AV641879 ( HCL041g08_r )

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[1][TOP]
>UniRef100_A8I9W8 RNA binding protein n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8I9W8_CHLRE
          Length = 270

 Score =  102 bits (255), Expect(2) = 4e-28
 Identities = 53/53 (100%), Positives = 53/53 (100%)
 Frame = +3

Query: 201 GKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDIIRGSF 359
           GKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDIIRGSF
Sbjct: 20  GKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDIIRGSF 72

 Score = 45.8 bits (107), Expect(2) = 4e-28
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = +2

Query: 50  MRTQNSVMECPRSMVGRVIGEARRRVE 130
           MRTQNSVMECPRSMVGRVIG++   V+
Sbjct: 1   MRTQNSVMECPRSMVGRVIGKSGETVK 27

[2][TOP]
>UniRef100_C1N8T9 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N8T9_9CHLO
          Length = 156

 Score = 54.3 bits (129), Expect(2) = 1e-08
 Identities = 25/49 (51%), Positives = 34/49 (69%)
 Frame = +3

Query: 201 GKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDII 347
           G+ GET+K LQ+ TGA IQIDQSV P  ++I+G  Y V+ A   + D+I
Sbjct: 108 GRGGETIKGLQSQTGARIQIDQSVSPCLITITGNPYCVDAASRAVVDVI 156

 Score = 28.5 bits (62), Expect(2) = 1e-08
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 68  VMECPRSMVGRVIGEARRRVE 130
           ++ECP+ MVGRVIG     ++
Sbjct: 95  IVECPKDMVGRVIGRGGETIK 115

[3][TOP]
>UniRef100_C1E3L8 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E3L8_9CHLO
          Length = 1640

 Score = 50.4 bits (119), Expect(2) = 5e-08
 Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = +3

Query: 201  GKSGETVKALQTYTGATIQIDQSV-DPTRVSISGAAYSVNLAVSIITDIIRG 353
            GK GET+K LQ ++GA +Q+DQ+V DP  V I+GA  SV  A   +  II G
Sbjct: 1469 GKGGETIKGLQAHSGARVQVDQTVGDPCHVVIAGAPASVAYAAEAVAAIIAG 1520

 Score = 30.0 bits (66), Expect(2) = 5e-08
 Identities = 10/24 (41%), Positives = 19/24 (79%)
 Frame = +2

Query: 59   QNSVMECPRSMVGRVIGEARRRVE 130
            ++ ++ECP++MVGRVIG+    ++
Sbjct: 1453 ESRIVECPKNMVGRVIGKGGETIK 1476

[4][TOP]
>UniRef100_Q00SS8 Circadian RNA-binding protein CHLAMY 1 subunit C1 (ISS) n=1
           Tax=Ostreococcus tauri RepID=Q00SS8_OSTTA
          Length = 393

 Score = 45.4 bits (106), Expect(2) = 2e-07
 Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
 Frame = +3

Query: 201 GKSGETVKALQTYTGATIQIDQS---VDPTRVSISGAAYSVNLAVSIITDIIRGS 356
           G+ GET+K+LQ  +GA + IDQS    +P RV+ISG   SV+ A  ++ +++ G+
Sbjct: 147 GRGGETIKSLQATSGAHVAIDQSGADGEPKRVTISGTRKSVDAASELVENLLLGT 201

 Score = 33.1 bits (74), Expect(2) = 2e-07
 Identities = 14/39 (35%), Positives = 24/39 (61%), Gaps = 4/39 (10%)
 Frame = +2

Query: 26  NAPKSRQKMRTQNSV----MECPRSMVGRVIGEARRRVE 130
           NA + R ++  +N +    +ECP+SMVGR+IG     ++
Sbjct: 116 NAERERLELERENEIVTRSLECPQSMVGRIIGRGGETIK 154

[5][TOP]
>UniRef100_A8HYR6 C1, subunit of the circadian RNA-binding protein CHLAMY 1 n=2
           Tax=Chlamydomonas reinhardtii RepID=A8HYR6_CHLRE
          Length = 511

 Score = 48.1 bits (113), Expect(2) = 3e-07
 Identities = 24/52 (46%), Positives = 35/52 (67%)
 Frame = +3

Query: 201 GKSGETVKALQTYTGATIQIDQSVDPTRVSISGAAYSVNLAVSIITDIIRGS 356
           GK GET+K LQ    A+IQIDQS  P +V+I+G ++++  A   I D+IR +
Sbjct: 302 GKGGETIKDLQKRFNASIQIDQSAMPCKVTITGPSHTIASARRAIEDLIRST 353

 Score = 29.6 bits (65), Expect(2) = 3e-07
 Identities = 10/21 (47%), Positives = 17/21 (80%)
 Frame = +2

Query: 68  VMECPRSMVGRVIGEARRRVE 130
           V+ECP++MVGR+IG+    ++
Sbjct: 289 VLECPKTMVGRIIGKGGETIK 309