Q1L5A5_9ERIC
Length = 733
Score = 49.3 bits (116), Expect(2) = 9e-08
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + W N
Sbjct: 45 QLHNSQWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTEN 97
Score = 30.4 bits (67), Expect(2) = 9e-08
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI RDP +L+K LR +R
Sbjct: 118 WVGIHRDPDMLVKTLRRLR 136
[23][TOP]
>UniRef100_A6MND5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Eupenicillium
javanicum RepID=A6MND5_9EURO
Length = 705
Score = 48.1 bits (113), Expect(2) = 9e-08
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 108 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 142
Score = 31.6 bits (70), Expect(2) = 9e-08
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDPT L+ ++++R + H +R R R IF
Sbjct: 180 VWVGIHRDPTHLVNTMQSLRRRNMISHEVS-LIRDIRDREFKIF 222
[24][TOP]
>UniRef100_Q5US55 DNA-directed RNA polymerase (Fragment) n=1 Tax=Placopsis perrugosa
RepID=Q5US55_9LECA
Length = 693
Score = 48.1 bits (113), Expect(2) = 9e-08
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 103 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 137
Score = 31.6 bits (70), Expect(2) = 9e-08
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP+ L+ ++++R G + H +R R R IF
Sbjct: 175 VWVGVHRDPSHLVSTVQSLRRRGMISHEVS-LIRDIRDREFKIF 217
[25][TOP]
>UniRef100_B9H2V2 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
RepID=B9H2V2_POPTR
Length = 690
Score = 49.3 bits (116), Expect(2) = 9e-08
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + W N
Sbjct: 503 QLHNSQWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTEN 555
Score = 30.4 bits (67), Expect(2) = 9e-08
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI RDP +L+K LR +R
Sbjct: 576 WVGIHRDPDMLVKTLRRLR 594
[26][TOP]
>UniRef100_A3RI50 DNA-directed RNA polymerase (Fragment) n=1 Tax=Eupenicillium
limosum RepID=A3RI50_9EURO
Length = 543
Score = 48.1 bits (113), Expect(2) = 9e-08
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 31 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 65
Score = 31.6 bits (70), Expect(2) = 9e-08
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDPT L+ ++++R + H +R R R IF
Sbjct: 103 VWVGIHRDPTHLVNTMQSLRRRNMISHEVS-LIRDIRDREFKIF 145
[27][TOP]
>UniRef100_B9U325 RNA polymerase beta (Fragment) n=1 Tax=Penicillium skrjabinii
RepID=B9U325_9EURO
Length = 337
Score = 48.1 bits (113), Expect(2) = 9e-08
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 31.6 bits (70), Expect(2) = 9e-08
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDPT L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPTHLVNTMQSLRRRNMISHEVS-LIRDIRDREFKIF 206
[28][TOP]
>UniRef100_B9U324 RNA polymerase beta (Fragment) n=1 Tax=Eupenicillium zonatum
RepID=B9U324_9EURO
Length = 337
Score = 48.1 bits (113), Expect(2) = 9e-08
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 31.6 bits (70), Expect(2) = 9e-08
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDPT L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPTHLVNTMQSLRRRNMISHEVS-LIRDIRDREFKIF 206
[29][TOP]
>UniRef100_B3FH81 RNA polymerase beta (Fragment) n=1 Tax=Eupenicillium brefeldianum
RepID=B3FH81_9EURO
Length = 337
Score = 48.1 bits (113), Expect(2) = 9e-08
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 31.6 bits (70), Expect(2) = 9e-08
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDPT L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPTHLVNTMQSLRRRNMISHEVS-LIRDIRDREFKIF 206
[30][TOP]
>UniRef100_Q6Q257 DNA-directed RNA polymerase (Fragment) n=1 Tax=Camellia japonica
RepID=Q6Q257_9ERIC
Length = 559
Score = 48.9 bits (115), Expect(2) = 1e-07
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + W N
Sbjct: 7 QLHNSQWGMMCPA-ETPEGQACGLVKNLALMVYITVGSXAYPILEFLEEWGTEN 59
Score = 30.4 bits (67), Expect(2) = 1e-07
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI RDP +L+K LR +R
Sbjct: 80 WVGIHRDPDMLVKTLRRLR 98
[31][TOP]
>UniRef100_B4UWT9 DNA-dependent RNA polymerase II second largest subunit (Fragment)
n=1 Tax=Placynthiella uliginosa RepID=B4UWT9_9LECA
Length = 361
Score = 48.1 bits (113), Expect(2) = 1e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 102 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 136
Score = 31.2 bits (69), Expect(2) = 1e-07
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP+ L+ ++++R G + H +R R R IF
Sbjct: 174 VWVGVHRDPSHLVSTVQSLRRKGLISHEVS-LIRDIRDREFKIF 216
[32][TOP]
>UniRef100_A5PFY7 DNA-directed RNA polymerase II polypeptide 2 (Fragment) n=1
Tax=Lecania sylvestris RepID=A5PFY7_9LECA
Length = 288
Score = 48.1 bits (113), Expect(2) = 1e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 74 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 108
Score = 31.2 bits (69), Expect(2) = 1e-07
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ R+P L+KN++ +R G L + +R R R IF
Sbjct: 146 VWVGVHREPADLVKNVKRLRRRGLLSYEVS-LVRDIRDREFKIF 188
[33][TOP]
>UniRef100_A9XZC7 Putative DNA-directed RNA polymerase II subunit 2 (Fragment) n=1
Tax=Mastigoproctus giganteus RepID=A9XZC7_MASGI
Length = 235
Score = 52.8 bits (125), Expect(2) = 1e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 41 QLHNTLWGMICPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 93
Score = 26.6 bits (57), Expect(2) = 1e-07
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI RDP L+ LR +R
Sbjct: 114 WVGIHRDPDQLMNTLRKLR 132
[34][TOP]
>UniRef100_B7QNH8 DNA-directed RNA polymerase n=1 Tax=Ixodes scapularis
RepID=B7QNH8_IXOSC
Length = 1142
Score = 52.4 bits (124), Expect(2) = 1e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMICPA-ETPEGHAVGLVKNLALMSYISVGSQPSPILEFLEEWSMEN 552
Score = 26.6 bits (57), Expect(2) = 1e-07
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI RDP L+ LR +R
Sbjct: 573 WVGIHRDPDQLMNTLRKLR 591
[35][TOP]
>UniRef100_Q6RYG6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sphaerophorus
globosus RepID=Q6RYG6_9LECA
Length = 903
Score = 48.1 bits (113), Expect(2) = 1e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 309 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 343
Score = 30.8 bits (68), Expect(2) = 1e-07
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ ++ +R G L H +R R R IF
Sbjct: 381 VWVGVHRDPAHLVSTVQNLRRRGHLSHEVS-LVRDIRDREFKIF 423
[36][TOP]
>UniRef100_Q5US44 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sphaerophorus
globosus RepID=Q5US44_9LECA
Length = 735
Score = 48.1 bits (113), Expect(2) = 1e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 115 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 149
Score = 30.8 bits (68), Expect(2) = 1e-07
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ ++ +R G L H +R R R IF
Sbjct: 187 VWVGVHRDPAHLVSTVQNLRRRGHLSHEVS-LVRDIRDREFKIF 229
[37][TOP]
>UniRef100_A7J5A8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Megalospora
tuberculosa RepID=A7J5A8_9LECA
Length = 718
Score = 46.6 bits (109), Expect(2) = 1e-07
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYI+V
Sbjct: 118 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYISV 152
Score = 32.3 bits (72), Expect(2) = 1e-07
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ DP +L+ N++ +R T + H +R R R IF
Sbjct: 190 VWVGVHHDPALLVSNVQELRRTNIIPHEAS-LVRDIRDREFKIF 232
[38][TOP]
>UniRef100_C0LJZ7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dactylospora
haliotrepha RepID=C0LJZ7_9LECA
Length = 586
Score = 48.1 bits (113), Expect(2) = 1e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 75 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 109
Score = 30.8 bits (68), Expect(2) = 1e-07
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDPT L+ + +R T + H G +R R R I+
Sbjct: 147 VWVGVHRDPTRLVNLVYHLRRTNTISHEVG-LVRDIRDREFKIY 189
[39][TOP]
>UniRef100_A5H2H0 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Erioderma verruculosum RepID=A5H2H0_9LECA
Length = 386
Score = 48.1 bits (113), Expect(2) = 1e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 108 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 142
Score = 30.8 bits (68), Expect(2) = 1e-07
Identities = 16/44 (36%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ N++++R + H +R R R IF
Sbjct: 180 VWVGIHRDPARLVSNVQSLRRRHWISHEVS-LVRDIRDREFKIF 222
[40][TOP]
>UniRef100_B4UWR4 DNA-dependent RNA polymerase II second largest subunit (Fragment)
n=1 Tax=Squamarina cartilaginea RepID=B4UWR4_9LECA
Length = 363
Score = 48.5 bits (114), Expect(2) = 1e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 103 QLHNTRWGLVCPA-ETPEGQACGLVKNLALMCYITV 137
Score = 30.4 bits (67), Expect(2) = 1e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ ++ +R G + H +R R R IF
Sbjct: 175 VWVGVHRDPAHLVGTVQNLRRKGNISHEVS-LIRDIRDREFKIF 217
[41][TOP]
>UniRef100_B4UWS2 DNA-dependent RNA polymerase II second largest subunit (Fragment)
n=1 Tax=Sphaerophorus globosus RepID=B4UWS2_9LECA
Length = 342
Score = 48.1 bits (113), Expect(2) = 1e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 82 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 116
Score = 30.8 bits (68), Expect(2) = 1e-07
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ ++ +R G L H +R R R IF
Sbjct: 154 VWVGVHRDPAHLVSTVQNLRRRGHLSHEVS-LVRDIRDREFKIF 196
[42][TOP]
>UniRef100_A9XZD5 Putative DNA-directed RNA polymerase II subunit 2 (Fragment) n=1
Tax=Tanystylum orbiculare RepID=A9XZD5_9CHEL
Length = 236
Score = 53.1 bits (126), Expect(2) = 1e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 41 QLHNTLWGMICPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSTEN 93
Score = 25.8 bits (55), Expect(2) = 1e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 114 WIGIHKDPEQLMNTLRKLR 132
[43][TOP]
>UniRef100_Q1L5B5 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum
RepID=Q1L5B5_RHOMC
Length = 1191
Score = 49.3 bits (116), Expect(2) = 2e-07
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + W N
Sbjct: 503 QLHNSQWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTEN 555
Score = 29.3 bits (64), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI RDP +L++ LR +R
Sbjct: 576 WVGIHRDPDMLVRTLRRLR 594
[44][TOP]
>UniRef100_Q42877 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Solanum
lycopersicum RepID=RPB2_SOLLC
Length = 1191
Score = 49.3 bits (116), Expect(2) = 2e-07
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + W N
Sbjct: 503 QLHNSQWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTEN 555
Score = 29.3 bits (64), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI RDP +L++ LR +R
Sbjct: 576 WVGIHRDPDMLVRTLRRLR 594
[45][TOP]
>UniRef100_Q1L5Z0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nicotiana sylvestris
RepID=Q1L5Z0_NICSY
Length = 1087
Score = 49.3 bits (116), Expect(2) = 2e-07
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + W N
Sbjct: 406 QLHNSQWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTEN 458
Score = 29.3 bits (64), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI RDP +L++ LR +R
Sbjct: 479 WVGIHRDPDMLVRTLRRLR 497
[46][TOP]
>UniRef100_A5H2B7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Degelia plumbea
RepID=A5H2B7_9LECA
Length = 718
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 118 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 152
Score = 30.4 bits (67), Expect(2) = 2e-07
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ N++++R + H +R R R IF
Sbjct: 190 VWVGVHRDPAHLVSNVQSLRRRHWISHEVS-LVRDIRDREFKIF 232
[47][TOP]
>UniRef100_B4UWR8 DNA-dependent RNA polymerase II second largest subunit (Fragment)
n=1 Tax=Tephromela atra RepID=B4UWR8_9LECA
Length = 362
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 102 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 136
Score = 30.4 bits (67), Expect(2) = 2e-07
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L++ ++ +R G + H +R R R IF
Sbjct: 174 VWVGVHRDPAHLVRTVQNLRRNGLISHEVS-LVRDIRDREFKIF 216
[48][TOP]
>UniRef100_B4UWR6 DNA-dependent RNA polymerase II second largest subunit (Fragment)
n=1 Tax=Tephromela atra RepID=B4UWR6_9LECA
Length = 362
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 102 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 136
Score = 30.4 bits (67), Expect(2) = 2e-07
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L++ ++ +R G + H +R R R IF
Sbjct: 174 VWVGVHRDPAHLVRTVQNLRRNGLISHEVS-LVRDIRDREFKIF 216
[49][TOP]
>UniRef100_A5PFY1 DNA-directed RNA polymerase II polypeptide 2 (Fragment) n=1
Tax=Lecania erysibe RepID=A5PFY1_9LECA
Length = 353
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 90 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 124
Score = 30.4 bits (67), Expect(2) = 2e-07
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQH 310
VW+G+ RDP L+ +++ +R G L H
Sbjct: 163 VWVGVHRDPKNLVNDVKKLRRGGMLSH 189
[50][TOP]
>UniRef100_B3F728 RNA polymerase 2 (Fragment) n=1 Tax=Eupenicillium idahoense
RepID=B3F728_9EURO
Length = 348
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 102 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 136
Score = 30.4 bits (67), Expect(2) = 2e-07
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ + A+R + H +R R R IF
Sbjct: 174 VWVGIHRDPSHLVNTMTALRRRNMISHEVS-LIRDIREREFKIF 216
[51][TOP]
>UniRef100_B3FDI9 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus parvulus
RepID=B3FDI9_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 30.4 bits (67), Expect(2) = 2e-07
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDPT L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPTHLVNTMLSLRRRNMISHEVS-LIRDIREREFKIF 206
[52][TOP]
>UniRef100_B3FDI1 RNA polymerase beta (Fragment) n=7 Tax=Aspergillus
RepID=B3FDI1_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 30.4 bits (67), Expect(2) = 2e-07
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDPT L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPTHLVNTMLSLRRRNMISHEVS-LIRDIREREFKIF 206
[53][TOP]
>UniRef100_B3FBZ7 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus caesiellus
RepID=B3FBZ7_9EURO
Length = 336
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 30.4 bits (67), Expect(2) = 2e-07
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ + A+R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMSALRRRNMISHEVS-LIRDIREREFKIF 206
[54][TOP]
>UniRef100_B3FBZ2 RNA polymerase beta (Fragment) n=2 Tax=Aspergillus
RepID=B3FBZ2_ASPRE
Length = 336
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 30.4 bits (67), Expect(2) = 2e-07
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ + A+R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMSALRRRNMISHEVS-LIRDIREREFKIF 206
[55][TOP]
>UniRef100_B3FBZ1 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus conicus
RepID=B3FBZ1_9EURO
Length = 336
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 30.4 bits (67), Expect(2) = 2e-07
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ + A+R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMSALRRRNMISHEVS-LIRDIREREFKIF 206
[56][TOP]
>UniRef100_B3FBZ0 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus sp. NRRL 145
RepID=B3FBZ0_9EURO
Length = 336
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 30.4 bits (67), Expect(2) = 2e-07
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ + A+R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMSALRRRNMISHEVS-LIRDIREREFKIF 206
[57][TOP]
>UniRef100_A7PJ31 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A7PJ31_VITVI
Length = 1220
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 505 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 557
Score = 28.5 bits (62), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 578 WVGIHRNPDLLVKTLRQLR 596
[58][TOP]
>UniRef100_A5C1N0 DNA-directed RNA polymerase n=2 Tax=Vitis RepID=A5C1N0_VITVI
Length = 1193
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 505 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 557
Score = 28.5 bits (62), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 578 WVGIHRNPDLLVKTLRQLR 596
[59][TOP]
>UniRef100_Q1L6E0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coriaria sarmentosa
RepID=Q1L6E0_9ROSI
Length = 952
Score = 49.3 bits (116), Expect(2) = 2e-07
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + W N
Sbjct: 399 QLHNSQWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAAYPILEFLEEWGTEN 451
Score = 28.9 bits (63), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 472 WVGIHREPDMLVKTLRRLR 490
[60][TOP]
>UniRef100_Q1L6E1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cissus tuberosa
RepID=Q1L6E1_9MAGN
Length = 951
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 399 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 451
Score = 28.5 bits (62), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 472 WVGIHRNPDLLVKTLRQLR 490
[61][TOP]
>UniRef100_Q1L6A5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetracentron sinense
RepID=Q1L6A5_9MAGN
Length = 951
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 399 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 451
Score = 28.5 bits (62), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 472 WVGIHRNPDLLVKTLRQLR 490
[62][TOP]
>UniRef100_Q1L5B2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Eschscholzia
californica RepID=Q1L5B2_ESCCA
Length = 951
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 399 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTEN 451
Score = 28.5 bits (62), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 472 WVGIHRNPELLVKTLRQLR 490
[63][TOP]
>UniRef100_Q6PA46 MGC68569 protein n=1 Tax=Xenopus laevis RepID=Q6PA46_XENLA
Length = 949
Score = 52.8 bits (125), Expect(2) = 2e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMICPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 2e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[64][TOP]
>UniRef100_Q1L5B1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Liriodendron
tulipifera RepID=Q1L5B1_LIRTU
Length = 942
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 391 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 443
Score = 28.5 bits (62), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 464 WVGIHRNPELLVKTLRQLR 482
[65][TOP]
>UniRef100_Q1L6E4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chimonanthus praecox
RepID=Q1L6E4_9MAGN
Length = 906
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 399 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTEN 451
Score = 28.5 bits (62), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 472 WVGIHRNPDLLVKTLRLLR 490
[66][TOP]
>UniRef100_A7XIE3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phymatotrichopsis
omnivora RepID=A7XIE3_9PEZI
Length = 884
Score = 44.3 bits (103), Expect(2) = 2e-07
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALM YITV
Sbjct: 303 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMSYITV 337
Score = 33.9 bits (76), Expect(2) = 2e-07
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L++ ++ +R TG + H +R R R IF
Sbjct: 375 VWVGIHRDPLQLVRTVQKLRRTGVISHEVS-VIRDIRDREFKIF 417
[67][TOP]
>UniRef100_Q1L6D2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Euptelea polyandra
RepID=Q1L6D2_9MAGN
Length = 874
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 399 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 451
Score = 28.5 bits (62), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 472 WVGIHRNPELLVKTLRQLR 490
[68][TOP]
>UniRef100_Q1L6C4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hibbertia scandens
RepID=Q1L6C4_9MAGN
Length = 873
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 399 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 451
Score = 28.5 bits (62), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 472 WVGIHRNPDLLVKTLRQLR 490
[69][TOP]
>UniRef100_Q1L5Z6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Berberidopsis
beckleri RepID=Q1L5Z6_9MAGN
Length = 873
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 399 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 451
Score = 28.5 bits (62), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 472 WVGIHRNPDLLVKTLRQLR 490
[70][TOP]
>UniRef100_Q1L6D6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Dillenia
suffruticosa RepID=Q1L6D6_9MAGN
Length = 868
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 394 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 446
Score = 28.5 bits (62), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 467 WVGIHRNPDLLVKTLRQLR 485
[71][TOP]
>UniRef100_Q1L6B7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nelumbo nucifera
RepID=Q1L6B7_NELNU
Length = 865
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 391 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 443
Score = 28.5 bits (62), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 464 WVGIHRNPELLVKTLRQLR 482
[72][TOP]
>UniRef100_Q5US97 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acarospora
canadensis RepID=Q5US97_9LECA
Length = 713
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 114 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 148
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ + A+R + H +R R R IF
Sbjct: 186 VWVGVHRDPAHLVSTVLALRRANAISHEVS-LVRDIRDREFKIF 228
[73][TOP]
>UniRef100_Q0PPY6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mycoblastus
sanguinarius RepID=Q0PPY6_9LECA
Length = 709
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 109 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 143
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L++ ++ +R G + H +R R R IF
Sbjct: 181 VWVGVHRDPAHLVRTVQNLRRKGLISHEVS-LVRDIRDREFKIF 223
[74][TOP]
>UniRef100_Q1L6D4 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Embothrium coccineum RepID=Q1L6D4_EMBCO
Length = 706
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 399 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 451
Score = 28.5 bits (62), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 472 WVGIHRNPELLVKTLRQLR 490
[75][TOP]
>UniRef100_Q5US92 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acarospora
macrospora subsp. macrospora RepID=Q5US92_9LECA
Length = 706
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 109 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 143
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ + A+R + H +R R R IF
Sbjct: 181 VWVGVHRDPAHLVSTVLALRRANAISHEVS-LVRDIRDREFKIF 223
[76][TOP]
>UniRef100_B4UWV2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pycnothelia
papillaria RepID=B4UWV2_9LECA
Length = 693
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 102 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 136
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ ++ +R G + H +R R R IF
Sbjct: 174 VWVGVHRDPAHLVSTVQNLRRKGMISHEVS-LIRDIRDREFKIF 216
[77][TOP]
>UniRef100_Q5V8M5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cladonia caroliniana
RepID=Q5V8M5_9LECA
Length = 642
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 107 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 141
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ ++ +R G + H +R R R IF
Sbjct: 179 VWVGVHRDPAHLVSTVQNLRRKGMISHEVS-LIRDIRDREFKIF 221
[78][TOP]
>UniRef100_Q6Q256 DNA-directed RNA polymerase (Fragment) n=1 Tax=Camellia japonica
RepID=Q6Q256_9ERIC
Length = 591
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 7 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTEN 59
Score = 28.5 bits (62), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 80 WVGIHRNPELLVKTLRQLR 98
[79][TOP]
>UniRef100_Q6Q267 DNA-directed RNA polymerase (Fragment) n=1 Tax=Eschscholzia
californica RepID=Q6Q267_ESCCA
Length = 559
Score = 49.7 bits (117), Expect(2) = 2e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 7 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAAHPILEFLEEWSTEN 59
Score = 28.5 bits (62), Expect(2) = 2e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 80 WVGIHRNPELLVKTLRQLR 98
[80][TOP]
>UniRef100_A5H2I0 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Cetradonia sp. AFTOL 1657 RepID=A5H2I0_9LECA
Length = 391
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 111 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 145
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ ++ +R G + H +R R R IF
Sbjct: 183 VWVGVHRDPAHLVSTVQNLRRKGMISHEVS-LIRDIRDREFKIF 225
[81][TOP]
>UniRef100_B9U328 RNA polymerase beta (Fragment) n=1 Tax=Eupenicillium tropicum
RepID=B9U328_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMQSLRRRNMISHEVS-LIRDIREREFKIF 206
[82][TOP]
>UniRef100_B9U327 RNA polymerase beta (Fragment) n=2 Tax=Penicillium
RepID=B9U327_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMQSLRRRNMISHEVS-LIRDIREREFKIF 206
[83][TOP]
>UniRef100_B9U326 RNA polymerase beta (Fragment) n=1 Tax=Penicillium paxilli
RepID=B9U326_PENPX
Length = 338
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMQSLRRRNMISHEVS-LIRDIREREFKIF 206
[84][TOP]
>UniRef100_A9XES8 RNA polymerase beta (Fragment) n=2 Tax=Penicillium
RepID=A9XES8_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMQSLRRRNMISHEVS-LIRDIREREFKIF 206
[85][TOP]
>UniRef100_B3FBY9 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus vitricola
RepID=B3FBY9_9EURO
Length = 336
Score = 48.1 bits (113), Expect(2) = 2e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 30.0 bits (66), Expect(2) = 2e-07
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + A+R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSALRRRNMISHEVS-LIRDIREREFKIF 206
[86][TOP]
>UniRef100_Q0N3T7 RNA polymerase subunit II (Fragment) n=1 Tax=Cladonia subtenuis
RepID=Q0N3T7_9LECA
Length = 254
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 88 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 122
Score = 30.0 bits (66), Expect(2) = 3e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ ++ +R G + H +R R R IF
Sbjct: 160 VWVGVHRDPAHLVSTVQNLRRKGMISHEVS-LIRDIRDREFKIF 202
[87][TOP]
>UniRef100_Q0N3T4 RNA polymerase subunit II (Fragment) n=1 Tax=Cladonia subtenuis
RepID=Q0N3T4_9LECA
Length = 254
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 88 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 122
Score = 30.0 bits (66), Expect(2) = 3e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ ++ +R G + H +R R R IF
Sbjct: 160 VWVGVHRDPAHLVSTVQNLRRKGMISHEVS-LIRDIRDREFKIF 202
[88][TOP]
>UniRef100_Q0N3T0 RNA polymerase subunit II (Fragment) n=1 Tax=Cladonia subtenuis
RepID=Q0N3T0_9LECA
Length = 254
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 88 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 122
Score = 30.0 bits (66), Expect(2) = 3e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ ++ +R G + H +R R R IF
Sbjct: 160 VWVGVHRDPAHLVSTVQNLRRKGMISHEVS-LIRDIRDREFKIF 202
[89][TOP]
>UniRef100_Q4T1Y4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon
nigroviridis RepID=Q4T1Y4_TETNG
Length = 1217
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 473 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 525
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 546 WVGIHKDPEQLMNTLRKLR 564
[90][TOP]
>UniRef100_A9SJE5 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9SJE5_PHYPA
Length = 1185
Score = 50.1 bits (118), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 497 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMAYITVGSAANPILEFLEEWSTEN 549
Score = 27.7 bits (60), Expect(2) = 3e-07
Identities = 9/20 (45%), Positives = 16/20 (80%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMR 289
+W+GI R+P +L++ LR +R
Sbjct: 569 LWVGIHRNPELLVRTLRQLR 588
[91][TOP]
>UniRef100_UPI00005A2A55 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
9 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A55
Length = 1182
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 496 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 548
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 569 WVGIHKDPEQLMNTLRKLR 587
[92][TOP]
>UniRef100_UPI00005A2A59 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
13 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A59
Length = 1180
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[93][TOP]
>UniRef100_UPI00005A2A57 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
11 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A57
Length = 1180
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[94][TOP]
>UniRef100_UPI00005A2A5B PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
15 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5B
Length = 1179
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[95][TOP]
>UniRef100_UPI0000F3357E UPI0000F3357E related cluster n=1 Tax=Bos taurus
RepID=UPI0000F3357E
Length = 1177
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 501 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 553
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 574 WVGIHKDPEQLMNTLRKLR 592
[96][TOP]
>UniRef100_UPI0000EB23D9 DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA
polymerase II subunit B2) (DNA-directed RNA polymerase
II subunit B) (RNA polymerase II subunit 2)
(DNA-directed RNA polymerase II 140 kDa polypeptide).
n=1 Tax=Canis lupus familiaris RepID=UPI0000EB23D9
Length = 1176
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[97][TOP]
>UniRef100_UPI0000ECC4A8 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
Tax=Gallus gallus RepID=UPI0000ECC4A8
Length = 1176
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 502 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 554
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 575 WVGIHKDPEQLMNTLRKLR 593
[98][TOP]
>UniRef100_UPI00005A2A5A PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
14 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5A
Length = 1175
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[99][TOP]
>UniRef100_UPI0001B09250 DNA directed RNA polymerase II polypeptide B n=1 Tax=Danio rerio
RepID=UPI0001B09250
Length = 1174
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[100][TOP]
>UniRef100_UPI000194C2A3 PREDICTED: polymerase (RNA) II (DNA directed) polypeptide B, 140kDa
n=1 Tax=Taeniopygia guttata RepID=UPI000194C2A3
Length = 1174
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[101][TOP]
>UniRef100_UPI0001795E58 PREDICTED: similar to DNA-directed RNA polymerase II subunit RPB2
(RNA polymerase II subunit B2) (DNA-directed RNA
polymerase II subunit B) (RNA polymerase II subunit 2)
(DNA-directed RNA polymerase II 140 kDa polypeptide) n=1
Tax=Equus caballus RepID=UPI0001795E58
Length = 1174
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[102][TOP]
>UniRef100_UPI0000F2D75F PREDICTED: similar to RNA polymerase II 140 kDa subunit n=1
Tax=Monodelphis domestica RepID=UPI0000F2D75F
Length = 1174
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[103][TOP]
>UniRef100_P30876 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=Catarrhini
RepID=RPB2_HUMAN
Length = 1174
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[104][TOP]
>UniRef100_UPI00005A2A58 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
12 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A58
Length = 1174
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 501 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 553
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 574 WVGIHKDPEQLMNTLRKLR 592
[105][TOP]
>UniRef100_UPI00003AD7E4 polymerase (RNA) II (DNA directed) polypeptide B, 140kDa n=1
Tax=Gallus gallus RepID=UPI00003AD7E4
Length = 1174
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[106][TOP]
>UniRef100_Q5ZMN9 DNA-directed RNA polymerase n=1 Tax=Gallus gallus
RepID=Q5ZMN9_CHICK
Length = 1174
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[107][TOP]
>UniRef100_C0HA74 DNA-directed RNA polymerase n=1 Tax=Salmo salar RepID=C0HA74_SALSA
Length = 1174
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[108][TOP]
>UniRef100_A5PJW8 DNA-directed RNA polymerase n=1 Tax=Bos taurus RepID=A5PJW8_BOVIN
Length = 1174
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[109][TOP]
>UniRef100_Q8CFI7 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Mus musculus
RepID=RPB2_MOUSE
Length = 1174
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[110][TOP]
>UniRef100_UPI00005A2A5C PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
16 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5C
Length = 1173
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[111][TOP]
>UniRef100_UPI00005A2A54 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
8 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A54
Length = 1173
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[112][TOP]
>UniRef100_A8MW88 DNA-directed RNA polymerase (Fragment) n=1 Tax=Homo sapiens
RepID=A8MW88_HUMAN
Length = 1173
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 499 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 551
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 572 WVGIHKDPEQLMNTLRKLR 590
[113][TOP]
>UniRef100_B4DHJ3 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DHJ3_HUMAN
Length = 1167
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 493 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 545
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 566 WVGIHKDPEQLMNTLRKLR 584
[114][TOP]
>UniRef100_UPI00005A2A56 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
10 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A56
Length = 1166
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 495 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 547
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 568 WVGIHKDPEQLMNTLRKLR 586
[115][TOP]
>UniRef100_UPI00005A2A52 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
6 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A52
Length = 1162
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[116][TOP]
>UniRef100_UPI00017B4CC9 UPI00017B4CC9 related cluster n=1 Tax=Tetraodon nigroviridis
RepID=UPI00017B4CC9
Length = 1147
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 473 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 525
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 546 WVGIHKDPEQLMNTLRKLR 564
[117][TOP]
>UniRef100_UPI00005A2A53 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
7 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A53
Length = 1113
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 442 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 494
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 515 WVGIHKDPEQLMNTLRKLR 533
[118][TOP]
>UniRef100_UPI0000E20419 PREDICTED: DNA directed RNA polymerase II polypeptide B isoform 1
n=1 Tax=Pan troglodytes RepID=UPI0000E20419
Length = 1099
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 425 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 477
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 498 WVGIHKDPEQLMNTLRKLR 516
[119][TOP]
>UniRef100_UPI00005A2A5D PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
17 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A5D
Length = 1099
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 425 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 477
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 498 WVGIHKDPEQLMNTLRKLR 516
[120][TOP]
>UniRef100_B4DH29 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DH29_HUMAN
Length = 1099
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 425 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 477
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 498 WVGIHKDPEQLMNTLRKLR 516
[121][TOP]
>UniRef100_B4DR40 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B4DR40_HUMAN
Length = 1083
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 409 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 461
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 482 WVGIHKDPEQLMNTLRKLR 500
[122][TOP]
>UniRef100_UPI00016DFC9D UPI00016DFC9D related cluster n=1 Tax=Takifugu rubripes
RepID=UPI00016DFC9D
Length = 1045
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 309 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 361
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 382 WVGIHKDPEQLMNTLRKLR 400
[123][TOP]
>UniRef100_UPI000155BCC7 PREDICTED: similar to RNA polymerase II 140 kDa subunit, partial
n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155BCC7
Length = 951
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[124][TOP]
>UniRef100_UPI00005A2A51 PREDICTED: similar to DNA-directed RNA polymerase II 140 kDa
polypeptide (RNA polymerase II subunit 2) (RPB2) isoform
5 n=1 Tax=Canis lupus familiaris RepID=UPI00005A2A51
Length = 932
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[125][TOP]
>UniRef100_UPI00006A01AA DNA-directed RNA polymerase II subunit RPB2 (EC 2.7.7.6) (RNA
polymerase II subunit B2) (DNA-directed RNA polymerase
II subunit B) (RNA polymerase II subunit 2)
(DNA-directed RNA polymerase II 140 kDa polypeptide).
n=1 Tax=Xenopus (Silurana) tropicalis
RepID=UPI00006A01AA
Length = 927
Score = 52.4 bits (124), Expect(2) = 3e-07
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCA--LPLCRWWRTWSEFN 156
QLHN+LWG+ CPA + +GH V LVKN+ALM YI+V + P+ + WS N
Sbjct: 500 QLHNTLWGMVCPA-ETPEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMEN 552
Score = 25.4 bits (54), Expect(2) = 3e-07
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI +DP L+ LR +R
Sbjct: 573 WVGIHKDPEQLMNTLRKLR 591
[126][TOP]
>UniRef100_Q5US43 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sporastatia
polyspora RepID=Q5US43_9LECA
Length = 713
Score = 47.8 bits (112), Expect(2) = 3e-07
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCY+TV
Sbjct: 112 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYVTV 146
Score = 30.0 bits (66), Expect(2) = 3e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ ++A+R + H +R R R IF
Sbjct: 184 VWVGVHRDPAHLVSTVQALRRKNVISHEVS-LIRDIRDREFKIF 226
[127][TOP]
>UniRef100_Q5US42 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sporastatia
testudinea RepID=Q5US42_9LECA
Length = 700
Score = 47.8 bits (112), Expect(2) = 3e-07
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCY+TV
Sbjct: 99 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYVTV 133
Score = 30.0 bits (66), Expect(2) = 3e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ ++A+R + H +R R R IF
Sbjct: 171 VWVGVHRDPAHLVSTVQALRRKNVISHEVS-LIRDIRDREFKIF 213
[128][TOP]
>UniRef100_B3FH76 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus arenarius
RepID=B3FH76_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.6 bits (65), Expect(2) = 3e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMQSLRRRNMISHEVS-LIRDIREREFKIF 206
[129][TOP]
>UniRef100_B3FD55 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus heteromorphus
RepID=B3FD55_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.6 bits (65), Expect(2) = 3e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMQSLRRRNMISHEVS-LIRDIREREFKIF 206
[130][TOP]
>UniRef100_B1NN39 RNA polymerase beta (Fragment) n=1 Tax=Penicilliopsis
clavariiformis RepID=B1NN39_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.6 bits (65), Expect(2) = 3e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVSTMQSLRRRNMISHEVS-LIRDIRDREFKIF 206
[131][TOP]
>UniRef100_B1NN38 RNA polymerase beta (Fragment) n=1 Tax=Warcupiella spinulosa
RepID=B1NN38_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.6 bits (65), Expect(2) = 3e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMQSLRRRNMISHEVS-LIRDIREREFKIF 206
[132][TOP]
>UniRef100_B1NN37 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus zonatus
RepID=B1NN37_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.6 bits (65), Expect(2) = 3e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMQSLRRRNMISHEVS-LIRDIREREFKIF 206
[133][TOP]
>UniRef100_B1NN08 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus candidus
RepID=B1NN08_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.6 bits (65), Expect(2) = 3e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVSTMQSLRRRNMISHEVS-LIRDIREREFKIF 206
[134][TOP]
>UniRef100_B1NMZ1 RNA polymerase beta (Fragment) n=2 Tax=Aspergillus
RepID=B1NMZ1_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.6 bits (65), Expect(2) = 3e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMQSLRRRNMISHEVS-LIRDIREREFKIF 206
[135][TOP]
>UniRef100_B3FH57 RNA polymerase beta (Fragment) n=1 Tax=Talaromyces emersonii
RepID=B3FH57_TALEM
Length = 337
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.6 bits (65), Expect(2) = 3e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDPT L+ + ++R + H +R R R IF
Sbjct: 164 VWVGVHRDPTHLVNTILSLRRRNMISHEVS-LVRDIRDREFKIF 206
[136][TOP]
>UniRef100_B3FCC6 RNA polymerase beta (Fragment) n=1 Tax=Emericella astellata
RepID=B3FCC6_9EURO
Length = 337
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.6 bits (65), Expect(2) = 3e-07
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L++ ++++R + H +R R R IF
Sbjct: 164 VWVGVHRDPAHLVETMQSLRRRNMISHEVS-LIRDIRDREFKIF 206
[137][TOP]
>UniRef100_B3FCB5 RNA polymerase beta (Fragment) n=1 Tax=Emericella sp. NRRL 212
RepID=B3FCB5_9EURO
Length = 337
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.6 bits (65), Expect(2) = 3e-07
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L++ ++++R + H +R R R IF
Sbjct: 164 VWVGVHRDPAHLVETMQSLRRRNMISHEVS-LIRDIRDREFKIF 206
[138][TOP]
>UniRef100_B3FCB1 RNA polymerase beta (Fragment) n=1 Tax=Emericella variecolor
RepID=B3FCB1_9EURO
Length = 337
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.6 bits (65), Expect(2) = 3e-07
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L++ ++++R + H +R R R IF
Sbjct: 164 VWVGVHRDPAHLVETMQSLRRRNMISHEVS-LIRDIRDREFKIF 206
[139][TOP]
>UniRef100_B3FCA8 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus caespitosus
RepID=B3FCA8_9EURO
Length = 337
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.6 bits (65), Expect(2) = 3e-07
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L++ ++++R + H +R R R IF
Sbjct: 164 VWVGVHRDPAHLVETMQSLRRRNMISHEVS-LIRDIRDREFKIF 206
[140][TOP]
>UniRef100_B3FCA6 RNA polymerase beta (Fragment) n=1 Tax=Emericella variecolor
RepID=B3FCA6_9EURO
Length = 337
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.6 bits (65), Expect(2) = 3e-07
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L++ ++++R + H +R R R IF
Sbjct: 164 VWVGVHRDPAHLVETMQSLRRRNMISHEVS-LIRDIRDREFKIF 206
[141][TOP]
>UniRef100_B3FBZ8 RNA polymerase beta (Fragment) n=1 Tax=Eurotium halophilicum
RepID=B3FBZ8_9EURO
Length = 336
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.6 bits (65), Expect(2) = 3e-07
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + A+R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMLALRRRNMISHEVS-LIRDIREREFKIF 206
[142][TOP]
>UniRef100_B3FBY8 RNA polymerase beta (Fragment) n=1 Tax=Eurotium leucocarpum
RepID=B3FBY8_9EURO
Length = 336
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.6 bits (65), Expect(2) = 3e-07
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + A+R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMLALRRRNMISHEVS-LIRDIREREFKIF 206
[143][TOP]
>UniRef100_Q0N3T5 RNA polymerase subunit II (Fragment) n=1 Tax=Cladonia subtenuis
RepID=Q0N3T5_9LECA
Length = 254
Score = 48.1 bits (113), Expect(2) = 3e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 88 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 122
Score = 29.6 bits (65), Expect(2) = 3e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ ++ +R G + H +R R R IF
Sbjct: 160 VWVGVHRDPAHLVSTVQNLRRKGMISHEVS-LVRDIRDREFKIF 202
[144][TOP]
>UniRef100_C5FJF0 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
RepID=C5FJF0_NANOT
Length = 1258
Score = 44.7 bits (104), Expect(3) = 4e-07
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMC ITV
Sbjct: 535 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCCITV 569
Score = 27.3 bits (59), Expect(3) = 4e-07
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQH 310
VW+G+ RDP L+ ++++R + H
Sbjct: 607 VWVGVHRDPAHLVGTVQSLRRRNMISH 633
Score = 24.6 bits (52), Expect(3) = 4e-07
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 105 SVCTPSLPVVAHLE*VQHVSALDECDALPTSPASTKVFIN 224
+V TPS P++ + +++ L+E + SP STKVF+N
Sbjct: 568 TVGTPSEPIIDFMI-QRNMEVLEEFEP-QVSPNSTKVFVN 605
[145][TOP]
>UniRef100_Q8J1L6 DNA-dependent RNA polymerase II RPB140 (Fragment) n=2
Tax=Arthrodermataceae RepID=Q8J1L6_TRISH
Length = 394
Score = 44.7 bits (104), Expect(3) = 4e-07
Identities = 21/36 (58%), Positives = 26/36 (72%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMC ITV
Sbjct: 118 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCCITV 152
Score = 27.3 bits (59), Expect(3) = 4e-07
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQH 310
VW+G+ RDP L+ ++++R + H
Sbjct: 190 VWVGVHRDPAHLVGTVQSLRRRNMISH 216
Score = 24.6 bits (52), Expect(3) = 4e-07
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 105 SVCTPSLPVVAHLE*VQHVSALDECDALPTSPASTKVFIN 224
+V TPS P++ + +++ L+E + SP STKVF+N
Sbjct: 151 TVGTPSEPIIDFMI-QRNMEVLEEFEP-QVSPNSTKVFVN 188
[146][TOP]
>UniRef100_B8NK59 DNA-directed RNA polymerase n=2 Tax=Aspergillus RepID=B8NK59_ASPFN
Length = 1254
Score = 47.8 bits (112), Expect(2) = 4e-07
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCY+TV
Sbjct: 532 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYVTV 566
Score = 29.6 bits (65), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ ++++R + H +R R R IF
Sbjct: 604 VWVGIHRDPAHLVNTMQSLRRRNMISHEVS-LIRDIREREFKIF 646
[147][TOP]
>UniRef100_Q9UV94 DNA-directed RNA polymerase (Fragment) n=1 Tax=Byssochlamys nivea
RepID=Q9UV94_9EURO
Length = 905
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 311 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 345
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ ++++R + H +R R R IF
Sbjct: 383 VWVGIHRDPSHLVSTVQSLRRRNMISHEVS-LVRDIRDREFKIF 425
[148][TOP]
>UniRef100_Q5US76 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glypholecia scabra
RepID=Q5US76_9LECA
Length = 722
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 112 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 146
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ + A+R + H +R R R IF
Sbjct: 184 VWVGVHRDPAHLVSTVIALRRLNAISHEVS-LVRDIRDREFKIF 226
[149][TOP]
>UniRef100_Q5US93 DNA-directed RNA polymerase (Fragment) n=1 Tax=Acarospora laqueata
RepID=Q5US93_9LECA
Length = 711
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 115 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 149
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ + A+R + H +R R R IF
Sbjct: 187 VWVGVHRDPAHLVSTVLALRRQDAISHEVS-LVRDIRDREFKIF 229
[150][TOP]
>UniRef100_Q0PPY4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monascus purpureus
RepID=Q0PPY4_MONAN
Length = 700
Score = 46.6 bits (109), Expect(2) = 4e-07
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYI+V
Sbjct: 108 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYISV 142
Score = 30.8 bits (68), Expect(2) = 4e-07
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R G + H +R R R IF
Sbjct: 180 VWVGIHRDPAHLVNTMLSLRRRGMISHEVS-LIRDIREREFKIF 222
[151][TOP]
>UniRef100_Q5US37 DNA-directed RNA polymerase (Fragment) n=1 Tax=Hamigera avellanea
RepID=Q5US37_9EURO
Length = 693
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 112 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 146
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 184 VWVGIHRDPAHLVNTMNSLRRRNMISHEVS-LIRDIRDREFKIF 226
[152][TOP]
>UniRef100_A5H2I6 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Menegazzia terebrata RepID=A5H2I6_9LECA
Length = 387
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 111 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 145
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQH 310
VW+G+ RDP L+ ++++R G + H
Sbjct: 183 VWVGVHRDPAHLVGTVQSLRRRGLISH 209
[153][TOP]
>UniRef100_B4UWQ9 DNA-dependent RNA polymerase II second largest subunit (Fragment)
n=1 Tax=Protoblastenia calva RepID=B4UWQ9_9LECA
Length = 365
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 106 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 140
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ ++ +R G + H +R R R IF
Sbjct: 178 VWVGVHRDPAHLVNTVQNLRRRGLISHEVS-LVRDIRDREFKIF 220
[154][TOP]
>UniRef100_B4UWR2 DNA-dependent RNA polymerase II second largest subunit (Fragment)
n=1 Tax=Psora rubiformis RepID=B4UWR2_9LECA
Length = 352
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 98 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 132
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ ++ +R G + H +R R R IF
Sbjct: 170 VWVGVHRDPAHLVNTVQNLRRRGLISHEVS-LVRDIRDREFKIF 212
[155][TOP]
>UniRef100_B4UWR1 DNA-dependent RNA polymerase II second largest subunit (Fragment)
n=1 Tax=Psora decipiens RepID=B4UWR1_9LECA
Length = 342
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 82 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 116
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ ++ +R G + H +R R R IF
Sbjct: 154 VWVGVHRDPAHLVNTVQNLRRRGLISHEVS-LVRDIRDREFKIF 196
[156][TOP]
>UniRef100_B9U331 RNA polymerase beta (Fragment) n=2 Tax=Penicillium
RepID=B9U331_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMTSLRRRNMISHEVS-LIRDIREREFKIF 206
[157][TOP]
>UniRef100_B9U329 RNA polymerase beta (Fragment) n=2 Tax=Penicillium
RepID=B9U329_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[158][TOP]
>UniRef100_B3FH58 RNA polymerase beta (Fragment) n=1 Tax=Byssochlamys nivea
RepID=B3FH58_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVSTVQSLRRRNMISHEVS-LVRDIRDREFKIF 206
[159][TOP]
>UniRef100_B3FDM6 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus
ochraceopetaliformis RepID=B3FDM6_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L++ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVQTMQSLRHKNLISHEVS-LIRDIREREFKIF 206
[160][TOP]
>UniRef100_B3FDM3 RNA polymerase beta (Fragment) n=3 Tax=Aspergillus
RepID=B3FDM3_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L++ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVQTMQSLRHKNLISHEVS-LIRDIREREFKIF 206
[161][TOP]
>UniRef100_B3F7V9 RNA polymerase 2 (Fragment) n=1 Tax=Penicillium dierckxii
RepID=B3F7V9_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[162][TOP]
>UniRef100_B3FH50 RNA polymerase beta (Fragment) n=1 Tax=Hamigera avellanea
RepID=B3FH50_9EURO
Length = 337
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMNSLRRRNMISHEVS-LIRDIRDREFKIF 206
[163][TOP]
>UniRef100_A9XEZ7 RNA polymerase beta (Fragment) n=1 Tax=Penicillium glabrum
RepID=A9XEZ7_PENGL
Length = 337
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMASLRRRNMISHEVS-LIRDIREREFKIF 206
[164][TOP]
>UniRef100_A9XEZ6 RNA polymerase beta (Fragment) n=1 Tax=Penicillium sp. NRRL 35682
RepID=A9XEZ6_9EURO
Length = 337
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMASLRRRNMISHEVS-LIRDIREREFKIF 206
[165][TOP]
>UniRef100_B3FE07 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus nomius
RepID=B3FE07_ASPNO
Length = 337
Score = 47.8 bits (112), Expect(2) = 4e-07
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCY+TV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYVTV 126
Score = 29.6 bits (65), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMQSLRRRNMISHEVS-LIRDIREREFKIF 206
[166][TOP]
>UniRef100_B3FE02 RNA polymerase beta (Fragment) n=6 Tax=Aspergillus
RepID=B3FE02_ASPPA
Length = 337
Score = 47.8 bits (112), Expect(2) = 4e-07
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCY+TV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYVTV 126
Score = 29.6 bits (65), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMQSLRRRNMISHEVS-LIRDIREREFKIF 206
[167][TOP]
>UniRef100_B3FDZ2 RNA polymerase beta (Fragment) n=2 Tax=Aspergillus
RepID=B3FDZ2_ASPOR
Length = 337
Score = 47.8 bits (112), Expect(2) = 4e-07
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCY+TV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYVTV 126
Score = 29.6 bits (65), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMQSLRRRNMISHEVS-LIRDIREREFKIF 206
[168][TOP]
>UniRef100_B3FDZ1 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus caelatus
RepID=B3FDZ1_9EURO
Length = 337
Score = 47.8 bits (112), Expect(2) = 4e-07
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCY+TV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYVTV 126
Score = 29.6 bits (65), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMQSLRRRNMISHEVS-LIRDIREREFKIF 206
[169][TOP]
>UniRef100_B3FDZ0 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus caelatus
RepID=B3FDZ0_9EURO
Length = 337
Score = 47.8 bits (112), Expect(2) = 4e-07
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCY+TV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYVTV 126
Score = 29.6 bits (65), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ ++++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMQSLRRRNMISHEVS-LIRDIREREFKIF 206
[170][TOP]
>UniRef100_B3FCF7 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus multicolor
RepID=B3FCF7_9EURO
Length = 336
Score = 48.1 bits (113), Expect(2) = 4e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 29.3 bits (64), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI R P+ L++ ++A+R + H +R R R IF
Sbjct: 164 VWVGIHRQPSHLVETMQALRRRNMISHEVS-LIRDIREREFKIF 206
[171][TOP]
>UniRef100_B1NN76 RNA polymerase beta (Fragment) n=1 Tax=Monascus purpureus
RepID=B1NN76_MONAN
Length = 336
Score = 46.6 bits (109), Expect(2) = 4e-07
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYI+V
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYISV 126
Score = 30.8 bits (68), Expect(2) = 4e-07
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R G + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMLSLRRRGMISHEVS-LIRDIREREFKIF 206
[172][TOP]
>UniRef100_C0LJZ9 RNA polymerase II subunit (Fragment) n=1 Tax=dark septate endophyte
sp. MSP 6 RepID=C0LJZ9_9HELO
Length = 300
Score = 47.8 bits (112), Expect(2) = 4e-07
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCY+TV
Sbjct: 32 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYVTV 66
Score = 29.6 bits (65), Expect(2) = 4e-07
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP+ L+K ++ +R + + H +R R R IF
Sbjct: 104 VWVGVHRDPSHLVKTVQHLRRSHLISHEVS-LIRDIRDREFKIF 146
[173][TOP]
>UniRef100_C5JQR0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis
SLH14081 RepID=C5JQR0_AJEDS
Length = 1258
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 535 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 569
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP+ L+ ++++R + H +R R R IF
Sbjct: 607 VWVGVHRDPSHLVNTVQSLRRRNMISHEVS-LVRDIRDREFKIF 649
[174][TOP]
>UniRef100_C5GBN2 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3
RepID=C5GBN2_AJEDR
Length = 1258
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 535 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 569
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP+ L+ ++++R + H +R R R IF
Sbjct: 607 VWVGVHRDPSHLVNTVQSLRRRNMISHEVS-LVRDIRDREFKIF 649
[175][TOP]
>UniRef100_C1H7W3 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
Pb01 RepID=C1H7W3_PARBA
Length = 1258
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 535 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 569
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP+ L+ ++++R + H +R R R IF
Sbjct: 607 VWVGVHRDPSHLVSTVQSLRRRNMISHEVS-LVRDIRDREFKIF 649
[176][TOP]
>UniRef100_C0S0L5 DNA-directed RNA polymerase n=2 Tax=Paracoccidioides brasiliensis
RepID=C0S0L5_PARBP
Length = 1258
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 535 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 569
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP+ L+ ++++R + H +R R R IF
Sbjct: 607 VWVGVHRDPSHLVSTVQSLRRRNMISHEVS-LVRDIRDREFKIF 649
[177][TOP]
>UniRef100_Q0CWW4 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
RepID=Q0CWW4_ASPTN
Length = 1256
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 533 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 567
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 605 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 647
[178][TOP]
>UniRef100_C8VK81 DNA-directed RNA polymerase (EC 2.7.7.6)
[Source:UniProtKB/TrEMBL;Acc:Q9UV95] n=2 Tax=Emericella
nidulans RepID=C8VK81_EMENI
Length = 1252
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 531 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 565
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ R P+ L++ ++A+R + H +R R R IF
Sbjct: 603 VWVGVHRQPSHLVETMQALRRRNMISHEVS-LIRDIREREFKIF 645
[179][TOP]
>UniRef100_Q1L5B4 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum
RepID=Q1L5B4_RHOMC
Length = 1207
Score = 49.7 bits (117), Expect(2) = 5e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 521 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 573
Score = 27.3 bits (59), Expect(2) = 5e-07
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L++ LR +R
Sbjct: 594 WVGIHRNPELLVRTLRQLR 612
[180][TOP]
>UniRef100_Q1L5Z1 DNA-directed RNA polymerase n=1 Tax=Solanum lycopersicum
RepID=Q1L5Z1_SOLLC
Length = 1205
Score = 49.7 bits (117), Expect(2) = 5e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 522 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 574
Score = 27.3 bits (59), Expect(2) = 5e-07
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L++ LR +R
Sbjct: 595 WVGIHRNPDLLVRTLRQLR 613
[181][TOP]
>UniRef100_Q1L5Z4 DNA-directed RNA polymerase n=1 Tax=Nicotiana sylvestris
RepID=Q1L5Z4_NICSY
Length = 1203
Score = 49.7 bits (117), Expect(2) = 5e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 517 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 569
Score = 27.3 bits (59), Expect(2) = 5e-07
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L++ LR +R
Sbjct: 590 WVGIHRNPDLLVRTLRQLR 608
[182][TOP]
>UniRef100_Q1L5Z2 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida
RepID=Q1L5Z2_PETHY
Length = 1203
Score = 49.7 bits (117), Expect(2) = 5e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 517 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 569
Score = 27.3 bits (59), Expect(2) = 5e-07
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L++ LR +R
Sbjct: 590 WVGIHRNPDLLVRTLRQLR 608
[183][TOP]
>UniRef100_Q5ARG0 DNA-directed RNA polymerase n=1 Tax=Emericella nidulans
RepID=Q5ARG0_EMENI
Length = 1028
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 307 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 341
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ R P+ L++ ++A+R + H +R R R IF
Sbjct: 379 VWVGVHRQPSHLVETMQALRRRNMISHEVS-LIRDIREREFKIF 421
[184][TOP]
>UniRef100_Q5V8M3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ostropa barbara
RepID=Q5V8M3_9LECA
Length = 719
Score = 47.8 bits (112), Expect(2) = 5e-07
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCY+TV
Sbjct: 118 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYVTV 152
Score = 29.3 bits (64), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+K ++ +R + + H +R R R IF
Sbjct: 190 VWVGVHRDPAHLVKTVQHLRRSHLISHEVS-LIRDIRDREFKIF 232
[185][TOP]
>UniRef100_A5H2A8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Parmotrema
reticulatum RepID=A5H2A8_9LECA
Length = 718
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 118 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 152
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQH 310
VW+G+ RDP L+ ++ +R G + H
Sbjct: 190 VWVGVHRDPAHLVGTVQTLRRRGLISH 216
[186][TOP]
>UniRef100_Q5US49 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhytisma acerinum
RepID=Q5US49_9PEZI
Length = 708
Score = 47.8 bits (112), Expect(2) = 5e-07
Identities = 21/36 (58%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCY+TV
Sbjct: 111 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYVTV 145
Score = 29.3 bits (64), Expect(2) = 5e-07
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHH---LRCARSRSLCIF 361
VW+G+ RDP L+K ++ +R QH H +R R R IF
Sbjct: 183 VWVGVHRDPAHLVKTVQDLR----RQHMISHEVSLIRDIRDREFKIF 225
[187][TOP]
>UniRef100_Q0MT73 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Wallemia muriae RepID=Q0MT73_WALMU
Length = 365
Score = 39.3 bits (90), Expect(2) = 5e-07
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQH 310
VW+G+ RDPT L+K LR +R G +QH
Sbjct: 182 VWIGVHRDPTNLVKTLRKLRREGDIQH 208
Score = 37.7 bits (86), Expect(2) = 5e-07
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTW-----SEFN 156
QLHN+ WG+ CPA + +G LVKN+ALM ++ + P+ + + W EFN
Sbjct: 112 QLHNTHWGMVCPA-ETPEGQACGLVKNLALMANVSTGSSSAPIQDFLQEWGMEELEEFN 169
[188][TOP]
>UniRef100_B9U334 RNA polymerase beta (Fragment) n=1 Tax=Penicillium malacaense
RepID=B9U334_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ + +R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMATLRRRNMISHEVS-LIRDIREREFKIF 206
[189][TOP]
>UniRef100_B3FH79 RNA polymerase beta (Fragment) n=1 Tax=Chaetosartorya stromatoides
RepID=B3FH79_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[190][TOP]
>UniRef100_B3FDQ5 RNA polymerase beta (Fragment) n=1 Tax=Neopetromyces muricatus
RepID=B3FDQ5_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L++ ++ +R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVQTMQGLRHKNLISHEVS-LIRDIREREFKIF 206
[191][TOP]
>UniRef100_B3FD71 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus carbonarius
RepID=B3FD71_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[192][TOP]
>UniRef100_B3FD70 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus ibericus
RepID=B3FD70_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[193][TOP]
>UniRef100_B3FC66 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus itaconicus
RepID=B3FC66_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[194][TOP]
>UniRef100_B3FC65 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus flaschentraegeri
RepID=B3FC65_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[195][TOP]
>UniRef100_B3FC63 RNA polymerase beta (Fragment) n=1 Tax=Chaetosartorya cremea
RepID=B3FC63_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[196][TOP]
>UniRef100_B3FC62 RNA polymerase beta (Fragment) n=1 Tax=Chaetosartorya stromatoides
RepID=B3FC62_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[197][TOP]
>UniRef100_B3FC61 RNA polymerase beta (Fragment) n=1 Tax=Chaetosartorya stromatoides
RepID=B3FC61_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[198][TOP]
>UniRef100_B3FC60 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus gorakhpurensis
RepID=B3FC60_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[199][TOP]
>UniRef100_B3FC53 RNA polymerase beta (Fragment) n=3 Tax=Trichocomaceae
RepID=B3FC53_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[200][TOP]
>UniRef100_B1NN30 RNA polymerase beta (Fragment) n=1 Tax=Fennellia nivea
RepID=B1NN30_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[201][TOP]
>UniRef100_B1NN27 RNA polymerase beta (Fragment) n=1 Tax=Fennellia nivea
RepID=B1NN27_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[202][TOP]
>UniRef100_B1NN22 RNA polymerase beta (Fragment) n=1 Tax=Fennellia nivea
RepID=B1NN22_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[203][TOP]
>UniRef100_B1NN18 RNA polymerase beta (Fragment) n=2 Tax=Aspergillus
RepID=B1NN18_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[204][TOP]
>UniRef100_B1NN17 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus terreus
RepID=B1NN17_ASPTE
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[205][TOP]
>UniRef100_B1NN11 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus iizukae
RepID=B1NN11_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[206][TOP]
>UniRef100_B1NN09 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus aureofulgens
RepID=B1NN09_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[207][TOP]
>UniRef100_B1NN02 RNA polymerase beta (Fragment) n=2 Tax=Trichocomaceae
RepID=B1NN02_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[208][TOP]
>UniRef100_B1NMZ6 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus janus var.
brevis RepID=B1NMZ6_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[209][TOP]
>UniRef100_B1NMZ4 RNA polymerase beta (Fragment) n=4 Tax=Trichocomaceae
RepID=B1NMZ4_ASPTE
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[210][TOP]
>UniRef100_B1NMZ3 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus terreus
RepID=B1NMZ3_ASPTE
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[211][TOP]
>UniRef100_B1NMZ2 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus janus
RepID=B1NMZ2_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[212][TOP]
>UniRef100_A9XEZ9 RNA polymerase beta (Fragment) n=1 Tax=Penicillium olsonii
RepID=A9XEZ9_PENOL
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ ++ +R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMQNLRRRNMISHEVS-LIRDIREREFKIF 206
[213][TOP]
>UniRef100_A9XEQ6 RNA polymerase beta (Fragment) n=1 Tax=Penicillium citreonigrum
RepID=A9XEQ6_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMMSLRRRNMISHEVS-LVRDIRDREFKIF 206
[214][TOP]
>UniRef100_A9XEQ5 RNA polymerase beta (Fragment) n=1 Tax=Penicillium citreonigrum
RepID=A9XEQ5_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMMSLRRRNMISHEVS-LVRDIRDREFKIF 206
[215][TOP]
>UniRef100_A9XEQ0 RNA polymerase beta (Fragment) n=1 Tax=Penicillium toxicarium
RepID=A9XEQ0_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMMSLRRRNMISHEVS-LVRDIRDREFKIF 206
[216][TOP]
>UniRef100_A9XEP8 RNA polymerase beta (Fragment) n=1 Tax=Penicillium toxicarium
RepID=A9XEP8_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMMSLRRRNMISHEVS-LVRDIRDREFKIF 206
[217][TOP]
>UniRef100_A9XEP7 RNA polymerase beta (Fragment) n=1 Tax=Penicillium toxicarium
RepID=A9XEP7_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMMSLRRRNMISHEVS-LVRDIRDREFKIF 206
[218][TOP]
>UniRef100_A9XEP1 RNA polymerase beta (Fragment) n=1 Tax=Penicillium toxicarium
RepID=A9XEP1_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMMSLRRRNMISHEVS-LVRDIRDREFKIF 206
[219][TOP]
>UniRef100_B3FC52 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus
brunneo-uniseriatus RepID=B3FC52_9EURO
Length = 337
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[220][TOP]
>UniRef100_B3F725 RNA polymerase 2 (Fragment) n=1 Tax=Penicillium cinnamopurpureum
RepID=B3F725_9EURO
Length = 337
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ + +R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVNTMATLRRRNMISHEVS-LIRDIREREFKIF 206
[221][TOP]
>UniRef100_B3FCG2 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus recurvatus
RepID=B3FCG2_9EURO
Length = 336
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ R P+ L++ ++A+R + H +R R R IF
Sbjct: 164 VWVGVHRQPSHLVETMQALRRRNMISHEVS-LIRDIREREFKIF 206
[222][TOP]
>UniRef100_B3FCA4 RNA polymerase beta (Fragment) n=10 Tax=Emericella
RepID=B3FCA4_9EURO
Length = 336
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ R P+ L++ ++A+R + H +R R R IF
Sbjct: 164 VWVGVHRQPSHLVETMQALRRRNMISHEVS-LIRDIREREFKIF 206
[223][TOP]
>UniRef100_B1NN10 RNA polymerase beta (Fragment) n=2 Tax=Aspergillus
RepID=B1NN10_9EURO
Length = 329
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 81 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 115
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 153 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 195
[224][TOP]
>UniRef100_Q1L5A6 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Linanthus californicus RepID=Q1L5A6_9ERIC
Length = 324
Score = 49.7 bits (117), Expect(2) = 5e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 93 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWSTEN 145
Score = 27.3 bits (59), Expect(2) = 5e-07
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L++ LR +R
Sbjct: 166 WVGIHRNPELLVRTLRQLR 184
[225][TOP]
>UniRef100_B1NN26 RNA polymerase beta (Fragment) n=1 Tax=Fennellia nivea
RepID=B1NN26_9EURO
Length = 277
Score = 48.1 bits (113), Expect(2) = 5e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.9 bits (63), Expect(2) = 5e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMSSLRRRNMISHEVS-LIRDIREREFKIF 206
[226][TOP]
>UniRef100_A7J568 DNA-directed RNA polymerase (Fragment) n=1 Tax=Buellia frigida
RepID=A7J568_9LECA
Length = 673
Score = 46.2 bits (108), Expect(3) = 6e-07
Identities = 20/36 (55%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCY++V
Sbjct: 101 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYVSV 135
Score = 26.6 bits (57), Expect(3) = 6e-07
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQH 310
VW+G+ R+P L+ ++A+R ++H
Sbjct: 173 VWVGVHRNPASLVSAVQALRRRHIIEH 199
Score = 23.1 bits (48), Expect(3) = 6e-07
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 153 QHVSALDECDALPTSPASTKVFIN 224
+ + L+E D + TSP +TK+F+N
Sbjct: 149 RQMEPLEEYDPI-TSPKATKIFLN 171
[227][TOP]
>UniRef100_A2QYC2 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
RepID=A2QYC2_ASPNC
Length = 1256
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 533 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 567
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 605 VWVGIHRDPAHLVNTMLSLRRRNMISHEVS-LIRDIREREFKIF 647
[228][TOP]
>UniRef100_B6HM08 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum
Wisconsin 54-1255 RepID=B6HM08_PENCW
Length = 1255
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 532 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 566
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ ++ +R + H +R R R IF
Sbjct: 604 VWVGIHRDPSHLVTTMQNLRRRNMISHEVS-LIRDIREREFKIF 646
[229][TOP]
>UniRef100_Q10G20 DNA-directed RNA polymerase n=2 Tax=Oryza sativa RepID=Q10G20_ORYSJ
Length = 1222
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + W N
Sbjct: 537 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTEN 589
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 610 WVGIHRNPDLLVKTLRRLR 628
[230][TOP]
>UniRef100_C5WR62 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5WR62_SORBI
Length = 1218
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + W N
Sbjct: 533 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTEN 585
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 606 WVGIHRNPDLLVKTLRRLR 624
[231][TOP]
>UniRef100_B9FA12 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FA12_ORYSJ
Length = 1218
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 26/54 (48%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + W N
Sbjct: 533 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTEN 585
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L+K LR +R
Sbjct: 606 WVGIHRNPDLLVKTLRRLR 624
[232][TOP]
>UniRef100_Q1L5Z3 DNA-directed RNA polymerase n=1 Tax=Antirrhinum majus
RepID=Q1L5Z3_ANTMA
Length = 1198
Score = 48.9 bits (115), Expect(2) = 7e-07
Identities = 27/54 (50%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTWSEFN 156
QLHNS WG+ CPA + +G LVKN+ALM YITV A P+ + WS N
Sbjct: 512 QLHNSHWGMMCPA-ETPEGQACGLVKNLALMVYITVGSAANPILEFLDEWSTEN 564
Score = 27.7 bits (60), Expect(2) = 7e-07
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +2
Query: 233 WLGIQRDPTVLIKNLRAMR 289
W+GI R+P +L++ LR +R
Sbjct: 585 WIGIHRNPELLVRTLRQLR 603
[233][TOP]
>UniRef100_A7XIF0 DNA-directed RNA polymerase n=1 Tax=Psilopezia deligata
RepID=A7XIF0_9PEZI
Length = 801
Score = 43.1 bits (100), Expect(2) = 7e-07
Identities = 22/41 (53%), Positives = 27/41 (65%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITVCALPL 123
QLHN+ WG+ CPA + +G LVKN+ALM YIT PL
Sbjct: 280 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMSYITRNMEPL 319
Score = 33.5 bits (75), Expect(2) = 7e-07
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L++ ++ +R TG + H +R R R IF
Sbjct: 338 VWVGIHRDPLHLVRTVQRLRRTGVISHEVS-VIRDIRDREFKIF 380
[234][TOP]
>UniRef100_Q5US60 DNA-directed RNA polymerase (Fragment) n=1 Tax=Penicillium freii
RepID=Q5US60_9EURO
Length = 705
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 109 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 143
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ ++ +R + H +R R R IF
Sbjct: 181 VWVGIHRDPSHLVTTMQNLRRRNMISHEVS-LIRDIREREFKIF 223
[235][TOP]
>UniRef100_A5H2G3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Myelochroa aurulenta
RepID=A5H2G3_9LECA
Length = 704
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 111 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 145
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQH 310
VW+G+ RDP L+ ++ +R G + H
Sbjct: 183 VWVGVHRDPAHLVGTVQNLRRRGMISH 209
[236][TOP]
>UniRef100_Q5US38 DNA-directed RNA polymerase (Fragment) n=1 Tax=Strangospora
pinicola RepID=Q5US38_9LECA
Length = 703
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 111 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 145
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ + +R G + H +R R R IF
Sbjct: 183 VWVGVHRDPAHLVSTVLNLRRRGLISHEVS-LIRDIRDREFKIF 225
[237][TOP]
>UniRef100_Q5US48 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sarcogyne regularis
var. regularis RepID=Q5US48_9LECA
Length = 702
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 103 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 137
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ + +R + H +R R R IF
Sbjct: 175 VWVGVHRDPAHLVSTVLTLRRANAISHEVS-LVRDIRDREFKIF 217
[238][TOP]
>UniRef100_Q0MT72 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Wallemia sebi RepID=Q0MT72_WALSE
Length = 374
Score = 39.3 bits (90), Expect(2) = 7e-07
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQH 310
VW+G+ RDPT L+K LR +R G +QH
Sbjct: 188 VWIGVHRDPTNLVKTLRKLRREGDIQH 214
Score = 37.4 bits (85), Expect(2) = 7e-07
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 7/59 (11%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV--CALPLCRWWRTW-----SEFN 156
QLHN+ WG+ CPA + +G LVKN+ALM ++ + P+ + + W EFN
Sbjct: 118 QLHNTHWGMVCPA-ETPEGXACGLVKNLALMANVSTGSSSAPIQDFLQEWGMEELEEFN 175
[239][TOP]
>UniRef100_B4UWV3 RNA polymerase II second largest subunit (Fragment) n=1
Tax=Alectoria ochroleuca RepID=B4UWV3_9LECA
Length = 359
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 99 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 133
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ ++ +R G + H +R R R +F
Sbjct: 171 VWVGVHRDPAHLVGTVQNLRRKGLISHEVS-LIRDIRDREFKVF 213
[240][TOP]
>UniRef100_A5PFY2 DNA-directed RNA polymerase II polypeptide 2 (Fragment) n=1
Tax=Lecania hutchinsiae RepID=A5PFY2_9LECA
Length = 351
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 90 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 124
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQH 310
VW+G+ RDP L+ +++ +R G L +
Sbjct: 162 VWVGVHRDPKNLVNDVKKLRRCGMLSY 188
[241][TOP]
>UniRef100_B3FDQ7 RNA polymerase beta (Fragment) n=2 Tax=Aspergillus
RepID=B3FDQ7_9EURO
Length = 339
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP+ L+ ++ +R + H +R R R IF
Sbjct: 164 VWVGIHRDPSHLVHTMQVLRHKSLISHEVS-LIRDIREREFKIF 206
[242][TOP]
>UniRef100_B1NNB9 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus clavatus
RepID=B1NNB9_ASPCL
Length = 338
Score = 48.5 bits (114), Expect(2) = 7e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLLCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.1 bits (61), Expect(2) = 7e-07
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+G+ RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGVHRDPAHLVNTMLSLRRRNMISHEVS-LIRDIREREFKIF 206
[243][TOP]
>UniRef100_B3FH46 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus coremiiformis
RepID=B3FH46_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMLSLRRRNMISHEVS-LIRDIREREFKIF 206
[244][TOP]
>UniRef100_B3FH45 RNA polymerase beta (Fragment) n=4 Tax=Trichocomaceae
RepID=B3FH45_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMLSLRRRNMISHEVS-LIRDIREREFKIF 206
[245][TOP]
>UniRef100_B3FE15 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus avenaceus
RepID=B3FE15_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMLSLRRRSMISHEVS-LIRDIREREFKIF 206
[246][TOP]
>UniRef100_B3FD76 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus sparsus
RepID=B3FD76_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMLSLRRRNMISHEVS-LIRDIREREFKIF 206
[247][TOP]
>UniRef100_B3FD75 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus sparsus
RepID=B3FD75_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMLSLRRRNMISHEVS-LIRDIREREFKIF 206
[248][TOP]
>UniRef100_B3FD61 RNA polymerase beta (Fragment) n=2 Tax=Aspergillus
RepID=B3FD61_ASPNG
Length = 338
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMLSLRRRNMISHEVS-LIRDIREREFKIF 206
[249][TOP]
>UniRef100_B3FD57 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus tubingensis
RepID=B3FD57_ASPTU
Length = 338
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMLSLRRRNMISHEVS-LIRDIREREFKIF 206
[250][TOP]
>UniRef100_B3FD56 RNA polymerase beta (Fragment) n=1 Tax=Aspergillus ellipticus
RepID=B3FD56_9EURO
Length = 338
Score = 48.1 bits (113), Expect(2) = 7e-07
Identities = 22/36 (61%), Positives = 27/36 (75%)
Frame = +1
Query: 1 QLHNSLWGIFCPA*DACDGHVVVLVKNMALMCYITV 108
QLHN+ WG+ CPA + +G LVKN+ALMCYITV
Sbjct: 92 QLHNTHWGLVCPA-ETPEGQACGLVKNLALMCYITV 126
Score = 28.5 bits (62), Expect(2) = 7e-07
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 230 VWLGIQRDPTVLIKNLRAMRLTGGLQHRGGHHLRCARSRSLCIF 361
VW+GI RDP L+ + ++R + H +R R R IF
Sbjct: 164 VWVGIHRDPAHLVNTMLSLRRRNMISHEVS-LIRDIREREFKIF 206