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[1][TOP] >UniRef100_A8I003 Ycf32-related subunit of photosystem II n=1 Tax=Chlamydomonas reinhardtii RepID=A8I003_CHLRE Length = 260 Score = 268 bits (686), Expect = 1e-70 Identities = 145/145 (100%), Positives = 145/145 (100%) Frame = +1 Query: 55 MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA 234 MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA Sbjct: 1 MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA 60 Query: 235 SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA 414 SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA Sbjct: 61 SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA 120 Query: 415 VPAAVGMGAAASLLFAQSAEASTEI 489 VPAAVGMGAAASLLFAQSAEASTEI Sbjct: 121 VPAAVGMGAAASLLFAQSAEASTEI 145 Score = 144 bits (364), Expect = 2e-33 Identities = 75/87 (86%), Positives = 82/87 (94%) Frame = +1 Query: 229 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 408 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 130 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVMGWVGFNIFGSLQAQLNQMDAKNK 189 Query: 409 RAVPAAVGMGAAASLLFAQSAEASTEI 489 RAVPAAVGMGAAASLLFAQSAEASTEI Sbjct: 190 RAVPAAVGMGAAASLLFAQSAEASTEI 216 Score = 95.5 bits (236), Expect = 2e-18 Identities = 47/60 (78%), Positives = 55/60 (91%) Frame = +1 Query: 229 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 408 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL+QMDAKNK Sbjct: 201 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLSQMDAKNK 260 [2][TOP] >UniRef100_A8JKA1 Ycf32-related polyprotein of photosystem II (Fragment) n=1 Tax=Chlamydomonas reinhardtii RepID=A8JKA1_CHLRE Length = 354 Score = 183 bits (465), Expect = 4e-45 Identities = 97/97 (100%), Positives = 97/97 (100%) Frame = +1 Query: 199 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 378 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA Sbjct: 1 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 60 Query: 379 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEI 489 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEI Sbjct: 61 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEI 97 Score = 144 bits (364), Expect = 2e-33 Identities = 75/87 (86%), Positives = 82/87 (94%) Frame = +1 Query: 229 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 408 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 82 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 141 Query: 409 RAVPAAVGMGAAASLLFAQSAEASTEI 489 RAVPAAVGMGAAASLLFAQSAEASTEI Sbjct: 142 RAVPAAVGMGAAASLLFAQSAEASTEI 168 Score = 144 bits (364), Expect = 2e-33 Identities = 75/87 (86%), Positives = 82/87 (94%) Frame = +1 Query: 229 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 408 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 153 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 212 Query: 409 RAVPAAVGMGAAASLLFAQSAEASTEI 489 RAVPAAVGMGAAASLLFAQSAEASTEI Sbjct: 213 RAVPAAVGMGAAASLLFAQSAEASTEI 239 Score = 144 bits (364), Expect = 2e-33 Identities = 75/87 (86%), Positives = 82/87 (94%) Frame = +1 Query: 229 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 408 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK Sbjct: 224 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 283 Query: 409 RAVPAAVGMGAAASLLFAQSAEASTEI 489 RAVPAAVGMGAAASLLFAQSAEASTEI Sbjct: 284 RAVPAAVGMGAAASLLFAQSAEASTEI 310 Score = 95.1 bits (235), Expect = 2e-18 Identities = 47/60 (78%), Positives = 54/60 (90%) Frame = +1 Query: 229 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 408 AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL QMDAKNK Sbjct: 295 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLRQMDAKNK 354 [3][TOP] >UniRef100_C1MZ88 Photosystem II PsbY protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MZ88_9CHLO Length = 279 Score = 68.2 bits (165), Expect = 3e-10 Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 4/158 (2%) Frame = +1 Query: 28 ALCLPRLVKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGT 207 ++ +P L + R+S + R LPVR A V A A + ++G Sbjct: 3 SIAMPVLSAAVSARVSVRAKVSTRGLRAVGVKPLPVRPAAVRVSASAAAESQTDDLQLGQ 62 Query: 208 VATLSSVAASWMMAGNAQAATE-LASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQL 384 A L+ A + A AA+E L+ +A D+RA I +L P +GWV +NI Q Sbjct: 63 TAALTLAGALALGTEQASAASESLSQVAGFDSRALIFLGILGPAIGWVLYNILTPGLNQF 122 Query: 385 NQMDAKN---KRAVPAAVGMGAAASLLFAQSAEASTEI 489 N M KN K+ +P +G+ AAA + A+A+TE+ Sbjct: 123 NSMQEKNARGKKGIPLGLGLSAAALAGMPEQADAATEL 160 Score = 54.7 bits (130), Expect = 3e-06 Identities = 41/92 (44%), Positives = 48/92 (52%), Gaps = 3/92 (3%) Frame = +1 Query: 223 SVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAK 402 S AA M A AATEL A D R I VPVLGWV +NI Q+ M K Sbjct: 143 SAAALAGMPEQADAATELMQTAGLDARILIFGAF-VPVLGWVAYNILKPGLNQIEDMQKK 201 Query: 403 N--KRAVPAAV-GMGAAASLLFAQSAEASTEI 489 N KR V A V G+ AAA L + A+A+TE+ Sbjct: 202 NAKKRGVAAGVTGLSAAALLGMPEQADAATEL 233 [4][TOP] >UniRef100_C1E7Y4 Photosystem II PsbY protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E7Y4_9CHLO Length = 191 Score = 64.3 bits (155), Expect = 4e-09 Identities = 42/90 (46%), Positives = 51/90 (56%), Gaps = 2/90 (2%) Frame = +1 Query: 223 SVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQM--D 396 S AA M A AATE LA D R I VPVLGWVG+NI G QL +M D Sbjct: 56 SAAALMGMPEAADAATEAMQLADLDARIAIFGAF-VPVLGWVGYNILGPGLKQLEKMQQD 114 Query: 397 AKNKRAVPAAVGMGAAASLLFAQSAEASTE 486 A K+ V A VG+ AAA + ++A+A+TE Sbjct: 115 AAKKKGVAAGVGLSAAALMGMPEAADAATE 144 [5][TOP] >UniRef100_A9U315 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U315_PHYPA Length = 137 Score = 63.5 bits (153), Expect = 7e-09 Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 1/97 (1%) Frame = +1 Query: 199 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 378 V V T ++ A+ + +A A+ ++ +LA DNR L L+P +GWV FNI LQ Sbjct: 2 VNLVCTTGAMFAAMATSESAMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNI---LQP 58 Query: 379 QLNQMD-AKNKRAVPAAVGMGAAASLLFAQSAEASTE 486 LNQ+D + +A+ A G+GAAA+L+ A A+A+ E Sbjct: 59 ALNQVDKMRGAKALVAGAGLGAAATLMAAPHADAAQE 95 [6][TOP] >UniRef100_Q00Y99 Manganese-binding protein PsbY, photosystem II-associated-s (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00Y99_OSTTA Length = 265 Score = 59.7 bits (143), Expect = 1e-07 Identities = 50/149 (33%), Positives = 68/149 (45%), Gaps = 2/149 (1%) Frame = +1 Query: 49 VKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSV 228 V + ALR S A R R AK R A+ S V A+ E S+ Sbjct: 5 VNVPALRASRAAPLAKRE--RRAK-----RTAIASKVATKVATIESDEIVTRGQTAAMSL 57 Query: 229 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN- 405 AA+ + A A AA E+ LA D R I + PVLGWV +NI G Q M KN Sbjct: 58 AATMLFADQAHAAQEVGDLAGIDGRIAIFF-VFAPVLGWVAYNILGPGLRQFEDMQKKNA 116 Query: 406 -KRAVPAAVGMGAAASLLFAQSAEASTEI 489 + V A G+ AAA L ++++A+ ++ Sbjct: 117 KSKGVLAGAGLSAAALLGMPEASDAAEKL 145 [7][TOP] >UniRef100_A9SPH7 PsbY photosystem II polypeptide n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SPH7_PHYPA Length = 368 Score = 58.5 bits (140), Expect = 2e-07 Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 12/109 (11%) Frame = +1 Query: 196 KVGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQ 375 K G + L AS +A +A AA E+A+LA SD+R I+ LL+P +GWV FNI Sbjct: 205 KRGVIGALGLGTASLFLAPHADAAQEIATLADSDSRGLIIIGLLLPAVGWVLFNILKPAL 264 Query: 376 AQLNQMDAKNKRAVP-----------AAVGMGAAA-SLLFAQSAEASTE 486 Q+N + N P A G+ AAA SLL A A+A + Sbjct: 265 NQINNIVEGNDTGAPVKRGKKFGGMIGATGISAAAMSLLAAPKADAQVQ 313 Score = 55.1 bits (131), Expect = 2e-06 Identities = 48/148 (32%), Positives = 73/148 (49%), Gaps = 2/148 (1%) Frame = +1 Query: 52 KMAALRMSAPTSAALRSSVRSAKPVLPVR-RAVRSVVVRAQASEEQLGFKVGTVATLSSV 228 K+ ALR S ++ + V V RAV + + VG A ++ Sbjct: 11 KLTALRRSNAFGVGVQGIRATNLKVSAVSTRAVPCAKLSTSSDGVAQQISVGANALAGAM 70 Query: 229 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMD-AKN 405 A+ + +A A+ ++ +LA DNR L LVP +GWV FNI L+ LNQ+D K Sbjct: 71 FAAMATSESALASQQIMALAEGDNRVVALLIPLVPAIGWVLFNI---LKPALNQVDKMKA 127 Query: 406 KRAVPAAVGMGAAASLLFAQSAEASTEI 489 +++ A G+GA A L+ A A+A+ EI Sbjct: 128 AKSLVAGAGLGALA-LVAAPHADAAQEI 154 Score = 54.3 bits (129), Expect = 4e-06 Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 7/94 (7%) Frame = +1 Query: 229 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNI-------FGSLQAQLN 387 A + + A +A AA E+A +A SD R I+ LL+P +GWV FNI +Q Q N Sbjct: 139 ALALVAAPHADAAQEIAQVADSDARGLIIIGLLLPAVGWVLFNILRPALNQIEKMQDQGN 198 Query: 388 QMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEI 489 KR V A+G+G ASL A A+A+ EI Sbjct: 199 AAAITRKRGVIGALGLG-TASLFLAPHADAAQEI 231 [8][TOP] >UniRef100_B6SQV2 Photosystem II core complex proteins psbY n=1 Tax=Zea mays RepID=B6SQV2_MAIZE Length = 191 Score = 57.4 bits (137), Expect = 5e-07 Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 2/150 (1%) Frame = +1 Query: 46 LVKMAALRMSAPTSAALRSSVRSAKPVLPVR--RAVRSVVVRAQASEEQLGFKVGTVATL 219 + MA L+ +A +A S S L VR +A + + AS G A L Sbjct: 4 IATMALLKPAAKAAARSAPSTSSGSVSLRVRTGQAAKKAALSVSASSTLAG------AFL 57 Query: 220 SSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDA 399 +++A+S +A A A+ A D+R +L ++ P +GWV +NI QLN+M Sbjct: 58 AALASS----PDAALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRM-- 111 Query: 400 KNKRAVPAAVGMGAAASLLFAQSAEASTEI 489 ++ +AV A +G+GAAA+ A EAS + Sbjct: 112 RSSQAVAAGLGLGAAAAAGMAAPPEASAAV 141 [9][TOP] >UniRef100_B6SUJ7 Photosystem II core complex proteins psbY n=1 Tax=Zea mays RepID=B6SUJ7_MAIZE Length = 196 Score = 57.0 bits (136), Expect = 6e-07 Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 2/147 (1%) Frame = +1 Query: 46 LVKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRS--VVVRAQASEEQLGFKVGTVATL 219 + +A + + P RS+ S + +R R+ V A S G +A+ Sbjct: 1 MATIATMALLKPARIVARSAPPSTSGSVSLRVPARAKKAAVSASVSSALAGAFFSALASS 60 Query: 220 SSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDA 399 + A+ +A A AA A SDNR +L ++ P +GWV +NI LQ LNQ++ Sbjct: 61 DAALAAQRVADVAAAAD-----AGSDNRGQLLLFVVAPAIGWVLYNI---LQPALNQLNR 112 Query: 400 KNKRAVPAAVGMGAAASLLFAQSAEAS 480 +AV A +G+GAAA+ + A + EAS Sbjct: 113 MRSQAVVAGLGLGAAAAGM-AAAPEAS 138 [10][TOP] >UniRef100_A4S5C8 Possible psbY, PSII-Y, photosystem II polypeptide n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S5C8_OSTLU Length = 416 Score = 55.5 bits (132), Expect = 2e-06 Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 6/148 (4%) Frame = +1 Query: 64 LRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWM 243 + + A A R + R+A+ + RA S VV + + + + G A +++ AAS Sbjct: 9 ITLPARAPARARRTARTAQSARVIARARTSAVVEDEFATDDDVVRRGQTAAMAT-AASMF 67 Query: 244 MAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN-----K 408 A A AA EL A D R I + PVLGWV +NI QL M A N K Sbjct: 68 FADRADAAQELMQTAL-DGRPLIFLAVFGPVLGWVAYNILSPGLRQLENMQAVNAKSSKK 126 Query: 409 RAVPA-AVGMGAAASLLFAQSAEASTEI 489 RA A A G+ A+A + ++++A+ + Sbjct: 127 RAAGALAGGLTASALMGMPEASDAAQNV 154