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[1][TOP]
>UniRef100_Q5QEB2 Elongation factor Ts n=1 Tax=Chlamydomonas reinhardtii
RepID=Q5QEB2_CHLRE
Length = 1013
Score = 257 bits (657), Expect = 2e-67
Identities = 134/134 (100%), Positives = 134/134 (100%)
Frame = +3
Query: 3 ELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE 182
ELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE
Sbjct: 4 ELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE 63
Query: 183 GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA 362
GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA
Sbjct: 64 GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA 123
Query: 363 EKKRVSLELKSAVA 404
EKKRVSLELKSAVA
Sbjct: 124 EKKRVSLELKSAVA 137
[2][TOP]
>UniRef100_Q5QEB1 Plastid-specific ribosomal protein-7 n=1 Tax=Chlamydomonas
reinhardtii RepID=Q5QEB1_CHLRE
Length = 560
Score = 257 bits (657), Expect = 2e-67
Identities = 134/134 (100%), Positives = 134/134 (100%)
Frame = +3
Query: 3 ELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE 182
ELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE
Sbjct: 4 ELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE 63
Query: 183 GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA 362
GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA
Sbjct: 64 GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA 123
Query: 363 EKKRVSLELKSAVA 404
EKKRVSLELKSAVA
Sbjct: 124 EKKRVSLELKSAVA 137
[3][TOP]
>UniRef100_Q5QEB0 Chloroplast polyprotein of elongation factor Ts n=1
Tax=Chlamydomonas reinhardtii RepID=Q5QEB0_CHLRE
Length = 603
Score = 257 bits (657), Expect = 2e-67
Identities = 134/134 (100%), Positives = 134/134 (100%)
Frame = +3
Query: 3 ELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE 182
ELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE
Sbjct: 4 ELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE 63
Query: 183 GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA 362
GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA
Sbjct: 64 GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA 123
Query: 363 EKKRVSLELKSAVA 404
EKKRVSLELKSAVA
Sbjct: 124 EKKRVSLELKSAVA 137
[4][TOP]
>UniRef100_A8J641 Plastid-specific ribosomal protein 7 n=1 Tax=Chlamydomonas
reinhardtii RepID=A8J641_CHLRE
Length = 560
Score = 257 bits (657), Expect = 2e-67
Identities = 134/134 (100%), Positives = 134/134 (100%)
Frame = +3
Query: 3 ELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE 182
ELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE
Sbjct: 4 ELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE 63
Query: 183 GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA 362
GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA
Sbjct: 64 GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA 123
Query: 363 EKKRVSLELKSAVA 404
EKKRVSLELKSAVA
Sbjct: 124 EKKRVSLELKSAVA 137
[5][TOP]
>UniRef100_A8J639 Polyprotein of PSRP-7 and EF-Ts, splice variant 2 n=1
Tax=Chlamydomonas reinhardtii RepID=A8J639_CHLRE
Length = 603
Score = 257 bits (657), Expect = 2e-67
Identities = 134/134 (100%), Positives = 134/134 (100%)
Frame = +3
Query: 3 ELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE 182
ELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE
Sbjct: 4 ELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE 63
Query: 183 GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA 362
GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA
Sbjct: 64 GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA 123
Query: 363 EKKRVSLELKSAVA 404
EKKRVSLELKSAVA
Sbjct: 124 EKKRVSLELKSAVA 137
[6][TOP]
>UniRef100_A8J637 Elongation factor Ts n=1 Tax=Chlamydomonas reinhardtii
RepID=A8J637_CHLRE
Length = 1013
Score = 257 bits (657), Expect = 2e-67
Identities = 134/134 (100%), Positives = 134/134 (100%)
Frame = +3
Query: 3 ELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE 182
ELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE
Sbjct: 4 ELGRTATVKAHGRSVLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE 63
Query: 183 GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA 362
GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA
Sbjct: 64 GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA 123
Query: 363 EKKRVSLELKSAVA 404
EKKRVSLELKSAVA
Sbjct: 124 EKKRVSLELKSAVA 137
[7][TOP]
>UniRef100_A1APM8 RNA binding S1 domain protein n=1 Tax=Pelobacter propionicus DSM
2379 RepID=A1APM8_PELPD
Length = 723
Score = 85.9 bits (211), Expect = 1e-15
Identities = 42/79 (53%), Positives = 56/79 (70%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ED++EG +G VT V FGAFV+ G + +GLVHIS LA+ F K+ D VQ GQ V V
Sbjct: 642 KIEDLREGMVLQGVVTNVTAFGAFVDIGVHQDGLVHISHLANRFVKSPHDAVQAGQLVRV 701
Query: 342 KVLSVDAEKKRVSLELKSA 398
KVLS D ++KR+SL ++ A
Sbjct: 702 KVLSADPKRKRISLSIREA 720
[8][TOP]
>UniRef100_A1VC50 RNA binding S1 domain protein n=1 Tax=Desulfovibrio vulgaris DP4
RepID=A1VC50_DESVV
Length = 723
Score = 85.5 bits (210), Expect = 2e-15
Identities = 44/97 (45%), Positives = 64/97 (65%)
Frame = +3
Query: 102 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 281
RP+ VFA A K++DV+ G E G VT V +FGAFV+ G + +GLVH+S+L
Sbjct: 627 RPAFEVFAFAEGVN------KVDDVQPGMELPGIVTNVTKFGAFVDIGVHRDGLVHVSQL 680
Query: 282 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
A F ++ +VV PG+KV V+VL VD +++R++L LK
Sbjct: 681 ADRFVRDPAEVVAPGRKVRVRVLDVDRQRERINLTLK 717
[9][TOP]
>UniRef100_Q729V2 S1 RNA binding domain protein n=2 Tax=Desulfovibrio vulgaris
RepID=Q729V2_DESVH
Length = 723
Score = 85.5 bits (210), Expect = 2e-15
Identities = 44/97 (45%), Positives = 64/97 (65%)
Frame = +3
Query: 102 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 281
RP+ VFA A K++DV+ G E G VT V +FGAFV+ G + +GLVH+S+L
Sbjct: 627 RPAFEVFAFAEGVN------KVDDVQPGMELPGIVTNVTKFGAFVDIGVHRDGLVHVSQL 680
Query: 282 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
A F ++ +VV PG+KV V+VL VD +++R++L LK
Sbjct: 681 ADRFVRDPAEVVAPGRKVRVRVLDVDRQRERINLTLK 717
[10][TOP]
>UniRef100_C1N2E8 Elongation factor Ts n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N2E8_9CHLO
Length = 844
Score = 85.5 bits (210), Expect = 2e-15
Identities = 48/112 (42%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Frame = +3
Query: 75 RRQVAFTGVRPSVRVFAEAPAAEQAAKAIKL------EDVKEGSEYEGTVTTVEEFGAFV 236
RR VA V V E P + +K E V G+E++G V V+E+G FV
Sbjct: 29 RRAVALRATVAEVEVSEEKPKPKGKKPFVKKNVTVTDEQVVVGAEFKGVVKRVQEYGCFV 88
Query: 237 NFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
+FGA ++GLVHIS+L GF +N DVV Q+V V + S+DAEK R+SL +K
Sbjct: 89 DFGAKSDGLVHISELKDGFVENVADVVSENQEVQVFIKSIDAEKGRISLTMK 140
Score = 66.2 bits (160), Expect = 1e-09
Identities = 31/90 (34%), Positives = 57/90 (63%)
Frame = +3
Query: 123 AEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKN 302
A+ A+E++ KA++ +K+G+ EG V +++ FGAFV GLVH+++++ +
Sbjct: 167 AKKAASEESMKAVRA--IKKGTTVEGVVKSIQAFGAFVEIAEGVEGLVHVTEMSEDYNVK 224
Query: 303 AKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
+D V G+ V V+VL VD +K ++S++ K
Sbjct: 225 PEDFVTVGETVKVRVLGVDGQKVKLSMKEK 254
[11][TOP]
>UniRef100_Q92DB8 Lin0897 protein n=1 Tax=Listeria innocua RepID=Q92DB8_LISIN
Length = 725
Score = 85.1 bits (209), Expect = 2e-15
Identities = 46/111 (41%), Positives = 64/111 (57%)
Frame = +3
Query: 63 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 242
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 243 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELKS 395
G +GLVHISKL++ F KN DVV G VTV V VD +K R++L +++
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKKNRIALTMRN 719
[12][TOP]
>UniRef100_A0AH17 Complete genome n=1 Tax=Listeria welshimeri serovar 6b str.
SLCC5334 RepID=A0AH17_LISW6
Length = 725
Score = 85.1 bits (209), Expect = 2e-15
Identities = 46/111 (41%), Positives = 64/111 (57%)
Frame = +3
Query: 63 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 242
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 243 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELKS 395
G +GLVHISKL++ F KN DVV G VTV V VD +K R++L +++
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKKNRIALTMRN 719
[13][TOP]
>UniRef100_Q2BJK7 Conserved protein with nucleic acid-binding protein-like domain
(Transcriptional accessory protein) n=1
Tax=Neptuniibacter caesariensis RepID=Q2BJK7_9GAMM
Length = 714
Score = 85.1 bits (209), Expect = 2e-15
Identities = 40/78 (51%), Positives = 58/78 (74%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
+ D++ G EGT++ V FGAFV+ G + +GLVHIS+LA+ F K+ DVV PGQ VTV+
Sbjct: 636 ITDLQVGMRLEGTISNVTNFGAFVDLGVHQDGLVHISQLANKFVKDPHDVVSPGQIVTVR 695
Query: 345 VLSVDAEKKRVSLELKSA 398
VL VD ++KR+SL +++A
Sbjct: 696 VLEVDEKRKRISLTMRTA 713
[14][TOP]
>UniRef100_Q2L128 Transcription accessory protein n=1 Tax=Bordetella avium 197N
RepID=Q2L128_BORA1
Length = 790
Score = 84.7 bits (208), Expect = 3e-15
Identities = 58/140 (41%), Positives = 76/140 (54%), Gaps = 15/140 (10%)
Frame = +3
Query: 18 ATVKAHGRSVLRPVRGPAGRRQVAFTGVR---PSVR-VFAEA------PAAEQAAKAIK- 164
A +KA R ++ G FT R P+VR +FAE P E K
Sbjct: 600 ARIKADVRQIIGQREALKGVSPADFTDERFGLPTVRDIFAELEKPGRDPRPEFKTAQFKE 659
Query: 165 ----LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQK 332
L+D+ G EG VT V FGAFV+ G + +GLVHIS LA F K+ +DVV+ GQ
Sbjct: 660 GVETLKDLHPGMLLEGVVTNVANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVGQT 719
Query: 333 VTVKVLSVDAEKKRVSLELK 392
VTVKVL VD ++KRV+L ++
Sbjct: 720 VTVKVLEVDVQRKRVALTMR 739
[15][TOP]
>UniRef100_UPI0001B44404 hypothetical protein LmonocytFSL_06170 n=1 Tax=Listeria
monocytogenes FSL J2-003 RepID=UPI0001B44404
Length = 725
Score = 84.0 bits (206), Expect = 5e-15
Identities = 46/109 (42%), Positives = 62/109 (56%)
Frame = +3
Query: 63 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 242
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 243 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
G +GLVHISKL++ F KN DVV G VTV V VD +K R++L +
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKKNRIALTM 717
[16][TOP]
>UniRef100_UPI0001B43D06 hypothetical protein LmonocytogFSL_06115 n=1 Tax=Listeria
monocytogenes FSL N1-017 RepID=UPI0001B43D06
Length = 725
Score = 84.0 bits (206), Expect = 5e-15
Identities = 46/109 (42%), Positives = 62/109 (56%)
Frame = +3
Query: 63 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 242
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 243 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
G +GLVHISKL++ F KN DVV G VTV V VD +K R++L +
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKKNRIALTM 717
[17][TOP]
>UniRef100_UPI0001B43B10 hypothetical protein LmonF_10391 n=1 Tax=Listeria monocytogenes FSL
F2-515 RepID=UPI0001B43B10
Length = 301
Score = 84.0 bits (206), Expect = 5e-15
Identities = 46/109 (42%), Positives = 62/109 (56%)
Frame = +3
Query: 63 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 242
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 185 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 244
Query: 243 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
G +GLVHISKL++ F KN DVV G VTV V VD +K R++L +
Sbjct: 245 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKKNRIALTM 293
[18][TOP]
>UniRef100_Q8Y8K3 Lmo0898 protein n=2 Tax=Listeria monocytogenes RepID=Q8Y8K3_LISMO
Length = 725
Score = 84.0 bits (206), Expect = 5e-15
Identities = 46/109 (42%), Positives = 62/109 (56%)
Frame = +3
Query: 63 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 242
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 243 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
G +GLVHISKL++ F KN DVV G VTV V VD +K R++L +
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKKNRIALTM 717
[19][TOP]
>UniRef100_Q721R8 S1 RNA binding domain protein n=1 Tax=Listeria monocytogenes str.
4b F2365 RepID=Q721R8_LISMF
Length = 725
Score = 84.0 bits (206), Expect = 5e-15
Identities = 46/109 (42%), Positives = 62/109 (56%)
Frame = +3
Query: 63 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 242
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 243 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
G +GLVHISKL++ F KN DVV G VTV V VD +K R++L +
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKKNRIALTM 717
[20][TOP]
>UniRef100_C6E3L9 RNA binding S1 domain protein n=1 Tax=Geobacter sp. M21
RepID=C6E3L9_GEOSM
Length = 756
Score = 84.0 bits (206), Expect = 5e-15
Identities = 41/80 (51%), Positives = 55/80 (68%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+ + D+KEG +G VT V FGAFV+ G + +GLVH+S+L FTK+ D V+ GQ V
Sbjct: 641 VTIADLKEGMILQGVVTNVAAFGAFVDIGVHQDGLVHVSQLTHRFTKDPNDAVKVGQIVK 700
Query: 339 VKVLSVDAEKKRVSLELKSA 398
VKVLS D E+KR+SL +K A
Sbjct: 701 VKVLSADPERKRISLSIKQA 720
[21][TOP]
>UniRef100_Q4EKE0 S1 RNA binding domain protein n=1 Tax=Listeria monocytogenes str.
4b H7858 RepID=Q4EKE0_LISMO
Length = 725
Score = 84.0 bits (206), Expect = 5e-15
Identities = 46/109 (42%), Positives = 62/109 (56%)
Frame = +3
Query: 63 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 242
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 243 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
G +GLVHISKL++ F KN DVV G VTV V VD +K R++L +
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKKNRIALTM 717
[22][TOP]
>UniRef100_C8KAD9 S1 RNA binding domain-containing protein n=2 Tax=Listeria
monocytogenes RepID=C8KAD9_LISMO
Length = 725
Score = 84.0 bits (206), Expect = 5e-15
Identities = 46/109 (42%), Positives = 62/109 (56%)
Frame = +3
Query: 63 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 242
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 243 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
G +GLVHISKL++ F KN DVV G VTV V VD +K R++L +
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKKNRIALTM 717
[23][TOP]
>UniRef100_C8K102 S1 RNA-binding domain-containing protein n=2 Tax=Listeria
monocytogenes RepID=C8K102_LISMO
Length = 725
Score = 84.0 bits (206), Expect = 5e-15
Identities = 46/109 (42%), Positives = 62/109 (56%)
Frame = +3
Query: 63 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 242
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 243 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
G +GLVHISKL++ F KN DVV G VTV V VD +K R++L +
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKKNRIALTM 717
[24][TOP]
>UniRef100_C8JTR8 S1 RNA binding domain-containing protein n=1 Tax=Listeria
monocytogenes FSL N3-165 RepID=C8JTR8_LISMO
Length = 725
Score = 84.0 bits (206), Expect = 5e-15
Identities = 46/109 (42%), Positives = 62/109 (56%)
Frame = +3
Query: 63 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 242
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 243 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
G +GLVHISKL++ F KN DVV G VTV V VD +K R++L +
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDVVTVWVDEVDTKKNRIALTM 717
[25][TOP]
>UniRef100_UPI0001B41F87 hypothetical protein LmonL_19961 n=1 Tax=Listeria monocytogenes
LO28 RepID=UPI0001B41F87
Length = 105
Score = 83.6 bits (205), Expect = 6e-15
Identities = 43/88 (48%), Positives = 56/88 (63%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E PA I +ED+K+G E +GTV V +FGAFV+ G +GLVHISKL++ F KN
Sbjct: 10 ELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNSFVKNP 69
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
DVV G VTV V VD +K R++L +
Sbjct: 70 MDVVSVGDVVTVWVDEVDTKKNRIALTM 97
[26][TOP]
>UniRef100_B8DG61 Putative uncharacterized protein n=1 Tax=Listeria monocytogenes
HCC23 RepID=B8DG61_LISMH
Length = 725
Score = 83.6 bits (205), Expect = 6e-15
Identities = 46/109 (42%), Positives = 62/109 (56%)
Frame = +3
Query: 63 GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNF 242
G R + + P + E PA I +ED+K+G E +GTV V +FGAFV+
Sbjct: 609 GKETMRDIIDNLIAPGRDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDI 668
Query: 243 GANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
G +GLVHISKL++ F KN DVV G VTV V VD +K R++L +
Sbjct: 669 GVKQDGLVHISKLSNSFVKNPMDVVSVGDIVTVWVDEVDTKKNRIALTM 717
[27][TOP]
>UniRef100_B7X315 RNA binding S1 domain protein n=1 Tax=Comamonas testosteroni KF-1
RepID=B7X315_COMTE
Length = 793
Score = 83.6 bits (205), Expect = 6e-15
Identities = 38/76 (50%), Positives = 59/76 (77%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
++D+KEG EGTV+ V +FGAFV+ G + +GLVH+S+++ F ++A++VV+ GQ V VK
Sbjct: 658 IKDLKEGMTLEGTVSNVAQFGAFVDLGVHQDGLVHVSQMSHKFIEDAREVVKTGQIVKVK 717
Query: 345 VLSVDAEKKRVSLELK 392
VL VD ++KR+SL +K
Sbjct: 718 VLEVDVDRKRISLTMK 733
[28][TOP]
>UniRef100_B8I5S2 RNA binding S1 domain protein n=1 Tax=Clostridium cellulolyticum
H10 RepID=B8I5S2_CLOCE
Length = 718
Score = 83.2 bits (204), Expect = 8e-15
Identities = 42/89 (47%), Positives = 57/89 (64%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E P + + +ED+K+G GTV V +FGAFV+ G + +GLVHIS+LA + KN
Sbjct: 627 ELPKPMLHSDVLHMEDLKQGMILTGTVRNVADFGAFVDIGVHQDGLVHISQLADKYVKNP 686
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
DVV G V VK+L VD E+KR+SL +K
Sbjct: 687 MDVVAVGDIVKVKILEVDVERKRISLTMK 715
[29][TOP]
>UniRef100_A6VTC2 RNA binding S1 domain protein n=1 Tax=Marinomonas sp. MWYL1
RepID=A6VTC2_MARMS
Length = 720
Score = 83.2 bits (204), Expect = 8e-15
Identities = 40/75 (53%), Positives = 55/75 (73%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
KLEDV+EG EG VT V FGAFV+ G + +GL+HIS+LA F K+ +D+V+ GQ V V
Sbjct: 642 KLEDVQEGMTLEGVVTNVAAFGAFVDLGVHQDGLIHISQLADRFVKDPRDLVRVGQVVKV 701
Query: 342 KVLSVDAEKKRVSLE 386
VL VD ++KR++L+
Sbjct: 702 TVLEVDVQRKRIALK 716
[30][TOP]
>UniRef100_Q1JW78 RNA binding S1 n=1 Tax=Desulfuromonas acetoxidans DSM 684
RepID=Q1JW78_DESAC
Length = 747
Score = 83.2 bits (204), Expect = 8e-15
Identities = 50/120 (41%), Positives = 69/120 (57%)
Frame = +3
Query: 45 VLRPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEF 224
+L+P R P RRQ R V+ ++ D++ G +G+VT V F
Sbjct: 643 LLKPGRDP--RRQFETASFRDDVQ---------------EMSDLQPGMVLQGSVTNVAAF 685
Query: 225 GAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELKSAVA 404
GAFV+ G + +GLVHIS+LA F KN ++V+ GQ V VKVLSVD +KR+SL +K A A
Sbjct: 686 GAFVDIGVHQDGLVHISELADRFVKNPAEIVKVGQVVHVKVLSVDTTRKRISLSIKQAGA 745
[31][TOP]
>UniRef100_C2KZ93 S1 domain RNA-binding protein n=1 Tax=Oribacterium sinus F0268
RepID=C2KZ93_9FIRM
Length = 753
Score = 83.2 bits (204), Expect = 8e-15
Identities = 43/89 (48%), Positives = 59/89 (66%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
+ PA ++LED+KEG +GTV V +FGAFV+ G + +GLVHIS L+ F K+
Sbjct: 662 DVPAPILREDVLELEDLKEGMVLQGTVRNVIDFGAFVDIGVHQDGLVHISALSKKFVKHP 721
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
DVV+ G V VKVLSVD +K++SL +K
Sbjct: 722 LDVVKLGDIVKVKVLSVDVARKKISLSMK 750
[32][TOP]
>UniRef100_Q65N46 Putative RNA binding protein containing S1 RNA binding domain,YdcI
n=1 Tax=Bacillus licheniformis ATCC 14580
RepID=Q65N46_BACLD
Length = 720
Score = 82.8 bits (203), Expect = 1e-14
Identities = 45/88 (51%), Positives = 55/88 (62%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E P ++LED+KEG E +GTV V +FGAFV+ G +GLVHISKL+ F K+
Sbjct: 629 EVPKPLLKTDVLQLEDLKEGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSHSFVKHP 688
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
DVV G VTV V VDA K RVSL +
Sbjct: 689 LDVVSVGDIVTVWVEDVDAAKGRVSLSM 716
[33][TOP]
>UniRef100_C0E9B9 Putative uncharacterized protein n=1 Tax=Clostridium methylpentosum
DSM 5476 RepID=C0E9B9_9CLOT
Length = 717
Score = 82.8 bits (203), Expect = 1e-14
Identities = 42/89 (47%), Positives = 61/89 (68%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E P + ++L+D+K G E +GTV V +FGAFV+ G + +GLVH+S+LA+ F K+
Sbjct: 622 ELPKPLLRSDVLELKDLKPGMELKGTVRNVIDFGAFVDIGVHEDGLVHVSQLANRFVKHP 681
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
DVV+ G VTV VL VD ++KR+SL +K
Sbjct: 682 LDVVKVGDVVTVWVLDVDLKRKRISLTMK 710
[34][TOP]
>UniRef100_A5ZAL1 Putative uncharacterized protein n=1 Tax=Eubacterium ventriosum
ATCC 27560 RepID=A5ZAL1_9FIRM
Length = 711
Score = 82.8 bits (203), Expect = 1e-14
Identities = 41/89 (46%), Positives = 59/89 (66%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E P + + +D+KEG E +GTV V +FGAFV+ G + +GLVHIS++++ F K+
Sbjct: 622 EMPKPVLKSDVLDFDDLKEGMELKGTVRNVIDFGAFVDIGVHQDGLVHISEMSNKFIKHP 681
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
DVV G V V+VLSVD E+KR+ L +K
Sbjct: 682 LDVVSVGDVVDVRVLSVDKERKRIQLSMK 710
[35][TOP]
>UniRef100_A9U7P4 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U7P4_PHYPA
Length = 398
Score = 82.8 bits (203), Expect = 1e-14
Identities = 44/98 (44%), Positives = 61/98 (62%)
Frame = +3
Query: 102 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 281
RP E P +K+ED+ G E +GTV V +FGAFV+ G ++GLVHIS+L
Sbjct: 296 RPGRDPREELPLPIFRTDVLKIEDLTPGMELQGTVRNVIDFGAFVDIGIKSDGLVHISQL 355
Query: 282 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELKS 395
+SG+ K+ DVV G VTV VL+VD +K RV L +++
Sbjct: 356 SSGYVKHPMDVVSVGDNVTVWVLNVDLKKGRVGLTMRN 393
[36][TOP]
>UniRef100_UPI0001851521 transcription accessory protein n=1 Tax=Bacillus coahuilensis m4-4
RepID=UPI0001851521
Length = 723
Score = 82.4 bits (202), Expect = 1e-14
Identities = 44/79 (55%), Positives = 54/79 (68%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+ G E +GTV V +FGAFV+ G +GLVHISKL GF K+ DVV GQ VT
Sbjct: 640 LKLEDLAVGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLKKGFVKHPLDVVSVGQVVT 699
Query: 339 VKVLSVDAEKKRVSLELKS 395
V V SVD +K RV+L + S
Sbjct: 700 VWVDSVDVQKGRVALTMLS 718
[37][TOP]
>UniRef100_UPI00018506B3 transcription accessory protein n=1 Tax=Bacillus coahuilensis m4-4
RepID=UPI00018506B3
Length = 727
Score = 82.4 bits (202), Expect = 1e-14
Identities = 44/79 (55%), Positives = 54/79 (68%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+ G E +GTV V +FGAFV+ G +GLVHISKL GF K+ DVV GQ VT
Sbjct: 644 LKLEDLAVGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLKKGFVKHPLDVVSVGQVVT 703
Query: 339 VKVLSVDAEKKRVSLELKS 395
V V SVD +K RV+L + S
Sbjct: 704 VWVDSVDVQKGRVALTMLS 722
[38][TOP]
>UniRef100_A9BZV4 RNA binding S1 domain protein n=1 Tax=Delftia acidovorans SPH-1
RepID=A9BZV4_DELAS
Length = 786
Score = 82.4 bits (202), Expect = 1e-14
Identities = 38/76 (50%), Positives = 58/76 (76%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
++D+KEG EGTV+ V +FGAFV+ G + +GLVH+S+++ F ++A++VV+ GQ V VK
Sbjct: 658 IKDLKEGMTLEGTVSNVAQFGAFVDLGVHQDGLVHVSQMSHKFIEDAREVVKTGQIVKVK 717
Query: 345 VLSVDAEKKRVSLELK 392
VL VD +KR+SL +K
Sbjct: 718 VLEVDVARKRISLTMK 733
[39][TOP]
>UniRef100_C7MX99 Transcriptional accessory protein n=1 Tax=Saccharomonospora viridis
DSM 43017 RepID=C7MX99_SACVD
Length = 775
Score = 82.4 bits (202), Expect = 1e-14
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
LED+K G EG VT V FGAFV+ G + +GLVH+S ++ + + +DVV+PG VTVK
Sbjct: 641 LEDLKPGMRLEGVVTNVAAFGAFVDIGVHQDGLVHVSAMSHRYVSDPRDVVKPGDVVTVK 700
Query: 345 VLSVDAEKKRVSLELK 392
VL VD +KR+SL L+
Sbjct: 701 VLDVDVPRKRISLTLR 716
[40][TOP]
>UniRef100_C5T4L5 RNA binding S1 domain protein n=1 Tax=Acidovorax delafieldii 2AN
RepID=C5T4L5_ACIDE
Length = 789
Score = 82.4 bits (202), Expect = 1e-14
Identities = 38/76 (50%), Positives = 56/76 (73%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
++D+KEG EGTV+ V +FGAFV+ G + +GLVH+S+LA F +A++VV+ G V VK
Sbjct: 658 IKDLKEGMVLEGTVSNVAQFGAFVDLGVHQDGLVHVSQLAHKFVNDAREVVKTGDIVKVK 717
Query: 345 VLSVDAEKKRVSLELK 392
V+ VD E+KR+ L +K
Sbjct: 718 VMEVDVERKRIGLSMK 733
[41][TOP]
>UniRef100_UPI000196798C hypothetical protein SUBVAR_02860 n=1 Tax=Subdoligranulum variabile
DSM 15176 RepID=UPI000196798C
Length = 719
Score = 82.0 bits (201), Expect = 2e-14
Identities = 49/127 (38%), Positives = 70/127 (55%), Gaps = 2/127 (1%)
Frame = +3
Query: 18 ATVKAHGRSVLRPVRGPAGR--RQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSE 191
A VKA G L G + +P V P + + LED+K G E
Sbjct: 591 AAVKAKGEKTLCETLGVGAPTLHDIVSELCKPGRDVRDSLPKPLLRSDVMSLEDLKPGME 650
Query: 192 YEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKK 371
GTV V +FGAFV+ G + +GLVHIS++++ F K+ ++V++ G V VKVLSVD KK
Sbjct: 651 LTGTVRNVIDFGAFVDLGVHQDGLVHISQISNRFIKHPREVLKVGDIVKVKVLSVDVAKK 710
Query: 372 RVSLELK 392
R++L +K
Sbjct: 711 RIALTMK 717
[42][TOP]
>UniRef100_B8FHU3 RNA binding S1 domain protein n=1 Tax=Desulfatibacillum
alkenivorans AK-01 RepID=B8FHU3_DESAA
Length = 752
Score = 82.0 bits (201), Expect = 2e-14
Identities = 39/80 (48%), Positives = 56/80 (70%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
+++D++ G E G VT V FGAFV+ G + +GLVHIS+L+ GF KN DVV+ Q+V V
Sbjct: 633 EMKDLEPGMELPGIVTNVTNFGAFVDVGVHQDGLVHISQLSDGFVKNPADVVKVQQRVKV 692
Query: 342 KVLSVDAEKKRVSLELKSAV 401
+VL VD +KR+SL +K +
Sbjct: 693 RVLEVDLPRKRISLSMKKKI 712
[43][TOP]
>UniRef100_B5E861 RNA binding S1 domain protein n=1 Tax=Geobacter bemidjiensis Bem
RepID=B5E861_GEOBB
Length = 754
Score = 82.0 bits (201), Expect = 2e-14
Identities = 39/80 (48%), Positives = 56/80 (70%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+ + D+KEG +G VT V FGAFV+ G + +GLVH+S+L+ FTK+ D V+ G+ V
Sbjct: 639 VTIADLKEGMILQGVVTNVAAFGAFVDIGVHQDGLVHVSQLSHRFTKDPNDAVKVGEIVK 698
Query: 339 VKVLSVDAEKKRVSLELKSA 398
VK+LS D E+KR+SL +K A
Sbjct: 699 VKLLSADPERKRISLSIKQA 718
[44][TOP]
>UniRef100_A9NHV1 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Acholeplasma laidlawii PG-8A
RepID=A9NHV1_ACHLI
Length = 724
Score = 82.0 bits (201), Expect = 2e-14
Identities = 41/77 (53%), Positives = 55/77 (71%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+ +ED+K G E EGTV V +FGAFV+ G +GLVHISKL++ F K+ KDVV GQ VT
Sbjct: 643 LSIEDLKVGMELEGTVRNVTDFGAFVDVGLKNDGLVHISKLSNKFVKHPKDVVSVGQIVT 702
Query: 339 VKVLSVDAEKKRVSLEL 389
V VL++D +K +V L +
Sbjct: 703 VWVLNIDRDKGQVGLTM 719
[45][TOP]
>UniRef100_A7Z1N2 YdcI n=1 Tax=Bacillus amyloliquefaciens FZB42 RepID=A7Z1N2_BACA2
Length = 719
Score = 82.0 bits (201), Expect = 2e-14
Identities = 44/88 (50%), Positives = 56/88 (63%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E P ++LED+KEG E +GTV V +FGAFV+ G +GLVHISKL++ F K+
Sbjct: 630 EVPKPLLKKDVLQLEDLKEGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNQFVKHP 689
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
DVV G VTV V VD +K RVSL +
Sbjct: 690 LDVVSVGDIVTVWVEGVDVQKGRVSLSM 717
[46][TOP]
>UniRef100_C7ICV4 RNA binding S1 domain protein n=1 Tax=Clostridium papyrosolvens DSM
2782 RepID=C7ICV4_9CLOT
Length = 718
Score = 82.0 bits (201), Expect = 2e-14
Identities = 42/89 (47%), Positives = 56/89 (62%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E P + + +ED+K G GTV V +FGAFV+ G + +GLVHIS+LA F KN
Sbjct: 627 ELPKPMLHSDVLNMEDLKAGMILTGTVRNVADFGAFVDIGVHQDGLVHISQLADKFVKNP 686
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
DVV G V VKV+ VD E+KR+SL ++
Sbjct: 687 MDVVAVGDIVKVKVIEVDVERKRISLTMR 715
[47][TOP]
>UniRef100_A4A335 S1 RNA binding domain protein n=1 Tax=Congregibacter litoralis KT71
RepID=A4A335_9GAMM
Length = 792
Score = 82.0 bits (201), Expect = 2e-14
Identities = 42/89 (47%), Positives = 57/89 (64%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E A+ A K+ D+K EGTVT V FGAFV+ G + +GLVHIS +A F K+
Sbjct: 632 EFKTAKLQAGVEKITDLKPDMVLEGTVTNVTSFGAFVDVGVHQDGLVHISAMAEKFVKDP 691
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
+DV + G VTVKV+S+D E+KRV L ++
Sbjct: 692 RDVAKAGDIVTVKVMSIDVERKRVGLSMR 720
[48][TOP]
>UniRef100_Q7WGI8 Transcription accessory protein n=1 Tax=Bordetella bronchiseptica
RepID=Q7WGI8_BORBR
Length = 791
Score = 81.6 bits (200), Expect = 2e-14
Identities = 58/140 (41%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
Frame = +3
Query: 18 ATVKAHGRSVLRPVRGPAGRRQVAFTGVR---PSVR-VFAEA------PAAEQAAKAIK- 164
A +KA R ++ G FT R P+VR +FAE P E K
Sbjct: 600 ARIKADVRHIIGQREALKGVSPSDFTDERFGLPTVRDIFAELEKPGRDPRPEFKTAQFKE 659
Query: 165 ----LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQK 332
L D+ G EG VT V FGAFV+ G + +GLVHIS LA F K+ +DVV+ GQ
Sbjct: 660 GVETLNDLFPGMVLEGVVTNVANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVGQT 719
Query: 333 VTVKVLSVDAEKKRVSLELK 392
VTVKVL VD +KRV+L ++
Sbjct: 720 VTVKVLEVDVARKRVALTMR 739
[49][TOP]
>UniRef100_Q7W5T7 Transcription accessory protein n=1 Tax=Bordetella parapertussis
RepID=Q7W5T7_BORPA
Length = 791
Score = 81.6 bits (200), Expect = 2e-14
Identities = 58/140 (41%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
Frame = +3
Query: 18 ATVKAHGRSVLRPVRGPAGRRQVAFTGVR---PSVR-VFAEA------PAAEQAAKAIK- 164
A +KA R ++ G FT R P+VR +FAE P E K
Sbjct: 600 ARIKADVRHIIGQREALKGVSPSDFTDERFGLPTVRDIFAELEKPGRDPRPEFKTAQFKE 659
Query: 165 ----LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQK 332
L D+ G EG VT V FGAFV+ G + +GLVHIS LA F K+ +DVV+ GQ
Sbjct: 660 GVETLNDLFPGMVLEGVVTNVANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVGQT 719
Query: 333 VTVKVLSVDAEKKRVSLELK 392
VTVKVL VD +KRV+L ++
Sbjct: 720 VTVKVLEVDVARKRVALTMR 739
[50][TOP]
>UniRef100_B8HDI0 RNA binding S1 domain protein n=1 Tax=Arthrobacter chlorophenolicus
A6 RepID=B8HDI0_ARTCA
Length = 830
Score = 81.6 bits (200), Expect = 2e-14
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ D+K G EGTVT V FGAFV+ G + +GLVH+S LA+ F + ++VV+ GQ V V
Sbjct: 656 KISDLKPGMVLEGTVTNVAAFGAFVDVGVHQDGLVHVSALANRFVSDPREVVKSGQVVRV 715
Query: 342 KVLSVDAEKKRVSLELK 392
KVL D E+KR+SL L+
Sbjct: 716 KVLEADPERKRISLTLR 732
[51][TOP]
>UniRef100_A9IIW4 Transcription accessory protein n=1 Tax=Bordetella petrii DSM 12804
RepID=A9IIW4_BORPD
Length = 791
Score = 81.6 bits (200), Expect = 2e-14
Identities = 57/140 (40%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
Frame = +3
Query: 18 ATVKAHGRSVLRPVRGPAGRRQVAFTGVR---PSVR-VFAEA------PAAEQAAKAIK- 164
A +KA + ++ G FT R P+VR +FAE P E K
Sbjct: 600 AKIKADVQQIIGQREALKGVSPADFTDERFGLPTVRDIFAELEKPGRDPRPEFKTAQFKD 659
Query: 165 ----LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQK 332
L D+ G EG VT V FGAFV+ G + +GLVHIS LA F K+ +DVV+ GQ
Sbjct: 660 GVETLNDLYPGMVLEGVVTNVANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVGQT 719
Query: 333 VTVKVLSVDAEKKRVSLELK 392
VTVKVL VD +KRV+L ++
Sbjct: 720 VTVKVLEVDVARKRVALTMR 739
[52][TOP]
>UniRef100_A6CTJ1 YdcI n=1 Tax=Bacillus sp. SG-1 RepID=A6CTJ1_9BACI
Length = 717
Score = 81.6 bits (200), Expect = 2e-14
Identities = 46/97 (47%), Positives = 58/97 (59%)
Frame = +3
Query: 99 VRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISK 278
VRP + E A +KLED++ G E +GTV V +FGAFV+ G +GLVHISK
Sbjct: 618 VRPGRDLRDELSAPLLKKDVLKLEDLQPGMELQGTVRNVVDFGAFVDIGVKQDGLVHISK 677
Query: 279 LASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
L GF K+ DVV G VTV V S D +K RV+L +
Sbjct: 678 LRKGFVKHPLDVVSVGDVVTVWVESADVKKGRVALSM 714
[53][TOP]
>UniRef100_Q45388 Protein tex n=1 Tax=Bordetella pertussis RepID=TEX_BORPE
Length = 791
Score = 81.6 bits (200), Expect = 2e-14
Identities = 58/140 (41%), Positives = 74/140 (52%), Gaps = 15/140 (10%)
Frame = +3
Query: 18 ATVKAHGRSVLRPVRGPAGRRQVAFTGVR---PSVR-VFAEA------PAAEQAAKAIK- 164
A +KA R ++ G FT R P+VR +FAE P E K
Sbjct: 600 ARIKADVRHIIGQREALKGVSPSDFTDERFGLPTVRDIFAELEKPGRDPRPEFKTAQFKE 659
Query: 165 ----LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQK 332
L D+ G EG VT V FGAFV+ G + +GLVHIS LA F K+ +DVV+ GQ
Sbjct: 660 GVETLNDLFPGMVLEGVVTNVANFGAFVDIGVHQDGLVHISALAEKFVKDPRDVVRVGQT 719
Query: 333 VTVKVLSVDAEKKRVSLELK 392
VTVKVL VD +KRV+L ++
Sbjct: 720 VTVKVLEVDVARKRVALTMR 739
[54][TOP]
>UniRef100_UPI0001B54FC8 RNA-binding S1 domain-containing protein n=1 Tax=Streptomyces sp.
AA4 RepID=UPI0001B54FC8
Length = 788
Score = 81.3 bits (199), Expect = 3e-14
Identities = 38/77 (49%), Positives = 52/77 (67%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ D+K G EG VT V FGAF++ G + +GL H+S L+ F K+ +DVV+PG V V
Sbjct: 650 KIADLKPGMRLEGVVTNVAAFGAFIDVGVHQDGLAHVSALSKNFVKDPRDVVKPGDIVKV 709
Query: 342 KVLSVDAEKKRVSLELK 392
KVL VD +KR+SL L+
Sbjct: 710 KVLDVDVPRKRISLTLR 726
[55][TOP]
>UniRef100_UPI0001788115 Tex-like protein protein-like protein n=1 Tax=Geobacillus sp.
Y412MC10 RepID=UPI0001788115
Length = 740
Score = 81.3 bits (199), Expect = 3e-14
Identities = 44/97 (45%), Positives = 59/97 (60%)
Frame = +3
Query: 102 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 281
RP E P +K+ED+ G E +GTV V +FGAFV+ G ++GLVHIS+L
Sbjct: 636 RPGRDPREELPLPIFRQDVLKIEDLVPGMELQGTVRNVIDFGAFVDIGIKSDGLVHISQL 695
Query: 282 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
+ GF K+ DVV G VTV VL+VD +K RV L ++
Sbjct: 696 SDGFVKHPMDVVSVGDNVTVWVLNVDLKKGRVGLTMR 732
[56][TOP]
>UniRef100_Q3A645 Transcriptional accessory protein n=1 Tax=Pelobacter carbinolicus
DSM 2380 RepID=Q3A645_PELCD
Length = 759
Score = 81.3 bits (199), Expect = 3e-14
Identities = 50/116 (43%), Positives = 64/116 (55%)
Frame = +3
Query: 51 RPVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGA 230
+P R P RRQ R VR ++ D+KEG GTVT V FGA
Sbjct: 622 KPGRDP--RRQFETVSFRDDVR---------------EISDLKEGMILSGTVTNVAAFGA 664
Query: 231 FVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELKSA 398
FV+ G + +GLVH+S LA F K+ +VV+ G V VKVLSVDA +KR+ L +K A
Sbjct: 665 FVDIGVHQDGLVHVSHLAHRFVKDPGEVVRVGDIVKVKVLSVDAARKRIGLSIKEA 720
[57][TOP]
>UniRef100_A8FA76 RNA binding transcriptional accessory protein n=1 Tax=Bacillus
pumilus SAFR-032 RepID=A8FA76_BACP2
Length = 719
Score = 81.3 bits (199), Expect = 3e-14
Identities = 44/88 (50%), Positives = 56/88 (63%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E P +KLED+K+G E +GTV V +FGAFV+ G +GLVHISKL++ F K+
Sbjct: 628 EVPKPLLKTDVLKLEDLKQGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNRFVKHP 687
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
DVV G VTV V SVD K RV+L +
Sbjct: 688 LDVVSVGDIVTVWVDSVDQAKGRVALSM 715
[58][TOP]
>UniRef100_A5G3R7 RNA binding S1 domain protein n=1 Tax=Geobacter uraniireducens Rf4
RepID=A5G3R7_GEOUR
Length = 757
Score = 81.3 bits (199), Expect = 3e-14
Identities = 40/79 (50%), Positives = 56/79 (70%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
+L D++EG +GTVT V FGAFV+ G + +GLVH+S LA F K+ + V+ GQ V V
Sbjct: 642 ELGDLQEGMILQGTVTNVTAFGAFVDIGVHQDGLVHVSHLAQRFVKDPNEAVKVGQIVKV 701
Query: 342 KVLSVDAEKKRVSLELKSA 398
KVLSVD ++KR++L +K A
Sbjct: 702 KVLSVDLQRKRIALSIKEA 720
[59][TOP]
>UniRef100_A1W6M2 RNA binding S1 domain protein n=1 Tax=Acidovorax sp. JS42
RepID=A1W6M2_ACISJ
Length = 798
Score = 81.3 bits (199), Expect = 3e-14
Identities = 38/76 (50%), Positives = 57/76 (75%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
+ D++EG EGTV+ V +FGAFV+ G + +GLVH+S+L+ F ++A++VV+ G V VK
Sbjct: 673 IADLREGMVLEGTVSNVAQFGAFVDLGVHQDGLVHVSQLSHKFVQDAREVVKTGDIVKVK 732
Query: 345 VLSVDAEKKRVSLELK 392
VL VDA +KR+SL +K
Sbjct: 733 VLEVDAARKRISLSMK 748
[60][TOP]
>UniRef100_B4AIJ4 Protein YhgF n=1 Tax=Bacillus pumilus ATCC 7061 RepID=B4AIJ4_BACPU
Length = 719
Score = 81.3 bits (199), Expect = 3e-14
Identities = 44/88 (50%), Positives = 56/88 (63%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E P +KLED+K+G E +GTV V +FGAFV+ G +GLVHISKL++ F K+
Sbjct: 628 EVPKPLLKTDVLKLEDLKQGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNRFVKHP 687
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
DVV G VTV V SVD K RV+L +
Sbjct: 688 LDVVSVGDIVTVWVDSVDQAKGRVALSM 715
[61][TOP]
>UniRef100_A8W0E6 Stage II sporulation E family protein n=1 Tax=Bacillus
selenitireducens MLS10 RepID=A8W0E6_9BACI
Length = 724
Score = 81.3 bits (199), Expect = 3e-14
Identities = 40/77 (51%), Positives = 53/77 (68%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+++ED+++G E EGTV V +FGAFV+ G +GLVH+SKL GF KN DVV G VT
Sbjct: 643 LQMEDLEKGMELEGTVRNVVDFGAFVDIGVKQDGLVHVSKLRKGFVKNPMDVVNVGDVVT 702
Query: 339 VKVLSVDAEKKRVSLEL 389
V V SVD K R++L +
Sbjct: 703 VWVDSVDVHKGRIALTM 719
[62][TOP]
>UniRef100_B9MA81 Resolvase RNase H domain protein n=1 Tax=Diaphorobacter sp. TPSY
RepID=B9MA81_DIAST
Length = 798
Score = 80.9 bits (198), Expect = 4e-14
Identities = 38/76 (50%), Positives = 56/76 (73%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
+ D++EG EGTV+ V +FGAFV+ G + +GLVH+S+L+ F +A++VV+ G V VK
Sbjct: 673 IADLREGMVLEGTVSNVAQFGAFVDLGVHQDGLVHVSQLSHKFVNDAREVVKTGDIVKVK 732
Query: 345 VLSVDAEKKRVSLELK 392
VL VDA +KR+SL +K
Sbjct: 733 VLEVDAARKRISLSMK 748
[63][TOP]
>UniRef100_C6J5S2 RNA binding S1 domain-containing protein n=1 Tax=Paenibacillus sp.
oral taxon 786 str. D14 RepID=C6J5S2_9BACL
Length = 743
Score = 80.9 bits (198), Expect = 4e-14
Identities = 43/97 (44%), Positives = 59/97 (60%)
Frame = +3
Query: 102 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 281
RP E P +K+ED+ G E +GTV V +FGAFV+ G +GLVHIS+L
Sbjct: 640 RPGRDPREELPPPIFRTDVLKIEDLVPGMELQGTVRNVIDFGAFVDIGIKNDGLVHISQL 699
Query: 282 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
++G+ K+ DVV G VTV VL+VD +K RV L ++
Sbjct: 700 SNGYVKHPMDVVSVGDNVTVWVLNVDVKKGRVGLTMR 736
[64][TOP]
>UniRef100_B4VGY9 S1 RNA binding domain protein n=1 Tax=Microcoleus chthonoplastes
PCC 7420 RepID=B4VGY9_9CYAN
Length = 718
Score = 80.9 bits (198), Expect = 4e-14
Identities = 39/79 (49%), Positives = 56/79 (70%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ D+K G E EG VT V FGAFV+ G + +GLVHIS+LA F + K++V+ GQ V V
Sbjct: 637 EMSDLKVGMELEGIVTNVANFGAFVDIGVHQDGLVHISQLADRFVDDPKEIVKVGQVVNV 696
Query: 342 KVLSVDAEKKRVSLELKSA 398
+VLSVD + KR+ L +++A
Sbjct: 697 RVLSVDEKLKRIGLSMRAA 715
[65][TOP]
>UniRef100_B0MH09 Putative uncharacterized protein n=1 Tax=Anaerostipes caccae DSM
14662 RepID=B0MH09_9FIRM
Length = 713
Score = 80.9 bits (198), Expect = 4e-14
Identities = 39/80 (48%), Positives = 57/80 (71%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+++ED+KEG + +GTV V +FGAFV+ G + +GLVHIS++A F K+ +VV G V
Sbjct: 634 MEMEDLKEGMKLKGTVRNVIDFGAFVDIGVHQDGLVHISQMADRFVKHPLEVVSVGDVVD 693
Query: 339 VKVLSVDAEKKRVSLELKSA 398
V VLSVD EKKR+ L ++ +
Sbjct: 694 VTVLSVDLEKKRIQLSMRKS 713
[66][TOP]
>UniRef100_O31489 Uncharacterized protein ydcI n=1 Tax=Bacillus subtilis
RepID=YDCI_BACSU
Length = 719
Score = 80.9 bits (198), Expect = 4e-14
Identities = 42/77 (54%), Positives = 54/77 (70%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
++LED+KEG E +GTV V +FGAFV+ G +GLVHISKL++ F K+ DVV G VT
Sbjct: 641 LQLEDLKEGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSNQFVKHPLDVVSVGDIVT 700
Query: 339 VKVLSVDAEKKRVSLEL 389
V V VD +K RVSL +
Sbjct: 701 VWVDGVDVQKGRVSLSM 717
[67][TOP]
>UniRef100_A9F254 Putative uncharacterized protein n=1 Tax=Sorangium cellulosum 'So
ce 56' RepID=A9F254_SORC5
Length = 788
Score = 80.5 bits (197), Expect = 5e-14
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
+ED+K G E EG VT V FGAFV+ G + +GLVH+S+LA F K+ +V + G+K+ V+
Sbjct: 653 MEDLKPGMELEGVVTNVTAFGAFVDIGVHQDGLVHVSQLADRFVKDPNEVAKVGEKIKVR 712
Query: 345 VLSVDAEKKRVSLELKSAVA 404
VL +D +KR+SL K A
Sbjct: 713 VLEIDLVRKRISLTAKKGGA 732
[68][TOP]
>UniRef100_C1P9H9 RNA binding S1 domain protein n=1 Tax=Bacillus coagulans 36D1
RepID=C1P9H9_BACCO
Length = 725
Score = 80.5 bits (197), Expect = 5e-14
Identities = 41/77 (53%), Positives = 53/77 (68%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E +GTV V +FGAFV+ G +GLVHISKL+ GF K+ D+V G VT
Sbjct: 645 MKLEDLKPGMEMQGTVRNVVDFGAFVDVGVKEDGLVHISKLSKGFVKHPLDIVSVGDIVT 704
Query: 339 VKVLSVDAEKKRVSLEL 389
V V VD +K R+SL +
Sbjct: 705 VWVEKVDVQKGRLSLTM 721
[69][TOP]
>UniRef100_UPI0001AEF256 transcription accessory protein n=1 Tax=Streptomyces ghanaensis
ATCC 14672 RepID=UPI0001AEF256
Length = 792
Score = 80.1 bits (196), Expect = 7e-14
Identities = 43/97 (44%), Positives = 58/97 (59%)
Frame = +3
Query: 102 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 281
RP+ R A E K+ D+ G EG VT V FGAFV+ G + +GLVH+S +
Sbjct: 631 RPAFRTAAFKEGVE------KISDLSSGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAM 684
Query: 282 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
+ F K+ +DVV+PG V VKVL VD +KR+SL L+
Sbjct: 685 SKTFVKDPRDVVKPGDIVKVKVLDVDIPRKRISLTLR 721
[70][TOP]
>UniRef100_UPI0001AEDDFE transcriptional accessory protein n=1 Tax=Streptomyces albus J1074
RepID=UPI0001AEDDFE
Length = 807
Score = 80.1 bits (196), Expect = 7e-14
Identities = 38/77 (49%), Positives = 54/77 (70%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
KL D++ G EG VT V FGAFV+ G + +GLVH+S ++ F K+ ++VV+PG V V
Sbjct: 648 KLSDLEAGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSRNFVKDPREVVKPGDIVKV 707
Query: 342 KVLSVDAEKKRVSLELK 392
KV+ VDA +KR+SL L+
Sbjct: 708 KVMEVDAARKRISLTLR 724
[71][TOP]
>UniRef100_UPI00005DC0B2 emb2726 (embryo defective 2726); RNA binding / translation
elongation factor n=1 Tax=Arabidopsis thaliana
RepID=UPI00005DC0B2
Length = 709
Score = 80.1 bits (196), Expect = 7e-14
Identities = 52/144 (36%), Positives = 75/144 (52%), Gaps = 24/144 (16%)
Frame = +3
Query: 33 HGRS-VLRPVRGPAGRRQVAFTGVRPSVRVFAE-----------APAAEQAAK------- 155
HGR VL P R G VA + S V AE APA ++
Sbjct: 62 HGRQFVLHPHRRATGTDVVAAVEEQDSTPVVAEDKETVASEKSDAPAPTSQSRGTARPGR 121
Query: 156 -----AIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQ 320
A+K E++ G+ + G V ++ FGAFV+FGA T+GLVH+S+L+ F K+ VV
Sbjct: 122 KSEMPAVKNEELVPGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDNFVKDVSSVVT 181
Query: 321 PGQKVTVKVLSVDAEKKRVSLELK 392
GQ+V V+++ D E KR+SL ++
Sbjct: 182 IGQEVKVRLVEADIESKRISLTMR 205
[72][TOP]
>UniRef100_Q11LK4 RNA binding S1 n=1 Tax=Chelativorans sp. BNC1 RepID=Q11LK4_MESSB
Length = 772
Score = 80.1 bits (196), Expect = 7e-14
Identities = 38/77 (49%), Positives = 56/77 (72%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
++D+K G EGTVT V FGAFV+ G + +GLVH+S+LA+ F K+A +VV+ G V V+
Sbjct: 644 IKDLKPGMMLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLANRFVKDAHEVVKAGDVVKVR 703
Query: 345 VLSVDAEKKRVSLELKS 395
VL VD ++ R+SL ++S
Sbjct: 704 VLEVDIKRNRISLSMRS 720
[73][TOP]
>UniRef100_Q03E21 Transcriptional accessory protein n=1 Tax=Pediococcus pentosaceus
ATCC 25745 RepID=Q03E21_PEDPA
Length = 722
Score = 80.1 bits (196), Expect = 7e-14
Identities = 43/88 (48%), Positives = 53/88 (60%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E PA + + LED+K G E +GTV V +FGAFV+ G +GLVHISKL GF K
Sbjct: 631 EMPAPLLRSDVLTLEDLKPGMELQGTVRNVIDFGAFVDIGVKQDGLVHISKLKKGFVKQP 690
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
DVV G V V V SVD E+ R+ L +
Sbjct: 691 SDVVAVGDIVKVWVESVDVERHRIQLTM 718
[74][TOP]
>UniRef100_B5ZS43 RNA binding S1 domain protein n=1 Tax=Rhizobium leguminosarum bv.
trifolii WSM2304 RepID=B5ZS43_RHILW
Length = 769
Score = 80.1 bits (196), Expect = 7e-14
Identities = 42/97 (43%), Positives = 61/97 (62%)
Frame = +3
Query: 102 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 281
RPS + A A + + D+K G EGTVT V FGAFV+ G + +GLVH+S+L
Sbjct: 629 RPSFKTAAFAEGVNE------ISDLKPGMMLEGTVTNVAAFGAFVDIGVHQDGLVHVSQL 682
Query: 282 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
A F K+ +VV+ G V V+V+ VDA++KR++L +K
Sbjct: 683 ADRFVKDPHEVVKAGDVVKVRVVEVDAKRKRIALSMK 719
[75][TOP]
>UniRef100_B3E6B1 RNA binding S1 domain protein n=1 Tax=Geobacter lovleyi SZ
RepID=B3E6B1_GEOLS
Length = 762
Score = 80.1 bits (196), Expect = 7e-14
Identities = 38/79 (48%), Positives = 55/79 (69%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ D++EG +G VT V FGAFV+ G + +GLVH+S LA+ F K+ D VQ GQ V V
Sbjct: 642 EISDLQEGMILQGVVTNVTAFGAFVDIGVHQDGLVHVSHLANRFIKDPNDAVQVGQVVKV 701
Query: 342 KVLSVDAEKKRVSLELKSA 398
KVLS D ++KR++L +K +
Sbjct: 702 KVLSADPQRKRIALSIKES 720
[76][TOP]
>UniRef100_A0JTC3 RNA binding S1 domain protein n=1 Tax=Arthrobacter sp. FB24
RepID=A0JTC3_ARTS2
Length = 861
Score = 80.1 bits (196), Expect = 7e-14
Identities = 39/77 (50%), Positives = 54/77 (70%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ D++ G EGTVT V FGAFV+ G + +GLVH+S LA+ F + ++VV+ GQ V V
Sbjct: 685 KISDLRPGMILEGTVTNVAAFGAFVDVGVHQDGLVHVSALANRFVSDPREVVKSGQVVRV 744
Query: 342 KVLSVDAEKKRVSLELK 392
KVL D E+KR+SL L+
Sbjct: 745 KVLEADPERKRISLTLR 761
[77][TOP]
>UniRef100_Q2B4Z6 Transcription accessory protein (S1 RNA binding domain) n=1
Tax=Bacillus sp. NRRL B-14911 RepID=Q2B4Z6_9BACI
Length = 723
Score = 80.1 bits (196), Expect = 7e-14
Identities = 42/79 (53%), Positives = 54/79 (68%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E +GTV V +FGAFV+ G +GLVHISKL F K+ DVV G VT
Sbjct: 643 LKLEDLKPGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLRKQFVKHPLDVVSVGDVVT 702
Query: 339 VKVLSVDAEKKRVSLELKS 395
V V S+D++K RV+L + S
Sbjct: 703 VWVDSIDSQKGRVALTMLS 721
[78][TOP]
>UniRef100_C9AW24 RNA binding protein S1 n=2 Tax=Enterococcus casseliflavus
RepID=C9AW24_ENTCA
Length = 728
Score = 80.1 bits (196), Expect = 7e-14
Identities = 41/88 (46%), Positives = 55/88 (62%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E PA + +ED+K G E +GTV V +FGAFV+ G +GLVH+SKL+ F K+
Sbjct: 634 EMPAPLLRKDVLSMEDLKPGMELKGTVRNVIDFGAFVDIGVKQDGLVHLSKLSRSFVKHP 693
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
KDVV G VTV + VD +K R+SL +
Sbjct: 694 KDVVSVGDVVTVWIEQVDVKKGRISLTM 721
[79][TOP]
>UniRef100_C9A7Y3 RNA binding protein S1 n=1 Tax=Enterococcus casseliflavus EC20
RepID=C9A7Y3_ENTCA
Length = 728
Score = 80.1 bits (196), Expect = 7e-14
Identities = 41/88 (46%), Positives = 55/88 (62%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E PA + +ED+K G E +GTV V +FGAFV+ G +GLVH+SKL+ F K+
Sbjct: 634 EMPAPLLRKDVLSMEDLKPGMELKGTVRNVIDFGAFVDIGVKQDGLVHLSKLSRSFVKHP 693
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
KDVV G VTV + VD +K R+SL +
Sbjct: 694 KDVVSVGDVVTVWIEQVDVKKGRISLTM 721
[80][TOP]
>UniRef100_C7QJM7 RNA binding S1 domain protein n=1 Tax=Catenulispora acidiphila DSM
44928 RepID=C7QJM7_CATAD
Length = 838
Score = 80.1 bits (196), Expect = 7e-14
Identities = 40/77 (51%), Positives = 54/77 (70%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ D++ G EG VT V FGAFV+ G + +GLVHIS L+ F K+ +DVV+PG V V
Sbjct: 653 KIGDLQPGMILEGVVTNVAAFGAFVDVGVHQDGLVHISALSKTFVKDPRDVVKPGDVVRV 712
Query: 342 KVLSVDAEKKRVSLELK 392
KVL VDA +KR++L L+
Sbjct: 713 KVLDVDAVRKRIALTLR 729
[81][TOP]
>UniRef100_Q9SZD6 Elongation factor Ts n=1 Tax=Arabidopsis thaliana
RepID=Q9SZD6_ARATH
Length = 953
Score = 80.1 bits (196), Expect = 7e-14
Identities = 52/144 (36%), Positives = 75/144 (52%), Gaps = 24/144 (16%)
Frame = +3
Query: 33 HGRS-VLRPVRGPAGRRQVAFTGVRPSVRVFAE-----------APAAEQAAK------- 155
HGR VL P R G VA + S V AE APA ++
Sbjct: 62 HGRQFVLHPHRRATGTDVVAAVEEQDSTPVVAEDKETVASEKSDAPAPTSQSRGTARPGR 121
Query: 156 -----AIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQ 320
A+K E++ G+ + G V ++ FGAFV+FGA T+GLVH+S+L+ F K+ VV
Sbjct: 122 KSEMPAVKNEELVPGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDNFVKDVSSVVT 181
Query: 321 PGQKVTVKVLSVDAEKKRVSLELK 392
GQ+V V+++ D E KR+SL ++
Sbjct: 182 IGQEVKVRLVEADIESKRISLTMR 205
[82][TOP]
>UniRef100_Q93ZG6 AT4g29060/F19B15_90 n=1 Tax=Arabidopsis thaliana RepID=Q93ZG6_ARATH
Length = 455
Score = 80.1 bits (196), Expect = 7e-14
Identities = 52/144 (36%), Positives = 75/144 (52%), Gaps = 24/144 (16%)
Frame = +3
Query: 33 HGRS-VLRPVRGPAGRRQVAFTGVRPSVRVFAE-----------APAAEQAAK------- 155
HGR VL P R G VA + S V AE APA ++
Sbjct: 62 HGRQFVLHPHRRATGTDVVAAVEEQDSTPVVAEDKETVASEKSDAPAPTSQSRGTARPGR 121
Query: 156 -----AIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQ 320
A+K E++ G+ + G V ++ FGAFV+FGA T+GLVH+S+L+ F K+ VV
Sbjct: 122 KSEMPAVKNEELVPGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDNFVKDVSSVVT 181
Query: 321 PGQKVTVKVLSVDAEKKRVSLELK 392
GQ+V V+++ D E KR+SL ++
Sbjct: 182 IGQEVKVRLVEADIESKRISLTMR 205
[83][TOP]
>UniRef100_Q5QEA9 Elongation factor Ts n=1 Tax=Arabidopsis thaliana
RepID=Q5QEA9_ARATH
Length = 710
Score = 80.1 bits (196), Expect = 7e-14
Identities = 52/144 (36%), Positives = 75/144 (52%), Gaps = 24/144 (16%)
Frame = +3
Query: 33 HGRS-VLRPVRGPAGRRQVAFTGVRPSVRVFAE-----------APAAEQAAK------- 155
HGR VL P R G VA + S V AE APA ++
Sbjct: 62 HGRQFVLHPHRRATGTDVVAAVEEQDSTPVVAEDKETVASEKSDAPAPTSQSRGTARPGR 121
Query: 156 -----AIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQ 320
A+K E++ G+ + G V ++ FGAFV+FGA T+GLVH+S+L+ F K+ VV
Sbjct: 122 KSEMPAVKNEELVPGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDNFVKDVSSVVT 181
Query: 321 PGQKVTVKVLSVDAEKKRVSLELK 392
GQ+V V+++ D E KR+SL ++
Sbjct: 182 IGQEVKVRLVEADIESKRISLTMR 205
[84][TOP]
>UniRef100_Q0WVD2 Elongation factor Ts (Fragment) n=1 Tax=Arabidopsis thaliana
RepID=Q0WVD2_ARATH
Length = 631
Score = 80.1 bits (196), Expect = 7e-14
Identities = 52/144 (36%), Positives = 75/144 (52%), Gaps = 24/144 (16%)
Frame = +3
Query: 33 HGRS-VLRPVRGPAGRRQVAFTGVRPSVRVFAE-----------APAAEQAAK------- 155
HGR VL P R G VA + S V AE APA ++
Sbjct: 62 HGRQFVLHPHRRATGTDVVAAVEEQDSTPVVAEDKETVASEKSDAPAPTSQSRGTARPGR 121
Query: 156 -----AIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQ 320
A+K E++ G+ + G V ++ FGAFV+FGA T+GLVH+S+L+ F K+ VV
Sbjct: 122 KSEMPAVKNEELVPGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDNFVKDVSSVVT 181
Query: 321 PGQKVTVKVLSVDAEKKRVSLELK 392
GQ+V V+++ D E KR+SL ++
Sbjct: 182 IGQEVKVRLVEADIESKRISLTMR 205
[85][TOP]
>UniRef100_UPI0001AF29A2 putative transcription accessory protein n=1 Tax=Streptomyces
roseosporus NRRL 11379 RepID=UPI0001AF29A2
Length = 771
Score = 79.7 bits (195), Expect = 9e-14
Identities = 39/77 (50%), Positives = 53/77 (68%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
KL D++ G EG VT V FGAFV+ G + +GLVH+S L+ F K+ +DVV+PG V V
Sbjct: 646 KLGDLEPGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSALSKTFVKDPRDVVKPGDIVKV 705
Query: 342 KVLSVDAEKKRVSLELK 392
KV+ VD +KR+SL L+
Sbjct: 706 KVMDVDVPRKRISLTLR 722
[86][TOP]
>UniRef100_Q6F7B6 Putative uncharacterized protein n=1 Tax=Acinetobacter sp. ADP1
RepID=Q6F7B6_ACIAD
Length = 796
Score = 79.7 bits (195), Expect = 9e-14
Identities = 38/77 (49%), Positives = 55/77 (71%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ + EG + EG VT V FGAFV+ G + +GLVHIS+LA+ F + VV+PGQ V V
Sbjct: 647 EIAQLTEGMQLEGVVTNVTNFGAFVDIGVHQDGLVHISELANEFVSDPHKVVKPGQIVQV 706
Query: 342 KVLSVDAEKKRVSLELK 392
+V+ VDAE+KRV+L ++
Sbjct: 707 RVIQVDAERKRVNLSMR 723
[87][TOP]
>UniRef100_B1VTW9 Putative transcription accessory protein n=1 Tax=Streptomyces
griseus subsp. griseus NBRC 13350 RepID=B1VTW9_STRGG
Length = 843
Score = 79.7 bits (195), Expect = 9e-14
Identities = 39/77 (50%), Positives = 53/77 (68%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
KL D++ G EG VT V FGAFV+ G + +GLVH+S L+ F K+ +DVV+PG V V
Sbjct: 679 KLGDLEPGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSALSKTFVKDPRDVVKPGDIVKV 738
Query: 342 KVLSVDAEKKRVSLELK 392
KV+ VD +KR+SL L+
Sbjct: 739 KVMDVDVPRKRISLTLR 755
[88][TOP]
>UniRef100_B1VG79 Putative transcriptional accessory protein n=1 Tax=Corynebacterium
urealyticum DSM 7109 RepID=B1VG79_CORU7
Length = 787
Score = 79.7 bits (195), Expect = 9e-14
Identities = 42/97 (43%), Positives = 59/97 (60%)
Frame = +3
Query: 102 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 281
RPS + + A E K+ DV+ G EGTVT V FGAFV+ G + +GLVH+S +
Sbjct: 624 RPSFKTASLAEGVE------KVSDVRPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSAM 677
Query: 282 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
A F K+ +VV GQ V VKV+ VD +++R+ L L+
Sbjct: 678 ADRFVKDPHEVVHSGQVVKVKVMDVDVDRQRIGLSLR 714
[89][TOP]
>UniRef100_A1R3T9 Putative transcriptional accessory protein n=1 Tax=Arthrobacter
aurescens TC1 RepID=A1R3T9_ARTAT
Length = 818
Score = 79.7 bits (195), Expect = 9e-14
Identities = 38/77 (49%), Positives = 54/77 (70%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ D+K G EGTVT V FGAFV+ G + +GLVH+S L++ F + +++V+ GQ V V
Sbjct: 652 KISDLKPGMILEGTVTNVAAFGAFVDVGVHQDGLVHVSALSNKFVSDPREIVKSGQVVRV 711
Query: 342 KVLSVDAEKKRVSLELK 392
KVL D E+KR+SL L+
Sbjct: 712 KVLEADPERKRISLTLR 728
[90][TOP]
>UniRef100_C6MJY8 RNA binding S1 domain protein n=1 Tax=Geobacter sp. M18
RepID=C6MJY8_9DELT
Length = 756
Score = 79.7 bits (195), Expect = 9e-14
Identities = 38/80 (47%), Positives = 55/80 (68%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+ + D+KEG +G VT V FGAFV+ G + +GLVH+S+L+ + K+ D V+ G+ V
Sbjct: 639 VTIADLKEGMILQGVVTNVAAFGAFVDIGVHQDGLVHVSQLSHRYMKDPNDAVKVGEIVK 698
Query: 339 VKVLSVDAEKKRVSLELKSA 398
VKVLS D E+KR+SL +K A
Sbjct: 699 VKVLSADPERKRISLSIKQA 718
[91][TOP]
>UniRef100_B5D203 Putative uncharacterized protein n=1 Tax=Bacteroides plebeius DSM
17135 RepID=B5D203_9BACE
Length = 712
Score = 79.7 bits (195), Expect = 9e-14
Identities = 38/76 (50%), Positives = 51/76 (67%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
L+D++EG E G VT + FG FV+ G NGLVH+S+LA F N DVV+ Q V VK
Sbjct: 633 LDDLQEGMELPGIVTNITNFGCFVDIGIKENGLVHVSQLADRFVSNPADVVRIHQHVRVK 692
Query: 345 VLSVDAEKKRVSLELK 392
V+S+D E+KR+ L +K
Sbjct: 693 VMSIDHERKRIQLTMK 708
[92][TOP]
>UniRef100_UPI0001B53EE5 transcription accessory protein n=1 Tax=Streptomyces sp. SPB78
RepID=UPI0001B53EE5
Length = 1218
Score = 79.3 bits (194), Expect = 1e-13
Identities = 39/77 (50%), Positives = 53/77 (68%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
KL D++ G EG VT V FGAFV+ G + +GLVH+S L+ F K+ ++VV+PG V V
Sbjct: 626 KLSDLEPGMVLEGVVTNVAAFGAFVDIGVHQDGLVHVSALSREFVKDPREVVKPGDIVKV 685
Query: 342 KVLSVDAEKKRVSLELK 392
KVL VD +KR+SL L+
Sbjct: 686 KVLDVDLPRKRISLTLR 702
[93][TOP]
>UniRef100_UPI0001B4CC56 transcription accessory protein n=1 Tax=Streptomyces griseoflavus
Tu4000 RepID=UPI0001B4CC56
Length = 742
Score = 79.3 bits (194), Expect = 1e-13
Identities = 38/77 (49%), Positives = 52/77 (67%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ D+ G EG VT V FGAFV+ G + +GLVH+S ++ F K+ +DVV+PG V V
Sbjct: 646 KIADLSSGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSKTFVKDPRDVVKPGDIVKV 705
Query: 342 KVLSVDAEKKRVSLELK 392
KVL VD +KR+SL L+
Sbjct: 706 KVLDVDVPRKRISLTLR 722
[94][TOP]
>UniRef100_Q2JGI6 RNA binding S1 n=1 Tax=Frankia sp. CcI3 RepID=Q2JGI6_FRASC
Length = 864
Score = 79.3 bits (194), Expect = 1e-13
Identities = 43/97 (44%), Positives = 58/97 (59%)
Frame = +3
Query: 102 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 281
RP+ R A E A D+ G EGTVT V FGAFV+ G + +GLVH+S +
Sbjct: 641 RPAFRTAAFTEGIETLA------DLVPGMTLEGTVTNVAAFGAFVDIGVHQDGLVHVSAM 694
Query: 282 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
+ F + ++VV+PG VTVKVL VD +KR+SL L+
Sbjct: 695 SKNFVSDPREVVKPGDIVTVKVLDVDIPRKRISLTLR 731
[95][TOP]
>UniRef100_Q1DCH5 S1 RNA binding domain protein n=1 Tax=Myxococcus xanthus DK 1622
RepID=Q1DCH5_MYXXD
Length = 783
Score = 79.3 bits (194), Expect = 1e-13
Identities = 36/77 (46%), Positives = 58/77 (75%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
LEDVKEG +G VT V FGAFV+ G + +GLVH+S++++ F K+ +VV+ G ++TV+
Sbjct: 637 LEDVKEGMVLQGVVTNVTAFGAFVDVGVHQDGLVHVSQISTRFVKDPSEVVKVGDRLTVR 696
Query: 345 VLSVDAEKKRVSLELKS 395
VL+VD +KR++L +++
Sbjct: 697 VLTVDLARKRLALSVRA 713
[96][TOP]
>UniRef100_C1F2W2 S1 RNA binding domain protein n=1 Tax=Acidobacterium capsulatum
ATCC 51196 RepID=C1F2W2_ACIC5
Length = 753
Score = 79.3 bits (194), Expect = 1e-13
Identities = 42/89 (47%), Positives = 60/89 (67%)
Frame = +3
Query: 129 APAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAK 308
AP+ + K I D+KEG EG VT V +FGAFV+ G + +GLVHIS+L++ F K
Sbjct: 631 APSFLEGVKEIT--DLKEGMVLEGVVTNVTKFGAFVDVGVHQDGLVHISELSNRFIKEPS 688
Query: 309 DVVQPGQKVTVKVLSVDAEKKRVSLELKS 395
+ V+ GQ V VKVLS DA+ KR++L +++
Sbjct: 689 EAVKAGQIVRVKVLSADAKTKRIALSMRA 717
[97][TOP]
>UniRef100_B8IV07 RNA binding S1 domain protein n=1 Tax=Methylobacterium nodulans ORS
2060 RepID=B8IV07_METNO
Length = 769
Score = 79.3 bits (194), Expect = 1e-13
Identities = 44/97 (45%), Positives = 58/97 (59%)
Frame = +3
Query: 102 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 281
RPS R E A D+K G EG VT V FGAFV+ G + +GLVHIS L
Sbjct: 630 RPSFRTATFREGVETIA------DLKPGMLLEGVVTNVAAFGAFVDVGVHQDGLVHISAL 683
Query: 282 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
++ F K+ ++VV+PG V VKVL VD +KR+SL ++
Sbjct: 684 SNSFVKDPRNVVKPGDVVKVKVLDVDVPRKRISLTMR 720
[98][TOP]
>UniRef100_A7NJ51 RNA binding S1 domain protein n=1 Tax=Roseiflexus castenholzii DSM
13941 RepID=A7NJ51_ROSCS
Length = 503
Score = 79.3 bits (194), Expect = 1e-13
Identities = 41/79 (51%), Positives = 52/79 (65%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
KL ++ G EGTVT + FG FV+ G +GLVH+S+LA G + A+DVVQ GQ T
Sbjct: 231 KLAALRVGDNVEGTVTGLAPFGVFVDIGVGKDGLVHVSELAEGRVEKAEDVVQVGQTYTF 290
Query: 342 KVLSVDAEKKRVSLELKSA 398
KVL VDAE R+SL L+ A
Sbjct: 291 KVLEVDAEGARISLSLRRA 309
Score = 73.2 bits (178), Expect = 9e-12
Identities = 35/83 (42%), Positives = 55/83 (66%)
Frame = +3
Query: 144 QAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQP 323
+A + KL+ +++G EGT++ + FGAFV+ G +GLVHIS+L++ +D V+
Sbjct: 308 RAQRGQKLQQLEKGQILEGTISGLAPFGAFVDIGVGRDGLVHISELSNARVARVEDAVKV 367
Query: 324 GQKVTVKVLSVDAEKKRVSLELK 392
G KV V+VL VD + KR+SL L+
Sbjct: 368 GDKVQVRVLDVDPQSKRISLSLR 390
Score = 67.8 bits (164), Expect = 4e-10
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Frame = +3
Query: 66 PAGRRQVAFTGVRPSVRVFA---EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFV 236
P G +VA P+ A +APA + +++D+ G E EG VT++ +G FV
Sbjct: 97 PTGSAEVAPEAAAPAGTAEAASYQAPAEAPTGRPRRVKDLAPGMELEGRVTSIALYGIFV 156
Query: 237 NFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
+ G +GLVHIS+++ ++ D+V+ G V V+V SV+ + +R+SL ++
Sbjct: 157 DIGVGRDGLVHISEMSDTRIESPSDLVKIGDTVKVRVKSVEPDGRRISLTMR 208
[99][TOP]
>UniRef100_A1TSP0 RNA binding S1 domain protein n=1 Tax=Acidovorax citrulli AAC00-1
RepID=A1TSP0_ACIAC
Length = 788
Score = 79.3 bits (194), Expect = 1e-13
Identities = 37/76 (48%), Positives = 56/76 (73%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
+ D+KEG EGTV+ V +FGAFV+ G + +GLVH+S+L+ F ++A+++V+ G V VK
Sbjct: 658 IADLKEGMVLEGTVSNVAQFGAFVDLGVHQDGLVHVSQLSHKFVQDAREIVKTGDIVKVK 717
Query: 345 VLSVDAEKKRVSLELK 392
VL VD +KR+SL +K
Sbjct: 718 VLEVDPVRKRISLTMK 733
[100][TOP]
>UniRef100_B4X3W4 S1 RNA binding domain protein n=1 Tax=Alcanivorax sp. DG881
RepID=B4X3W4_9GAMM
Length = 791
Score = 79.3 bits (194), Expect = 1e-13
Identities = 43/92 (46%), Positives = 58/92 (63%), Gaps = 5/92 (5%)
Frame = +3
Query: 132 PAAEQAAKAIK-----LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFT 296
P E A A+K L+D+K+ EGTVT V FGAFV+ G + +GLVH+S LA F
Sbjct: 628 PRPEFKAAALKEGVETLKDLKQSMILEGTVTNVTNFGAFVDIGVHQDGLVHVSALADKFV 687
Query: 297 KNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
++ VV PG V VKVL VD ++KR+SL ++
Sbjct: 688 EDPHQVVAPGDIVKVKVLDVDLDRKRISLTMR 719
[101][TOP]
>UniRef100_B4DC92 RNA binding S1 domain protein n=1 Tax=Chthoniobacter flavus
Ellin428 RepID=B4DC92_9BACT
Length = 770
Score = 79.3 bits (194), Expect = 1e-13
Identities = 38/80 (47%), Positives = 55/80 (68%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ED+K G + G VT V FGAFV+ G + +GLVHIS+++ F KN DV++ GQ+V
Sbjct: 640 KMEDLKVGLKLPGIVTNVTAFGAFVDIGVHQDGLVHISQMSDEFVKNPADVLKVGQRVQA 699
Query: 342 KVLSVDAEKKRVSLELKSAV 401
V+ VD +KR++L LK+ V
Sbjct: 700 TVMEVDMARKRIALSLKTKV 719
[102][TOP]
>UniRef100_UPI0001B4E1EC transcriptional accessory protein n=1 Tax=Streptomyces
viridochromogenes DSM 40736 RepID=UPI0001B4E1EC
Length = 794
Score = 79.0 bits (193), Expect = 2e-13
Identities = 38/77 (49%), Positives = 52/77 (67%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ D+ G EG VT V FGAFV+ G + +GLVH+S ++ F K+ +DVV+PG V V
Sbjct: 649 KISDLSAGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSKTFVKDPRDVVKPGDIVKV 708
Query: 342 KVLSVDAEKKRVSLELK 392
KVL VD +KR+SL L+
Sbjct: 709 KVLDVDIPRKRISLTLR 725
[103][TOP]
>UniRef100_UPI00019083B0 probable transcriptional accessory protein (RNA binding S1 domain)
n=1 Tax=Rhizobium etli CIAT 894 RepID=UPI00019083B0
Length = 195
Score = 79.0 bits (193), Expect = 2e-13
Identities = 37/77 (48%), Positives = 55/77 (71%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+ +VV+ G V V
Sbjct: 103 EISDLKPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKV 162
Query: 342 KVLSVDAEKKRVSLELK 392
+V+ VDA++KR++L +K
Sbjct: 163 RVVEVDAKRKRIALSMK 179
[104][TOP]
>UniRef100_UPI00019042F2 probable transcriptional accessory protein (RNA binding S1 domain)
n=1 Tax=Rhizobium etli Brasil 5 RepID=UPI00019042F2
Length = 187
Score = 79.0 bits (193), Expect = 2e-13
Identities = 37/77 (48%), Positives = 55/77 (71%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+ +VV+ G V V
Sbjct: 61 EISDLKPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKV 120
Query: 342 KVLSVDAEKKRVSLELK 392
+V+ VDA++KR++L +K
Sbjct: 121 RVVEVDAKRKRIALSMK 137
[105][TOP]
>UniRef100_Q8YLP7 Alr5249 protein n=1 Tax=Nostoc sp. PCC 7120 RepID=Q8YLP7_ANASP
Length = 719
Score = 79.0 bits (193), Expect = 2e-13
Identities = 39/78 (50%), Positives = 56/78 (71%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ D++EG E EG VT V FGAFV+ G + +GLVHIS+LA F + K VV+ GQ V V
Sbjct: 639 EITDLQEGMELEGIVTNVANFGAFVDIGVHQDGLVHISQLADRFVDDPKKVVKVGQVVKV 698
Query: 342 KVLSVDAEKKRVSLELKS 395
+VL V+A+ +R+SL +K+
Sbjct: 699 RVLEVNAKLRRISLSMKA 716
[106][TOP]
>UniRef100_Q82MJ1 Putative transcription accessory protein n=1 Tax=Streptomyces
avermitilis RepID=Q82MJ1_STRAW
Length = 810
Score = 79.0 bits (193), Expect = 2e-13
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ D+ G EG VT V FGAFV+ G + +GLVH+S ++ F K+ +DVV+PG V V
Sbjct: 648 KISDLASGMVLEGVVTNVAAFGAFVDIGVHQDGLVHVSAMSKTFVKDPRDVVKPGDIVKV 707
Query: 342 KVLSVDAEKKRVSLELK 392
KVL +D +KR+SL L+
Sbjct: 708 KVLDIDIPRKRISLTLR 724
[107][TOP]
>UniRef100_Q39Z96 RNA binding S1 n=1 Tax=Geobacter metallireducens GS-15
RepID=Q39Z96_GEOMG
Length = 757
Score = 79.0 bits (193), Expect = 2e-13
Identities = 37/80 (46%), Positives = 56/80 (70%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
+L D+KEG +G VT V FGAFV+ G + +GLVH+S L++ F K+ + V+ G+ V V
Sbjct: 642 ELSDLKEGMVLQGVVTNVTAFGAFVDIGVHQDGLVHVSHLSTRFVKDPNEAVRVGEVVKV 701
Query: 342 KVLSVDAEKKRVSLELKSAV 401
KVL+VD +KR+SL ++ A+
Sbjct: 702 KVLAVDVPRKRISLSIREAM 721
[108][TOP]
>UniRef100_Q21CQ2 RNA binding S1 n=1 Tax=Rhodopseudomonas palustris BisB18
RepID=Q21CQ2_RHOPB
Length = 782
Score = 79.0 bits (193), Expect = 2e-13
Identities = 38/76 (50%), Positives = 53/76 (69%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
L+D+K G EG VT V FGAFV+ G + +GLVHIS ++ F K+ ++VV+PG V VK
Sbjct: 647 LKDLKPGMVLEGAVTNVAAFGAFVDIGVHQDGLVHISAMSRSFIKDPREVVKPGDIVKVK 706
Query: 345 VLSVDAEKKRVSLELK 392
VL VD +KR++L L+
Sbjct: 707 VLEVDVARKRIALSLR 722
[109][TOP]
>UniRef100_C6B3G7 RNA binding S1 domain protein n=1 Tax=Rhizobium leguminosarum bv.
trifolii WSM1325 RepID=C6B3G7_RHILS
Length = 769
Score = 79.0 bits (193), Expect = 2e-13
Identities = 37/77 (48%), Positives = 55/77 (71%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+ +VV+ G V V
Sbjct: 643 EISDLKPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKV 702
Query: 342 KVLSVDAEKKRVSLELK 392
+V+ VDA++KR++L +K
Sbjct: 703 RVVEVDAKRKRIALSMK 719
[110][TOP]
>UniRef100_B9JAJ3 RNA-binding domain S1-containing transcriptional regulator n=1
Tax=Agrobacterium radiobacter K84 RepID=B9JAJ3_AGRRK
Length = 769
Score = 79.0 bits (193), Expect = 2e-13
Identities = 37/77 (48%), Positives = 55/77 (71%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+ ++V+ G V V
Sbjct: 643 EISDLKPGMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEIVKAGDVVKV 702
Query: 342 KVLSVDAEKKRVSLELK 392
KV+ VDA++KR+SL ++
Sbjct: 703 KVVDVDAKRKRISLTMR 719
[111][TOP]
>UniRef100_B3PRI3 Probable transcriptional accessory protein (RNA binding S1 domain)
n=1 Tax=Rhizobium etli CIAT 652 RepID=B3PRI3_RHIE6
Length = 769
Score = 79.0 bits (193), Expect = 2e-13
Identities = 37/77 (48%), Positives = 55/77 (71%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+ +VV+ G V V
Sbjct: 643 EISDLKPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKV 702
Query: 342 KVLSVDAEKKRVSLELK 392
+V+ VDA++KR++L +K
Sbjct: 703 RVVEVDAKRKRIALSMK 719
[112][TOP]
>UniRef100_B2IGR3 RNA binding S1 domain protein n=1 Tax=Beijerinckia indica subsp.
indica ATCC 9039 RepID=B2IGR3_BEII9
Length = 766
Score = 79.0 bits (193), Expect = 2e-13
Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 1/134 (0%)
Frame = +3
Query: 6 LGRTATVKAHGRSVLRPVR-GPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKE 182
+G TAT+K+ + R G R + +P E A A ++D+K
Sbjct: 591 MGDTATLKSLNPAQFVDERFGLPTVRDILLELEKPGRDPRPEFKTATFAEGIDDIKDLKP 650
Query: 183 GSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDA 362
G EGTVT V FGAFV+ G + +GLVHIS+LA F K D+V+ G V V+V+ VD
Sbjct: 651 GMTLEGTVTNVTNFGAFVDIGVHQDGLVHISQLADRFVKEPNDLVKAGDVVKVRVVEVDV 710
Query: 363 EKKRVSLELKSAVA 404
++KR++L +++ A
Sbjct: 711 KRKRIALSMRTQEA 724
[113][TOP]
>UniRef100_Q1ZC98 Putative uncharacterized protein n=1 Tax=Psychromonas sp. CNPT3
RepID=Q1ZC98_9GAMM
Length = 723
Score = 79.0 bits (193), Expect = 2e-13
Identities = 37/77 (48%), Positives = 56/77 (72%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ D+ E +G +T V FGAFV+ G + +GL+H+S+LA+ F K+ +VV+ GQ V V
Sbjct: 641 KISDLYTDMEIQGVITNVTSFGAFVDIGVHQDGLIHLSQLANKFVKDPFEVVKTGQIVQV 700
Query: 342 KVLSVDAEKKRVSLELK 392
+VLSVD+E+KR+SL L+
Sbjct: 701 RVLSVDSERKRISLSLR 717
[114][TOP]
>UniRef100_C2Z291 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=2 Tax=Bacillus cereus RepID=C2Z291_BACCE
Length = 722
Score = 79.0 bits (193), Expect = 2e-13
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[115][TOP]
>UniRef100_C2C0H7 S1 domain RNA-binding protein n=1 Tax=Listeria grayi DSM 20601
RepID=C2C0H7_LISGR
Length = 726
Score = 79.0 bits (193), Expect = 2e-13
Identities = 40/75 (53%), Positives = 50/75 (66%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+K+ED+K G E +GTV V +FGAFV+ G +GLVHISKL+ F KN DVV G VT
Sbjct: 642 VKMEDLKPGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLSKQFIKNPMDVVSVGDIVT 701
Query: 339 VKVLSVDAEKKRVSL 383
V V VD K R++L
Sbjct: 702 VWVEEVDLNKNRIAL 716
[116][TOP]
>UniRef100_C1Z9K3 Polyribonucleotide nucleotidyltransferase (Polynucleotide
phosphorylase) n=1 Tax=Planctomyces limnophilus DSM 3776
RepID=C1Z9K3_PLALI
Length = 568
Score = 79.0 bits (193), Expect = 2e-13
Identities = 36/79 (45%), Positives = 56/79 (70%)
Frame = +3
Query: 168 EDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKV 347
E++K G Y GTV+++++FGAF+ +GL HIS+L+ GF KN +VVQ G+K+ VKV
Sbjct: 482 EEIKVGRVYNGTVSSIKDFGAFIEIAPGKDGLCHISELSDGFVKNVNEVVQVGEKIQVKV 541
Query: 348 LSVDAEKKRVSLELKSAVA 404
+++D E+ RV L K+ +A
Sbjct: 542 IAID-EQNRVKLSRKAVLA 559
[117][TOP]
>UniRef100_A7VC71 Putative uncharacterized protein n=1 Tax=Clostridium sp. L2-50
RepID=A7VC71_9CLOT
Length = 716
Score = 79.0 bits (193), Expect = 2e-13
Identities = 40/90 (44%), Positives = 58/90 (64%)
Frame = +3
Query: 123 AEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKN 302
+E P ++++D+KEG +GTV V +FGAFV+ G + +GLVHIS+++ F K+
Sbjct: 623 SEMPQPILRGDILEMKDLKEGMILKGTVRNVIDFGAFVDIGVHQDGLVHISQMSDKFIKH 682
Query: 303 AKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
DVV G VTVKV+ VD KKR+ L +K
Sbjct: 683 PLDVVSVGDIVTVKVMGVDLAKKRIQLTMK 712
[118][TOP]
>UniRef100_A4EBC2 Putative uncharacterized protein n=1 Tax=Collinsella aerofaciens
ATCC 25986 RepID=A4EBC2_9ACTN
Length = 442
Score = 79.0 bits (193), Expect = 2e-13
Identities = 39/88 (44%), Positives = 59/88 (67%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
+AP + A+ ++D++ G E +GTV V +FGAFV+ G + +GLVHISKLA+ F K+
Sbjct: 351 DAPEVVFSRSALSIDDLEPGMELKGTVRNVVDFGAFVDVGVHQDGLVHISKLANRFVKHP 410
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
DVV+ G V V V VD ++K++SL +
Sbjct: 411 SDVVRVGDTVKVWVEKVDRDRKKISLTM 438
[119][TOP]
>UniRef100_Q81IT3 Transcription accessory protein (S1 RNA binding domain) n=1
Tax=Bacillus cereus ATCC 14579 RepID=Q81IT3_BACCR
Length = 724
Score = 78.6 bits (192), Expect = 2e-13
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 644 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 703
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 704 VWVDDIDTKKGRVALSM 720
[120][TOP]
>UniRef100_Q74GL1 S1 RNA binding domain protein n=1 Tax=Geobacter sulfurreducens
RepID=Q74GL1_GEOSL
Length = 761
Score = 78.6 bits (192), Expect = 2e-13
Identities = 38/79 (48%), Positives = 55/79 (69%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ D+KEG +G VT V FGAFV+ G + +GLVH+S L+ F K+ + V+ GQ V V
Sbjct: 643 EIGDLKEGMVLQGVVTNVTAFGAFVDVGVHQDGLVHVSHLSVKFVKDPAEAVRVGQVVQV 702
Query: 342 KVLSVDAEKKRVSLELKSA 398
KVLSVD ++KR+SL ++ A
Sbjct: 703 KVLSVDVQRKRISLSIREA 721
[121][TOP]
>UniRef100_Q3MCX9 RNA binding S1 n=1 Tax=Anabaena variabilis ATCC 29413
RepID=Q3MCX9_ANAVT
Length = 719
Score = 78.6 bits (192), Expect = 2e-13
Identities = 39/78 (50%), Positives = 55/78 (70%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ D++EG E EG VT V FGAFV+ G + +GLVHIS+L F + K VV+ GQ V V
Sbjct: 639 EITDLQEGMELEGIVTNVANFGAFVDIGVHQDGLVHISQLTDRFVDDPKKVVKVGQVVKV 698
Query: 342 KVLSVDAEKKRVSLELKS 395
+VL V+A+ KR+SL +K+
Sbjct: 699 RVLEVNAKLKRISLSMKA 716
[122][TOP]
>UniRef100_Q1WSR3 Transcription accessory protein n=1 Tax=Lactobacillus salivarius
UCC118 RepID=Q1WSR3_LACS1
Length = 723
Score = 78.6 bits (192), Expect = 2e-13
Identities = 38/77 (49%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+K+ED+K G + EGTV V +FGAFV+ G +GLVH+SKL+ + N +DVV GQ VT
Sbjct: 642 LKIEDLKAGMQLEGTVRNVVDFGAFVDIGVKQDGLVHLSKLSKKYVSNPRDVVAVGQIVT 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V VD +KR+ L +
Sbjct: 702 VWVEDVDLNRKRIQLTM 718
[123][TOP]
>UniRef100_B7IU35 S1 RNA binding domain protein n=1 Tax=Bacillus cereus G9842
RepID=B7IU35_BACC2
Length = 722
Score = 78.6 bits (192), Expect = 2e-13
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[124][TOP]
>UniRef100_B7H4P5 S1 RNA binding domain protein n=1 Tax=Bacillus cereus B4264
RepID=B7H4P5_BACC4
Length = 722
Score = 78.6 bits (192), Expect = 2e-13
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[125][TOP]
>UniRef100_C8NGU9 Histidine triad domain-containing protein n=1 Tax=Granulicatella
adiacens ATCC 49175 RepID=C8NGU9_9LACT
Length = 751
Score = 78.6 bits (192), Expect = 2e-13
Identities = 40/77 (51%), Positives = 51/77 (66%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+K+ED++ G E EGTV V +FGAFV+ G +GLVHISKL GF K+ DVV G VT
Sbjct: 667 LKMEDLQVGMELEGTVRNVVDFGAFVDIGVKQDGLVHISKLKKGFVKHPSDVVAVGDIVT 726
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV L +
Sbjct: 727 VWVTELDLKKGRVGLSM 743
[126][TOP]
>UniRef100_C7PIE5 RNA binding S1 domain protein n=1 Tax=Chitinophaga pinensis DSM
2588 RepID=C7PIE5_CHIPD
Length = 760
Score = 78.6 bits (192), Expect = 2e-13
Identities = 43/97 (44%), Positives = 56/97 (57%)
Frame = +3
Query: 102 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 281
+PS E E A K+ED+K G G VT + FGAFV+ G +GLVHIS L
Sbjct: 610 KPSRDPRDEIAIFEYAEGIHKMEDLKVGMTLPGVVTNITNFGAFVDIGVKQDGLVHISHL 669
Query: 282 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
++ F N + V+ QKVTV VL VD +KR+SL +K
Sbjct: 670 SNRFISNPNEAVKLNQKVTVTVLEVDPSRKRISLSMK 706
[127][TOP]
>UniRef100_C4EGE5 Transcriptional accessory protein n=1 Tax=Streptosporangium roseum
DSM 43021 RepID=C4EGE5_STRRS
Length = 797
Score = 78.6 bits (192), Expect = 2e-13
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
KL D+ G EG VT V FGAFV+ G + +GLVH+S L+ F K+ ++VV+PG V V
Sbjct: 636 KLSDLTPGMLLEGVVTNVAAFGAFVDVGVHQDGLVHVSALSHNFVKDPREVVKPGDIVRV 695
Query: 342 KVLSVDAEKKRVSLELK 392
KVL VD +KR+SL L+
Sbjct: 696 KVLDVDIPRKRISLTLR 712
[128][TOP]
>UniRef100_C3IDV7 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus thuringiensis IBL 4222
RepID=C3IDV7_BACTU
Length = 722
Score = 78.6 bits (192), Expect = 2e-13
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[129][TOP]
>UniRef100_C3GVJ8 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1 RepID=C3GVJ8_BACTU
Length = 722
Score = 78.6 bits (192), Expect = 2e-13
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[130][TOP]
>UniRef100_C3DE64 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus thuringiensis serovar sotto
str. T04001 RepID=C3DE64_BACTS
Length = 722
Score = 78.6 bits (192), Expect = 2e-13
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[131][TOP]
>UniRef100_C3CD35 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=4 Tax=Bacillus thuringiensis
RepID=C3CD35_BACTU
Length = 722
Score = 78.6 bits (192), Expect = 2e-13
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[132][TOP]
>UniRef100_C3BEW6 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus pseudomycoides DSM 12442
RepID=C3BEW6_9BACI
Length = 722
Score = 78.6 bits (192), Expect = 2e-13
Identities = 42/77 (54%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V VD +K RV+L +
Sbjct: 702 VWVDDVDMKKGRVALAM 718
[133][TOP]
>UniRef100_C3AGL6 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=2 Tax=Bacillus mycoides RepID=C3AGL6_BACMY
Length = 722
Score = 78.6 bits (192), Expect = 2e-13
Identities = 42/77 (54%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V VD +K RV+L +
Sbjct: 702 VWVDDVDMKKGRVALAM 718
[134][TOP]
>UniRef100_C2Y524 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus AH676 RepID=C2Y524_BACCE
Length = 722
Score = 78.6 bits (192), Expect = 2e-13
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[135][TOP]
>UniRef100_C2SVD2 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=3 Tax=Bacillus cereus group RepID=C2SVD2_BACCE
Length = 722
Score = 78.6 bits (192), Expect = 2e-13
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[136][TOP]
>UniRef100_C2RHI8 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus BDRD-ST24
RepID=C2RHI8_BACCE
Length = 722
Score = 78.6 bits (192), Expect = 2e-13
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSI 718
[137][TOP]
>UniRef100_C2R2J5 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=4 Tax=Bacillus cereus group RepID=C2R2J5_BACCE
Length = 722
Score = 78.6 bits (192), Expect = 2e-13
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[138][TOP]
>UniRef100_C2MVA4 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus ATCC 10876
RepID=C2MVA4_BACCE
Length = 722
Score = 78.6 bits (192), Expect = 2e-13
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[139][TOP]
>UniRef100_C1V3S8 Transcriptional accessory protein n=1 Tax=Haliangium ochraceum DSM
14365 RepID=C1V3S8_9DELT
Length = 801
Score = 78.6 bits (192), Expect = 2e-13
Identities = 37/77 (48%), Positives = 55/77 (71%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
LED+K + EG VT V +FGAFV+ G + +GLVHIS+L+ F K+ ++VV+ G K+ V+
Sbjct: 648 LEDLKPEMQLEGVVTNVTDFGAFVDVGVHQDGLVHISQLSDRFVKDPREVVKVGDKIKVR 707
Query: 345 VLSVDAEKKRVSLELKS 395
VL VD +KR++L +S
Sbjct: 708 VLDVDLARKRIALSARS 724
[140][TOP]
>UniRef100_C0AEY5 RNA binding S1 domain protein (Fragment) n=1 Tax=Opitutaceae
bacterium TAV2 RepID=C0AEY5_9BACT
Length = 788
Score = 78.6 bits (192), Expect = 2e-13
Identities = 37/78 (47%), Positives = 54/78 (69%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K ED+K G + G VT V FGAFV+ G + +GLVH+S+L+ F K+A +VV+PGQKV
Sbjct: 679 KPEDLKPGMKLPGIVTNVTAFGAFVDVGVHQDGLVHVSQLSDTFVKDASEVVKPGQKVRA 738
Query: 342 KVLSVDAEKKRVSLELKS 395
V+ VD + R++L L++
Sbjct: 739 TVIEVDLARNRIALSLRT 756
[141][TOP]
>UniRef100_B5UVX0 S1 RNA binding domain protein n=2 Tax=Bacillus cereus
RepID=B5UVX0_BACCE
Length = 722
Score = 78.6 bits (192), Expect = 2e-13
Identities = 41/77 (53%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[142][TOP]
>UniRef100_Q6LY64 RNA binding S1 n=1 Tax=Methanococcus maripaludis RepID=Q6LY64_METMP
Length = 713
Score = 78.6 bits (192), Expect = 2e-13
Identities = 38/91 (41%), Positives = 58/91 (63%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
+ P + ++LED+KEG +GTV + +FGAF++ G + +GL HIS++A F K+
Sbjct: 622 DLPKPVLRSDVLELEDLKEGMILKGTVRNIVDFGAFIDIGVHHDGLAHISEIADRFIKHP 681
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELKSA 398
DV+ G V V V+ +D +KKRVSL +K A
Sbjct: 682 LDVISVGDIVDVMVMDIDFDKKRVSLSIKRA 712
[143][TOP]
>UniRef100_A9AAH9 RNA binding S1 domain protein n=1 Tax=Methanococcus maripaludis C6
RepID=A9AAH9_METM6
Length = 713
Score = 78.6 bits (192), Expect = 2e-13
Identities = 38/91 (41%), Positives = 58/91 (63%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
+ P + ++LED+KEG +GTV + +FGAF++ G + +GL HIS++A F K+
Sbjct: 622 DLPKPVLRSDVLELEDLKEGMILKGTVRNIVDFGAFIDIGVHHDGLAHISEIADRFIKHP 681
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELKSA 398
DV+ G V V V+ +D +KKRVSL +K A
Sbjct: 682 LDVISVGDIVDVMVMDIDFDKKRVSLSIKRA 712
[144][TOP]
>UniRef100_A4FX43 RNA binding S1 domain protein n=1 Tax=Methanococcus maripaludis C5
RepID=A4FX43_METM5
Length = 713
Score = 78.6 bits (192), Expect = 2e-13
Identities = 38/91 (41%), Positives = 58/91 (63%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
+ P + ++LED+KEG +GTV + +FGAF++ G + +GL HIS++A F K+
Sbjct: 622 DLPKPVLRSDVLELEDLKEGMILKGTVRNIVDFGAFIDIGVHHDGLAHISEIADRFIKHP 681
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELKSA 398
DV+ G V V V+ +D +KKRVSL +K A
Sbjct: 682 LDVISVGDIVDVMVMDIDFDKKRVSLSIKRA 712
[145][TOP]
>UniRef100_UPI0001BB068E Tex-like protein protein-like protein n=1 Tax=Gordonia bronchialis
DSM 43247 RepID=UPI0001BB068E
Length = 815
Score = 78.2 bits (191), Expect = 3e-13
Identities = 40/89 (44%), Positives = 57/89 (64%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E A AA K+ D++ G EG VT V FGAFV+ G + +GLVH+S +A+ F +
Sbjct: 628 EFKTATFAAGIEKVSDLRPGMILEGQVTNVAAFGAFVDVGVHQDGLVHVSAMANRFVSDP 687
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
++VV+ G VTVKV+ VD E+KR+ L L+
Sbjct: 688 REVVKSGDIVTVKVMEVDVERKRIGLSLR 716
[146][TOP]
>UniRef100_UPI0001B4D0A3 transcriptional accessory protein n=1 Tax=Streptomyces lividans
TK24 RepID=UPI0001B4D0A3
Length = 780
Score = 78.2 bits (191), Expect = 3e-13
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ D+ G EG VT V FGAFV+ G + +GLVH+S ++ F K+ +DVV+PG V V
Sbjct: 646 KISDLSSGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSRTFVKDPRDVVKPGDIVKV 705
Query: 342 KVLSVDAEKKRVSLELK 392
KV+ VD +KR+SL L+
Sbjct: 706 KVMDVDIPRKRISLTLR 722
[147][TOP]
>UniRef100_UPI0001B4A059 RNA-binding protein n=1 Tax=Bacteroides sp. 2_1_7
RepID=UPI0001B4A059
Length = 708
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/97 (45%), Positives = 56/97 (57%)
Frame = +3
Query: 102 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 281
R +++VFA P + +ED+KEG G VT + FG FV+ G NGLVHIS+L
Sbjct: 616 RQTIQVFAFDPTVKT------IEDLKEGQVLPGIVTNITNFGCFVDVGIKENGLVHISEL 669
Query: 282 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
A F + VV Q V VKVLSVD +KRV L +K
Sbjct: 670 ADRFVSDPTQVVSIHQHVKVKVLSVDLSRKRVQLSMK 706
[148][TOP]
>UniRef100_UPI0001AF4EAF transcriptional accessory protein Tex n=1 Tax=Mycobacterium
kansasii ATCC 12478 RepID=UPI0001AF4EAF
Length = 753
Score = 78.2 bits (191), Expect = 3e-13
Identities = 39/82 (47%), Positives = 53/82 (64%)
Frame = +3
Query: 147 AAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPG 326
AA K+ D+K G EG VT V FGAFV+ G + +GLVH+S +A F + DVV+ G
Sbjct: 625 AAGVQKIADLKVGMVLEGVVTNVAAFGAFVDIGVHQDGLVHVSAMAERFVADPHDVVRSG 684
Query: 327 QKVTVKVLSVDAEKKRVSLELK 392
Q V VKV+ VD E++R+ L L+
Sbjct: 685 QVVRVKVIDVDVERRRIGLSLR 706
[149][TOP]
>UniRef100_UPI000185BF30 transcriptional accessory protein n=1 Tax=Corynebacterium
amycolatum SK46 RepID=UPI000185BF30
Length = 763
Score = 78.2 bits (191), Expect = 3e-13
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ D++ G EGTVT V FGAFV+ G + +GLVH+S +A GF + +VV+ G+ V V
Sbjct: 641 KISDLQPGMILEGTVTNVAAFGAFVDVGVHQDGLVHVSNMARGFVSDPHEVVRSGEVVKV 700
Query: 342 KVLSVDAEKKRVSLELK 392
KVL VD E+ R+ L L+
Sbjct: 701 KVLDVDVERNRIGLSLR 717
[150][TOP]
>UniRef100_Q9X7P9 Putative transcriptional accessory protein n=1 Tax=Streptomyces
coelicolor RepID=Q9X7P9_STRCO
Length = 780
Score = 78.2 bits (191), Expect = 3e-13
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ D+ G EG VT V FGAFV+ G + +GLVH+S ++ F K+ +DVV+PG V V
Sbjct: 646 KISDLSSGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSRTFVKDPRDVVKPGDIVKV 705
Query: 342 KVLSVDAEKKRVSLELK 392
KV+ VD +KR+SL L+
Sbjct: 706 KVMDVDIPRKRISLTLR 722
[151][TOP]
>UniRef100_Q5YS43 Putative RNA-binding protein n=1 Tax=Nocardia farcinica
RepID=Q5YS43_NOCFA
Length = 783
Score = 78.2 bits (191), Expect = 3e-13
Identities = 40/89 (44%), Positives = 56/89 (62%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E AE AA K+ D+K G EG VT V FGAFV+ G + +GLVH+S ++ F K+
Sbjct: 628 EFKTAEFAAGVEKVADLKPGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSHSFVKDP 687
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
++VV+ G V VKVL VD ++R+ L L+
Sbjct: 688 REVVKSGDVVKVKVLEVDVARQRIGLSLR 716
[152][TOP]
>UniRef100_Q5WJU8 Transcriptional accessory protein n=1 Tax=Bacillus clausii KSM-K16
RepID=Q5WJU8_BACSK
Length = 720
Score = 78.2 bits (191), Expect = 3e-13
Identities = 40/100 (40%), Positives = 62/100 (62%)
Frame = +3
Query: 102 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 281
RP+ E A + +K+ED+++G E +GTV + +FGAFV+ G +GLVH+SKL
Sbjct: 619 RPNRDPRDELAAPQLKQDVLKMEDLEKGMELQGTVRNIVDFGAFVDIGVKQDGLVHVSKL 678
Query: 282 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELKSAV 401
+ + K+ +VV G VTV V VD +K R+SL +K+ +
Sbjct: 679 SDRYIKHPMEVVSIGDVVTVWVEDVDEKKGRISLTMKAPI 718
[153][TOP]
>UniRef100_Q47TS6 RNA binding S1:Resolvase, RNase H-like fold n=1 Tax=Thermobifida
fusca YX RepID=Q47TS6_THEFY
Length = 777
Score = 78.2 bits (191), Expect = 3e-13
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
+ D++ G EG VT V FGAFV+ G + +GLVH+S ++ F K+ +DVV+PG V VK
Sbjct: 646 ITDLEPGMVLEGVVTNVAAFGAFVDVGVHHDGLVHVSAMSKSFVKDPRDVVKPGDIVRVK 705
Query: 345 VLSVDAEKKRVSLELK 392
VL VD +KR+SL L+
Sbjct: 706 VLDVDVRRKRISLTLR 721
[154][TOP]
>UniRef100_Q07UL0 RNA binding S1 domain protein n=1 Tax=Rhodopseudomonas palustris
BisA53 RepID=Q07UL0_RHOP5
Length = 784
Score = 78.2 bits (191), Expect = 3e-13
Identities = 41/86 (47%), Positives = 56/86 (65%)
Frame = +3
Query: 135 AAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDV 314
AAE L+D+K G EG VT V FGAFV+ G + +GLVHIS ++ F K+ ++V
Sbjct: 639 AAEFKEGVETLKDLKVGMILEGAVTNVAAFGAFVDIGVHQDGLVHISAMSKTFIKDPREV 698
Query: 315 VQPGQKVTVKVLSVDAEKKRVSLELK 392
V+PG V VKVL VD +KR++L L+
Sbjct: 699 VKPGDIVKVKVLEVDVARKRIALTLR 724
[155][TOP]
>UniRef100_C6C261 RNA binding S1 domain protein n=1 Tax=Desulfovibrio salexigens DSM
2638 RepID=C6C261_DESAD
Length = 716
Score = 78.2 bits (191), Expect = 3e-13
Identities = 36/79 (45%), Positives = 54/79 (68%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ D++EG G VT V FGAFV+ G + +GLVHIS++A F ++ VV PGQ + V
Sbjct: 636 EVSDLREGMILNGIVTNVTAFGAFVDIGVHQDGLVHISRMADDFVRDPATVVHPGQALKV 695
Query: 342 KVLSVDAEKKRVSLELKSA 398
KVL VD ++KR+SL ++ +
Sbjct: 696 KVLDVDIQRKRISLSMRQS 714
[156][TOP]
>UniRef100_A7GKE9 RNA binding S1 domain protein n=1 Tax=Bacillus cytotoxicus NVH
391-98 RepID=A7GKE9_BACCN
Length = 722
Score = 78.2 bits (191), Expect = 3e-13
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAF++ G +GLVHISKL+ F K+ D+V GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFIDIGVKQDGLVHISKLSKQFVKHPLDIVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V VD +K RV+L +
Sbjct: 702 VWVDDVDMKKGRVALSM 718
[157][TOP]
>UniRef100_Q6SGM3 S1 RNA binding domain protein n=1 Tax=uncultured marine bacterium
463 RepID=Q6SGM3_9BACT
Length = 772
Score = 78.2 bits (191), Expect = 3e-13
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ D++ EGTVT V FGAF++ G + +GLVHIS LA F K+ +DVV+ G V V
Sbjct: 644 KISDLRPDMVLEGTVTNVTNFGAFIDIGVHQDGLVHISALAEKFVKDPRDVVKAGDVVRV 703
Query: 342 KVLSVDAEKKRVSLELK 392
KV+ VDA +KR+ L ++
Sbjct: 704 KVMEVDAPRKRIGLSMR 720
[158][TOP]
>UniRef100_C9BPK0 RNA binding protein S1 n=7 Tax=Enterococcus faecium
RepID=C9BPK0_ENTFC
Length = 726
Score = 78.2 bits (191), Expect = 3e-13
Identities = 42/90 (46%), Positives = 54/90 (60%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E PA + +ED+K G E GTV V +FGAFV+ G +GLVHISKL+ F K+
Sbjct: 633 EMPAPLLRTDVLSMEDLKPGMELTGTVRNVIDFGAFVDIGVKQDGLVHISKLSKKFVKHP 692
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELKS 395
DVV G VTV + VD +K R+SL + S
Sbjct: 693 TDVVSVGDIVTVWIEQVDTKKGRISLTMLS 722
[159][TOP]
>UniRef100_C9B562 RNA binding protein S1 n=1 Tax=Enterococcus faecium 1,231,501
RepID=C9B562_ENTFC
Length = 726
Score = 78.2 bits (191), Expect = 3e-13
Identities = 42/90 (46%), Positives = 54/90 (60%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E PA + +ED+K G E GTV V +FGAFV+ G +GLVHISKL+ F K+
Sbjct: 633 EMPAPLLRTDVLSMEDLKPGMELTGTVRNVIDFGAFVDIGVKQDGLVHISKLSKKFVKHP 692
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELKS 395
DVV G VTV + VD +K R+SL + S
Sbjct: 693 TDVVSVGDIVTVWIEQVDTKKGRISLTMLS 722
[160][TOP]
>UniRef100_C7XAY7 RNA-binding protein n=1 Tax=Parabacteroides sp. D13
RepID=C7XAY7_9PORP
Length = 708
Score = 78.2 bits (191), Expect = 3e-13
Identities = 44/97 (45%), Positives = 56/97 (57%)
Frame = +3
Query: 102 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 281
R +++VFA P + +ED+KEG G VT + FG FV+ G NGLVHIS+L
Sbjct: 616 RQTIQVFAFDPTVKT------IEDLKEGQVLPGIVTNITNFGCFVDVGIKENGLVHISEL 669
Query: 282 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
A F + VV Q V VKVLSVD +KRV L +K
Sbjct: 670 ADRFVSDPTQVVSIHQHVKVKVLSVDLSRKRVQLSMK 706
[161][TOP]
>UniRef100_C6QU16 RNA binding S1 domain protein n=1 Tax=Geobacillus sp. Y4.1MC1
RepID=C6QU16_9BACI
Length = 728
Score = 78.2 bits (191), Expect = 3e-13
Identities = 43/97 (44%), Positives = 58/97 (59%)
Frame = +3
Query: 99 VRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISK 278
VRP E P +K+ED+K+G E EGTV V +FGAFV+ G +GLVHISK
Sbjct: 620 VRPERDPRDELPKPLLRKDILKMEDLKKGMELEGTVRNVVDFGAFVDIGVKQDGLVHISK 679
Query: 279 LASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
L+ + ++ DVV G V V V +VD +K R+SL +
Sbjct: 680 LSKQYVRHPLDVVSVGDVVKVWVDNVDVDKGRISLSM 716
[162][TOP]
>UniRef100_C3A0G0 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus mycoides DSM 2048
RepID=C3A0G0_BACMY
Length = 722
Score = 78.2 bits (191), Expect = 3e-13
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGT+ V +FGAFV+ G +GLVHISKL+ F K+ D+V GQ V
Sbjct: 642 LKLEDLKRGMELEGTIRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDIVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[163][TOP]
>UniRef100_C2XNH9 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus AH603 RepID=C2XNH9_BACCE
Length = 722
Score = 78.2 bits (191), Expect = 3e-13
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGT+ V +FGAFV+ G +GLVHISKL+ F K+ D+V GQ V
Sbjct: 642 LKLEDLKRGMELEGTIRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDIVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[164][TOP]
>UniRef100_A9VQF5 RNA binding S1 domain protein n=2 Tax=Bacillus cereus group
RepID=A9VQF5_BACWK
Length = 722
Score = 78.2 bits (191), Expect = 3e-13
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGT+ V +FGAFV+ G +GLVHISKL+ F K+ D+V GQ V
Sbjct: 642 LKLEDLKRGMELEGTIRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDIVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[165][TOP]
>UniRef100_C2PQA5 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus AH621 RepID=C2PQA5_BACCE
Length = 722
Score = 78.2 bits (191), Expect = 3e-13
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGT+ V +FGAFV+ G +GLVHISKL+ F K+ D+V GQ V
Sbjct: 642 LKLEDLKRGMELEGTIRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDIVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[166][TOP]
>UniRef100_C2HBI6 S1 domain RNA-binding protein n=2 Tax=Enterococcus faecium
RepID=C2HBI6_ENTFC
Length = 726
Score = 78.2 bits (191), Expect = 3e-13
Identities = 42/90 (46%), Positives = 54/90 (60%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E PA + +ED+K G E GTV V +FGAFV+ G +GLVHISKL+ F K+
Sbjct: 633 EMPAPLLRTDVLSMEDLKPGMELTGTVRNVIDFGAFVDIGVKQDGLVHISKLSKKFVKHP 692
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELKS 395
DVV G VTV + VD +K R+SL + S
Sbjct: 693 TDVVSVGDIVTVWIEQVDTKKGRISLTMLS 722
[167][TOP]
>UniRef100_C2AH79 Transcriptional accessory protein n=1 Tax=Thermomonospora curvata
DSM 43183 RepID=C2AH79_THECU
Length = 810
Score = 78.2 bits (191), Expect = 3e-13
Identities = 42/97 (43%), Positives = 59/97 (60%)
Frame = +3
Query: 102 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 281
RP+ + A A E LED+K G EG VT V FGAFV+ G + +GLVHIS +
Sbjct: 657 RPAFKTAAFADGVET------LEDLKPGMVLEGVVTNVAAFGAFVDVGVHQDGLVHISAM 710
Query: 282 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
+ + + ++VV+PG V V+VL VD +KR+SL L+
Sbjct: 711 SKNYVSDPREVVKPGDIVKVRVLDVDIPRKRISLTLR 747
[168][TOP]
>UniRef100_C0UKG5 Transcriptional accessory protein n=1 Tax=Gordonia bronchialis DSM
43247 RepID=C0UKG5_9ACTO
Length = 852
Score = 78.2 bits (191), Expect = 3e-13
Identities = 40/89 (44%), Positives = 57/89 (64%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E A AA K+ D++ G EG VT V FGAFV+ G + +GLVH+S +A+ F +
Sbjct: 665 EFKTATFAAGIEKVSDLRPGMILEGQVTNVAAFGAFVDVGVHQDGLVHVSAMANRFVSDP 724
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
++VV+ G VTVKV+ VD E+KR+ L L+
Sbjct: 725 REVVKSGDIVTVKVMEVDVERKRIGLSLR 753
[169][TOP]
>UniRef100_B7RVW5 S1 RNA binding domain protein n=1 Tax=marine gamma proteobacterium
HTCC2148 RepID=B7RVW5_9GAMM
Length = 772
Score = 78.2 bits (191), Expect = 3e-13
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ D++ EGTVT V FGAF++ G + +GLVHIS LA F K+ +DVV+ G V V
Sbjct: 644 KISDLRPDMVLEGTVTNVTNFGAFIDIGVHQDGLVHISALAEKFVKDPRDVVKAGDVVRV 703
Query: 342 KVLSVDAEKKRVSLELK 392
KV+ VDA +KR+ L ++
Sbjct: 704 KVMEVDAPRKRIGLSMR 720
[170][TOP]
>UniRef100_UPI0001BBAFC1 RNA-binding protein n=1 Tax=Bacteroides sp. 2_1_33B
RepID=UPI0001BBAFC1
Length = 708
Score = 77.8 bits (190), Expect = 4e-13
Identities = 44/97 (45%), Positives = 56/97 (57%)
Frame = +3
Query: 102 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 281
R +++VFA P + +ED+KEG G VT + FG FV+ G NGLVHIS+L
Sbjct: 616 RQTIQVFAFDPMVKT------IEDLKEGQVLPGIVTNITNFGCFVDVGIKENGLVHISEL 669
Query: 282 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
A F + VV Q V VKVLSVD +KRV L +K
Sbjct: 670 ADRFVSDPTQVVSIHQHVKVKVLSVDLSRKRVQLSMK 706
[171][TOP]
>UniRef100_UPI0001BB916D conserved hypothetical protein n=1 Tax=Acinetobacter johnsonii
SH046 RepID=UPI0001BB916D
Length = 788
Score = 77.8 bits (190), Expect = 4e-13
Identities = 38/77 (49%), Positives = 55/77 (71%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ + EG + EG VT V FGAFV+ G + +GLVHIS+LA+ F + VV+PGQ V V
Sbjct: 640 EVAQLTEGMQLEGVVTNVTNFGAFVDVGVHQDGLVHISELANEFVADPHKVVKPGQIVQV 699
Query: 342 KVLSVDAEKKRVSLELK 392
+VL+VDAE+ RV+L ++
Sbjct: 700 RVLTVDAERNRVNLSMR 716
[172][TOP]
>UniRef100_UPI0001B4F31E transcription accessory protein n=1 Tax=Streptomyces hygroscopicus
ATCC 53653 RepID=UPI0001B4F31E
Length = 800
Score = 77.8 bits (190), Expect = 4e-13
Identities = 38/77 (49%), Positives = 52/77 (67%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ D+ G EG VT V FGAFV+ G + +GLVH+S ++ F K+ +DVV+PG V V
Sbjct: 646 KIGDLASGMILEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSKTFVKDPRDVVKPGDIVRV 705
Query: 342 KVLSVDAEKKRVSLELK 392
KVL VD +KR+SL L+
Sbjct: 706 KVLDVDIPRKRISLTLR 722
[173][TOP]
>UniRef100_Q0AXA2 Hydroxymethylbutenyl pyrophosphate reductase n=1 Tax=Syntrophomonas
wolfei subsp. wolfei str. Goettingen RepID=Q0AXA2_SYNWW
Length = 687
Score = 77.8 bits (190), Expect = 4e-13
Identities = 38/81 (46%), Positives = 54/81 (66%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
I +E +EG EGTV + FGAFV A +GLVHIS+LA+ + +DVVQ +K+
Sbjct: 588 IVMEKFQEGDIIEGTVVRIAPFGAFVEIEAGVDGLVHISQLANHRVEKPEDVVQVNEKIK 647
Query: 339 VKVLSVDAEKKRVSLELKSAV 401
+K+LS+D E+KR+ L LK A+
Sbjct: 648 IKILSIDPEEKRIGLSLKEAL 668
Score = 59.7 bits (143), Expect = 1e-07
Identities = 32/87 (36%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Frame = +3
Query: 138 AEQAAKAIKL--EDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKD 311
AE+ AK K E+++EG +G + + ++GAF++ G GL+H+S++A D
Sbjct: 494 AEEKAKQKKQFWEEIEEGQVRKGRIKRLVDYGAFIDLGGY-EGLLHVSEIAHTRIDQPSD 552
Query: 312 VVQPGQKVTVKVLSVDAEKKRVSLELK 392
V+Q G+++ V +L++D EK+RVSL K
Sbjct: 553 VLQEGEEIDVYILALDREKERVSLSRK 579
[174][TOP]
>UniRef100_B9M315 RNA binding S1 domain protein n=1 Tax=Geobacter sp. FRC-32
RepID=B9M315_GEOSF
Length = 756
Score = 77.8 bits (190), Expect = 4e-13
Identities = 37/76 (48%), Positives = 54/76 (71%)
Frame = +3
Query: 171 DVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVL 350
D++EG +GTVT V FGAFV+ G + +GLVH+S L+ F + A + V+ G+ V VKVL
Sbjct: 645 DLQEGMILQGTVTNVAAFGAFVDIGVHQDGLVHVSHLSRRFVREASEAVKVGEIVKVKVL 704
Query: 351 SVDAEKKRVSLELKSA 398
+VD ++KR+SL +K A
Sbjct: 705 AVDLQRKRISLSIKEA 720
[175][TOP]
>UniRef100_B1Y002 RNA binding S1 domain protein n=1 Tax=Leptothrix cholodnii SP-6
RepID=B1Y002_LEPCP
Length = 827
Score = 77.8 bits (190), Expect = 4e-13
Identities = 35/76 (46%), Positives = 56/76 (73%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
++D+ EG EGTV+ V +FGAF++ G + +GLVH+S+L++ F +A++VV+ G V V+
Sbjct: 699 IKDLSEGMVLEGTVSNVAQFGAFIDLGVHQDGLVHVSQLSNKFVNDAREVVKTGDIVKVR 758
Query: 345 VLSVDAEKKRVSLELK 392
VL VD +KR+SL +K
Sbjct: 759 VLEVDLARKRISLTMK 774
[176][TOP]
>UniRef100_B1WZ45 Probable RNA binding S1 protein n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WZ45_CYAA5
Length = 718
Score = 77.8 bits (190), Expect = 4e-13
Identities = 36/77 (46%), Positives = 55/77 (71%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ D++EG EG +T V FGAFV+ G + +GL+HIS+LA+ F + K+VV+ G+ V V
Sbjct: 640 EINDLREGMILEGVITNVVNFGAFVDIGVHQDGLIHISQLANYFVSDPKEVVKVGEVVKV 699
Query: 342 KVLSVDAEKKRVSLELK 392
KVL +D + KR+SL +K
Sbjct: 700 KVLEIDEKLKRISLSMK 716
[177][TOP]
>UniRef100_A8MJM7 RNA binding S1 domain protein n=1 Tax=Alkaliphilus oremlandii
OhILAs RepID=A8MJM7_ALKOO
Length = 718
Score = 77.8 bits (190), Expect = 4e-13
Identities = 38/89 (42%), Positives = 57/89 (64%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E P + +K+ED+K GTV V +FGAFV+ G +GLVH+S+L++ F KNA
Sbjct: 627 EMPKPLFKSDVLKMEDLKLDMIMPGTVRNVVDFGAFVDIGVKQDGLVHVSELSNRFVKNA 686
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
DVV G +V VK++ +D E+ ++SL +K
Sbjct: 687 MDVVSVGDEVKVKIIGLDIERGKISLSIK 715
[178][TOP]
>UniRef100_A6TLF6 RNA binding S1 domain protein n=1 Tax=Alkaliphilus metalliredigens
QYMF RepID=A6TLF6_ALKMQ
Length = 728
Score = 77.8 bits (190), Expect = 4e-13
Identities = 38/89 (42%), Positives = 56/89 (62%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E P + +K+ED+K GTV V +FGAFV+ G +GLVH+S+L++ F KN
Sbjct: 637 EMPMPIFRSDVLKMEDLKLDMVMTGTVRNVVDFGAFVDIGVKQDGLVHVSQLSNKFVKNP 696
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
DVV G +V VK++ +D E+ +VSL +K
Sbjct: 697 MDVVSVGDEVEVKIIGIDVERGKVSLSMK 725
[179][TOP]
>UniRef100_D0C0W2 Transcriptional accessory protein n=1 Tax=Acinetobacter sp. RUH2624
RepID=D0C0W2_9GAMM
Length = 795
Score = 77.8 bits (190), Expect = 4e-13
Identities = 37/78 (47%), Positives = 55/78 (70%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ + EG + EG VT V FGAFV+ G + +GLVHIS+LA+ F + VV+PGQ V V
Sbjct: 647 EVAQLTEGMQLEGVVTNVTNFGAFVDIGVHQDGLVHISELANEFVSDPHKVVKPGQIVQV 706
Query: 342 KVLSVDAEKKRVSLELKS 395
+V+ VDAE+ RV+L +++
Sbjct: 707 RVMQVDAERNRVNLSMRA 724
[180][TOP]
>UniRef100_B5HSU4 Transcriptional accessory protein n=1 Tax=Streptomyces sviceus ATCC
29083 RepID=B5HSU4_9ACTO
Length = 788
Score = 77.8 bits (190), Expect = 4e-13
Identities = 37/77 (48%), Positives = 51/77 (66%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ D+ G EG VT V FGAF++ G + +GL H+S L+ F K+ +DVV+PG V V
Sbjct: 652 KISDLSAGMVLEGVVTNVAAFGAFIDVGVHQDGLAHVSALSKTFVKDPRDVVKPGDIVKV 711
Query: 342 KVLSVDAEKKRVSLELK 392
KVL VD +KR+SL L+
Sbjct: 712 KVLDVDIPRKRISLTLR 728
[181][TOP]
>UniRef100_B4B1E7 RNA binding S1 domain protein n=1 Tax=Cyanothece sp. PCC 7822
RepID=B4B1E7_9CHRO
Length = 718
Score = 77.8 bits (190), Expect = 4e-13
Identities = 38/80 (47%), Positives = 55/80 (68%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+++ D+KEG E EG VT V FGAFV+ G + +GLVHIS+LA F + VV+ GQ V
Sbjct: 638 MEISDLKEGMELEGIVTNVVNFGAFVDVGVHQDGLVHISQLADHFVSDPNQVVKVGQVVK 697
Query: 339 VKVLSVDAEKKRVSLELKSA 398
V+V+ V+ + KR+ L +K+A
Sbjct: 698 VRVMEVNEKLKRIGLSMKAA 717
[182][TOP]
>UniRef100_A4TUT2 Transcriptional accessory protein n=1 Tax=Magnetospirillum
gryphiswaldense RepID=A4TUT2_9PROT
Length = 779
Score = 77.8 bits (190), Expect = 4e-13
Identities = 36/76 (47%), Positives = 54/76 (71%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
++D++ G EG VT V FGAFV+ G + +GLVH+S LA F K+ +VV+PG V+VK
Sbjct: 651 MQDLQPGMILEGVVTNVTNFGAFVDIGVHQDGLVHVSALADRFVKDPHEVVKPGDVVSVK 710
Query: 345 VLSVDAEKKRVSLELK 392
VL VD ++KR++L ++
Sbjct: 711 VLEVDLKRKRIALTMR 726
[183][TOP]
>UniRef100_B8BU42 Predicted protein n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BU42_THAPS
Length = 398
Score = 77.8 bits (190), Expect = 4e-13
Identities = 33/80 (41%), Positives = 58/80 (72%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
L D++ G+ E TV T+ +GAF++ GA ++ LVH+S+L+ F N +DVV+ G+K+TV+
Sbjct: 138 LADLEIGASVEATVKTITAYGAFLDIGAKSDALVHVSRLSDDFVANVEDVVKAGEKITVR 197
Query: 345 VLSVDAEKKRVSLELKSAVA 404
++SVD EK ++++ ++S A
Sbjct: 198 IVSVDTEKNQIAVTMRSEEA 217
Score = 58.5 bits (140), Expect = 2e-07
Identities = 50/146 (34%), Positives = 67/146 (45%), Gaps = 24/146 (16%)
Frame = +3
Query: 24 VKAHGRSVLRPVRGPAGRRQVAFT---------GVRPSVR----VFAEAPAAEQAA--KA 158
VKA + +R V + Q+A T RP+ R + A QAA KA
Sbjct: 188 VKAGEKITVRIVSVDTEKNQIAVTMRSEEAEASAARPTKRRERPQRSGADQTSQAASIKA 247
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGA---------NTNGLVHISKLASGFTKNAKD 311
I + + +G V + FGAFV F + +GLVHIS LA G T N D
Sbjct: 248 ISDKGFDDSKFIDGEVVSTLAFGAFVRFDSAQLGEGLEGEVDGLVHISALAEGRTANVSD 307
Query: 312 VVQPGQKVTVKVLSVDAEKKRVSLEL 389
V G KV+V+V SV+ E R+SL +
Sbjct: 308 VAAVGDKVSVRVRSVEPEAGRISLSM 333
[184][TOP]
>UniRef100_A6UPD5 RNA binding S1 domain protein n=1 Tax=Methanococcus vannielii SB
RepID=A6UPD5_METVS
Length = 722
Score = 77.8 bits (190), Expect = 4e-13
Identities = 36/81 (44%), Positives = 55/81 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+K ED+KEG +GT+ + +FGAFV+ G + +GL+HIS+++ F K+ +V+ G V
Sbjct: 640 LKFEDLKEGMILKGTIRNIVDFGAFVDIGVHHDGLIHISEVSDRFIKHPLEVISVGDVVN 699
Query: 339 VKVLSVDAEKKRVSLELKSAV 401
V VL +D EK RVSL +K A+
Sbjct: 700 VFVLGIDFEKNRVSLSIKKAI 720
[185][TOP]
>UniRef100_A0LE14 Polyribonucleotide nucleotidyltransferase n=1 Tax=Magnetococcus sp.
MC-1 RepID=PNP_MAGSM
Length = 701
Score = 77.8 bits (190), Expect = 4e-13
Identities = 45/92 (48%), Positives = 61/92 (66%), Gaps = 2/92 (2%)
Frame = +3
Query: 123 AEAPAAEQAAKAIK--LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFT 296
++ +AEQA K IK + +V++G YEG V + +FGAFVN N +GLVHIS+LA+
Sbjct: 603 SDQASAEQAVKIIKSIVAEVEKGQVYEGKVVRITDFGAFVNILPNKDGLVHISQLANRRV 662
Query: 297 KNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
+N DVV+ G VTVKVL VD + RV L +K
Sbjct: 663 QNVTDVVKEGDVVTVKVLDVD-RQGRVKLTMK 693
[186][TOP]
>UniRef100_C6RQH0 Transcriptional accessory protein n=2 Tax=Acinetobacter
radioresistens RepID=C6RQH0_ACIRA
Length = 785
Score = 77.4 bits (189), Expect = 5e-13
Identities = 36/76 (47%), Positives = 54/76 (71%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
++ + EG + EG VT V FGAFV+ G + +GLVHIS+LA+ F + +V+PGQ V V+
Sbjct: 636 VKQLTEGMQLEGVVTNVTNFGAFVDIGVHQDGLVHISELANEFVSDPHKIVKPGQIVQVR 695
Query: 345 VLSVDAEKKRVSLELK 392
V+ VDAE+ RV+L ++
Sbjct: 696 VIQVDAERNRVNLSMR 711
[187][TOP]
>UniRef100_UPI0001B4186F S1 RNA binding domain protein n=1 Tax=Bacillus anthracis str.
Australia 94 RepID=UPI0001B4186F
Length = 722
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[188][TOP]
>UniRef100_UPI0001905DA4 probable transcriptional accessory protein (RNA binding S1 domain)
n=1 Tax=Rhizobium etli GR56 RepID=UPI0001905DA4
Length = 256
Score = 77.4 bits (189), Expect = 5e-13
Identities = 36/77 (46%), Positives = 54/77 (70%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+ +VV+ G V V
Sbjct: 130 EISDLKPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKV 189
Query: 342 KVLSVDAEKKRVSLELK 392
+V+ VDA++KR+ L ++
Sbjct: 190 RVVEVDAKRKRIGLSMR 206
[189][TOP]
>UniRef100_UPI00003847A9 COG2183: Transcriptional accessory protein n=1 Tax=Magnetospirillum
magnetotacticum MS-1 RepID=UPI00003847A9
Length = 784
Score = 77.4 bits (189), Expect = 5e-13
Identities = 38/76 (50%), Positives = 52/76 (68%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
L D+K G EG VT V FGAFV+ G + +GLVHIS LA F K+ +VV+PG V VK
Sbjct: 659 LNDLKPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISVLADRFVKDPHEVVKPGDLVKVK 718
Query: 345 VLSVDAEKKRVSLELK 392
VL VD +++R++L ++
Sbjct: 719 VLEVDLKRQRIALSMR 734
[190][TOP]
>UniRef100_Q73ET3 S1 RNA binding domain protein n=1 Tax=Bacillus cereus ATCC 10987
RepID=Q73ET3_BACC1
Length = 722
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[191][TOP]
>UniRef100_Q67K87 Ribosomal protein S1-like RNA-binding domain n=1
Tax=Symbiobacterium thermophilum RepID=Q67K87_SYMTH
Length = 764
Score = 77.4 bits (189), Expect = 5e-13
Identities = 38/89 (42%), Positives = 57/89 (64%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E P +KLED++ G E GTV V +FGAFV+ G + +GLVH+S+L+ + K+
Sbjct: 632 ELPQPIFRTDVLKLEDLQVGMELMGTVRNVVDFGAFVDIGVHEDGLVHVSQLSHKYVKHP 691
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
+VVQ G V VKV+ VD +++R+ L +K
Sbjct: 692 SEVVQVGDVVRVKVIEVDLKRQRIGLSMK 720
[192][TOP]
>UniRef100_Q63GW7 Probable transcription accessory protein, S1 RNA-binding domain n=1
Tax=Bacillus cereus E33L RepID=Q63GW7_BACCZ
Length = 724
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 644 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 703
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 704 VWVDDIDTKKGRVALSM 720
[193][TOP]
>UniRef100_Q1MKQ5 Putative RNA-binding domain transcriptional regulator n=1
Tax=Rhizobium leguminosarum bv. viciae 3841
RepID=Q1MKQ5_RHIL3
Length = 769
Score = 77.4 bits (189), Expect = 5e-13
Identities = 36/77 (46%), Positives = 54/77 (70%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+ +VV+ G V V
Sbjct: 643 EISDLKPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFVKDPHEVVKAGDVVKV 702
Query: 342 KVLSVDAEKKRVSLELK 392
+V+ VDA++KR+ L ++
Sbjct: 703 RVVEVDAKRKRIGLSMR 719
[194][TOP]
>UniRef100_Q0VSY6 S1 RNA binding domain protein n=1 Tax=Alcanivorax borkumensis SK2
RepID=Q0VSY6_ALCBS
Length = 790
Score = 77.4 bits (189), Expect = 5e-13
Identities = 38/76 (50%), Positives = 52/76 (68%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
L+D+K+ EGTVT V FGAFV+ G + +GLVH+S LA F ++ VV PG V VK
Sbjct: 644 LKDLKQNMILEGTVTNVTNFGAFVDVGVHQDGLVHVSALADKFVEDPHQVVAPGDIVKVK 703
Query: 345 VLSVDAEKKRVSLELK 392
VL VD ++KR+SL ++
Sbjct: 704 VLDVDLDRKRISLTMR 719
[195][TOP]
>UniRef100_Q0RTD4 Putative transcriptional accessory protein n=1 Tax=Frankia alni
ACN14a RepID=Q0RTD4_FRAAA
Length = 895
Score = 77.4 bits (189), Expect = 5e-13
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +3
Query: 102 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 281
RP+ R A E A D+ G EGTVT V FGAFV+ G + +GLVH+S +
Sbjct: 641 RPAFRTAAFTEGIETLA------DLVPGMTLEGTVTNVAAFGAFVDVGVHQDGLVHVSAM 694
Query: 282 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
+ F + ++V +PG VTVKVL VD +KR+SL L+
Sbjct: 695 SKNFVSDPREVAKPGDIVTVKVLDVDIPRKRISLTLR 731
[196][TOP]
>UniRef100_C6XJK5 RNA binding S1 domain protein n=1 Tax=Hirschia baltica ATCC 49814
RepID=C6XJK5_HIRBI
Length = 736
Score = 77.4 bits (189), Expect = 5e-13
Identities = 36/78 (46%), Positives = 52/78 (66%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ D+ G + EGTVT V FGAFV+ G + +GLVHIS+LA F + D+V+ G V V
Sbjct: 648 EISDLNSGMKLEGTVTNVTAFGAFVDIGVHQDGLVHISQLADKFVSDPHDIVKAGDIVNV 707
Query: 342 KVLSVDAEKKRVSLELKS 395
V+ VD ++KR+ L +KS
Sbjct: 708 TVMEVDVQRKRIGLSMKS 725
[197][TOP]
>UniRef100_C1EUA0 S1 RNA binding domain protein n=1 Tax=Bacillus cereus 03BB102
RepID=C1EUA0_BACC3
Length = 722
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[198][TOP]
>UniRef100_B8HZ35 RNA binding S1 domain protein n=1 Tax=Cyanothece sp. PCC 7425
RepID=B8HZ35_CYAP4
Length = 763
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/91 (43%), Positives = 56/91 (61%)
Frame = +3
Query: 123 AEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKN 302
AE A A + D+ G + EG VT V FGAFV+ G + +GLVH+S+LA F +
Sbjct: 626 AEFTFARFRADVKAISDLSVGMQLEGMVTNVANFGAFVDIGVHQDGLVHVSQLADRFVSD 685
Query: 303 AKDVVQPGQKVTVKVLSVDAEKKRVSLELKS 395
K +V+ GQ V V+VL VD + KR+SL ++S
Sbjct: 686 PKQIVKVGQVVNVRVLEVDEKLKRISLSMRS 716
[199][TOP]
>UniRef100_B2UZM1 Protein tex n=1 Tax=Clostridium botulinum E3 str. Alaska E43
RepID=B2UZM1_CLOBA
Length = 725
Score = 77.4 bits (189), Expect = 5e-13
Identities = 39/89 (43%), Positives = 57/89 (64%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E PA I+L+D+K G GTV V +FGAFV+ G + +GLVH S++A+ F K+
Sbjct: 629 EMPAPILKTGIIELKDLKPGMVLNGTVRNVSDFGAFVDIGVHQDGLVHKSQMANRFVKHP 688
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
D+V+ G V V +L VD ++KR+SL +K
Sbjct: 689 LDIVKVGDIVKVSILEVDQKRKRISLSMK 717
[200][TOP]
>UniRef100_B1ZSU7 RNA binding S1 domain protein n=1 Tax=Opitutus terrae PB90-1
RepID=B1ZSU7_OPITP
Length = 794
Score = 77.4 bits (189), Expect = 5e-13
Identities = 38/76 (50%), Positives = 53/76 (69%)
Frame = +3
Query: 168 EDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKV 347
+D+K G + G VT V FGAFV+ G + +GLVHIS+LA F K+A VV+P QKVTV V
Sbjct: 660 KDLKPGMKLPGIVTNVTAFGAFVDIGVHQDGLVHISQLADTFVKDAATVVKPQQKVTVTV 719
Query: 348 LSVDAEKKRVSLELKS 395
+ VD + R++L ++S
Sbjct: 720 VEVDLARNRIALSMRS 735
[201][TOP]
>UniRef100_Q4MPT2 S1 RNA binding domain protein n=1 Tax=Bacillus cereus G9241
RepID=Q4MPT2_BACCE
Length = 722
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[202][TOP]
>UniRef100_C9Z848 Putative transcriptional accessory protein n=1 Tax=Streptomyces
scabiei 87.22 RepID=C9Z848_STRSC
Length = 794
Score = 77.4 bits (189), Expect = 5e-13
Identities = 37/77 (48%), Positives = 51/77 (66%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ D+ G EG VT V FGAF++ G + +GL H+S L+ F K+ +DVV+PG V V
Sbjct: 651 KISDLVSGMVLEGVVTNVAAFGAFIDVGVHQDGLAHVSALSKTFVKDPRDVVKPGDIVKV 710
Query: 342 KVLSVDAEKKRVSLELK 392
KVL VD +KR+SL L+
Sbjct: 711 KVLDVDIPRKRISLTLR 727
[203][TOP]
>UniRef100_C9NGA0 RNA binding S1 domain protein n=1 Tax=Streptomyces flavogriseus
ATCC 33331 RepID=C9NGA0_9ACTO
Length = 808
Score = 77.4 bits (189), Expect = 5e-13
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
KL D+ G EG VT V FGAFV+ G + +GLVH+S ++ F K+ +DVV+PG V V
Sbjct: 644 KLGDLVPGMVLEGVVTNVAAFGAFVDVGVHQDGLVHVSAMSRTFVKDPRDVVKPGDIVKV 703
Query: 342 KVLSVDAEKKRVSLELK 392
KV+ VD +KRVSL L+
Sbjct: 704 KVMDVDIPRKRVSLTLR 720
[204][TOP]
>UniRef100_C6NZN2 RNA binding S1 domain protein n=1 Tax=Sideroxydans lithotrophicus
ES-1 RepID=C6NZN2_9GAMM
Length = 801
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/77 (51%), Positives = 53/77 (68%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
+L+D++ G EG VT V FGAFV+ G + +GLVHIS LA F K+ VV+ GQ V V
Sbjct: 672 ELKDLEPGMILEGVVTNVAAFGAFVDIGVHQDGLVHISALADKFVKDPHSVVKAGQIVKV 731
Query: 342 KVLSVDAEKKRVSLELK 392
KVL VD ++KRVSL ++
Sbjct: 732 KVLEVDVKRKRVSLTMR 748
[205][TOP]
>UniRef100_C3FXH2 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1 RepID=C3FXH2_BACTU
Length = 722
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[206][TOP]
>UniRef100_C3BWR5 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1 RepID=C3BWR5_BACTU
Length = 722
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[207][TOP]
>UniRef100_C2VN38 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus Rock3-42
RepID=C2VN38_BACCE
Length = 722
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[208][TOP]
>UniRef100_C2UPY9 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus Rock3-28
RepID=C2UPY9_BACCE
Length = 722
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED++ G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLQRGMELEGTVRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[209][TOP]
>UniRef100_C2TRT2 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=3 Tax=Bacillus cereus RepID=C2TRT2_BACCE
Length = 722
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED++ G E EGTV V +FGAFV+ G +GLVHISKL+ F K+ DVV GQ V
Sbjct: 642 LKLEDLQRGMELEGTVRNVVDFGAFVDIGVKQDGLVHISKLSKQFVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[210][TOP]
>UniRef100_C2QME8 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus ATCC 4342
RepID=C2QME8_BACCE
Length = 722
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[211][TOP]
>UniRef100_C2Q6H0 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus R309803
RepID=C2Q6H0_BACCE
Length = 722
Score = 77.4 bits (189), Expect = 5e-13
Identities = 39/77 (50%), Positives = 53/77 (68%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL++ + K+ D+V GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSTQYVKHPLDIVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[212][TOP]
>UniRef100_C2MF83 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus m1293 RepID=C2MF83_BACCE
Length = 722
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[213][TOP]
>UniRef100_C2EGG6 S1 domain RNA-binding protein n=1 Tax=Lactobacillus salivarius ATCC
11741 RepID=C2EGG6_9LACO
Length = 723
Score = 77.4 bits (189), Expect = 5e-13
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+K+ED+K G + EGTV V +FGAFV+ G +GLVH+SKL+ + N +DVV GQ VT
Sbjct: 642 LKIEDLKAGMQLEGTVRNVVDFGAFVDIGVKQDGLVHLSKLSKKYVSNPRDVVAVGQIVT 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V VD ++R+ L +
Sbjct: 702 VWVEDVDLNRRRIQLTM 718
[214][TOP]
>UniRef100_C2EE72 S1 domain RNA-binding protein n=1 Tax=Lactobacillus ruminis ATCC
25644 RepID=C2EE72_9LACO
Length = 727
Score = 77.4 bits (189), Expect = 5e-13
Identities = 38/77 (49%), Positives = 51/77 (66%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+ LED+KEG + +GTV V +FGAFV+ G +GLVH+SKL GF KN DVV G V
Sbjct: 645 LHLEDLKEGMKLQGTVRNVVDFGAFVDIGVKQDGLVHVSKLKKGFVKNPSDVVSVGDIVD 704
Query: 339 VKVLSVDAEKKRVSLEL 389
V + SVD ++ R+ L +
Sbjct: 705 VWIDSVDEKRGRIQLTM 721
[215][TOP]
>UniRef100_C0GIG1 RNA binding S1 domain protein n=1 Tax=Dethiobacter alkaliphilus AHT
1 RepID=C0GIG1_9FIRM
Length = 713
Score = 77.4 bits (189), Expect = 5e-13
Identities = 37/75 (49%), Positives = 53/75 (70%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+ LED++EG E G V V +FGAFV+ G + +GL+HIS+L+ F K+ +VVQ G V
Sbjct: 633 LHLEDLQEGMELTGVVRNVVDFGAFVDIGVHQDGLIHISQLSDKFVKHPLEVVQVGDVVE 692
Query: 339 VKVLSVDAEKKRVSL 383
VKV+S+D +KKR+ L
Sbjct: 693 VKVISLDVKKKRIGL 707
[216][TOP]
>UniRef100_B7HRZ4 S1 RNA binding domain protein n=4 Tax=Bacillus cereus
RepID=B7HRZ4_BACC7
Length = 724
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 644 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 703
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 704 VWVDDIDTKKGRVALSM 720
[217][TOP]
>UniRef100_A0R8V4 Transcription accessory protein, S1 RNA-binding domain n=19
Tax=Bacillus cereus group RepID=A0R8V4_BACAH
Length = 724
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/77 (51%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 644 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 703
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 704 VWVDDIDTKKGRVALSM 720
[218][TOP]
>UniRef100_A1ZG34 S1 RNA binding domain protein n=1 Tax=Microscilla marina ATCC 23134
RepID=A1ZG34_9SPHI
Length = 764
Score = 77.4 bits (189), Expect = 5e-13
Identities = 40/90 (44%), Positives = 57/90 (63%)
Frame = +3
Query: 123 AEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKN 302
A+ E A +ED+K G + G VT V +FGAFV+ G + +GLVHIS+L++ F +
Sbjct: 618 AKFEVVEFAEGVNTIEDLKTGMKLNGVVTNVTKFGAFVDIGVHQDGLVHISELSNTFVSD 677
Query: 303 AKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
+VV+ QKV V VL VD E+KR+ L +K
Sbjct: 678 PNEVVKVQQKVEVMVLDVDVERKRIQLTMK 707
[219][TOP]
>UniRef100_A6VG72 RNA binding S1 domain protein n=1 Tax=Methanococcus maripaludis C7
RepID=A6VG72_METM7
Length = 713
Score = 77.4 bits (189), Expect = 5e-13
Identities = 37/91 (40%), Positives = 58/91 (63%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
+ P + ++LED+KEG +GTV + +FGAF++ G + +GL HIS+++ F K+
Sbjct: 622 DLPKPVLRSDVLELEDLKEGMILKGTVRNIVDFGAFIDIGVHHDGLAHISEISDRFIKHP 681
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELKSA 398
DV+ G V V V+ +D +KKRVSL +K A
Sbjct: 682 LDVISVGDIVDVMVMDIDFDKKRVSLSIKRA 712
[220][TOP]
>UniRef100_UPI0001744388 S1 RNA-binding domain protein n=1 Tax=Verrucomicrobium spinosum DSM
4136 RepID=UPI0001744388
Length = 785
Score = 77.0 bits (188), Expect = 6e-13
Identities = 38/78 (48%), Positives = 54/78 (69%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K ED+K G + G VT V FGAFV+ G + +GLVH+S+L+ F K+A +VV+ QKV V
Sbjct: 642 KPEDLKVGMKLPGIVTNVTAFGAFVDIGVHQDGLVHVSQLSDHFVKDASEVVKVQQKVQV 701
Query: 342 KVLSVDAEKKRVSLELKS 395
V VD ++KR++L +KS
Sbjct: 702 TVTEVDLQRKRIALSMKS 719
[221][TOP]
>UniRef100_Q98HG3 Mll2881 protein n=1 Tax=Mesorhizobium loti RepID=Q98HG3_RHILO
Length = 774
Score = 77.0 bits (188), Expect = 6e-13
Identities = 36/76 (47%), Positives = 55/76 (72%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
++D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+A +VV+ G V V+
Sbjct: 647 IKDLKPGMLLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADRFIKDAHEVVKAGDVVKVR 706
Query: 345 VLSVDAEKKRVSLELK 392
V+ VD ++KR++L ++
Sbjct: 707 VVDVDIKRKRIALSMR 722
[222][TOP]
>UniRef100_Q2W1Q4 TEX protein n=1 Tax=Magnetospirillum magneticum AMB-1
RepID=Q2W1Q4_MAGSA
Length = 787
Score = 77.0 bits (188), Expect = 6e-13
Identities = 38/76 (50%), Positives = 51/76 (67%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
L D+K G EG VT V FGAFV+ G + +GLVHIS LA F K+ +VV+PG V VK
Sbjct: 659 LNDLKPGMILEGVVTNVTNFGAFVDIGVHQDGLVHISVLADRFVKDPHEVVKPGDLVKVK 718
Query: 345 VLSVDAEKKRVSLELK 392
VL VD ++ R++L ++
Sbjct: 719 VLEVDIKRSRIALSMR 734
[223][TOP]
>UniRef100_Q12AI9 RNA binding S1 n=1 Tax=Polaromonas sp. JS666 RepID=Q12AI9_POLSJ
Length = 803
Score = 77.0 bits (188), Expect = 6e-13
Identities = 36/76 (47%), Positives = 53/76 (69%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
+ D+KEG EGTV+ V FGAFV+ G + +GLVH+S+LA+ F +A++VV+ G V V+
Sbjct: 670 IRDLKEGMTLEGTVSNVAAFGAFVDIGVHQDGLVHVSQLANKFVNDAREVVKTGDIVKVR 729
Query: 345 VLSVDAEKKRVSLELK 392
V VD +KR+ L +K
Sbjct: 730 VTEVDVARKRIGLTMK 745
[224][TOP]
>UniRef100_Q01R15 RNA binding S1 domain protein n=1 Tax=Candidatus Solibacter
usitatus Ellin6076 RepID=Q01R15_SOLUE
Length = 749
Score = 77.0 bits (188), Expect = 6e-13
Identities = 35/78 (44%), Positives = 56/78 (71%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ D++ G EG VT V FGAF++ G + +GLVH+S+LA+ F K+A +VV+ GQ V V
Sbjct: 636 EIADLQPGMTLEGVVTNVTRFGAFIDVGVHNDGLVHVSQLANRFVKDASEVVKAGQIVKV 695
Query: 342 KVLSVDAEKKRVSLELKS 395
+V+S D + KR++L +K+
Sbjct: 696 QVISADPKTKRIALSMKA 713
[225][TOP]
>UniRef100_C5D4D6 RNA binding S1 domain protein n=1 Tax=Geobacillus sp. WCH70
RepID=C5D4D6_GEOSW
Length = 728
Score = 77.0 bits (188), Expect = 6e-13
Identities = 42/97 (43%), Positives = 57/97 (58%)
Frame = +3
Query: 99 VRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISK 278
+RP E P +K+ED+K G E EGTV V +FGAFV+ G +GLVHISK
Sbjct: 620 IRPERDPRDELPKPLLRKDILKMEDLKRGMELEGTVRNVVDFGAFVDIGVKQDGLVHISK 679
Query: 279 LASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
L+ + ++ DVV G V V V +VD +K R+SL +
Sbjct: 680 LSKQYVRHPLDVVSVGDVVKVWVDNVDLDKGRISLSM 716
[226][TOP]
>UniRef100_C3PH70 Putative transcriptional accessory protein n=1 Tax=Corynebacterium
aurimucosum ATCC 700975 RepID=C3PH70_CORA7
Length = 759
Score = 77.0 bits (188), Expect = 6e-13
Identities = 36/77 (46%), Positives = 52/77 (67%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
K+ D+K G EGTVT V FGAF++ G + +GLVH+S ++ F + DVV+ GQ V V
Sbjct: 634 KVSDLKPGMILEGTVTNVAAFGAFIDIGVHQDGLVHVSAMSHKFVSDPHDVVRSGQVVKV 693
Query: 342 KVLSVDAEKKRVSLELK 392
KV+ VD E++R+ L L+
Sbjct: 694 KVMEVDVERQRIGLSLR 710
[227][TOP]
>UniRef100_C1B2S2 Transcriptional accessory protein n=1 Tax=Rhodococcus opacus B4
RepID=C1B2S2_RHOOB
Length = 807
Score = 77.0 bits (188), Expect = 6e-13
Identities = 40/89 (44%), Positives = 55/89 (61%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E A AA K+ +K G EG VT V FGAFV+ G + +GLVH+S ++ F K+
Sbjct: 621 EFKTATFAAGIEKVSHLKPGMTLEGVVTNVAAFGAFVDIGVHQDGLVHVSAMSHNFVKDP 680
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
+DVV+ G VTVKVL VD ++R+ L L+
Sbjct: 681 RDVVKSGDVVTVKVLEVDEARQRIGLTLR 709
[228][TOP]
>UniRef100_A8ZSR0 RNA binding S1 domain protein n=1 Tax=Desulfococcus oleovorans Hxd3
RepID=A8ZSR0_DESOH
Length = 759
Score = 77.0 bits (188), Expect = 6e-13
Identities = 36/77 (46%), Positives = 54/77 (70%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
++DV+ G + G VT + FGAFV+ G + +GLVHIS++A F K+ D+V+ Q+V V
Sbjct: 629 IDDVQPGMKLPGIVTNITAFGAFVDIGVHQDGLVHISQMADRFVKSPADIVKVQQRVMVT 688
Query: 345 VLSVDAEKKRVSLELKS 395
VL VD E+KR+SL +K+
Sbjct: 689 VLEVDKERKRISLSMKA 705
[229][TOP]
>UniRef100_A5V0B5 RNA binding S1 domain protein n=1 Tax=Roseiflexus sp. RS-1
RepID=A5V0B5_ROSS1
Length = 514
Score = 77.0 bits (188), Expect = 6e-13
Identities = 40/79 (50%), Positives = 51/79 (64%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
KL ++ G EGTVT + FG FV+ G +GLVH+S+LA G + A+DVVQ GQ T
Sbjct: 234 KLAALRVGDNVEGTVTGMAPFGVFVDIGVGKDGLVHVSELAEGRVEKAEDVVQVGQTYTF 293
Query: 342 KVLSVDAEKKRVSLELKSA 398
KVL VDA R+SL L+ A
Sbjct: 294 KVLEVDAAGARISLSLRRA 312
Score = 73.6 bits (179), Expect = 7e-12
Identities = 35/83 (42%), Positives = 56/83 (67%)
Frame = +3
Query: 144 QAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQP 323
+A + KL+ +++G EGT++ + FGAFV+ G +GLVHIS+L++ +DVV+
Sbjct: 311 RAQRGQKLQQLEKGQILEGTISGLAPFGAFVDIGVGRDGLVHISELSNTHVARVEDVVKV 370
Query: 324 GQKVTVKVLSVDAEKKRVSLELK 392
G +V V+VL VD + KR+SL L+
Sbjct: 371 GDRVQVRVLDVDPQSKRISLSLR 393
Score = 70.1 bits (170), Expect = 7e-11
Identities = 38/114 (33%), Positives = 65/114 (57%)
Frame = +3
Query: 54 PVRGPAGRRQVAFTGVRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAF 233
PV AG A P+ +APA E + +++D+ G E EG VT++ +G F
Sbjct: 102 PVTDDAGSASAA---APPAEEASYQAPAEETPGRPRRVKDLAPGMELEGRVTSIALYGIF 158
Query: 234 VNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELKS 395
V+ G +GLVHIS+++ ++ D+V+ G V V+V SV+ + +R+SL +++
Sbjct: 159 VDIGVGRDGLVHISEMSDTRIESPSDLVKIGDTVKVRVKSVEPDGRRISLTMRT 212
[230][TOP]
>UniRef100_A1WZ97 RNA binding S1 domain protein n=1 Tax=Halorhodospira halophila SL1
RepID=A1WZ97_HALHL
Length = 798
Score = 77.0 bits (188), Expect = 6e-13
Identities = 41/97 (42%), Positives = 58/97 (59%)
Frame = +3
Query: 102 RPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKL 281
RP R A E K++D++ G EGTVT V FGAFV+ G + +GLVHIS L
Sbjct: 642 RPEFRTAAFREGVE------KIQDLEPGMVLEGTVTNVANFGAFVDIGVHQDGLVHISAL 695
Query: 282 ASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
A F ++ +D V+ G V VKV+ VD E++R+ L ++
Sbjct: 696 AHEFVRDPRDKVRTGDVVQVKVMEVDLERQRIGLSMR 732
[231][TOP]
>UniRef100_C8Q161 Protein tex n=1 Tax=Enhydrobacter aerosaccus SK60
RepID=C8Q161_9GAMM
Length = 849
Score = 77.0 bits (188), Expect = 6e-13
Identities = 38/77 (49%), Positives = 52/77 (67%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
L D+ EG EG VT V FG FV+ G + +GLVHIS++ + F + + V+PG VTV+
Sbjct: 689 LNDLTEGMTLEGVVTNVTSFGCFVDVGVHQDGLVHISEMGNEFIADPLNHVKPGDIVTVR 748
Query: 345 VLSVDAEKKRVSLELKS 395
V+SVDAE+KRV +KS
Sbjct: 749 VISVDAERKRVGFSMKS 765
[232][TOP]
>UniRef100_C7HH59 RNA binding S1 domain protein n=1 Tax=Clostridium thermocellum DSM
2360 RepID=C7HH59_CLOTM
Length = 718
Score = 77.0 bits (188), Expect = 6e-13
Identities = 38/89 (42%), Positives = 55/89 (61%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E P + LED++ G GTV V +FGAFV+ G + +GLVHIS+L+ + K+
Sbjct: 627 ELPKPMLLTDVLHLEDLRPGMILTGTVRNVADFGAFVDVGVHQDGLVHISELSDKYVKSP 686
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
DVV G V V++L VD E+KR+S+ +K
Sbjct: 687 MDVVSVGDIVKVRILDVDVERKRISMSMK 715
[233][TOP]
>UniRef100_C6PFK5 RNA binding S1 domain protein n=1 Tax=Thermoanaerobacter italicus
Ab9 RepID=C6PFK5_9THEO
Length = 712
Score = 77.0 bits (188), Expect = 6e-13
Identities = 38/89 (42%), Positives = 56/89 (62%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
+ P + + + ++K G E GTV V +FG FV+ G +T+GLVHIS+++ + K+
Sbjct: 624 DLPKPVLRSDVMTINELKPGMELMGTVRNVTDFGCFVDIGVHTDGLVHISEMSQSYIKHP 683
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
DVV G V VKVLSVD E+ R+SL +K
Sbjct: 684 LDVVAVGDIVKVKVLSVDLERNRISLSMK 712
[234][TOP]
>UniRef100_C4WBM3 Protein YhgF n=1 Tax=Staphylococcus warneri L37603
RepID=C4WBM3_STAWA
Length = 716
Score = 77.0 bits (188), Expect = 6e-13
Identities = 36/77 (46%), Positives = 51/77 (66%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+ +ED+ EG + GTV V +FGAFV+ G +GLVH+SKL+ F KN D+V G V
Sbjct: 635 LSIEDLSEGMKLSGTVRNVVDFGAFVDIGVKQDGLVHVSKLSKKFVKNPMDIVSVGDIVD 694
Query: 339 VKVLSVDAEKKRVSLEL 389
V +LS+D +K +VSL +
Sbjct: 695 VWILSIDTQKDKVSLTI 711
[235][TOP]
>UniRef100_C3HCT7 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1 RepID=C3HCT7_BACTU
Length = 722
Score = 77.0 bits (188), Expect = 6e-13
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAF++ G +GLVHISKL+ + K+ DVV GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFIDVGVKQDGLVHISKLSKQYVKHPLDVVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[236][TOP]
>UniRef100_C2YL46 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus AH1271
RepID=C2YL46_BACCE
Length = 656
Score = 77.0 bits (188), Expect = 6e-13
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ D+V GQ V
Sbjct: 576 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDIVSVGQIVK 635
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 636 VWVDDIDTKKGRVALSM 652
[237][TOP]
>UniRef100_C2P9F5 Tex protein-related transcription accessory protein (S1 RNA binding
domain) n=1 Tax=Bacillus cereus MM3 RepID=C2P9F5_BACCE
Length = 722
Score = 77.0 bits (188), Expect = 6e-13
Identities = 39/77 (50%), Positives = 52/77 (67%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+KLED+K G E EGTV V +FGAFV+ G +GLVHISKL+ + K+ D+V GQ V
Sbjct: 642 LKLEDLKRGMELEGTVRNVVDFGAFVDVGVKQDGLVHISKLSKQYVKHPLDIVSVGQIVK 701
Query: 339 VKVLSVDAEKKRVSLEL 389
V V +D +K RV+L +
Sbjct: 702 VWVDDIDTKKGRVALSM 718
[238][TOP]
>UniRef100_B6G8Z0 Putative uncharacterized protein n=1 Tax=Collinsella stercoris DSM
13279 RepID=B6G8Z0_9ACTN
Length = 835
Score = 77.0 bits (188), Expect = 6e-13
Identities = 40/88 (45%), Positives = 56/88 (63%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
+AP + A +ED++ G E +GTV V +FGAFV+ G + +GLVHISKLA F K+
Sbjct: 741 DAPEVVFSQAARSIEDLEVGMELKGTVRNVVDFGAFVDIGVHQDGLVHISKLADRFVKHP 800
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLEL 389
+VV G VTV V VD +K++SL +
Sbjct: 801 SEVVAVGDTVTVWVTGVDRTRKKISLTM 828
[239][TOP]
>UniRef100_A3DGU4 RNA binding S1 n=2 Tax=Clostridium thermocellum RepID=A3DGU4_CLOTH
Length = 718
Score = 77.0 bits (188), Expect = 6e-13
Identities = 38/89 (42%), Positives = 55/89 (61%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E P + LED++ G GTV V +FGAFV+ G + +GLVHIS+L+ + K+
Sbjct: 627 ELPKPMLLTDVLHLEDLRPGMILTGTVRNVADFGAFVDVGVHQDGLVHISELSDKYVKSP 686
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
DVV G V V++L VD E+KR+S+ +K
Sbjct: 687 MDVVSVGDIVKVRILDVDVERKRISMSMK 715
[240][TOP]
>UniRef100_B0A7X7 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM
16795 RepID=B0A7X7_9CLOT
Length = 724
Score = 77.0 bits (188), Expect = 6e-13
Identities = 35/78 (44%), Positives = 54/78 (69%)
Frame = +3
Query: 159 IKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVT 338
+K+ED+KEG +GTV V +FGAFV+ G +GLVH S++++ F K+ ++V G +
Sbjct: 646 LKIEDIKEGMVLKGTVRNVVDFGAFVDIGIKNDGLVHKSQMSNKFVKDPMEIVSVGDVID 705
Query: 339 VKVLSVDAEKKRVSLELK 392
VKV+ +D +K RVSL +K
Sbjct: 706 VKVIGIDLDKGRVSLSMK 723
[241][TOP]
>UniRef100_UPI0001BB9DBF transcriptional accessory protein n=1 Tax=Acinetobacter lwoffii
SH145 RepID=UPI0001BB9DBF
Length = 789
Score = 76.6 bits (187), Expect = 8e-13
Identities = 37/77 (48%), Positives = 54/77 (70%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ + EG + EG VT V FGAFV+ G + +GLVHIS+L + F + VV+PGQ V V
Sbjct: 640 EVAQLSEGMQLEGVVTNVTNFGAFVDVGVHQDGLVHISELTNEFVADPHKVVKPGQIVQV 699
Query: 342 KVLSVDAEKKRVSLELK 392
+VL+VDAE+ RV+L ++
Sbjct: 700 RVLNVDAERNRVNLSMR 716
[242][TOP]
>UniRef100_C6D0I6 RNA binding S1 domain protein n=1 Tax=Paenibacillus sp. JDR-2
RepID=C6D0I6_PAESJ
Length = 747
Score = 76.6 bits (187), Expect = 8e-13
Identities = 41/98 (41%), Positives = 57/98 (58%)
Frame = +3
Query: 99 VRPSVRVFAEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISK 278
+RP E P + +ED+ G E +GTV V +FGAF++ G +GLVHIS+
Sbjct: 647 LRPGRDPREELPPPIFHTDVLNIEDLTPGMELQGTVRNVIDFGAFIDIGIKNDGLVHISQ 706
Query: 279 LASGFTKNAKDVVQPGQKVTVKVLSVDAEKKRVSLELK 392
++ F K+ DVV G VTV VL VD +K RVSL ++
Sbjct: 707 MSDKFVKHPMDVVSVGDNVTVWVLGVDLKKGRVSLTMR 744
[243][TOP]
>UniRef100_D0CP90 Protein YhgF n=1 Tax=Silicibacter lacuscaerulensis ITI-1157
RepID=D0CP90_9RHOB
Length = 810
Score = 76.6 bits (187), Expect = 8e-13
Identities = 36/77 (46%), Positives = 53/77 (68%)
Frame = +3
Query: 162 KLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTV 341
++ D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+ +VV+ GQ V V
Sbjct: 681 EITDLKPGMVLEGTVTNVAAFGAFVDIGVHQDGLVHVSELADRFVKDPHEVVKAGQVVRV 740
Query: 342 KVLSVDAEKKRVSLELK 392
+V+ VD +KR+ L ++
Sbjct: 741 RVVEVDVPRKRIGLSMR 757
[244][TOP]
>UniRef100_C9BB85 RNA binding protein S1 n=1 Tax=Enterococcus faecium 1,141,733
RepID=C9BB85_ENTFC
Length = 726
Score = 76.6 bits (187), Expect = 8e-13
Identities = 41/90 (45%), Positives = 53/90 (58%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E PA + +ED+K G E GTV V +FGAFV+ G +GLVHISKL+ F K+
Sbjct: 633 EMPAPLLRTDVLSMEDLKPGMELTGTVRNVIDFGAFVDIGVKQDGLVHISKLSKKFVKHP 692
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELKS 395
DVV G VT + VD +K R+SL + S
Sbjct: 693 TDVVSVGDIVTAWIEQVDTKKGRISLTMLS 722
[245][TOP]
>UniRef100_C9AMT8 RNA binding protein S1 n=1 Tax=Enterococcus faecium Com15
RepID=C9AMT8_ENTFC
Length = 726
Score = 76.6 bits (187), Expect = 8e-13
Identities = 41/90 (45%), Positives = 53/90 (58%)
Frame = +3
Query: 126 EAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNA 305
E PA + +ED+K G E GTV +FGAFV+ G +GLVHISKL+ F K+
Sbjct: 633 EMPAPLLRTDVLSMEDLKPGMELTGTVRNAIDFGAFVDIGVKQDGLVHISKLSKKFVKHP 692
Query: 306 KDVVQPGQKVTVKVLSVDAEKKRVSLELKS 395
DVV G VTV + VD +K R+SL + S
Sbjct: 693 TDVVSVGDIVTVWIEQVDTKKGRISLTMLS 722
[246][TOP]
>UniRef100_C8STW5 RNA binding S1 domain protein n=1 Tax=Mesorhizobium opportunistum
WSM2075 RepID=C8STW5_9RHIZ
Length = 773
Score = 76.6 bits (187), Expect = 8e-13
Identities = 35/76 (46%), Positives = 55/76 (72%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
++D+K G EGTVT V FGAF++ G + +GLVH+S+LA F K+A +VV+ G V V+
Sbjct: 647 IKDLKPGMLLEGTVTNVAAFGAFIDIGVHQDGLVHVSQLADRFIKDAHEVVKAGDVVKVR 706
Query: 345 VLSVDAEKKRVSLELK 392
V+ VD ++KR++L ++
Sbjct: 707 VVDVDIKRKRIALSMR 722
[247][TOP]
>UniRef100_C8S0W3 RNA binding S1 domain protein n=1 Tax=Rhodobacter sp. SW2
RepID=C8S0W3_9RHOB
Length = 772
Score = 76.6 bits (187), Expect = 8e-13
Identities = 37/77 (48%), Positives = 52/77 (67%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
++D+K G EGTVT V FGAFV+ G + +GLVH+S+LA F K+ VV+ G V V+
Sbjct: 647 IKDLKPGMMLEGTVTNVAAFGAFVDIGVHQDGLVHVSQLADAFVKDPHAVVKAGDVVKVR 706
Query: 345 VLSVDAEKKRVSLELKS 395
V+ VD +KR+ L +KS
Sbjct: 707 VVEVDVARKRIGLTMKS 723
[248][TOP]
>UniRef100_C7IPQ4 RNA binding S1 domain protein n=1 Tax=Thermoanaerobacter
ethanolicus CCSD1 RepID=C7IPQ4_THEET
Length = 712
Score = 76.6 bits (187), Expect = 8e-13
Identities = 37/76 (48%), Positives = 52/76 (68%)
Frame = +3
Query: 165 LEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVK 344
+ ++K G E GTV V +FG FV+ G +T+GLVHIS+++ + K+ DVV G V VK
Sbjct: 637 INELKPGMELMGTVRNVTDFGCFVDIGVHTDGLVHISEMSQSYIKHPLDVVAVGDIVKVK 696
Query: 345 VLSVDAEKKRVSLELK 392
VLSVD E+ R+SL +K
Sbjct: 697 VLSVDIERNRISLSMK 712
[249][TOP]
>UniRef100_C4G634 Putative uncharacterized protein n=1 Tax=Abiotrophia defectiva ATCC
49176 RepID=C4G634_ABIDE
Length = 716
Score = 76.6 bits (187), Expect = 8e-13
Identities = 42/93 (45%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Frame = +3
Query: 123 AEAPAAEQAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLA-SGFTK 299
A+ PA + ++D+KEG +GTV V +FGAFV+ G + +GLVHIS+L+ F K
Sbjct: 622 ADLPAPILRTDVMDMKDLKEGMVMKGTVRNVIDFGAFVDIGVHQDGLVHISELSDKKFVK 681
Query: 300 NAKDVVQPGQKVTVKVLSVDAEKKRVSLELKSA 398
+ +VV G V VKV+ VD KKR+SL +K A
Sbjct: 682 HPLEVVSVGDIVDVKVIGVDIPKKRISLSIKQA 714
[250][TOP]
>UniRef100_C3BI75 30S ribosomal protein S1 n=1 Tax=Bacillus pseudomycoides DSM 12442
RepID=C3BI75_9BACI
Length = 382
Score = 76.6 bits (187), Expect = 8e-13
Identities = 40/85 (47%), Positives = 57/85 (67%)
Frame = +3
Query: 144 QAAKAIKLEDVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQP 323
++ K + +KEG EGTV + +FGAFVN G N +GLVHIS+++ + DV+
Sbjct: 176 ESKKKEAISSLKEGDVVEGTVQRLTDFGAFVNVG-NVDGLVHISQISHDRVEQPSDVLTQ 234
Query: 324 GQKVTVKVLSVDAEKKRVSLELKSA 398
GQ V VKVLSVDA+ +R+SL +K+A
Sbjct: 235 GQSVKVKVLSVDADTQRISLSIKAA 259
Score = 70.1 bits (170), Expect = 7e-11
Identities = 36/77 (46%), Positives = 49/77 (63%)
Frame = +3
Query: 171 DVKEGSEYEGTVTTVEEFGAFVNFGANTNGLVHISKLASGFTKNAKDVVQPGQKVTVKVL 350
+VK G EG V + FGAFV GLVH+S++A+ KN +V++ GQ+V VKVL
Sbjct: 270 EVKAGDIREGIVKRIVTFGAFVEILPGVEGLVHVSQIANRHVKNPNEVLEMGQEVKVKVL 329
Query: 351 SVDAEKKRVSLELKSAV 401
V A +KR+SL +K AV
Sbjct: 330 EVHAAEKRISLSIKEAV 346