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[1][TOP]
>UniRef100_A8I003 Ycf32-related subunit of photosystem II n=1 Tax=Chlamydomonas
reinhardtii RepID=A8I003_CHLRE
Length = 260
Score = 268 bits (686), Expect = 1e-70
Identities = 145/145 (100%), Positives = 145/145 (100%)
Frame = +1
Query: 55 MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA 234
MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA
Sbjct: 1 MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA 60
Query: 235 SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA 414
SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA
Sbjct: 61 SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA 120
Query: 415 VPAAVGMGAAASLLFAQSAEASTEI 489
VPAAVGMGAAASLLFAQSAEASTEI
Sbjct: 121 VPAAVGMGAAASLLFAQSAEASTEI 145
Score = 144 bits (364), Expect = 2e-33
Identities = 75/87 (86%), Positives = 82/87 (94%)
Frame = +1
Query: 229 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 408
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 130 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVMGWVGFNIFGSLQAQLNQMDAKNK 189
Query: 409 RAVPAAVGMGAAASLLFAQSAEASTEI 489
RAVPAAVGMGAAASLLFAQSAEASTEI
Sbjct: 190 RAVPAAVGMGAAASLLFAQSAEASTEI 216
Score = 95.5 bits (236), Expect = 2e-18
Identities = 47/60 (78%), Positives = 55/60 (91%)
Frame = +1
Query: 229 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 408
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL+QMDAKNK
Sbjct: 201 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLSQMDAKNK 260
[2][TOP]
>UniRef100_A8JKA1 Ycf32-related polyprotein of photosystem II (Fragment) n=1
Tax=Chlamydomonas reinhardtii RepID=A8JKA1_CHLRE
Length = 354
Score = 183 bits (465), Expect = 4e-45
Identities = 97/97 (100%), Positives = 97/97 (100%)
Frame = +1
Query: 199 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 378
VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA
Sbjct: 1 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 60
Query: 379 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEI 489
QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEI
Sbjct: 61 QLNQMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEI 97
Score = 144 bits (364), Expect = 2e-33
Identities = 75/87 (86%), Positives = 82/87 (94%)
Frame = +1
Query: 229 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 408
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 82 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 141
Query: 409 RAVPAAVGMGAAASLLFAQSAEASTEI 489
RAVPAAVGMGAAASLLFAQSAEASTEI
Sbjct: 142 RAVPAAVGMGAAASLLFAQSAEASTEI 168
Score = 144 bits (364), Expect = 2e-33
Identities = 75/87 (86%), Positives = 82/87 (94%)
Frame = +1
Query: 229 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 408
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 153 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 212
Query: 409 RAVPAAVGMGAAASLLFAQSAEASTEI 489
RAVPAAVGMGAAASLLFAQSAEASTEI
Sbjct: 213 RAVPAAVGMGAAASLLFAQSAEASTEI 239
Score = 144 bits (364), Expect = 2e-33
Identities = 75/87 (86%), Positives = 82/87 (94%)
Frame = +1
Query: 229 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 408
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 224 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 283
Query: 409 RAVPAAVGMGAAASLLFAQSAEASTEI 489
RAVPAAVGMGAAASLLFAQSAEASTEI
Sbjct: 284 RAVPAAVGMGAAASLLFAQSAEASTEI 310
Score = 95.1 bits (235), Expect = 2e-18
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +1
Query: 229 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 408
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL QMDAKNK
Sbjct: 295 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLRQMDAKNK 354
[3][TOP]
>UniRef100_C1MZ88 Photosystem II PsbY protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MZ88_9CHLO
Length = 279
Score = 68.2 bits (165), Expect = 3e-10
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 4/158 (2%)
Frame = +1
Query: 28 ALCLPRLVKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGT 207
++ +P L + R+S + R LPVR A V A A + ++G
Sbjct: 3 SIAMPVLSAAVSARVSVRAKVSTRGLRAVGVKPLPVRPAAVRVSASAAAESQTDDLQLGQ 62
Query: 208 VATLSSVAASWMMAGNAQAATE-LASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQL 384
A L+ A + A AA+E L+ +A D+RA I +L P +GWV +NI Q
Sbjct: 63 TAALTLAGALALGTEQASAASESLSQVAGFDSRALIFLGILGPAIGWVLYNILTPGLNQF 122
Query: 385 NQMDAKN---KRAVPAAVGMGAAASLLFAQSAEASTEI 489
N M KN K+ +P +G+ AAA + A+A+TE+
Sbjct: 123 NSMQEKNARGKKGIPLGLGLSAAALAGMPEQADAATEL 160
Score = 54.7 bits (130), Expect = 3e-06
Identities = 41/92 (44%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Frame = +1
Query: 223 SVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAK 402
S AA M A AATEL A D R I VPVLGWV +NI Q+ M K
Sbjct: 143 SAAALAGMPEQADAATELMQTAGLDARILIFGAF-VPVLGWVAYNILKPGLNQIEDMQKK 201
Query: 403 N--KRAVPAAV-GMGAAASLLFAQSAEASTEI 489
N KR V A V G+ AAA L + A+A+TE+
Sbjct: 202 NAKKRGVAAGVTGLSAAALLGMPEQADAATEL 233
[4][TOP]
>UniRef100_C1E7Y4 Photosystem II PsbY protein n=1 Tax=Micromonas sp. RCC299
RepID=C1E7Y4_9CHLO
Length = 191
Score = 64.3 bits (155), Expect = 4e-09
Identities = 42/90 (46%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = +1
Query: 223 SVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQM--D 396
S AA M A AATE LA D R I VPVLGWVG+NI G QL +M D
Sbjct: 56 SAAALMGMPEAADAATEAMQLADLDARIAIFGAF-VPVLGWVGYNILGPGLKQLEKMQQD 114
Query: 397 AKNKRAVPAAVGMGAAASLLFAQSAEASTE 486
A K+ V A VG+ AAA + ++A+A+TE
Sbjct: 115 AAKKKGVAAGVGLSAAALMGMPEAADAATE 144
[5][TOP]
>UniRef100_A9U315 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U315_PHYPA
Length = 137
Score = 63.5 bits (153), Expect = 7e-09
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Frame = +1
Query: 199 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 378
V V T ++ A+ + +A A+ ++ +LA DNR L L+P +GWV FNI LQ
Sbjct: 2 VNLVCTTGAMFAAMATSESAMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNI---LQP 58
Query: 379 QLNQMD-AKNKRAVPAAVGMGAAASLLFAQSAEASTE 486
LNQ+D + +A+ A G+GAAA+L+ A A+A+ E
Sbjct: 59 ALNQVDKMRGAKALVAGAGLGAAATLMAAPHADAAQE 95
[6][TOP]
>UniRef100_Q00Y99 Manganese-binding protein PsbY, photosystem II-associated-s (ISS)
n=1 Tax=Ostreococcus tauri RepID=Q00Y99_OSTTA
Length = 265
Score = 59.7 bits (143), Expect = 1e-07
Identities = 50/149 (33%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Frame = +1
Query: 49 VKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSV 228
V + ALR S A R R AK R A+ S V A+ E S+
Sbjct: 5 VNVPALRASRAAPLAKRE--RRAK-----RTAIASKVATKVATIESDEIVTRGQTAAMSL 57
Query: 229 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN- 405
AA+ + A A AA E+ LA D R I + PVLGWV +NI G Q M KN
Sbjct: 58 AATMLFADQAHAAQEVGDLAGIDGRIAIFF-VFAPVLGWVAYNILGPGLRQFEDMQKKNA 116
Query: 406 -KRAVPAAVGMGAAASLLFAQSAEASTEI 489
+ V A G+ AAA L ++++A+ ++
Sbjct: 117 KSKGVLAGAGLSAAALLGMPEASDAAEKL 145
[7][TOP]
>UniRef100_A9SPH7 PsbY photosystem II polypeptide n=1 Tax=Physcomitrella patens
subsp. patens RepID=A9SPH7_PHYPA
Length = 368
Score = 58.5 bits (140), Expect = 2e-07
Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 12/109 (11%)
Frame = +1
Query: 196 KVGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQ 375
K G + L AS +A +A AA E+A+LA SD+R I+ LL+P +GWV FNI
Sbjct: 205 KRGVIGALGLGTASLFLAPHADAAQEIATLADSDSRGLIIIGLLLPAVGWVLFNILKPAL 264
Query: 376 AQLNQMDAKNKRAVP-----------AAVGMGAAA-SLLFAQSAEASTE 486
Q+N + N P A G+ AAA SLL A A+A +
Sbjct: 265 NQINNIVEGNDTGAPVKRGKKFGGMIGATGISAAAMSLLAAPKADAQVQ 313
Score = 55.1 bits (131), Expect = 2e-06
Identities = 48/148 (32%), Positives = 73/148 (49%), Gaps = 2/148 (1%)
Frame = +1
Query: 52 KMAALRMSAPTSAALRSSVRSAKPVLPVR-RAVRSVVVRAQASEEQLGFKVGTVATLSSV 228
K+ ALR S ++ + V V RAV + + VG A ++
Sbjct: 11 KLTALRRSNAFGVGVQGIRATNLKVSAVSTRAVPCAKLSTSSDGVAQQISVGANALAGAM 70
Query: 229 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMD-AKN 405
A+ + +A A+ ++ +LA DNR L LVP +GWV FNI L+ LNQ+D K
Sbjct: 71 FAAMATSESALASQQIMALAEGDNRVVALLIPLVPAIGWVLFNI---LKPALNQVDKMKA 127
Query: 406 KRAVPAAVGMGAAASLLFAQSAEASTEI 489
+++ A G+GA A L+ A A+A+ EI
Sbjct: 128 AKSLVAGAGLGALA-LVAAPHADAAQEI 154
Score = 54.3 bits (129), Expect = 4e-06
Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 7/94 (7%)
Frame = +1
Query: 229 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNI-------FGSLQAQLN 387
A + + A +A AA E+A +A SD R I+ LL+P +GWV FNI +Q Q N
Sbjct: 139 ALALVAAPHADAAQEIAQVADSDARGLIIIGLLLPAVGWVLFNILRPALNQIEKMQDQGN 198
Query: 388 QMDAKNKRAVPAAVGMGAAASLLFAQSAEASTEI 489
KR V A+G+G ASL A A+A+ EI
Sbjct: 199 AAAITRKRGVIGALGLG-TASLFLAPHADAAQEI 231
[8][TOP]
>UniRef100_B6SQV2 Photosystem II core complex proteins psbY n=1 Tax=Zea mays
RepID=B6SQV2_MAIZE
Length = 191
Score = 57.4 bits (137), Expect = 5e-07
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 2/150 (1%)
Frame = +1
Query: 46 LVKMAALRMSAPTSAALRSSVRSAKPVLPVR--RAVRSVVVRAQASEEQLGFKVGTVATL 219
+ MA L+ +A +A S S L VR +A + + AS G A L
Sbjct: 4 IATMALLKPAAKAAARSAPSTSSGSVSLRVRTGQAAKKAALSVSASSTLAG------AFL 57
Query: 220 SSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDA 399
+++A+S +A A A+ A D+R +L ++ P +GWV +NI QLN+M
Sbjct: 58 AALASS----PDAALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRM-- 111
Query: 400 KNKRAVPAAVGMGAAASLLFAQSAEASTEI 489
++ +AV A +G+GAAA+ A EAS +
Sbjct: 112 RSSQAVAAGLGLGAAAAAGMAAPPEASAAV 141
[9][TOP]
>UniRef100_B6SUJ7 Photosystem II core complex proteins psbY n=1 Tax=Zea mays
RepID=B6SUJ7_MAIZE
Length = 196
Score = 57.0 bits (136), Expect = 6e-07
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 2/147 (1%)
Frame = +1
Query: 46 LVKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRS--VVVRAQASEEQLGFKVGTVATL 219
+ +A + + P RS+ S + +R R+ V A S G +A+
Sbjct: 1 MATIATMALLKPARIVARSAPPSTSGSVSLRVPARAKKAAVSASVSSALAGAFFSALASS 60
Query: 220 SSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDA 399
+ A+ +A A AA A SDNR +L ++ P +GWV +NI LQ LNQ++
Sbjct: 61 DAALAAQRVADVAAAAD-----AGSDNRGQLLLFVVAPAIGWVLYNI---LQPALNQLNR 112
Query: 400 KNKRAVPAAVGMGAAASLLFAQSAEAS 480
+AV A +G+GAAA+ + A + EAS
Sbjct: 113 MRSQAVVAGLGLGAAAAGM-AAAPEAS 138
[10][TOP]
>UniRef100_A4S5C8 Possible psbY, PSII-Y, photosystem II polypeptide n=1
Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S5C8_OSTLU
Length = 416
Score = 55.5 bits (132), Expect = 2e-06
Identities = 47/148 (31%), Positives = 71/148 (47%), Gaps = 6/148 (4%)
Frame = +1
Query: 64 LRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWM 243
+ + A A R + R+A+ + RA S VV + + + + G A +++ AAS
Sbjct: 9 ITLPARAPARARRTARTAQSARVIARARTSAVVEDEFATDDDVVRRGQTAAMAT-AASMF 67
Query: 244 MAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN-----K 408
A A AA EL A D R I + PVLGWV +NI QL M A N K
Sbjct: 68 FADRADAAQELMQTAL-DGRPLIFLAVFGPVLGWVAYNILSPGLRQLENMQAVNAKSSKK 126
Query: 409 RAVPA-AVGMGAAASLLFAQSAEASTEI 489
RA A A G+ A+A + ++++A+ +
Sbjct: 127 RAAGALAGGLTASALMGMPEASDAAQNV 154