AV640858 ( HCL023f03_r )

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[1][TOP]
>UniRef100_Q6Y683 41 kDa ribosome-associated protein n=1 Tax=Chlamydomonas
           reinhardtii RepID=Q6Y683_CHLRE
          Length = 439

 Score =  220 bits (561), Expect = 3e-56
 Identities = 109/109 (100%), Positives = 109/109 (100%)
 Frame = +3

Query: 48  MQSSMRARVAGGARRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHK 227
           MQSSMRARVAGGARRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHK
Sbjct: 1   MQSSMRARVAGGARRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHK 60

Query: 228 VTIMNDGDSDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRGTFDV 374
           VTIMNDGDSDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRGTFDV
Sbjct: 61  VTIMNDGDSDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRGTFDV 109

[2][TOP]
>UniRef100_A8IIK4 Chloroplast stem-loop-binding protein n=1 Tax=Chlamydomonas
           reinhardtii RepID=A8IIK4_CHLRE
          Length = 439

 Score =  220 bits (561), Expect = 3e-56
 Identities = 109/109 (100%), Positives = 109/109 (100%)
 Frame = +3

Query: 48  MQSSMRARVAGGARRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHK 227
           MQSSMRARVAGGARRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHK
Sbjct: 1   MQSSMRARVAGGARRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHK 60

Query: 228 VTIMNDGDSDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRGTFDV 374
           VTIMNDGDSDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRGTFDV
Sbjct: 61  VTIMNDGDSDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRGTFDV 109

[3][TOP]
>UniRef100_A1YQX4 Chloroplast ribosome-associated protein (Fragment) n=1 Tax=Volvox
           carteri f. nagariensis RepID=A1YQX4_VOLCA
          Length = 206

 Score =  174 bits (441), Expect = 3e-42
 Identities = 82/109 (75%), Positives = 92/109 (84%)
 Frame = +3

Query: 48  MQSSMRARVAGGARRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHK 227
           M + ++A  AGGARRA   AGRRL+VKVMN+NVLIANTKGGGHAFIGLYLAKELLKKGHK
Sbjct: 1   MHAQLKANRAGGARRAFAPAGRRLSVKVMNANVLIANTKGGGHAFIGLYLAKELLKKGHK 60

Query: 228 VTIMNDGDSDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRGTFDV 374
           VTIMNDGD  KLTKK P++KYS+L R G  + W DP KPSTYPRG+FDV
Sbjct: 61  VTIMNDGDESKLTKKTPFSKYSELARDGATIAWGDPTKPSTYPRGSFDV 109

[4][TOP]
>UniRef100_Q8GTK8 Os07g0212200 protein n=2 Tax=Oryza sativa RepID=Q8GTK8_ORYSJ
          Length = 392

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 49/113 (43%), Positives = 63/113 (55%), Gaps = 6/113 (5%)
 Frame = +3

Query: 54  SSMRARVAGGARRAVG--TAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHK 227
           ++ R   A  A R VG  T   +        +VLI NT GGGHA IG YLAK+LL  GH 
Sbjct: 41  AARRCGEAAAAPRRVGAVTVRAQAAAGAGKKSVLIVNTNGGGHAVIGFYLAKDLLAAGHA 100

Query: 228 VTIMNDGD--SDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRG--TFDV 374
           VT++  GD  SDK+ KK P++++S+L   G   VW DPA       G  +FDV
Sbjct: 101 VTVLTVGDEGSDKM-KKPPFSRFSELTSAGATTVWGDPADVGAAVGGGASFDV 152

[5][TOP]
>UniRef100_A5AWW0 Chromosome chr7 scaffold_31, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A5AWW0_VITVI
          Length = 397

 Score = 77.8 bits (190), Expect = 3e-13
 Identities = 43/89 (48%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
 Frame = +3

Query: 117 LTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKY 290
           L VK     VLI NT  GGHA IG Y AK+LL  GH+VTIM  G+  SDK+ KK P++++
Sbjct: 64  LNVKAQKKKVLIVNTNSGGHAVIGFYFAKQLLGSGHEVTIMTVGEENSDKM-KKPPFSRF 122

Query: 291 SDLERQGLNVVWADPAKPSTYPRG-TFDV 374
           S++   G   VW DPA+      G  FDV
Sbjct: 123 SEITSAGGKTVWGDPAEVGKVVAGAAFDV 151

[6][TOP]
>UniRef100_C5XDB8 Putative uncharacterized protein Sb02g006430 n=1 Tax=Sorghum
           bicolor RepID=C5XDB8_SORBI
          Length = 407

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 50/108 (46%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
 Frame = +3

Query: 75  AGGARRAVGTAGRRLTVKVM-----NSNVLIANTKGGGHAFIGLYLAKELLKKGHKVTIM 239
           A  ARR    A  R  VKV        +VLI NT  GGHA IG Y AKELL  GH VT++
Sbjct: 49  AVAARRRRRPAPARAGVKVRAEAAKKQSVLIVNTNSGGHAVIGFYFAKELLAAGHAVTVL 108

Query: 240 NDGD--SDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRG-TFDV 374
             GD  SDK+ KK P++++S+L   G   VW DPA       G +FDV
Sbjct: 109 TVGDEGSDKM-KKPPFSRFSELTSAGGKTVWGDPADVGAAVGGASFDV 155

[7][TOP]
>UniRef100_B9S425 NAD dependent epimerase/dehydratase, putative n=1 Tax=Ricinus
           communis RepID=B9S425_RICCO
          Length = 398

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 46/97 (47%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
 Frame = +3

Query: 102 TAGRRLTVKVM---NSNVLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLT 266
           +A    TVK        VLI NT  GGHA IG Y AKELL  GH+VTI   GD  SDK+ 
Sbjct: 63  SASSSFTVKASAAAKKKVLIVNTNSGGHAVIGFYFAKELLGSGHEVTIFTVGDENSDKM- 121

Query: 267 KKNPYAKYSDLERQGLNVVWADPAKPSTYPRG-TFDV 374
           KK P++++S++   G   VW DPA+      G TFDV
Sbjct: 122 KKPPFSRFSEIVSAGGKTVWGDPAEVGKVVEGATFDV 158

[8][TOP]
>UniRef100_Q9LYA9 Uncharacterized protein At3g63140, chloroplastic n=1
           Tax=Arabidopsis thaliana RepID=Y3314_ARATH
          Length = 406

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 50/130 (38%), Positives = 67/130 (51%), Gaps = 6/130 (4%)
 Frame = +3

Query: 3   PQITSGFGH*QVLDIMQSSMRARVAGGARRAVGTAGRRLTVKVMN----SNVLIANTKGG 170
           P  +S F     L    SS  + +    R +   + ++ TVK  +     NVLI NT  G
Sbjct: 34  PSSSSSFSS---LSSSSSSSSSLLTFSLRTSRRLSPQKFTVKASSVGEKKNVLIVNTNSG 90

Query: 171 GHAFIGLYLAKELLKKGHKVTIMNDGD-SDKLTKKNPYAKYSDLERQGLNVVWADPAKPS 347
           GHA IG Y AKELL  GH VTI+  GD S +  KK P+ ++S++   G   VW +PA  +
Sbjct: 91  GHAVIGFYFAKELLSAGHAVTILTVGDESSEKMKKPPFNRFSEIVSGGGKTVWGNPANVA 150

Query: 348 TYPRG-TFDV 374
               G TFDV
Sbjct: 151 NVVGGETFDV 160

[9][TOP]
>UniRef100_C1E7G0 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1E7G0_9CHLO
          Length = 371

 Score = 72.8 bits (177), Expect = 1e-11
 Identities = 46/109 (42%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
 Frame = +3

Query: 54  SSMRARVAGGARRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHKVT 233
           S   ARVA   RRA+      ++  V    VLI NT GGGHA IG +LAK L  +GH VT
Sbjct: 27  SGRNARVA---RRAIPAV---ISAAVAPQKVLIVNTNGGGHANIGFWLAKTLAAQGHSVT 80

Query: 234 IMNDGD-SDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRGT-FDV 374
           +   G   DK  +K P+  +++L   G+  VWADP + +T   G  FDV
Sbjct: 81  LNTIGSKDDKKMQKPPFTYFNELTSAGVQTVWADPGELATKAAGAQFDV 129

[10][TOP]
>UniRef100_C6TMG5 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6TMG5_SOYBN
          Length = 208

 Score = 70.9 bits (172), Expect = 4e-11
 Identities = 40/80 (50%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
 Frame = +3

Query: 144 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKYSDLERQGLN 317
           VLI NT  GGHA IG Y AKELL  GH VTI+  GD  SDK+ KK P+ ++S++   G  
Sbjct: 80  VLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGDEGSDKM-KKPPFNRFSEIVSAGGR 138

Query: 318 VVWADPAKPSTYPRG-TFDV 374
            VW +PA+  +   G  FDV
Sbjct: 139 TVWGNPAQVGSVVGGEVFDV 158

[11][TOP]
>UniRef100_B9GSN8 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GSN8_POPTR
          Length = 404

 Score = 70.9 bits (172), Expect = 4e-11
 Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
 Frame = +3

Query: 144 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKYSDLERQGLN 317
           VLI NT  GGHA IG Y AKELL  GH+VTI+  G+  SDK+ KK P++++S++   G  
Sbjct: 80  VLIVNTNSGGHAVIGFYFAKELLGSGHEVTILTVGEESSDKM-KKPPFSRFSEIVSAGGK 138

Query: 318 VVWADPAKPSTYPRG-TFDV 374
            VW +PA+      G  FDV
Sbjct: 139 TVWGNPAEVGKVVEGAAFDV 158

[12][TOP]
>UniRef100_B9H883 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
           RepID=B9H883_POPTR
          Length = 377

 Score = 70.1 bits (170), Expect = 7e-11
 Identities = 38/80 (47%), Positives = 52/80 (65%), Gaps = 3/80 (3%)
 Frame = +3

Query: 144 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKYSDLERQGLN 317
           +LI NT  GGHA IG Y AKELL  GH+V+I+  G+  SDK+ KK P++++S++   G  
Sbjct: 53  ILIVNTNSGGHAVIGFYFAKELLGSGHEVSILTVGEESSDKM-KKPPFSRFSEIVGAGGK 111

Query: 318 VVWADPAKPSTYPRG-TFDV 374
            VW +PA+      G TFDV
Sbjct: 112 TVWGNPAEVGKAVEGATFDV 131

[13][TOP]
>UniRef100_O24365 Chloroplast mRNA-binding protein CSP41 (Fragment) n=1 Tax=Spinacia
           oleracea RepID=O24365_SPIOL
          Length = 415

 Score = 69.7 bits (169), Expect = 9e-11
 Identities = 39/80 (48%), Positives = 48/80 (60%), Gaps = 3/80 (3%)
 Frame = +3

Query: 144 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKYSDLERQGLN 317
           VLI NT  GGHA IG Y AKELL  GH+VT+   GD  SDK+ KK P+ ++S++   G  
Sbjct: 92  VLIVNTNSGGHAVIGFYFAKELLGSGHQVTVFTVGDEGSDKM-KKPPFTRFSEITSAGGK 150

Query: 318 VVWADPAKPSTYPRG-TFDV 374
            VW +PA       G  FDV
Sbjct: 151 TVWGNPADIGNVVGGEAFDV 170

[14][TOP]
>UniRef100_Q7X998 MRNA-binding protein (Fragment) n=1 Tax=Nicotiana tabacum
           RepID=Q7X998_TOBAC
          Length = 405

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 35/67 (52%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
 Frame = +3

Query: 144 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKYSDLERQGLN 317
           VLI NT  GGHA IG Y AKELL  GH VTI+  G+  SDK+ KK P+ ++S++   G  
Sbjct: 81  VLIVNTNSGGHAVIGFYFAKELLGSGHDVTILTVGEESSDKM-KKTPFNRFSEITGAGGR 139

Query: 318 VVWADPA 338
            +W DPA
Sbjct: 140 TIWGDPA 146

[15][TOP]
>UniRef100_C6TM93 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6TM93_SOYBN
          Length = 403

 Score = 69.3 bits (168), Expect = 1e-10
 Identities = 39/80 (48%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
 Frame = +3

Query: 144 VLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKYSDLERQGLN 317
           VLI NT  GGHA IG Y AKELL  GH VTI+  G+  SDK+ KK P+ ++S++   G  
Sbjct: 79  VLIVNTNSGGHAIIGFYFAKELLGAGHSVTILTVGEEGSDKM-KKPPFNRFSEIVSAGGR 137

Query: 318 VVWADPAKPSTYPRG-TFDV 374
            VW +PA+  +   G  FDV
Sbjct: 138 TVWGNPAEVGSVVGGEVFDV 157

[16][TOP]
>UniRef100_Q9XEJ6 MRNA binding protein n=1 Tax=Solanum lycopersicum
           RepID=Q9XEJ6_SOLLC
          Length = 407

 Score = 68.9 bits (167), Expect = 2e-10
 Identities = 35/72 (48%), Positives = 45/72 (62%), Gaps = 2/72 (2%)
 Frame = +3

Query: 129 VMNSNVLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLTKKNPYAKYSDLE 302
           V    VLI NT  GGHA IG Y AKELL  GH VT++  G+  SDK+ KK P+ ++S++ 
Sbjct: 78  VEKKKVLIVNTNSGGHAVIGFYFAKELLGSGHDVTVLTVGEESSDKM-KKTPFTRFSEIT 136

Query: 303 RQGLNVVWADPA 338
             G   VW +PA
Sbjct: 137 GAGGRTVWGNPA 148

[17][TOP]
>UniRef100_B8LL40 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=B8LL40_PICSI
          Length = 423

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 8/85 (9%)
 Frame = +3

Query: 111 RRLTVKVM------NSNVLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGD--SDKLT 266
           R LTVK M      +  VL+ NT  GGHA IG + AK+L+  GH+VT+   G+  S+K+T
Sbjct: 77  RSLTVKAMAAIGEKSKKVLVVNTNSGGHAMIGFWFAKDLISAGHQVTVFTVGEEASEKMT 136

Query: 267 KKNPYAKYSDLERQGLNVVWADPAK 341
           K  P++++S+L   G+   W  PA+
Sbjct: 137 KP-PFSRFSELRAIGVQTTWGKPAE 160

[18][TOP]
>UniRef100_Q00VC0 PREDICTED OJ1664_D08.105 gene product (ISS) n=1 Tax=Ostreococcus
           tauri RepID=Q00VC0_OSTTA
          Length = 358

 Score = 67.8 bits (164), Expect = 4e-10
 Identities = 43/115 (37%), Positives = 58/115 (50%), Gaps = 2/115 (1%)
 Frame = +3

Query: 36  VLDIMQSSMRARVAGGARRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLK 215
           V D+++     R      RA G      + K     VLI NT GGGHA IG +LAK L  
Sbjct: 4   VSDVLRVRSTTRTPSRNARAHGVVDVSASGK---KKVLIVNTNGGGHANIGFWLAKTLAG 60

Query: 216 KGHKVTIMNDG-DSDKLTKKNPYAKYSDLERQGLNVVWADPAKPSTYPRGT-FDV 374
            GH+VT+   G + DK   K P++ + ++   G+   WADPA  +T   G  FDV
Sbjct: 61  AGHEVTMNVVGAEDDKKMAKTPFSLFDEIRSMGVTTTWADPADVATKHAGAKFDV 115

[19][TOP]
>UniRef100_A9S841 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9S841_PHYPA
          Length = 412

 Score = 67.0 bits (162), Expect = 6e-10
 Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 5/93 (5%)
 Frame = +3

Query: 75  AGGARRAVGTAGRRLTVKVM---NSNVLIANTKGGGHAFIGLYLAKELLKKGHKVTIMND 245
           + G   +    G  L V+     +  VLI NT  GGHA IG + AK+L+  GH VTI+  
Sbjct: 60  SNGVSTSKSNRGAALVVRAAAGESKKVLIVNTNSGGHAVIGFWTAKDLVDAGHSVTILTV 119

Query: 246 GD--SDKLTKKNPYAKYSDLERQGLNVVWADPA 338
           G+  SDK+ KK P++++++L   G+  VW +P+
Sbjct: 120 GEELSDKM-KKQPFSRFNELREIGVETVWGEPS 151

[20][TOP]
>UniRef100_C1N8M5 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N8M5_9CHLO
          Length = 362

 Score = 66.2 bits (160), Expect = 1e-09
 Identities = 41/98 (41%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
 Frame = +3

Query: 87  RRAVGTAGRRLTVKVMNSNVLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDGDS-DKL 263
           RRA G   RR       + VLI NT GGGHA IG +LAK L   GH VT+   G + DK 
Sbjct: 20  RRANGRTARR-------AKVLIVNTNGGGHANIGFWLAKTLAAHGHAVTLCVVGTADDKK 72

Query: 264 TKKNPYAKYSDLERQGLNVVWADPAKPSTYP-RGTFDV 374
            +K P+  + +L   G+  +WA+P   +T P +  FDV
Sbjct: 73  MQKPPFTYFGELTSAGVKTMWANPNDLATLPGQPEFDV 110

[21][TOP]
>UniRef100_A4S772 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus
           CCE9901 RepID=A4S772_OSTLU
          Length = 333

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 2/80 (2%)
 Frame = +3

Query: 141 NVLIANTKGGGHAFIGLYLAKELLKKGHKVTIMNDG-DSDKLTKKNPYAKYSDLERQGLN 317
           +VLI NT GGGHA IG +LAK L   GH VT+   G + DK   K P++ + ++   G+ 
Sbjct: 11  SVLIVNTNGGGHANIGFWLAKTLAGAGHDVTMNVVGAEDDKKMAKTPFSLFDEIRGMGVK 70

Query: 318 VVWADPAKPSTYPRGT-FDV 374
            VWA+P + ++   G  FDV
Sbjct: 71  TVWANPDEVASKHAGAKFDV 90