AV642381 ( HCL050h04_r )

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[1][TOP]
>UniRef100_Q6SA05 Rubisco activase n=1 Tax=Chlamydomonas reinhardtii
           RepID=Q6SA05_CHLRE
          Length = 408

 Score =  300 bits (767), Expect = 5e-80
 Identities = 151/154 (98%), Positives = 151/154 (98%)
 Frame = +2

Query: 47  MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 226
           MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT
Sbjct: 1   MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 60

Query: 227 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 406
           RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK
Sbjct: 61  RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 120

Query: 407 NFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           NFMDLPKIKVPLILGIWGGKGQ K  QCALAYKK
Sbjct: 121 NFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKK 154

[2][TOP]
>UniRef100_P23489 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Chlamydomonas reinhardtii RepID=RCA_CHLRE
          Length = 408

 Score =  298 bits (762), Expect = 2e-79
 Identities = 150/154 (97%), Positives = 150/154 (97%)
 Frame = +2

Query: 47  MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 226
           MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVA SRKQMGRWRSIDAGVDASDDQQDIT
Sbjct: 1   MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVAPSRKQMGRWRSIDAGVDASDDQQDIT 60

Query: 227 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 406
           RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK
Sbjct: 61  RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 120

Query: 407 NFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           NFMDLPKIKVPLILGIWGGKGQ K  QCALAYKK
Sbjct: 121 NFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKK 154

[3][TOP]
>UniRef100_O04772 Rubisco activase n=1 Tax=Chlorococcum littorale RepID=O04772_CHLLO
          Length = 403

 Score =  206 bits (523), Expect = 9e-52
 Identities = 103/154 (66%), Positives = 122/154 (79%)
 Frame = +2

Query: 47  MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 226
           MQ+ MK++A    +  GA+ A ++VR   +    +S+ Q GRW +IDAG D SDDQQDIT
Sbjct: 1   MQMQMKNTAF---KATGAKTAPKAVR---VPACKASKSQAGRWAAIDAGNDMSDDQQDIT 54

Query: 227 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 406
           RGR+MVD LFQG    GGTH+AVLSS++YLS +  +FNN+EDGFYISPAFLDKMTIH+AK
Sbjct: 55  RGRDMVDSLFQGPGSGGGTHSAVLSSEDYLSTASRNFNNVEDGFYISPAFLDKMTIHVAK 114

Query: 407 NFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           NFMDLPKIKVPLILGIWGGKGQ K  QCALAYKK
Sbjct: 115 NFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKK 148

[4][TOP]
>UniRef100_C1E4S4 Ribulose bisphosphate carboxylase/oxygenase activase,chloroplast
           n=1 Tax=Micromonas sp. RCC299 RepID=C1E4S4_9CHLO
          Length = 413

 Score =  152 bits (384), Expect = 1e-35
 Identities = 74/121 (61%), Positives = 87/121 (71%), Gaps = 1/121 (0%)
 Frame = +2

Query: 149 SSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSR 328
           S    M RW+ +D   D SDDQQDI RGR MVD  FQGGFG GGTHNAV+SS +Y+S   
Sbjct: 38  SKTVMMSRWKGMDE--DISDDQQDIARGRNMVDSKFQGGFGLGGTHNAVMSSSDYVSDGF 95

Query: 329 ASFNNIED-GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYK 505
              +N+ D G+YIS  F+D+  +HIAKNFMDLPKIKVPLILG+WGGKGQ K  Q  L +K
Sbjct: 96  KDVSNMTDEGYYISKGFMDRFCVHIAKNFMDLPKIKVPLILGVWGGKGQGKTFQSMLIFK 155

Query: 506 K 508
           K
Sbjct: 156 K 156

[5][TOP]
>UniRef100_C1MPQ3 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast
           n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MPQ3_9CHLO
          Length = 419

 Score =  152 bits (383), Expect = 2e-35
 Identities = 81/160 (50%), Positives = 102/160 (63%), Gaps = 8/160 (5%)
 Frame = +2

Query: 53  VTMKSSAVSGQRVGGARVATRSVRRAQLQVVASS-------RKQMGRWRSIDAGVDASDD 211
           VTM S      ++G    A   V R QL  V +        + QM RW+ +D   D SDD
Sbjct: 4   VTMSSMIAPVAKIG----AVGKVARHQLGSVPNQLGKGNGMKVQMSRWKGMDE--DISDD 57

Query: 212 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIED-GFYISPAFLDKM 388
           QQDI RGR MVD  FQGGFG GGT NA++   +Y+S      +N+ D G+YIS +++DK+
Sbjct: 58  QQDIARGRGMVDSKFQGGFGLGGTQNAIMQGSDYVSDGFKDLSNMSDEGYYISKSYMDKI 117

Query: 389 TIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           T+H+AKNFMDLPKIKVPLILGIWGGKGQ K  Q  L +K+
Sbjct: 118 TVHVAKNFMDLPKIKVPLILGIWGGKGQGKTFQSTLIFKR 157

[6][TOP]
>UniRef100_A4RW20 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4RW20_OSTLU
          Length = 415

 Score =  150 bits (380), Expect = 4e-35
 Identities = 77/157 (49%), Positives = 102/157 (64%), Gaps = 5/157 (3%)
 Frame = +2

Query: 53  VTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRK-QMGRWRSIDAGVDASDDQQDITR 229
           +T     V         VA ++   A++  V++  K +M RW+ +D  +D SDDQQDI R
Sbjct: 4   ITQPRCGVKANATAKRAVAPKTFLGARVSSVSNGSKVEMSRWKGMD--MDISDDQQDIAR 61

Query: 230 GREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASF----NNIEDGFYISPAFLDKMTIH 397
           GR MVD  FQG  G GGTHNAV+SSQ+YLS    ++    N   + FYISP+++DK+ +H
Sbjct: 62  GRNMVDSKFQGATGIGGTHNAVMSSQDYLSAGMKTYSAHDNITTENFYISPSYMDKVIVH 121

Query: 398 IAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           +AKNFM LPKIKVP+ILG+WGGKGQ K  Q  L +KK
Sbjct: 122 VAKNFMKLPKIKVPVILGVWGGKGQGKTFQSDLIFKK 158

[7][TOP]
>UniRef100_A9RES5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RES5_PHYPA
          Length = 477

 Score =  149 bits (376), Expect = 1e-34
 Identities = 87/172 (50%), Positives = 109/172 (63%), Gaps = 3/172 (1%)
 Frame = +2

Query: 2   PSTTFRPFI-QSALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWR 178
           PST  +  +  SA    +  + +SA  G   G +RV             A S K++ RW 
Sbjct: 22  PSTVGKSAVPSSAFLGCKSKVPASAALGLAKGKSRVVAE----------AESSKKVDRWA 71

Query: 179 SIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIED 352
            +  G D SDDQQDI RG+ +VD LFQG  G G T NAVLSS +Y+SQ + +++  NI+D
Sbjct: 72  GL--GTDISDDQQDIQRGKGLVDALFQGPQGMG-TQNAVLSSWDYISQGQRTYSMDNIKD 128

Query: 353 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           G YI+PAF+DK+ IHIAKNFMDLP IKVPLILGIWGGKGQ K+ QC L   K
Sbjct: 129 GLYIAPAFMDKLVIHIAKNFMDLPGIKVPLILGIWGGKGQGKSFQCELVMSK 180

[8][TOP]
>UniRef100_Q01AY1 RuBisCO activase (IC) n=1 Tax=Ostreococcus tauri RepID=Q01AY1_OSTTA
          Length = 407

 Score =  149 bits (375), Expect = 1e-34
 Identities = 81/161 (50%), Positives = 105/161 (65%), Gaps = 4/161 (2%)
 Frame = +2

Query: 38  LRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQ 217
           +R    T K  AV+ +   GARV++         V   S+ +M RW+ +D  +D SDDQQ
Sbjct: 1   MRQANATTKR-AVAPKTFLGARVSS---------VSNGSKVEMSRWKGMD--MDISDDQQ 48

Query: 218 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASF----NNIEDGFYISPAFLDK 385
           DI RG+ MVD  FQGG G GGTHNAV+SSQ+YLS    ++    N   + FYIS +++DK
Sbjct: 49  DIARGKNMVDSKFQGGAGIGGTHNAVMSSQDYLSAGMKTYDGHDNITAENFYISKSYMDK 108

Query: 386 MTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           + +HIAKNFM LPKIKVPLILG+WGGKGQ K  Q  L ++K
Sbjct: 109 VVVHIAKNFMQLPKIKVPLILGVWGGKGQGKTFQSDLIFRK 149

[9][TOP]
>UniRef100_O98997 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Vigna radiata var. radiata RepID=RCA_PHAAU
          Length = 439

 Score =  149 bits (375), Expect = 1e-34
 Identities = 78/143 (54%), Positives = 96/143 (67%), Gaps = 2/143 (1%)
 Frame = +2

Query: 86  RVGGARVATRSVR--RAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQ 259
           RV  ++V   S +   A+ ++  S +    RW+ +    D SDDQQDITRG+ MVD LFQ
Sbjct: 44  RVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGL--AYDISDDQQDITRGKGMVDPLFQ 101

Query: 260 GGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVP 439
               AG TH AV+SS EYLS      +NI+DGFYI+PAFLDK+ +HI KNFM LP IKVP
Sbjct: 102 APMDAG-THYAVMSSYEYLSTGLRQLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVP 160

Query: 440 LILGIWGGKGQDKNLQCALAYKK 508
           LILGIWGGKGQ K+ QC L + K
Sbjct: 161 LILGIWGGKGQGKSFQCELVFAK 183

[10][TOP]
>UniRef100_B9HMK4 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
           RepID=B9HMK4_POPTR
          Length = 438

 Score =  147 bits (371), Expect = 4e-34
 Identities = 82/161 (50%), Positives = 103/161 (63%), Gaps = 10/161 (6%)
 Frame = +2

Query: 56  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVASS-----RKQMGRWRSIDAGVDASDD 211
           T+ +SA  G   ++V  +R     +     +VVA       + +  RW  +    D SDD
Sbjct: 26  TVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVT--DMSDD 83

Query: 212 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDK 385
           QQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DGFYI+PAF+DK
Sbjct: 84  QQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGFYIAPAFMDK 142

Query: 386 MTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           + +HI+KNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 143 IVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK 183

[11][TOP]
>UniRef100_B1PDJ9 Chloroplast rubisco activase n=1 Tax=Capsicum annuum
           RepID=B1PDJ9_CAPAN
          Length = 439

 Score =  147 bits (371), Expect = 4e-34
 Identities = 75/149 (50%), Positives = 101/149 (67%), Gaps = 4/149 (2%)
 Frame = +2

Query: 74  VSGQRVGGARVATRSVRRAQLQVVASSRKQMG--RWRSIDAGVDASDDQQDITRGREMVD 247
           V G+ +   +V+ RS+R    +     +KQ    RW+ +  G D SDDQQDI RG+ MVD
Sbjct: 40  VYGKGISSPKVSNRSLRIVAEEKEIDEKKQTDGDRWKGL--GTDVSDDQQDIARGKGMVD 97

Query: 248 DLFQGGFGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDL 421
            LFQ   G G TH+A+++S EYLSQ   + S +N  DGFYI+PAF+DK+ +HI KNF+ L
Sbjct: 98  SLFQAPTGTG-THHAIMNSYEYLSQGLKQYSMDNKLDGFYIAPAFMDKLVVHITKNFLQL 156

Query: 422 PKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           P IK+PLILG+WGGKGQ K+ QC L ++K
Sbjct: 157 PNIKIPLILGVWGGKGQGKSFQCELVFRK 185

[12][TOP]
>UniRef100_A9PFQ2 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=A9PFQ2_POPTR
          Length = 475

 Score =  147 bits (371), Expect = 4e-34
 Identities = 82/161 (50%), Positives = 103/161 (63%), Gaps = 10/161 (6%)
 Frame = +2

Query: 56  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVASS-----RKQMGRWRSIDAGVDASDD 211
           T+ +SA  G   ++V  +R     +     +VVA       + +  RW  +    D SDD
Sbjct: 26  TVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVT--DMSDD 83

Query: 212 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDK 385
           QQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DGFYI+PAF+DK
Sbjct: 84  QQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGFYIAPAFMDK 142

Query: 386 MTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           + +HI+KNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 143 IVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK 183

[13][TOP]
>UniRef100_Q40460 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic n=1 Tax=Nicotiana tabacum RepID=RCA1_TOBAC
          Length = 442

 Score =  147 bits (370), Expect = 5e-34
 Identities = 79/149 (53%), Positives = 99/149 (66%), Gaps = 4/149 (2%)
 Frame = +2

Query: 74  VSGQRVGGARVATRSVRRAQLQVVASSRKQMG--RWRSIDAGVDASDDQQDITRGREMVD 247
           V G+ V   +V  +S+R    Q+    +KQ    RW+ +    D SDDQQDITRG+ MVD
Sbjct: 40  VYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQ--DFSDDQQDITRGKGMVD 97

Query: 248 DLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDL 421
            LFQ   G G TH+AVL S EY+SQ    +N  N  DGFYI+PAF+DK+ +HI KNF+ L
Sbjct: 98  SLFQAPTGTG-THHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKL 156

Query: 422 PKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           P IKVPLILGIWGGKGQ K+ QC L ++K
Sbjct: 157 PNIKVPLILGIWGGKGQGKSFQCELVFRK 185

[14][TOP]
>UniRef100_A9TJI2 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TJI2_PHYPA
          Length = 471

 Score =  146 bits (369), Expect = 7e-34
 Identities = 82/156 (52%), Positives = 106/156 (67%), Gaps = 5/156 (3%)
 Frame = +2

Query: 56  TMKSSAVSGQRVGGARVATRSVRRAQLQVVA---SSRKQMGRWRSIDAGVDASDDQQDIT 226
           T+ SSA  G +   +   T  +   + +VVA   SS+ ++ RW  +  G D SDDQQDI 
Sbjct: 21  TVPSSAFFGCKSKVSANGTLGIANGKSRVVAEAESSKTKVDRWAGL--GNDISDDQQDIQ 78

Query: 227 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHI 400
           RG+ MVD LFQG  G G T NA++SS  Y+SQ + +++  NI+DG YI+PAF+DK+ IHI
Sbjct: 79  RGKGMVDALFQGAQGLG-TQNAIMSSWGYVSQGQRTYSMDNIKDGLYIAPAFMDKLVIHI 137

Query: 401 AKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           AKNFM+LP IKVPLILGIWGGKGQ K+ QC L   K
Sbjct: 138 AKNFMNLPGIKVPLILGIWGGKGQGKSFQCELVMSK 173

[15][TOP]
>UniRef100_O64981 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Phaseolus vulgaris RepID=RCA_PHAVU
          Length = 441

 Score =  146 bits (369), Expect = 7e-34
 Identities = 81/160 (50%), Positives = 106/160 (66%), Gaps = 12/160 (7%)
 Frame = +2

Query: 65  SSAVSG---QRVGGARVATRSVRRAQLQVVASSRK-------QMGRWRSIDAGVDASDDQ 214
           SSA  G   ++V  +RV    +     ++VA+ ++       +  RWR +    D SDDQ
Sbjct: 29  SSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGL--AYDVSDDQ 86

Query: 215 QDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKM 388
           QDITRG+ +VD LFQ    AG TH AV+SS +YLS    + +F+NI+DGFYI+PAFLDK+
Sbjct: 87  QDITRGKGLVDSLFQAPMDAG-THYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKL 145

Query: 389 TIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
            +HIAKNFM LP IKVPLILG+WGGKGQ K+ QC L + K
Sbjct: 146 VVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAK 185

[16][TOP]
>UniRef100_A9PJF4 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
           Populus deltoides RepID=A9PJF4_9ROSI
          Length = 461

 Score =  146 bits (368), Expect = 9e-34
 Identities = 81/161 (50%), Positives = 103/161 (63%), Gaps = 10/161 (6%)
 Frame = +2

Query: 56  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVASS-----RKQMGRWRSIDAGVDASDD 211
           T+ +SA  G   ++V  +R     +     +VVA       + +  RW  +    D SDD
Sbjct: 26  TVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVT--DMSDD 83

Query: 212 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDK 385
           QQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DG+YI+PAF+DK
Sbjct: 84  QQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGYYIAPAFMDK 142

Query: 386 MTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           + +HI+KNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 143 IVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK 183

[17][TOP]
>UniRef100_A9PJ06 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
           Populus deltoides RepID=A9PJ06_9ROSI
          Length = 476

 Score =  146 bits (368), Expect = 9e-34
 Identities = 81/158 (51%), Positives = 102/158 (64%), Gaps = 7/158 (4%)
 Frame = +2

Query: 56  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVAS--SRKQMGRWRSIDAGVDASDDQQD 220
           T+ +SA  G   ++V  +R     +     +VVA    +KQ  + R      D SDDQQD
Sbjct: 26  TVPNSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEYDEKKQTDKDRWGGLVTDMSDDQQD 85

Query: 221 ITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTI 394
           ITRG+ MVD LFQ   G G THN +LSS EYLSQ   ++N  N  DG+YI+PAF+DK+ +
Sbjct: 86  ITRGKGMVDSLFQAPQGTG-THNPILSSYEYLSQGLRTYNLDNNMDGYYIAPAFMDKLVV 144

Query: 395 HIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           HI+KNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 145 HISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK 182

[18][TOP]
>UniRef100_Q40565 Ribulose bisphosphate carboxylase/oxygenase activase 2,
           chloroplastic n=1 Tax=Nicotiana tabacum RepID=RCA2_TOBAC
          Length = 439

 Score =  145 bits (366), Expect = 2e-33
 Identities = 78/149 (52%), Positives = 99/149 (66%), Gaps = 4/149 (2%)
 Frame = +2

Query: 74  VSGQRVGGARVATRSVRRAQLQVVASSRKQM--GRWRSIDAGVDASDDQQDITRGREMVD 247
           V G+ V   +V  RS+R A  +  A  +KQ    RW+ +    D SDDQQDI RG+ MVD
Sbjct: 40  VYGKGVSSPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQ--DFSDDQQDIARGKGMVD 97

Query: 248 DLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDL 421
            LFQ   G G TH+AVL S EY+SQ    +N  N  DGFYI+P+F+DK+ +HI KNF+ L
Sbjct: 98  SLFQAPTGTG-THHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKL 156

Query: 422 PKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           P IKVPLILG+WGGKGQ K+ QC L ++K
Sbjct: 157 PNIKVPLILGVWGGKGQGKSFQCELVFRK 185

[19][TOP]
>UniRef100_C5Y1T6 Putative uncharacterized protein Sb05g027880 n=1 Tax=Sorghum
           bicolor RepID=C5Y1T6_SORBI
          Length = 473

 Score =  144 bits (364), Expect = 3e-33
 Identities = 83/172 (48%), Positives = 107/172 (62%), Gaps = 4/172 (2%)
 Frame = +2

Query: 5   STTFRPFIQSALRTMQ-VTMKSSAVSGQRVGGAR--VATRSVRRAQLQVVASSRK-QMGR 172
           ST    F+ S     Q +T+ S     Q   G R  +  R++     Q V  +++ +  R
Sbjct: 19  STAANSFLGSNNNNKQKLTVSSIRKKKQHQQGGRGLIIIRAMAAVNKQEVDETKQTEQDR 78

Query: 173 WRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIED 352
           WR +    D SDDQQDITRG+ M+D LFQ   G  GTH AVLSS +Y+SQ    +N + D
Sbjct: 79  WRGL--AYDTSDDQQDITRGKGMIDSLFQAPMG-DGTHVAVLSSYDYISQGLRQYNTM-D 134

Query: 353 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           G+YI+PAF+DK+ +HIAKNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 135 GYYIAPAFMDKLVLHIAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAK 186

[20][TOP]
>UniRef100_Q9M4V3 Ribulose bisphosphate carboxylase activase B n=1 Tax=Triticum
           aestivum RepID=Q9M4V3_WHEAT
          Length = 432

 Score =  144 bits (362), Expect = 4e-33
 Identities = 75/143 (52%), Positives = 96/143 (67%), Gaps = 4/143 (2%)
 Frame = +2

Query: 92  GGARVATRSVRR--AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGG 265
           GG ++  R VR   A+ ++    +    RW+ +    D SDDQQDITRG+ +VD LFQ  
Sbjct: 36  GGNKINNRVVRAMAAKKELDEGKQTDADRWKGL--AYDISDDQQDITRGKGIVDSLFQAP 93

Query: 266 FGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVP 439
            G  GTH A+LSS EY+SQ   +  F+N  DG YI+PAF+DK+ +H+AKNFM LP IKVP
Sbjct: 94  MG-DGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVP 152

Query: 440 LILGIWGGKGQDKNLQCALAYKK 508
           LILGIWGGKGQ K+ QC L + K
Sbjct: 153 LILGIWGGKGQGKSFQCELVFAK 175

[21][TOP]
>UniRef100_Q9ATB9 Rubisco activase (Fragment) n=1 Tax=Zantedeschia aethiopica
           RepID=Q9ATB9_ZANAE
          Length = 435

 Score =  144 bits (362), Expect = 4e-33
 Identities = 79/170 (46%), Positives = 105/170 (61%), Gaps = 2/170 (1%)
 Frame = +2

Query: 5   STTFRPFIQSALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSI 184
           S T   F+ ++L+T+  ++          G  R +T +++     +  S + +  RW  +
Sbjct: 23  SVTRSGFLGTSLKTVNPSL----------GHGRTSTGTLKVMAADLDESKQTKTDRWAGL 72

Query: 185 DAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGF 358
               D SDDQQDITRG+ MVD LFQ   G  GTHN VLSS EY+S    SFN  N  +G 
Sbjct: 73  YT--DTSDDQQDITRGKGMVDSLFQAPMG-DGTHNPVLSSYEYISTGLRSFNLDNTVNGL 129

Query: 359 YISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           YI+PAF+DK+ +HI KNFM+LP IK+PLILGIWGGKGQ K+ QC L + K
Sbjct: 130 YIAPAFMDKLVVHITKNFMNLPNIKIPLILGIWGGKGQGKSFQCELVFAK 179

[22][TOP]
>UniRef100_Q42450 Ribulose bisphosphate carboxylase/oxygenase activase B,
           chloroplastic n=1 Tax=Hordeum vulgare RepID=RCAB_HORVU
          Length = 425

 Score =  144 bits (362), Expect = 4e-33
 Identities = 75/143 (52%), Positives = 97/143 (67%), Gaps = 4/143 (2%)
 Frame = +2

Query: 92  GGARVATRSVR--RAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGG 265
           GG ++ +R VR   A+ ++    +    RW+ +    D SDDQQDITRG+ +VD LFQ  
Sbjct: 30  GGNKMKSRVVRVMAAKKELDQGKQTDADRWKGL--AYDISDDQQDITRGKGIVDSLFQAP 87

Query: 266 FGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVP 439
            G  GTH A+LSS EY+SQ   +  F+N  DG YI+PAF+DK+ +H+AKNFM LP IKVP
Sbjct: 88  MG-DGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVP 146

Query: 440 LILGIWGGKGQDKNLQCALAYKK 508
           LILGIWGGKGQ K+ QC L + K
Sbjct: 147 LILGIWGGKGQGKSFQCELVFAK 169

[23][TOP]
>UniRef100_Q9ATC2 Rubisco activase (Fragment) n=2 Tax=Zantedeschia aethiopica
           RepID=Q9ATC2_ZANAE
          Length = 436

 Score =  143 bits (360), Expect = 8e-33
 Identities = 74/142 (52%), Positives = 94/142 (66%), Gaps = 2/142 (1%)
 Frame = +2

Query: 89  VGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGF 268
           +G  R +T +++     +  S + +  RW  +    D SDDQQDITRG+ MVD LFQ   
Sbjct: 5   LGHGRTSTGTLKVMAADLDESKQTKTDRWAGLYT--DTSDDQQDITRGKGMVDSLFQAPM 62

Query: 269 GAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPL 442
           G  GTHN VLSS EY+S    SFN  N  +G YI+PAF+DK+ +HI KNFM+LP IK+PL
Sbjct: 63  G-DGTHNPVLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLPNIKIPL 121

Query: 443 ILGIWGGKGQDKNLQCALAYKK 508
           ILGIWGGKGQ K+ QC L + K
Sbjct: 122 ILGIWGGKGQGKSFQCELVFAK 143

[24][TOP]
>UniRef100_C5Y1T5 Putative uncharacterized protein Sb05g027870 n=1 Tax=Sorghum
           bicolor RepID=C5Y1T5_SORBI
          Length = 440

 Score =  143 bits (360), Expect = 8e-33
 Identities = 80/168 (47%), Positives = 107/168 (63%), Gaps = 6/168 (3%)
 Frame = +2

Query: 23  FIQSALRTMQVTMKSSAVSGQRVGGARVATRSVRR----AQLQVVASSRKQMGRWRSIDA 190
           F+   L   QV+  ++AV+      +  A  +V R    A  +V  + +    RW+ +  
Sbjct: 21  FLGKKLSKQQVSA-AAAVNYYHGKSSSSAAANVNRFKVMAAKEVDETKQSDQDRWKGL-- 77

Query: 191 GVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRA--SFNNIEDGFYI 364
             D SDDQQDITRG+ M+D LFQ   G  GTH AVLSS +Y+SQ +   SF+N+ DGFYI
Sbjct: 78  AYDVSDDQQDITRGKGMIDSLFQAPMG-DGTHVAVLSSYDYISQGQKTYSFDNMMDGFYI 136

Query: 365 SPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           S +F+DK+ +H++KNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 137 SKSFMDKLVVHLSKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFSK 184

[25][TOP]
>UniRef100_Q9AXG0 Ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2
           (Fragment) n=1 Tax=Gossypium hirsutum RepID=Q9AXG0_GOSHI
          Length = 435

 Score =  142 bits (359), Expect = 1e-32
 Identities = 72/132 (54%), Positives = 92/132 (69%), Gaps = 2/132 (1%)
 Frame = +2

Query: 119 VRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVL 298
           V  A+ ++   ++ +  RW+ +    D SDDQQDITRG+ MVD LFQ      GTH AV+
Sbjct: 14  VMAAEKEIDEETQTEKDRWKGL--AYDISDDQQDITRGKGMVDSLFQAPMN-DGTHYAVM 70

Query: 299 SSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQ 472
           SS EY+SQ   ++N  N  DGFYI+PAF+DK+ +HI+KNFM LP IKVPLILGIWGGKGQ
Sbjct: 71  SSYEYISQGLKTYNLDNNMDGFYIAPAFMDKLVVHISKNFMSLPNIKVPLILGIWGGKGQ 130

Query: 473 DKNLQCALAYKK 508
            K+ QC L + K
Sbjct: 131 GKSFQCELVFAK 142

[26][TOP]
>UniRef100_C5J0I3 Chloroplast rubisco activase n=1 Tax=Cucumis sativus
           RepID=C5J0I3_CUCSA
          Length = 611

 Score =  142 bits (359), Expect = 1e-32
 Identities = 77/155 (49%), Positives = 100/155 (64%), Gaps = 7/155 (4%)
 Frame = +2

Query: 65  SSAVSGQRVG-GARVATRSVRRAQLQVVASS----RKQMGRWRSIDAGVDASDDQQDITR 229
           +SA  G R+   +R  T  +     ++VA      + +  +WR +    D SDDQQDITR
Sbjct: 27  NSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGL--AFDTSDDQQDITR 84

Query: 230 GREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRA--SFNNIEDGFYISPAFLDKMTIHIA 403
           G+ + D LFQ   G G THNAVLSS EY+S      S++N  DGFYI+PAF+DK+T+HI 
Sbjct: 85  GKGLADPLFQAPMGTG-THNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIV 143

Query: 404 KNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           KNF+ LP IKVPLILG+WGGKGQ K+ QC L + K
Sbjct: 144 KNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAK 178

[27][TOP]
>UniRef100_Q01587 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Cucumis sativus RepID=RCA_CUCSA
          Length = 413

 Score =  142 bits (359), Expect = 1e-32
 Identities = 77/155 (49%), Positives = 100/155 (64%), Gaps = 7/155 (4%)
 Frame = +2

Query: 65  SSAVSGQRVG-GARVATRSVRRAQLQVVASS----RKQMGRWRSIDAGVDASDDQQDITR 229
           +SA  G R+   +R  T  +     ++VA      + +  +WR +    D SDDQQDITR
Sbjct: 27  NSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGL--AFDTSDDQQDITR 84

Query: 230 GREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRA--SFNNIEDGFYISPAFLDKMTIHIA 403
           G+ + D LFQ   G G THNAVLSS EY+S      S++N  DGFYI+PAF+DK+T+HI 
Sbjct: 85  GKGLADPLFQAPMGTG-THNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIV 143

Query: 404 KNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           KNF+ LP IKVPLILG+WGGKGQ K+ QC L + K
Sbjct: 144 KNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAK 178

[28][TOP]
>UniRef100_Q308Y6 Ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2
           n=1 Tax=Gossypium hirsutum RepID=Q308Y6_GOSHI
          Length = 421

 Score =  142 bits (358), Expect = 1e-32
 Identities = 72/129 (55%), Positives = 90/129 (69%), Gaps = 2/129 (1%)
 Frame = +2

Query: 128 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 307
           A+ ++   ++ +  RW+ +    D SDDQQDITRG+ MVD LFQ      GTH AV+SS 
Sbjct: 3   AEKEIDEETQTEKDRWKGL--AYDISDDQQDITRGKGMVDSLFQAPMN-DGTHYAVMSSY 59

Query: 308 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKN 481
           EYLSQ   ++N  N  DGFYI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQ K+
Sbjct: 60  EYLSQGLKTYNLDNNMDGFYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKS 119

Query: 482 LQCALAYKK 508
            QC L + K
Sbjct: 120 FQCELVFAK 128

[29][TOP]
>UniRef100_Q941B7 At2g39730/T5I7.3 n=1 Tax=Arabidopsis thaliana RepID=Q941B7_ARATH
          Length = 474

 Score =  142 bits (357), Expect = 2e-32
 Identities = 71/115 (61%), Positives = 84/115 (73%), Gaps = 2/115 (1%)
 Frame = +2

Query: 170 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 343
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 344 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           + DGFYI+PAF+DK+ +HI KNF+ LP IKVPLILGIWGGKGQ K+ QC L   K
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAK 181

[30][TOP]
>UniRef100_Q8H172 At2g39730/T5I7.3 n=1 Tax=Arabidopsis thaliana RepID=Q8H172_ARATH
          Length = 474

 Score =  142 bits (357), Expect = 2e-32
 Identities = 71/115 (61%), Positives = 84/115 (73%), Gaps = 2/115 (1%)
 Frame = +2

Query: 170 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 343
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 344 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           + DGFYI+PAF+DK+ +HI KNF+ LP IKVPLILGIWGGKGQ K+ QC L   K
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAK 181

[31][TOP]
>UniRef100_Q3EBJ5 Putative uncharacterized protein At2g39730.3 n=1 Tax=Arabidopsis
           thaliana RepID=Q3EBJ5_ARATH
          Length = 441

 Score =  142 bits (357), Expect = 2e-32
 Identities = 71/115 (61%), Positives = 84/115 (73%), Gaps = 2/115 (1%)
 Frame = +2

Query: 170 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 343
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 344 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           + DGFYI+PAF+DK+ +HI KNF+ LP IKVPLILGIWGGKGQ K+ QC L   K
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAK 181

[32][TOP]
>UniRef100_A9UHW7 Rubisco activase n=1 Tax=Ipomoea batatas RepID=A9UHW7_IPOBA
          Length = 439

 Score =  142 bits (357), Expect = 2e-32
 Identities = 71/129 (55%), Positives = 93/129 (72%), Gaps = 2/129 (1%)
 Frame = +2

Query: 128 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 307
           AQ ++  S +    RW+ +    D SDDQQDITRG+ +VD LFQ   G G TH+AVLSS 
Sbjct: 57  AQPEIDESKQTHEDRWKGLVE--DISDDQQDITRGKGLVDTLFQAPMGTG-THHAVLSSY 113

Query: 308 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKN 481
           EY+SQ + +++  N  DGFYI+PAF+DK+ +HI KNF+ LP IK+PLILGIWGGKGQ K+
Sbjct: 114 EYVSQGQKTYSLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKIPLILGIWGGKGQGKS 173

Query: 482 LQCALAYKK 508
            QC L ++K
Sbjct: 174 FQCELVFRK 182

[33][TOP]
>UniRef100_P10896-2 Isoform Short of Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic n=1 Tax=Arabidopsis thaliana
           RepID=P10896-2
          Length = 446

 Score =  142 bits (357), Expect = 2e-32
 Identities = 71/115 (61%), Positives = 84/115 (73%), Gaps = 2/115 (1%)
 Frame = +2

Query: 170 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 343
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 344 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           + DGFYI+PAF+DK+ +HI KNF+ LP IKVPLILGIWGGKGQ K+ QC L   K
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAK 181

[34][TOP]
>UniRef100_P10896 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Arabidopsis thaliana RepID=RCA_ARATH
          Length = 474

 Score =  142 bits (357), Expect = 2e-32
 Identities = 71/115 (61%), Positives = 84/115 (73%), Gaps = 2/115 (1%)
 Frame = +2

Query: 170 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 343
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 344 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           + DGFYI+PAF+DK+ +HI KNF+ LP IKVPLILGIWGGKGQ K+ QC L   K
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAK 181

[35][TOP]
>UniRef100_C0P5X6 Putative uncharacterized protein n=1 Tax=Zea mays
           RepID=C0P5X6_MAIZE
          Length = 463

 Score =  140 bits (354), Expect = 4e-32
 Identities = 75/136 (55%), Positives = 93/136 (68%), Gaps = 2/136 (1%)
 Frame = +2

Query: 107 ATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTH 286
           AT ++R   + V  +   +  RWR +   +D SDDQQDITRG+  VD LFQ   G  GTH
Sbjct: 45  ATTTIRVRAMAV--NKETEQDRWRGL--ALDTSDDQQDITRGKGRVDPLFQAPMG-DGTH 99

Query: 287 NAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWG 460
            AVLSS +Y+SQ     S +N+ DG+YI+PAF+DK+ +HIAKNFM LP IKVPLILGIWG
Sbjct: 100 VAVLSSYDYISQGLRHYSLDNMMDGYYIAPAFMDKLVVHIAKNFMPLPNIKVPLILGIWG 159

Query: 461 GKGQDKNLQCALAYKK 508
           GKGQ K+ QC L   K
Sbjct: 160 GKGQGKSFQCELVLAK 175

[36][TOP]
>UniRef100_A9PG25 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=A9PG25_POPTR
          Length = 361

 Score =  140 bits (354), Expect = 4e-32
 Identities = 70/104 (67%), Positives = 81/104 (77%), Gaps = 2/104 (1%)
 Frame = +2

Query: 203 SDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAF 376
           SDDQQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DGFYI+PAF
Sbjct: 2   SDDQQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGFYIAPAF 60

Query: 377 LDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           +DK+ +HI+KNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 61  MDKIVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCELVFAK 104

[37][TOP]
>UniRef100_A8W9B0 Chloroplast ribulose 1,5-bisphosphate carboxylase/oxygenase
           activase n=1 Tax=Flaveria bidentis RepID=A8W9B0_FLABI
          Length = 438

 Score =  140 bits (354), Expect = 4e-32
 Identities = 74/152 (48%), Positives = 97/152 (63%), Gaps = 1/152 (0%)
 Frame = +2

Query: 56  TMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGR 235
           ++K    S   V   + +T  +  A+ ++  + +    RWR +    D SDDQQDITRG+
Sbjct: 31  SLKKIVNSRHAVNNNKFSTFKIFAAEKEIEETKQTDKDRWRGL--AYDMSDDQQDITRGK 88

Query: 236 EMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTIHIAKNF 412
            MVD LFQ    +G TH AV+SS EY+S   R   +N  DGFYI+PAF+DK+ +HI KNF
Sbjct: 89  GMVDSLFQAPQDSG-THFAVMSSYEYISTGLRTYLDNNMDGFYIAPAFMDKLVVHITKNF 147

Query: 413 MDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           M LP IKVPLILG+WGGKGQ K+ QC L + K
Sbjct: 148 MTLPNIKVPLILGVWGGKGQGKSFQCELVFAK 179

[38][TOP]
>UniRef100_B9T427 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplast, putative n=1 Tax=Ricinus communis
           RepID=B9T427_RICCO
          Length = 474

 Score =  139 bits (350), Expect = 1e-31
 Identities = 74/141 (52%), Positives = 94/141 (66%), Gaps = 4/141 (2%)
 Frame = +2

Query: 98  ARVATRSVRRAQLQVVAS--SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFG 271
           +++  + +    L+V A    +KQ  + R      D SDDQQDITRG+ MVD LFQ   G
Sbjct: 42  SKIIHQKILSGNLKVSAEYDEQKQTDKDRWGGLAYDISDDQQDITRGKGMVDSLFQAPMG 101

Query: 272 AGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLI 445
            G TH AV+SS +YLSQ    +N  N  DGFYI+PAF+DK+ +HI KNF++LP IKVPLI
Sbjct: 102 TG-THYAVMSSYDYLSQGLRQYNLDNNMDGFYIAPAFMDKVVVHITKNFLNLPNIKVPLI 160

Query: 446 LGIWGGKGQDKNLQCALAYKK 508
           LGIWGGKGQ K+ QC L + K
Sbjct: 161 LGIWGGKGQGKSFQCELVFAK 181

[39][TOP]
>UniRef100_B9HT80 Predicted protein (Fragment) n=2 Tax=Populus trichocarpa
           RepID=B9HT80_POPTR
          Length = 424

 Score =  139 bits (349), Expect = 1e-31
 Identities = 71/120 (59%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
 Frame = +2

Query: 155 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS 334
           +KQ  + R      D SDDQQDI+RG+ MVD LFQ   G G THN VL+S EYLSQ   +
Sbjct: 14  KKQTDKDRWGGLVTDMSDDQQDISRGKGMVDSLFQAPQGTG-THNPVLNSYEYLSQGLRT 72

Query: 335 FN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           +N  N  DGFYI+PAF+DK+ +HI+KNFM LP IKVPLILG+WGGKGQ K+ QC L + K
Sbjct: 73  YNLDNNMDGFYIAPAFMDKLVVHISKNFMSLPNIKVPLILGVWGGKGQGKSFQCELVFAK 132

[40][TOP]
>UniRef100_Q9ZT00 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=3 Tax=Zea mays RepID=RCA_MAIZE
          Length = 433

 Score =  139 bits (349), Expect = 1e-31
 Identities = 70/129 (54%), Positives = 91/129 (70%), Gaps = 2/129 (1%)
 Frame = +2

Query: 128 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 307
           A  +V  + +    RW+ +    D SDDQQDITRG+ +VD+LFQ   G  GTH AVLSS 
Sbjct: 52  AAKEVDETKQTDEDRWKGL--AYDISDDQQDITRGKGLVDNLFQAPMG-DGTHVAVLSSY 108

Query: 308 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKN 481
           +Y+SQ + S+N  N+ DGFYI+  F+DK+ +H++KNFM LP IKVPLILGIWGGKGQ K+
Sbjct: 109 DYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKS 168

Query: 482 LQCALAYKK 508
            QC L + K
Sbjct: 169 FQCELVFAK 177

[41][TOP]
>UniRef100_C6T859 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6T859_SOYBN
          Length = 443

 Score =  138 bits (348), Expect = 2e-31
 Identities = 81/161 (50%), Positives = 100/161 (62%), Gaps = 13/161 (8%)
 Frame = +2

Query: 65  SSAVSG---QRVGGARVATRSVRRAQLQVVASSRKQ---------MGRWRSIDAGVDASD 208
           SSA  G   ++V  +RV    V     ++VA   K+           RW+ +    D SD
Sbjct: 29  SSAFFGTSLKKVIASRVPNSKVSGGSFKIVAVEEKKEIEETQQTDKDRWKGL--AYDISD 86

Query: 209 DQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDK 385
           DQQDITRG+ +VD LFQ    AG TH AV+SS EYLS   R   +N  DGFYI+PAF+DK
Sbjct: 87  DQQDITRGKGLVDSLFQAPQDAG-THYAVMSSYEYLSTGLRQYLDNKMDGFYIAPAFMDK 145

Query: 386 MTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           + +HI+KNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 146 LVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAK 186

[42][TOP]
>UniRef100_B7EAB2 cDNA clone:J013001C24, full insert sequence n=2 Tax=Oryza sativa
           Japonica Group RepID=B7EAB2_ORYSJ
          Length = 433

 Score =  138 bits (348), Expect = 2e-31
 Identities = 71/115 (61%), Positives = 83/115 (72%), Gaps = 2/115 (1%)
 Frame = +2

Query: 170 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 343
           RW+ +    D SDDQQDITRG+  VD LFQ   G  GTH AVLSS EYLSQ   +  F+N
Sbjct: 61  RWKGL--AYDISDDQQDITRGKGFVDSLFQAPTG-DGTHEAVLSSYEYLSQGLRTYDFDN 117

Query: 344 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
              GFYI+PAF+DK+ +HI+KNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 118 TMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAK 172

[43][TOP]
>UniRef100_A9TBP0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TBP0_PHYPA
          Length = 445

 Score =  138 bits (348), Expect = 2e-31
 Identities = 77/157 (49%), Positives = 103/157 (65%), Gaps = 6/157 (3%)
 Frame = +2

Query: 56  TMKSSAVSGQRVGGARVATRSVRRAQLQVVASS----RKQMGRWRSIDAGVDASDDQQDI 223
           T+ +SA  G +   +   T  V + + +VV  +    +K++ RW  +  G D SDDQQDI
Sbjct: 28  TLPNSAFLGCKSKVSANVTLGVAKGKSRVVCEAEGEKKKKVDRWAGL--GNDISDDQQDI 85

Query: 224 TRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIH 397
            RG+ MVD LFQG  G G T    +SS +Y+S  + ++N  N++DG YI+PAF+DK+ IH
Sbjct: 86  QRGKGMVDALFQGAVGLG-TQVVTMSSWDYVSTGQRTYNFDNMKDGLYIAPAFMDKLIIH 144

Query: 398 IAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           IAKNFM+LP IKVPLILGIWGGKGQ K+ QC L   K
Sbjct: 145 IAKNFMNLPGIKVPLILGIWGGKGQGKSFQCELVMAK 181

[44][TOP]
>UniRef100_A7NYV5 Chromosome chr6 scaffold_3, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7NYV5_VITVI
          Length = 472

 Score =  138 bits (348), Expect = 2e-31
 Identities = 70/126 (55%), Positives = 87/126 (69%), Gaps = 2/126 (1%)
 Frame = +2

Query: 137 QVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYL 316
           ++  + + +  RW+ +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS EYL
Sbjct: 59  EIDENEQTEKDRWKGL--AYDVSDDQQDITRGKGMVDSLFQAPMQSG-THYAVMSSYEYL 115

Query: 317 SQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQC 490
           S     +N  N  DGFYI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQ K+ QC
Sbjct: 116 STGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQC 175

Query: 491 ALAYKK 508
            L + K
Sbjct: 176 ELVFSK 181

[45][TOP]
>UniRef100_A5C3D4 Putative uncharacterized protein n=1 Tax=Vitis vinifera
           RepID=A5C3D4_VITVI
          Length = 472

 Score =  138 bits (348), Expect = 2e-31
 Identities = 70/126 (55%), Positives = 87/126 (69%), Gaps = 2/126 (1%)
 Frame = +2

Query: 137 QVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYL 316
           ++  + + +  RW+ +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS EYL
Sbjct: 59  EIDENEQTEKDRWKGL--AYDVSDDQQDITRGKGMVDSLFQAPMQSG-THYAVMSSYEYL 115

Query: 317 SQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQC 490
           S     +N  N  DGFYI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQ K+ QC
Sbjct: 116 STGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQC 175

Query: 491 ALAYKK 508
            L + K
Sbjct: 176 ELVFSK 181

[46][TOP]
>UniRef100_P93431 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=2 Tax=Oryza sativa RepID=RCA_ORYSJ
          Length = 466

 Score =  138 bits (348), Expect = 2e-31
 Identities = 71/115 (61%), Positives = 83/115 (72%), Gaps = 2/115 (1%)
 Frame = +2

Query: 170 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 343
           RW+ +    D SDDQQDITRG+  VD LFQ   G  GTH AVLSS EYLSQ   +  F+N
Sbjct: 61  RWKGL--AYDISDDQQDITRGKGFVDSLFQAPTG-DGTHEAVLSSYEYLSQGLRTYDFDN 117

Query: 344 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
              GFYI+PAF+DK+ +HI+KNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 118 TMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAK 172

[47][TOP]
>UniRef100_Q06B50 Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase large protein isoform n=2 Tax=Acer rubrum
           RepID=Q06B50_ACERU
          Length = 474

 Score =  137 bits (346), Expect = 3e-31
 Identities = 76/158 (48%), Positives = 98/158 (62%), Gaps = 7/158 (4%)
 Frame = +2

Query: 56  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVA----SSRKQMGRWRSIDAGVDASDDQQ 217
           T+ +SA  G  +    +R     V     +VVA    + + +  +WR +    D SDDQQ
Sbjct: 27  TVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGL--AYDTSDDQQ 84

Query: 218 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTI 394
           DITRG+ +VD LFQ   G G TH AV+SS +Y+S   R    N  DGFYI+PAF+DK+ +
Sbjct: 85  DITRGKGLVDSLFQAPSGTG-THYAVMSSYDYISTGLRTYLENSMDGFYIAPAFMDKLVV 143

Query: 395 HIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           HI KNFM LP IK+PLILGIWGGKGQ K+ QC L + K
Sbjct: 144 HITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAK 181

[48][TOP]
>UniRef100_A9TBN9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TBN9_PHYPA
          Length = 455

 Score =  137 bits (345), Expect = 4e-31
 Identities = 78/164 (47%), Positives = 105/164 (64%), Gaps = 5/164 (3%)
 Frame = +2

Query: 32  SALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASS---RKQMGRWRSIDAGVDA 202
           SA  T + T+ SSA+ G     +   T  V + + +VV  +   +K++ RW  +  G D 
Sbjct: 21  SAQATSKSTLPSSALFGCSSKVSVNVTLGVAKGKSRVVCEAEGEKKKVDRWAGL--GNDI 78

Query: 203 SDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAF 376
           SDDQQDI RG+ MVD LFQG  G G T    +SS +Y+S ++ ++N  N  DG YI+PAF
Sbjct: 79  SDDQQDIQRGKGMVDALFQGATGLG-TQVVTMSSWDYVSTAQRTYNFDNTSDGLYIAPAF 137

Query: 377 LDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           +DK+ IH+ KNFM+LP IKVPLILG+WGGKGQ K+ Q  L  KK
Sbjct: 138 MDKLVIHVCKNFMNLPGIKVPLILGVWGGKGQGKSFQSELVMKK 181

[49][TOP]
>UniRef100_Q7X9A2 Rubisco activase alpha form n=1 Tax=Deschampsia antarctica
           RepID=Q7X9A2_DESAN
          Length = 465

 Score =  137 bits (344), Expect = 5e-31
 Identities = 67/115 (58%), Positives = 84/115 (73%), Gaps = 2/115 (1%)
 Frame = +2

Query: 170 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--RASFNN 343
           +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +  F+N
Sbjct: 61  KWKGL--AYDISDDQQDITRGKGIVDSLFQAPMG-DGTHEAVLSSYEYVSQGLKKYDFDN 117

Query: 344 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
              GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQ K+ QC L + K
Sbjct: 118 TMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAK 172

[50][TOP]
>UniRef100_Q7X9A1 Rubisco activase beta form n=1 Tax=Deschampsia antarctica
           RepID=Q7X9A1_DESAN
          Length = 428

 Score =  137 bits (344), Expect = 5e-31
 Identities = 67/115 (58%), Positives = 84/115 (73%), Gaps = 2/115 (1%)
 Frame = +2

Query: 170 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--RASFNN 343
           +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +  F+N
Sbjct: 61  KWKGL--AYDISDDQQDITRGKGIVDSLFQAPMG-DGTHEAVLSSYEYVSQGLKKYDFDN 117

Query: 344 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
              GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQ K+ QC L + K
Sbjct: 118 TMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAK 172

[51][TOP]
>UniRef100_C1K241 Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase n=1 Tax=Solenostemon scutellarioides
           RepID=C1K241_SOLSC
          Length = 436

 Score =  137 bits (344), Expect = 5e-31
 Identities = 68/135 (50%), Positives = 95/135 (70%), Gaps = 5/135 (3%)
 Frame = +2

Query: 119 VRRAQLQVVASSRKQM--GRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNA 292
           V     +VVA ++K     RW  +    D SDDQQDI RG+ MVD LFQ   G G TH+A
Sbjct: 48  VSSGSFKVVAEAKKPSPGDRWGGLIE--DVSDDQQDIVRGKGMVDSLFQAPSGMG-THDA 104

Query: 293 VLSSQEYLSQSRASFNNIE---DGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGG 463
           +++S EY+SQ + ++++++   DG YI+PAF+DK+ +H++KNFM LP IKVPLILG+WGG
Sbjct: 105 IMNSYEYISQGQKTYDHLDNTLDGLYIAPAFMDKLVVHLSKNFMTLPNIKVPLILGVWGG 164

Query: 464 KGQDKNLQCALAYKK 508
           KGQ K+ QC L ++K
Sbjct: 165 KGQGKSFQCELVFRK 179

[52][TOP]
>UniRef100_Q05C31 Putative uncharacterized protein n=1 Tax=Homo sapiens
           RepID=Q05C31_HUMAN
          Length = 427

 Score =  137 bits (344), Expect = 5e-31
 Identities = 67/120 (55%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
 Frame = +2

Query: 155 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 328
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +
Sbjct: 55  KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLKK 111

Query: 329 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
             F+N   GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQ K+ QC L + K
Sbjct: 112 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAK 171

[53][TOP]
>UniRef100_Q40281 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Malus x domestica RepID=RCA_MALDO
          Length = 437

 Score =  137 bits (344), Expect = 5e-31
 Identities = 72/143 (50%), Positives = 94/143 (65%), Gaps = 6/143 (4%)
 Frame = +2

Query: 98  ARVATRSVRRAQLQVVAS----SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGG 265
           +R     V    L++VAS     +    RW+ +    D SDDQQDITRG+  VD LFQ  
Sbjct: 42  SRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGL--AFDTSDDQQDITRGKGKVDSLFQAP 99

Query: 266 FGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVP 439
            G+G TH A++SS EY+S    + +F+N  DG+YI+PAF+DK+ +HI KNFM LP +KVP
Sbjct: 100 QGSG-THFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVP 158

Query: 440 LILGIWGGKGQDKNLQCALAYKK 508
           LILGIWGGKGQ K+ QC L + K
Sbjct: 159 LILGIWGGKGQGKSFQCELVFAK 181

[54][TOP]
>UniRef100_Q9AXG1 Ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 n=1
           Tax=Gossypium hirsutum RepID=Q9AXG1_GOSHI
          Length = 438

 Score =  136 bits (343), Expect = 7e-31
 Identities = 69/129 (53%), Positives = 88/129 (68%), Gaps = 2/129 (1%)
 Frame = +2

Query: 128 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 307
           A  ++   ++    RW+ +    D SDDQQDITRG+ MVD LFQ      GTH AV+SS 
Sbjct: 59  AAKEIDEDTQTDQDRWKGL--AYDISDDQQDITRGKGMVDSLFQAPMN-DGTHYAVMSSY 115

Query: 308 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKN 481
           EY+SQ   +++  N  DGFYI+PAF+DK+ +HI KN+M LP IKVPLILGIWGGKGQ K+
Sbjct: 116 EYISQGLRTYDLDNNMDGFYIAPAFMDKLVVHITKNYMTLPNIKVPLILGIWGGKGQGKS 175

Query: 482 LQCALAYKK 508
            QC L + K
Sbjct: 176 FQCELVFAK 184

[55][TOP]
>UniRef100_Q40073 Ribulose bisphosphate carboxylase/oxygenase activase A,
           chloroplastic n=2 Tax=Hordeum vulgare RepID=RCAA_HORVU
          Length = 464

 Score =  136 bits (343), Expect = 7e-31
 Identities = 67/120 (55%), Positives = 86/120 (71%), Gaps = 2/120 (1%)
 Frame = +2

Query: 155 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 328
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G G TH AVLSS EY+SQ   +
Sbjct: 55  KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTGHG-THEAVLSSYEYVSQGLRK 111

Query: 329 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
             F+N   GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQ K+ QC L + K
Sbjct: 112 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAK 171

[56][TOP]
>UniRef100_A7PIQ8 Chromosome chr13 scaffold_17, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7PIQ8_VITVI
          Length = 438

 Score =  136 bits (342), Expect = 9e-31
 Identities = 78/159 (49%), Positives = 96/159 (60%), Gaps = 8/159 (5%)
 Frame = +2

Query: 56  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVASSRKQM----GRWRSIDAGVDASDDQQ 217
           ++ SSA  G  +    +R     V     +VVA     M     +W+ +    D SDDQQ
Sbjct: 27  SVPSSAFLGSSLKKVNSRFTHSKVSSGSFKVVAEVDDDMQTEKDKWKGL--AFDTSDDQQ 84

Query: 218 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMT 391
           DI RG+ MVD LFQ    AG TH AV+SS EY+S     +N  N  DGFYI+PAF+DK+ 
Sbjct: 85  DIVRGKGMVDSLFQAPMDAG-THYAVMSSYEYISTGLRQYNLDNNMDGFYIAPAFMDKLV 143

Query: 392 IHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           +HI KNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 144 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFSK 182

[57][TOP]
>UniRef100_O82428 Rubisco activase n=1 Tax=Datisca glomerata RepID=O82428_DATGL
          Length = 373

 Score =  135 bits (341), Expect = 1e-30
 Identities = 74/140 (52%), Positives = 89/140 (63%), Gaps = 3/140 (2%)
 Frame = +2

Query: 98  ARVATRSVRRAQLQVVASS--RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFG 271
           +R+    +    ++ VA     KQ  + R      D SDDQQDITRG+ MVD LFQ    
Sbjct: 43  SRLTNPRIAAGNIKAVADDDEEKQTSKDRWGGLAFDTSDDQQDITRGKGMVDSLFQAPMQ 102

Query: 272 AGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLIL 448
            G TH AV+SS EYLS   R   +N  DGFYI+PAF+DK+ +HI KNFM LP IKVPLIL
Sbjct: 103 TG-THYAVMSSYEYLSTGLRQYLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLIL 161

Query: 449 GIWGGKGQDKNLQCALAYKK 508
           GIWGGKGQ K+ QC L + K
Sbjct: 162 GIWGGKGQGKSFQCELVFAK 181

[58][TOP]
>UniRef100_B9SDY7 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplast, putative n=1 Tax=Ricinus communis
           RepID=B9SDY7_RICCO
          Length = 473

 Score =  135 bits (340), Expect = 2e-30
 Identities = 70/115 (60%), Positives = 81/115 (70%), Gaps = 2/115 (1%)
 Frame = +2

Query: 170 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 343
           RW  +    D SDDQQDITRG+ MVD LFQ    AG TH AV+SS EYLS     +N  N
Sbjct: 69  RWGGL--AYDMSDDQQDITRGKGMVDSLFQAPQDAG-THYAVMSSYEYLSTGLRQYNLDN 125

Query: 344 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
             DGFYI+PAF+DK+ +HI KNFM LP IK+PLILGIWGGKGQ K+ QC L + K
Sbjct: 126 NMDGFYIAPAFMDKLVVHITKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAK 180

[59][TOP]
>UniRef100_A7PNR4 Chromosome chr8 scaffold_23, whole genome shotgun sequence n=2
           Tax=Vitis vinifera RepID=A7PNR4_VITVI
          Length = 474

 Score =  135 bits (340), Expect = 2e-30
 Identities = 76/157 (48%), Positives = 97/157 (61%), Gaps = 6/157 (3%)
 Frame = +2

Query: 56  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVAS--SRKQMGRWRSIDAGVDASDDQQDI 223
           ++ SSA  G  +    +++A         +VVA     KQ  + +      D SDDQQDI
Sbjct: 26  SVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEVDEEKQTSKDKWKGLAFDESDDQQDI 85

Query: 224 TRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIH 397
           TRG+ MVD LFQ    +G TH AV+SS +Y+S     +N  N  DGFYI+PAF+DK+ +H
Sbjct: 86  TRGKGMVDSLFQAPMDSG-THYAVMSSYDYISTGLRQYNLDNTMDGFYIAPAFMDKLVVH 144

Query: 398 IAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           I KNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 145 ITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAK 181

[60][TOP]
>UniRef100_C6YBD7 Chloroplast ribulose-1,5-bisphosphate carboxylase activase
           (Fragment) n=1 Tax=Triticum aestivum RepID=C6YBD7_WHEAT
          Length = 360

 Score =  134 bits (338), Expect = 3e-30
 Identities = 66/120 (55%), Positives = 85/120 (70%), Gaps = 2/120 (1%)
 Frame = +2

Query: 155 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 328
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +
Sbjct: 24  KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLKK 80

Query: 329 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
             F+N   GFYI+PAF+DK+ +H++KNFM LP IK+P ILGIWGGKGQ K+ QC L + K
Sbjct: 81  YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPRILGIWGGKGQGKSFQCELVFAK 140

[61][TOP]
>UniRef100_O49074 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Solanum pennellii RepID=RCA_SOLPN
          Length = 459

 Score =  134 bits (338), Expect = 3e-30
 Identities = 70/146 (47%), Positives = 99/146 (67%), Gaps = 4/146 (2%)
 Frame = +2

Query: 83  QRVGGARVATRSVRRAQLQVVASS--RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLF 256
           ++V    V++  V    L+VVA      +  RW+ +    + SDDQQDI RG+ +VD LF
Sbjct: 38  KKVYAKGVSSPKVSNRNLRVVAQEVDETKEDRWKGLYD--NTSDDQQDIARGKGLVDSLF 95

Query: 257 QGGFGAGGTHNAVLSSQEYLSQSRASF--NNIEDGFYISPAFLDKMTIHIAKNFMDLPKI 430
           Q   G G TH+A+++S EY+SQ+  ++  +N  DGFYI+PAF+DK+ +HI KNF+ LP I
Sbjct: 96  QAPTGTG-THHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNI 154

Query: 431 KVPLILGIWGGKGQDKNLQCALAYKK 508
           KVPLILG+WGGKGQ K+ QC L ++K
Sbjct: 155 KVPLILGVWGGKGQGKSFQCELVFRK 180

[62][TOP]
>UniRef100_Q7X999 Ribulose bisphosphate carboxylase/oxygenase activase 2,
           chloroplastic n=1 Tax=Larrea tridentata RepID=RCA2_LARTR
          Length = 435

 Score =  134 bits (338), Expect = 3e-30
 Identities = 66/115 (57%), Positives = 83/115 (72%), Gaps = 2/115 (1%)
 Frame = +2

Query: 170 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 343
           +W+ +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS +Y+SQ    +N  N
Sbjct: 70  KWKGL--AYDISDDQQDITRGKGMVDTLFQAPMQSG-THYAVMSSYDYISQGLRQYNLDN 126

Query: 344 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
             DGFYI+PAF+DK+ +HI KNF+ LP IK+PLILGIWGGKGQ K+ QC L + K
Sbjct: 127 NMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAK 181

[63][TOP]
>UniRef100_Q7X9A0 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic n=1 Tax=Larrea tridentata RepID=RCA1_LARTR
          Length = 476

 Score =  134 bits (338), Expect = 3e-30
 Identities = 66/115 (57%), Positives = 83/115 (72%), Gaps = 2/115 (1%)
 Frame = +2

Query: 170 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 343
           +W+ +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS +Y+SQ    +N  N
Sbjct: 70  KWKGL--AYDISDDQQDITRGKGMVDTLFQAPMQSG-THYAVMSSYDYISQGLRQYNLDN 126

Query: 344 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
             DGFYI+PAF+DK+ +HI KNF+ LP IK+PLILGIWGGKGQ K+ QC L + K
Sbjct: 127 NMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAK 181

[64][TOP]
>UniRef100_A9TLG8 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TLG8_PHYPA
          Length = 410

 Score =  134 bits (337), Expect = 3e-30
 Identities = 68/119 (57%), Positives = 86/119 (72%), Gaps = 2/119 (1%)
 Frame = +2

Query: 158 KQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASF 337
           K++ RW  +  G D SDDQQDI RG+ MVD LFQG  G G T    +SS +Y+S  + ++
Sbjct: 31  KKVDRWAGL--GNDISDDQQDIQRGKGMVDALFQGAVGLG-TQVVTMSSWDYVSTGQRTY 87

Query: 338 N--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           N  N++DG YI+PAF+DK+ IHIAKNFM+LP IKVPLILG+WGGKGQ K+ QC L   K
Sbjct: 88  NFDNMKDGLYIAPAFMDKLIIHIAKNFMNLPGIKVPLILGVWGGKGQGKSFQCELVMSK 146

[65][TOP]
>UniRef100_Q06B48 Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase large protein isoform n=2 Tax=Acer rubrum
           RepID=Q06B48_ACERU
          Length = 474

 Score =  133 bits (335), Expect = 6e-30
 Identities = 74/158 (46%), Positives = 96/158 (60%), Gaps = 7/158 (4%)
 Frame = +2

Query: 56  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVA----SSRKQMGRWRSIDAGVDASDDQQ 217
           T+ +SA  G  +    +R     V     +VVA    + + +  +WR +    D SDDQQ
Sbjct: 27  TVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGL--AYDTSDDQQ 84

Query: 218 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTI 394
           DITRG+ +VD LFQ   G G TH AV+SS +Y+S   R    N  DGFYI+P F+ K+ +
Sbjct: 85  DITRGKGLVDSLFQAPSGTG-THYAVMSSYDYISTGLRTYLENSMDGFYIAPVFMGKLVV 143

Query: 395 HIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           HI KNFM LP IK+PLILGIWGGKGQ K+ QC L + K
Sbjct: 144 HITKNFMSLPNIKIPLILGIWGGKGQGKSFQCELVFAK 181

[66][TOP]
>UniRef100_Q9M431 Rubisco activase (Fragment) n=1 Tax=Pinus halepensis
           RepID=Q9M431_PINHA
          Length = 226

 Score =  132 bits (332), Expect = 1e-29
 Identities = 63/103 (61%), Positives = 80/103 (77%), Gaps = 2/103 (1%)
 Frame = +2

Query: 206 DDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLS--QSRASFNNIEDGFYISPAFL 379
           DDQQDI RG+  VD LFQ   G+G THNA++SS +Y+S  Q   S +N+ DG+YI+PAF+
Sbjct: 1   DDQQDIRRGKGKVDSLFQAPMGSG-THNAIMSSYDYISTAQRTYSLDNMMDGYYIAPAFM 59

Query: 380 DKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           DK+ +HI+KNFM+LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 60  DKLVVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAK 102

[67][TOP]
>UniRef100_A9NZT0 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=A9NZT0_PICSI
          Length = 363

 Score =  131 bits (329), Expect = 3e-29
 Identities = 62/115 (53%), Positives = 85/115 (73%), Gaps = 2/115 (1%)
 Frame = +2

Query: 170 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 343
           +W+ +    D SDDQ DI RG+  VD LFQ   G+G THN V+S+ +Y+S ++ +  F+N
Sbjct: 73  KWKGL--AFDESDDQMDIRRGKGKVDSLFQAPMGSG-THNVVMSTYDYISTAQRTYDFDN 129

Query: 344 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
             DG+YI+P+F+DK+ +HI+KNFM+LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 130 TMDGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAK 184

[68][TOP]
>UniRef100_A9NV87 Putative uncharacterized protein n=2 Tax=Picea sitchensis
           RepID=A9NV87_PICSI
          Length = 480

 Score =  131 bits (329), Expect = 3e-29
 Identities = 62/115 (53%), Positives = 85/115 (73%), Gaps = 2/115 (1%)
 Frame = +2

Query: 170 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 343
           +W+ +    D SDDQ DI RG+  VD LFQ   G+G THN V+S+ +Y+S ++ +  F+N
Sbjct: 73  KWKGL--AFDESDDQMDIRRGKGKVDSLFQAPMGSG-THNVVMSTYDYISTAQRTYDFDN 129

Query: 344 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
             DG+YI+P+F+DK+ +HI+KNFM+LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 130 TMDGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAK 184

[69][TOP]
>UniRef100_Q8L5T3 Rubisco activase n=1 Tax=Chenopodium quinoa RepID=Q8L5T3_CHEQI
          Length = 438

 Score =  122 bits (306), Expect = 1e-26
 Identities = 66/139 (47%), Positives = 88/139 (63%), Gaps = 2/139 (1%)
 Frame = +2

Query: 98  ARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAG 277
           +R ++ +V+ A  +   S +    RW  +    D SDDQ DI RG+ MVD LFQ    +G
Sbjct: 49  SRASSMTVKAADYE--ESKQSNTDRWAHL--ATDISDDQLDIRRGKGMVDSLFQAPMDSG 104

Query: 278 GTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILG 451
            TH  V SS EY SQ    +N  N+   FYI+P+F+DK+ +HI KN+++LP IKVPLILG
Sbjct: 105 -THVPVQSSLEYESQGLRKYNIDNMLGNFYIAPSFMDKIVVHITKNYLNLPNIKVPLILG 163

Query: 452 IWGGKGQDKNLQCALAYKK 508
           IWGGKGQ K+ QC L + K
Sbjct: 164 IWGGKGQGKSFQCELVFAK 182

[70][TOP]
>UniRef100_C0PQ99 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=C0PQ99_PICSI
          Length = 368

 Score =  120 bits (300), Expect = 7e-26
 Identities = 56/99 (56%), Positives = 76/99 (76%), Gaps = 2/99 (2%)
 Frame = +2

Query: 218 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNNIEDGFYISPAFLDKMT 391
           DI RG+  VD LFQ   G+G THN V+S+ +Y+S ++ +  F+N  DG+YI+P+F+DK+ 
Sbjct: 2   DIRRGKGKVDSLFQAPMGSG-THNVVMSTYDYISTAQRTYDFDNTMDGYYIAPSFMDKLL 60

Query: 392 IHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           +HI+KNFM+LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 61  VHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAK 99

[71][TOP]
>UniRef100_P10871 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=2 Tax=Spinacia oleracea RepID=RCA_SPIOL
          Length = 472

 Score =  119 bits (298), Expect = 1e-25
 Identities = 63/133 (47%), Positives = 83/133 (62%), Gaps = 2/133 (1%)
 Frame = +2

Query: 116 SVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAV 295
           S R   + V A+  ++    +      D SDDQ DI RG+ MVD LFQ    AG TH  +
Sbjct: 48  SSRTTSMTVKAAENEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAG-THVPI 106

Query: 296 LSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKG 469
            SS EY SQ    ++  N+   FYI+PAF+DK+ +HI KNF++LP IK+PLILG+WGGKG
Sbjct: 107 QSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKG 166

Query: 470 QDKNLQCALAYKK 508
           Q K+ QC L + K
Sbjct: 167 QGKSFQCELVFAK 179

[72][TOP]
>UniRef100_B9IFW9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IFW9_POPTR
          Length = 476

 Score =  107 bits (266), Expect = 6e-22
 Identities = 65/171 (38%), Positives = 93/171 (54%), Gaps = 2/171 (1%)
 Frame = +2

Query: 2   PSTTFRPFIQSALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRS 181
           PS     F  ++L+T         V G ++   R+ TR+++ A  +     +    +W+ 
Sbjct: 25  PSWPTSAFFDNSLKT---------VLGSKITNQRLLTRNLKLAA-EYDKEKQPSKDKWKG 74

Query: 182 IDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASF--NNIEDG 355
           +    D SDDQQDITRG+ MVD LFQ   G G TH AV+SS +Y S+    +  +N  DG
Sbjct: 75  L--AFDTSDDQQDITRGKGMVDSLFQAPMGTG-THYAVMSSYDYTSKGLRQYKLDNNMDG 131

Query: 356 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           FYI+ +F+DK+ +HI KNF+ LP IK          KGQ K+ QC L + K
Sbjct: 132 FYIASSFMDKLVVHITKNFLQLPNIK--------ASKGQGKSFQCELVFAK 174

[73][TOP]
>UniRef100_Q9ATC1 Rubisco activase (Fragment) n=1 Tax=Zantedeschia aethiopica
           RepID=Q9ATC1_ZANAE
          Length = 334

 Score =  105 bits (262), Expect = 2e-21
 Identities = 49/78 (62%), Positives = 59/78 (75%), Gaps = 2/78 (2%)
 Frame = +2

Query: 281 THNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGI 454
           THN VLSS EY+S    SFN  N  +G YI+PAF+DK+ +HI KNFM+LP IK+PLILGI
Sbjct: 1   THNPVLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLPNIKIPLILGI 60

Query: 455 WGGKGQDKNLQCALAYKK 508
           WGGKGQ K+ QC L + K
Sbjct: 61  WGGKGQGKSFQCELVFAK 78

[74][TOP]
>UniRef100_A6H5A0 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H5A0_VIGUN
          Length = 236

 Score = 94.0 bits (232), Expect = 5e-18
 Identities = 39/59 (66%), Positives = 50/59 (84%)
 Frame = +2

Query: 332 SFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           +F+N++DG+YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 11  NFDNMKDGYYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAK 69

[75][TOP]
>UniRef100_A6H599 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H599_VIGUN
          Length = 214

 Score = 94.0 bits (232), Expect = 5e-18
 Identities = 39/59 (66%), Positives = 50/59 (84%)
 Frame = +2

Query: 332 SFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           +F+N++DG+YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 22  NFDNMKDGYYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAK 80

[76][TOP]
>UniRef100_A6H596 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H596_VIGUN
          Length = 251

 Score = 94.0 bits (232), Expect = 5e-18
 Identities = 39/59 (66%), Positives = 50/59 (84%)
 Frame = +2

Query: 332 SFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           +F+N++DG+YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 11  NFDNMKDGYYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAK 69

[77][TOP]
>UniRef100_A6H5A1 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H5A1_VIGUN
          Length = 194

 Score = 88.6 bits (218), Expect = 2e-16
 Identities = 37/55 (67%), Positives = 46/55 (83%)
 Frame = +2

Query: 344 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           ++DG+YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 1   MKDGYYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAK 55

[78][TOP]
>UniRef100_A6H598 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H598_VIGUN
          Length = 244

 Score = 88.6 bits (218), Expect = 2e-16
 Identities = 37/55 (67%), Positives = 46/55 (83%)
 Frame = +2

Query: 344 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           ++DG+YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 1   MKDGYYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAK 55

[79][TOP]
>UniRef100_A6H597 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H597_VIGUN
          Length = 229

 Score = 88.6 bits (218), Expect = 2e-16
 Identities = 37/55 (67%), Positives = 46/55 (83%)
 Frame = +2

Query: 344 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           ++DG+YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 1   MKDGYYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAK 55

[80][TOP]
>UniRef100_A9NXN4 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=A9NXN4_PICSI
          Length = 310

 Score = 87.4 bits (215), Expect = 5e-16
 Identities = 36/53 (67%), Positives = 46/53 (86%)
 Frame = +2

Query: 350 DGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           DG+YI+P+F+DK+ +HI+KNFM+LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 2   DGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCELVFAK 54

[81][TOP]
>UniRef100_Q9SX18 Rubisco activase (Fragment) n=1 Tax=Datisca glomerata
           RepID=Q9SX18_DATGL
          Length = 244

 Score = 85.1 bits (209), Expect = 2e-15
 Identities = 36/52 (69%), Positives = 42/52 (80%)
 Frame = +2

Query: 353 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           GFYI+PAF+DK+ +HI KNFM  P IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 1   GFYIAPAFMDKLVVHITKNFMTFPNIKVPLILGIWGGKGQGKSFQCELVFAK 52

[82][TOP]
>UniRef100_Q9FUI0 Ribulose 1,5-bisphosphate carboxylase/oxygenase activase (Fragment)
           n=1 Tax=Zea mays RepID=Q9FUI0_MAIZE
          Length = 308

 Score = 81.6 bits (200), Expect = 3e-14
 Identities = 34/52 (65%), Positives = 42/52 (80%)
 Frame = +2

Query: 353 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           GFYI+  F+DK+ +H++KNFM LP IKVPLILGIWGGKGQ K+ QC L + K
Sbjct: 1   GFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAK 52

[83][TOP]
>UniRef100_C5Y9J8 Putative uncharacterized protein Sb06g031390 n=1 Tax=Sorghum
           bicolor RepID=C5Y9J8_SORBI
          Length = 433

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 11/122 (9%)
 Frame = +2

Query: 173 WRSIDAGVD-------ASDDQQDITRGRE--MVDDLFQGGFGAGGTHNAVLSSQEYLSQS 325
           W S DA  D          D  ++T G    +VDDLF G F  G   + V    +Y  ++
Sbjct: 71  WESKDAEGDDYLYRLGKEADNLNVTVGARAGIVDDLFVGNF-LGKDSDIVF---DYRQKA 126

Query: 326 RASFNNIEDGFYISPAFLDKMTIHIAKNFMD--LPKIKVPLILGIWGGKGQDKNLQCALA 499
             +F  ++  +YI+PAFLDK+  HI KN++   L  IK+PLILG+WGGKGQ K  Q  L 
Sbjct: 127 TRTFEYLQGDYYIAPAFLDKVACHIVKNYIGHLLNNIKIPLILGVWGGKGQGKTFQTELI 186

Query: 500 YK 505
           +K
Sbjct: 187 FK 188

[84][TOP]
>UniRef100_Q9AST9 At1g73110/F3N23_39 n=1 Tax=Arabidopsis thaliana RepID=Q9AST9_ARATH
          Length = 432

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 44/105 (41%), Positives = 63/105 (60%), Gaps = 3/105 (2%)
 Frame = +2

Query: 200 ASDDQQDITRGRE--MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPA 373
           A  D  +I  G    M+DD+F G F  G   + V    +Y  ++  SF +++  +YI+P+
Sbjct: 86  AESDNVNIAVGARSGMIDDVFIGDF-LGKDSDIVF---DYRQKATRSFEHLQGDYYIAPS 141

Query: 374 FLDKMTIHIAKNFMDLP-KIKVPLILGIWGGKGQDKNLQCALAYK 505
           FLDK+ +HI KN++     IK+PLILGIWGGKGQ K  Q  L +K
Sbjct: 142 FLDKVAVHIVKNYLAPSLNIKIPLILGIWGGKGQGKTFQTELIFK 186

[85][TOP]
>UniRef100_Q45YI8 Rubisco activase 2 n=1 Tax=Mesembryanthemum crystallinum
           RepID=Q45YI8_MESCR
          Length = 456

 Score = 77.8 bits (190), Expect = 4e-13
 Identities = 46/105 (43%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
 Frame = +2

Query: 200 ASDDQQDITRGRE--MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPA 373
           A  D  +IT G    ++DDLF G F  G   + V    +Y  +   SF  +   +YI+P 
Sbjct: 110 AEADNTNITVGARPGVIDDLFTGNF-LGRDSDIVF---DYRQKVTRSFEYLRGDYYIAPV 165

Query: 374 FLDKMTIHIAKNFM-DLPKIKVPLILGIWGGKGQDKNLQCALAYK 505
           FLD++  HI KNFM  L  +KVPLILGIWGGKGQ K  Q  L ++
Sbjct: 166 FLDQVVCHIVKNFMAHLLNVKVPLILGIWGGKGQGKTFQTELIFR 210

[86][TOP]
>UniRef100_B5W427 Ribulose bisphosphate carboxylase small chain n=1 Tax=Arthrospira
           maxima CS-328 RepID=B5W427_SPIMA
          Length = 434

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 32/50 (64%), Positives = 41/50 (82%)
 Frame = +2

Query: 356 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYK 505
           +YISP FLDK+++HI KNF+D+P+IKVPLILGI G KG+ K  QC L +K
Sbjct: 3   YYISPRFLDKVSVHITKNFLDIPRIKVPLILGIHGRKGEGKTFQCELVFK 52

[87][TOP]
>UniRef100_B8HYF8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Cyanothece
           sp. PCC 7425 RepID=B8HYF8_CYAP4
          Length = 423

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 30/52 (57%), Positives = 41/52 (78%)
 Frame = +2

Query: 353 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           G+YI+P FLDK+++HI KN++DLP +KVPLILGI G KG+ K   C L +K+
Sbjct: 2   GYYIAPRFLDKLSVHITKNYLDLPNVKVPLILGIHGRKGEGKTFMCELVFKR 53

[88][TOP]
>UniRef100_Q7XN85 Os04g0658300 protein n=1 Tax=Oryza sativa Japonica Group
           RepID=Q7XN85_ORYSJ
          Length = 441

 Score = 73.9 bits (180), Expect = 6e-12
 Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
 Frame = +2

Query: 239 MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM- 415
           +VDDLF G F  G   + V    +Y  ++  +F  ++  +YI+P FLDK+  HI KN++ 
Sbjct: 110 IVDDLFVGNF-LGKDSDIVF---DYRQKATRTFEYLQGDYYIAPLFLDKVACHIVKNYLA 165

Query: 416 DLPKIKVPLILGIWGGKGQDKNLQCALAYK 505
            +  IK+PLILGIWGGKGQ K  Q  L ++
Sbjct: 166 HILTIKIPLILGIWGGKGQGKTFQTELIFR 195

[89][TOP]
>UniRef100_Q01HZ5 OSIGBa0132E09-OSIGBa0108L24.4 protein n=1 Tax=Oryza sativa
           RepID=Q01HZ5_ORYSA
          Length = 441

 Score = 73.9 bits (180), Expect = 6e-12
 Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
 Frame = +2

Query: 239 MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM- 415
           +VDDLF G F  G   + V    +Y  ++  +F  ++  +YI+P FLDK+  HI KN++ 
Sbjct: 110 IVDDLFVGNF-LGKDSDIVF---DYRQKATRTFEYLQGDYYIAPLFLDKVACHIVKNYLA 165

Query: 416 DLPKIKVPLILGIWGGKGQDKNLQCALAYK 505
            +  IK+PLILGIWGGKGQ K  Q  L ++
Sbjct: 166 HILTIKIPLILGIWGGKGQGKTFQTELIFR 195

[90][TOP]
>UniRef100_B9FCX4 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
           Group RepID=B9FCX4_ORYSJ
          Length = 456

 Score = 73.9 bits (180), Expect = 6e-12
 Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
 Frame = +2

Query: 239 MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM- 415
           +VDDLF G F  G   + V    +Y  ++  +F  ++  +YI+P FLDK+  HI KN++ 
Sbjct: 110 IVDDLFVGNF-LGKDSDIVF---DYRQKATRTFEYLQGDYYIAPLFLDKVACHIVKNYLA 165

Query: 416 DLPKIKVPLILGIWGGKGQDKNLQCALAYK 505
            +  IK+PLILGIWGGKGQ K  Q  L ++
Sbjct: 166 HILTIKIPLILGIWGGKGQGKTFQTELIFR 195

[91][TOP]
>UniRef100_B8AVM5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
           RepID=B8AVM5_ORYSI
          Length = 456

 Score = 73.9 bits (180), Expect = 6e-12
 Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
 Frame = +2

Query: 239 MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM- 415
           +VDDLF G F  G   + V    +Y  ++  +F  ++  +YI+P FLDK+  HI KN++ 
Sbjct: 110 IVDDLFVGNF-LGKDSDIVF---DYRQKATRTFEYLQGDYYIAPLFLDKVACHIVKNYLA 165

Query: 416 DLPKIKVPLILGIWGGKGQDKNLQCALAYK 505
            +  IK+PLILGIWGGKGQ K  Q  L ++
Sbjct: 166 HILTIKIPLILGIWGGKGQGKTFQTELIFR 195

[92][TOP]
>UniRef100_B0CCB7 Ribulose bisphosphate carboxylase activase, putative n=1
           Tax=Acaryochloris marina MBIC11017 RepID=B0CCB7_ACAM1
          Length = 416

 Score = 73.2 bits (178), Expect = 1e-11
 Identities = 30/52 (57%), Positives = 42/52 (80%)
 Frame = +2

Query: 353 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           G+Y+SP FLD++ +HI KNFMDLP ++VPLILGI G KG+ K+ QC L +++
Sbjct: 2   GYYLSPRFLDRLAVHITKNFMDLPGLRVPLILGIHGRKGEGKSFQCELLFEQ 53

[93][TOP]
>UniRef100_A9TYZ9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TYZ9_PHYPA
          Length = 458

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 44/102 (43%), Positives = 59/102 (57%), Gaps = 3/102 (2%)
 Frame = +2

Query: 209 DQQDITRGRE--MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLD 382
           D  +IT G    M+D LF G F  G   + V    +Y  +   SF +I   +YI+PAF+D
Sbjct: 104 DNLNITVGARTGMIDSLFTGDF-LGKEADIVF---KYRQKVTRSFEHITGDYYIAPAFMD 159

Query: 383 KMTIHIAKNFMDLP-KIKVPLILGIWGGKGQDKNLQCALAYK 505
           K+  HI KN++      KVPLILG+WGGKGQ K+ Q  L +K
Sbjct: 160 KVVTHIVKNYLAAQIDGKVPLILGVWGGKGQGKSFQTELIFK 201

[94][TOP]
>UniRef100_UPI000198412C PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI000198412C
          Length = 442

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 1/169 (0%)
 Frame = +2

Query: 2   PSTTFRPFIQSALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRS 181
           P    R F + +     +   +S+ +    G +       RR   Q    ++   GR   
Sbjct: 32  PPNALRFFTKFSTSPFSLRALNSSNNDNPTGESAGGEAGQRRISEQSSWEAKDSEGRDYL 91

Query: 182 IDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFY 361
              G +A +    +     ++DDLF G F  G   + V    +Y  +   SF  ++  +Y
Sbjct: 92  YRLGKEADNMNIAVGARAGIIDDLFVGNF-LGRDSDIVF---DYRQKVTRSFEYLQGDYY 147

Query: 362 ISPAFLDKMTIHIAKNFM-DLPKIKVPLILGIWGGKGQDKNLQCALAYK 505
           I+P F+DK+  HI KN++  L    VPLILGIWGGKGQ K+ Q  L ++
Sbjct: 148 IAPVFMDKVVCHIVKNYIAHLLNTNVPLILGIWGGKGQGKSFQTELIFQ 196

[95][TOP]
>UniRef100_Q06721 Ribulose bisphosphate carboxylase/oxygenase activase n=1
           Tax=Anabaena sp. CA RepID=RCA_ANASC
          Length = 415

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 30/51 (58%), Positives = 41/51 (80%)
 Frame = +2

Query: 356 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           +YI+P FLDK+ +HI KNF++LP ++VPLILGI G KG+ K  QC LA++K
Sbjct: 3   YYIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEK 53

[96][TOP]
>UniRef100_Q115H0 Ribulose 1,5-bisphosphate carboxylase small subunit n=1
           Tax=Trichodesmium erythraeum IMS101 RepID=Q115H0_TRIEI
          Length = 423

 Score = 71.6 bits (174), Expect = 3e-11
 Identities = 28/51 (54%), Positives = 41/51 (80%)
 Frame = +2

Query: 356 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           +YISP F+DK+ +HI KNF+++P+I+VPLI+GI G KG+ K  QC L ++K
Sbjct: 3   YYISPRFIDKLAVHITKNFLEIPRIRVPLIIGIHGRKGEGKTFQCQLVFEK 53

[97][TOP]
>UniRef100_Q3M678 Ribulose 1,5-bisphosphate carboxylase small subunit n=1
           Tax=Anabaena variabilis ATCC 29413 RepID=Q3M678_ANAVT
          Length = 414

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 29/51 (56%), Positives = 41/51 (80%)
 Frame = +2

Query: 356 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           +YI+P FLDK+ +HI KNF+++P ++VPLILGI G KG+ K  QC LA++K
Sbjct: 3   YYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEK 53

[98][TOP]
>UniRef100_P58555 Ribulose bisphosphate carboxylase/oxygenase activase n=1 Tax=Nostoc
           sp. PCC 7120 RepID=RCA_ANASP
          Length = 414

 Score = 71.2 bits (173), Expect = 4e-11
 Identities = 29/51 (56%), Positives = 41/51 (80%)
 Frame = +2

Query: 356 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           +YI+P FLDK+ +HI KNF+++P ++VPLILGI G KG+ K  QC LA++K
Sbjct: 3   YYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEK 53

[99][TOP]
>UniRef100_B2J8T8 Ribulose bisphosphate carboxylase, small chain n=1 Tax=Nostoc
           punctiforme PCC 73102 RepID=B2J8T8_NOSP7
          Length = 425

 Score = 70.9 bits (172), Expect = 5e-11
 Identities = 29/52 (55%), Positives = 40/52 (76%)
 Frame = +2

Query: 353 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           G+YI+P FLDK+ +HI KNF+ LP ++VP+ILGI G KG+ K  QC L ++K
Sbjct: 2   GYYIAPRFLDKLAVHITKNFLKLPGVRVPVILGIHGRKGEGKTFQCQLVFEK 53

[100][TOP]
>UniRef100_B9GLS2 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GLS2_POPTR
          Length = 428

 Score = 70.9 bits (172), Expect = 5e-11
 Identities = 39/90 (43%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
 Frame = +2

Query: 239 MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM- 415
           +VD LF G F  G   + V    +Y  +   SF  ++  +YI+P FLDK+  HI KN++ 
Sbjct: 97  VVDSLFAGNF-LGKDSDIVF---DYRQKVTRSFEYLQGDYYIAPLFLDKVVCHIVKNYLA 152

Query: 416 DLPKIKVPLILGIWGGKGQDKNLQCALAYK 505
               +KVPLILGIWGGKGQ K+ Q  L ++
Sbjct: 153 HRLNVKVPLILGIWGGKGQGKSFQTELIFQ 182

[101][TOP]
>UniRef100_B4WNZ5 Ribulose bisphosphate carboxylase, small subunit, putative n=1
           Tax=Synechococcus sp. PCC 7335 RepID=B4WNZ5_9SYNE
          Length = 455

 Score = 70.5 bits (171), Expect = 6e-11
 Identities = 28/51 (54%), Positives = 41/51 (80%)
 Frame = +2

Query: 356 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           +YI+P FL+K+ +HI KN++DLP++KVPLILGI G KG+ K  QC L +++
Sbjct: 3   YYIAPRFLNKLAVHITKNYLDLPQVKVPLILGIHGRKGEGKTFQCELVFER 53

[102][TOP]
>UniRef100_A0Z9K4 Ribulose 1,5-bisphosphate carboxylase/oxygenase activase n=1
           Tax=Nodularia spumigena CCY9414 RepID=A0Z9K4_NODSP
          Length = 416

 Score = 69.7 bits (169), Expect = 1e-10
 Identities = 29/51 (56%), Positives = 40/51 (78%)
 Frame = +2

Query: 356 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           +YI+P FLDK+ +HI KNF++LP ++VPLILGI G KG+ K  QC L ++K
Sbjct: 3   YYIAPRFLDKLGVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCQLVFEK 53

[103][TOP]
>UniRef100_A0YN90 AAA ATPase, central region n=1 Tax=Lyngbya sp. PCC 8106
           RepID=A0YN90_9CYAN
          Length = 445

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 28/51 (54%), Positives = 38/51 (74%)
 Frame = +2

Query: 356 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           +YISP FLDK+ +HI KNF+ +  ++VPLILGI G KG+ K  QC L ++K
Sbjct: 3   YYISPRFLDKLAVHITKNFLKISNLRVPLILGIHGRKGEGKTFQCELVFEK 53

[104][TOP]
>UniRef100_B4W1T9 Ribulose bisphosphate carboxylase, small subunit, putative n=1
           Tax=Microcoleus chthonoplastes PCC 7420
           RepID=B4W1T9_9CYAN
          Length = 447

 Score = 63.9 bits (154), Expect = 6e-09
 Identities = 25/51 (49%), Positives = 40/51 (78%)
 Frame = +2

Query: 356 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           +YI+P+F DK+ +HI KN+++L  ++VPLILGI G KG+ K+ QC L +++
Sbjct: 8   YYIAPSFRDKLAVHITKNYLELEGVRVPLILGIHGRKGEGKSFQCELVFEQ 58

[105][TOP]
>UniRef100_B9RGR9 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast,
           putative n=1 Tax=Ricinus communis RepID=B9RGR9_RICCO
          Length = 428

 Score = 63.9 bits (154), Expect = 6e-09
 Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
 Frame = +2

Query: 239 MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM- 415
           ++D LF G F  G   + V    +Y  +   SF  ++  +YI+P FL  M  HI KN++ 
Sbjct: 98  VIDPLFAGNF-LGRDSDIVF---DYRQKVTRSFEYLKGDYYIAPVFL-VMICHIVKNYIA 152

Query: 416 DLPKIKVPLILGIWGGKGQDKNLQCALAYK 505
            L  +KVPLILGIWGGKGQ K+ Q  L ++
Sbjct: 153 HLLNVKVPLILGIWGGKGQGKSFQTELVFQ 182

[106][TOP]
>UniRef100_A8JIJ0 RuBisCO activase-like protein n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8JIJ0_CHLRE
          Length = 533

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 5/63 (7%)
 Frame = +2

Query: 335 FNNIEDGFYISPAFLDKMTIHIAKNFM-DL----PKIKVPLILGIWGGKGQDKNLQCALA 499
           FNNI   +Y++PAFL K+ +H+AKN++ DL       +VPLILGIWG KG  K  Q  LA
Sbjct: 157 FNNIVGDYYVAPAFLMKVAMHMAKNYLFDLGAMSANTRVPLILGIWGEKGMGKTFQTELA 216

Query: 500 YKK 508
            KK
Sbjct: 217 LKK 219

[107][TOP]
>UniRef100_C1N8N0 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N8N0_9CHLO
          Length = 505

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 39/125 (31%), Positives = 59/125 (47%), Gaps = 17/125 (13%)
 Frame = +2

Query: 182 IDAGVDASDDQQDITRGREMVDDLFQGG----FGAGGTHNAVLSSQEYLSQSRA-SFNNI 346
           ++ G  +S+   ++   + ++DD+F G     F  G   +       Y       SF N+
Sbjct: 105 VELGKQSSNTNTEVGARKGIIDDVFAGTANAKFNLGADSDIASGRLRYRDVEHVRSFKNL 164

Query: 347 EDGFYISPAFLDKMTIHIAKNFM---DLP---------KIKVPLILGIWGGKGQDKNLQC 490
              F++ P F+DK+++H+AKN M   D P           KVPLILG+WG KG  K    
Sbjct: 165 FGDFHVPPLFVDKVSLHVAKNLMADSDNPGASANPLGGLTKVPLILGVWGAKGCGKTFNL 224

Query: 491 ALAYK 505
            LA K
Sbjct: 225 ELACK 229

[108][TOP]
>UniRef100_C1MW61 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1MW61_9CHLO
          Length = 498

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 2/109 (1%)
 Frame = +2

Query: 185 DAGVDASDDQQDITRGREMVDDLFQGGFGAGGT--HNAVLSSQEYLSQSRASFNNIEDGF 358
           + G  +S+ + ++   + +VDD+F G   A      +A +++ E       S  N+ DG 
Sbjct: 93  ELGRQSSNLRTEVGARKGVVDDVFAGTANANFVLGADADIATGELRYTEARSLTNVVDGC 152

Query: 359 YISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYK 505
           Y+ P F+DK+ +H+ KN +     +VPLILGIWG KG  K+    L  +
Sbjct: 153 YVPPRFMDKVCVHLVKNHLAEGVGQVPLILGIWGEKGCGKSYTLELCLR 201

[109][TOP]
>UniRef100_Q2JX50 Ribulose bisphosphate carboxylase/oxygenase activase n=1
           Tax=Synechococcus sp. JA-3-3Ab RepID=Q2JX50_SYNJA
          Length = 407

 Score = 57.0 bits (136), Expect = 7e-07
 Identities = 24/51 (47%), Positives = 34/51 (66%)
 Frame = +2

Query: 356 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCALAYKK 508
           +YI P FL  + +H+ KN + LP + VPLILGI G KG+ K  QC L +++
Sbjct: 3   YYIPPTFLKVVALHLTKNHLPLPDVPVPLILGIHGRKGEGKTFQCNLIFER 53

[110][TOP]
>UniRef100_A4S631 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus
           CCE9901 RepID=A4S631_OSTLU
          Length = 342

 Score = 57.0 bits (136), Expect = 7e-07
 Identities = 39/140 (27%), Positives = 64/140 (45%), Gaps = 22/140 (15%)
 Frame = +2

Query: 152 SRKQMGRWRSIDAGV-DASDDQQDITRGREMVDDLFQ----GGFGAGGTHNAVLSSQEYL 316
           ++K +GR   ++ G  D  +   ++   + +VDD+F     G F  G   +       Y 
Sbjct: 14  TQKNIGRDYLVELGKNDTGNTNTNVGARQGVVDDVFTRNATGEFQLGADSDIASGELRYR 73

Query: 317 SQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM---DLPKIK--------------VPLI 445
            Q    F N+   ++  PAF++K++ H+ KNF+    L  ++               PLI
Sbjct: 74  YQEARKFKNLVGDYHCPPAFMEKVSGHLVKNFLFGGGLRHVREMTNEAGVVVQPPNTPLI 133

Query: 446 LGIWGGKGQDKNLQCALAYK 505
           LG+WGGKG  K+    LA K
Sbjct: 134 LGVWGGKGCGKSFNLELACK 153

[111][TOP]
>UniRef100_P85086 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           (Fragments) n=1 Tax=Arachis hypogaea RepID=RCA_ARAHY
          Length = 140

 Score = 57.0 bits (136), Expect = 7e-07
 Identities = 39/90 (43%), Positives = 43/90 (47%)
 Frame = +2

Query: 197 DASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAF 376
           D SDDQQDITRG  MVD LFQ      GTH AV+SS EY+SQ                  
Sbjct: 5   DISDDQQDITRG--MVDSLFQAPMN-DGTHYAVMSSYEYISQG----------------- 44

Query: 377 LDKMTIHIAKNFMDLPKIKVPLILGIWGGK 466
                            ++VPLILGIWGGK
Sbjct: 45  -----------------LRVPLILGIWGGK 57

[112][TOP]
>UniRef100_Q01AV2 26S proteasome regulatory complex, ATPase RPT4 (ISS) n=1
           Tax=Ostreococcus tauri RepID=Q01AV2_OSTTA
          Length = 584

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
 Frame = +2

Query: 98  ARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAG 277
           AR + R    A+ +  +  R+ + R  ++    DA   Q  I   R  V++    G   G
Sbjct: 3   ARASARVGSTARARAASRGRRVVAR--AVGGREDALGGQDFIYSQRSGVEETLFKGVVLG 60

Query: 278 GTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM----DLPKIKVPLI 445
              +A ++S E+      SF N+E  FY+   F++++  H+AKN +     L   K  ++
Sbjct: 61  V--DADVASGEHREGGFRSFGNVEGEFYVPERFMERVATHVAKNLLADRDGLRSAKPAVM 118

Query: 446 LGIWGGKGQDKNLQCALAYKK 508
           LGIWG KG  K     LA K+
Sbjct: 119 LGIWGHKGCGKTFNVELACKR 139

[113][TOP]
>UniRef100_C1E7G4 Predicted protein (Fragment) n=1 Tax=Micromonas sp. RCC299
           RepID=C1E7G4_9CHLO
          Length = 396

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 36/104 (34%), Positives = 49/104 (47%), Gaps = 15/104 (14%)
 Frame = +2

Query: 239 MVDDLFQGG----FGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 406
           +VDD+F G     F  G   +       Y  +   SFNN+   F++   F+D++ +HIAK
Sbjct: 109 VVDDVFAGKNNSKFNLGADSDIASGKLRYTMER--SFNNLVGEFHVPKQFVDRVALHIAK 166

Query: 407 NFM-----------DLPKIKVPLILGIWGGKGQDKNLQCALAYK 505
           N +            L   +VPLILGIWG KG  K     LA K
Sbjct: 167 NLLMDSTNPGVGENALGLTRVPLILGIWGSKGCGKTFNLELACK 210

[114][TOP]
>UniRef100_B5GAS7 Truncated magnesium or manganese-dependent protein phosphatase
           (Fragment) n=1 Tax=Streptomyces sp. SPB74
           RepID=B5GAS7_9ACTO
          Length = 445

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 64/180 (35%), Positives = 77/180 (42%), Gaps = 28/180 (15%)
 Frame = +3

Query: 48  CRSP*RAAPSAASAWAVPA---SPPVACAGRSCRLWPLAASRWAAGGRST---RASTRPM 209
           CRS  RA PSAASA +  A   SPP      S   W  A+ R ++   ST   R S R  
Sbjct: 130 CRSSRRATPSAASASSTRARTPSPPRNATSSSP--WAAASPRASSAPCSTSRRRTSPRDS 187

Query: 210 TSKTSLAAARWWTTC----SRAASVPAAP---------TTQCCPARST*ARAAPRSTT*R 350
           + + S A +R   TC    SR  + P AP         T+  CPA    A  AP S T R
Sbjct: 188 SRRCSRAPSR---TCPAPRSRCVTGPPAPGATSAATGTTSYRCPA----AVPAPSSATCR 240

Query: 351 TASTSRPLSW---------TR*PSTLPRTSWTCPRSRCPSFWVSGVARARTRTYSARSPT 503
             + + P SW         TR  +T P  SW  PRS     W S    A +R  S R PT
Sbjct: 241 ATTRTPPPSWASSASRCAPTRPRATRPPPSWPAPRSS----WTSWTPTA-SRPASTRRPT 295

[115][TOP]
>UniRef100_A2ZH35 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
           RepID=A2ZH35_ORYSI
          Length = 360

 Score = 53.9 bits (128), Expect = 6e-06
 Identities = 40/124 (32%), Positives = 55/124 (44%)
 Frame = +2

Query: 137 QVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYL 316
           +V    + +  RW+ +    D SDDQQDITRG+ +VD LFQ   G  GTH A +      
Sbjct: 51  EVDEEKQTEQDRWKGL--AYDISDDQQDITRGKGLVDSLFQAPMG-DGTHEARV------ 101

Query: 317 SQSRASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCAL 496
              +    N++ G +           HI+KN M LP I             Q K+ QC L
Sbjct: 102 --PQPGSQNVQPGQHHG---------HISKNLMKLPNI-------------QGKSFQCEL 137

Query: 497 AYKK 508
            + K
Sbjct: 138 VFAK 141

[116][TOP]
>UniRef100_Q53MC3 Expressed protein n=1 Tax=Oryza sativa Japonica Group
           RepID=Q53MC3_ORYSJ
          Length = 366

 Score = 53.5 bits (127), Expect = 8e-06
 Identities = 40/124 (32%), Positives = 55/124 (44%)
 Frame = +2

Query: 137 QVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYL 316
           +V    + +  RW+ +    D SDDQQDITRG+ +VD LFQ   G  GTH A +      
Sbjct: 51  EVDEEKQTEQDRWKGL--AYDISDDQQDITRGKGLVDSLFQAPMG-DGTHEARV------ 101

Query: 317 SQSRASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQDKNLQCAL 496
              +    N++ G +           HI+KN M LP I             Q K+ QC L
Sbjct: 102 --PQPGSQNVQPGQHHG---------HISKNLMKLPNI-------------QGKSFQCDL 137

Query: 497 AYKK 508
            + K
Sbjct: 138 VFAK 141