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[1][TOP]
>UniRef100_A8I5W6 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii
RepID=A8I5W6_CHLRE
Length = 208
Score = 179 bits (455), Expect = 8e-44
Identities = 101/118 (85%), Positives = 101/118 (85%)
Frame = +3
Query: 132 EQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELR 311
EQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQ AADELR
Sbjct: 88 EQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQ-----------------AADELR 130
Query: 312 KRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLE 485
KRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLE
Sbjct: 131 KRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLE 188
[2][TOP]
>UniRef100_Q018Z5 ATP-dependent DNA helicase (ISS) n=1 Tax=Ostreococcus tauri
RepID=Q018Z5_OSTTA
Length = 859
Score = 103 bits (258), Expect = 5e-21
Identities = 57/135 (42%), Positives = 79/135 (58%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
P H GLN Q AAV G V AGPGSGKT L+ RV L+ P++I +TF
Sbjct: 67 PVHVRGLNDAQRAAVL-APVGATRVLAGPGSGKTHVLIGRVAHLIHEEKTPPREILCITF 125
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA ELR+RLRD +G AA+E+ GTFHS++AR+LR+H + + G G +G
Sbjct: 126 TNKAAKELRERLRDKIGEVAAKEITAGTFHSVAARMLRRHGERIP-GIGRTG-------- 176
Query: 465 KDFRVLEEDEQSAVI 509
+F + + D+ ++
Sbjct: 177 -EFTIYDADDSKQIV 190
[3][TOP]
>UniRef100_C1E652 ATP-dependent DNA helicase n=1 Tax=Micromonas sp. RCC299
RepID=C1E652_9CHLO
Length = 907
Score = 101 bits (252), Expect = 3e-20
Identities = 62/165 (37%), Positives = 90/165 (54%), Gaps = 1/165 (0%)
Frame = +3
Query: 18 SPARAAPDQQSGSSGKPHRSHDP-PSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPG 194
+P R P Q+ ++G +H P PH G+N EQ+AA+ A + V AGPG
Sbjct: 23 APPRWGPVQRRAAAGFSSPAHSAEPMFRADAPHLEGMNDEQIAAIVAPVAPM-KVLAGPG 81
Query: 195 SGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFH 374
SGKTR LV RV L+ V P I +TFT KAA E+R+RL ++G A ++ GTFH
Sbjct: 82 SGKTRVLVGRVTHLINELGVPPSHILCITFTNKAAREMRERLVASVGEENARQITAGTFH 141
Query: 375 SLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQSAVI 509
S+++R+LR+H L+D G DF + +E + ++I
Sbjct: 142 SVASRMLRKHVHLLDG----------YGRGNDFVIYDEADTKSII 176
[4][TOP]
>UniRef100_A9ETX5 ATP-depentend DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56'
RepID=A9ETX5_SORC5
Length = 820
Score = 101 bits (251), Expect = 3e-20
Identities = 58/149 (38%), Positives = 86/149 (57%), Gaps = 2/149 (1%)
Frame = +3
Query: 75 SHDPPSSPPPPPH--HSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVH 248
+HD SPPP P + LN Q A +AG + + AG GSGKTR +V R+ L+ H
Sbjct: 6 AHDADRSPPPEPGLPYEELNEPQARAASH-AAGPLLIFAGAGSGKTRVIVYRIANLIVTH 64
Query: 249 SVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGA 428
V P +I +TFT KAA E+++RL +G +++ +GTFH++ ARLLR+H +
Sbjct: 65 RVPPYRILAVTFTNKAATEMKRRLEGLIGPDIVKDLWVGTFHAVCARLLRRHHE------ 118
Query: 429 GASGGSRLAGLRKDFRVLEEDEQSAVIIR 515
AGL K+F + ++D+Q AV+ R
Sbjct: 119 -------AAGLDKNFIIYDDDDQRAVMNR 140
[5][TOP]
>UniRef100_Q2RU59 ATP-dependent DNA helicase, Rep family n=1 Tax=Rhodospirillum
rubrum ATCC 11170 RepID=Q2RU59_RHORT
Length = 768
Score = 98.2 bits (243), Expect = 3e-19
Identities = 62/145 (42%), Positives = 82/145 (56%), Gaps = 6/145 (4%)
Frame = +3
Query: 81 DPPSSPPP------PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQ 242
D PS P P PP +GLN EQ AAV G V V +G G+GKTR L AR+ +++
Sbjct: 8 DEPSPPAPRFQGAEPPWLAGLNPEQRAAVTTTD-GPVLVLSGAGTGKTRVLTARLAQILA 66
Query: 243 VHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDR 422
VRP Q+ +TFT +AA E+R+R +G AE+V LGTFH+L R+LR+H LV
Sbjct: 67 TRPVRPWQVLAVTFTNRAAREMRERAGAMIG-PMAEQVWLGTFHALGVRMLRRHGDLV-- 123
Query: 423 GAGASGGSRLAGLRKDFRVLEEDEQ 497
GLR F +L+ D+Q
Sbjct: 124 -----------GLRSGFTILDADDQ 137
[6][TOP]
>UniRef100_A7IF81 UvrD/REP helicase n=1 Tax=Xanthobacter autotrophicus Py2
RepID=A7IF81_XANP2
Length = 817
Score = 97.8 bits (242), Expect = 4e-19
Identities = 62/163 (38%), Positives = 88/163 (53%)
Frame = +3
Query: 9 RPDSPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAG 188
RP PA P ++G G R+ ++PP P + +GLN EQ AV+ + L+ V AG
Sbjct: 7 RPAEPAPERPAPRAG--GIAARATAISAAPPAPDYLNGLNPEQREAVETLDGPLL-VLAG 63
Query: 189 PGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGT 368
G+GKTR L ARV ++ P QI V+TFT KAA E++ R+ +G LGT
Sbjct: 64 AGTGKTRVLTARVAHILSQGRAYPSQILVVTFTNKAAREMKDRIHAMVGDQIEGMPWLGT 123
Query: 369 FHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQ 497
FHS+ R+LR+H +LV GL+ F +L+ D+Q
Sbjct: 124 FHSIGVRILRRHHELV-------------GLKSGFTILDTDDQ 153
[7][TOP]
>UniRef100_C8WBZ1 UvrD/REP helicase n=1 Tax=Zymomonas mobilis subsp. mobilis NCIMB
11163 RepID=C8WBZ1_ZYMMO
Length = 768
Score = 97.1 bits (240), Expect = 6e-19
Identities = 56/138 (40%), Positives = 80/138 (57%)
Frame = +3
Query: 84 PPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPK 263
P +PP P + + LN EQ V+ + G + V AG G+GKT L AR+ LV+ P
Sbjct: 10 PAETPPEPDYLARLNPEQKEVVR-TTEGALLVLAGAGTGKTAALTARLAYLVETLKAWPS 68
Query: 264 QIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGG 443
QI +TFT KAA E++ R+ D LG+ A LGTFHS++A++LR+H +LV
Sbjct: 69 QILAVTFTNKAAREMQMRVGDLLGSQAENMPWLGTFHSIAAKMLRRHAELV--------- 119
Query: 444 SRLAGLRKDFRVLEEDEQ 497
GL+ DF +L+ D+Q
Sbjct: 120 ----GLKSDFIILDTDDQ 133
[8][TOP]
>UniRef100_A4RXK7 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4RXK7_OSTLU
Length = 657
Score = 97.1 bits (240), Expect = 6e-19
Identities = 54/131 (41%), Positives = 76/131 (58%), Gaps = 2/131 (1%)
Frame = +3
Query: 123 LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAAD 302
LN +Q AAV G V AGPGSGKT L+ RV L+ P++I +TFT KAA
Sbjct: 1 LNDDQRAAVL-APVGATRVLAGPGSGKTHVLIGRVAHLIHELKTPPREILCITFTNKAAR 59
Query: 303 ELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRK--DFR 476
ELR+RLRD +G AA E+ GTFHS++AR+LR+H G R+ G+ + +F
Sbjct: 60 ELRERLRDKIGDAAAREITAGTFHSVAARMLRRH------------GDRIPGIGRTGEFT 107
Query: 477 VLEEDEQSAVI 509
+ + D+ ++
Sbjct: 108 IYDADDSKQIV 118
[9][TOP]
>UniRef100_Q5NQ07 DNA and RNA helicase n=1 Tax=Zymomonas mobilis RepID=Q5NQ07_ZYMMO
Length = 768
Score = 94.7 bits (234), Expect = 3e-18
Identities = 55/135 (40%), Positives = 79/135 (58%)
Frame = +3
Query: 93 SPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIA 272
+PP P + + LN EQ V+ + G + V AG G+GKT L AR+ LV+ P QI
Sbjct: 13 TPPEPDYLARLNPEQKEVVR-TTEGALLVLAGAGTGKTAALTARLAYLVETLKAWPSQIL 71
Query: 273 VLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRL 452
+TFT KAA E++ R+ D LG+ A LGTFHS++A++LR+H +LV
Sbjct: 72 AVTFTNKAAREMQMRVGDLLGSQAENMPWLGTFHSIAAKMLRRHAELV------------ 119
Query: 453 AGLRKDFRVLEEDEQ 497
GL+ DF +L+ D+Q
Sbjct: 120 -GLKSDFIILDTDDQ 133
[10][TOP]
>UniRef100_Q28NL8 ATP-dependent DNA helicase, Rep family n=1 Tax=Jannaschia sp. CCS1
RepID=Q28NL8_JANSC
Length = 817
Score = 94.7 bits (234), Expect = 3e-18
Identities = 53/136 (38%), Positives = 79/136 (58%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ GLN Q+AAV + G V + AG G+GKTR L AR+ L+ + RP +I +T
Sbjct: 27 PQPYMDGLNPAQIAAVNQLD-GPVLMLAGAGTGKTRALTARIAHLMSTGTARPNEILAVT 85
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG A LGTFH++ +LLR+H + LAGL
Sbjct: 86 FTNKAAREMKTRVGHLLGQPAEGMPWLGTFHAICVKLLRRH-------------AELAGL 132
Query: 462 RKDFRVLEEDEQSAVI 509
+ +F +L+ D+Q+ ++
Sbjct: 133 KSNFTILDTDDQTRLM 148
[11][TOP]
>UniRef100_C5TE45 UvrD/REP helicase n=1 Tax=Zymomonas mobilis subsp. mobilis ATCC
10988 RepID=C5TE45_ZYMMO
Length = 768
Score = 94.7 bits (234), Expect = 3e-18
Identities = 55/135 (40%), Positives = 79/135 (58%)
Frame = +3
Query: 93 SPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIA 272
+PP P + + LN EQ V+ + G + V AG G+GKT L AR+ LV+ P QI
Sbjct: 13 TPPEPDYLARLNPEQKEVVR-TTEGALLVLAGAGTGKTAALTARLAYLVETLKAWPSQIL 71
Query: 273 VLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRL 452
+TFT KAA E++ R+ D LG+ A LGTFHS++A++LR+H +LV
Sbjct: 72 AVTFTNKAAREMQMRVGDLLGSQAENMPWLGTFHSIAAKMLRRHAELV------------ 119
Query: 453 AGLRKDFRVLEEDEQ 497
GL+ DF +L+ D+Q
Sbjct: 120 -GLKSDFIILDTDDQ 133
[12][TOP]
>UniRef100_A8TQW1 UvrD/REP helicase n=1 Tax=alpha proteobacterium BAL199
RepID=A8TQW1_9PROT
Length = 798
Score = 94.7 bits (234), Expect = 3e-18
Identities = 56/138 (40%), Positives = 84/138 (60%)
Frame = +3
Query: 84 PPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPK 263
P +P P + SGLN Q AAV+ + G V V AG G+GKTR L R+ L+ + RP
Sbjct: 22 PVRAPRPDSYLSGLNPAQRAAVEALD-GPVLVLAGAGTGKTRVLTTRLAHLLALGKARPW 80
Query: 264 QIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGG 443
+ +TFT +A+ E+++R+ +G AAE+V LGTFH+L+AR+LR+H ++V
Sbjct: 81 NVLAVTFTNRASREMKERVARIVG-PAAEQVWLGTFHALAARILRRHAEVV--------- 130
Query: 444 SRLAGLRKDFRVLEEDEQ 497
GLR +F +L+ D+Q
Sbjct: 131 ----GLRSNFTILDADDQ 144
[13][TOP]
>UniRef100_Q0AMY6 ATP-dependent DNA helicase, Rep family n=1 Tax=Maricaulis maris
MCS10 RepID=Q0AMY6_MARMM
Length = 763
Score = 94.4 bits (233), Expect = 4e-18
Identities = 54/133 (40%), Positives = 78/133 (58%)
Frame = +3
Query: 99 PPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVL 278
PP P+ GLN+EQ AAV+ + G V V AG G+GKTR L R+ ++ RP +I +
Sbjct: 14 PPTPYLDGLNAEQRAAVEAMD-GPVLVLAGAGTGKTRVLTTRLAHILATGRARPWEILAV 72
Query: 279 TFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAG 458
TFT KAA E+++R+ +G LGTFHS+SA++LR+H +LVD
Sbjct: 73 TFTNKAAREMKERVGKIIGEAVEGVPWLGTFHSVSAQILRRHAELVD------------- 119
Query: 459 LRKDFRVLEEDEQ 497
L+ F +L+ D+Q
Sbjct: 120 LKSSFTILDTDDQ 132
[14][TOP]
>UniRef100_Q1ME62 Putative ATP-dependent DNA helicase n=1 Tax=Rhizobium leguminosarum
bv. viciae 3841 RepID=Q1ME62_RHIL3
Length = 829
Score = 94.0 bits (232), Expect = 5e-18
Identities = 58/161 (36%), Positives = 82/161 (50%)
Frame = +3
Query: 12 PDSPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGP 191
P +PA AP + G R+ P + +GLN EQ AV+ + G V V AG
Sbjct: 25 PAAPAERAPAAPAAGGGIAARAMAARDGGKRPDYLAGLNPEQTEAVETLE-GPVLVLAGA 83
Query: 192 GSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTF 371
G+GKTR L R+ ++ P QI +TFT KAA E+++R+ +G LGTF
Sbjct: 84 GTGKTRVLTTRIAHILNTGRAFPSQILAVTFTNKAAREMKERIALLVGGAVEGMPWLGTF 143
Query: 372 HSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDE 494
HS+ +LLR+H +LV GLR DF +L+ D+
Sbjct: 144 HSIGVKLLRRHGELV-------------GLRSDFTILDTDD 171
[15][TOP]
>UniRef100_A4XDF1 UvrD/REP helicase n=1 Tax=Salinispora tropica CNB-440
RepID=A4XDF1_SALTO
Length = 1067
Score = 93.2 bits (230), Expect = 9e-18
Identities = 63/183 (34%), Positives = 98/183 (53%), Gaps = 18/183 (9%)
Frame = +3
Query: 9 RPDSPARAAPDQQSGSSGKPHRSHDPPS--SPPPPPHH------SGLNS------EQLAA 146
RP P ++ + +P R+ PP +PPP PH SG+ ++L A
Sbjct: 461 RPTEPTPKPKARRPATKPEPRRASPPPPPIAPPPSPHEPFEPMLSGMEEVGTGLLDRLDA 520
Query: 147 VKDVSA----GLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRK 314
++ V+A G + + AGPG+GKTRTL R+ L +V P++ +TFTR+AA+ELR
Sbjct: 521 MQRVAASAPGGPLLIVAGPGTGKTRTLTHRIAYLCAELNVFPERCLAITFTRRAAEELRH 580
Query: 315 RLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDE 494
RL D L AE+V +GTFHS+ ++LR++ AGL DFR+ ++ +
Sbjct: 581 RL-DGLLGPVAEDVTVGTFHSVGLQILREN-------------REAAGLPVDFRIADDAD 626
Query: 495 QSA 503
++A
Sbjct: 627 RAA 629
[16][TOP]
>UniRef100_B4WF43 UvrD/REP helicase domain protein n=1 Tax=Brevundimonas sp. BAL3
RepID=B4WF43_9CAUL
Length = 785
Score = 92.8 bits (229), Expect = 1e-17
Identities = 54/141 (38%), Positives = 80/141 (56%)
Frame = +3
Query: 87 PSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQ 266
P P + GLN EQ AV + + G V V AG G+GKTR L R+ ++ RP +
Sbjct: 18 PDGAGPRDYLEGLNPEQREAV-EATEGPVLVLAGAGTGKTRVLTTRLAHILATGRARPWE 76
Query: 267 IAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGS 446
+ V+TFT KAA E+R+R+ +G +A LGTFHS++A++LR+H +LV
Sbjct: 77 LLVVTFTNKAAREMRERITHLIGPSAEGLRWLGTFHSIAAQILRRHAELV---------- 126
Query: 447 RLAGLRKDFRVLEEDEQSAVI 509
GL+ F +L+ D+Q V+
Sbjct: 127 ---GLKSSFTILDTDDQERVL 144
[17][TOP]
>UniRef100_C6ARQ8 UvrD/REP helicase n=1 Tax=Rhizobium leguminosarum bv. trifolii
WSM1325 RepID=C6ARQ8_RHILS
Length = 826
Score = 92.4 bits (228), Expect = 2e-17
Identities = 58/161 (36%), Positives = 83/161 (51%)
Frame = +3
Query: 12 PDSPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGP 191
P +PA AP G + + + D P + +GLN EQ AV+ + G V V AG
Sbjct: 25 PAAPAERAPAAGGGIAARAMAARDGGKRPD---YLAGLNPEQTEAVETLE-GSVLVLAGA 80
Query: 192 GSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTF 371
G+GKTR L R+ ++ P QI +TFT KAA E+++R+ +G LGTF
Sbjct: 81 GTGKTRVLTTRIAHILNTGRAFPSQILAVTFTNKAAREMKERIALLVGGAVEGMPWLGTF 140
Query: 372 HSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDE 494
HS+ +LLR+H +LV GLR DF +L+ D+
Sbjct: 141 HSIGVKLLRRHGELV-------------GLRSDFTILDTDD 168
[18][TOP]
>UniRef100_B0UDC6 UvrD/REP helicase n=1 Tax=Methylobacterium sp. 4-46
RepID=B0UDC6_METS4
Length = 789
Score = 92.4 bits (228), Expect = 2e-17
Identities = 53/135 (39%), Positives = 75/135 (55%)
Frame = +3
Query: 93 SPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIA 272
+PP + GLN EQ AV + + G V V AG G+GKTR L R+ L+ + RP I
Sbjct: 25 APPGAAYLDGLNPEQRRAV-EATEGPVLVLAGAGTGKTRVLTTRIAHLIAIGRARPFDIL 83
Query: 273 VLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRL 452
+TFT KAA E+++R+ +GA LGTFH++ ++LR+H +LV
Sbjct: 84 AVTFTNKAAREMKERIGGLIGAAGEGMPWLGTFHAIGTKILRRHAELV------------ 131
Query: 453 AGLRKDFRVLEEDEQ 497
GLR DF +L D+Q
Sbjct: 132 -GLRSDFTILGTDDQ 145
[19][TOP]
>UniRef100_A8HYL6 DNA helicase II n=1 Tax=Azorhizobium caulinodans ORS 571
RepID=A8HYL6_AZOC5
Length = 835
Score = 92.4 bits (228), Expect = 2e-17
Identities = 53/137 (38%), Positives = 76/137 (55%)
Frame = +3
Query: 87 PSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQ 266
P++P P + GLN EQ AV+ + G V V AG G+GKTR L R+ ++ P Q
Sbjct: 60 PAAPTRPSYLDGLNPEQREAVETLD-GPVLVLAGAGTGKTRVLTTRIAHILSQGRAYPSQ 118
Query: 267 IAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGS 446
I +TFT KAA E+++R+ +G T LGTFHS+ R+LR+H +LV
Sbjct: 119 ILAVTFTNKAAREMKERIHAMVGDTVEGMPWLGTFHSIGVRILRRHHELV---------- 168
Query: 447 RLAGLRKDFRVLEEDEQ 497
GL+ F +L+ D+Q
Sbjct: 169 ---GLKSGFTILDTDDQ 182
[20][TOP]
>UniRef100_Q5KJH7 ATP-dependent DNA helicase pcra, putative n=1 Tax=Filobasidiella
neoformans RepID=Q5KJH7_CRYNE
Length = 982
Score = 92.4 bits (228), Expect = 2e-17
Identities = 47/104 (45%), Positives = 68/104 (65%)
Frame = +3
Query: 108 PHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFT 287
P+ + LN QL AV + + + AGPGSGKTR L RV LVQ H P +I +TFT
Sbjct: 12 PYLASLNQAQLKAVTASPSVPLQILAGPGSGKTRVLTCRVAYLVQHHKYSPNEIVAVTFT 71
Query: 288 RKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVD 419
K+A+E+RKRL+ LG A+++VLGTFH+ + LR++ +L++
Sbjct: 72 NKSANEMRKRLQKLLGDKQADQLVLGTFHATCVKYLRRYGKLIN 115
[21][TOP]
>UniRef100_Q55WS0 Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans
RepID=Q55WS0_CRYNE
Length = 1089
Score = 92.4 bits (228), Expect = 2e-17
Identities = 47/104 (45%), Positives = 68/104 (65%)
Frame = +3
Query: 108 PHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFT 287
P+ + LN QL AV + + + AGPGSGKTR L RV LVQ H P +I +TFT
Sbjct: 12 PYLASLNQAQLKAVTASPSVPLQILAGPGSGKTRVLTCRVAYLVQHHKYSPNEIVAVTFT 71
Query: 288 RKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVD 419
K+A+E+RKRL+ LG A+++VLGTFH+ + LR++ +L++
Sbjct: 72 NKSANEMRKRLQKLLGDKQADQLVLGTFHATCVKYLRRYGKLIN 115
[22][TOP]
>UniRef100_Q2GSN3 Putative uncharacterized protein n=1 Tax=Chaetomium globosum
RepID=Q2GSN3_CHAGB
Length = 973
Score = 92.4 bits (228), Expect = 2e-17
Identities = 57/142 (40%), Positives = 78/142 (54%)
Frame = +3
Query: 90 SSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQI 269
+S P P +GLN Q AV A V + AGPGSGKT TL ARV+ LV +RP+ +
Sbjct: 3 TSTPNHPILNGLNDAQCRAVTS-DAATVAILAGPGSGKTHTLTARVVWLVDHMGIRPEDV 61
Query: 270 AVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSR 449
V TFT KAA E+++R+ ALG +++LGTFHS+S R L + R
Sbjct: 62 IVATFTVKAAREMKERIGKALGNGRENKIILGTFHSISRRYLAAY-------------GR 108
Query: 450 LAGLRKDFRVLEEDEQSAVIIR 515
GL + F + + + SA+I R
Sbjct: 109 HIGLNQKFGIADSADSSAIIKR 130
[23][TOP]
>UniRef100_C4RHG8 UvrD/REP helicase n=1 Tax=Micromonospora sp. ATCC 39149
RepID=C4RHG8_9ACTO
Length = 1062
Score = 92.0 bits (227), Expect = 2e-17
Identities = 64/185 (34%), Positives = 94/185 (50%), Gaps = 20/185 (10%)
Frame = +3
Query: 9 RPDSPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLN--SEQLAAVKDVSAGLVT-- 176
RP + A + + + +P R PP PP PP S LA +++V GL+
Sbjct: 454 RPTAEPAAKAKRPAAAKVEPKRKPAPPPPPPIPPQPSPHEPFEPMLAGMEEVGTGLLDRL 513
Query: 177 ----------------VSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADEL 308
+ AGPG+GKTRTL R+ L +V P++ +TFTR+AA+EL
Sbjct: 514 DAMQRVAASAPGGPLLIVAGPGTGKTRTLTHRIAYLCAELNVFPERCLAITFTRRAAEEL 573
Query: 309 RKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEE 488
R RL D L AE++ +GTFHSL +LR++ AGA AGL DFR+ ++
Sbjct: 574 RHRL-DGLLGPVAEDITVGTFHSLGLTILREN-------AGA------AGLPADFRIADD 619
Query: 489 DEQSA 503
+++A
Sbjct: 620 ADRAA 624
[24][TOP]
>UniRef100_UPI00003840C2 COG0210: Superfamily I DNA and RNA helicases n=1
Tax=Magnetospirillum magnetotacticum MS-1
RepID=UPI00003840C2
Length = 760
Score = 91.7 bits (226), Expect = 3e-17
Identities = 57/159 (35%), Positives = 86/159 (54%)
Frame = +3
Query: 33 APDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRT 212
A D ++ +S P R+ P PP P GLN EQ AV + G V V +G G+GKT+
Sbjct: 6 ALDDEAPASPPPPRASGPRPVPPDAPWLKGLNPEQFQAVT-TTEGPVLVLSGAGTGKTKV 64
Query: 213 LVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARL 392
L +R+ ++ + +P Q +TFT +AA E+++R+ +G ++ + LGTFHSL R+
Sbjct: 65 LTSRLAHILASNLAQPWQCLAVTFTNRAAREMKERVAQLVG-PVSDGIWLGTFHSLCLRI 123
Query: 393 LRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQSAVI 509
LR H + V GL DF VL+ D+Q V+
Sbjct: 124 LRSHAEAV-------------GLSGDFTVLDADDQMRVL 149
[25][TOP]
>UniRef100_B4RFE2 DNA helicase II n=1 Tax=Phenylobacterium zucineum HLK1
RepID=B4RFE2_PHEZH
Length = 774
Score = 91.7 bits (226), Expect = 3e-17
Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 9/154 (5%)
Frame = +3
Query: 75 SHDPPS---------SPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARV 227
S++PP+ PP + GLN EQ AV + G V V AG G+GKTR L R+
Sbjct: 5 SYEPPAPRVSDLARVDPPAADYLQGLNPEQREAVL-ATEGPVLVLAGAGTGKTRVLTTRL 63
Query: 228 LELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHF 407
++ RP ++ +TFT KAA E+R+R+ +G A LGTFHS++A++LR+H
Sbjct: 64 AHILATGKARPWELLAVTFTNKAAREMRERISHMIGPAAEGLRWLGTFHSVAAQILRRHA 123
Query: 408 QLVDRGAGASGGSRLAGLRKDFRVLEEDEQSAVI 509
+LV GL+ ++ +L++D+Q +I
Sbjct: 124 ELV-------------GLKSNYTILDDDDQERLI 144
[26][TOP]
>UniRef100_A9B0L3 UvrD/REP helicase n=1 Tax=Herpetosiphon aurantiacus ATCC 23779
RepID=A9B0L3_HERA2
Length = 758
Score = 91.7 bits (226), Expect = 3e-17
Identities = 54/130 (41%), Positives = 76/130 (58%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN++Q AV+ + G V V AGPGSGKTR L R+ L+ VRP I +TFT KAA
Sbjct: 8 GLNAQQQRAVQAIH-GPVLVLAGPGSGKTRVLTHRIAYLINEVGVRPYNILAVTFTNKAA 66
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R+R+ + +G + A +V++GTFHS+ AR LR+ Q + R DF V
Sbjct: 67 REMRERIGNLIGESRAHDVMMGTFHSICARWLRRDIQHLQRA-------------NDFVV 113
Query: 480 LEEDEQSAVI 509
+ D+Q V+
Sbjct: 114 YDADDQQRVM 123
[27][TOP]
>UniRef100_Q2W9E6 Superfamily I DNA and RNA helicase n=1 Tax=Magnetospirillum
magneticum AMB-1 RepID=Q2W9E6_MAGSA
Length = 864
Score = 91.3 bits (225), Expect = 4e-17
Identities = 57/159 (35%), Positives = 85/159 (53%)
Frame = +3
Query: 33 APDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRT 212
A D ++ +S P R+ P PP P GLN EQ AV G V V +G G+GKT+
Sbjct: 109 ALDDEAPASPPPSRASGPRPVPPDAPWLQGLNPEQFQAVTTTD-GPVLVLSGAGTGKTKV 167
Query: 213 LVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARL 392
L +R+ ++ + +P Q +TFT +AA E+++R+ +G ++ + LGTFHSL R+
Sbjct: 168 LTSRLAHILASNLAQPWQCLAVTFTNRAAREMKERVGQLVG-PVSDGIWLGTFHSLCLRI 226
Query: 393 LRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQSAVI 509
LR H + V GL DF VL+ D+Q V+
Sbjct: 227 LRSHAEAV-------------GLGGDFTVLDSDDQMRVL 252
[28][TOP]
>UniRef100_A7HVW2 UvrD/REP helicase n=1 Tax=Parvibaculum lavamentivorans DS-1
RepID=A7HVW2_PARL1
Length = 778
Score = 91.3 bits (225), Expect = 4e-17
Identities = 54/130 (41%), Positives = 73/130 (56%)
Frame = +3
Query: 108 PHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFT 287
P+ GLN+EQ AV+ + G V V AG G+GKTR L R+ L+ P QI +TFT
Sbjct: 31 PYLEGLNAEQREAVEALD-GPVLVLAGAGTGKTRVLTTRLAHLLATRKAWPGQILAVTFT 89
Query: 288 RKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRK 467
KAA E+R R+ +G LGTFH+L A++LR+H + LAGLR
Sbjct: 90 NKAAREMRDRIGALIGGVVEGMQWLGTFHALGAKILRRH-------------AELAGLRS 136
Query: 468 DFRVLEEDEQ 497
DF +L+ D+Q
Sbjct: 137 DFTILDADDQ 146
[29][TOP]
>UniRef100_B8IF10 UvrD/REP helicase n=1 Tax=Methylobacterium nodulans ORS 2060
RepID=B8IF10_METNO
Length = 816
Score = 90.9 bits (224), Expect = 5e-17
Identities = 51/135 (37%), Positives = 76/135 (56%)
Frame = +3
Query: 93 SPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIA 272
+PP + GLN+EQ AV + + G V V AG G+GKTR L R+ L+ + RP I
Sbjct: 62 APPSAAYLEGLNAEQRRAV-EATEGPVLVLAGAGTGKTRVLTTRIAHLIAIGRARPFDIL 120
Query: 273 VLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRL 452
+TFT KAA E+++R+ +G+ LGTFH++ ++LR+H +LV
Sbjct: 121 AVTFTNKAAREMKERIGALIGSAGEGMPWLGTFHAIGTKILRRHAELV------------ 168
Query: 453 AGLRKDFRVLEEDEQ 497
GL+ DF +L D+Q
Sbjct: 169 -GLKSDFTILGTDDQ 182
[30][TOP]
>UniRef100_Q8GM52 Helicase II n=1 Tax=Zymomonas mobilis RepID=Q8GM52_ZYMMO
Length = 777
Score = 90.9 bits (224), Expect = 5e-17
Identities = 54/135 (40%), Positives = 78/135 (57%)
Frame = +3
Query: 93 SPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIA 272
+PP P + + LN EQ V+ + G + V AG G+GKT L AR+ LV+ P QI
Sbjct: 12 TPPEPDYLARLNPEQKEVVR-TTEGALLVLAGAGTGKTAALTARLAYLVETLKAWPSQIL 70
Query: 273 VLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRL 452
+TFT KAA E++ R+ LG+ A LGTFHS++A++LR+H +LV
Sbjct: 71 AVTFTNKAAREMQMRVGYLLGSFAENMPWLGTFHSIAAKMLRRHAELV------------ 118
Query: 453 AGLRKDFRVLEEDEQ 497
GL+ DF +L+ D+Q
Sbjct: 119 -GLKSDFIILDTDDQ 132
[31][TOP]
>UniRef100_Q2CDW6 Putative uvrD/DNA Helicase II n=1 Tax=Oceanicola granulosus
HTCC2516 RepID=Q2CDW6_9RHOB
Length = 794
Score = 90.9 bits (224), Expect = 5e-17
Identities = 52/131 (39%), Positives = 75/131 (57%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
PP+ GLN Q AAV+ + G V + AG G+GKT+ L R++ L+ S RP +I +TF
Sbjct: 26 PPYLDGLNPAQRAAVEALE-GPVLMLAGAGTGKTKALTTRIVHLLCTGSARPNEILAVTF 84
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA E++ R+ LG LGTFHS+ +LLR+H + LAGL+
Sbjct: 85 TNKAAREMKSRIGGQLGEAVEGMPWLGTFHSICVKLLRRH-------------AELAGLK 131
Query: 465 KDFRVLEEDEQ 497
+F +L+ D+Q
Sbjct: 132 SNFTILDTDDQ 142
[32][TOP]
>UniRef100_C1ZTS5 DNA/RNA helicase, superfamily I n=1 Tax=Rhodothermus marinus DSM
4252 RepID=C1ZTS5_RHOMR
Length = 1032
Score = 90.9 bits (224), Expect = 5e-17
Identities = 73/179 (40%), Positives = 95/179 (53%), Gaps = 11/179 (6%)
Frame = +3
Query: 6 DRPD-SPARAA-PDQQSGSSGKPHRSHDPPSSPPP---PPHHS------GLNSEQLAAVK 152
D P+ +PAR P S +P R +P +PPP PP + GL+ EQ AA
Sbjct: 427 DLPEPTPARKKRPAASEPSLPRPSRMAEP--TPPPLHTPPRNGSGGLLVGLDPEQQAAAT 484
Query: 153 DVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDAL 332
+ G V V AGPG+GKTRTL R+ L++ V P Q +TFTR+AADE+R RL+ L
Sbjct: 485 -YTDGPVLVVAGPGTGKTRTLTYRLAYLIKERGVDPAQCLAVTFTRRAADEMRTRLQALL 543
Query: 333 GATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQSAVI 509
G AA +V + TFH L LL+ + G RL GL + RV E EQ AV+
Sbjct: 544 GEAAA-DVTVTTFHGLGLELLQTY------------GDRL-GLPQPLRVATEAEQRAVL 588
[33][TOP]
>UniRef100_A9E2V6 DNA helicase II, putative n=1 Tax=Oceanibulbus indolifex HEL-45
RepID=A9E2V6_9RHOB
Length = 805
Score = 90.5 bits (223), Expect = 6e-17
Identities = 51/132 (38%), Positives = 75/132 (56%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ GLN Q AAV+ + G V + AG G+GKTR L AR++ L+ RP ++ +T
Sbjct: 24 PQPYLEGLNPAQRAAVETMD-GPVLMLAGAGTGKTRALTARIVHLLNTGRARPNEVLAVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG LGTFH++ +LLR+H +LV GL
Sbjct: 83 FTNKAAREMKNRVGQMLGQQVEGMPWLGTFHAICVKLLRRHAELV-------------GL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[34][TOP]
>UniRef100_Q1GNQ5 ATP-dependent DNA helicase, Rep family n=1 Tax=Sphingopyxis
alaskensis RepID=Q1GNQ5_SPHAL
Length = 770
Score = 90.1 bits (222), Expect = 8e-17
Identities = 56/152 (36%), Positives = 79/152 (51%), Gaps = 4/152 (2%)
Frame = +3
Query: 66 PHRSHDPPSSPPP----PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLE 233
PH P P P PP+ GLN Q AV + G V + AG G+GKT L AR+
Sbjct: 2 PHPPASTPDLPRPDPSDPPYLHGLNGPQRQAVL-TTEGPVLMLAGAGTGKTAALTARLAH 60
Query: 234 LVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQL 413
++ P +I +TFT KAA E+R+R+ +G LGTFHS+ AR+LR+H +L
Sbjct: 61 IIATRRAWPSEILAVTFTNKAAREMRERIGRMIGDAVEGMPWLGTFHSICARMLRRHAEL 120
Query: 414 VDRGAGASGGSRLAGLRKDFRVLEEDEQSAVI 509
V GL+ +F +L+ D+Q V+
Sbjct: 121 V-------------GLQSNFTILDTDDQLRVL 139
[35][TOP]
>UniRef100_B0T0E4 UvrD/REP helicase n=1 Tax=Caulobacter sp. K31 RepID=B0T0E4_CAUSK
Length = 804
Score = 90.1 bits (222), Expect = 8e-17
Identities = 52/137 (37%), Positives = 80/137 (58%)
Frame = +3
Query: 99 PPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVL 278
P P + GLN EQ AAV + + G V V AG G+GKTR L R+ ++ RP ++ V+
Sbjct: 39 PLPNYLEGLNPEQRAAV-EATEGPVLVLAGAGTGKTRVLTTRLAHILATGRARPWELLVV 97
Query: 279 TFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAG 458
TFT KAA E+R+R+ +G A LGTFHS++A++LR+H +LV G
Sbjct: 98 TFTNKAAREMRERITHIIGDEAEGLRWLGTFHSVAAQILRRHAELV-------------G 144
Query: 459 LRKDFRVLEEDEQSAVI 509
L+ + +++ D+Q ++
Sbjct: 145 LKSSYTIIDTDDQERLM 161
[36][TOP]
>UniRef100_B7RP88 UvrD/REP helicase domain protein n=1 Tax=Roseobacter sp. GAI101
RepID=B7RP88_9RHOB
Length = 806
Score = 90.1 bits (222), Expect = 8e-17
Identities = 51/132 (38%), Positives = 76/132 (57%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ GLN Q AAV+ + G V + AG G+GKT+ L AR++ L+ RP +I +T
Sbjct: 24 PQPYLDGLNPAQRAAVEQMD-GPVLMLAGAGTGKTKALTARIVHLMNTGRARPNEILAVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG + LGTFH++ +LLR+H +LV GL
Sbjct: 83 FTNKAAREMKNRVGGMLGQSIEGMPWLGTFHAICVKLLRRHAELV-------------GL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[37][TOP]
>UniRef100_A3SX67 DNA helicase II, putative n=1 Tax=Sulfitobacter sp. NAS-14.1
RepID=A3SX67_9RHOB
Length = 806
Score = 90.1 bits (222), Expect = 8e-17
Identities = 51/132 (38%), Positives = 76/132 (57%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ GLN Q AAV+ + G V + AG G+GKT+ L AR++ L+ RP +I +T
Sbjct: 24 PQPYLDGLNPAQRAAVEQMD-GPVLMLAGAGTGKTKALTARIVHLMNTGRARPNEILAVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG + LGTFH++ +LLR+H +LV GL
Sbjct: 83 FTNKAAREMKNRVGHMLGQSIEGMPWLGTFHAICVKLLRRHAELV-------------GL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[38][TOP]
>UniRef100_A3SBS1 DNA helicase II, putative n=1 Tax=Sulfitobacter sp. EE-36
RepID=A3SBS1_9RHOB
Length = 806
Score = 90.1 bits (222), Expect = 8e-17
Identities = 51/132 (38%), Positives = 76/132 (57%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ GLN Q AAV+ + G V + AG G+GKT+ L AR++ L+ RP +I +T
Sbjct: 24 PQPYLDGLNPAQRAAVEQMD-GPVLMLAGAGTGKTKALTARIVHLMNTGRARPNEILAVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG + LGTFH++ +LLR+H +LV GL
Sbjct: 83 FTNKAAREMKNRVGHMLGQSIEGMPWLGTFHAICVKLLRRHAELV-------------GL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[39][TOP]
>UniRef100_Q7CXZ3 DNA helicase II n=1 Tax=Agrobacterium tumefaciens str. C58
RepID=Q7CXZ3_AGRT5
Length = 824
Score = 89.7 bits (221), Expect = 1e-16
Identities = 59/167 (35%), Positives = 85/167 (50%), Gaps = 4/167 (2%)
Frame = +3
Query: 6 DRPDSPARA---APDQQSGSSGKPHRSHDPPSSPPPPPHH-SGLNSEQLAAVKDVSAGLV 173
+ P +P RA AP + G G R+ P + SGLN EQ AV+ + G V
Sbjct: 13 EEPVAPRRATNNAPSENGGGLGIAARAMAARDQVRPAHDYLSGLNPEQREAVETLD-GPV 71
Query: 174 TVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEE 353
V AG G+GKTR L R+ ++ P QI +TFT KAA E+++R+ +G
Sbjct: 72 LVLAGAGTGKTRVLTTRIAHILATGRAYPSQILAVTFTNKAAREMKERIGVLVGGAVEGM 131
Query: 354 VVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDE 494
LGTFHS+ +LLR+H +L+ GL+ DF +L+ D+
Sbjct: 132 PWLGTFHSIGVKLLRRHAELI-------------GLKSDFTILDTDD 165
[40][TOP]
>UniRef100_A9GDF5 UvrD/REP helicase n=1 Tax=Phaeobacter gallaeciensis BS107
RepID=A9GDF5_9RHOB
Length = 787
Score = 89.7 bits (221), Expect = 1e-16
Identities = 51/132 (38%), Positives = 77/132 (58%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ GLN Q AAV+ + G V + AG G+GKT+ L AR++ L+ + +P +I +T
Sbjct: 24 PMPYLDGLNPAQRAAVECLE-GPVLMLAGAGTGKTKALTARIVHLLTTGTAKPNEILAVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E+++R+ LG LGTFHS+ +LLR+H +LV GL
Sbjct: 83 FTNKAAREMKERVAGMLGQAVEGMPWLGTFHSICVKLLRRHAELV-------------GL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDADDQ 141
[41][TOP]
>UniRef100_A9EPF9 DNA helicase II, putative n=1 Tax=Phaeobacter gallaeciensis 2.10
RepID=A9EPF9_9RHOB
Length = 786
Score = 89.7 bits (221), Expect = 1e-16
Identities = 51/132 (38%), Positives = 77/132 (58%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ GLN Q AAV+ + G V + AG G+GKT+ L AR++ L+ + +P +I +T
Sbjct: 24 PMPYLDGLNPAQRAAVECLE-GPVLMLAGAGTGKTKALTARIVHLLTTGTAKPNEILAVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E+++R+ LG LGTFHS+ +LLR+H +LV GL
Sbjct: 83 FTNKAAREMKERVAGMLGQAVEGMPWLGTFHSICVKLLRRHAELV-------------GL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[42][TOP]
>UniRef100_Q163H5 DNA helicase II, putative n=1 Tax=Roseobacter denitrificans OCh 114
RepID=Q163H5_ROSDO
Length = 810
Score = 89.4 bits (220), Expect = 1e-16
Identities = 50/132 (37%), Positives = 75/132 (56%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ GLN Q AV+ + G V + AG G+GKTR L AR++ L+ RP ++ +T
Sbjct: 24 PQPYLDGLNPAQREAVEQLD-GPVLMLAGAGTGKTRALTARIVHLLNTGRARPNEVLAVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ + LG LGTFH++ +LLR+H +LV GL
Sbjct: 83 FTNKAAREMKNRVGEMLGQPIEGMPWLGTFHAICVKLLRRHAELV-------------GL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[43][TOP]
>UniRef100_C3MEH1 DNA helicase II n=1 Tax=Rhizobium sp. NGR234 RepID=C3MEH1_RHISN
Length = 871
Score = 89.4 bits (220), Expect = 1e-16
Identities = 58/163 (35%), Positives = 82/163 (50%)
Frame = +3
Query: 6 DRPDSPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSA 185
D +P + AP + G R+ P + SGLN EQ AV+ + G V V A
Sbjct: 12 DEEPAPRKPAP----AAGGIAARAMAARDKTQRPDYLSGLNPEQREAVETLE-GPVLVLA 66
Query: 186 GPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLG 365
G G+GKTR L R+ ++ P QI +TFT KAA E+++R+ +G LG
Sbjct: 67 GAGTGKTRVLTTRIAHILSTGRAYPSQILAVTFTNKAAREMKERIGVLVGHAVEGMPWLG 126
Query: 366 TFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDE 494
TFHS+ +LLR+H +LV GLR DF +L+ D+
Sbjct: 127 TFHSIGVKLLRRHAELV-------------GLRSDFTILDTDD 156
[44][TOP]
>UniRef100_B5ZWG4 UvrD/REP helicase n=1 Tax=Rhizobium leguminosarum bv. trifolii
WSM2304 RepID=B5ZWG4_RHILW
Length = 825
Score = 89.4 bits (220), Expect = 1e-16
Identities = 59/161 (36%), Positives = 84/161 (52%)
Frame = +3
Query: 12 PDSPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGP 191
P +PA AP G + + + D S P + +GLN EQ AV+ + G V V AG
Sbjct: 25 PAAPAGRAP-ATGGIAARAMAARDGGSRPD---YLAGLNPEQTEAVETLE-GPVLVLAGA 79
Query: 192 GSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTF 371
G+GKTR L R+ ++ P QI +TFT KAA E+++R+ +G LGTF
Sbjct: 80 GTGKTRVLTTRIAHILNTGRAFPSQILAVTFTNKAAREMKERIALLVGGAVEGMPWLGTF 139
Query: 372 HSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDE 494
HS+ +LLR+H +LV GLR DF +L+ D+
Sbjct: 140 HSIGVKLLRRHGELV-------------GLRSDFTILDTDD 167
[45][TOP]
>UniRef100_A0NVM7 DNA helicase II protein n=1 Tax=Labrenzia aggregata IAM 12614
RepID=A0NVM7_9RHOB
Length = 812
Score = 89.4 bits (220), Expect = 1e-16
Identities = 56/163 (34%), Positives = 84/163 (51%)
Frame = +3
Query: 21 PARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSG 200
PA A QQ G + + + P + +GLN EQ AV + + G V V AG G+G
Sbjct: 24 PAPAPVRQQGGIAARAMAARRAPD------YLTGLNPEQRLAV-ETTEGPVLVLAGAGTG 76
Query: 201 KTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSL 380
KTR L R+ ++ RP +I +TFT KAA E+++R+ +G LGTFHS+
Sbjct: 77 KTRVLTTRIAHILATGLARPSEILAVTFTNKAAREMKERIAGFVGGNVEGMAWLGTFHSI 136
Query: 381 SARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQSAVI 509
++LR+H +LV GL+ F +L+ D+Q +I
Sbjct: 137 CVKILRKHAELV-------------GLKSSFSILDTDDQIRLI 166
[46][TOP]
>UniRef100_Q7S6H2 Putative uncharacterized protein n=1 Tax=Neurospora crassa
RepID=Q7S6H2_NEUCR
Length = 850
Score = 89.4 bits (220), Expect = 1e-16
Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Frame = +3
Query: 93 SPPPPPHHSGLNSEQLAAVKDVSAGLVTVS--AGPGSGKTRTLVARVLELVQVHSVRPKQ 266
SP PP HS L+S A + V++ TV+ AGPGSGKT TL +RV+ LV +P+
Sbjct: 2 SPSAPPKHSILDSLNNAQARAVTSDAATVAILAGPGSGKTHTLTSRVVWLVDHVGYQPQD 61
Query: 267 IAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGS 446
+ V TFT KAA E+++R+ ALG +++LGTFHS++ R L +
Sbjct: 62 VVVATFTVKAAREMKERIGKALGNGRENKIILGTFHSIARRYLAAY-------------G 108
Query: 447 RLAGLRKDFRVLEEDEQSAVIIR 515
R GL + F + ++++ ++I R
Sbjct: 109 RHIGLSEKFSIADDNDSRSIITR 131
[47][TOP]
>UniRef100_Q6MFN4 Related to ATP-dependent DNA helicase n=1 Tax=Neurospora crassa
RepID=Q6MFN4_NEUCR
Length = 1105
Score = 89.4 bits (220), Expect = 1e-16
Identities = 53/143 (37%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
Frame = +3
Query: 93 SPPPPPHHSGLNSEQLAAVKDVSAGLVTVS--AGPGSGKTRTLVARVLELVQVHSVRPKQ 266
SP PP HS L+S A + V++ TV+ AGPGSGKT TL +RV+ LV +P+
Sbjct: 2 SPSAPPKHSILDSLNNAQARAVTSDAATVAILAGPGSGKTHTLTSRVVWLVDHVGYQPQD 61
Query: 267 IAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGS 446
+ V TFT KAA E+++R+ ALG +++LGTFHS++ R L +
Sbjct: 62 VVVATFTVKAAREMKERIGKALGNGRENKIILGTFHSIARRYLAAY-------------G 108
Query: 447 RLAGLRKDFRVLEEDEQSAVIIR 515
R GL + F + ++++ ++I R
Sbjct: 109 RHIGLSEKFSIADDNDSRSIITR 131
[48][TOP]
>UniRef100_Q1YJA3 UvrD/REP helicase n=1 Tax=Aurantimonas manganoxydans SI85-9A1
RepID=Q1YJA3_MOBAS
Length = 852
Score = 89.0 bits (219), Expect = 2e-16
Identities = 52/135 (38%), Positives = 77/135 (57%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
P + SGLN+EQ AAV + + G V V AG G+GKTR L R+ ++ P QI +TF
Sbjct: 8 PDYLSGLNAEQRAAV-ETTEGPVLVLAGAGTGKTRVLTTRIAHILATGRAWPSQILAVTF 66
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA E+++R+ +G LGTFHS+ ++LR+H + LAGL+
Sbjct: 67 TNKAAREMKQRIGLLVGEQVEGMPWLGTFHSIGVKILRRH-------------AELAGLK 113
Query: 465 KDFRVLEEDEQSAVI 509
+F +L+ D+Q +I
Sbjct: 114 SNFTILDTDDQIRLI 128
[49][TOP]
>UniRef100_C1ZTD8 DNA/RNA helicase, superfamily I n=1 Tax=Rhodothermus marinus DSM
4252 RepID=C1ZTD8_RHOMR
Length = 768
Score = 89.0 bits (219), Expect = 2e-16
Identities = 56/144 (38%), Positives = 79/144 (54%), Gaps = 5/144 (3%)
Frame = +3
Query: 93 SPPPPPHHS-----GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVR 257
+P P P + GLN Q AV+ V+ G V + AGPGSGKTRTL R+ L+ R
Sbjct: 16 TPEPLPEAAARILEGLNPVQRQAVQ-VTEGPVLIIAGPGSGKTRTLTHRIAYLIATGRAR 74
Query: 258 PKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGAS 437
P QI LTFT KAA E+ +R+ +GA AA + +GTFH++ AR+LR+
Sbjct: 75 PHQILALTFTNKAAREMMERIERLVGAEAARHIWMGTFHAIFARILRRE----------- 123
Query: 438 GGSRLAGLRKDFRVLEEDEQSAVI 509
G R+ G DF + + D+ ++
Sbjct: 124 -GHRI-GYTPDFSIYDTDDSERLL 145
[50][TOP]
>UniRef100_A4F1M5 DNA helicase II, putative n=1 Tax=Roseobacter sp. SK209-2-6
RepID=A4F1M5_9RHOB
Length = 794
Score = 89.0 bits (219), Expect = 2e-16
Identities = 52/132 (39%), Positives = 76/132 (57%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ GLN Q AV+ + G V + AG G+GKT+ L AR++ L+ S R +I +T
Sbjct: 24 PTPYLEGLNPAQREAVECLE-GPVLMLAGAGTGKTKALTARIVHLLNTGSARTNEILAVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E+++R+ LG A LGTFHS+ +LLR+H + LAGL
Sbjct: 83 FTNKAAREMKERVGGMLGQPAEGMPWLGTFHSICVKLLRRH-------------AELAGL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[51][TOP]
>UniRef100_A3SN17 DNA helicase II, putative n=1 Tax=Roseovarius nubinhibens ISM
RepID=A3SN17_9RHOB
Length = 782
Score = 89.0 bits (219), Expect = 2e-16
Identities = 52/132 (39%), Positives = 75/132 (56%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ GLN EQ AV+ + G V + AG G+GKT+ L +R+ L+ S RP +I +T
Sbjct: 24 PRPYLDGLNPEQREAVERLD-GPVLMLAGAGTGKTKALTSRIAHLLSTGSARPDEILAVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG LGTFHS+ +LLR+H +LV GL
Sbjct: 83 FTNKAAREMKDRVAAHLGEAVEGMRWLGTFHSICVKLLRRHAELV-------------GL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[52][TOP]
>UniRef100_Q98KF3 DNA helicase II n=1 Tax=Mesorhizobium loti RepID=Q98KF3_RHILO
Length = 817
Score = 88.6 bits (218), Expect = 2e-16
Identities = 53/132 (40%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
PP + GLN EQ AV + + G V V AG G+GKTR L R+ ++ P QI +T
Sbjct: 10 PPDYLKGLNPEQRLAV-ETTEGPVLVLAGAGTGKTRVLTTRIAHILATGKAFPSQILAVT 68
Query: 282 FTRKAADELRKRLRDALGATAAEEVV-LGTFHSLSARLLRQHFQLVDRGAGASGGSRLAG 458
FT KAA E+++R+ +G E + LGTFHS+ +LLR+H + LAG
Sbjct: 69 FTNKAAREMKQRIGILIGEGNVEGMPWLGTFHSIGVKLLRRH-------------AELAG 115
Query: 459 LRKDFRVLEEDE 494
LR DF +L+ D+
Sbjct: 116 LRSDFTILDTDD 127
[53][TOP]
>UniRef100_Q8NS28 Superfamily I DNA and RNA helicases n=1 Tax=Corynebacterium
glutamicum RepID=Q8NS28_CORGL
Length = 763
Score = 88.6 bits (218), Expect = 2e-16
Identities = 53/141 (37%), Positives = 79/141 (56%)
Frame = +3
Query: 87 PSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQ 266
P +P P GLN +Q AAV+ + + L+ V AG GSGKT L R+ L++ V P+Q
Sbjct: 5 PFTPGSPDLIDGLNEQQRAAVEHIGSPLLIV-AGAGSGKTAVLTRRIAYLMRYRGVHPQQ 63
Query: 267 IAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGS 446
I +TFT KAA E+R+R+ +G AE + + TFHS+ R+LRQ QLV+
Sbjct: 64 ILAITFTNKAAAEMRERVSQLVG-PVAERMWVATFHSVCVRILRQQAQLVE--------- 113
Query: 447 RLAGLRKDFRVLEEDEQSAVI 509
GL +F + + D+ ++
Sbjct: 114 ---GLNTNFTIYDSDDSRRLL 131
[54][TOP]
>UniRef100_A7NGD4 UvrD/REP helicase n=1 Tax=Roseiflexus castenholzii DSM 13941
RepID=A7NGD4_ROSCS
Length = 759
Score = 88.6 bits (218), Expect = 2e-16
Identities = 57/132 (43%), Positives = 70/132 (53%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN Q AV + G V V AGPGSGKTR L RV L+ VH V P I +TFT KAA
Sbjct: 10 GLNPAQRQAVT-AAPGPVLVLAGPGSGKTRVLTRRVAYLIGVHGVDPHHILAVTFTNKAA 68
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R RL LG A + +GTFHS+ AR LR+ S G +DF +
Sbjct: 69 REMRDRLEKLLGPGEAAALTVGTFHSICARFLRR-------------DSIHLGRERDFAI 115
Query: 480 LEEDEQSAVIIR 515
+ D+Q V+ R
Sbjct: 116 YDTDDQLRVMKR 127
[55][TOP]
>UniRef100_A4QCJ7 Putative uncharacterized protein n=1 Tax=Corynebacterium glutamicum
R RepID=A4QCJ7_CORGB
Length = 763
Score = 88.6 bits (218), Expect = 2e-16
Identities = 53/141 (37%), Positives = 79/141 (56%)
Frame = +3
Query: 87 PSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQ 266
P +P P GLN +Q AAV+ + + L+ V AG GSGKT L R+ L++ V P+Q
Sbjct: 5 PFTPGSPDLIDGLNEQQRAAVEHIGSPLLIV-AGAGSGKTAVLTRRIAYLMRYRGVHPQQ 63
Query: 267 IAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGS 446
I +TFT KAA E+R+R+ +G AE + + TFHS+ R+LRQ QLV+
Sbjct: 64 ILAITFTNKAAAEMRERVSQLVG-PVAERMWVATFHSVCVRILRQQAQLVE--------- 113
Query: 447 RLAGLRKDFRVLEEDEQSAVI 509
GL +F + + D+ ++
Sbjct: 114 ---GLNTNFTIYDSDDSRRLL 131
[56][TOP]
>UniRef100_A3V6N4 Putative uvrD/DNA Helicase II n=1 Tax=Loktanella vestfoldensis
SKA53 RepID=A3V6N4_9RHOB
Length = 797
Score = 88.6 bits (218), Expect = 2e-16
Identities = 50/133 (37%), Positives = 76/133 (57%)
Frame = +3
Query: 99 PPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVL 278
P P+ GLN Q AV+ + G V + AG G+GKT+ L +R+ ++ S RP+++ +
Sbjct: 25 PAMPYLDGLNPAQRQAVETLD-GPVLMLAGAGTGKTKALTSRIAHVLATRSARPQEVLAV 83
Query: 279 TFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAG 458
TFT KAA E++ R+ +G LGTFHS+SA+LLR+H +LV G
Sbjct: 84 TFTNKAAREMKHRIAALMGEAVEGLPWLGTFHSVSAKLLRRHAELV-------------G 130
Query: 459 LRKDFRVLEEDEQ 497
L+ F +L+ D+Q
Sbjct: 131 LQSSFTILDTDDQ 143
[57][TOP]
>UniRef100_Q89FY7 DNA helicase II n=1 Tax=Bradyrhizobium japonicum RepID=Q89FY7_BRAJA
Length = 872
Score = 88.2 bits (217), Expect = 3e-16
Identities = 59/160 (36%), Positives = 81/160 (50%)
Frame = +3
Query: 18 SPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGS 197
S + PD Q + G R+ + P + SGLN EQ AV+ + G V V AG G+
Sbjct: 23 SKITSVPDHQPAAGGIAARAR----ASVGPKYLSGLNPEQREAVETLD-GPVLVLAGAGT 77
Query: 198 GKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHS 377
GKTR L R+ ++ RP +I +TFT KAA E++ RL LG LGTFHS
Sbjct: 78 GKTRVLTTRIAHILSQGRARPAEILSVTFTNKAAREMKHRLGQMLGHAVEGMPWLGTFHS 137
Query: 378 LSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQ 497
+ R+LR H + LA L+ +F VL+ D+Q
Sbjct: 138 IGGRILRTH-------------AELAQLKSNFTVLDVDDQ 164
[58][TOP]
>UniRef100_B3PTT1 ATP-dependent DNA helicase II protein n=1 Tax=Rhizobium etli CIAT
652 RepID=B3PTT1_RHIE6
Length = 832
Score = 88.2 bits (217), Expect = 3e-16
Identities = 56/159 (35%), Positives = 81/159 (50%)
Frame = +3
Query: 18 SPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGS 197
+PA AP G + + + D P + +GLN EQ AV+ + G V V AG G+
Sbjct: 33 APAGGAPAAAGGIAARAMAARDGGKRPD---YLAGLNPEQTEAVETLE-GPVLVLAGAGT 88
Query: 198 GKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHS 377
GKTR L R+ ++ P QI +TFT KAA E+++R+ +G LGTFHS
Sbjct: 89 GKTRVLTTRIAHILNTGRAFPSQILAVTFTNKAAREMKERIALLVGGAVEGMPWLGTFHS 148
Query: 378 LSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDE 494
+ +LLR+H +LV GL DF +L+ D+
Sbjct: 149 IGVKLLRRHAELV-------------GLSSDFTILDTDD 174
[59][TOP]
>UniRef100_A8LXE4 UvrD/REP helicase n=1 Tax=Salinispora arenicola CNS-205
RepID=A8LXE4_SALAI
Length = 1062
Score = 88.2 bits (217), Expect = 3e-16
Identities = 62/183 (33%), Positives = 97/183 (53%), Gaps = 18/183 (9%)
Frame = +3
Query: 9 RPDSPARAAPDQQSGSSGKPHRSHDPPS--SPPPPPHH------SGLNS------EQLAA 146
RP PA ++ + +P R+ PP +P P PH +G+ ++L A
Sbjct: 456 RPVEPAPKPKARRPAAKPEPKRAGPPPPPIAPRPSPHEPLEPMLAGMEEVGTGLLDRLDA 515
Query: 147 VKDVSA----GLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRK 314
++ V+A G + + AGPG+GKTRTL R+ L +V P+ +TFTR+AA+ELR
Sbjct: 516 MQRVAASAPGGPLLIVAGPGTGKTRTLTHRIAYLCAELNVFPEHCLAITFTRRAAEELRH 575
Query: 315 RLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDE 494
RL D L AE+V +GTFHS+ ++LR++ AGL DFR+ ++ +
Sbjct: 576 RL-DGLLGPVAEDVTVGTFHSVGLQILREN-------------REAAGLPVDFRIADDAD 621
Query: 495 QSA 503
++A
Sbjct: 622 RTA 624
[60][TOP]
>UniRef100_A1BA15 ATP-dependent DNA helicase, Rep family n=1 Tax=Paracoccus
denitrificans PD1222 RepID=A1BA15_PARDP
Length = 799
Score = 88.2 bits (217), Expect = 3e-16
Identities = 52/132 (39%), Positives = 74/132 (56%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ GLN Q AAV+ + G V + AG G+GKTR L R+ L+ + RP QI +T
Sbjct: 28 PTPYLDGLNPAQRAAVEALD-GPVLLLAGAGTGKTRALTTRIAHLLNLGLARPGQILAVT 86
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG LGTFHS+S ++LR+H +L+ G L
Sbjct: 87 FTNKAAREMKDRIGRLLGEMVEGMPWLGTFHSISVKILRRHAELIGDGE--------LHL 138
Query: 462 RKDFRVLEEDEQ 497
+ F +L+ D+Q
Sbjct: 139 KPSFTILDTDDQ 150
[61][TOP]
>UniRef100_Q1N9D0 UvrD/REP helicase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1N9D0_9SPHN
Length = 758
Score = 88.2 bits (217), Expect = 3e-16
Identities = 54/138 (39%), Positives = 75/138 (54%)
Frame = +3
Query: 84 PPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPK 263
P SP P + GLN+ Q AV + G V V AG G+GKT L AR+ LV P
Sbjct: 4 PAPSPNDPSYLKGLNTPQREAVL-TTEGPVLVLAGAGTGKTAALTARLAHLVATRRAWPS 62
Query: 264 QIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGG 443
+I +TFT KAA E+R R+ +G LGTFH+++AR+LR+H +LV
Sbjct: 63 EILAVTFTNKAAREMRARVGAMIGDAVEGMPWLGTFHAIAARMLRRHAELV--------- 113
Query: 444 SRLAGLRKDFRVLEEDEQ 497
GL+ +F +L+ D+Q
Sbjct: 114 ----GLQSNFTILDTDDQ 127
[62][TOP]
>UniRef100_B6QZZ1 UvrD/REP helicase domain protein n=1 Tax=Pseudovibrio sp. JE062
RepID=B6QZZ1_9RHOB
Length = 812
Score = 88.2 bits (217), Expect = 3e-16
Identities = 55/167 (32%), Positives = 83/167 (49%), Gaps = 17/167 (10%)
Frame = +3
Query: 60 GKPHRSHDPPSSPPP-----------------PPHHSGLNSEQLAAVKDVSAGLVTVSAG 188
G P DP ++P P P + GLN+EQ AV+ ++ G V V AG
Sbjct: 11 GMPSNPADPLAAPQPKAGGIAARAMAARQTTMPAYMEGLNAEQRLAVETIN-GPVLVLAG 69
Query: 189 PGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGT 368
G+GKTR L R+ ++ P QI +TFT KAA E+++R+ +G LGT
Sbjct: 70 AGTGKTRVLTTRIAHILATGHATPGQILAVTFTNKAAREMKERIGAYIGENVEGMAWLGT 129
Query: 369 FHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQSAVI 509
FH++ ++LR+H +LV GL+ F +L+ D+Q +I
Sbjct: 130 FHAICVKILRRHAELV-------------GLKSSFSILDTDDQVRLI 163
[63][TOP]
>UniRef100_A9H0P3 UvrD/REP helicase n=1 Tax=Roseobacter litoralis Och 149
RepID=A9H0P3_9RHOB
Length = 868
Score = 88.2 bits (217), Expect = 3e-16
Identities = 50/132 (37%), Positives = 74/132 (56%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ GLN Q AV+ + G V + AG G+GKTR L AR++ L+ RP ++ +T
Sbjct: 24 PQPYLDGLNPAQREAVEQLD-GPVLMLAGAGTGKTRALTARIVHLLNTGRARPNEVLAVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG LGTFH++ +LLR+H +LV GL
Sbjct: 83 FTNKAAREMKNRVGAMLGQPVEGMPWLGTFHAICVKLLRRHAELV-------------GL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[64][TOP]
>UniRef100_A6FQK5 Putative uvrD/DNA Helicase II n=1 Tax=Roseobacter sp. AzwK-3b
RepID=A6FQK5_9RHOB
Length = 786
Score = 88.2 bits (217), Expect = 3e-16
Identities = 51/132 (38%), Positives = 75/132 (56%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ LN EQ AAV+ + G V + AG G+GKT+ L R++ L+ S RP +I +T
Sbjct: 24 PMPYLDDLNPEQRAAVQALE-GPVLMLAGAGTGKTKALTKRIVHLLNTGSARPSEILAVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG LGTFHS+ ++LR+H +LV GL
Sbjct: 83 FTNKAAREMKSRVGRMLGEAVEGMPWLGTFHSICVKILRRHQELV-------------GL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[65][TOP]
>UniRef100_A6UB40 UvrD/REP helicase n=1 Tax=Sinorhizobium medicae WSM419
RepID=A6UB40_SINMW
Length = 850
Score = 87.8 bits (216), Expect = 4e-16
Identities = 58/163 (35%), Positives = 83/163 (50%)
Frame = +3
Query: 6 DRPDSPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSA 185
D +P +AA + + G R+ P + SGLN EQ AV+ + G V V A
Sbjct: 12 DEEPAPRQAA----AATGGIAARAMAARDKAQRPDYLSGLNPEQREAVEALE-GPVLVLA 66
Query: 186 GPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLG 365
G G+GKTR L R+ ++ P QI +TFT KAA E+++R+ +G LG
Sbjct: 67 GAGTGKTRVLTTRIAHILSTGRAFPSQILAVTFTNKAAREMKERIGVLVGHAVEGMPWLG 126
Query: 366 TFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDE 494
TFHS+ +LLR+H +LV GLR DF +L+ D+
Sbjct: 127 TFHSIGVKLLRRHAELV-------------GLRSDFTILDTDD 156
[66][TOP]
>UniRef100_A4YZG4 DNA helicase II n=1 Tax=Bradyrhizobium sp. ORS278
RepID=A4YZG4_BRASO
Length = 865
Score = 87.8 bits (216), Expect = 4e-16
Identities = 58/155 (37%), Positives = 82/155 (52%)
Frame = +3
Query: 33 APDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRT 212
APD Q + G R+ S + +GLN EQ AV+ + G V V AG G+GKTR
Sbjct: 12 APDHQPVAGGIAARARAAASGGAR--YLAGLNPEQRDAVETLD-GPVLVLAGAGTGKTRV 68
Query: 213 LVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARL 392
L R+ ++ + RP +I +TFT KAA E++ RL + LG LGTFHS++ R+
Sbjct: 69 LTTRIAHILSMGRARPGEILSVTFTNKAAREMKTRLAEMLGQAVEGMPWLGTFHSIAGRI 128
Query: 393 LRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQ 497
LR H +LV L+ +F VL+ D+Q
Sbjct: 129 LRSHAELVQ-------------LKSNFTVLDVDDQ 150
[67][TOP]
>UniRef100_C6QE69 UvrD/REP helicase n=1 Tax=Hyphomicrobium denitrificans ATCC 51888
RepID=C6QE69_9RHIZ
Length = 818
Score = 87.8 bits (216), Expect = 4e-16
Identities = 50/131 (38%), Positives = 72/131 (54%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
P + GLN EQ AV + + G + V AG G+GKTR L R+ ++ P QI +TF
Sbjct: 60 PTYLDGLNPEQREAV-ETTEGPLLVLAGAGTGKTRVLTTRIAHILATGKAYPSQILAVTF 118
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA E+R R+ +G T LGTFHS+ ++LR+H +LV GL+
Sbjct: 119 TNKAAREMRDRIGGLIGGTLEGMSWLGTFHSIGVKILRRHAELV-------------GLK 165
Query: 465 KDFRVLEEDEQ 497
F +L++D+Q
Sbjct: 166 SGFTILDDDDQ 176
[68][TOP]
>UniRef100_Q92NP4 Probable DNA helicase II n=1 Tax=Sinorhizobium meliloti
RepID=Q92NP4_RHIME
Length = 857
Score = 87.4 bits (215), Expect = 5e-16
Identities = 52/130 (40%), Positives = 72/130 (55%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
P + SGLN EQ AV+ + G V V AG G+GKTR L R+ ++ P QI +TF
Sbjct: 41 PDYVSGLNPEQREAVEALE-GPVLVLAGAGTGKTRVLTTRIAHILSTGRAYPSQILAVTF 99
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA E+++R+ +G LGTFHS+ +LLR+H +LV GLR
Sbjct: 100 TNKAAREMKERIGVLVGHAVEGMPWLGTFHSIGVKLLRRHAELV-------------GLR 146
Query: 465 KDFRVLEEDE 494
DF +L+ D+
Sbjct: 147 SDFTILDTDD 156
[69][TOP]
>UniRef100_Q2K6E9 DNA helicase II protein n=1 Tax=Rhizobium etli CFN 42
RepID=Q2K6E9_RHIEC
Length = 808
Score = 87.4 bits (215), Expect = 5e-16
Identities = 56/162 (34%), Positives = 79/162 (48%)
Frame = +3
Query: 9 RPDSPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAG 188
R P AA + G R+ P + +GLN EQ AV+ + G V V AG
Sbjct: 3 RKPQPPVAAAGRPGAGGGIAARAMAARDGGKRPDYLAGLNPEQTEAVETLE-GPVLVLAG 61
Query: 189 PGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGT 368
G+GKTR L R+ ++ P QI +TFT KAA E+++R+ +G LGT
Sbjct: 62 AGTGKTRVLTTRIAHILNTGRAFPSQILAVTFTNKAAREMKERIALLVGGAVEGMPWLGT 121
Query: 369 FHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDE 494
FHS+ +LLR+H +LV GL DF +L+ D+
Sbjct: 122 FHSIGVKLLRRHAELV-------------GLSSDFTILDTDD 150
[70][TOP]
>UniRef100_B9KXW3 ATP-dependent DNA helicase pcrA n=1 Tax=Thermomicrobium roseum DSM
5159 RepID=B9KXW3_THERP
Length = 771
Score = 87.4 bits (215), Expect = 5e-16
Identities = 56/130 (43%), Positives = 75/130 (57%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GL+++Q AV + G V V AGPGSGKTR L RV L+ RP QI +TFT KAA
Sbjct: 48 GLDADQCVAVT-TTEGPVLVVAGPGSGKTRVLTHRVAYLIGSGRARPWQIVAVTFTNKAA 106
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R+RL LG +A+ V GTFHSL R+LR+ G R+ GL F +
Sbjct: 107 REIRERLGGLLGTESAQLVQAGTFHSLCVRILRR------------DGYRI-GLEPAFTI 153
Query: 480 LEEDEQSAVI 509
+E++Q A++
Sbjct: 154 YDEEDQLALV 163
[71][TOP]
>UniRef100_C9CW07 DNA helicase II n=1 Tax=Silicibacter sp. TrichCH4B
RepID=C9CW07_9RHOB
Length = 811
Score = 87.4 bits (215), Expect = 5e-16
Identities = 50/132 (37%), Positives = 76/132 (57%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ GLN+ Q AV+ + G V + AG G+GKT+ L R++ L+ + R +I +T
Sbjct: 24 PTPYMEGLNAAQREAVETLD-GPVLMLAGAGTGKTKALTTRIVHLLTTNRARTNEILAVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E+++R+ LG A LGTFHS+ +LLR+H +LV GL
Sbjct: 83 FTNKAAREMKERVGRMLGQPAEGMPWLGTFHSICVKLLRRHAELV-------------GL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[72][TOP]
>UniRef100_B7QW20 UvrD/REP helicase domain protein n=1 Tax=Ruegeria sp. R11
RepID=B7QW20_9RHOB
Length = 786
Score = 87.4 bits (215), Expect = 5e-16
Identities = 51/132 (38%), Positives = 75/132 (56%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ GLN Q AV+ + G V + AG G+GKT+ L AR++ L+ S +P +I +T
Sbjct: 24 PMPYLDGLNPAQRQAVECLE-GPVLMLAGAGTGKTKALTARIVHLLMTGSAKPNEILAVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG LGTFHS+ +LLR+H +LV GL
Sbjct: 83 FTNKAAREMKDRVGAMLGQAIEGVPWLGTFHSICVKLLRRHAELV-------------GL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[73][TOP]
>UniRef100_B6B422 UvrD/REP helicase domain protein n=1 Tax=Rhodobacterales bacterium
HTCC2083 RepID=B6B422_9RHOB
Length = 817
Score = 87.4 bits (215), Expect = 5e-16
Identities = 51/135 (37%), Positives = 76/135 (56%)
Frame = +3
Query: 93 SPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIA 272
S P P+ GLN Q AV+ + G V + AG G+GKT+ L AR++ L+ RP +I
Sbjct: 23 SARPMPYLDGLNPAQREAVETLY-GPVLMLAGAGTGKTKALTARIVHLMNAAKARPNEIL 81
Query: 273 VLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRL 452
+TFT KAA E++ R+ LG + LGTFH++ +LLR+H +LV
Sbjct: 82 AVTFTNKAAREMKNRVGGMLGQSIEGMPWLGTFHAICVKLLRRHAELV------------ 129
Query: 453 AGLRKDFRVLEEDEQ 497
GL+ +F +L+ D+Q
Sbjct: 130 -GLKSNFTILDTDDQ 143
[74][TOP]
>UniRef100_C5SJ58 UvrD/REP helicase n=1 Tax=Asticcacaulis excentricus CB 48
RepID=C5SJ58_9CAUL
Length = 772
Score = 87.0 bits (214), Expect = 7e-16
Identities = 50/130 (38%), Positives = 76/130 (58%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN EQ AV+ G V V AG G+GKTR L R+ ++ RP +I +TFT KAA
Sbjct: 27 GLNPEQADAVRSTE-GPVLVLAGAGTGKTRVLTTRIAHILAQGLARPWEILCVTFTNKAA 85
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R+R +G +A LGTFHS++A++LR+H +LV GL+ F +
Sbjct: 86 REMRERTTRLVGPSAEGLSNLGTFHSIAAQMLRRHAELV-------------GLKSSFNI 132
Query: 480 LEEDEQSAVI 509
+++D+Q+ ++
Sbjct: 133 IDDDDQTRLL 142
[75][TOP]
>UniRef100_A3VKQ6 Putative uvrD/DNA Helicase II (Fragment) n=1 Tax=Rhodobacterales
bacterium HTCC2654 RepID=A3VKQ6_9RHOB
Length = 794
Score = 87.0 bits (214), Expect = 7e-16
Identities = 50/132 (37%), Positives = 74/132 (56%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ LN Q AV+ + G V + AG G+GKT+ L AR+ L+ H+ RP +I +T
Sbjct: 7 PSPYLDELNPAQREAVEALD-GPVLMLAGAGTGKTKALTARIAHLLNTHTARPNEILAVT 65
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG LGTFH++ +LLR+H +LV GL
Sbjct: 66 FTNKAAREMKDRVGRHLGEAVEGMPWLGTFHAICVKLLRRHAELV-------------GL 112
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 113 KSNFTILDTDDQ 124
[76][TOP]
>UniRef100_Q5LU84 DNA helicase II, putative n=1 Tax=Ruegeria pomeroyi
RepID=Q5LU84_SILPO
Length = 779
Score = 86.7 bits (213), Expect = 9e-16
Identities = 51/132 (38%), Positives = 74/132 (56%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ LN Q AV+ + G V + AG G+GKT+ L AR++ L+ RP +I +T
Sbjct: 5 PAPYLDDLNPAQREAVERLD-GPVLMLAGAGTGKTKALTARIVHLLMTGRARPNEILAVT 63
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG A LGTFHS+ +LLR+H +LVD L
Sbjct: 64 FTNKAAREMKNRVGRLLGQPAEGMPWLGTFHSICVKLLRRHAELVD-------------L 110
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 111 KSNFTILDTDDQ 122
[77][TOP]
>UniRef100_B7KZ31 UvrD/REP helicase n=1 Tax=Methylobacterium chloromethanicum CM4
RepID=B7KZ31_METC4
Length = 795
Score = 86.7 bits (213), Expect = 9e-16
Identities = 52/134 (38%), Positives = 71/134 (52%)
Frame = +3
Query: 96 PPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAV 275
P + SGLN EQ AV + + G V V AG G+GKTR L R+ L+ RP I
Sbjct: 38 PEGASYLSGLNPEQRRAV-EATEGPVLVLAGAGTGKTRVLTTRIAHLIATGKARPYDILS 96
Query: 276 LTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLA 455
+TFT KAA E++ R+ +G LGTFH++ ++LR+H +LV
Sbjct: 97 VTFTNKAAREMKHRIGGLIGPAGEGMPWLGTFHAIGTKILRRHAELV------------- 143
Query: 456 GLRKDFRVLEEDEQ 497
GLR DF +L D+Q
Sbjct: 144 GLRSDFTILGTDDQ 157
[78][TOP]
>UniRef100_B2ARI7 Predicted CDS Pa_4_7360 n=1 Tax=Podospora anserina
RepID=B2ARI7_PODAN
Length = 988
Score = 86.7 bits (213), Expect = 9e-16
Identities = 52/142 (36%), Positives = 79/142 (55%), Gaps = 2/142 (1%)
Frame = +3
Query: 96 PPPPPHHSGLNSEQLAAVKDVSAGLVTVS--AGPGSGKTRTLVARVLELVQVHSVRPKQI 269
PPP +H LNS A + VS+ TV+ AGPGSGKT TL +RV+ L+ RP+ +
Sbjct: 2 PPPLANHPILNSLNDAQRRAVSSDAATVAILAGPGSGKTHTLTSRVVWLIDQVGYRPEDV 61
Query: 270 AVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSR 449
V TFT KAA E+++R+ ALG +++VLG FHS++ R L + R
Sbjct: 62 VVATFTVKAAREMKERIGKALGDGREKKIVLGNFHSIARRYLAAY-------------GR 108
Query: 450 LAGLRKDFRVLEEDEQSAVIIR 515
G+ + F + ++ + ++I R
Sbjct: 109 KIGINQKFGIADDGDSRSIIAR 130
[79][TOP]
>UniRef100_Q133Z8 ATP-dependent DNA helicase, Rep family n=1 Tax=Rhodopseudomonas
palustris BisB5 RepID=Q133Z8_RHOPS
Length = 847
Score = 86.3 bits (212), Expect = 1e-15
Identities = 53/131 (40%), Positives = 70/131 (53%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
P + SGLN EQ AV+ + G V V AG G+GKTR L R+ ++ RP +I +TF
Sbjct: 32 PAYLSGLNPEQREAVESLD-GPVLVLAGAGTGKTRVLTTRIAHILSTGRARPAEILSVTF 90
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA E++ RL LG LGTFHS+ R+LR H +LV L
Sbjct: 91 TNKAAREMKLRLGQMLGQAVEGMPWLGTFHSIGGRILRYHAELVQ-------------LT 137
Query: 465 KDFRVLEEDEQ 497
+F VL+ D+Q
Sbjct: 138 SNFTVLDTDDQ 148
[80][TOP]
>UniRef100_Q0BVP7 DNA helicase II n=1 Tax=Granulibacter bethesdensis CGDNIH1
RepID=Q0BVP7_GRABC
Length = 759
Score = 86.3 bits (212), Expect = 1e-15
Identities = 59/154 (38%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Frame = +3
Query: 81 DPPSSPPPP-----PHHSG------LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARV 227
D PSSP PP P G LN EQ AAV+ + L+ V AG G+GKTR L R
Sbjct: 3 DHPSSPFPPAAASVPSEGGEAYLARLNPEQRAAVETIDGPLL-VLAGAGTGKTRVLTTRF 61
Query: 228 LELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHF 407
+++ P Q+ +TFT KAA E+R+R+ LG E + LGTFH+L AR+LR+H
Sbjct: 62 AHILKSGRAFPNQVLAVTFTNKAAREMRERVGAILG-EKVEGLWLGTFHALCARMLRRHA 120
Query: 408 QLVDRGAGASGGSRLAGLRKDFRVLEEDEQSAVI 509
+ V GL +F +L+ D+Q ++
Sbjct: 121 EYV-------------GLSSNFSILDSDDQMRLL 141
[81][TOP]
>UniRef100_Q07PQ3 ATP-dependent DNA helicase, Rep family n=1 Tax=Rhodopseudomonas
palustris BisA53 RepID=Q07PQ3_RHOP5
Length = 846
Score = 86.3 bits (212), Expect = 1e-15
Identities = 53/131 (40%), Positives = 72/131 (54%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
P + SGLN EQ AV+ + G V V AG G+GKTR L +R+ ++ RP +I +TF
Sbjct: 36 PAYLSGLNPEQSEAVETLE-GPVLVLAGAGTGKTRVLTSRIAHILSSGRARPGEILSVTF 94
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA E++ RL LG LGTFHS+ R+LR H +LV L+
Sbjct: 95 TNKAAREMKLRLGQMLGQAVEGMPWLGTFHSIGGRILRYHAELVQ-------------LK 141
Query: 465 KDFRVLEEDEQ 497
+F VL+ D+Q
Sbjct: 142 SNFTVLDTDDQ 152
[82][TOP]
>UniRef100_A5V5L2 ATP-dependent DNA helicase UvrD n=1 Tax=Sphingomonas wittichii RW1
RepID=A5V5L2_SPHWW
Length = 892
Score = 86.3 bits (212), Expect = 1e-15
Identities = 66/184 (35%), Positives = 87/184 (47%), Gaps = 20/184 (10%)
Frame = +3
Query: 6 DRPDSPARAAPDQQS--------GSSGK-----------PHRSHDPPSSPPPPPHH-SGL 125
+ P PA AAP S G +G P+ S +P P P + GL
Sbjct: 90 EAPSQPASAAPAGVSPAGVFSVGGGAGAQIGALPRGTPFPNCSRVTQDAPVPEPAYLRGL 149
Query: 126 NSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADE 305
N Q AV + G V V AG G+GKT L AR+ LV P +I +TFT KAA E
Sbjct: 150 NPPQREAVL-TTEGPVLVLAGAGTGKTAALTARLAHLVATRRAWPSEILAVTFTNKAARE 208
Query: 306 LRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLE 485
+R+R+ LG LGTFHS++AR+LR+H +LV GL F +L+
Sbjct: 209 MRERVGRLLGQAVEGMPWLGTFHSVAARMLRRHAELV-------------GLTPSFTILD 255
Query: 486 EDEQ 497
D+Q
Sbjct: 256 TDDQ 259
[83][TOP]
>UniRef100_C8SLV6 UvrD/REP helicase n=1 Tax=Mesorhizobium opportunistum WSM2075
RepID=C8SLV6_9RHIZ
Length = 899
Score = 86.3 bits (212), Expect = 1e-15
Identities = 57/163 (34%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Frame = +3
Query: 9 RPDSPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAG 188
RP +P+ A + G+ + P + GLN EQ AV + + G V V AG
Sbjct: 17 RPTAPSGIAARAMAARGGQNNA----------PDYLKGLNPEQRLAV-ETTEGPVLVLAG 65
Query: 189 PGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVV-LG 365
G+GKTR L R+ ++ P QI +TFT KAA E+++R+ +G E + LG
Sbjct: 66 AGTGKTRVLTTRIAHILATGKAFPSQILAVTFTNKAAREMKQRIGILIGEGNVEGMPWLG 125
Query: 366 TFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDE 494
TFHS+ +LLR+H + LAGLR DF +L+ D+
Sbjct: 126 TFHSIGVKLLRRH-------------AELAGLRSDFTILDTDD 155
[84][TOP]
>UniRef100_A7VW13 Putative uncharacterized protein n=1 Tax=Clostridium leptum DSM 753
RepID=A7VW13_9CLOT
Length = 1078
Score = 86.3 bits (212), Expect = 1e-15
Identities = 55/122 (45%), Positives = 71/122 (58%)
Frame = +3
Query: 30 AAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTR 209
A+P QQ SSG R LNSEQL AV ++ V AGPG+GKT+
Sbjct: 447 ASPTQQKVSSGPQSRIEQ-------------LNSEQLLAVTSQEP-IIEVIAGPGTGKTK 492
Query: 210 TLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSAR 389
TLV+R++ V+ P ++ +TFT KAA ELR+RL+ AL A AA V +GTFHSL +
Sbjct: 493 TLVSRIIYSVEQLHEPPGELTAVTFTNKAAGELRQRLKYALPAKAANAVHIGTFHSLCLK 552
Query: 390 LL 395
LL
Sbjct: 553 LL 554
[85][TOP]
>UniRef100_Q6N434 DNA helicase II n=1 Tax=Rhodopseudomonas palustris
RepID=Q6N434_RHOPA
Length = 848
Score = 85.9 bits (211), Expect = 1e-15
Identities = 53/131 (40%), Positives = 70/131 (53%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
P + SGLN EQ AV+ + G V V AG G+GKTR L R+ ++ RP +I +TF
Sbjct: 32 PAYLSGLNPEQREAVETLD-GPVLVLAGAGTGKTRVLTTRIAHILSTGRARPAEILSVTF 90
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA E++ RL LG LGTFHS+ R+LR H +LV L
Sbjct: 91 TNKAAREMKLRLGQMLGQAVEGMPWLGTFHSIGGRILRYHAELVQ-------------LT 137
Query: 465 KDFRVLEEDEQ 497
+F VL+ D+Q
Sbjct: 138 SNFTVLDTDDQ 148
[86][TOP]
>UniRef100_Q2IYH9 ATP-dependent DNA helicase, Rep family n=1 Tax=Rhodopseudomonas
palustris HaA2 RepID=Q2IYH9_RHOP2
Length = 845
Score = 85.9 bits (211), Expect = 1e-15
Identities = 53/131 (40%), Positives = 70/131 (53%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
P + SGLN EQ AV+ + G V V AG G+GKTR L R+ ++ RP +I +TF
Sbjct: 32 PAYLSGLNPEQREAVETLD-GPVLVLAGAGTGKTRVLTTRIAHILSTGRARPAEILSVTF 90
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA E++ RL LG LGTFHS+ R+LR H +LV L
Sbjct: 91 TNKAAREMKLRLGQMLGQAVEGMPWLGTFHSIGGRILRYHAELVQ-------------LT 137
Query: 465 KDFRVLEEDEQ 497
+F VL+ D+Q
Sbjct: 138 SNFTVLDTDDQ 148
[87][TOP]
>UniRef100_Q1QJS9 ATP-dependent DNA helicase, Rep family n=1 Tax=Nitrobacter
hamburgensis X14 RepID=Q1QJS9_NITHX
Length = 833
Score = 85.9 bits (211), Expect = 1e-15
Identities = 57/157 (36%), Positives = 80/157 (50%)
Frame = +3
Query: 27 RAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKT 206
R P+ Q + G R+ + P + +GLN EQ AV+ + G V V AG G+GKT
Sbjct: 10 RDVPEHQPAAGGIAARAR----AAATPQYLAGLNPEQREAVETLD-GPVLVLAGAGTGKT 64
Query: 207 RTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSA 386
R L R+ ++ RP +I +TFT KAA E++ RL LG LGTFHS+
Sbjct: 65 RVLTTRIAHILSQGRARPGEILSVTFTNKAAREMKHRLGQMLGHAVEGMPWLGTFHSIGG 124
Query: 387 RLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQ 497
R+LR H +LV L+ +F VL+ D+Q
Sbjct: 125 RILRVHAELVH-------------LKSNFTVLDVDDQ 148
[88][TOP]
>UniRef100_B6IP09 UvrD n=1 Tax=Rhodospirillum centenum SW RepID=B6IP09_RHOCS
Length = 1178
Score = 85.9 bits (211), Expect = 1e-15
Identities = 59/161 (36%), Positives = 85/161 (52%)
Frame = +3
Query: 15 DSPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPG 194
D P P + S+ P S P++ P + +GLN Q AV+ + G V V AG G
Sbjct: 7 DPPPTGRPASTAPSATTP-ASVPVPAAGAEPAYLAGLNPAQREAVEALD-GPVLVLAGAG 64
Query: 195 SGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFH 374
+GKTR L R+ L+ P I +TFT KAA E+R+R+ +AL E +GTFH
Sbjct: 65 TGKTRVLTTRLAHLLVTRRAGPWNILTVTFTNKAAREMRERV-EALVGVPTEGWWMGTFH 123
Query: 375 SLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQ 497
+L+AR+LR+H +LV GL+ F +L+ D+Q
Sbjct: 124 ALAARILRRHAELV-------------GLKPSFTILDTDDQ 151
[89][TOP]
>UniRef100_B3QF13 UvrD/REP helicase n=1 Tax=Rhodopseudomonas palustris TIE-1
RepID=B3QF13_RHOPT
Length = 848
Score = 85.9 bits (211), Expect = 1e-15
Identities = 53/131 (40%), Positives = 70/131 (53%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
P + SGLN EQ AV+ + G V V AG G+GKTR L R+ ++ RP +I +TF
Sbjct: 32 PAYLSGLNPEQREAVETLD-GPVLVLAGAGTGKTRVLTTRIAHILSTGRARPAEILSVTF 90
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA E++ RL LG LGTFHS+ R+LR H +LV L
Sbjct: 91 TNKAAREMKLRLGQMLGQAVEGMPWLGTFHSIGGRILRYHAELVQ-------------LT 137
Query: 465 KDFRVLEEDEQ 497
+F VL+ D+Q
Sbjct: 138 SNFTVLDTDDQ 148
[90][TOP]
>UniRef100_A5EPH2 ATP-dependent DNA helicase, Rep family n=1 Tax=Bradyrhizobium sp.
BTAi1 RepID=A5EPH2_BRASB
Length = 855
Score = 85.9 bits (211), Expect = 1e-15
Identities = 58/155 (37%), Positives = 81/155 (52%)
Frame = +3
Query: 33 APDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRT 212
APD Q + G R+ S + +GLN EQ AV+ + G V V AG G+GKTR
Sbjct: 12 APDHQPVAGGIAARARAAASVGAR--YLAGLNPEQRDAVETLD-GPVLVLAGAGTGKTRV 68
Query: 213 LVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARL 392
L R+ ++ RP +I +TFT KAA E++ RL + LG LGTFHS++ R+
Sbjct: 69 LTTRIAHILSQGRARPGEILSVTFTNKAAREMKTRLAEMLGQAVEGMPWLGTFHSIAGRI 128
Query: 393 LRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQ 497
LR H +LV L+ +F VL+ D+Q
Sbjct: 129 LRSHAELVQ-------------LKSNFTVLDVDDQ 150
[91][TOP]
>UniRef100_A4TZQ0 UvrD/REP helicase n=1 Tax=Magnetospirillum gryphiswaldense
RepID=A4TZQ0_9PROT
Length = 745
Score = 85.9 bits (211), Expect = 1e-15
Identities = 54/142 (38%), Positives = 78/142 (54%)
Frame = +3
Query: 72 RSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHS 251
R P P P GLN EQ AV + G V V +G G+GKTR L +R+ +++
Sbjct: 20 RRGGPAPVPADAPWLIGLNPEQHQAVT-TTEGPVLVLSGAGTGKTRVLTSRLAQILAGRR 78
Query: 252 VRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAG 431
+P QI +TFT KAA E++ R+ +G AE++ LGTFHSL R+LR+H + V
Sbjct: 79 AQPWQILAVTFTNKAAREMKNRVAHMVG-PVAEQLWLGTFHSLCVRILRRHAEAV----- 132
Query: 432 ASGGSRLAGLRKDFRVLEEDEQ 497
GL+ +F +L+ D+Q
Sbjct: 133 --------GLKSNFTILDADDQ 146
[92][TOP]
>UniRef100_C1MMK9 ATP-dependent DNA helicase n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MMK9_9CHLO
Length = 851
Score = 85.9 bits (211), Expect = 1e-15
Identities = 60/184 (32%), Positives = 85/184 (46%), Gaps = 20/184 (10%)
Frame = +3
Query: 18 SPARAAPDQQSGSSGKPHRSHDPPSSPPPPP------HHSGLNSEQLAAVKDVSAGLVTV 179
SP P Q + + P +P PP H G+N EQ AA+ A + V
Sbjct: 80 SPQIPIPPQHQTTPVRGPPPRQQPLTPTTPPQRGDQSHLEGMNDEQRAAILAPIAAPMKV 139
Query: 180 SAGPGSGKTRTLVARVLELVQVHSVRPKQ--------------IAVLTFTRKAADELRKR 317
AGPGSGKTR LV RV L+ V P Q I +TFT KAA E+++R
Sbjct: 140 LAGPGSGKTRVLVGRVTHLINELGVPPSQVRSIHWSPYDRVGVILCITFTNKAAKEMKER 199
Query: 318 LRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQ 497
L +G A+ + GTFHS++AR+LR+ ++ G DF + +E +
Sbjct: 200 LVANVGVENAKAITAGTFHSVAARMLRKDVHALEN----------YGRGNDFVIYDETDT 249
Query: 498 SAVI 509
A++
Sbjct: 250 KALL 253
[93][TOP]
>UniRef100_C8NN64 ATP-dependent helicase PcrA n=2 Tax=Corynebacterium efficiens
RepID=C8NN64_COREF
Length = 824
Score = 85.5 bits (210), Expect = 2e-15
Identities = 50/131 (38%), Positives = 76/131 (58%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+GLN +Q AAV+ + + L+ V AG GSGKT L R+ L++ V P+QI +TFT KA
Sbjct: 45 AGLNEQQKAAVEHIGSPLLIV-AGAGSGKTAVLTRRIAYLMRYRGVHPQQILAITFTNKA 103
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R+R+ D +G A+ + + TFHS+ R+LRQ QLV GL +F
Sbjct: 104 AAEMRERVADLVG-PVAQRMWVATFHSVCVRILRQQAQLVQ------------GLNTNFT 150
Query: 477 VLEEDEQSAVI 509
+ + D+ ++
Sbjct: 151 IYDSDDSRRLL 161
[94][TOP]
>UniRef100_Q1GF10 ATP-dependent DNA helicase, Rep family n=1 Tax=Ruegeria sp. TM1040
RepID=Q1GF10_SILST
Length = 814
Score = 85.5 bits (210), Expect = 2e-15
Identities = 50/132 (37%), Positives = 74/132 (56%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ GLN Q AV+ + G V + AG G+GKT+ L R++ L+ + R +I +T
Sbjct: 24 PMPYLDGLNPAQRDAVETLD-GPVLMLAGAGTGKTKALTTRIVHLLNTNKARTNEILAVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG A LGTFHS+ +LLR+H +LV GL
Sbjct: 83 FTNKAAREMKDRVGRMLGQPAEGMPWLGTFHSICVKLLRRHAELV-------------GL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[95][TOP]
>UniRef100_C5AP71 DNA-dependent ATPase I and helicase II n=1 Tax=Methylobacterium
extorquens AM1 RepID=C5AP71_METEA
Length = 795
Score = 85.5 bits (210), Expect = 2e-15
Identities = 51/134 (38%), Positives = 71/134 (52%)
Frame = +3
Query: 96 PPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAV 275
P + SGLN EQ AV + + G V V AG G+GKTR L R+ L+ RP I
Sbjct: 38 PEGASYLSGLNPEQRRAV-EATEGPVLVLAGAGTGKTRVLTTRIAHLIATGKARPYDILS 96
Query: 276 LTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLA 455
+TFT KAA E++ R+ +G LGTFH++ ++LR+H +LV
Sbjct: 97 VTFTNKAAREMKHRIGGLIGPAGEGMPWLGTFHAIGTKILRRHAELV------------- 143
Query: 456 GLRKDFRVLEEDEQ 497
GL+ DF +L D+Q
Sbjct: 144 GLKSDFTILGTDDQ 157
[96][TOP]
>UniRef100_B9JH20 DNA helicase II protein n=1 Tax=Agrobacterium radiobacter K84
RepID=B9JH20_AGRRK
Length = 828
Score = 85.5 bits (210), Expect = 2e-15
Identities = 57/161 (35%), Positives = 79/161 (49%)
Frame = +3
Query: 12 PDSPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGP 191
P PA AP S G R+ P + +GLN EQ AV+ + G V V AG
Sbjct: 20 PRRPA-PAPSPASVGGGIAARAMAARDGGRRPDYLTGLNPEQTEAVETLD-GPVLVLAGA 77
Query: 192 GSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTF 371
G+GKTR L R+ ++ + P QI +TFT KAA E+++R+ +G LGTF
Sbjct: 78 GTGKTRVLTTRIAHILSTNRAFPSQILAVTFTNKAAREMKERVALLVGGAVEGMPWLGTF 137
Query: 372 HSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDE 494
HS+ +LLR+H S L GL F +L+ D+
Sbjct: 138 HSIGVKLLRRH-------------SELVGLSSSFTILDTDD 165
[97][TOP]
>UniRef100_B8H5Z3 DNA helicase II n=2 Tax=Caulobacter vibrioides RepID=B8H5Z3_CAUCN
Length = 811
Score = 85.5 bits (210), Expect = 2e-15
Identities = 54/169 (31%), Positives = 88/169 (52%), Gaps = 3/169 (1%)
Frame = +3
Query: 12 PDSPARAAPDQQSGSSGKPHRSHDPPSSPPP---PPHHSGLNSEQLAAVKDVSAGLVTVS 182
PD+ + + G P S + PP P + GLN EQ AV + + G + V
Sbjct: 9 PDTDSPSPIGDFPGDLPSPRISDLARARPPAGAAPGYLDGLNPEQREAV-ETTEGPLLVL 67
Query: 183 AGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVL 362
AG G+GKTR L R+ ++ RP +I +TFT KAA E+R+R+ +G A L
Sbjct: 68 AGAGTGKTRVLTTRLAHILATGRARPWEILAVTFTNKAAREMRERITHIIGPEAEGLRWL 127
Query: 363 GTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQSAVI 509
GTFHS++A++LR+H +L+ GL+ ++ +++ D+ ++
Sbjct: 128 GTFHSVAAQILRRHAELI-------------GLKSNYTIIDTDDNERLL 163
[98][TOP]
>UniRef100_B1ZI90 UvrD/REP helicase n=1 Tax=Methylobacterium populi BJ001
RepID=B1ZI90_METPB
Length = 798
Score = 85.5 bits (210), Expect = 2e-15
Identities = 51/134 (38%), Positives = 71/134 (52%)
Frame = +3
Query: 96 PPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAV 275
P + SGLN EQ AV + + G V V AG G+GKTR L R+ L+ RP I
Sbjct: 38 PEGASYLSGLNPEQRRAV-EATEGPVLVLAGAGTGKTRVLTTRIAHLIATGKARPYDILS 96
Query: 276 LTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLA 455
+TFT KAA E++ R+ +G LGTFH++ ++LR+H +LV
Sbjct: 97 VTFTNKAAREMKHRIGGLIGPAGEGMPWLGTFHAIGTKILRRHAELV------------- 143
Query: 456 GLRKDFRVLEEDEQ 497
GL+ DF +L D+Q
Sbjct: 144 GLKSDFTILGTDDQ 157
[99][TOP]
>UniRef100_A9VZJ0 UvrD/REP helicase n=1 Tax=Methylobacterium extorquens PA1
RepID=A9VZJ0_METEP
Length = 795
Score = 85.5 bits (210), Expect = 2e-15
Identities = 51/134 (38%), Positives = 71/134 (52%)
Frame = +3
Query: 96 PPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAV 275
P + SGLN EQ AV + + G V V AG G+GKTR L R+ L+ RP I
Sbjct: 38 PEGASYLSGLNPEQRRAV-EATEGPVLVLAGAGTGKTRVLTTRIAHLIATGKARPYDILS 96
Query: 276 LTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLA 455
+TFT KAA E++ R+ +G LGTFH++ ++LR+H +LV
Sbjct: 97 VTFTNKAAREMKHRIGGLIGPAGEGMPWLGTFHAIGTKILRRHAELV------------- 143
Query: 456 GLRKDFRVLEEDEQ 497
GL+ DF +L D+Q
Sbjct: 144 GLKSDFTILGTDDQ 157
[100][TOP]
>UniRef100_A5UVF1 ATP-dependent DNA helicase, Rep family n=1 Tax=Roseiflexus sp. RS-1
RepID=A5UVF1_ROSS1
Length = 659
Score = 85.5 bits (210), Expect = 2e-15
Identities = 53/127 (41%), Positives = 66/127 (51%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN EQ AV G + V AG GSGKTR L R+ L+ H V P I LTFT KA
Sbjct: 10 ASLNPEQRTAVA-APPGPILVRAGAGSGKTRVLTLRIAYLIVEHGVSPSNILALTFTNKA 68
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R+RLRD G + + GTFHS+ A +LR+H R+ DF
Sbjct: 69 AREMRQRLRDMPG-VSIRGLTAGTFHSVCASVLREHI-----------AGRIGSYTADFT 116
Query: 477 VLEEDEQ 497
+ EDEQ
Sbjct: 117 IYAEDEQ 123
[101][TOP]
>UniRef100_Q0FZV3 DNA helicase II n=1 Tax=Fulvimarina pelagi HTCC2506
RepID=Q0FZV3_9RHIZ
Length = 849
Score = 85.5 bits (210), Expect = 2e-15
Identities = 51/135 (37%), Positives = 74/135 (54%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
P + GLN EQ AAV + + G V V AG G+GKTR L R+ ++ P QI +TF
Sbjct: 31 PNYLDGLNPEQRAAV-ETTEGPVLVLAGAGTGKTRVLTTRIAHILATGRAWPSQILAVTF 89
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA E++ R+ +G LGTFHS+ ++LR+H +LV GL+
Sbjct: 90 TNKAAREMKARIGLLVGGEVEGMPWLGTFHSIGVKILRKHAELV-------------GLK 136
Query: 465 KDFRVLEEDEQSAVI 509
+F +L+ D+Q +I
Sbjct: 137 SNFTILDTDDQIRLI 151
[102][TOP]
>UniRef100_C7C6W2 DNA-dependent ATPase I and helicase II n=1 Tax=Methylobacterium
extorquens DM4 RepID=C7C6W2_METED
Length = 795
Score = 85.5 bits (210), Expect = 2e-15
Identities = 51/134 (38%), Positives = 71/134 (52%)
Frame = +3
Query: 96 PPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAV 275
P + SGLN EQ AV + + G V V AG G+GKTR L R+ L+ RP I
Sbjct: 38 PEGASYLSGLNPEQRRAV-EATEGPVLVLAGAGTGKTRVLTTRIAHLIATGKARPYDILS 96
Query: 276 LTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLA 455
+TFT KAA E++ R+ +G LGTFH++ ++LR+H +LV
Sbjct: 97 VTFTNKAAREMKHRIGGLIGPAGEGMPWLGTFHAIGTKILRRHAELV------------- 143
Query: 456 GLRKDFRVLEEDEQ 497
GL+ DF +L D+Q
Sbjct: 144 GLKSDFTILGTDDQ 157
[103][TOP]
>UniRef100_B0PH91 Putative uncharacterized protein n=1 Tax=Anaerotruncus colihominis
DSM 17241 RepID=B0PH91_9FIRM
Length = 899
Score = 85.5 bits (210), Expect = 2e-15
Identities = 54/128 (42%), Positives = 71/128 (55%)
Frame = +3
Query: 15 DSPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPG 194
D+P +AA +GS+ H + ++ H GLN Q AV +TV AGPG
Sbjct: 435 DAPKKAA----TGSAALKHAAALAGAAA-----HYGLNERQWEAVS-AQGRQITVVAGPG 484
Query: 195 SGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFH 374
+GKTRTLV R+ L++ + P QI +TFT KAA EL RL LG A +V +GTFH
Sbjct: 485 TGKTRTLVYRIRRLIETGAAAPGQITAVTFTNKAAAELAGRLEQELGRRTARKVSVGTFH 544
Query: 375 SLSARLLR 398
L +LLR
Sbjct: 545 GLCMKLLR 552
[104][TOP]
>UniRef100_A4A1X2 ATP-dependent DNA helicase n=1 Tax=Blastopirellula marina DSM 3645
RepID=A4A1X2_9PLAN
Length = 701
Score = 85.5 bits (210), Expect = 2e-15
Identities = 52/112 (46%), Positives = 67/112 (59%), Gaps = 9/112 (8%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
SGLN QL AV +S G + V AG GSGKTR + R+ L++ H VRP +I +TFT KA
Sbjct: 39 SGLNQAQLDAVNTLS-GPMLVLAGAGSGKTRVVTFRIANLIK-HGVRPSRILAVTFTNKA 96
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQH---------FQLVDRG 425
A E+R+R LG A E+ V+ TFHS R+LR+H F + DRG
Sbjct: 97 AAEMRERALGLLGKKATEQPVVSTFHSHCVRVLRRHINRLGYPLKFAIYDRG 148
[105][TOP]
>UniRef100_Q21E60 ATP-dependent DNA helicase UvrD n=1 Tax=Saccharophagus degradans
2-40 RepID=Q21E60_SACD2
Length = 724
Score = 85.1 bits (209), Expect = 3e-15
Identities = 54/136 (39%), Positives = 75/136 (55%), Gaps = 4/136 (2%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN Q AV G + V AG GSGKTR LV R+ +QV + P QI +TFT KAA
Sbjct: 9 GLNEPQREAVS-APLGNILVLAGAGSGKTRVLVHRIAWHIQVEGLSPHQIMAVTFTNKAA 67
Query: 300 DELRKRL----RDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRK 467
E+R RL + LG + + +GTFH ++ RLL+ H+Q AGL +
Sbjct: 68 REMRSRLDEIMGERLGPSGVRSMWVGTFHGIAHRLLKAHWQ-------------EAGLPQ 114
Query: 468 DFRVLEEDEQSAVIIR 515
+F++L+ D+Q V+ R
Sbjct: 115 NFQILDSDDQLRVVKR 130
[106][TOP]
>UniRef100_B4F1Y1 DNA helicase II n=1 Tax=Proteus mirabilis HI4320 RepID=B4F1Y1_PROMH
Length = 718
Score = 85.1 bits (209), Expect = 3e-15
Identities = 55/132 (41%), Positives = 77/132 (58%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN +Q AV ++ V AG GSGKTR LV R+ L+ V P I +TFT KAA
Sbjct: 9 GLNDKQREAVAAPRVNML-VLAGAGSGKTRVLVHRIAWLLSVEQASPFSIMAVTFTNKAA 67
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R R+ D +G T+ + +GTFHSL+ RLLR H+ +D AGL +DF++
Sbjct: 68 AEMRHRIEDLIG-TSQGGMWIGTFHSLAHRLLRAHY--LD-----------AGLPQDFQI 113
Query: 480 LEEDEQSAVIIR 515
++ D+Q +I R
Sbjct: 114 IDSDDQYRLIRR 125
[107][TOP]
>UniRef100_B1XW87 UvrD/REP helicase n=1 Tax=Leptothrix cholodnii SP-6
RepID=B1XW87_LEPCP
Length = 687
Score = 85.1 bits (209), Expect = 3e-15
Identities = 51/131 (38%), Positives = 76/131 (58%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
S LN QL AV + + + V AG GSGKTR + ++ L+Q ++P QIA +TFT KA
Sbjct: 6 STLNPAQLEAVNHLHSPCL-VLAGAGSGKTRVITHKIARLLQA-GLKPDQIAAITFTNKA 63
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R+R R +GA AA+ +V+ TFHSL R+LR+ + + GL+ F
Sbjct: 64 AQEMRERARSLIGARAAKHLVIATFHSLGVRMLREDGECM-------------GLKPKFS 110
Query: 477 VLEEDEQSAVI 509
+L+ D+ V+
Sbjct: 111 ILDADDVLGVL 121
[108][TOP]
>UniRef100_A4FFV5 ATP-dependent DNA helicase n=1 Tax=Saccharopolyspora erythraea NRRL
2338 RepID=A4FFV5_SACEN
Length = 1044
Score = 85.1 bits (209), Expect = 3e-15
Identities = 63/176 (35%), Positives = 89/176 (50%), Gaps = 8/176 (4%)
Frame = +3
Query: 12 PDSPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHS-----GLNSEQLAAVKDVSAGLVT 176
P +P R AP + S + D P +P + + GL+ +Q AA AG +
Sbjct: 436 PPAPTRPAPVEPSAAEPA-----DEPETPAVQANAADGVLAGLDPDQRAAAS-AEAGPLL 489
Query: 177 VSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEV 356
+ AGPG+GKTRT+ R+ LV V ++ +TFTR+AA+E+ +RL G TAA E+
Sbjct: 490 IVAGPGTGKTRTVTHRIAHLVLERQVPARECLAITFTRRAAEEMTERLHALAGPTAA-EL 548
Query: 357 VLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEE---DEQSAVIIR 515
+ TFHS +LLR H AG S LA VL E DE++A +R
Sbjct: 549 TVATFHSFGLQLLRDHHD----KAGLSADFGLADASVQHEVLTEVAGDERAAKALR 600
[109][TOP]
>UniRef100_C7D8R1 DNA helicase II n=1 Tax=Thalassiobium sp. R2A62 RepID=C7D8R1_9RHOB
Length = 797
Score = 85.1 bits (209), Expect = 3e-15
Identities = 49/132 (37%), Positives = 76/132 (57%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ + LN Q AV+ + G V + AG G+GKT+ L +R++ L+ + RP +I +T
Sbjct: 26 PAPYLNDLNPAQREAVEALK-GPVLMLAGAGTGKTKALTSRIVHLMSTGNARPNEILAVT 84
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG T LGTFH++ +LLR+H +LV GL
Sbjct: 85 FTNKAAREMKIRVGRMLGETVEGMPWLGTFHAICVKLLRRHAELV-------------GL 131
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 132 KSNFTILDTDDQ 143
[110][TOP]
>UniRef100_C2LKM4 Excision endonuclease subunit UvrD n=1 Tax=Proteus mirabilis ATCC
29906 RepID=C2LKM4_PROMI
Length = 718
Score = 85.1 bits (209), Expect = 3e-15
Identities = 55/132 (41%), Positives = 77/132 (58%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN +Q AV ++ V AG GSGKTR LV R+ L+ V P I +TFT KAA
Sbjct: 9 GLNDKQREAVAAPRVNML-VLAGAGSGKTRVLVHRIAWLLSVEQASPFSIMAVTFTNKAA 67
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R R+ D +G T+ + +GTFHSL+ RLLR H+ +D AGL +DF++
Sbjct: 68 AEMRHRIEDLIG-TSQGGMWIGTFHSLAHRLLRAHY--LD-----------AGLPQDFQI 113
Query: 480 LEEDEQSAVIIR 515
++ D+Q +I R
Sbjct: 114 IDSDDQYRLIRR 125
[111][TOP]
>UniRef100_B9R1E0 UvrD/REP helicase domain protein n=1 Tax=Labrenzia alexandrii
DFL-11 RepID=B9R1E0_9RHOB
Length = 822
Score = 85.1 bits (209), Expect = 3e-15
Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 9/176 (5%)
Frame = +3
Query: 9 RPDSPARAAPDQQSGSSGKPHRSHDPP---------SSPPPPPHHSGLNSEQLAAVKDVS 161
R ++P AP + SSG P PP ++ P + +GLN EQ AV + +
Sbjct: 21 RAEAPP-VAPPPGASSSGAP-----PPGGGIAARAMAARRAPDYLTGLNPEQRLAV-ETT 73
Query: 162 AGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGAT 341
G + V AG G+GKTR L R+ ++ RP ++ +TFT KAA E+++R+ +G
Sbjct: 74 EGPLLVLAGAGTGKTRVLTTRIAHILASGLARPHEMLAVTFTNKAAREMKERIAVFVGGN 133
Query: 342 AAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQSAVI 509
LGTFHS+ ++LR+H +LV GL+ F +L+ D+Q +I
Sbjct: 134 VEGMAWLGTFHSICVKILRKHAELV-------------GLKSGFSILDTDDQIRLI 176
[112][TOP]
>UniRef100_A3WU93 UvrD/REP helicase n=1 Tax=Nitrobacter sp. Nb-311A
RepID=A3WU93_9BRAD
Length = 814
Score = 85.1 bits (209), Expect = 3e-15
Identities = 51/131 (38%), Positives = 73/131 (55%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
P + SGLN EQ AV+ + G V V AG G+GKTR L R+ ++ RP ++ +TF
Sbjct: 30 PRYLSGLNPEQREAVETLD-GPVLVLAGAGTGKTRVLTTRIAHILSQGRARPGEVLSVTF 88
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA E++ RL LG + LGTFHS++ R+LR H +LV L+
Sbjct: 89 TNKAAREMKHRLGQMLGQSVEGMPWLGTFHSIAGRILRVHAELVQ-------------LK 135
Query: 465 KDFRVLEEDEQ 497
+F +L+ D+Q
Sbjct: 136 SNFTILDVDDQ 146
[113][TOP]
>UniRef100_A3WBD0 DNA and RNA helicase n=1 Tax=Erythrobacter sp. NAP1
RepID=A3WBD0_9SPHN
Length = 771
Score = 85.1 bits (209), Expect = 3e-15
Identities = 55/148 (37%), Positives = 77/148 (52%)
Frame = +3
Query: 54 SSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLE 233
SS P D P PP+ LN Q AV + G V + AG G+GKT L +R+
Sbjct: 2 SSNLPLPPDDNVPDGPVPPYAQRLNPPQREAVL-TTEGPVLMLAGAGTGKTAALTSRLAH 60
Query: 234 LVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQL 413
LV P QI +TFT KAA E+R+R+ LG A LGTFHS+ A++LR+H +L
Sbjct: 61 LVATRRAWPSQILCVTFTNKAAREMRERVAGHLGPGAEGIPWLGTFHSICAKMLRRHAEL 120
Query: 414 VDRGAGASGGSRLAGLRKDFRVLEEDEQ 497
V GL +++ +++ D+Q
Sbjct: 121 V-------------GLEQNYTIIDTDDQ 135
[114][TOP]
>UniRef100_Q2UPT5 RIB40 DNA, SC005 n=1 Tax=Aspergillus oryzae RepID=Q2UPT5_ASPOR
Length = 998
Score = 85.1 bits (209), Expect = 3e-15
Identities = 53/132 (40%), Positives = 73/132 (55%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLNS Q AAV S ++ V A PGSGKT+TL ARV L+ H RP+ + TFT KA+
Sbjct: 7 GLNSAQRAAVSSPSP-ILQVLAPPGSGKTKTLTARVAYLLAHHGYRPQDVICCTFTIKAS 65
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R+RL +G +++LGTFHS+ R L + L+ GLRK F +
Sbjct: 66 REMRERLAKLVGDRVQSKLILGTFHSICRRYLVTYGYLI-------------GLRKGFGI 112
Query: 480 LEEDEQSAVIIR 515
+ + A+I R
Sbjct: 113 ADSGDSLAIIRR 124
[115][TOP]
>UniRef100_Q4K3G3 DNA helicase II n=1 Tax=Pseudomonas fluorescens Pf-5
RepID=Q4K3G3_PSEF5
Length = 727
Score = 84.7 bits (208), Expect = 3e-15
Identities = 55/133 (41%), Positives = 73/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV S G V AG GSGKTR LV R+ L+QV + P I +TFT KA
Sbjct: 10 NSLNDAQRQAVA-ASVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSILSVTFTNKA 68
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R R+ LG A + +GTFH L+ RLLR H+Q AGL + F+
Sbjct: 69 AAEMRHRIEQLLGINPA-GMWVGTFHGLAHRLLRAHWQ-------------EAGLSQTFQ 114
Query: 477 VLEEDEQSAVIIR 515
+L+ D+Q ++ R
Sbjct: 115 ILDSDDQQRLVKR 127
[116][TOP]
>UniRef100_B8GBH8 UvrD/REP helicase n=1 Tax=Chloroflexus aggregans DSM 9485
RepID=B8GBH8_CHLAD
Length = 742
Score = 84.7 bits (208), Expect = 3e-15
Identities = 53/133 (39%), Positives = 73/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN +Q AV V+ G V V AGPGSGKTR L R+ L+ V P QI +TFT KA
Sbjct: 8 ANLNPQQQRAVTTVT-GPVLVLAGPGSGKTRVLTHRIAYLIDEVGVDPLQILAVTFTNKA 66
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R+RL LG A ++ +GTFHS+ AR LR+ + G +DF
Sbjct: 67 AREMRERLMALLGEAIAHDLTVGTFHSICARWLRRDIVHL-------------GRERDFV 113
Query: 477 VLEEDEQSAVIIR 515
+ + D+Q ++ R
Sbjct: 114 IYDTDDQERLLKR 126
[117][TOP]
>UniRef100_B6JB56 DNA helicase II n=1 Tax=Oligotropha carboxidovorans OM5
RepID=B6JB56_OLICO
Length = 857
Score = 84.7 bits (208), Expect = 3e-15
Identities = 56/159 (35%), Positives = 82/159 (51%)
Frame = +3
Query: 21 PARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSG 200
P P Q + G R+ + P + + LN EQ AV+ + G V V AG G+G
Sbjct: 8 PVADVPAHQPAAGGIAARAR----AAAAPQYLTALNPEQREAVETLD-GPVLVLAGAGTG 62
Query: 201 KTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSL 380
KTR L +R+ ++ RP +I +TFT KAA E+++RL LG T LGTFH++
Sbjct: 63 KTRVLTSRIAHILSEGRARPSEILSVTFTNKAAREMKQRLGVMLGQTVEGMPWLGTFHAI 122
Query: 381 SARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQ 497
+ R+LR H + LA L+ +F VL+ D+Q
Sbjct: 123 AGRILRVH-------------AELAQLKSNFTVLDVDDQ 148
[118][TOP]
>UniRef100_A9D3D2 Putative ATP-dependent DNA helicase n=1 Tax=Hoeflea phototrophica
DFL-43 RepID=A9D3D2_9RHIZ
Length = 840
Score = 84.7 bits (208), Expect = 3e-15
Identities = 50/132 (37%), Positives = 72/132 (54%)
Frame = +3
Query: 99 PPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVL 278
P + +GLN EQ AV+ + G V V AG G+GKTR L R+ ++ + P QI +
Sbjct: 51 PAASYLAGLNPEQADAVESIE-GPVLVLAGAGTGKTRVLTTRIAHILNLGLAFPSQILSV 109
Query: 279 TFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAG 458
TFT KAA E+++R+ +G LGTFHS+ +LLR+H + LA
Sbjct: 110 TFTNKAAREMKERIGVLVGGAVEGMPWLGTFHSIGVKLLRRH-------------AELAN 156
Query: 459 LRKDFRVLEEDE 494
LR DF +L+ D+
Sbjct: 157 LRSDFTILDTDD 168
[119][TOP]
>UniRef100_A3X8V2 DNA helicase II, putative n=1 Tax=Roseobacter sp. MED193
RepID=A3X8V2_9RHOB
Length = 832
Score = 84.7 bits (208), Expect = 3e-15
Identities = 47/110 (42%), Positives = 67/110 (60%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ GLN Q AV+ + G V + AG G+GKT+ L AR++ L+ S R +I +T
Sbjct: 24 PTPYLDGLNPAQREAVECLE-GPVLMLAGAGTGKTKALTARIVHLLNTGSARTNEILAVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAG 431
FT KAA E+++R+ LG A LGTFHS+ +LLR+H +L+ AG
Sbjct: 83 FTNKAAREMKERVGSMLGQPAEGMPWLGTFHSVCVKLLRRHAELISGEAG 132
[120][TOP]
>UniRef100_C7YM68 Putative uncharacterized protein n=1 Tax=Nectria haematococca mpVI
77-13-4 RepID=C7YM68_NECH7
Length = 1057
Score = 84.7 bits (208), Expect = 3e-15
Identities = 54/131 (41%), Positives = 74/131 (56%)
Frame = +3
Query: 123 LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAAD 302
LN Q AV SA V + AGPGSGKT TL +RV+ LVQ RP + V TFT KAA
Sbjct: 14 LNQAQRRAVTS-SASTVAILAGPGSGKTHTLTSRVVWLVQRVGYRPSDVIVATFTVKAAR 72
Query: 303 ELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVL 482
E++ R+ ALG +++VLGTFHS++ R L + G+R+ GL F +
Sbjct: 73 EMKDRIGKALGEECEKKIVLGTFHSIARRYLSIY------------GNRI-GLDSKFGIA 119
Query: 483 EEDEQSAVIIR 515
++ + A+I R
Sbjct: 120 DDGDSKAIIQR 130
[121][TOP]
>UniRef100_B6HBW4 Pc18g04920 protein n=1 Tax=Penicillium chrysogenum Wisconsin
54-1255 RepID=B6HBW4_PENCW
Length = 995
Score = 84.7 bits (208), Expect = 3e-15
Identities = 52/136 (38%), Positives = 73/136 (53%)
Frame = +3
Query: 108 PHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFT 287
P GLN Q AV S ++ V A PGSGKT+TL ARV L+ H +P+ + TFT
Sbjct: 3 PILDGLNHAQREAVTS-SGSILQVLAPPGSGKTKTLTARVAYLLSHHKYQPQDVICCTFT 61
Query: 288 RKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRK 467
KA+ E+R+RL +G ++LGTFHS+ R L ++ L+ GLRK
Sbjct: 62 IKASREMRERLAKLIGEKLESRLILGTFHSICRRYLVKYGYLI-------------GLRK 108
Query: 468 DFRVLEEDEQSAVIIR 515
F + + D+ A+I R
Sbjct: 109 GFGIADSDDTRAIIRR 124
[122][TOP]
>UniRef100_B3LQ21 DNA helicase n=4 Tax=Saccharomyces cerevisiae RepID=B3LQ21_YEAS1
Length = 1174
Score = 84.7 bits (208), Expect = 3e-15
Identities = 50/134 (37%), Positives = 81/134 (60%), Gaps = 3/134 (2%)
Frame = +3
Query: 117 SGLNSEQ-LAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRK 293
S LN++Q AA+ D + GL + AGPG+GKT+ L +RV L+ H + P+ I V TFT K
Sbjct: 13 SQLNTQQRAAALFDYTRGLQVI-AGPGTGKTKVLTSRVAYLILHHHIHPRDIIVTTFTNK 71
Query: 294 AADELRKRLRDALGATAA--EEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRK 467
AA+E+++RL++ L E+++GTFHS+ ++L + LVD L+K
Sbjct: 72 AANEMKERLQEMLRGAGVNISELLIGTFHSICLKILYRFGHLVD-------------LQK 118
Query: 468 DFRVLEEDEQSAVI 509
D+R+++E E ++
Sbjct: 119 DWRIIDEKEIDVIL 132
[123][TOP]
>UniRef100_A6ZPN3 DNA helicase n=1 Tax=Saccharomyces cerevisiae YJM789
RepID=A6ZPN3_YEAS7
Length = 1174
Score = 84.7 bits (208), Expect = 3e-15
Identities = 50/134 (37%), Positives = 81/134 (60%), Gaps = 3/134 (2%)
Frame = +3
Query: 117 SGLNSEQ-LAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRK 293
S LN++Q AA+ D + GL + AGPG+GKT+ L +RV L+ H + P+ I V TFT K
Sbjct: 13 SQLNTQQRAAALFDYTRGLQVI-AGPGTGKTKVLTSRVAYLILHHHIHPRDIIVTTFTNK 71
Query: 294 AADELRKRLRDALGATAA--EEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRK 467
AA+E+++RL++ L E+++GTFHS+ ++L + LVD L+K
Sbjct: 72 AANEMKERLQEMLRGAGVNISELLIGTFHSICLKILYRFGHLVD-------------LQK 118
Query: 468 DFRVLEEDEQSAVI 509
D+R+++E E ++
Sbjct: 119 DWRIIDEKEIDVIL 132
[124][TOP]
>UniRef100_A2QP78 Contig An07c0280, complete genome n=1 Tax=Aspergillus niger CBS
513.88 RepID=A2QP78_ASPNC
Length = 1003
Score = 84.7 bits (208), Expect = 3e-15
Identities = 53/136 (38%), Positives = 75/136 (55%)
Frame = +3
Query: 108 PHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFT 287
P GLNS Q AAV A ++ V A PGSGKT+TL ARV L+ H RP+ + TFT
Sbjct: 3 PILDGLNSAQTAAVAS-PAPILQVLAPPGSGKTKTLTARVAYLLAHHGYRPQDVICCTFT 61
Query: 288 RKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRK 467
KA+ E+R+RL +G ++++LGTFHS+ R L + L+ GL+K
Sbjct: 62 IKASREMRERLAKLIGDELQKKLILGTFHSICRRYLVTYGYLI-------------GLKK 108
Query: 468 DFRVLEEDEQSAVIIR 515
F + + + A+I R
Sbjct: 109 GFGIADSGDSLAIIKR 124
[125][TOP]
>UniRef100_P12954 ATP-dependent DNA helicase SRS2 n=1 Tax=Saccharomyces cerevisiae
RepID=SRS2_YEAST
Length = 1174
Score = 84.7 bits (208), Expect = 3e-15
Identities = 50/134 (37%), Positives = 81/134 (60%), Gaps = 3/134 (2%)
Frame = +3
Query: 117 SGLNSEQ-LAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRK 293
S LN++Q AA+ D + GL + AGPG+GKT+ L +RV L+ H + P+ I V TFT K
Sbjct: 13 SQLNTQQRAAALFDYTRGLQVI-AGPGTGKTKVLTSRVAYLILHHHIHPRDIIVTTFTNK 71
Query: 294 AADELRKRLRDALGATAA--EEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRK 467
AA+E+++RL++ L E+++GTFHS+ ++L + LVD L+K
Sbjct: 72 AANEMKERLQEMLRGAGVNISELLIGTFHSICLKILYRFGHLVD-------------LQK 118
Query: 468 DFRVLEEDEQSAVI 509
D+R+++E E ++
Sbjct: 119 DWRIIDEKEIDVIL 132
[126][TOP]
>UniRef100_Q0BY27 Putative DNA helicase II n=1 Tax=Hyphomonas neptunium ATCC 15444
RepID=Q0BY27_HYPNA
Length = 781
Score = 84.3 bits (207), Expect = 4e-15
Identities = 55/142 (38%), Positives = 76/142 (53%), Gaps = 6/142 (4%)
Frame = +3
Query: 90 SSPPPPP------HHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHS 251
S+ PP P + +GLN EQ AV L+ V AG G+GKTR L +R+ +V
Sbjct: 18 SARPPVPTGDGAAYLNGLNPEQRDAVLHTEGPLL-VLAGAGTGKTRVLTSRLAHIVATRL 76
Query: 252 VRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAG 431
P Q +TFT KAA E+R+R + LG LGTFHS+SA++LR+H +LV
Sbjct: 77 AYPSQTLTVTFTNKAAREMRERAQALLGDAGEGLRWLGTFHSISAQILRKHAELV----- 131
Query: 432 ASGGSRLAGLRKDFRVLEEDEQ 497
GL+ F +L+ D+Q
Sbjct: 132 --------GLKSSFTILDTDDQ 145
[127][TOP]
>UniRef100_C0Z4D5 ATP-dependent DNA helicase n=1 Tax=Brevibacillus brevis NBRC 100599
RepID=C0Z4D5_BREBN
Length = 782
Score = 84.3 bits (207), Expect = 4e-15
Identities = 50/134 (37%), Positives = 74/134 (55%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+GLN EQ AV + G V + AG GSGKT+ L R+ L+ V P I +TFT KA
Sbjct: 9 AGLNPEQREAVL-TTEGPVLILAGAGSGKTKVLTQRIAYLISAKQVAPWSILAITFTNKA 67
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E++ R+ +G AA++ L TFHSL R+LR+ +DR G+ + F
Sbjct: 68 AREMQNRVAAIIGGAAAQDAWLSTFHSLCVRILRRD---IDR----------LGINRSFS 114
Query: 477 VLEEDEQSAVIIRC 518
+L+ +Q +V+ +C
Sbjct: 115 ILDAGDQLSVVKQC 128
[128][TOP]
>UniRef100_B9JXR6 DNA helicase II n=1 Tax=Agrobacterium vitis S4 RepID=B9JXR6_AGRVS
Length = 858
Score = 84.3 bits (207), Expect = 4e-15
Identities = 55/155 (35%), Positives = 78/155 (50%)
Frame = +3
Query: 30 AAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTR 209
AA + G G R+ P + +GLN EQ AV+ + G V V AG G+GKTR
Sbjct: 51 AASTKAGGGLGIAARAMAARDQNRNPDYLAGLNPEQREAVETLD-GPVLVLAGAGTGKTR 109
Query: 210 TLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSAR 389
L R+ ++ P QI +TFT KAA E+++R+ +G LGTFHS+ +
Sbjct: 110 VLTTRIAHILATGRAFPSQILSVTFTNKAAREMKERVGVLVGGAVEGMPWLGTFHSIGVK 169
Query: 390 LLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDE 494
LLR+H +LV GL DF +L+ D+
Sbjct: 170 LLRRHAELV-------------GLTSDFTILDTDD 191
[129][TOP]
>UniRef100_A9GRW6 ATP-dependent DNA helicase n=1 Tax=Sorangium cellulosum 'So ce 56'
RepID=A9GRW6_SORC5
Length = 1089
Score = 84.3 bits (207), Expect = 4e-15
Identities = 59/147 (40%), Positives = 82/147 (55%), Gaps = 7/147 (4%)
Frame = +3
Query: 18 SPARAAPDQQSG---SSGKPHRSHDPPSSPPPPPHHSG----LNSEQLAAVKDVSAGLVT 176
+PA P + G ++ +P + + PP P + L+ EQ AA +++ G +
Sbjct: 442 APAAPCPPPRRGRADAAPRPAPAGEVSRGAPPAPGGAAPLDALDPEQRAAA-EITDGALL 500
Query: 177 VSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEV 356
+ AGPG+GKTRTL R+ LV V P+Q +TFTR+AADELR+RL LG A V
Sbjct: 501 LLAGPGTGKTRTLTHRIAHLVLDLGVPPEQCLAITFTRRAADELRERLGALLG-EAGGRV 559
Query: 357 VLGTFHSLSARLLRQHFQLVDRGAGAS 437
TFH+L LLR+H Q GAGA+
Sbjct: 560 PAMTFHALGLSLLREHAQ----GAGAA 582
[130][TOP]
>UniRef100_C8S459 UvrD/REP helicase n=1 Tax=Rhodobacter sp. SW2 RepID=C8S459_9RHOB
Length = 850
Score = 84.3 bits (207), Expect = 4e-15
Identities = 51/132 (38%), Positives = 74/132 (56%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ LN EQ AAV G V + AG G+GKT+ L AR++ L+ RP +I +T
Sbjct: 25 PAPYLDDLNPEQRAAVL-APDGPVLMLAGAGTGKTKALTARIVHLLTTGKARPNEILAVT 83
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG +GTFHS+S ++LR+H +LV GL
Sbjct: 84 FTNKAAREMKDRVGRMLGQVEGMP-WMGTFHSISVKILRRHAELV-------------GL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[131][TOP]
>UniRef100_A3UE97 DNA helicase II n=1 Tax=Oceanicaulis alexandrii HTCC2633
RepID=A3UE97_9RHOB
Length = 766
Score = 84.3 bits (207), Expect = 4e-15
Identities = 50/126 (39%), Positives = 72/126 (57%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN EQ AAV+ V G V V AG G+GKTR L R+ ++ +P I +TFT KAA
Sbjct: 24 GLNPEQRAAVEAVD-GAVLVLAGAGTGKTRVLTTRLAHILATGKAQPWNILAVTFTNKAA 82
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+++R+ +G LGTFHS++A++LR+H +LV GL+ F +
Sbjct: 83 REMKERVGKIIGEQVEGLPWLGTFHSIAAQILRRHAELV-------------GLKSTFTI 129
Query: 480 LEEDEQ 497
L+ D+Q
Sbjct: 130 LDTDDQ 135
[132][TOP]
>UniRef100_A3JZN7 DNA helicase II, putative n=1 Tax=Sagittula stellata E-37
RepID=A3JZN7_9RHOB
Length = 827
Score = 84.3 bits (207), Expect = 4e-15
Identities = 50/132 (37%), Positives = 73/132 (55%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ LN Q AV+ + G V + AG G+GKT+ L ARV+ L+ RP +I +T
Sbjct: 24 PNPYLDELNPAQREAVEHLD-GPVLMLAGAGTGKTKALTARVVHLLNTGRARPNEILSVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG +GTFHS+ +LLR+H +LV GL
Sbjct: 83 FTNKAAREMKTRVGKVLGQVVEGMPWMGTFHSICVKLLRRHAELV-------------GL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[133][TOP]
>UniRef100_Q0CRN6 Putative uncharacterized protein n=1 Tax=Aspergillus terreus
NIH2624 RepID=Q0CRN6_ASPTN
Length = 981
Score = 84.3 bits (207), Expect = 4e-15
Identities = 54/145 (37%), Positives = 75/145 (51%), Gaps = 2/145 (1%)
Frame = +3
Query: 87 PSSPPPP--PHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRP 260
P PP P P GLN Q AV A ++ V A PGSGKT+TL ARV L+ H +P
Sbjct: 4 PKQPPNPMDPIIEGLNYAQRDAVTS-PASILQVLAPPGSGKTKTLTARVAYLLSHHGYQP 62
Query: 261 KQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASG 440
+ + TFT KA+ E+R+RL +G ++LGTFHS+ R L + L+
Sbjct: 63 QDVICCTFTIKASREMRERLAKLVGDDVQSRLILGTFHSICRRYLVSYGYLI-------- 114
Query: 441 GSRLAGLRKDFRVLEEDEQSAVIIR 515
GLR+ F + + + A+I R
Sbjct: 115 -----GLRRGFGIADSSDSLAIIKR 134
[134][TOP]
>UniRef100_Q5FNC6 DNA helicase II n=1 Tax=Gluconobacter oxydans RepID=Q5FNC6_GLUOX
Length = 740
Score = 84.0 bits (206), Expect = 6e-15
Identities = 53/139 (38%), Positives = 75/139 (53%), Gaps = 1/139 (0%)
Frame = +3
Query: 84 PPSSPPPPPHH-SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRP 260
P P P P + S LN EQ A+ + + G + + AG G+GKTR L R ++ P
Sbjct: 2 PQDLPSPTPEYLSRLNPEQRRAI-ETTEGPLLILAGAGTGKTRVLTTRFAHILLTGRAYP 60
Query: 261 KQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASG 440
QI +TFT KAA E+R+R+ LG AE + LGTFH++ AR+LR+H + V
Sbjct: 61 SQILAVTFTNKAAREMRERVSAILG-EPAEGLWLGTFHAICARMLRRHAEYV-------- 111
Query: 441 GSRLAGLRKDFRVLEEDEQ 497
GL F +L+ D+Q
Sbjct: 112 -----GLTSSFNILDTDDQ 125
[135][TOP]
>UniRef100_B3QYS3 UvrD/REP helicase n=1 Tax=Chloroherpeton thalassium ATCC 35110
RepID=B3QYS3_CHLT3
Length = 765
Score = 84.0 bits (206), Expect = 6e-15
Identities = 50/129 (38%), Positives = 71/129 (55%)
Frame = +3
Query: 123 LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAAD 302
LN+EQ AV + + G V + AG GSGKTR + R+ ++ + P QI LTFT KAA+
Sbjct: 22 LNTEQKKAV-ETTKGPVMIIAGAGSGKTRVITFRIAYIINKENCAPNQILALTFTNKAAN 80
Query: 303 ELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVL 482
E+R R+ + LG + + +GTFHS ARLLRQH DR G D+ +
Sbjct: 81 EMRSRVEEILGTGSTRGLWIGTFHSNFARLLRQH---ADR----------LGFTSDYTIY 127
Query: 483 EEDEQSAVI 509
+ D+ +I
Sbjct: 128 DADDSKNLI 136
[136][TOP]
>UniRef100_B2GM51 ATP-dependent DNA helicase UvrD1 n=1 Tax=Kocuria rhizophila DC2201
RepID=B2GM51_KOCRD
Length = 818
Score = 84.0 bits (206), Expect = 6e-15
Identities = 52/129 (40%), Positives = 75/129 (58%)
Frame = +3
Query: 15 DSPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPG 194
D+P +A +S ++G PH D +SP +GLN Q AAV+ A L+ V AG G
Sbjct: 6 DNPLLSAASVRSSTAGAPHEPSDAVASPEQLV--AGLNEPQRAAVEHSGAPLLIV-AGAG 62
Query: 195 SGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFH 374
SGKTR L R+ L+ R +I +TFT KAA E+R+R+ + +G +A + + TFH
Sbjct: 63 SGKTRVLTHRIAHLLATGRARRGEILAITFTNKAAAEMRERIAELVG-DSARTMWISTFH 121
Query: 375 SLSARLLRQ 401
SL R+LR+
Sbjct: 122 SLCVRILRR 130
[137][TOP]
>UniRef100_A9W9P7 UvrD/REP helicase n=2 Tax=Chloroflexus RepID=A9W9P7_CHLAA
Length = 746
Score = 84.0 bits (206), Expect = 6e-15
Identities = 51/133 (38%), Positives = 72/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV V+ G V V AGPGSGKTR L R+ L+ + P QI +TFT KA
Sbjct: 7 ANLNEPQQRAVTTVT-GPVLVLAGPGSGKTRVLTHRIAYLIAETGIDPLQILAVTFTNKA 65
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R+RL +G T A E+ +GTFH++ R LR+ + G +DF
Sbjct: 66 AREIRERLNLLVGETVAHEITIGTFHAICTRWLRRDIVHL-------------GRERDFV 112
Query: 477 VLEEDEQSAVIIR 515
+ + D+Q ++ R
Sbjct: 113 IYDSDDQERLMKR 125
[138][TOP]
>UniRef100_A8RMK4 Putative uncharacterized protein n=1 Tax=Clostridium bolteae ATCC
BAA-613 RepID=A8RMK4_9CLOT
Length = 1094
Score = 84.0 bits (206), Expect = 6e-15
Identities = 58/150 (38%), Positives = 79/150 (52%), Gaps = 16/150 (10%)
Frame = +3
Query: 24 ARAAPDQQSGSSGKPHRSHDPPSSPPPPPH------------HSGLNSEQLAAVKDVSAG 167
A A P + SGK SH +S S LN +Q AV+ V
Sbjct: 452 ADAVPSANTALSGKAGVSHGSTASREASYETAVSNILTVSNPSSALNRDQQQAVESVFP- 510
Query: 168 LVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDAL-GATA 344
+ V AGPG+GKT+TLV+R+ L+ V+P +I +TFT KAADEL +R+R AL G +
Sbjct: 511 VTAVIAGPGTGKTKTLVSRIEHLMGERGVKPSEITAVTFTNKAADELTQRIRQALPGRRS 570
Query: 345 AEEVVLGTFHSLSARLLRQ---HFQLVDRG 425
++ +GTFHSL RLL + L D+G
Sbjct: 571 LNQMQVGTFHSLCYRLLARSGTELSLADQG 600
[139][TOP]
>UniRef100_Q211W5 ATP-dependent DNA helicase, Rep family n=1 Tax=Rhodopseudomonas
palustris BisB18 RepID=Q211W5_RHOPB
Length = 866
Score = 83.6 bits (205), Expect = 7e-15
Identities = 52/131 (39%), Positives = 71/131 (54%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
P + +GLN EQ AV+ + G V V AG G+GKTR L +R+ ++ RP +I +TF
Sbjct: 33 PAYLAGLNPEQSDAVQTLD-GPVLVLAGAGTGKTRVLTSRIAHILSSGRARPGEILSVTF 91
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA E++ RL LG LGTFHS+ R+LR H +LV L
Sbjct: 92 TNKAAREMKLRLGQMLGQAVEGMPWLGTFHSIGGRILRYHAELVQ-------------LT 138
Query: 465 KDFRVLEEDEQ 497
+F VL+ D+Q
Sbjct: 139 SNFTVLDTDDQ 149
[140][TOP]
>UniRef100_C1DFZ2 DNA helicase II, UvrD n=1 Tax=Azotobacter vinelandii DJ
RepID=C1DFZ2_AZOVD
Length = 726
Score = 83.6 bits (205), Expect = 7e-15
Identities = 54/133 (40%), Positives = 75/133 (56%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
S LN+ Q AV G V AG GSGKTR LV R+ L++V + P I +TFT KA
Sbjct: 10 SALNAAQRQAVT-APLGPRLVLAGAGSGKTRVLVHRIAWLIEVENASPHAILAVTFTNKA 68
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R R+ LG T+ + +GTFH L+ RLLR H+Q AGL ++F+
Sbjct: 69 AAEMRTRIEQLLG-TSPMGMWIGTFHGLAHRLLRAHWQ-------------EAGLAENFQ 114
Query: 477 VLEEDEQSAVIIR 515
+L+ D+Q ++ R
Sbjct: 115 ILDADDQQRLVKR 127
[141][TOP]
>UniRef100_A5EWK9 DNA helicase II n=1 Tax=Dichelobacter nodosus VCS1703A
RepID=A5EWK9_DICNV
Length = 712
Score = 83.6 bits (205), Expect = 7e-15
Identities = 55/133 (41%), Positives = 75/133 (56%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
SGLN+ Q AV +V V AG GSGKTR LV R+ L+ V P Q+ LTFT KA
Sbjct: 8 SGLNAAQRDAVT-TKERIVRVIAGAGSGKTRVLVQRMQWLMTVAGCMPYQLLALTFTNKA 66
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R+RL + A + ++ +GTFHS+ R+LRQ+ +LV G K F
Sbjct: 67 AQEMRQRLEQS-AACSLNQLWMGTFHSICLRILRQYAELV-------------GWEKSFI 112
Query: 477 VLEEDEQSAVIIR 515
V++ D+Q +I R
Sbjct: 113 VIDSDDQLRLIKR 125
[142][TOP]
>UniRef100_B9NMZ6 UvrD/REP helicase domain protein n=1 Tax=Rhodobacteraceae bacterium
KLH11 RepID=B9NMZ6_9RHOB
Length = 837
Score = 83.6 bits (205), Expect = 7e-15
Identities = 49/129 (37%), Positives = 75/129 (58%)
Frame = +3
Query: 123 LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAAD 302
LN Q AV+ + G V + AG G+GKT+ L AR+ L++ H VR +I +TFT KAA
Sbjct: 31 LNPAQREAVERLE-GPVLMLAGAGTGKTKALTARITHLLRSHRVRENEILAVTFTNKAAR 89
Query: 303 ELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVL 482
E+++R+ LG A LGTFH++ +LLR+H +LV GL+ +F +L
Sbjct: 90 EMKERVGRMLGRPAEGMPWLGTFHAICVKLLRRHAELV-------------GLKSNFTIL 136
Query: 483 EEDEQSAVI 509
+ D+Q ++
Sbjct: 137 DTDDQKRLL 145
[143][TOP]
>UniRef100_B6BAZ7 UvrD/REP helicase domain protein n=1 Tax=Rhodobacterales bacterium
Y4I RepID=B6BAZ7_9RHOB
Length = 789
Score = 83.6 bits (205), Expect = 7e-15
Identities = 49/132 (37%), Positives = 73/132 (55%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ LN Q AV+ + G V + AG G+GKT+ L R++ L+ RP +I +T
Sbjct: 24 PMPYLDSLNPAQREAVECLD-GPVLMLAGAGTGKTKALTTRIVHLLSTGRARPNEILSVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E+++R+ LG LGTFHS+ +LLR+H + LAGL
Sbjct: 83 FTNKAAREMKERVGALLGQAVEGMPWLGTFHSICVKLLRRH-------------AELAGL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[144][TOP]
>UniRef100_B2Q4N4 Putative uncharacterized protein n=1 Tax=Providencia stuartii ATCC
25827 RepID=B2Q4N4_PROST
Length = 723
Score = 83.6 bits (205), Expect = 7e-15
Identities = 55/132 (41%), Positives = 76/132 (57%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN +Q AV L+ V AG GSGKTR LV R+ L+ V P I +TFT KAA
Sbjct: 12 GLNDKQREAVAAPRTNLL-VLAGAGSGKTRVLVHRIAWLMAVEHASPFSIMAVTFTNKAA 70
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R R+ +G++ + +GTFH L+ RLLRQH+ +D AGL +DF++
Sbjct: 71 AEMRHRINQLIGSSEG-GMWIGTFHGLAHRLLRQHY--LD-----------AGLPQDFQI 116
Query: 480 LEEDEQSAVIIR 515
L+ D+Q +I R
Sbjct: 117 LDSDDQYRLIRR 128
[145][TOP]
>UniRef100_A3WKF3 Superfamily I DNA helicase, UvrD n=1 Tax=Idiomarina baltica OS145
RepID=A3WKF3_9GAMM
Length = 724
Score = 83.6 bits (205), Expect = 7e-15
Identities = 53/136 (38%), Positives = 75/136 (55%)
Frame = +3
Query: 108 PHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFT 287
P SGLN +Q AV ++ V AG GSGKTR LV R+ L+Q P I +TFT
Sbjct: 5 PLISGLNEKQATAVSADDRPML-VLAGAGSGKTRVLVHRIAWLIQERRYSPYSILAVTFT 63
Query: 288 RKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRK 467
KAA E+R R+ LG ++ + +GTFH L+ RLLR H+ V GL +
Sbjct: 64 NKAASEMRGRVEQLLG-SSVRNMWIGTFHGLAHRLLRAHYMDV-------------GLPQ 109
Query: 468 DFRVLEEDEQSAVIIR 515
+F++L+ D+Q ++ R
Sbjct: 110 NFQILDSDDQQRLVKR 125
[146][TOP]
>UniRef100_UPI0001BB05A5 UvrD/REP helicase n=1 Tax=Haliangium ochraceum DSM 14365
RepID=UPI0001BB05A5
Length = 1161
Score = 83.2 bits (204), Expect = 1e-14
Identities = 64/174 (36%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Frame = +3
Query: 21 PARAAPDQQSGSSGKPHRSHDPPSSPPPPPHH-----------SGLNSEQLAAVKDVSAG 167
P A+P + + G PPS P P S L+ EQ A + V
Sbjct: 454 PVPASPASVASAPGTAAEFDPPPSEIPRPSPETLRDGAASSLLSALDPEQRRAAECVHGP 513
Query: 168 LVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAA 347
L+ V AGPG+GKTRTL R+ LV+ V P +TFT +AA ELR+RL DAL A
Sbjct: 514 LLIV-AGPGTGKTRTLTHRIAHLVEDIGVEPAACLAITFTNRAAGELRERL-DALLPGAG 571
Query: 348 EEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQSAVI 509
V + TFHSL+ R+LR++ AGL + FRV E E A++
Sbjct: 572 AGVAVHTFHSLALRILREN-------------RVRAGLHRGFRVAAESECVALL 612
[147][TOP]
>UniRef100_UPI000197CAA6 hypothetical protein PROVRETT_00260 n=1 Tax=Providencia rettgeri
DSM 1131 RepID=UPI000197CAA6
Length = 723
Score = 83.2 bits (204), Expect = 1e-14
Identities = 54/132 (40%), Positives = 74/132 (56%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN +Q AV L+ V AG GSGKTR LV R+ L+ V + P I +TFT KAA
Sbjct: 12 GLNDKQREAVAAPRTNLL-VLAGAGSGKTRVLVHRIAWLMSVENASPFSIMAVTFTNKAA 70
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R R+ +G T+ + +GTFH L+ RLLRQH+ A L +DF++
Sbjct: 71 AEMRHRINQLIG-TSEGGMWIGTFHGLAHRLLRQHYM-------------DANLPQDFQI 116
Query: 480 LEEDEQSAVIIR 515
L+ D+Q +I R
Sbjct: 117 LDSDDQYRLIRR 128
[148][TOP]
>UniRef100_Q1DC55 ATP-dependent DNA helicase PcrA n=1 Tax=Myxococcus xanthus DK 1622
RepID=Q1DC55_MYXXD
Length = 783
Score = 83.2 bits (204), Expect = 1e-14
Identities = 57/143 (39%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Frame = +3
Query: 99 PPPPHHSGL----NSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQ 266
P PH S L N+ Q AV L+ +S G GSGKTR + RV LV+VH+V P +
Sbjct: 3 PANPHESALLEDLNAPQREAVLHGDGPLLVLS-GAGSGKTRVITRRVAYLVKVHNVYPWR 61
Query: 267 IAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGS 446
I +TFT KAA E+R+RL LGA A E+V+ TFHS +A++LR+ + V
Sbjct: 62 ILAVTFTNKAAREMRERLVQLLGA-QANELVVSTFHSAAAQILRREAEHV---------- 110
Query: 447 RLAGLRKDFRVLEEDEQSAVIIR 515
GL + F + ++ +Q V+ R
Sbjct: 111 ---GLTRSFVIYDDSDQLNVVKR 130
[149][TOP]
>UniRef100_C6XMI1 UvrD/REP helicase n=1 Tax=Hirschia baltica ATCC 49814
RepID=C6XMI1_HIRBI
Length = 793
Score = 83.2 bits (204), Expect = 1e-14
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Frame = +3
Query: 84 PPSSPPPPPHH-SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRP 260
PPS+P + GLN+EQ AV + + G + V AG G+GKTR L R+ ++
Sbjct: 20 PPSAPARDADYLDGLNAEQRDAV-ETTDGALLVLAGAGTGKTRVLTTRLAHILNQRKAWA 78
Query: 261 KQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASG 440
Q +TFT KAA E+R+R +G A LGTFHS+S+++LR+H ++V
Sbjct: 79 SQTLTVTFTNKAAREMRERAEKLIGDEAQSLSWLGTFHSVSSKILRRHAEIV-------- 130
Query: 441 GSRLAGLRKDFRVLEEDEQ 497
GL +F +++ D+Q
Sbjct: 131 -----GLESNFTIIDTDDQ 144
[150][TOP]
>UniRef100_C5BKE6 DNA helicase II n=1 Tax=Teredinibacter turnerae T7901
RepID=C5BKE6_TERTT
Length = 728
Score = 83.2 bits (204), Expect = 1e-14
Identities = 54/135 (40%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Frame = +3
Query: 123 LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAAD 302
LNS Q AV G V AG GSGKTR LV R+ L++ SV P Q+ +TFT KAA
Sbjct: 10 LNSAQREAVA-APLGNQLVLAGAGSGKTRVLVHRIAWLMEQQSVSPHQVMAVTFTNKAAR 68
Query: 303 ELRKRLR----DALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKD 470
E+R+RL D LG + +GTFH ++ RLL+ H+Q AGL ++
Sbjct: 69 EMRERLTHLIGDRLGPRGVHSMWVGTFHGIAHRLLKAHWQ-------------EAGLSQN 115
Query: 471 FRVLEEDEQSAVIIR 515
F++++ D+Q +I R
Sbjct: 116 FQIMDSDDQLRLIKR 130
[151][TOP]
>UniRef100_B1LTW6 UvrD/REP helicase n=1 Tax=Methylobacterium radiotolerans JCM 2831
RepID=B1LTW6_METRJ
Length = 797
Score = 83.2 bits (204), Expect = 1e-14
Identities = 49/126 (38%), Positives = 68/126 (53%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN EQ AV + + G V V AG G+GKTR L R+ L+ RP I +TFT KAA
Sbjct: 37 GLNPEQRRAV-ETTEGPVLVLAGAGTGKTRVLTTRIAHLIATGRARPFDILAVTFTNKAA 95
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E++ R+ +G LGTFH++ ++LR+H +LV GL+ DF +
Sbjct: 96 REMKHRIGALIGPAGEGMPWLGTFHAIGTKILRRHAELV-------------GLKSDFTI 142
Query: 480 LEEDEQ 497
L D+Q
Sbjct: 143 LGTDDQ 148
[152][TOP]
>UniRef100_A5UPM7 UvrD/REP helicase n=1 Tax=Roseiflexus sp. RS-1 RepID=A5UPM7_ROSS1
Length = 751
Score = 83.2 bits (204), Expect = 1e-14
Identities = 55/133 (41%), Positives = 70/133 (52%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
S LN Q AV V G V V AGPGSGKTR L RV L+ V V P I +TFT KA
Sbjct: 9 SALNPAQQQAVT-VDPGPVLVLAGPGSGKTRVLTHRVAYLIGVQGVDPHTILAVTFTNKA 67
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R RL +GA + + +GTFHS+ AR LR+ + G +DF
Sbjct: 68 AREMRDRLVALIGAGQSAALTVGTFHSICARFLRRDIVHL-------------GRERDFA 114
Query: 477 VLEEDEQSAVIIR 515
+ + D+Q V+ R
Sbjct: 115 IYDTDDQLRVMKR 127
[153][TOP]
>UniRef100_C1US55 DNA/RNA helicase, superfamily I n=1 Tax=Haliangium ochraceum DSM
14365 RepID=C1US55_9DELT
Length = 1117
Score = 83.2 bits (204), Expect = 1e-14
Identities = 64/174 (36%), Positives = 84/174 (48%), Gaps = 11/174 (6%)
Frame = +3
Query: 21 PARAAPDQQSGSSGKPHRSHDPPSSPPPPPHH-----------SGLNSEQLAAVKDVSAG 167
P A+P + + G PPS P P S L+ EQ A + V
Sbjct: 410 PVPASPASVASAPGTAAEFDPPPSEIPRPSPETLRDGAASSLLSALDPEQRRAAECVHGP 469
Query: 168 LVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAA 347
L+ V AGPG+GKTRTL R+ LV+ V P +TFT +AA ELR+RL DAL A
Sbjct: 470 LLIV-AGPGTGKTRTLTHRIAHLVEDIGVEPAACLAITFTNRAAGELRERL-DALLPGAG 527
Query: 348 EEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQSAVI 509
V + TFHSL+ R+LR++ AGL + FRV E E A++
Sbjct: 528 AGVAVHTFHSLALRILREN-------------RVRAGLHRGFRVAAESECVALL 568
[154][TOP]
>UniRef100_UPI0001844EFF hypothetical protein PROVRUST_00613 n=1 Tax=Providencia rustigianii
DSM 4541 RepID=UPI0001844EFF
Length = 764
Score = 82.8 bits (203), Expect = 1e-14
Identities = 55/132 (41%), Positives = 76/132 (57%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN +Q AV L+ V AG GSGKTR LV R+ L+ V + P I +TFT KAA
Sbjct: 53 GLNDKQREAVAAPRTNLL-VLAGAGSGKTRVLVHRIAWLMSVENASPFSIMAVTFTNKAA 111
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R R+ +G T+ + +GTFH L+ RLLRQH+ +D A L +DF++
Sbjct: 112 AEMRHRINHLIG-TSEGGMWIGTFHGLAHRLLRQHY--LD-----------ANLPQDFQI 157
Query: 480 LEEDEQSAVIIR 515
L+ D+Q +I R
Sbjct: 158 LDSDDQYRLIRR 169
[155][TOP]
>UniRef100_Q8KFI3 DNA helicase II n=1 Tax=Chlorobaculum tepidum RepID=Q8KFI3_CHLTE
Length = 759
Score = 82.8 bits (203), Expect = 1e-14
Identities = 50/133 (37%), Positives = 73/133 (54%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN Q AV + G V V AG GSGKTR + R+ L++ V P+ I LTFT KAA
Sbjct: 18 GLNDVQRQAVL-ATEGPVMVLAGAGSGKTRVITYRIAHLIRNVGVLPQNILALTFTNKAA 76
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R+R+ L +A + +GTFHS+ ARLLR + L+ G ++F +
Sbjct: 77 GEMRQRIDSILEYGSASSLWIGTFHSVFARLLRSYIHLI-------------GYDRNFSI 123
Query: 480 LEEDEQSAVIIRC 518
+ D+ ++I +C
Sbjct: 124 FDADDSKSLIKQC 136
[156][TOP]
>UniRef100_Q5HBT8 DNA helicase II n=1 Tax=Ehrlichia ruminantium str. Welgevonden
RepID=Q5HBT8_EHRRW
Length = 639
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/131 (35%), Positives = 76/131 (58%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN +Q AV +++ G + + AG G+GKTRT+ +R+ ++ + P QI +TFT KA
Sbjct: 6 TSLNEDQKKAVTNIN-GPILILAGAGTGKTRTITSRIAYILNNNFALPSQILAVTFTNKA 64
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A+E+ R+ + T A + LGTFH+++ ++LRQH + V GL+ DF
Sbjct: 65 ANEMLSRINE---LTCASNIWLGTFHAIATKILRQHAEAV-------------GLKSDFT 108
Query: 477 VLEEDEQSAVI 509
++ D+Q VI
Sbjct: 109 IIGTDDQLQVI 119
[157][TOP]
>UniRef100_Q5FHA7 DNA helicase II n=1 Tax=Ehrlichia ruminantium str. Gardel
RepID=Q5FHA7_EHRRG
Length = 639
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/131 (35%), Positives = 76/131 (58%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN +Q AV +++ G + + AG G+GKTRT+ +R+ ++ + P QI +TFT KA
Sbjct: 6 TSLNEDQKKAVTNIN-GPILILAGAGTGKTRTITSRIAYILNNNFALPNQILAVTFTNKA 64
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A+E+ R+ + T A + LGTFH+++ ++LRQH + V GL+ DF
Sbjct: 65 ANEMLSRINE---LTCASNIWLGTFHAIATKILRQHAEAV-------------GLKSDFT 108
Query: 477 VLEEDEQSAVI 509
++ D+Q VI
Sbjct: 109 IIGTDDQLQVI 119
[158][TOP]
>UniRef100_Q3K4C4 DNA helicase II n=1 Tax=Pseudomonas fluorescens Pf0-1
RepID=Q3K4C4_PSEPF
Length = 727
Score = 82.8 bits (203), Expect = 1e-14
Identities = 54/133 (40%), Positives = 72/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV G V AG GSGKTR LV R+ L+QV + P I +TFT KA
Sbjct: 10 NSLNDAQRQAVA-APVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSILSVTFTNKA 68
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R R+ LG A + +GTFH L+ RLLR H+Q AGL + F+
Sbjct: 69 AAEMRHRIEQLLGINPA-GMWVGTFHGLAHRLLRAHWQ-------------EAGLSQTFQ 114
Query: 477 VLEEDEQSAVIIR 515
+L+ D+Q ++ R
Sbjct: 115 ILDSDDQQRLVKR 127
[159][TOP]
>UniRef100_Q1I2M3 DNA-dependent ATPase I and helicase II n=1 Tax=Pseudomonas
entomophila L48 RepID=Q1I2M3_PSEE4
Length = 727
Score = 82.8 bits (203), Expect = 1e-14
Identities = 55/133 (41%), Positives = 72/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV G V AG GSGKTR LV R+ L+QV P I +TFT KA
Sbjct: 11 NSLNDAQRQAVA-AQVGRQLVLAGAGSGKTRVLVHRIAWLIQVVQASPHSILSVTFTNKA 69
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R R+ LG A + +GTFH L+ RLLR H+Q AGL ++F+
Sbjct: 70 AAEMRHRIEQLLGINPA-GMWVGTFHGLAHRLLRAHWQ-------------EAGLAQNFQ 115
Query: 477 VLEEDEQSAVIIR 515
+L+ D+Q +I R
Sbjct: 116 ILDSDDQQRLIKR 128
[160][TOP]
>UniRef100_Q11GU4 ATP-dependent DNA helicase, Rep family n=1 Tax=Chelativorans sp.
BNC1 RepID=Q11GU4_MESSB
Length = 876
Score = 82.8 bits (203), Expect = 1e-14
Identities = 50/131 (38%), Positives = 69/131 (52%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
P + GLN EQ AV + + G V V AG G+GKTR L R+ ++ P QI +TF
Sbjct: 39 PRYLEGLNPEQRLAV-ETTEGPVLVLAGAGTGKTRVLTTRIAHILATGRAYPSQILAVTF 97
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA E++ R+ +G LGTFHS+ +LLR+H + LAGL
Sbjct: 98 TNKAAREMKTRIGVLVGQAIEGMPWLGTFHSIGVKLLRRH-------------AELAGLT 144
Query: 465 KDFRVLEEDEQ 497
F +L+ D+Q
Sbjct: 145 SSFTILDTDDQ 155
[161][TOP]
>UniRef100_Q2GFX8 Helicase, UvrD/Rep family n=2 Tax=Ehrlichia chaffeensis
RepID=Q2GFX8_EHRCR
Length = 639
Score = 82.8 bits (203), Expect = 1e-14
Identities = 46/131 (35%), Positives = 77/131 (58%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN +Q AV +++ G + + AG G+GKTRT+ +R+ ++ + P QI +TFT KA
Sbjct: 6 TSLNEDQREAVININ-GPILILAGAGTGKTRTITSRIAYIINNNFALPSQILAVTFTNKA 64
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A+E+ R+ + T + LGTFH+++A++LRQH ++V GL+ DF
Sbjct: 65 ANEMLSRISE---LTPVYNIWLGTFHAIAAKILRQHAEVV-------------GLKNDFT 108
Query: 477 VLEEDEQSAVI 509
++ D+Q VI
Sbjct: 109 IINTDDQLQVI 119
[162][TOP]
>UniRef100_C5S7U4 UvrD/REP helicase n=1 Tax=Allochromatium vinosum DSM 180
RepID=C5S7U4_CHRVI
Length = 732
Score = 82.8 bits (203), Expect = 1e-14
Identities = 55/131 (41%), Positives = 73/131 (55%)
Frame = +3
Query: 123 LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAAD 302
LN Q AV G + + AG GSGKTR LV R+ L+QV V+P I +TFT KAA
Sbjct: 10 LNPAQREAVS-ADPGHLLILAGAGSGKTRVLVHRIAWLLQVQQVQPWSILAVTFTNKAAR 68
Query: 303 ELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVL 482
E+R RL + LG T + +GTFH L+ R LR H+Q AGL + F++L
Sbjct: 69 EMRSRLDEMLG-TPVGGMWVGTFHGLAHRFLRAHWQ-------------DAGLPQQFQIL 114
Query: 483 EEDEQSAVIIR 515
+ D+Q +I R
Sbjct: 115 DSDDQLRLIKR 125
[163][TOP]
>UniRef100_C2CM59 ATP-dependent DNA helicase n=1 Tax=Corynebacterium striatum ATCC
6940 RepID=C2CM59_CORST
Length = 869
Score = 82.8 bits (203), Expect = 1e-14
Identities = 56/158 (35%), Positives = 80/158 (50%)
Frame = +3
Query: 21 PARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSG 200
PARAA S S + P P GLN +Q+ AV + L+ V AG GSG
Sbjct: 44 PARAATPPASASQRLASHAAADQRPAGPDPLTEGLNPQQIEAVTHAGSPLLIV-AGAGSG 102
Query: 201 KTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSL 380
KT L R+ L++ V P +I +TFT KAA E+++R+ +G AE + + TFHS+
Sbjct: 103 KTAVLTRRIAYLMRNRGVAPWEILAITFTNKAAAEMKERVGQLVG-PVAERMWVSTFHSI 161
Query: 381 SARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDE 494
R+LRQ+ QLV GL +F + + D+
Sbjct: 162 CVRILRQNAQLV------------PGLNTNFTIYDGDD 187
[164][TOP]
>UniRef100_C0XQ81 ATP-dependent DNA helicase n=1 Tax=Corynebacterium lipophiloflavum
DSM 44291 RepID=C0XQ81_9CORY
Length = 764
Score = 82.8 bits (203), Expect = 1e-14
Identities = 51/130 (39%), Positives = 75/130 (57%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN +Q AAVK S G + + AG GSGKT L R+ L+Q +V P QI +TFT KAA
Sbjct: 8 GLNPQQEAAVKH-SGGPLLIVAGAGSGKTAVLTRRIAYLLQERAVAPWQILAITFTNKAA 66
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+++R+ + +G A+ + + TFHS+ R+LRQ QLV AGL +F +
Sbjct: 67 AEMKERVANLVG-PEAQRMWVATFHSVCVRILRQQAQLV------------AGLNTNFSI 113
Query: 480 LEEDEQSAVI 509
+ D+ ++
Sbjct: 114 YDSDDSRRLL 123
[165][TOP]
>UniRef100_B6XD08 Putative uncharacterized protein n=1 Tax=Providencia alcalifaciens
DSM 30120 RepID=B6XD08_9ENTR
Length = 723
Score = 82.8 bits (203), Expect = 1e-14
Identities = 55/132 (41%), Positives = 76/132 (57%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN +Q AV L+ V AG GSGKTR LV R+ L+ V + P I +TFT KAA
Sbjct: 12 GLNDKQREAVAAPRTNLL-VLAGAGSGKTRVLVHRIAWLMSVENASPFSIMAVTFTNKAA 70
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R R+ +G T+ + +GTFH L+ RLLRQH+ +D A L +DF++
Sbjct: 71 AEMRHRINQLVG-TSEGGMWIGTFHGLAHRLLRQHY--LD-----------ANLPQDFQI 116
Query: 480 LEEDEQSAVIIR 515
L+ D+Q +I R
Sbjct: 117 LDSDDQYRLIRR 128
[166][TOP]
>UniRef100_A5P776 DNA and RNA helicase n=1 Tax=Erythrobacter sp. SD-21
RepID=A5P776_9SPHN
Length = 196
Score = 82.8 bits (203), Expect = 1e-14
Identities = 52/145 (35%), Positives = 78/145 (53%), Gaps = 6/145 (4%)
Frame = +3
Query: 81 DPPSSPPP------PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQ 242
D P+ P P PP+ + LN+ Q AV + G V + AG G+GKT L AR+ L+
Sbjct: 3 DFPAPPSPAEDGAIPPYAAPLNAPQREAVL-TTEGPVLMLAGAGTGKTAALTARLAHLIA 61
Query: 243 VHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDR 422
P +I +TFT KAA E+R+R+ +G LGTFHS+ AR+LR+H +LV
Sbjct: 62 TRRAWPSEILCVTFTNKAAREMRERVGRHIGDAVDGMPWLGTFHSIGARMLRRHAELV-- 119
Query: 423 GAGASGGSRLAGLRKDFRVLEEDEQ 497
GL+ ++ +++ D+Q
Sbjct: 120 -----------GLQSNYTIIDTDDQ 133
[167][TOP]
>UniRef100_Q3Z790 ATP-dependent DNA helicase PcrA n=1 Tax=Dehalococcoides ethenogenes
195 RepID=Q3Z790_DEHE1
Length = 738
Score = 82.4 bits (202), Expect = 2e-14
Identities = 52/131 (39%), Positives = 77/131 (58%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+GLN Q AV+ V G V + AGPGSGKTR + R+ L++V + P +I +TFT KA
Sbjct: 6 TGLNPAQKQAVEAVE-GPVLILAGPGSGKTRVITHRIAYLIKVVGINPHRIMAVTFTNKA 64
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+ RL + L +AA + +GTFH++ AR+LRQ G L G+ DF
Sbjct: 65 AREMETRL-NLLAPSAAGRLTMGTFHAICARILRQ------------DGLPL-GVPADFV 110
Query: 477 VLEEDEQSAVI 509
+ ++D+Q ++I
Sbjct: 111 IYDDDDQQSLI 121
[168][TOP]
>UniRef100_C5C915 ATP-dependent DNA helicase PcrA n=1 Tax=Micrococcus luteus NCTC
2665 RepID=C5C915_MICLC
Length = 858
Score = 82.4 bits (202), Expect = 2e-14
Identities = 52/129 (40%), Positives = 72/129 (55%)
Frame = +3
Query: 12 PDSPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGP 191
P + RAA D ++G+ G + + P GLN +Q AAV A L+ V AG
Sbjct: 33 PPAVTRAAADPEAGARGWGDDAAGAAVAHTPDSLVEGLNPQQSAAVTHTGAPLLIV-AGA 91
Query: 192 GSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTF 371
GSGKTR L R+ L+ RP +I +TFT KAA E+R+R+ +G T A+ + + TF
Sbjct: 92 GSGKTRVLTHRIAWLLATGRARPHEILAITFTNKAAAEMRERVAGLIGPT-AQRMWISTF 150
Query: 372 HSLSARLLR 398
HS + RLLR
Sbjct: 151 HSSAVRLLR 159
[169][TOP]
>UniRef100_C3PEZ5 Putative ATP-dependent DNA helicase II n=1 Tax=Corynebacterium
aurimucosum ATCC 700975 RepID=C3PEZ5_CORA7
Length = 852
Score = 82.4 bits (202), Expect = 2e-14
Identities = 58/163 (35%), Positives = 83/163 (50%), Gaps = 1/163 (0%)
Frame = +3
Query: 9 RPDSPARAAPDQQSGS-SGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSA 185
RP S + + D +G S P + D PS P GLN +Q AV + L+ V A
Sbjct: 19 RPRSSSAPSTDASAGGFSPVPGPNADTPSGQASDPLLEGLNPQQEEAVTHSGSPLLIV-A 77
Query: 186 GPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLG 365
G GSGKT L R+ L++ V P QI +TFT KAA E+++R+ +G AE + +
Sbjct: 78 GAGSGKTAVLTRRIAYLMRERGVAPWQILAITFTNKAAAEMKERVGQLVG-PVAERMWVS 136
Query: 366 TFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDE 494
TFHS+ R+LR + QLV GL +F + + D+
Sbjct: 137 TFHSICVRILRNNAQLV------------PGLNTNFTIYDGDD 167
[170][TOP]
>UniRef100_C3K4G1 DNA helicase II n=1 Tax=Pseudomonas fluorescens SBW25
RepID=C3K4G1_PSEFS
Length = 727
Score = 82.4 bits (202), Expect = 2e-14
Identities = 53/133 (39%), Positives = 73/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV G V AG GSGKTR LV R+ L+QV + P I +TFT KA
Sbjct: 10 NSLNDAQRQAVA-APVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSILSVTFTNKA 68
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R R+ +G + A + +GTFH L+ RLLR H+Q AGL + F+
Sbjct: 69 AAEMRHRIEQLMGISPA-GMWVGTFHGLAHRLLRAHWQ-------------EAGLSQTFQ 114
Query: 477 VLEEDEQSAVIIR 515
+L+ D+Q ++ R
Sbjct: 115 ILDSDDQQRLVKR 127
[171][TOP]
>UniRef100_A9L4Q9 DNA helicase II n=1 Tax=Shewanella baltica OS195 RepID=A9L4Q9_SHEB9
Length = 722
Score = 82.4 bits (202), Expect = 2e-14
Identities = 54/132 (40%), Positives = 73/132 (55%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN +Q AV + ++ V AG GSGKTR L R+ L+QV P I +TFT KAA
Sbjct: 9 GLNDKQREAVAAPQSSML-VLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAVTFTNKAA 67
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R+R+ G T + +GTFH L+ RLLR HFQ AGL + F++
Sbjct: 68 AEMRERVEKVAG-TNMGRMWIGTFHGLAHRLLRTHFQ-------------DAGLPQSFQI 113
Query: 480 LEEDEQSAVIIR 515
L+ D+Q +I R
Sbjct: 114 LDSDDQVRLIKR 125
[172][TOP]
>UniRef100_A6WT77 DNA helicase II n=1 Tax=Shewanella baltica OS185 RepID=A6WT77_SHEB8
Length = 722
Score = 82.4 bits (202), Expect = 2e-14
Identities = 54/132 (40%), Positives = 73/132 (55%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN +Q AV + ++ V AG GSGKTR L R+ L+QV P I +TFT KAA
Sbjct: 9 GLNDKQREAVAAPQSSML-VLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAVTFTNKAA 67
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R+R+ G T + +GTFH L+ RLLR HFQ AGL + F++
Sbjct: 68 AEMRERVEKVAG-TNMGRMWIGTFHGLAHRLLRTHFQ-------------DAGLPQSFQI 113
Query: 480 LEEDEQSAVIIR 515
L+ D+Q +I R
Sbjct: 114 LDSDDQVRLIKR 125
[173][TOP]
>UniRef100_A3CZR0 ATP-dependent DNA helicase UvrD n=2 Tax=Shewanella baltica
RepID=A3CZR0_SHEB5
Length = 722
Score = 82.4 bits (202), Expect = 2e-14
Identities = 54/132 (40%), Positives = 73/132 (55%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN +Q AV + ++ V AG GSGKTR L R+ L+QV P I +TFT KAA
Sbjct: 9 GLNDKQREAVAAPQSSML-VLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAVTFTNKAA 67
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R+R+ G T + +GTFH L+ RLLR HFQ AGL + F++
Sbjct: 68 AEMRERVEKVAG-TNMGRMWIGTFHGLAHRLLRTHFQ-------------DAGLPQSFQI 113
Query: 480 LEEDEQSAVIIR 515
L+ D+Q +I R
Sbjct: 114 LDSDDQVRLIKR 125
[174][TOP]
>UniRef100_A1RFH4 ATP-dependent DNA helicase UvrD n=2 Tax=Shewanella
RepID=A1RFH4_SHESW
Length = 722
Score = 82.4 bits (202), Expect = 2e-14
Identities = 54/132 (40%), Positives = 73/132 (55%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN +Q AV + ++ V AG GSGKTR L R+ L+QV P I +TFT KAA
Sbjct: 9 GLNDKQREAVAAPQSSML-VLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAVTFTNKAA 67
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R+R+ G T + +GTFH L+ RLLR HFQ AGL + F++
Sbjct: 68 AEMRERVEKVAG-TNMGRMWIGTFHGLAHRLLRTHFQ-------------DAGLPQSFQI 113
Query: 480 LEEDEQSAVIIR 515
L+ D+Q +I R
Sbjct: 114 LDSDDQVRLIKR 125
[175][TOP]
>UniRef100_C0ARW3 Putative uncharacterized protein n=1 Tax=Proteus penneri ATCC 35198
RepID=C0ARW3_9ENTR
Length = 506
Score = 82.4 bits (202), Expect = 2e-14
Identities = 54/132 (40%), Positives = 76/132 (57%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN +Q AV ++ V AG GSGKTR LV R+ L+ V P I +TFT KAA
Sbjct: 9 GLNDKQREAVAAPRINML-VLAGAGSGKTRVLVHRIAWLLSVEQASPFSIMAVTFTNKAA 67
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R R+ D +G T+ + +GTFHSL+ RLLR H+ +D A L +DF++
Sbjct: 68 AEMRHRIEDLIG-TSQGGMWIGTFHSLAHRLLRAHY--LD-----------ANLPQDFQI 113
Query: 480 LEEDEQSAVIIR 515
++ D+Q +I R
Sbjct: 114 IDSDDQYRLIRR 125
[176][TOP]
>UniRef100_C0A4D3 ATP-dependent DNA helicase n=1 Tax=Opitutaceae bacterium TAV2
RepID=C0A4D3_9BACT
Length = 1069
Score = 82.4 bits (202), Expect = 2e-14
Identities = 50/132 (37%), Positives = 74/132 (56%)
Frame = +3
Query: 93 SPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIA 272
+P P +GL+ +Q AA V L+ + AGPG+GKTRTL R+ L+ H P+
Sbjct: 491 TPERFPLLAGLDPDQRAAASIVRGPLLII-AGPGTGKTRTLTHRIAHLIADHDAPPESCL 549
Query: 273 VLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRL 452
+TFTR+AA E+R+RL L V++ TFH+L +LR+ + +D GA R+
Sbjct: 550 AITFTRRAAGEMRERLAQLLPDGRGSRVLVTTFHALGLTILREQQEKLDLGAPL----RV 605
Query: 453 AGLRKDFRVLEE 488
AG R+ F + E
Sbjct: 606 AGEREAFALARE 617
[177][TOP]
>UniRef100_A6E4I2 UvrD/REP helicase n=1 Tax=Roseovarius sp. TM1035 RepID=A6E4I2_9RHOB
Length = 779
Score = 82.4 bits (202), Expect = 2e-14
Identities = 49/132 (37%), Positives = 72/132 (54%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ LN EQ A + + G V + AG G+GKT+ L R++ L+ P I +T
Sbjct: 24 PAPYLDDLNPEQRRAAETLD-GPVLMLAGAGTGKTKALTTRIVHLMNTGRAGPGDILAVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E+++R+ LG A LGTFHS+ +LLR+H +LVD L
Sbjct: 83 FTNKAAREMKERVGRLLGQPAEGMPWLGTFHSICVKLLRRHAELVD-------------L 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[178][TOP]
>UniRef100_A3VXP8 DNA helicase II, putative n=1 Tax=Roseovarius sp. 217
RepID=A3VXP8_9RHOB
Length = 779
Score = 82.4 bits (202), Expect = 2e-14
Identities = 49/132 (37%), Positives = 72/132 (54%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ LN EQ A + + G V + AG G+GKT+ L R++ L+ P I +T
Sbjct: 24 PAPYLDDLNPEQRRAAETLD-GPVLMLAGAGTGKTKALTTRIVHLMNTGRAGPGDILAVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E+++R+ LG A LGTFHS+ +LLR+H +LVD L
Sbjct: 83 FTNKAAREMKERVGRLLGQPAEGMPWLGTFHSICVKLLRRHAELVD-------------L 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[179][TOP]
>UniRef100_A2UUZ2 DNA helicase II n=1 Tax=Shewanella putrefaciens 200
RepID=A2UUZ2_SHEPU
Length = 722
Score = 82.4 bits (202), Expect = 2e-14
Identities = 54/132 (40%), Positives = 73/132 (55%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN +Q AV + ++ V AG GSGKTR L R+ L+QV P I +TFT KAA
Sbjct: 9 GLNDKQREAVAAPQSSML-VLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAVTFTNKAA 67
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R+R+ G T + +GTFH L+ RLLR HFQ AGL + F++
Sbjct: 68 AEMRERVEKVAG-TNMGRMWIGTFHGLAHRLLRTHFQ-------------DAGLPQSFQI 113
Query: 480 LEEDEQSAVIIR 515
L+ D+Q +I R
Sbjct: 114 LDSDDQVRLIKR 125
[180][TOP]
>UniRef100_Q4WHX0 ATP-depentend DNA helicase, putative n=1 Tax=Aspergillus fumigatus
RepID=Q4WHX0_ASPFU
Length = 1001
Score = 82.4 bits (202), Expect = 2e-14
Identities = 51/132 (38%), Positives = 72/132 (54%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLNS Q AAV A ++ V A PGSGKT+TL ARV L+ + +P+ + TFT KA+
Sbjct: 7 GLNSAQKAAVTS-PASVLQVLAPPGSGKTKTLTARVAYLLSHYGYQPQDVICCTFTIKAS 65
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R+RL +G ++LGTFHS+ R L + L+ GLRK F +
Sbjct: 66 REMRERLASLVGNEVQSRLILGTFHSICRRYLVSYGYLI-------------GLRKGFGI 112
Query: 480 LEEDEQSAVIIR 515
+ + A+I R
Sbjct: 113 ADSSDSLAIIKR 124
[181][TOP]
>UniRef100_B0XUR3 ATP-depentend DNA helicase, putative n=1 Tax=Aspergillus fumigatus
A1163 RepID=B0XUR3_ASPFC
Length = 1001
Score = 82.4 bits (202), Expect = 2e-14
Identities = 51/132 (38%), Positives = 72/132 (54%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLNS Q AAV A ++ V A PGSGKT+TL ARV L+ + +P+ + TFT KA+
Sbjct: 7 GLNSAQKAAVTS-PASVLQVLAPPGSGKTKTLTARVAYLLSHYGYQPQDVICCTFTIKAS 65
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R+RL +G ++LGTFHS+ R L + L+ GLRK F +
Sbjct: 66 REMRERLASLVGNEVQSRLILGTFHSICRRYLVSYGYLI-------------GLRKGFGI 112
Query: 480 LEEDEQSAVIIR 515
+ + A+I R
Sbjct: 113 ADSSDSLAIIKR 124
[182][TOP]
>UniRef100_UPI000023F08A hypothetical protein FG08405.1 n=1 Tax=Gibberella zeae PH-1
RepID=UPI000023F08A
Length = 1060
Score = 82.0 bits (201), Expect = 2e-14
Identities = 51/131 (38%), Positives = 74/131 (56%)
Frame = +3
Query: 123 LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAAD 302
LN Q AV +A V + AGPGSGKT TL +RV+ L+Q RP + V TFT KAA
Sbjct: 13 LNEAQRRAVTS-TASTVAILAGPGSGKTHTLTSRVVWLIQRVGYRPSDVIVATFTVKAAR 71
Query: 303 ELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVL 482
E+++R+ LG +++VLGTFHS++ R L + G+R+ GL F +
Sbjct: 72 EMKERIGKTLGEECEKKIVLGTFHSIARRYLSIY------------GNRI-GLDSKFGIA 118
Query: 483 EEDEQSAVIIR 515
++ + A+I R
Sbjct: 119 DDGDSRAIIQR 129
[183][TOP]
>UniRef100_Q3SQ27 ATP-dependent DNA helicase, Rep family n=1 Tax=Nitrobacter
winogradskyi Nb-255 RepID=Q3SQ27_NITWN
Length = 816
Score = 82.0 bits (201), Expect = 2e-14
Identities = 51/131 (38%), Positives = 71/131 (54%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
P + SGLN EQ AV+ + G V V AG G+GKTR L R+ ++ R +I +TF
Sbjct: 32 PRYLSGLNPEQREAVETLD-GPVLVLAGAGTGKTRVLTTRIAHILSQGRARSGEILSVTF 90
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA E++ RL LG LGTFHS++ R+LR H +LV L+
Sbjct: 91 TNKAAREMKHRLGQMLGQAVEGMPWLGTFHSIAGRILRVHAELVQ-------------LK 137
Query: 465 KDFRVLEEDEQ 497
+F +L+ D+Q
Sbjct: 138 SNFTILDVDDQ 148
[184][TOP]
>UniRef100_Q2RLV0 UvrD/REP helicase n=1 Tax=Moorella thermoacetica ATCC 39073
RepID=Q2RLV0_MOOTA
Length = 1232
Score = 82.0 bits (201), Expect = 2e-14
Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 8/109 (7%)
Frame = +3
Query: 96 PPPPPHHSG-------LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSV 254
P P P SG LN EQ +AV + G V V AGPG+GKTRTLV R+ L++ V
Sbjct: 520 PAPVPAGSGGPGLTGALNPEQQSAVT-AATGPVVVIAGPGTGKTRTLVYRLAYLIKERGV 578
Query: 255 RPKQIAVLTFTRKAADELRKRLRDALG-ATAAEEVVLGTFHSLSARLLR 398
P +IA +TFT KAA E+R+R+ D LG E + +GTFHS+ LL+
Sbjct: 579 APGEIAAVTFTNKAAAEIRQRVADLLGDRDGMESLTVGTFHSICLDLLQ 627
[185][TOP]
>UniRef100_Q02DR6 DNA helicase II n=1 Tax=Pseudomonas aeruginosa UCBPP-PA14
RepID=Q02DR6_PSEAB
Length = 728
Score = 82.0 bits (201), Expect = 2e-14
Identities = 54/133 (40%), Positives = 72/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV G V AG GSGKTR LV R+ L+QV P I +TFT KA
Sbjct: 10 NSLNDPQRQAVA-APLGRQLVLAGAGSGKTRVLVHRIAWLIQVEHASPYSILSVTFTNKA 68
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R R+ LG A + +GTFH L+ RLLR H+ R AGL ++F+
Sbjct: 69 AAEMRHRIEQLLGINPA-GMWVGTFHGLAHRLLRAHW-------------REAGLSENFQ 114
Query: 477 VLEEDEQSAVIIR 515
+L+ D+Q ++ R
Sbjct: 115 ILDSDDQQRLVKR 127
[186][TOP]
>UniRef100_C5B538 Putative DNA helicase II n=1 Tax=Methylobacterium extorquens AM1
RepID=C5B538_METEA
Length = 707
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/94 (52%), Positives = 61/94 (64%)
Frame = +3
Query: 123 LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAAD 302
L+ EQ AA VS G V + AG G+GKTRTL AR+ LV+ V P I TFT KAA
Sbjct: 14 LDPEQRAAAAAVSGGHVVI-AGAGTGKTRTLTARIAHLVRERGVDPSSIVGTTFTNKAAR 72
Query: 303 ELRKRLRDALGATAAEEVVLGTFHSLSARLLRQH 404
E+R+R+ A+ AA + LGTFHSL AR+LR+H
Sbjct: 73 EIRERV-GAVTGDAAAALRLGTFHSLGARILRRH 105
[187][TOP]
>UniRef100_B7V5Y4 DNA helicase II n=2 Tax=Pseudomonas aeruginosa RepID=B7V5Y4_PSEA8
Length = 728
Score = 82.0 bits (201), Expect = 2e-14
Identities = 54/133 (40%), Positives = 72/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV G V AG GSGKTR LV R+ L+QV P I +TFT KA
Sbjct: 10 NSLNDPQRQAVA-APLGRQLVLAGAGSGKTRVLVHRIAWLIQVEHASPYSILSVTFTNKA 68
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R R+ LG A + +GTFH L+ RLLR H+ R AGL ++F+
Sbjct: 69 AAEMRHRIEQLLGINPA-GMWVGTFHGLAHRLLRAHW-------------REAGLSENFQ 114
Query: 477 VLEEDEQSAVIIR 515
+L+ D+Q ++ R
Sbjct: 115 ILDSDDQQRLVKR 127
[188][TOP]
>UniRef100_A6VEQ9 DNA helicase II n=1 Tax=Pseudomonas aeruginosa PA7
RepID=A6VEQ9_PSEA7
Length = 728
Score = 82.0 bits (201), Expect = 2e-14
Identities = 54/133 (40%), Positives = 72/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV G V AG GSGKTR LV R+ L+QV P I +TFT KA
Sbjct: 10 NSLNDPQRQAVA-APLGRQLVLAGAGSGKTRVLVHRIAWLIQVEHASPYSILSVTFTNKA 68
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R R+ LG A + +GTFH L+ RLLR H+ R AGL ++F+
Sbjct: 69 AAEMRHRIEQLLGINPA-GMWVGTFHGLAHRLLRAHW-------------REAGLSENFQ 114
Query: 477 VLEEDEQSAVIIR 515
+L+ D+Q ++ R
Sbjct: 115 ILDSDDQQRLVKR 127
[189][TOP]
>UniRef100_Q0FF27 Putative uvrD/DNA Helicase II n=1 Tax=Rhodobacterales bacterium
HTCC2255 RepID=Q0FF27_9RHOB
Length = 800
Score = 82.0 bits (201), Expect = 2e-14
Identities = 47/130 (36%), Positives = 74/130 (56%)
Frame = +3
Query: 108 PHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFT 287
P+ LNS Q +AV+ ++ G V + AG G+GKT+ L R++ L+ ++ P +I +TFT
Sbjct: 29 PYLEDLNSAQRSAVETLN-GPVLMLAGAGTGKTKALTTRIVHLMNMNQAWPNEILAVTFT 87
Query: 288 RKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRK 467
KAA E++ R+ LG LGTFHSL ++LR+H S + GL+
Sbjct: 88 NKAAREMKSRVGAMLGNVGDGLPWLGTFHSLCVKILRRH-------------SEIVGLKS 134
Query: 468 DFRVLEEDEQ 497
+F +L+ D+Q
Sbjct: 135 NFTILDTDDQ 144
[190][TOP]
>UniRef100_D0D772 DNA helicase II n=1 Tax=Citreicella sp. SE45 RepID=D0D772_9RHOB
Length = 815
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/132 (37%), Positives = 74/132 (56%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ LN Q AV+ + G V + AG G+GKT+ L +R++ L+ RP +I +T
Sbjct: 24 PAPYLDDLNPAQREAVERLD-GPVLMLAGAGTGKTKALTSRIVHLLVSGKARPNEILSVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E+++R+ LG LGTFHS+ +LLR+H +LV GL
Sbjct: 83 FTNKAAREMKERVGRLLGQQIEGMPWLGTFHSICVKLLRRHAELV-------------GL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[191][TOP]
>UniRef100_A8CSP9 UvrD/REP helicase n=1 Tax=Dehalococcoides sp. VS RepID=A8CSP9_9CHLR
Length = 738
Score = 82.0 bits (201), Expect = 2e-14
Identities = 51/131 (38%), Positives = 77/131 (58%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+GLN Q AV +V G V + AGPGSGKTR + R+ L+++ + P +I +TFT KA
Sbjct: 6 TGLNPAQKQAV-EVVEGPVLILAGPGSGKTRVITHRIAYLIKIVGINPHRIMAVTFTNKA 64
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+ RL + L +AA + +GTFH++ AR+LRQ G L G+ DF
Sbjct: 65 AREMETRL-NLLAPSAAGRLTMGTFHAICARILRQ------------DGLPL-GVPADFV 110
Query: 477 VLEEDEQSAVI 509
+ ++D+Q ++I
Sbjct: 111 IYDDDDQQSLI 121
[192][TOP]
>UniRef100_A3L1I3 DNA helicase II n=2 Tax=Pseudomonas aeruginosa RepID=A3L1I3_PSEAE
Length = 728
Score = 82.0 bits (201), Expect = 2e-14
Identities = 54/133 (40%), Positives = 72/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV G V AG GSGKTR LV R+ L+QV P I +TFT KA
Sbjct: 10 NSLNDPQRQAVA-APLGRQLVLAGAGSGKTRVLVHRIAWLIQVEHASPYSILSVTFTNKA 68
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R R+ LG A + +GTFH L+ RLLR H+ R AGL ++F+
Sbjct: 69 AAEMRHRIEQLLGINPA-GMWVGTFHGLAHRLLRAHW-------------REAGLSENFQ 114
Query: 477 VLEEDEQSAVIIR 515
+L+ D+Q ++ R
Sbjct: 115 ILDSDDQQRLVKR 127
[193][TOP]
>UniRef100_UPI0001AF4A44 DNA-dependent helicase II n=1 Tax=Pseudomonas syringae pv. oryzae
str. 1_6 RepID=UPI0001AF4A44
Length = 727
Score = 81.6 bits (200), Expect = 3e-14
Identities = 53/133 (39%), Positives = 73/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV S G V AG GSGKTR LV R+ L+QV P + +TFT KA
Sbjct: 10 NSLNDAQRQAVA-ASLGRQLVLAGAGSGKTRVLVHRIAWLMQVEQASPHSVLSVTFTNKA 68
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R R+ +G + A + +GTFH L+ RLLR H+Q AGL + F+
Sbjct: 69 AAEMRHRIEQLMGISPA-GMWVGTFHGLAHRLLRAHWQ-------------EAGLVQTFQ 114
Query: 477 VLEEDEQSAVIIR 515
+L+ D+Q ++ R
Sbjct: 115 ILDSDDQQRLVKR 127
[194][TOP]
>UniRef100_UPI00018735AB DNA helicase II n=1 Tax=Pseudomonas syringae pv. tomato T1
RepID=UPI00018735AB
Length = 727
Score = 81.6 bits (200), Expect = 3e-14
Identities = 53/133 (39%), Positives = 73/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV S G V AG GSGKTR LV R+ L+QV P + +TFT KA
Sbjct: 10 NSLNDAQRQAVA-ASLGRQLVLAGAGSGKTRVLVHRIAWLMQVEQASPHSVLSVTFTNKA 68
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R R+ +G + A + +GTFH L+ RLLR H+Q AGL + F+
Sbjct: 69 AAEMRHRIEQLMGISPA-GMWVGTFHGLAHRLLRAHWQ-------------EAGLVQTFQ 114
Query: 477 VLEEDEQSAVIIR 515
+L+ D+Q ++ R
Sbjct: 115 ILDSDDQQRLVKR 127
[195][TOP]
>UniRef100_Q8EJJ6 DNA helicase II n=1 Tax=Shewanella oneidensis RepID=Q8EJJ6_SHEON
Length = 722
Score = 81.6 bits (200), Expect = 3e-14
Identities = 53/132 (40%), Positives = 73/132 (55%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN +Q AV + ++ V AG GSGKTR L R+ L+QV P I +TFT KAA
Sbjct: 9 GLNDKQREAVAAPQSSML-VLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAVTFTNKAA 67
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R+R+ G T + +GTFH L+ RLLR HFQ AGL + F++
Sbjct: 68 AEMRERVEKVAG-TNMGRMWIGTFHGLAHRLLRTHFQ-------------DAGLPQSFQI 113
Query: 480 LEEDEQSAVIIR 515
L+ D+Q ++ R
Sbjct: 114 LDSDDQLRLLKR 125
[196][TOP]
>UniRef100_Q87U01 DNA helicase II n=1 Tax=Pseudomonas syringae pv. tomato
RepID=Q87U01_PSESM
Length = 727
Score = 81.6 bits (200), Expect = 3e-14
Identities = 53/133 (39%), Positives = 73/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV S G V AG GSGKTR LV R+ L+QV P + +TFT KA
Sbjct: 10 NSLNDAQRQAVA-ASLGRQLVLAGAGSGKTRVLVHRIAWLMQVEQASPHSVLSVTFTNKA 68
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R R+ +G + A + +GTFH L+ RLLR H+Q AGL + F+
Sbjct: 69 AAEMRHRIEQLMGISPA-GMWVGTFHGLAHRLLRAHWQ-------------EAGLVQTFQ 114
Query: 477 VLEEDEQSAVIIR 515
+L+ D+Q ++ R
Sbjct: 115 ILDSDDQQRLVKR 127
[197][TOP]
>UniRef100_Q4ZL80 UvrD/REP helicase n=1 Tax=Pseudomonas syringae pv. syringae B728a
RepID=Q4ZL80_PSEU2
Length = 727
Score = 81.6 bits (200), Expect = 3e-14
Identities = 53/133 (39%), Positives = 73/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV S G V AG GSGKTR LV R+ L+QV P + +TFT KA
Sbjct: 10 NSLNDAQRQAVA-ASLGRQLVLAGAGSGKTRVLVHRIAWLMQVEQASPHSVLSVTFTNKA 68
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R R+ +G + A + +GTFH L+ RLLR H+Q AGL + F+
Sbjct: 69 AAEMRHRIEQLMGISPA-GMWVGTFHGLAHRLLRAHWQ-------------EAGLVQTFQ 114
Query: 477 VLEEDEQSAVIIR 515
+L+ D+Q ++ R
Sbjct: 115 ILDSDDQQRLVKR 127
[198][TOP]
>UniRef100_Q48BM1 DNA helicase II n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A
RepID=Q48BM1_PSE14
Length = 727
Score = 81.6 bits (200), Expect = 3e-14
Identities = 53/133 (39%), Positives = 73/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV S G V AG GSGKTR LV R+ L+QV P + +TFT KA
Sbjct: 10 NSLNDAQRQAVA-ASLGRQLVLAGAGSGKTRVLVHRIAWLMQVEQASPHSVLSVTFTNKA 68
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R R+ +G + A + +GTFH L+ RLLR H+Q AGL + F+
Sbjct: 69 AAEMRHRIEQLMGISPA-GMWVGTFHGLAHRLLRAHWQ-------------EAGLVQTFQ 114
Query: 477 VLEEDEQSAVIIR 515
+L+ D+Q ++ R
Sbjct: 115 ILDSDDQQRLVKR 127
[199][TOP]
>UniRef100_Q0HN14 ATP-dependent DNA helicase UvrD n=1 Tax=Shewanella sp. MR-4
RepID=Q0HN14_SHESM
Length = 722
Score = 81.6 bits (200), Expect = 3e-14
Identities = 53/132 (40%), Positives = 73/132 (55%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN +Q AV + ++ V AG GSGKTR L R+ L+QV P I +TFT KAA
Sbjct: 9 GLNDKQREAVAAPQSSML-VLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAVTFTNKAA 67
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R+R+ G T + +GTFH L+ RLLR HFQ AGL + F++
Sbjct: 68 AEMRERVEKVAG-TNMGRMWIGTFHGLAHRLLRTHFQ-------------DAGLPQSFQI 113
Query: 480 LEEDEQSAVIIR 515
L+ D+Q ++ R
Sbjct: 114 LDSDDQVRLLKR 125
[200][TOP]
>UniRef100_A9HJP3 Putative DNA helicase II n=1 Tax=Gluconacetobacter diazotrophicus
PAl 5 RepID=A9HJP3_GLUDA
Length = 743
Score = 81.6 bits (200), Expect = 3e-14
Identities = 52/131 (39%), Positives = 73/131 (55%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
P + LN EQ AA+ + + G + V AG G+GKTR L R ++ RP QI +TF
Sbjct: 17 PDYLQRLNPEQRAAI-ETTDGPLLVLAGAGTGKTRVLTTRFAHILLSGRARPYQILAVTF 75
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA E+R+R+ LG E + LGTFH+L AR+LR+H + V G+G
Sbjct: 76 TNKAAREMRERIGALLG-EPVEGLWLGTFHALCARMLRRHAEYVGLGSG----------- 123
Query: 465 KDFRVLEEDEQ 497
F +L+ D+Q
Sbjct: 124 --FTILDTDDQ 132
[201][TOP]
>UniRef100_A6WZS6 UvrD/REP helicase n=1 Tax=Ochrobactrum anthropi ATCC 49188
RepID=A6WZS6_OCHA4
Length = 864
Score = 81.6 bits (200), Expect = 3e-14
Identities = 49/130 (37%), Positives = 68/130 (52%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
P + GLN EQ AV + G V V AG G+GKTR L R+ ++ P QI +TF
Sbjct: 42 PDYLKGLNPEQRQAVL-TTEGPVLVLAGAGTGKTRVLTTRIAHILTTGLAYPSQILAVTF 100
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA E+++R+ +G LGTFHS+ +LLR+H + LA L
Sbjct: 101 TNKAAREMKERIGHLVGGAVEGMPWLGTFHSIGVKLLRRH-------------AELANLT 147
Query: 465 KDFRVLEEDE 494
DF +L+ D+
Sbjct: 148 SDFTILDTDD 157
[202][TOP]
>UniRef100_A0KSE1 ATP-dependent DNA helicase UvrD n=1 Tax=Shewanella sp. ANA-3
RepID=A0KSE1_SHESA
Length = 722
Score = 81.6 bits (200), Expect = 3e-14
Identities = 53/132 (40%), Positives = 73/132 (55%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN +Q AV + ++ V AG GSGKTR L R+ L+QV P I +TFT KAA
Sbjct: 9 GLNDKQREAVAAPQSSML-VLAGAGSGKTRVLTHRIAWLMQVEQQSPYSILAVTFTNKAA 67
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R+R+ G T + +GTFH L+ RLLR HFQ AGL + F++
Sbjct: 68 AEMRERVEKVAG-TNMGRMWIGTFHGLAHRLLRTHFQ-------------DAGLPQSFQI 113
Query: 480 LEEDEQSAVIIR 515
L+ D+Q ++ R
Sbjct: 114 LDSDDQVRLLKR 125
[203][TOP]
>UniRef100_C4WF28 DNA helicase II n=1 Tax=Ochrobactrum intermedium LMG 3301
RepID=C4WF28_9RHIZ
Length = 859
Score = 81.6 bits (200), Expect = 3e-14
Identities = 49/130 (37%), Positives = 68/130 (52%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
P + GLN EQ AV + G V V AG G+GKTR L R+ ++ P QI +TF
Sbjct: 42 PDYLKGLNPEQRQAVL-TTEGPVLVLAGAGTGKTRVLTTRIAHILTTGLAYPSQILAVTF 100
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA E+++R+ +G LGTFHS+ +LLR+H + LA L
Sbjct: 101 TNKAAREMKERIGHLVGGAVEGMPWLGTFHSIGVKLLRRH-------------AELANLT 147
Query: 465 KDFRVLEEDE 494
DF +L+ D+
Sbjct: 148 SDFTILDTDD 157
[204][TOP]
>UniRef100_C1PAY7 UvrD/REP helicase n=1 Tax=Bacillus coagulans 36D1
RepID=C1PAY7_BACCO
Length = 232
Score = 81.6 bits (200), Expect = 3e-14
Identities = 53/131 (40%), Positives = 74/131 (56%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+GLN EQ AVK + G + + AG GSGKTR L RV L+ V P I +TFT KA
Sbjct: 10 NGLNPEQKEAVK-TTEGPLLILAGAGSGKTRVLTRRVAYLMVEKGVNPYNILAITFTNKA 68
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E++ R+ +G AAEEV + TFHS+ R+LR+ +DR G ++F
Sbjct: 69 AREMKDRIAGIMGG-AAEEVWISTFHSMCVRILRRD---IDR----------IGFNRNFS 114
Query: 477 VLEEDEQSAVI 509
+L+ +Q +VI
Sbjct: 115 ILDATDQLSVI 125
[205][TOP]
>UniRef100_B5ZKP8 UvrD/REP helicase n=1 Tax=Gluconacetobacter diazotrophicus PAl 5
RepID=B5ZKP8_GLUDA
Length = 760
Score = 81.6 bits (200), Expect = 3e-14
Identities = 52/131 (39%), Positives = 73/131 (55%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTF 284
P + LN EQ AA+ + + G + V AG G+GKTR L R ++ RP QI +TF
Sbjct: 34 PDYLQRLNPEQRAAI-ETTDGPLLVLAGAGTGKTRVLTTRFAHILLSGRARPYQILAVTF 92
Query: 285 TRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLR 464
T KAA E+R+R+ LG E + LGTFH+L AR+LR+H + V G+G
Sbjct: 93 TNKAAREMRERIGALLG-EPVEGLWLGTFHALCARMLRRHAEYVGLGSG----------- 140
Query: 465 KDFRVLEEDEQ 497
F +L+ D+Q
Sbjct: 141 --FTILDTDDQ 149
[206][TOP]
>UniRef100_B0MD30 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM
14662 RepID=B0MD30_9FIRM
Length = 1032
Score = 81.6 bits (200), Expect = 3e-14
Identities = 48/127 (37%), Positives = 73/127 (57%), Gaps = 1/127 (0%)
Frame = +3
Query: 24 ARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGK 203
A AA + +P + + P +G+N EQ AV + V V AGPG+GK
Sbjct: 428 AAAAEPGKKKKKIRPVKKETVMETDGPKGKDTGINKEQQEAVTAENRA-VAVIAGPGTGK 486
Query: 204 TRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGA-TAAEEVVLGTFHSL 380
T+TLV ++ LV+ +V P Q+ +TFT +AA E+R+RL LG A +++ +GTFHS+
Sbjct: 487 TKTLVDKIAYLVKERNVSPSQVTAVTFTNQAAAEMRERLAKRLGGKRAVKDMTIGTFHSI 546
Query: 381 SARLLRQ 401
+LL+Q
Sbjct: 547 CLQLLKQ 553
[207][TOP]
>UniRef100_A4REL5 Putative uncharacterized protein n=1 Tax=Magnaporthe grisea
RepID=A4REL5_MAGGR
Length = 819
Score = 81.6 bits (200), Expect = 3e-14
Identities = 53/131 (40%), Positives = 72/131 (54%)
Frame = +3
Query: 123 LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAAD 302
LN Q AV A V + AGPGSGKT TL +RV+ V V RP+ + V TFT KAA
Sbjct: 15 LNDAQRRAVSS-GATTVAILAGPGSGKTHTLASRVVWQVDVVGYRPQDVVVATFTVKAAR 73
Query: 303 ELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVL 482
E+ +R+ LG +VVLGTFHS+S R L A+ G ++ GL + F +
Sbjct: 74 EMGERICKVLGPERGRKVVLGTFHSISRRYL------------AAYGKKI-GLDQKFGIA 120
Query: 483 EEDEQSAVIIR 515
++ + A+I R
Sbjct: 121 DDSDSRAIITR 131
[208][TOP]
>UniRef100_Q2G8T6 ATP-dependent DNA helicase, Rep family n=1 Tax=Novosphingobium
aromaticivorans DSM 12444 RepID=Q2G8T6_NOVAD
Length = 765
Score = 81.3 bits (199), Expect = 4e-14
Identities = 53/142 (37%), Positives = 79/142 (55%), Gaps = 6/142 (4%)
Frame = +3
Query: 90 SSPPPP-PHHS-----GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHS 251
SSP P PH S GLN Q AV + G V + AG G+GKT L AR+ L++
Sbjct: 2 SSPVPANPHASNAWLDGLNPPQREAVT-TTEGPVLMLAGAGTGKTAALTARLANLLRQRL 60
Query: 252 VRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAG 431
P +I +TFT KAA E+R+R+ + +G LGTFH+++A++LR+H +LV
Sbjct: 61 AWPSEILCVTFTNKAAREMRERVGNLIGPAVEGMPWLGTFHAIAAKMLRRHAELV----- 115
Query: 432 ASGGSRLAGLRKDFRVLEEDEQ 497
GL+ +F +++ D+Q
Sbjct: 116 --------GLQSNFTIIDTDDQ 129
[209][TOP]
>UniRef100_B8ELH8 UvrD/REP helicase n=1 Tax=Methylocella silvestris BL2
RepID=B8ELH8_METSB
Length = 790
Score = 81.3 bits (199), Expect = 4e-14
Identities = 49/126 (38%), Positives = 69/126 (54%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN EQ AAV+ + G V V AG G+GKTR L R+ ++ R +I +TFT KAA
Sbjct: 36 GLNPEQRAAVEAID-GPVLVLAGAGTGKTRVLTTRIAHILAEGRARAHEILAVTFTNKAA 94
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R R+ G LGTFH++S ++LR+H +LV GL+ F +
Sbjct: 95 REMRDRVALLAGPVGEGMPWLGTFHAISTKILRRHAELV-------------GLKSSFTI 141
Query: 480 LEEDEQ 497
L+ D+Q
Sbjct: 142 LDTDDQ 147
[210][TOP]
>UniRef100_B2IH23 UvrD/REP helicase n=1 Tax=Beijerinckia indica subsp. indica ATCC
9039 RepID=B2IH23_BEII9
Length = 800
Score = 81.3 bits (199), Expect = 4e-14
Identities = 48/126 (38%), Positives = 71/126 (56%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN EQ AV+ + G V V AG G+GKTR L R+ ++ R +I +TFT KAA
Sbjct: 44 GLNPEQRRAVEALE-GPVLVLAGAGTGKTRVLTTRIAHILATGRARAHEILAVTFTNKAA 102
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+++R+ +G A LGTFH++S ++LR+H +LV GL+ F +
Sbjct: 103 REMKERVAALVGPVAEGMPWLGTFHAISTKILRRHAELV-------------GLQSTFTI 149
Query: 480 LEEDEQ 497
L+ D+Q
Sbjct: 150 LDTDDQ 155
[211][TOP]
>UniRef100_B0SHN1 ATP-dependent DNA helicase n=2 Tax=Leptospira biflexa serovar Patoc
RepID=B0SHN1_LEPBA
Length = 727
Score = 81.3 bits (199), Expect = 4e-14
Identities = 52/130 (40%), Positives = 72/130 (55%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLNSEQ AV+ V L+ + AG GSGKTR + R+ L+ H+V P QI +TFT KAA
Sbjct: 5 GLNSEQKLAVESVDGPLL-ILAGAGSGKTRVITYRIANLILNHNVYPNQILAVTFTNKAA 63
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
+E+R R R+ L + E + TFHSL LLR+ ++ GL +F V
Sbjct: 64 EEMRSRCRNLL-PDGSYEPFVRTFHSLCLYLLRRE-------------GKVLGLGSNFTV 109
Query: 480 LEEDEQSAVI 509
+ D Q ++I
Sbjct: 110 YDSDMQESLI 119
[212][TOP]
>UniRef100_A1WIJ4 ATP-dependent DNA helicase UvrD n=1 Tax=Verminephrobacter eiseniae
EF01-2 RepID=A1WIJ4_VEREI
Length = 793
Score = 81.3 bits (199), Expect = 4e-14
Identities = 59/145 (40%), Positives = 75/145 (51%)
Frame = +3
Query: 81 DPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRP 260
D PS+ P H LN EQLAAV + AG + AG GSGKTR L R+ L+Q RP
Sbjct: 9 DAPSAASPLLVH--LNPEQLAAVT-LPAGHALILAGAGSGKTRVLTTRIAWLLQNGHARP 65
Query: 261 KQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASG 440
I +TFT KAA E+ RL A+ + +GTFH L RLLR H Q
Sbjct: 66 GSILAVTFTNKAAKEMVARL-SAMLPVHVRGMWIGTFHGLCNRLLRAHHQ---------- 114
Query: 441 GSRLAGLRKDFRVLEEDEQSAVIIR 515
AGL + F++L+ +Q A + R
Sbjct: 115 ---AAGLPQTFQILDTQDQLAAVKR 136
[213][TOP]
>UniRef100_Q0EW02 DNA helicase II n=1 Tax=Mariprofundus ferrooxydans PV-1
RepID=Q0EW02_9PROT
Length = 699
Score = 81.3 bits (199), Expect = 4e-14
Identities = 50/131 (38%), Positives = 74/131 (56%)
Frame = +3
Query: 123 LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAAD 302
LN QLAAV + G + AG GSGKTRT++ R+ L+ V P +I +TFT KAA
Sbjct: 4 LNPAQLAAV-EAGDGPQLILAGAGSGKTRTIIHRIGHLISARGVAPHRILAVTFTNKAAA 62
Query: 303 ELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVL 482
EL+ RL + +G VV GTFH++S RLLR++ + + + F+V+
Sbjct: 63 ELKSRLSELIGDDGG-GVVSGTFHAISLRLLRRYAEAL-------------AYPRSFQVI 108
Query: 483 EEDEQSAVIIR 515
+ D+Q A++ R
Sbjct: 109 DADDQKALVKR 119
[214][TOP]
>UniRef100_C7JGI5 DNA helicase II UvrD/Rep n=8 Tax=Acetobacter pasteurianus
RepID=C7JGI5_ACEP3
Length = 743
Score = 81.3 bits (199), Expect = 4e-14
Identities = 51/125 (40%), Positives = 73/125 (58%)
Frame = +3
Query: 123 LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAAD 302
LN EQ AA+ + + G + V AG G+GKTR L R ++ +P QI +TFT KAA
Sbjct: 27 LNPEQRAAI-ETTDGPLLVLAGAGTGKTRVLTTRFAHILLTGRAKPWQILTVTFTNKAAR 85
Query: 303 ELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVL 482
E+R+R+ LG + AE + LGTFH+L AR+LR+H + V GL + F +L
Sbjct: 86 EMRERIGLLLG-SPAEGLWLGTFHALCARMLRRHAEYV-------------GLTQSFTIL 131
Query: 483 EEDEQ 497
+ D+Q
Sbjct: 132 DTDDQ 136
[215][TOP]
>UniRef100_C5EJB8 Putative uncharacterized protein n=1 Tax=Clostridiales bacterium
1_7_47FAA RepID=C5EJB8_9FIRM
Length = 1121
Score = 81.3 bits (199), Expect = 4e-14
Identities = 48/117 (41%), Positives = 70/117 (59%), Gaps = 4/117 (3%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN Q AV +S + V AGPG+GKT+TLV+R+ L+ V+P +I +TFT KAA
Sbjct: 520 GLNPNQRQAVGSISP-VTAVIAGPGTGKTKTLVSRLSYLIGERGVKPAEITAVTFTNKAA 578
Query: 300 DELRKRLRDAL-GATAAEEVVLGTFHSLSARLLRQH---FQLVDRGAGASGGSRLAG 458
+ELR+R+R L G + ++ +GTFHSL R+L+ L D G +++ G
Sbjct: 579 EELRQRIRRQLPGKRSLNQMQVGTFHSLCYRMLQNQGTGLSLADEGQQQECAAQVTG 635
[216][TOP]
>UniRef100_C4CHC3 DNA/RNA helicase, superfamily I n=1 Tax=Sphaerobacter thermophilus
DSM 20745 RepID=C4CHC3_9CHLR
Length = 737
Score = 81.3 bits (199), Expect = 4e-14
Identities = 46/99 (46%), Positives = 59/99 (59%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN Q AV ++ G V V AGPGSGKTR L RV L+ V P I +TFT KAA
Sbjct: 14 GLNEAQQRAVT-ITEGPVLVVAGPGSGKTRVLTHRVAYLIDQRGVSPWNILAVTFTNKAA 72
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLV 416
E+R RL +G A ++ +GTFH+L R+LR+ L+
Sbjct: 73 REMRDRLEVLVGPERARQLTVGTFHALCVRILRRDGHLI 111
[217][TOP]
>UniRef100_UPI0001744EB2 ATP-dependent DNA helicase n=1 Tax=Verrucomicrobium spinosum DSM
4136 RepID=UPI0001744EB2
Length = 665
Score = 80.9 bits (198), Expect = 5e-14
Identities = 45/129 (34%), Positives = 72/129 (55%)
Frame = +3
Query: 123 LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAAD 302
LN Q AVK + G V + AG G+GKTRT+ R+ +V + P I +TFT KAA+
Sbjct: 8 LNLPQREAVKTIH-GPVLILAGAGTGKTRTVTMRIAHMVD-EGISPSNILSVTFTNKAAN 65
Query: 303 ELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVL 482
E+R+R++D LG +++ LGTFH+ +LLR H + + G + +F +
Sbjct: 66 EMRERVKDMLGPAKGKDITLGTFHAFCMKLLRVHAEAI-------------GYKTNFSIY 112
Query: 483 EEDEQSAVI 509
+ EQ +++
Sbjct: 113 SQSEQISLV 121
[218][TOP]
>UniRef100_Q88C31 DNA helicase II n=1 Tax=Pseudomonas putida KT2440
RepID=Q88C31_PSEPK
Length = 728
Score = 80.9 bits (198), Expect = 5e-14
Identities = 54/133 (40%), Positives = 73/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV + G V AG GSGKTR LV R+ L+QV P I +TFT KA
Sbjct: 11 NSLNDAQRQAVA-ATLGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSILSVTFTNKA 69
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R+R+ LG A + +GTFH L+ RLLR H+Q A L ++F+
Sbjct: 70 AAEMRQRIEQLLGINPA-GMWVGTFHGLAHRLLRAHWQ-------------EARLVQNFQ 115
Query: 477 VLEEDEQSAVIIR 515
+L+ D+Q +I R
Sbjct: 116 ILDSDDQQRLIKR 128
[219][TOP]
>UniRef100_Q3ZY76 ATP-dependent DNA helicase PcrA n=1 Tax=Dehalococcoides sp. CBDB1
RepID=Q3ZY76_DEHSC
Length = 738
Score = 80.9 bits (198), Expect = 5e-14
Identities = 51/131 (38%), Positives = 76/131 (58%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+GLN Q AV+ V G V + AGPGSGKTR + R+ L++V + P +I +TFT KA
Sbjct: 6 TGLNPAQKKAVEAVE-GPVLILAGPGSGKTRVITHRIAYLIKVVGITPHRIMAVTFTNKA 64
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+ RL + L +A + +GTFH++ AR+LRQ G L G+ DF
Sbjct: 65 AREMETRL-NQLAPSAVGRLTMGTFHAICARILRQ------------DGLPL-GVPSDFV 110
Query: 477 VLEEDEQSAVI 509
+ ++D+Q ++I
Sbjct: 111 IYDDDDQQSLI 121
[220][TOP]
>UniRef100_Q3J4N8 ATP-dependent DNA helicase, Rep family n=1 Tax=Rhodobacter
sphaeroides 2.4.1 RepID=Q3J4N8_RHOS4
Length = 783
Score = 80.9 bits (198), Expect = 5e-14
Identities = 49/132 (37%), Positives = 74/132 (56%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ LN Q AAV + G V + AG G+GKT+ L AR++ L+ RP +I +T
Sbjct: 25 PRPYIDELNPAQRAAVLALD-GPVLMLAGAGTGKTKALTARIVHLLDSGKARPNEILAVT 83
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG +GTFH++S ++LR+H +LV GL
Sbjct: 84 FTNKAAREMKDRVARLLGQVEGMP-WMGTFHAISVKILRRHAELV-------------GL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[221][TOP]
>UniRef100_B9KNI2 ATP-dependent DNA helicase, Rep family n=1 Tax=Rhodobacter
sphaeroides KD131 RepID=B9KNI2_RHOSK
Length = 786
Score = 80.9 bits (198), Expect = 5e-14
Identities = 49/132 (37%), Positives = 74/132 (56%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ LN Q AAV + G V + AG G+GKT+ L AR++ L+ RP +I +T
Sbjct: 28 PRPYIDELNPAQRAAVLALD-GPVLMLAGAGTGKTKALTARIVHLLDSGKARPNEILAVT 86
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG +GTFH++S ++LR+H +LV GL
Sbjct: 87 FTNKAAREMKDRVARLLGQVEGMP-WMGTFHAISVKILRRHAELV-------------GL 132
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 133 KSNFTILDTDDQ 144
[222][TOP]
>UniRef100_B0KR78 UvrD/REP helicase n=1 Tax=Pseudomonas putida GB-1
RepID=B0KR78_PSEPG
Length = 728
Score = 80.9 bits (198), Expect = 5e-14
Identities = 54/133 (40%), Positives = 73/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV + G V AG GSGKTR LV R+ L+QV P I +TFT KA
Sbjct: 11 NSLNDAQRQAVA-ATLGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSILSVTFTNKA 69
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R+R+ LG A + +GTFH L+ RLLR H+Q A L ++F+
Sbjct: 70 AAEMRQRIEQLLGINPA-GMWVGTFHGLAHRLLRAHWQ-------------EARLVQNFQ 115
Query: 477 VLEEDEQSAVIIR 515
+L+ D+Q +I R
Sbjct: 116 ILDSDDQQRLIKR 128
[223][TOP]
>UniRef100_A5WB68 ATP-dependent DNA helicase UvrD n=1 Tax=Pseudomonas putida F1
RepID=A5WB68_PSEP1
Length = 728
Score = 80.9 bits (198), Expect = 5e-14
Identities = 54/133 (40%), Positives = 73/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV + G V AG GSGKTR LV R+ L+QV P I +TFT KA
Sbjct: 11 NSLNDAQRQAVA-ATLGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSILSVTFTNKA 69
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R+R+ LG A + +GTFH L+ RLLR H+Q A L ++F+
Sbjct: 70 AAEMRQRIEQLLGINPA-GMWVGTFHGLAHRLLRAHWQ-------------EARLVQNFQ 115
Query: 477 VLEEDEQSAVIIR 515
+L+ D+Q +I R
Sbjct: 116 ILDSDDQQRLIKR 128
[224][TOP]
>UniRef100_A5FQD9 UvrD/REP helicase n=1 Tax=Dehalococcoides sp. BAV1
RepID=A5FQD9_DEHSB
Length = 738
Score = 80.9 bits (198), Expect = 5e-14
Identities = 51/131 (38%), Positives = 76/131 (58%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+GLN Q AV+ V G V + AGPGSGKTR + R+ L++V + P +I +TFT KA
Sbjct: 6 TGLNPAQKKAVEAVE-GPVLILAGPGSGKTRVITHRIAYLIKVVGITPHRIMAVTFTNKA 64
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+ RL + L +A + +GTFH++ AR+LRQ G L G+ DF
Sbjct: 65 AREMETRL-NQLAPSAVGRLTMGTFHAICARILRQ------------DGLPL-GVPSDFV 110
Query: 477 VLEEDEQSAVI 509
+ ++D+Q ++I
Sbjct: 111 IYDDDDQQSLI 121
[225][TOP]
>UniRef100_A3PHR1 ATP-dependent DNA helicase, Rep family n=1 Tax=Rhodobacter
sphaeroides ATCC 17029 RepID=A3PHR1_RHOS1
Length = 786
Score = 80.9 bits (198), Expect = 5e-14
Identities = 49/132 (37%), Positives = 74/132 (56%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ LN Q AAV + G V + AG G+GKT+ L AR++ L+ RP +I +T
Sbjct: 28 PRPYIDELNPAQRAAVLALD-GPVLMLAGAGTGKTKALTARIVHLLDSGKARPNEILAVT 86
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG +GTFH++S ++LR+H +LV GL
Sbjct: 87 FTNKAAREMKDRVARLLGQVEGMP-WMGTFHAISVKILRRHAELV-------------GL 132
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 133 KSNFTILDTDDQ 144
[226][TOP]
>UniRef100_A1WZS5 ATP-dependent DNA helicase UvrD n=1 Tax=Halorhodospira halophila
SL1 RepID=A1WZS5_HALHL
Length = 725
Score = 80.9 bits (198), Expect = 5e-14
Identities = 55/131 (41%), Positives = 70/131 (53%)
Frame = +3
Query: 123 LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAAD 302
LN Q AV + G V AG GSGKTR L R LVQV P I +TFT KAA
Sbjct: 10 LNDAQREAVC-LPPGRALVLAGAGSGKTRVLTRRAAYLVQVEGASPFAILAVTFTNKAAG 68
Query: 303 ELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVL 482
E+R R+ + LG A + +GTFH ++ RLLRQH Q AGL + F++L
Sbjct: 69 EMRGRIGELLGIATA-GMWVGTFHGIAHRLLRQHAQ-------------RAGLPEGFQIL 114
Query: 483 EEDEQSAVIIR 515
+ D+Q V+ R
Sbjct: 115 DADDQLRVVKR 125
[227][TOP]
>UniRef100_Q5FE39 DNA helicase II n=1 Tax=Ehrlichia ruminantium str. Welgevonden
RepID=Q5FE39_EHRRW
Length = 639
Score = 80.9 bits (198), Expect = 5e-14
Identities = 45/131 (34%), Positives = 75/131 (57%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN +Q V +++ G + + AG G+GKTRT+ +R+ ++ + P QI +TFT KA
Sbjct: 6 TSLNEDQKKGVTNIN-GPILILAGAGTGKTRTMTSRIAYVLNNNFALPSQILAVTFTNKA 64
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A+E+ R+ + T A + LGTFH+++ ++LRQH + V GL+ DF
Sbjct: 65 ANEMLSRINE---LTCASNIWLGTFHAIATKILRQHAEAV-------------GLKSDFT 108
Query: 477 VLEEDEQSAVI 509
++ D+Q VI
Sbjct: 109 IIGTDDQLQVI 119
[228][TOP]
>UniRef100_Q1M2Q1 Helicase n=1 Tax=Arcanobacterium pyogenes RepID=Q1M2Q1_9ACTO
Length = 868
Score = 80.9 bits (198), Expect = 5e-14
Identities = 46/93 (49%), Positives = 59/93 (63%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN+EQ AV S G + V AG GSGKTR L R+ L+ SVRP +I +TFT KAA
Sbjct: 67 GLNAEQRRAVIH-SGGHLLVVAGAGSGKTRVLTTRIYHLISSGSVRPSEILAITFTNKAA 125
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLR 398
E+R+RL +G T A+ + + TFHS R+LR
Sbjct: 126 KEMRERLESMIGPT-AQRMWISTFHSACVRILR 157
[229][TOP]
>UniRef100_D0CW49 ATP-dependent DNA helicase PcrA n=1 Tax=Silicibacter
lacuscaerulensis ITI-1157 RepID=D0CW49_9RHOB
Length = 800
Score = 80.9 bits (198), Expect = 5e-14
Identities = 48/133 (36%), Positives = 73/133 (54%)
Frame = +3
Query: 99 PPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVL 278
P + + LN Q AV ++ G + + AG G+GKT+ L R+ L+ RP +I +
Sbjct: 25 PEADYLNELNPAQREAV-ELLDGPILMLAGAGTGKTKALTTRIAHLLNTGRARPNEILAV 83
Query: 279 TFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAG 458
TFT KAA E+++R+ LG A LGTFHS+ +LLR+H + LAG
Sbjct: 84 TFTNKAAREMKERVGRLLGQPAEGMPWLGTFHSICVKLLRRH-------------AELAG 130
Query: 459 LRKDFRVLEEDEQ 497
L+ +F +L+ D+Q
Sbjct: 131 LKSNFTILDTDDQ 143
[230][TOP]
>UniRef100_C0CWX3 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme
DSM 15981 RepID=C0CWX3_9CLOT
Length = 1126
Score = 80.9 bits (198), Expect = 5e-14
Identities = 54/130 (41%), Positives = 73/130 (56%), Gaps = 2/130 (1%)
Frame = +3
Query: 18 SPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAG-LVTVSAGPG 194
SPA P SG P ++ LN EQ AV+ SAG V V AGPG
Sbjct: 481 SPAEYVPS--SGPDSDPENLQRAETAASTVHFPLVLNPEQTLAVR--SAGRAVAVIAGPG 536
Query: 195 SGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGA-TAAEEVVLGTF 371
+GKTRTLV R+ L++ V+ QI +TFT KAA+E+R RL + +G A +++ +GTF
Sbjct: 537 TGKTRTLVERISYLLETRRVKQSQITAVTFTNKAAEEMRIRLEEKMGGKQAVKKLQIGTF 596
Query: 372 HSLSARLLRQ 401
HS+ LLR+
Sbjct: 597 HSICFDLLRK 606
[231][TOP]
>UniRef100_B5K795 UvrD/REP helicase n=1 Tax=Octadecabacter antarcticus 238
RepID=B5K795_9RHOB
Length = 837
Score = 80.9 bits (198), Expect = 5e-14
Identities = 54/158 (34%), Positives = 82/158 (51%)
Frame = +3
Query: 24 ARAAPDQQSGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGK 203
A AAPD ++ +P S +PP + GLN Q AV+ ++ G V + AG G+GK
Sbjct: 12 AAAAPDARA----RPSLSQRA-MAPPHVDYFEGLNPAQRQAVETLN-GPVLMLAGAGTGK 65
Query: 204 TRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLGTFHSLS 383
T+ L R+ L+ RP +I +TFT KAA E+ R+ + LGTFH++
Sbjct: 66 TKALTCRIAHLMATGGARPDEILAVTFTNKAAREMMNRIGGLTQGASDGMRWLGTFHAIC 125
Query: 384 ARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQ 497
+LLR+H +LV GL+ +F +L+ D+Q
Sbjct: 126 VKLLRRHAELV-------------GLKSNFTILDTDDQ 150
[232][TOP]
>UniRef100_B0NIX4 Putative uncharacterized protein n=1 Tax=Clostridium scindens ATCC
35704 RepID=B0NIX4_EUBSP
Length = 1064
Score = 80.9 bits (198), Expect = 5e-14
Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 5/149 (3%)
Frame = +3
Query: 48 SGSSGKPHRSHDPPSSPPPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARV 227
S + +P SS P LN EQ AV+ +A V V AGPG+GKT+TL++ +
Sbjct: 452 SAKAKQPEEDGKEQSSGTKLPLSDRLNREQERAVRS-TARTVAVIAGPGTGKTKTLISHI 510
Query: 228 LELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALG-ATAAEEVVLGTFHSLSARLLR-- 398
L L++ V+P +I +TFT +AA ++R+RLR+ALG + +GTFH++ L+
Sbjct: 511 LYLIENRKVKPGEITAVTFTNQAASQMRERLRNALGKKKQIHTMQIGTFHAICLAFLKDQ 570
Query: 399 -QHFQLVDRGAGASGGSRLA-GLRKDFRV 479
+ F ++D G +A GL +++R+
Sbjct: 571 GREFSILDE----EGAQEIARGLIEEYRL 595
[233][TOP]
>UniRef100_A6GG96 UvrD/REP helicase n=1 Tax=Plesiocystis pacifica SIR-1
RepID=A6GG96_9DELT
Length = 693
Score = 80.9 bits (198), Expect = 5e-14
Identities = 47/112 (41%), Positives = 69/112 (61%), Gaps = 9/112 (8%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
S LN Q AV L+ V AG GSGKTR + R+ L+++ +P++I L+FT KA
Sbjct: 4 SSLNPAQREAVLHTEGPLL-VLAGAGSGKTRVITHRIARLMEL-GTQPEEIVALSFTNKA 61
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQ---------HFQLVDRG 425
A+E+R+RL +G A+ +VLGTFHSL AR++R+ FQ++D+G
Sbjct: 62 AEEMRERLAKMVGRAKAKALVLGTFHSLGARMMREDPKGFEVPPRFQILDQG 113
[234][TOP]
>UniRef100_Q4PDX2 Putative uncharacterized protein n=1 Tax=Ustilago maydis
RepID=Q4PDX2_USTMA
Length = 1176
Score = 80.9 bits (198), Expect = 5e-14
Identities = 43/106 (40%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
Frame = +3
Query: 105 PPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELV--QVHSVRPKQIAVL 278
P + L+ Q AA + + AGPGSGKTR L +RV L+ + +RP+ I V+
Sbjct: 40 PAYLESLSPSQYAAATHPPTTCLQILAGPGSGKTRVLTSRVAWLILDPANKLRPEDILVV 99
Query: 279 TFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLV 416
TFT KAA+E++ RL +G + +V+GTFHS+ AR LR++ +L+
Sbjct: 100 TFTNKAANEMKMRLVKLIGKERVDNLVIGTFHSVCARYLRKYGRLI 145
[235][TOP]
>UniRef100_C9ST38 ATP-dependent DNA helicase srs2 n=1 Tax=Verticillium albo-atrum
VaMs.102 RepID=C9ST38_9PEZI
Length = 999
Score = 80.9 bits (198), Expect = 5e-14
Identities = 53/133 (39%), Positives = 76/133 (57%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV SA V + AGPGSGKT TL +RV+ L++ P I V TFT K+
Sbjct: 16 ASLNKAQCRAVTS-SAPTVAILAGPGSGKTHTLTSRVVWLLENAGYHPADIVVATFTVKS 74
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+++R+ ALG +++VLGTFHS++ R L A+ G R+ GL + F
Sbjct: 75 AREMKERIGRALGDGREKKIVLGTFHSIARRYL------------ATYGQRI-GLSQRFG 121
Query: 477 VLEEDEQSAVIIR 515
+ ++ + AVI R
Sbjct: 122 IADDGDSRAVIQR 134
[236][TOP]
>UniRef100_C8V6U5 DNA helicase and DNA-dependent ATPase (Eurofung) n=1
Tax=Aspergillus nidulans FGSC A4 RepID=C8V6U5_EMENI
Length = 997
Score = 80.9 bits (198), Expect = 5e-14
Identities = 52/139 (37%), Positives = 74/139 (53%)
Frame = +3
Query: 99 PPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVL 278
P P GLNS Q AV SA ++ V A PGSGKT+TL +RV L+ RP+ +
Sbjct: 3 PLDPILDGLNSAQRTAVTS-SAPILQVLAPPGSGKTKTLTSRVAYLLAHDGYRPQDVICC 61
Query: 279 TFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAG 458
TFT KA+ E+R+RL +G ++LGTFHS+ R L ++ L+ G
Sbjct: 62 TFTIKASREMRERLAKLVGDHVQSRLILGTFHSICRRYLVRYGHLI-------------G 108
Query: 459 LRKDFRVLEEDEQSAVIIR 515
L+K F + + + A+I R
Sbjct: 109 LQKGFGIADSGDSLAIIRR 127
[237][TOP]
>UniRef100_C5E0S5 ZYRO0G15224p n=1 Tax=Zygosaccharomyces rouxii CBS 732
RepID=C5E0S5_ZYGRC
Length = 1161
Score = 80.9 bits (198), Expect = 5e-14
Identities = 51/133 (38%), Positives = 75/133 (56%), Gaps = 2/133 (1%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
S LN +Q A K V V AGPG+GKT+ L +RV L+ H +RP+ I V TFT KA
Sbjct: 12 SSLNLQQQVAAKYDPDLAVQVIAGPGTGKTKVLTSRVAYLMLHHKIRPQDIIVTTFTNKA 71
Query: 297 ADELRKRLRDALGATA--AEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKD 470
A E+ RL L T+ ++++GTFHS+ R+L ++ G R+ GL KD
Sbjct: 72 AKEMIDRLVSMLRDTSIRVSDLMIGTFHSVCLRILSRY------------GHRI-GLMKD 118
Query: 471 FRVLEEDEQSAVI 509
+R+++E E ++
Sbjct: 119 WRIIDEKEIEVIV 131
[238][TOP]
>UniRef100_A7F5F5 Putative uncharacterized protein n=1 Tax=Sclerotinia sclerotiorum
1980 UF-70 RepID=A7F5F5_SCLS1
Length = 999
Score = 80.9 bits (198), Expect = 5e-14
Identities = 49/132 (37%), Positives = 74/132 (56%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN+ Q AAV A + + AGPGSGKT TL +R L+ ++P I V TFT KAA
Sbjct: 9 GLNASQRAAVSS-QADTLAILAGPGSGKTHTLTSRTAWLLH-QGLQPWNIIVATFTVKAA 66
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+++R+ +G +++LGTFHS++ R L ++ L+ G+RKDF +
Sbjct: 67 REMKERIGKLIGNGTESKLILGTFHSIARRYLARYGHLI-------------GIRKDFGI 113
Query: 480 LEEDEQSAVIIR 515
+ + A+I R
Sbjct: 114 ADSSDSLAIIKR 125
[239][TOP]
>UniRef100_Q6CZH2 DNA helicase II n=1 Tax=Pectobacterium atrosepticum
RepID=Q6CZH2_ERWCT
Length = 720
Score = 80.5 bits (197), Expect = 6e-14
Identities = 53/132 (40%), Positives = 74/132 (56%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN +Q AAV + L+ V AG GSGKTR LV R+ L+ V + P I +TFT KAA
Sbjct: 9 GLNDKQRAAVAAPRSNLL-VLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAVTFTNKAA 67
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R R+ +G T+ + +GTFH L+ RLLR H A L +DF++
Sbjct: 68 AEMRHRINHLIG-TSQGGMWIGTFHGLAHRLLRAHHM-------------DANLPQDFQI 113
Query: 480 LEEDEQSAVIIR 515
L+ D+Q ++ R
Sbjct: 114 LDSDDQLRLLKR 125
[240][TOP]
>UniRef100_C1F7R1 ATP-dependent DNA helicase, UvrD/REP family n=1 Tax=Acidobacterium
capsulatum ATCC 51196 RepID=C1F7R1_ACIC5
Length = 943
Score = 80.5 bits (197), Expect = 6e-14
Identities = 47/129 (36%), Positives = 71/129 (55%)
Frame = +3
Query: 123 LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAAD 302
LN +Q A V++V G V + AG GSGKTR + R+ L+Q V P I +TFT KAA
Sbjct: 8 LNPQQRAGVENVD-GPVLILAGAGSGKTRVITHRIAYLIQERGVAPDSILAVTFTNKAAK 66
Query: 303 ELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVL 482
E+ +R+ +G + + VL TFHS R+LR+ + + G GL K F +
Sbjct: 67 EMAERVDALIGHSTLAKPVLATFHSFCVRMLRRDIEALRIGN--------EGLTKTFAIY 118
Query: 483 EEDEQSAVI 509
+E +Q +++
Sbjct: 119 DESDQQSLV 127
[241][TOP]
>UniRef100_B1JFM2 UvrD/REP helicase n=1 Tax=Pseudomonas putida W619
RepID=B1JFM2_PSEPW
Length = 729
Score = 80.5 bits (197), Expect = 6e-14
Identities = 53/133 (39%), Positives = 73/133 (54%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+ LN Q AV + G V AG GSGKTR LV R+ L+QV P I +TFT KA
Sbjct: 11 NSLNDAQRQAVA-ATLGRQLVLAGAGSGKTRVLVHRIAWLIQVEQASPHSILSVTFTNKA 69
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R+R+ LG A + +GTFH L+ RLLR H+Q A L ++F+
Sbjct: 70 AAEMRQRIEQLLGINPA-GMWVGTFHGLAHRLLRAHWQ-------------EARLVQNFQ 115
Query: 477 VLEEDEQSAVIIR 515
+L+ D+Q ++ R
Sbjct: 116 ILDSDDQQRLVKR 128
[242][TOP]
>UniRef100_A7H6H2 UvrD/REP helicase n=1 Tax=Anaeromyxobacter sp. Fw109-5
RepID=A7H6H2_ANADF
Length = 779
Score = 80.5 bits (197), Expect = 6e-14
Identities = 54/139 (38%), Positives = 72/139 (51%)
Frame = +3
Query: 99 PPPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVL 278
PP P GLN Q AV G + V AG GSGKTR +V R+ LV+ V P + +
Sbjct: 3 PPDPLLEGLNDAQREAVLH-GDGPLLVLAGAGSGKTRVIVHRIARLVRDERVMPWHVLAV 61
Query: 279 TFTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAG 458
TFT KAA E++ RL LG T A E+ + TFH+ AR LR+ + AG
Sbjct: 62 TFTNKAAGEMKDRLEALLG-TQASELWVQTFHAFGARFLRRE-------------AARAG 107
Query: 459 LRKDFRVLEEDEQSAVIIR 515
L F + ++D+Q V+ R
Sbjct: 108 LPPSFAIYDDDDQIRVVKR 126
[243][TOP]
>UniRef100_A1UTB0 Putative DNA helicase II n=1 Tax=Bartonella bacilliformis KC583
RepID=A1UTB0_BARBK
Length = 816
Score = 80.5 bits (197), Expect = 6e-14
Identities = 46/124 (37%), Positives = 70/124 (56%)
Frame = +3
Query: 123 LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAAD 302
LN EQ AV + G + V AG G+GKTR L R+ ++ + P+QI +TFT KAA+
Sbjct: 46 LNPEQQQAVINTE-GPILVLAGAGTGKTRVLTTRIAHILHLGLAYPRQILAVTFTNKAAN 104
Query: 303 ELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVL 482
E++ R+ + +G T LGTFHS ++LR+H +LVD L+ +F +L
Sbjct: 105 EMKIRIGELVGKTVEGMPWLGTFHSTGVKILRRHAELVD-------------LKSNFTIL 151
Query: 483 EEDE 494
+ D+
Sbjct: 152 DNDD 155
[244][TOP]
>UniRef100_A0LDC5 ATP-dependent DNA helicase, Rep family n=1 Tax=Magnetococcus sp.
MC-1 RepID=A0LDC5_MAGSM
Length = 673
Score = 80.5 bits (197), Expect = 6e-14
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 3/141 (2%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P HH LN+ Q AV + L+ V AG GSGKTR L R+ ++Q P+++ +T
Sbjct: 4 PTLHH--LNAPQRQAVTTLDGPLM-VLAGAGSGKTRVLTRRLAWIIQQQQASPEEVLAVT 60
Query: 282 FTRKAADELRKRLRDALGATA---AEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRL 452
FT KAA E+R R++ LG A A +GTFH +SAR+LRQ+ DR
Sbjct: 61 FTNKAAKEMRNRVQALLGLDAPAQAHRFWIGTFHGMSARMLRQY---ADR---------- 107
Query: 453 AGLRKDFRVLEEDEQSAVIIR 515
G +DF +L+ +Q + R
Sbjct: 108 LGFERDFTILDSSDQERLFKR 128
[245][TOP]
>UniRef100_Q2BBV3 PcrA n=1 Tax=Bacillus sp. NRRL B-14911 RepID=Q2BBV3_9BACI
Length = 746
Score = 80.5 bits (197), Expect = 6e-14
Identities = 49/131 (37%), Positives = 78/131 (59%)
Frame = +3
Query: 117 SGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKA 296
+GLN++Q AVK + G + + AG GSGKTR L R+ L+ V P I +TFT KA
Sbjct: 10 NGLNAQQQNAVK-ATDGPLLIMAGAGSGKTRVLTHRIGYLMVEKGVNPYNILAITFTNKA 68
Query: 297 ADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFR 476
A E+R+R+++ +G AA+++ + TFHS+ R+LR+ +DR G ++F
Sbjct: 69 AREMRERIQNMMGG-AADDIWISTFHSMCVRILRRD---IDR----------IGFNRNFT 114
Query: 477 VLEEDEQSAVI 509
+L+ +Q +VI
Sbjct: 115 ILDTTDQQSVI 125
[246][TOP]
>UniRef100_Q0FJ57 DNA helicase II, putative n=1 Tax=Roseovarius sp. HTCC2601
RepID=Q0FJ57_9RHOB
Length = 816
Score = 80.5 bits (197), Expect = 6e-14
Identities = 48/132 (36%), Positives = 73/132 (55%)
Frame = +3
Query: 102 PPPHHSGLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLT 281
P P+ LN Q AV+ + G V + AG G+GKT+ L +R++ L+ RP +I +T
Sbjct: 24 PAPYLDDLNPAQREAVERLD-GPVLMLAGAGTGKTKALTSRIVHLLVSGKARPNEILSVT 82
Query: 282 FTRKAADELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGL 461
FT KAA E++ R+ LG LGTFH++ +LLR+H + LAGL
Sbjct: 83 FTNKAAREMKTRVGRLLGQQIEGMPWLGTFHAICVKLLRRH-------------AELAGL 129
Query: 462 RKDFRVLEEDEQ 497
+ +F +L+ D+Q
Sbjct: 130 KSNFTILDTDDQ 141
[247][TOP]
>UniRef100_C6WJG5 UvrD/REP helicase n=1 Tax=Actinosynnema mirum DSM 43827
RepID=C6WJG5_ACTMD
Length = 1001
Score = 80.5 bits (197), Expect = 6e-14
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 3/169 (1%)
Frame = +3
Query: 15 DSPARAAPDQQSGSSGKPHRSHDPPSSPPPPPHH---SGLNSEQLAAVKDVSAGLVTVSA 185
++ R AP Q + + + ++P P P +GL+ +Q AA V G + + A
Sbjct: 433 EAKPRRAPAAQPQDVPEADATAETTAAPTPTPATGLLAGLDPDQRAAA-GVEGGPLLIIA 491
Query: 186 GPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAADELRKRLRDALGATAAEEVVLG 365
GPG+GKTRTL R+ LV V P+Q +TFTR+AA+E+ +R+ AL A + +
Sbjct: 492 GPGTGKTRTLTHRLAHLVVERGVPPEQCLAITFTRRAAEEMTERMA-ALAPAHAPAMTIT 550
Query: 366 TFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVLEEDEQSAVII 512
TFH+L +LR+ V GL + F + + D+Q AV +
Sbjct: 551 TFHALGVLVLREQHDRV-------------GLSRSFGIADPDQQLAVAL 586
[248][TOP]
>UniRef100_C6NC76 DNA helicase II n=1 Tax=Pectobacterium wasabiae WPP163
RepID=C6NC76_9ENTR
Length = 720
Score = 80.5 bits (197), Expect = 6e-14
Identities = 53/132 (40%), Positives = 74/132 (56%)
Frame = +3
Query: 120 GLNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAA 299
GLN +Q AAV + L+ V AG GSGKTR LV R+ L+ V + P I +TFT KAA
Sbjct: 9 GLNDKQRAAVAAPRSNLL-VLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAVTFTNKAA 67
Query: 300 DELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRV 479
E+R R+ +G T+ + +GTFH L+ RLLR H A L +DF++
Sbjct: 68 AEMRHRINHLIG-TSQGGMWIGTFHGLAHRLLRAHHM-------------DANLPQDFQI 113
Query: 480 LEEDEQSAVIIR 515
L+ D+Q ++ R
Sbjct: 114 LDSDDQLRLLKR 125
[249][TOP]
>UniRef100_B4BRC8 ATP-dependent DNA helicase PcrA n=1 Tax=Geobacillus sp. G11MC16
RepID=B4BRC8_9BACI
Length = 724
Score = 80.5 bits (197), Expect = 6e-14
Identities = 52/129 (40%), Positives = 75/129 (58%)
Frame = +3
Query: 123 LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAAD 302
LN EQ AVK + G + + AG GSGKTR L R+ L+ V P I +TFT KAA
Sbjct: 12 LNKEQQEAVK-TTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAAR 70
Query: 303 ELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVL 482
E+R+R++ LG AAE+V + TFHS+ R+LR+ +DR G+ ++F +L
Sbjct: 71 EMRERVQALLGG-AAEDVWISTFHSMCVRILRRD---IDR----------IGINRNFSIL 116
Query: 483 EEDEQSAVI 509
+ +Q +VI
Sbjct: 117 DPTDQLSVI 125
[250][TOP]
>UniRef100_A4GJS3 DNA helicase II n=1 Tax=uncultured marine bacterium HF10_45G01
RepID=A4GJS3_9BACT
Length = 428
Score = 80.5 bits (197), Expect = 6e-14
Identities = 48/129 (37%), Positives = 71/129 (55%)
Frame = +3
Query: 123 LNSEQLAAVKDVSAGLVTVSAGPGSGKTRTLVARVLELVQVHSVRPKQIAVLTFTRKAAD 302
LN Q AV + L+ V AG GSGKT+ L +R+ +++ P QI +TFT KAA
Sbjct: 10 LNDAQKEAVLHLDGPLLIV-AGAGSGKTKVLTSRIANIIKEKKAFPNQILAVTFTNKAAK 68
Query: 303 ELRKRLRDALGATAAEEVVLGTFHSLSARLLRQHFQLVDRGAGASGGSRLAGLRKDFRVL 482
E++ R+ LG+TA LGTFHS+ A+LLR+H + A L +F ++
Sbjct: 69 EMQNRVSKILGSTAVGLSWLGTFHSICAKLLRKH-------------ASAANLNSNFTII 115
Query: 483 EEDEQSAVI 509
+ D+Q +I
Sbjct: 116 DTDDQIRLI 124