AV640847 ( HCL023d03_r )

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[1][TOP]
>UniRef100_Q6SA05 Rubisco activase n=1 Tax=Chlamydomonas reinhardtii
           RepID=Q6SA05_CHLRE
          Length = 408

 Score =  298 bits (764), Expect = 1e-79
 Identities = 150/150 (100%), Positives = 150/150 (100%)
 Frame = +3

Query: 45  MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 224
           MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT
Sbjct: 1   MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 60

Query: 225 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 404
           RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK
Sbjct: 61  RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 120

Query: 405 NFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           NFMDLPKIKVPLILGIWGGKGQGKTFQCAL
Sbjct: 121 NFMDLPKIKVPLILGIWGGKGQGKTFQCAL 150

[2][TOP]
>UniRef100_P23489 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Chlamydomonas reinhardtii RepID=RCA_CHLRE
          Length = 408

 Score =  296 bits (759), Expect = 4e-79
 Identities = 149/150 (99%), Positives = 149/150 (99%)
 Frame = +3

Query: 45  MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 224
           MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVA SRKQMGRWRSIDAGVDASDDQQDIT
Sbjct: 1   MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVAPSRKQMGRWRSIDAGVDASDDQQDIT 60

Query: 225 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 404
           RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK
Sbjct: 61  RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 120

Query: 405 NFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           NFMDLPKIKVPLILGIWGGKGQGKTFQCAL
Sbjct: 121 NFMDLPKIKVPLILGIWGGKGQGKTFQCAL 150

[3][TOP]
>UniRef100_O04772 Rubisco activase n=1 Tax=Chlorococcum littorale RepID=O04772_CHLLO
          Length = 403

 Score =  204 bits (520), Expect = 2e-51
 Identities = 102/150 (68%), Positives = 121/150 (80%)
 Frame = +3

Query: 45  MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 224
           MQ+ MK++A    +  GA+ A ++VR   +    +S+ Q GRW +IDAG D SDDQQDIT
Sbjct: 1   MQMQMKNTAF---KATGAKTAPKAVR---VPACKASKSQAGRWAAIDAGNDMSDDQQDIT 54

Query: 225 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 404
           RGR+MVD LFQG    GGTH+AVLSS++YLS +  +FNN+EDGFYISPAFLDKMTIH+AK
Sbjct: 55  RGRDMVDSLFQGPGSGGGTHSAVLSSEDYLSTASRNFNNVEDGFYISPAFLDKMTIHVAK 114

Query: 405 NFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           NFMDLPKIKVPLILGIWGGKGQGKTFQCAL
Sbjct: 115 NFMDLPKIKVPLILGIWGGKGQGKTFQCAL 144

[4][TOP]
>UniRef100_C1MPQ3 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast
           n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MPQ3_9CHLO
          Length = 419

 Score =  155 bits (392), Expect = 1e-36
 Identities = 83/156 (53%), Positives = 102/156 (65%), Gaps = 8/156 (5%)
 Frame = +3

Query: 51  VTMKSSAVSGQRVGGARVATRSVRRAQLQVVASS-------RKQMGRWRSIDAGVDASDD 209
           VTM S      ++G    A   V R QL  V +        + QM RW+ +D   D SDD
Sbjct: 4   VTMSSMIAPVAKIG----AVGKVARHQLGSVPNQLGKGNGMKVQMSRWKGMDE--DISDD 57

Query: 210 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIED-GFYISPAFLDKM 386
           QQDI RGR MVD  FQGGFG GGT NA++   +Y+S      +N+ D G+YIS +++DK+
Sbjct: 58  QQDIARGRGMVDSKFQGGFGLGGTQNAIMQGSDYVSDGFKDLSNMSDEGYYISKSYMDKI 117

Query: 387 TIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           T+H+AKNFMDLPKIKVPLILGIWGGKGQGKTFQ  L
Sbjct: 118 TVHVAKNFMDLPKIKVPLILGIWGGKGQGKTFQSTL 153

[5][TOP]
>UniRef100_C1E4S4 Ribulose bisphosphate carboxylase/oxygenase activase,chloroplast
           n=1 Tax=Micromonas sp. RCC299 RepID=C1E4S4_9CHLO
          Length = 413

 Score =  154 bits (390), Expect = 2e-36
 Identities = 75/117 (64%), Positives = 87/117 (74%), Gaps = 1/117 (0%)
 Frame = +3

Query: 147 SSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSR 326
           S    M RW+ +D   D SDDQQDI RGR MVD  FQGGFG GGTHNAV+SS +Y+S   
Sbjct: 38  SKTVMMSRWKGMDE--DISDDQQDIARGRNMVDSKFQGGFGLGGTHNAVMSSSDYVSDGF 95

Query: 327 ASFNNIED-GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
              +N+ D G+YIS  F+D+  +HIAKNFMDLPKIKVPLILG+WGGKGQGKTFQ  L
Sbjct: 96  KDVSNMTDEGYYISKGFMDRFCVHIAKNFMDLPKIKVPLILGVWGGKGQGKTFQSML 152

[6][TOP]
>UniRef100_A4RW20 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4RW20_OSTLU
          Length = 415

 Score =  153 bits (386), Expect = 7e-36
 Identities = 78/153 (50%), Positives = 102/153 (66%), Gaps = 5/153 (3%)
 Frame = +3

Query: 51  VTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRK-QMGRWRSIDAGVDASDDQQDITR 227
           +T     V         VA ++   A++  V++  K +M RW+ +D  +D SDDQQDI R
Sbjct: 4   ITQPRCGVKANATAKRAVAPKTFLGARVSSVSNGSKVEMSRWKGMD--MDISDDQQDIAR 61

Query: 228 GREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASF----NNIEDGFYISPAFLDKMTIH 395
           GR MVD  FQG  G GGTHNAV+SSQ+YLS    ++    N   + FYISP+++DK+ +H
Sbjct: 62  GRNMVDSKFQGATGIGGTHNAVMSSQDYLSAGMKTYSAHDNITTENFYISPSYMDKVIVH 121

Query: 396 IAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +AKNFM LPKIKVP+ILG+WGGKGQGKTFQ  L
Sbjct: 122 VAKNFMKLPKIKVPVILGVWGGKGQGKTFQSDL 154

[7][TOP]
>UniRef100_Q01AY1 RuBisCO activase (IC) n=1 Tax=Ostreococcus tauri RepID=Q01AY1_OSTTA
          Length = 407

 Score =  152 bits (384), Expect = 1e-35
 Identities = 83/157 (52%), Positives = 105/157 (66%), Gaps = 4/157 (2%)
 Frame = +3

Query: 36  LRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQ 215
           +R    T K  AV+ +   GARV++         V   S+ +M RW+ +D  +D SDDQQ
Sbjct: 1   MRQANATTKR-AVAPKTFLGARVSS---------VSNGSKVEMSRWKGMD--MDISDDQQ 48

Query: 216 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASF----NNIEDGFYISPAFLDK 383
           DI RG+ MVD  FQGG G GGTHNAV+SSQ+YLS    ++    N   + FYIS +++DK
Sbjct: 49  DIARGKNMVDSKFQGGAGIGGTHNAVMSSQDYLSAGMKTYDGHDNITAENFYISKSYMDK 108

Query: 384 MTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           + +HIAKNFM LPKIKVPLILG+WGGKGQGKTFQ  L
Sbjct: 109 VVVHIAKNFMQLPKIKVPLILGVWGGKGQGKTFQSDL 145

[8][TOP]
>UniRef100_A9RES5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RES5_PHYPA
          Length = 477

 Score =  152 bits (384), Expect = 1e-35
 Identities = 87/174 (50%), Positives = 113/174 (64%), Gaps = 19/174 (10%)
 Frame = +3

Query: 30  SALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVAS-----------------SRK 158
           +AL++  V   +S V+   VG + V + +    + +V AS                 S K
Sbjct: 6   TALQSASVAQVNSGVAPSTVGKSAVPSSAFLGCKSKVPASAALGLAKGKSRVVAEAESSK 65

Query: 159 QMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN 338
           ++ RW  +  G D SDDQQDI RG+ +VD LFQG  G G T NAVLSS +Y+SQ + +++
Sbjct: 66  KVDRWAGL--GTDISDDQQDIQRGKGLVDALFQGPQGMG-TQNAVLSSWDYISQGQRTYS 122

Query: 339 --NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
             NI+DG YI+PAF+DK+ IHIAKNFMDLP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 123 MDNIKDGLYIAPAFMDKLVIHIAKNFMDLPGIKVPLILGIWGGKGQGKSFQCEL 176

[9][TOP]
>UniRef100_O98997 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Vigna radiata var. radiata RepID=RCA_PHAAU
          Length = 439

 Score =  151 bits (381), Expect = 3e-35
 Identities = 79/139 (56%), Positives = 96/139 (69%), Gaps = 2/139 (1%)
 Frame = +3

Query: 84  RVGGARVATRSVR--RAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQ 257
           RV  ++V   S +   A+ ++  S +    RW+ +    D SDDQQDITRG+ MVD LFQ
Sbjct: 44  RVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGL--AYDISDDQQDITRGKGMVDPLFQ 101

Query: 258 GGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVP 437
               AG TH AV+SS EYLS      +NI+DGFYI+PAFLDK+ +HI KNFM LP IKVP
Sbjct: 102 APMDAG-THYAVMSSYEYLSTGLRQLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVP 160

Query: 438 LILGIWGGKGQGKTFQCAL 494
           LILGIWGGKGQGK+FQC L
Sbjct: 161 LILGIWGGKGQGKSFQCEL 179

[10][TOP]
>UniRef100_A9TJI2 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TJI2_PHYPA
          Length = 471

 Score =  150 bits (378), Expect = 6e-35
 Identities = 83/152 (54%), Positives = 107/152 (70%), Gaps = 5/152 (3%)
 Frame = +3

Query: 54  TMKSSAVSGQRVGGARVATRSVRRAQLQVVA---SSRKQMGRWRSIDAGVDASDDQQDIT 224
           T+ SSA  G +   +   T  +   + +VVA   SS+ ++ RW  +  G D SDDQQDI 
Sbjct: 21  TVPSSAFFGCKSKVSANGTLGIANGKSRVVAEAESSKTKVDRWAGL--GNDISDDQQDIQ 78

Query: 225 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHI 398
           RG+ MVD LFQG  G G T NA++SS  Y+SQ + +++  NI+DG YI+PAF+DK+ IHI
Sbjct: 79  RGKGMVDALFQGAQGLG-TQNAIMSSWGYVSQGQRTYSMDNIKDGLYIAPAFMDKLVIHI 137

Query: 399 AKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           AKNFM+LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 138 AKNFMNLPGIKVPLILGIWGGKGQGKSFQCEL 169

[11][TOP]
>UniRef100_B9HMK4 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
           RepID=B9HMK4_POPTR
          Length = 438

 Score =  149 bits (377), Expect = 7e-35
 Identities = 83/157 (52%), Positives = 103/157 (65%), Gaps = 10/157 (6%)
 Frame = +3

Query: 54  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVASS-----RKQMGRWRSIDAGVDASDD 209
           T+ +SA  G   ++V  +R     +     +VVA       + +  RW  +    D SDD
Sbjct: 26  TVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVT--DMSDD 83

Query: 210 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDK 383
           QQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DGFYI+PAF+DK
Sbjct: 84  QQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGFYIAPAFMDK 142

Query: 384 MTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           + +HI+KNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 143 IVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCEL 179

[12][TOP]
>UniRef100_A9PFQ2 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=A9PFQ2_POPTR
          Length = 475

 Score =  149 bits (377), Expect = 7e-35
 Identities = 83/157 (52%), Positives = 103/157 (65%), Gaps = 10/157 (6%)
 Frame = +3

Query: 54  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVASS-----RKQMGRWRSIDAGVDASDD 209
           T+ +SA  G   ++V  +R     +     +VVA       + +  RW  +    D SDD
Sbjct: 26  TVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVT--DMSDD 83

Query: 210 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDK 383
           QQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DGFYI+PAF+DK
Sbjct: 84  QQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGFYIAPAFMDK 142

Query: 384 MTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           + +HI+KNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 143 IVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCEL 179

[13][TOP]
>UniRef100_O64981 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Phaseolus vulgaris RepID=RCA_PHAVU
          Length = 441

 Score =  149 bits (375), Expect = 1e-34
 Identities = 82/156 (52%), Positives = 106/156 (67%), Gaps = 12/156 (7%)
 Frame = +3

Query: 63  SSAVSG---QRVGGARVATRSVRRAQLQVVASSRK-------QMGRWRSIDAGVDASDDQ 212
           SSA  G   ++V  +RV    +     ++VA+ ++       +  RWR +    D SDDQ
Sbjct: 29  SSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGL--AYDVSDDQ 86

Query: 213 QDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKM 386
           QDITRG+ +VD LFQ    AG TH AV+SS +YLS    + +F+NI+DGFYI+PAFLDK+
Sbjct: 87  QDITRGKGLVDSLFQAPMDAG-THYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKL 145

Query: 387 TIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
            +HIAKNFM LP IKVPLILG+WGGKGQGK+FQC L
Sbjct: 146 VVHIAKNFMTLPNIKVPLILGVWGGKGQGKSFQCEL 181

[14][TOP]
>UniRef100_B1PDJ9 Chloroplast rubisco activase n=1 Tax=Capsicum annuum
           RepID=B1PDJ9_CAPAN
          Length = 439

 Score =  148 bits (374), Expect = 2e-34
 Identities = 76/145 (52%), Positives = 100/145 (68%), Gaps = 4/145 (2%)
 Frame = +3

Query: 72  VSGQRVGGARVATRSVRRAQLQVVASSRKQMG--RWRSIDAGVDASDDQQDITRGREMVD 245
           V G+ +   +V+ RS+R    +     +KQ    RW+ +  G D SDDQQDI RG+ MVD
Sbjct: 40  VYGKGISSPKVSNRSLRIVAEEKEIDEKKQTDGDRWKGL--GTDVSDDQQDIARGKGMVD 97

Query: 246 DLFQGGFGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDL 419
            LFQ   G G TH+A+++S EYLSQ   + S +N  DGFYI+PAF+DK+ +HI KNF+ L
Sbjct: 98  SLFQAPTGTG-THHAIMNSYEYLSQGLKQYSMDNKLDGFYIAPAFMDKLVVHITKNFLQL 156

Query: 420 PKIKVPLILGIWGGKGQGKTFQCAL 494
           P IK+PLILG+WGGKGQGK+FQC L
Sbjct: 157 PNIKIPLILGVWGGKGQGKSFQCEL 181

[15][TOP]
>UniRef100_A9PJF4 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
           Populus deltoides RepID=A9PJF4_9ROSI
          Length = 461

 Score =  148 bits (374), Expect = 2e-34
 Identities = 82/157 (52%), Positives = 103/157 (65%), Gaps = 10/157 (6%)
 Frame = +3

Query: 54  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVASS-----RKQMGRWRSIDAGVDASDD 209
           T+ +SA  G   ++V  +R     +     +VVA       + +  RW  +    D SDD
Sbjct: 26  TVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVT--DMSDD 83

Query: 210 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDK 383
           QQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DG+YI+PAF+DK
Sbjct: 84  QQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGYYIAPAFMDK 142

Query: 384 MTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           + +HI+KNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 143 IVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCEL 179

[16][TOP]
>UniRef100_A9PJ06 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
           Populus deltoides RepID=A9PJ06_9ROSI
          Length = 476

 Score =  148 bits (374), Expect = 2e-34
 Identities = 82/154 (53%), Positives = 102/154 (66%), Gaps = 7/154 (4%)
 Frame = +3

Query: 54  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVAS--SRKQMGRWRSIDAGVDASDDQQD 218
           T+ +SA  G   ++V  +R     +     +VVA    +KQ  + R      D SDDQQD
Sbjct: 26  TVPNSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEYDEKKQTDKDRWGGLVTDMSDDQQD 85

Query: 219 ITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTI 392
           ITRG+ MVD LFQ   G G THN +LSS EYLSQ   ++N  N  DG+YI+PAF+DK+ +
Sbjct: 86  ITRGKGMVDSLFQAPQGTG-THNPILSSYEYLSQGLRTYNLDNNMDGYYIAPAFMDKLVV 144

Query: 393 HIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           HI+KNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 145 HISKNFMSLPNIKVPLILGIWGGKGQGKSFQCEL 178

[17][TOP]
>UniRef100_Q40460 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic n=1 Tax=Nicotiana tabacum RepID=RCA1_TOBAC
          Length = 442

 Score =  148 bits (373), Expect = 2e-34
 Identities = 80/145 (55%), Positives = 98/145 (67%), Gaps = 4/145 (2%)
 Frame = +3

Query: 72  VSGQRVGGARVATRSVRRAQLQVVASSRKQMG--RWRSIDAGVDASDDQQDITRGREMVD 245
           V G+ V   +V  +S+R    Q+    +KQ    RW+ +    D SDDQQDITRG+ MVD
Sbjct: 40  VYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQ--DFSDDQQDITRGKGMVD 97

Query: 246 DLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDL 419
            LFQ   G G TH+AVL S EY+SQ    +N  N  DGFYI+PAF+DK+ +HI KNF+ L
Sbjct: 98  SLFQAPTGTG-THHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKL 156

Query: 420 PKIKVPLILGIWGGKGQGKTFQCAL 494
           P IKVPLILGIWGGKGQGK+FQC L
Sbjct: 157 PNIKVPLILGIWGGKGQGKSFQCEL 181

[18][TOP]
>UniRef100_C5Y1T6 Putative uncharacterized protein Sb05g027880 n=1 Tax=Sorghum
           bicolor RepID=C5Y1T6_SORBI
          Length = 473

 Score =  147 bits (370), Expect = 5e-34
 Identities = 84/168 (50%), Positives = 107/168 (63%), Gaps = 4/168 (2%)
 Frame = +3

Query: 3   STTFRPFIQSALRTMQ-VTMKSSAVSGQRVGGAR--VATRSVRRAQLQVVASSRK-QMGR 170
           ST    F+ S     Q +T+ S     Q   G R  +  R++     Q V  +++ +  R
Sbjct: 19  STAANSFLGSNNNNKQKLTVSSIRKKKQHQQGGRGLIIIRAMAAVNKQEVDETKQTEQDR 78

Query: 171 WRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIED 350
           WR +    D SDDQQDITRG+ M+D LFQ   G  GTH AVLSS +Y+SQ    +N + D
Sbjct: 79  WRGL--AYDTSDDQQDITRGKGMIDSLFQAPMG-DGTHVAVLSSYDYISQGLRQYNTM-D 134

Query: 351 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           G+YI+PAF+DK+ +HIAKNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 135 GYYIAPAFMDKLVLHIAKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 182

[19][TOP]
>UniRef100_Q40565 Ribulose bisphosphate carboxylase/oxygenase activase 2,
           chloroplastic n=1 Tax=Nicotiana tabacum RepID=RCA2_TOBAC
          Length = 439

 Score =  146 bits (369), Expect = 6e-34
 Identities = 79/145 (54%), Positives = 98/145 (67%), Gaps = 4/145 (2%)
 Frame = +3

Query: 72  VSGQRVGGARVATRSVRRAQLQVVASSRKQM--GRWRSIDAGVDASDDQQDITRGREMVD 245
           V G+ V   +V  RS+R A  +  A  +KQ    RW+ +    D SDDQQDI RG+ MVD
Sbjct: 40  VYGKGVSSPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQ--DFSDDQQDIARGKGMVD 97

Query: 246 DLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDL 419
            LFQ   G G TH+AVL S EY+SQ    +N  N  DGFYI+P+F+DK+ +HI KNF+ L
Sbjct: 98  SLFQAPTGTG-THHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKL 156

Query: 420 PKIKVPLILGIWGGKGQGKTFQCAL 494
           P IKVPLILG+WGGKGQGK+FQC L
Sbjct: 157 PNIKVPLILGVWGGKGQGKSFQCEL 181

[20][TOP]
>UniRef100_Q9M4V3 Ribulose bisphosphate carboxylase activase B n=1 Tax=Triticum
           aestivum RepID=Q9M4V3_WHEAT
          Length = 432

 Score =  146 bits (368), Expect = 8e-34
 Identities = 76/139 (54%), Positives = 96/139 (69%), Gaps = 4/139 (2%)
 Frame = +3

Query: 90  GGARVATRSVRR--AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGG 263
           GG ++  R VR   A+ ++    +    RW+ +    D SDDQQDITRG+ +VD LFQ  
Sbjct: 36  GGNKINNRVVRAMAAKKELDEGKQTDADRWKGL--AYDISDDQQDITRGKGIVDSLFQAP 93

Query: 264 FGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVP 437
            G  GTH A+LSS EY+SQ   +  F+N  DG YI+PAF+DK+ +H+AKNFM LP IKVP
Sbjct: 94  MG-DGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVP 152

Query: 438 LILGIWGGKGQGKTFQCAL 494
           LILGIWGGKGQGK+FQC L
Sbjct: 153 LILGIWGGKGQGKSFQCEL 171

[21][TOP]
>UniRef100_Q9ATB9 Rubisco activase (Fragment) n=1 Tax=Zantedeschia aethiopica
           RepID=Q9ATB9_ZANAE
          Length = 435

 Score =  146 bits (368), Expect = 8e-34
 Identities = 80/166 (48%), Positives = 105/166 (63%), Gaps = 2/166 (1%)
 Frame = +3

Query: 3   STTFRPFIQSALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSI 182
           S T   F+ ++L+T+  ++          G  R +T +++     +  S + +  RW  +
Sbjct: 23  SVTRSGFLGTSLKTVNPSL----------GHGRTSTGTLKVMAADLDESKQTKTDRWAGL 72

Query: 183 DAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGF 356
               D SDDQQDITRG+ MVD LFQ   G  GTHN VLSS EY+S    SFN  N  +G 
Sbjct: 73  YT--DTSDDQQDITRGKGMVDSLFQAPMG-DGTHNPVLSSYEYISTGLRSFNLDNTVNGL 129

Query: 357 YISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           YI+PAF+DK+ +HI KNFM+LP IK+PLILGIWGGKGQGK+FQC L
Sbjct: 130 YIAPAFMDKLVVHITKNFMNLPNIKIPLILGIWGGKGQGKSFQCEL 175

[22][TOP]
>UniRef100_Q42450 Ribulose bisphosphate carboxylase/oxygenase activase B,
           chloroplastic n=1 Tax=Hordeum vulgare RepID=RCAB_HORVU
          Length = 425

 Score =  146 bits (368), Expect = 8e-34
 Identities = 76/139 (54%), Positives = 97/139 (69%), Gaps = 4/139 (2%)
 Frame = +3

Query: 90  GGARVATRSVR--RAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGG 263
           GG ++ +R VR   A+ ++    +    RW+ +    D SDDQQDITRG+ +VD LFQ  
Sbjct: 30  GGNKMKSRVVRVMAAKKELDQGKQTDADRWKGL--AYDISDDQQDITRGKGIVDSLFQAP 87

Query: 264 FGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVP 437
            G  GTH A+LSS EY+SQ   +  F+N  DG YI+PAF+DK+ +H+AKNFM LP IKVP
Sbjct: 88  MG-DGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVP 146

Query: 438 LILGIWGGKGQGKTFQCAL 494
           LILGIWGGKGQGK+FQC L
Sbjct: 147 LILGIWGGKGQGKSFQCEL 165

[23][TOP]
>UniRef100_Q941B7 At2g39730/T5I7.3 n=1 Tax=Arabidopsis thaliana RepID=Q941B7_ARATH
          Length = 474

 Score =  145 bits (367), Expect = 1e-33
 Identities = 72/111 (64%), Positives = 85/111 (76%), Gaps = 2/111 (1%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 341
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           + DGFYI+PAF+DK+ +HI KNF+ LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCEL 177

[24][TOP]
>UniRef100_Q8H172 At2g39730/T5I7.3 n=1 Tax=Arabidopsis thaliana RepID=Q8H172_ARATH
          Length = 474

 Score =  145 bits (367), Expect = 1e-33
 Identities = 72/111 (64%), Positives = 85/111 (76%), Gaps = 2/111 (1%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 341
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           + DGFYI+PAF+DK+ +HI KNF+ LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCEL 177

[25][TOP]
>UniRef100_Q3EBJ5 Putative uncharacterized protein At2g39730.3 n=1 Tax=Arabidopsis
           thaliana RepID=Q3EBJ5_ARATH
          Length = 441

 Score =  145 bits (367), Expect = 1e-33
 Identities = 72/111 (64%), Positives = 85/111 (76%), Gaps = 2/111 (1%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 341
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           + DGFYI+PAF+DK+ +HI KNF+ LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCEL 177

[26][TOP]
>UniRef100_P10896-2 Isoform Short of Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic n=1 Tax=Arabidopsis thaliana
           RepID=P10896-2
          Length = 446

 Score =  145 bits (367), Expect = 1e-33
 Identities = 72/111 (64%), Positives = 85/111 (76%), Gaps = 2/111 (1%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 341
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           + DGFYI+PAF+DK+ +HI KNF+ LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCEL 177

[27][TOP]
>UniRef100_P10896 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Arabidopsis thaliana RepID=RCA_ARATH
          Length = 474

 Score =  145 bits (367), Expect = 1e-33
 Identities = 72/111 (64%), Positives = 85/111 (76%), Gaps = 2/111 (1%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 341
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           + DGFYI+PAF+DK+ +HI KNF+ LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIWGGKGQGKSFQCEL 177

[28][TOP]
>UniRef100_Q9ATC2 Rubisco activase (Fragment) n=2 Tax=Zantedeschia aethiopica
           RepID=Q9ATC2_ZANAE
          Length = 436

 Score =  145 bits (366), Expect = 1e-33
 Identities = 75/138 (54%), Positives = 94/138 (68%), Gaps = 2/138 (1%)
 Frame = +3

Query: 87  VGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGF 266
           +G  R +T +++     +  S + +  RW  +    D SDDQQDITRG+ MVD LFQ   
Sbjct: 5   LGHGRTSTGTLKVMAADLDESKQTKTDRWAGLYT--DTSDDQQDITRGKGMVDSLFQAPM 62

Query: 267 GAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPL 440
           G  GTHN VLSS EY+S    SFN  N  +G YI+PAF+DK+ +HI KNFM+LP IK+PL
Sbjct: 63  G-DGTHNPVLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLPNIKIPL 121

Query: 441 ILGIWGGKGQGKTFQCAL 494
           ILGIWGGKGQGK+FQC L
Sbjct: 122 ILGIWGGKGQGKSFQCEL 139

[29][TOP]
>UniRef100_Q9AXG0 Ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2
           (Fragment) n=1 Tax=Gossypium hirsutum RepID=Q9AXG0_GOSHI
          Length = 435

 Score =  145 bits (365), Expect = 2e-33
 Identities = 73/128 (57%), Positives = 92/128 (71%), Gaps = 2/128 (1%)
 Frame = +3

Query: 117 VRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVL 296
           V  A+ ++   ++ +  RW+ +    D SDDQQDITRG+ MVD LFQ      GTH AV+
Sbjct: 14  VMAAEKEIDEETQTEKDRWKGL--AYDISDDQQDITRGKGMVDSLFQAPMN-DGTHYAVM 70

Query: 297 SSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQ 470
           SS EY+SQ   ++N  N  DGFYI+PAF+DK+ +HI+KNFM LP IKVPLILGIWGGKGQ
Sbjct: 71  SSYEYISQGLKTYNLDNNMDGFYIAPAFMDKLVVHISKNFMSLPNIKVPLILGIWGGKGQ 130

Query: 471 GKTFQCAL 494
           GK+FQC L
Sbjct: 131 GKSFQCEL 138

[30][TOP]
>UniRef100_C5Y1T5 Putative uncharacterized protein Sb05g027870 n=1 Tax=Sorghum
           bicolor RepID=C5Y1T5_SORBI
          Length = 440

 Score =  145 bits (365), Expect = 2e-33
 Identities = 81/164 (49%), Positives = 107/164 (65%), Gaps = 6/164 (3%)
 Frame = +3

Query: 21  FIQSALRTMQVTMKSSAVSGQRVGGARVATRSVRR----AQLQVVASSRKQMGRWRSIDA 188
           F+   L   QV+  ++AV+      +  A  +V R    A  +V  + +    RW+ +  
Sbjct: 21  FLGKKLSKQQVSA-AAAVNYYHGKSSSSAAANVNRFKVMAAKEVDETKQSDQDRWKGL-- 77

Query: 189 GVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRA--SFNNIEDGFYI 362
             D SDDQQDITRG+ M+D LFQ   G  GTH AVLSS +Y+SQ +   SF+N+ DGFYI
Sbjct: 78  AYDVSDDQQDITRGKGMIDSLFQAPMG-DGTHVAVLSSYDYISQGQKTYSFDNMMDGFYI 136

Query: 363 SPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           S +F+DK+ +H++KNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 137 SKSFMDKLVVHLSKNFMSLPNIKVPLILGIWGGKGQGKSFQCEL 180

[31][TOP]
>UniRef100_C5J0I3 Chloroplast rubisco activase n=1 Tax=Cucumis sativus
           RepID=C5J0I3_CUCSA
          Length = 611

 Score =  145 bits (365), Expect = 2e-33
 Identities = 78/151 (51%), Positives = 100/151 (66%), Gaps = 7/151 (4%)
 Frame = +3

Query: 63  SSAVSGQRVG-GARVATRSVRRAQLQVVASS----RKQMGRWRSIDAGVDASDDQQDITR 227
           +SA  G R+   +R  T  +     ++VA      + +  +WR +    D SDDQQDITR
Sbjct: 27  NSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGL--AFDTSDDQQDITR 84

Query: 228 GREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRA--SFNNIEDGFYISPAFLDKMTIHIA 401
           G+ + D LFQ   G G THNAVLSS EY+S      S++N  DGFYI+PAF+DK+T+HI 
Sbjct: 85  GKGLADPLFQAPMGTG-THNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIV 143

Query: 402 KNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           KNF+ LP IKVPLILG+WGGKGQGK+FQC L
Sbjct: 144 KNFLTLPNIKVPLILGVWGGKGQGKSFQCEL 174

[32][TOP]
>UniRef100_Q01587 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Cucumis sativus RepID=RCA_CUCSA
          Length = 413

 Score =  145 bits (365), Expect = 2e-33
 Identities = 78/151 (51%), Positives = 100/151 (66%), Gaps = 7/151 (4%)
 Frame = +3

Query: 63  SSAVSGQRVG-GARVATRSVRRAQLQVVASS----RKQMGRWRSIDAGVDASDDQQDITR 227
           +SA  G R+   +R  T  +     ++VA      + +  +WR +    D SDDQQDITR
Sbjct: 27  NSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGL--AFDTSDDQQDITR 84

Query: 228 GREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRA--SFNNIEDGFYISPAFLDKMTIHIA 401
           G+ + D LFQ   G G THNAVLSS EY+S      S++N  DGFYI+PAF+DK+T+HI 
Sbjct: 85  GKGLADPLFQAPMGTG-THNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIV 143

Query: 402 KNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           KNF+ LP IKVPLILG+WGGKGQGK+FQC L
Sbjct: 144 KNFLTLPNIKVPLILGVWGGKGQGKSFQCEL 174

[33][TOP]
>UniRef100_Q308Y6 Ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2
           n=1 Tax=Gossypium hirsutum RepID=Q308Y6_GOSHI
          Length = 421

 Score =  144 bits (364), Expect = 2e-33
 Identities = 73/125 (58%), Positives = 90/125 (72%), Gaps = 2/125 (1%)
 Frame = +3

Query: 126 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 305
           A+ ++   ++ +  RW+ +    D SDDQQDITRG+ MVD LFQ      GTH AV+SS 
Sbjct: 3   AEKEIDEETQTEKDRWKGL--AYDISDDQQDITRGKGMVDSLFQAPMN-DGTHYAVMSSY 59

Query: 306 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKT 479
           EYLSQ   ++N  N  DGFYI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQGK+
Sbjct: 60  EYLSQGLKTYNLDNNMDGFYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKS 119

Query: 480 FQCAL 494
           FQC L
Sbjct: 120 FQCEL 124

[34][TOP]
>UniRef100_C0P5X6 Putative uncharacterized protein n=1 Tax=Zea mays
           RepID=C0P5X6_MAIZE
          Length = 463

 Score =  144 bits (364), Expect = 2e-33
 Identities = 76/132 (57%), Positives = 94/132 (71%), Gaps = 2/132 (1%)
 Frame = +3

Query: 105 ATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTH 284
           AT ++R   + V  +   +  RWR +   +D SDDQQDITRG+  VD LFQ   G  GTH
Sbjct: 45  ATTTIRVRAMAV--NKETEQDRWRGL--ALDTSDDQQDITRGKGRVDPLFQAPMG-DGTH 99

Query: 285 NAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWG 458
            AVLSS +Y+SQ     S +N+ DG+YI+PAF+DK+ +HIAKNFM LP IKVPLILGIWG
Sbjct: 100 VAVLSSYDYISQGLRHYSLDNMMDGYYIAPAFMDKLVVHIAKNFMPLPNIKVPLILGIWG 159

Query: 459 GKGQGKTFQCAL 494
           GKGQGK+FQC L
Sbjct: 160 GKGQGKSFQCEL 171

[35][TOP]
>UniRef100_A9UHW7 Rubisco activase n=1 Tax=Ipomoea batatas RepID=A9UHW7_IPOBA
          Length = 439

 Score =  143 bits (360), Expect = 7e-33
 Identities = 72/125 (57%), Positives = 92/125 (73%), Gaps = 2/125 (1%)
 Frame = +3

Query: 126 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 305
           AQ ++  S +    RW+ +    D SDDQQDITRG+ +VD LFQ   G G TH+AVLSS 
Sbjct: 57  AQPEIDESKQTHEDRWKGLVE--DISDDQQDITRGKGLVDTLFQAPMGTG-THHAVLSSY 113

Query: 306 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKT 479
           EY+SQ + +++  N  DGFYI+PAF+DK+ +HI KNF+ LP IK+PLILGIWGGKGQGK+
Sbjct: 114 EYVSQGQKTYSLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKIPLILGIWGGKGQGKS 173

Query: 480 FQCAL 494
           FQC L
Sbjct: 174 FQCEL 178

[36][TOP]
>UniRef100_A9PG25 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=A9PG25_POPTR
          Length = 361

 Score =  143 bits (360), Expect = 7e-33
 Identities = 71/100 (71%), Positives = 81/100 (81%), Gaps = 2/100 (2%)
 Frame = +3

Query: 201 SDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAF 374
           SDDQQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DGFYI+PAF
Sbjct: 2   SDDQQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGFYIAPAF 60

Query: 375 LDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +DK+ +HI+KNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 61  MDKIVVHISKNFMSLPNIKVPLILGIWGGKGQGKSFQCEL 100

[37][TOP]
>UniRef100_A8W9B0 Chloroplast ribulose 1,5-bisphosphate carboxylase/oxygenase
           activase n=1 Tax=Flaveria bidentis RepID=A8W9B0_FLABI
          Length = 438

 Score =  143 bits (360), Expect = 7e-33
 Identities = 75/148 (50%), Positives = 97/148 (65%), Gaps = 1/148 (0%)
 Frame = +3

Query: 54  TMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGR 233
           ++K    S   V   + +T  +  A+ ++  + +    RWR +    D SDDQQDITRG+
Sbjct: 31  SLKKIVNSRHAVNNNKFSTFKIFAAEKEIEETKQTDKDRWRGL--AYDMSDDQQDITRGK 88

Query: 234 EMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTIHIAKNF 410
            MVD LFQ    +G TH AV+SS EY+S   R   +N  DGFYI+PAF+DK+ +HI KNF
Sbjct: 89  GMVDSLFQAPQDSG-THFAVMSSYEYISTGLRTYLDNNMDGFYIAPAFMDKLVVHITKNF 147

Query: 411 MDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           M LP IKVPLILG+WGGKGQGK+FQC L
Sbjct: 148 MTLPNIKVPLILGVWGGKGQGKSFQCEL 175

[38][TOP]
>UniRef100_A9TBP0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TBP0_PHYPA
          Length = 445

 Score =  142 bits (358), Expect = 1e-32
 Identities = 78/153 (50%), Positives = 104/153 (67%), Gaps = 6/153 (3%)
 Frame = +3

Query: 54  TMKSSAVSGQRVGGARVATRSVRRAQLQVVASS----RKQMGRWRSIDAGVDASDDQQDI 221
           T+ +SA  G +   +   T  V + + +VV  +    +K++ RW  +  G D SDDQQDI
Sbjct: 28  TLPNSAFLGCKSKVSANVTLGVAKGKSRVVCEAEGEKKKKVDRWAGL--GNDISDDQQDI 85

Query: 222 TRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIH 395
            RG+ MVD LFQG  G G T    +SS +Y+S  + ++N  N++DG YI+PAF+DK+ IH
Sbjct: 86  QRGKGMVDALFQGAVGLG-TQVVTMSSWDYVSTGQRTYNFDNMKDGLYIAPAFMDKLIIH 144

Query: 396 IAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           IAKNFM+LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 145 IAKNFMNLPGIKVPLILGIWGGKGQGKSFQCEL 177

[39][TOP]
>UniRef100_B9T427 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplast, putative n=1 Tax=Ricinus communis
           RepID=B9T427_RICCO
          Length = 474

 Score =  141 bits (356), Expect = 2e-32
 Identities = 75/137 (54%), Positives = 94/137 (68%), Gaps = 4/137 (2%)
 Frame = +3

Query: 96  ARVATRSVRRAQLQVVAS--SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFG 269
           +++  + +    L+V A    +KQ  + R      D SDDQQDITRG+ MVD LFQ   G
Sbjct: 42  SKIIHQKILSGNLKVSAEYDEQKQTDKDRWGGLAYDISDDQQDITRGKGMVDSLFQAPMG 101

Query: 270 AGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLI 443
            G TH AV+SS +YLSQ    +N  N  DGFYI+PAF+DK+ +HI KNF++LP IKVPLI
Sbjct: 102 TG-THYAVMSSYDYLSQGLRQYNLDNNMDGFYIAPAFMDKVVVHITKNFLNLPNIKVPLI 160

Query: 444 LGIWGGKGQGKTFQCAL 494
           LGIWGGKGQGK+FQC L
Sbjct: 161 LGIWGGKGQGKSFQCEL 177

[40][TOP]
>UniRef100_B9HT80 Predicted protein (Fragment) n=2 Tax=Populus trichocarpa
           RepID=B9HT80_POPTR
          Length = 424

 Score =  141 bits (355), Expect = 3e-32
 Identities = 72/116 (62%), Positives = 86/116 (74%), Gaps = 2/116 (1%)
 Frame = +3

Query: 153 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS 332
           +KQ  + R      D SDDQQDI+RG+ MVD LFQ   G G THN VL+S EYLSQ   +
Sbjct: 14  KKQTDKDRWGGLVTDMSDDQQDISRGKGMVDSLFQAPQGTG-THNPVLNSYEYLSQGLRT 72

Query: 333 FN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +N  N  DGFYI+PAF+DK+ +HI+KNFM LP IKVPLILG+WGGKGQGK+FQC L
Sbjct: 73  YNLDNNMDGFYIAPAFMDKLVVHISKNFMSLPNIKVPLILGVWGGKGQGKSFQCEL 128

[41][TOP]
>UniRef100_Q9ZT00 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=3 Tax=Zea mays RepID=RCA_MAIZE
          Length = 433

 Score =  141 bits (355), Expect = 3e-32
 Identities = 71/125 (56%), Positives = 91/125 (72%), Gaps = 2/125 (1%)
 Frame = +3

Query: 126 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 305
           A  +V  + +    RW+ +    D SDDQQDITRG+ +VD+LFQ   G  GTH AVLSS 
Sbjct: 52  AAKEVDETKQTDEDRWKGL--AYDISDDQQDITRGKGLVDNLFQAPMG-DGTHVAVLSSY 108

Query: 306 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKT 479
           +Y+SQ + S+N  N+ DGFYI+  F+DK+ +H++KNFM LP IKVPLILGIWGGKGQGK+
Sbjct: 109 DYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKS 168

Query: 480 FQCAL 494
           FQC L
Sbjct: 169 FQCEL 173

[42][TOP]
>UniRef100_C6T859 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6T859_SOYBN
          Length = 443

 Score =  140 bits (354), Expect = 3e-32
 Identities = 82/157 (52%), Positives = 100/157 (63%), Gaps = 13/157 (8%)
 Frame = +3

Query: 63  SSAVSG---QRVGGARVATRSVRRAQLQVVASSRKQ---------MGRWRSIDAGVDASD 206
           SSA  G   ++V  +RV    V     ++VA   K+           RW+ +    D SD
Sbjct: 29  SSAFFGTSLKKVIASRVPNSKVSGGSFKIVAVEEKKEIEETQQTDKDRWKGL--AYDISD 86

Query: 207 DQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDK 383
           DQQDITRG+ +VD LFQ    AG TH AV+SS EYLS   R   +N  DGFYI+PAF+DK
Sbjct: 87  DQQDITRGKGLVDSLFQAPQDAG-THYAVMSSYEYLSTGLRQYLDNKMDGFYIAPAFMDK 145

Query: 384 MTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           + +HI+KNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 146 LVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 182

[43][TOP]
>UniRef100_B7EAB2 cDNA clone:J013001C24, full insert sequence n=2 Tax=Oryza sativa
           Japonica Group RepID=B7EAB2_ORYSJ
          Length = 433

 Score =  140 bits (354), Expect = 3e-32
 Identities = 72/111 (64%), Positives = 83/111 (74%), Gaps = 2/111 (1%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 341
           RW+ +    D SDDQQDITRG+  VD LFQ   G  GTH AVLSS EYLSQ   +  F+N
Sbjct: 61  RWKGL--AYDISDDQQDITRGKGFVDSLFQAPTG-DGTHEAVLSSYEYLSQGLRTYDFDN 117

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
              GFYI+PAF+DK+ +HI+KNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 118 TMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 168

[44][TOP]
>UniRef100_P93431 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=2 Tax=Oryza sativa RepID=RCA_ORYSJ
          Length = 466

 Score =  140 bits (354), Expect = 3e-32
 Identities = 72/111 (64%), Positives = 83/111 (74%), Gaps = 2/111 (1%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 341
           RW+ +    D SDDQQDITRG+  VD LFQ   G  GTH AVLSS EYLSQ   +  F+N
Sbjct: 61  RWKGL--AYDISDDQQDITRGKGFVDSLFQAPTG-DGTHEAVLSSYEYLSQGLRTYDFDN 117

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
              GFYI+PAF+DK+ +HI+KNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 118 TMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 168

[45][TOP]
>UniRef100_A7NYV5 Chromosome chr6 scaffold_3, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7NYV5_VITVI
          Length = 472

 Score =  140 bits (353), Expect = 4e-32
 Identities = 71/122 (58%), Positives = 87/122 (71%), Gaps = 2/122 (1%)
 Frame = +3

Query: 135 QVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYL 314
           ++  + + +  RW+ +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS EYL
Sbjct: 59  EIDENEQTEKDRWKGL--AYDVSDDQQDITRGKGMVDSLFQAPMQSG-THYAVMSSYEYL 115

Query: 315 SQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQC 488
           S     +N  N  DGFYI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQGK+FQC
Sbjct: 116 STGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQC 175

Query: 489 AL 494
            L
Sbjct: 176 EL 177

[46][TOP]
>UniRef100_A5C3D4 Putative uncharacterized protein n=1 Tax=Vitis vinifera
           RepID=A5C3D4_VITVI
          Length = 472

 Score =  140 bits (353), Expect = 4e-32
 Identities = 71/122 (58%), Positives = 87/122 (71%), Gaps = 2/122 (1%)
 Frame = +3

Query: 135 QVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYL 314
           ++  + + +  RW+ +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS EYL
Sbjct: 59  EIDENEQTEKDRWKGL--AYDVSDDQQDITRGKGMVDSLFQAPMQSG-THYAVMSSYEYL 115

Query: 315 SQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQC 488
           S     +N  N  DGFYI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQGK+FQC
Sbjct: 116 STGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQC 175

Query: 489 AL 494
            L
Sbjct: 176 EL 177

[47][TOP]
>UniRef100_Q06B50 Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase large protein isoform n=2 Tax=Acer rubrum
           RepID=Q06B50_ACERU
          Length = 474

 Score =  140 bits (352), Expect = 6e-32
 Identities = 77/154 (50%), Positives = 98/154 (63%), Gaps = 7/154 (4%)
 Frame = +3

Query: 54  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVA----SSRKQMGRWRSIDAGVDASDDQQ 215
           T+ +SA  G  +    +R     V     +VVA    + + +  +WR +    D SDDQQ
Sbjct: 27  TVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGL--AYDTSDDQQ 84

Query: 216 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTI 392
           DITRG+ +VD LFQ   G G TH AV+SS +Y+S   R    N  DGFYI+PAF+DK+ +
Sbjct: 85  DITRGKGLVDSLFQAPSGTG-THYAVMSSYDYISTGLRTYLENSMDGFYIAPAFMDKLVV 143

Query: 393 HIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           HI KNFM LP IK+PLILGIWGGKGQGK+FQC L
Sbjct: 144 HITKNFMSLPNIKIPLILGIWGGKGQGKSFQCEL 177

[48][TOP]
>UniRef100_Q7X9A2 Rubisco activase alpha form n=1 Tax=Deschampsia antarctica
           RepID=Q7X9A2_DESAN
          Length = 465

 Score =  139 bits (350), Expect = 1e-31
 Identities = 68/111 (61%), Positives = 84/111 (75%), Gaps = 2/111 (1%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--RASFNN 341
           +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +  F+N
Sbjct: 61  KWKGL--AYDISDDQQDITRGKGIVDSLFQAPMG-DGTHEAVLSSYEYVSQGLKKYDFDN 117

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
              GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQGK+FQC L
Sbjct: 118 TMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 168

[49][TOP]
>UniRef100_Q7X9A1 Rubisco activase beta form n=1 Tax=Deschampsia antarctica
           RepID=Q7X9A1_DESAN
          Length = 428

 Score =  139 bits (350), Expect = 1e-31
 Identities = 68/111 (61%), Positives = 84/111 (75%), Gaps = 2/111 (1%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--RASFNN 341
           +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +  F+N
Sbjct: 61  KWKGL--AYDISDDQQDITRGKGIVDSLFQAPMG-DGTHEAVLSSYEYVSQGLKKYDFDN 117

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
              GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQGK+FQC L
Sbjct: 118 TMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 168

[50][TOP]
>UniRef100_Q05C31 Putative uncharacterized protein n=1 Tax=Homo sapiens
           RepID=Q05C31_HUMAN
          Length = 427

 Score =  139 bits (350), Expect = 1e-31
 Identities = 68/116 (58%), Positives = 86/116 (74%), Gaps = 2/116 (1%)
 Frame = +3

Query: 153 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 326
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +
Sbjct: 55  KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLKK 111

Query: 327 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
             F+N   GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQGK+FQC L
Sbjct: 112 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 167

[51][TOP]
>UniRef100_Q40281 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Malus x domestica RepID=RCA_MALDO
          Length = 437

 Score =  139 bits (350), Expect = 1e-31
 Identities = 73/139 (52%), Positives = 94/139 (67%), Gaps = 6/139 (4%)
 Frame = +3

Query: 96  ARVATRSVRRAQLQVVAS----SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGG 263
           +R     V    L++VAS     +    RW+ +    D SDDQQDITRG+  VD LFQ  
Sbjct: 42  SRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGL--AFDTSDDQQDITRGKGKVDSLFQAP 99

Query: 264 FGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVP 437
            G+G TH A++SS EY+S    + +F+N  DG+YI+PAF+DK+ +HI KNFM LP +KVP
Sbjct: 100 QGSG-THFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVP 158

Query: 438 LILGIWGGKGQGKTFQCAL 494
           LILGIWGGKGQGK+FQC L
Sbjct: 159 LILGIWGGKGQGKSFQCEL 177

[52][TOP]
>UniRef100_Q9AXG1 Ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 n=1
           Tax=Gossypium hirsutum RepID=Q9AXG1_GOSHI
          Length = 438

 Score =  139 bits (349), Expect = 1e-31
 Identities = 70/125 (56%), Positives = 88/125 (70%), Gaps = 2/125 (1%)
 Frame = +3

Query: 126 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 305
           A  ++   ++    RW+ +    D SDDQQDITRG+ MVD LFQ      GTH AV+SS 
Sbjct: 59  AAKEIDEDTQTDQDRWKGL--AYDISDDQQDITRGKGMVDSLFQAPMN-DGTHYAVMSSY 115

Query: 306 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKT 479
           EY+SQ   +++  N  DGFYI+PAF+DK+ +HI KN+M LP IKVPLILGIWGGKGQGK+
Sbjct: 116 EYISQGLRTYDLDNNMDGFYIAPAFMDKLVVHITKNYMTLPNIKVPLILGIWGGKGQGKS 175

Query: 480 FQCAL 494
           FQC L
Sbjct: 176 FQCEL 180

[53][TOP]
>UniRef100_A9TBN9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TBN9_PHYPA
          Length = 455

 Score =  139 bits (349), Expect = 1e-31
 Identities = 78/160 (48%), Positives = 105/160 (65%), Gaps = 5/160 (3%)
 Frame = +3

Query: 30  SALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASS---RKQMGRWRSIDAGVDA 200
           SA  T + T+ SSA+ G     +   T  V + + +VV  +   +K++ RW  +  G D 
Sbjct: 21  SAQATSKSTLPSSALFGCSSKVSVNVTLGVAKGKSRVVCEAEGEKKKVDRWAGL--GNDI 78

Query: 201 SDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAF 374
           SDDQQDI RG+ MVD LFQG  G G T    +SS +Y+S ++ ++N  N  DG YI+PAF
Sbjct: 79  SDDQQDIQRGKGMVDALFQGATGLG-TQVVTMSSWDYVSTAQRTYNFDNTSDGLYIAPAF 137

Query: 375 LDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +DK+ IH+ KNFM+LP IKVPLILG+WGGKGQGK+FQ  L
Sbjct: 138 MDKLVIHVCKNFMNLPGIKVPLILGVWGGKGQGKSFQSEL 177

[54][TOP]
>UniRef100_Q40073 Ribulose bisphosphate carboxylase/oxygenase activase A,
           chloroplastic n=2 Tax=Hordeum vulgare RepID=RCAA_HORVU
          Length = 464

 Score =  139 bits (349), Expect = 1e-31
 Identities = 68/116 (58%), Positives = 86/116 (74%), Gaps = 2/116 (1%)
 Frame = +3

Query: 153 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 326
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G G TH AVLSS EY+SQ   +
Sbjct: 55  KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTGHG-THEAVLSSYEYVSQGLRK 111

Query: 327 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
             F+N   GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIWGGKGQGK+FQC L
Sbjct: 112 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 167

[55][TOP]
>UniRef100_O82428 Rubisco activase n=1 Tax=Datisca glomerata RepID=O82428_DATGL
          Length = 373

 Score =  138 bits (347), Expect = 2e-31
 Identities = 75/136 (55%), Positives = 89/136 (65%), Gaps = 3/136 (2%)
 Frame = +3

Query: 96  ARVATRSVRRAQLQVVASS--RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFG 269
           +R+    +    ++ VA     KQ  + R      D SDDQQDITRG+ MVD LFQ    
Sbjct: 43  SRLTNPRIAAGNIKAVADDDEEKQTSKDRWGGLAFDTSDDQQDITRGKGMVDSLFQAPMQ 102

Query: 270 AGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLIL 446
            G TH AV+SS EYLS   R   +N  DGFYI+PAF+DK+ +HI KNFM LP IKVPLIL
Sbjct: 103 TG-THYAVMSSYEYLSTGLRQYLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLIL 161

Query: 447 GIWGGKGQGKTFQCAL 494
           GIWGGKGQGK+FQC L
Sbjct: 162 GIWGGKGQGKSFQCEL 177

[56][TOP]
>UniRef100_C1K241 Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase n=1 Tax=Solenostemon scutellarioides
           RepID=C1K241_SOLSC
          Length = 436

 Score =  138 bits (347), Expect = 2e-31
 Identities = 69/131 (52%), Positives = 94/131 (71%), Gaps = 5/131 (3%)
 Frame = +3

Query: 117 VRRAQLQVVASSRKQM--GRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNA 290
           V     +VVA ++K     RW  +    D SDDQQDI RG+ MVD LFQ   G G TH+A
Sbjct: 48  VSSGSFKVVAEAKKPSPGDRWGGLIE--DVSDDQQDIVRGKGMVDSLFQAPSGMG-THDA 104

Query: 291 VLSSQEYLSQSRASFNNIE---DGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGG 461
           +++S EY+SQ + ++++++   DG YI+PAF+DK+ +H++KNFM LP IKVPLILG+WGG
Sbjct: 105 IMNSYEYISQGQKTYDHLDNTLDGLYIAPAFMDKLVVHLSKNFMTLPNIKVPLILGVWGG 164

Query: 462 KGQGKTFQCAL 494
           KGQGK+FQC L
Sbjct: 165 KGQGKSFQCEL 175

[57][TOP]
>UniRef100_A7PIQ8 Chromosome chr13 scaffold_17, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7PIQ8_VITVI
          Length = 438

 Score =  138 bits (347), Expect = 2e-31
 Identities = 79/155 (50%), Positives = 96/155 (61%), Gaps = 8/155 (5%)
 Frame = +3

Query: 54  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVASSRKQM----GRWRSIDAGVDASDDQQ 215
           ++ SSA  G  +    +R     V     +VVA     M     +W+ +    D SDDQQ
Sbjct: 27  SVPSSAFLGSSLKKVNSRFTHSKVSSGSFKVVAEVDDDMQTEKDKWKGL--AFDTSDDQQ 84

Query: 216 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMT 389
           DI RG+ MVD LFQ    AG TH AV+SS EY+S     +N  N  DGFYI+PAF+DK+ 
Sbjct: 85  DIVRGKGMVDSLFQAPMDAG-THYAVMSSYEYISTGLRQYNLDNNMDGFYIAPAFMDKLV 143

Query: 390 IHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +HI KNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 144 VHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 178

[58][TOP]
>UniRef100_B9SDY7 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplast, putative n=1 Tax=Ricinus communis
           RepID=B9SDY7_RICCO
          Length = 473

 Score =  137 bits (346), Expect = 3e-31
 Identities = 71/111 (63%), Positives = 81/111 (72%), Gaps = 2/111 (1%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 341
           RW  +    D SDDQQDITRG+ MVD LFQ    AG TH AV+SS EYLS     +N  N
Sbjct: 69  RWGGL--AYDMSDDQQDITRGKGMVDSLFQAPQDAG-THYAVMSSYEYLSTGLRQYNLDN 125

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
             DGFYI+PAF+DK+ +HI KNFM LP IK+PLILGIWGGKGQGK+FQC L
Sbjct: 126 NMDGFYIAPAFMDKLVVHITKNFMTLPNIKIPLILGIWGGKGQGKSFQCEL 176

[59][TOP]
>UniRef100_A9TLG8 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TLG8_PHYPA
          Length = 410

 Score =  137 bits (346), Expect = 3e-31
 Identities = 69/115 (60%), Positives = 87/115 (75%), Gaps = 2/115 (1%)
 Frame = +3

Query: 156 KQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASF 335
           K++ RW  +  G D SDDQQDI RG+ MVD LFQG  G G T    +SS +Y+S  + ++
Sbjct: 31  KKVDRWAGL--GNDISDDQQDIQRGKGMVDALFQGAVGLG-TQVVTMSSWDYVSTGQRTY 87

Query: 336 N--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           N  N++DG YI+PAF+DK+ IHIAKNFM+LP IKVPLILG+WGGKGQGK+FQC L
Sbjct: 88  NFDNMKDGLYIAPAFMDKLIIHIAKNFMNLPGIKVPLILGVWGGKGQGKSFQCEL 142

[60][TOP]
>UniRef100_A7PNR4 Chromosome chr8 scaffold_23, whole genome shotgun sequence n=2
           Tax=Vitis vinifera RepID=A7PNR4_VITVI
          Length = 474

 Score =  137 bits (346), Expect = 3e-31
 Identities = 77/153 (50%), Positives = 97/153 (63%), Gaps = 6/153 (3%)
 Frame = +3

Query: 54  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVAS--SRKQMGRWRSIDAGVDASDDQQDI 221
           ++ SSA  G  +    +++A         +VVA     KQ  + +      D SDDQQDI
Sbjct: 26  SVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEVDEEKQTSKDKWKGLAFDESDDQQDI 85

Query: 222 TRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIH 395
           TRG+ MVD LFQ    +G TH AV+SS +Y+S     +N  N  DGFYI+PAF+DK+ +H
Sbjct: 86  TRGKGMVDSLFQAPMDSG-THYAVMSSYDYISTGLRQYNLDNTMDGFYIAPAFMDKLVVH 144

Query: 396 IAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           I KNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 145 ITKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 177

[61][TOP]
>UniRef100_C6YBD7 Chloroplast ribulose-1,5-bisphosphate carboxylase activase
           (Fragment) n=1 Tax=Triticum aestivum RepID=C6YBD7_WHEAT
          Length = 360

 Score =  137 bits (344), Expect = 5e-31
 Identities = 67/116 (57%), Positives = 85/116 (73%), Gaps = 2/116 (1%)
 Frame = +3

Query: 153 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 326
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +
Sbjct: 24  KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLKK 80

Query: 327 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
             F+N   GFYI+PAF+DK+ +H++KNFM LP IK+P ILGIWGGKGQGK+FQC L
Sbjct: 81  YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPRILGIWGGKGQGKSFQCEL 136

[62][TOP]
>UniRef100_Q7X999 Ribulose bisphosphate carboxylase/oxygenase activase 2,
           chloroplastic n=1 Tax=Larrea tridentata RepID=RCA2_LARTR
          Length = 435

 Score =  137 bits (344), Expect = 5e-31
 Identities = 67/111 (60%), Positives = 83/111 (74%), Gaps = 2/111 (1%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 341
           +W+ +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS +Y+SQ    +N  N
Sbjct: 70  KWKGL--AYDISDDQQDITRGKGMVDTLFQAPMQSG-THYAVMSSYDYISQGLRQYNLDN 126

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
             DGFYI+PAF+DK+ +HI KNF+ LP IK+PLILGIWGGKGQGK+FQC L
Sbjct: 127 NMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCEL 177

[63][TOP]
>UniRef100_Q7X9A0 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic n=1 Tax=Larrea tridentata RepID=RCA1_LARTR
          Length = 476

 Score =  137 bits (344), Expect = 5e-31
 Identities = 67/111 (60%), Positives = 83/111 (74%), Gaps = 2/111 (1%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 341
           +W+ +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS +Y+SQ    +N  N
Sbjct: 70  KWKGL--AYDISDDQQDITRGKGMVDTLFQAPMQSG-THYAVMSSYDYISQGLRQYNLDN 126

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
             DGFYI+PAF+DK+ +HI KNF+ LP IK+PLILGIWGGKGQGK+FQC L
Sbjct: 127 NMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIWGGKGQGKSFQCEL 177

[64][TOP]
>UniRef100_Q06B48 Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase large protein isoform n=2 Tax=Acer rubrum
           RepID=Q06B48_ACERU
          Length = 474

 Score =  135 bits (341), Expect = 1e-30
 Identities = 75/154 (48%), Positives = 96/154 (62%), Gaps = 7/154 (4%)
 Frame = +3

Query: 54  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVA----SSRKQMGRWRSIDAGVDASDDQQ 215
           T+ +SA  G  +    +R     V     +VVA    + + +  +WR +    D SDDQQ
Sbjct: 27  TVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGL--AYDTSDDQQ 84

Query: 216 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTI 392
           DITRG+ +VD LFQ   G G TH AV+SS +Y+S   R    N  DGFYI+P F+ K+ +
Sbjct: 85  DITRGKGLVDSLFQAPSGTG-THYAVMSSYDYISTGLRTYLENSMDGFYIAPVFMGKLVV 143

Query: 393 HIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           HI KNFM LP IK+PLILGIWGGKGQGK+FQC L
Sbjct: 144 HITKNFMSLPNIKIPLILGIWGGKGQGKSFQCEL 177

[65][TOP]
>UniRef100_O49074 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Solanum pennellii RepID=RCA_SOLPN
          Length = 459

 Score =  135 bits (341), Expect = 1e-30
 Identities = 71/142 (50%), Positives = 98/142 (69%), Gaps = 4/142 (2%)
 Frame = +3

Query: 81  QRVGGARVATRSVRRAQLQVVASS--RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLF 254
           ++V    V++  V    L+VVA      +  RW+ +    + SDDQQDI RG+ +VD LF
Sbjct: 38  KKVYAKGVSSPKVSNRNLRVVAQEVDETKEDRWKGLYD--NTSDDQQDIARGKGLVDSLF 95

Query: 255 QGGFGAGGTHNAVLSSQEYLSQSRASF--NNIEDGFYISPAFLDKMTIHIAKNFMDLPKI 428
           Q   G G TH+A+++S EY+SQ+  ++  +N  DGFYI+PAF+DK+ +HI KNF+ LP I
Sbjct: 96  QAPTGTG-THHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNI 154

Query: 429 KVPLILGIWGGKGQGKTFQCAL 494
           KVPLILG+WGGKGQGK+FQC L
Sbjct: 155 KVPLILGVWGGKGQGKSFQCEL 176

[66][TOP]
>UniRef100_Q9M431 Rubisco activase (Fragment) n=1 Tax=Pinus halepensis
           RepID=Q9M431_PINHA
          Length = 226

 Score =  134 bits (338), Expect = 2e-30
 Identities = 64/99 (64%), Positives = 80/99 (80%), Gaps = 2/99 (2%)
 Frame = +3

Query: 204 DDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLS--QSRASFNNIEDGFYISPAFL 377
           DDQQDI RG+  VD LFQ   G+G THNA++SS +Y+S  Q   S +N+ DG+YI+PAF+
Sbjct: 1   DDQQDIRRGKGKVDSLFQAPMGSG-THNAIMSSYDYISTAQRTYSLDNMMDGYYIAPAFM 59

Query: 378 DKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           DK+ +HI+KNFM+LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 60  DKLVVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCEL 98

[67][TOP]
>UniRef100_A9NZT0 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=A9NZT0_PICSI
          Length = 363

 Score =  133 bits (335), Expect = 5e-30
 Identities = 63/111 (56%), Positives = 85/111 (76%), Gaps = 2/111 (1%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 341
           +W+ +    D SDDQ DI RG+  VD LFQ   G+G THN V+S+ +Y+S ++ +  F+N
Sbjct: 73  KWKGL--AFDESDDQMDIRRGKGKVDSLFQAPMGSG-THNVVMSTYDYISTAQRTYDFDN 129

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
             DG+YI+P+F+DK+ +HI+KNFM+LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 130 TMDGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCEL 180

[68][TOP]
>UniRef100_A9NV87 Putative uncharacterized protein n=2 Tax=Picea sitchensis
           RepID=A9NV87_PICSI
          Length = 480

 Score =  133 bits (335), Expect = 5e-30
 Identities = 63/111 (56%), Positives = 85/111 (76%), Gaps = 2/111 (1%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 341
           +W+ +    D SDDQ DI RG+  VD LFQ   G+G THN V+S+ +Y+S ++ +  F+N
Sbjct: 73  KWKGL--AFDESDDQMDIRRGKGKVDSLFQAPMGSG-THNVVMSTYDYISTAQRTYDFDN 129

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
             DG+YI+P+F+DK+ +HI+KNFM+LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 130 TMDGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCEL 180

[69][TOP]
>UniRef100_Q8L5T3 Rubisco activase n=1 Tax=Chenopodium quinoa RepID=Q8L5T3_CHEQI
          Length = 438

 Score =  124 bits (312), Expect = 3e-27
 Identities = 67/135 (49%), Positives = 88/135 (65%), Gaps = 2/135 (1%)
 Frame = +3

Query: 96  ARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAG 275
           +R ++ +V+ A  +   S +    RW  +    D SDDQ DI RG+ MVD LFQ    +G
Sbjct: 49  SRASSMTVKAADYE--ESKQSNTDRWAHL--ATDISDDQLDIRRGKGMVDSLFQAPMDSG 104

Query: 276 GTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILG 449
            TH  V SS EY SQ    +N  N+   FYI+P+F+DK+ +HI KN+++LP IKVPLILG
Sbjct: 105 -THVPVQSSLEYESQGLRKYNIDNMLGNFYIAPSFMDKIVVHITKNYLNLPNIKVPLILG 163

Query: 450 IWGGKGQGKTFQCAL 494
           IWGGKGQGK+FQC L
Sbjct: 164 IWGGKGQGKSFQCEL 178

[70][TOP]
>UniRef100_C0PQ99 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=C0PQ99_PICSI
          Length = 368

 Score =  122 bits (306), Expect = 1e-26
 Identities = 57/95 (60%), Positives = 76/95 (80%), Gaps = 2/95 (2%)
 Frame = +3

Query: 216 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNNIEDGFYISPAFLDKMT 389
           DI RG+  VD LFQ   G+G THN V+S+ +Y+S ++ +  F+N  DG+YI+P+F+DK+ 
Sbjct: 2   DIRRGKGKVDSLFQAPMGSG-THNVVMSTYDYISTAQRTYDFDNTMDGYYIAPSFMDKLL 60

Query: 390 IHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +HI+KNFM+LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 61  VHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCEL 95

[71][TOP]
>UniRef100_P10871 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=2 Tax=Spinacia oleracea RepID=RCA_SPIOL
          Length = 472

 Score =  121 bits (304), Expect = 2e-26
 Identities = 64/129 (49%), Positives = 83/129 (64%), Gaps = 2/129 (1%)
 Frame = +3

Query: 114 SVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAV 293
           S R   + V A+  ++    +      D SDDQ DI RG+ MVD LFQ    AG TH  +
Sbjct: 48  SSRTTSMTVKAAENEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAG-THVPI 106

Query: 294 LSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKG 467
            SS EY SQ    ++  N+   FYI+PAF+DK+ +HI KNF++LP IK+PLILG+WGGKG
Sbjct: 107 QSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKG 166

Query: 468 QGKTFQCAL 494
           QGK+FQC L
Sbjct: 167 QGKSFQCEL 175

[72][TOP]
>UniRef100_B9IFW9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IFW9_POPTR
          Length = 476

 Score =  108 bits (269), Expect = 2e-22
 Identities = 61/143 (42%), Positives = 85/143 (59%), Gaps = 2/143 (1%)
 Frame = +3

Query: 72  VSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDL 251
           V G ++   R+ TR+++ A  +     +    +W+ +    D SDDQQDITRG+ MVD L
Sbjct: 40  VLGSKITNQRLLTRNLKLAA-EYDKEKQPSKDKWKGL--AFDTSDDQQDITRGKGMVDSL 96

Query: 252 FQGGFGAGGTHNAVLSSQEYLSQSRASF--NNIEDGFYISPAFLDKMTIHIAKNFMDLPK 425
           FQ   G G TH AV+SS +Y S+    +  +N  DGFYI+ +F+DK+ +HI KNF+ LP 
Sbjct: 97  FQAPMGTG-THYAVMSSYDYTSKGLRQYKLDNNMDGFYIASSFMDKLVVHITKNFLQLPN 155

Query: 426 IKVPLILGIWGGKGQGKTFQCAL 494
           IK          KGQGK+FQC L
Sbjct: 156 IK--------ASKGQGKSFQCEL 170

[73][TOP]
>UniRef100_Q9ATC1 Rubisco activase (Fragment) n=1 Tax=Zantedeschia aethiopica
           RepID=Q9ATC1_ZANAE
          Length = 334

 Score =  107 bits (268), Expect = 3e-22
 Identities = 50/74 (67%), Positives = 59/74 (79%), Gaps = 2/74 (2%)
 Frame = +3

Query: 279 THNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGI 452
           THN VLSS EY+S    SFN  N  +G YI+PAF+DK+ +HI KNFM+LP IK+PLILGI
Sbjct: 1   THNPVLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLPNIKIPLILGI 60

Query: 453 WGGKGQGKTFQCAL 494
           WGGKGQGK+FQC L
Sbjct: 61  WGGKGQGKSFQCEL 74

[74][TOP]
>UniRef100_A6H5A0 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H5A0_VIGUN
          Length = 236

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 40/55 (72%), Positives = 50/55 (90%)
 Frame = +3

Query: 330 SFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +F+N++DG+YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 11  NFDNMKDGYYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 65

[75][TOP]
>UniRef100_A6H599 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H599_VIGUN
          Length = 214

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 40/55 (72%), Positives = 50/55 (90%)
 Frame = +3

Query: 330 SFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +F+N++DG+YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 22  NFDNMKDGYYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 76

[76][TOP]
>UniRef100_A6H596 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H596_VIGUN
          Length = 251

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 40/55 (72%), Positives = 50/55 (90%)
 Frame = +3

Query: 330 SFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +F+N++DG+YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 11  NFDNMKDGYYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 65

[77][TOP]
>UniRef100_A6H5A1 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H5A1_VIGUN
          Length = 194

 Score = 90.9 bits (224), Expect = 4e-17
 Identities = 38/51 (74%), Positives = 46/51 (90%)
 Frame = +3

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           ++DG+YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 1   MKDGYYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 51

[78][TOP]
>UniRef100_A6H598 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H598_VIGUN
          Length = 244

 Score = 90.9 bits (224), Expect = 4e-17
 Identities = 38/51 (74%), Positives = 46/51 (90%)
 Frame = +3

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           ++DG+YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 1   MKDGYYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 51

[79][TOP]
>UniRef100_A6H597 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H597_VIGUN
          Length = 229

 Score = 90.9 bits (224), Expect = 4e-17
 Identities = 38/51 (74%), Positives = 46/51 (90%)
 Frame = +3

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           ++DG+YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 1   MKDGYYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 51

[80][TOP]
>UniRef100_A9NXN4 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=A9NXN4_PICSI
          Length = 310

 Score = 89.7 bits (221), Expect = 9e-17
 Identities = 37/49 (75%), Positives = 46/49 (93%)
 Frame = +3

Query: 348 DGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           DG+YI+P+F+DK+ +HI+KNFM+LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 2   DGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIWGGKGQGKSFQCEL 50

[81][TOP]
>UniRef100_Q9SX18 Rubisco activase (Fragment) n=1 Tax=Datisca glomerata
           RepID=Q9SX18_DATGL
          Length = 244

 Score = 87.4 bits (215), Expect = 4e-16
 Identities = 37/48 (77%), Positives = 42/48 (87%)
 Frame = +3

Query: 351 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           GFYI+PAF+DK+ +HI KNFM  P IKVPLILGIWGGKGQGK+FQC L
Sbjct: 1   GFYIAPAFMDKLVVHITKNFMTFPNIKVPLILGIWGGKGQGKSFQCEL 48

[82][TOP]
>UniRef100_Q9FUI0 Ribulose 1,5-bisphosphate carboxylase/oxygenase activase (Fragment)
           n=1 Tax=Zea mays RepID=Q9FUI0_MAIZE
          Length = 308

 Score = 84.0 bits (206), Expect = 5e-15
 Identities = 35/48 (72%), Positives = 42/48 (87%)
 Frame = +3

Query: 351 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           GFYI+  F+DK+ +H++KNFM LP IKVPLILGIWGGKGQGK+FQC L
Sbjct: 1   GFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCEL 48

[83][TOP]
>UniRef100_Q45YI8 Rubisco activase 2 n=1 Tax=Mesembryanthemum crystallinum
           RepID=Q45YI8_MESCR
          Length = 456

 Score = 83.2 bits (204), Expect = 8e-15
 Identities = 49/102 (48%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
 Frame = +3

Query: 198 ASDDQQDITRGRE--MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPA 371
           A  D  +IT G    ++DDLF G F  G   + V    +Y  +   SF  +   +YI+P 
Sbjct: 110 AEADNTNITVGARPGVIDDLFTGNF-LGRDSDIVF---DYRQKVTRSFEYLRGDYYIAPV 165

Query: 372 FLDKMTIHIAKNFM-DLPKIKVPLILGIWGGKGQGKTFQCAL 494
           FLD++  HI KNFM  L  +KVPLILGIWGGKGQGKTFQ  L
Sbjct: 166 FLDQVVCHIVKNFMAHLLNVKVPLILGIWGGKGQGKTFQTEL 207

[84][TOP]
>UniRef100_C5Y9J8 Putative uncharacterized protein Sb06g031390 n=1 Tax=Sorghum
           bicolor RepID=C5Y9J8_SORBI
          Length = 433

 Score = 83.2 bits (204), Expect = 8e-15
 Identities = 51/119 (42%), Positives = 68/119 (57%), Gaps = 11/119 (9%)
 Frame = +3

Query: 171 WRSIDAGVD-------ASDDQQDITRGRE--MVDDLFQGGFGAGGTHNAVLSSQEYLSQS 323
           W S DA  D          D  ++T G    +VDDLF G F  G   + V    +Y  ++
Sbjct: 71  WESKDAEGDDYLYRLGKEADNLNVTVGARAGIVDDLFVGNF-LGKDSDIVF---DYRQKA 126

Query: 324 RASFNNIEDGFYISPAFLDKMTIHIAKNFMD--LPKIKVPLILGIWGGKGQGKTFQCAL 494
             +F  ++  +YI+PAFLDK+  HI KN++   L  IK+PLILG+WGGKGQGKTFQ  L
Sbjct: 127 TRTFEYLQGDYYIAPAFLDKVACHIVKNYIGHLLNNIKIPLILGVWGGKGQGKTFQTEL 185

[85][TOP]
>UniRef100_Q9AST9 At1g73110/F3N23_39 n=1 Tax=Arabidopsis thaliana RepID=Q9AST9_ARATH
          Length = 432

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 46/102 (45%), Positives = 64/102 (62%), Gaps = 3/102 (2%)
 Frame = +3

Query: 198 ASDDQQDITRGRE--MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPA 371
           A  D  +I  G    M+DD+F G F  G   + V    +Y  ++  SF +++  +YI+P+
Sbjct: 86  AESDNVNIAVGARSGMIDDVFIGDF-LGKDSDIVF---DYRQKATRSFEHLQGDYYIAPS 141

Query: 372 FLDKMTIHIAKNFMDLP-KIKVPLILGIWGGKGQGKTFQCAL 494
           FLDK+ +HI KN++     IK+PLILGIWGGKGQGKTFQ  L
Sbjct: 142 FLDKVAVHIVKNYLAPSLNIKIPLILGIWGGKGQGKTFQTEL 183

[86][TOP]
>UniRef100_B5W427 Ribulose bisphosphate carboxylase small chain n=1 Tax=Arthrospira
           maxima CS-328 RepID=B5W427_SPIMA
          Length = 434

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 34/47 (72%), Positives = 42/47 (89%)
 Frame = +3

Query: 354 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +YISP FLDK+++HI KNF+D+P+IKVPLILGI G KG+GKTFQC L
Sbjct: 3   YYISPRFLDKVSVHITKNFLDIPRIKVPLILGIHGRKGEGKTFQCEL 49

[87][TOP]
>UniRef100_Q7XN85 Os04g0658300 protein n=1 Tax=Oryza sativa Japonica Group
           RepID=Q7XN85_ORYSJ
          Length = 441

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = +3

Query: 237 MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM- 413
           +VDDLF G F  G   + V    +Y  ++  +F  ++  +YI+P FLDK+  HI KN++ 
Sbjct: 110 IVDDLFVGNF-LGKDSDIVF---DYRQKATRTFEYLQGDYYIAPLFLDKVACHIVKNYLA 165

Query: 414 DLPKIKVPLILGIWGGKGQGKTFQCAL 494
            +  IK+PLILGIWGGKGQGKTFQ  L
Sbjct: 166 HILTIKIPLILGIWGGKGQGKTFQTEL 192

[88][TOP]
>UniRef100_Q01HZ5 OSIGBa0132E09-OSIGBa0108L24.4 protein n=1 Tax=Oryza sativa
           RepID=Q01HZ5_ORYSA
          Length = 441

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = +3

Query: 237 MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM- 413
           +VDDLF G F  G   + V    +Y  ++  +F  ++  +YI+P FLDK+  HI KN++ 
Sbjct: 110 IVDDLFVGNF-LGKDSDIVF---DYRQKATRTFEYLQGDYYIAPLFLDKVACHIVKNYLA 165

Query: 414 DLPKIKVPLILGIWGGKGQGKTFQCAL 494
            +  IK+PLILGIWGGKGQGKTFQ  L
Sbjct: 166 HILTIKIPLILGIWGGKGQGKTFQTEL 192

[89][TOP]
>UniRef100_B9FCX4 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
           Group RepID=B9FCX4_ORYSJ
          Length = 456

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = +3

Query: 237 MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM- 413
           +VDDLF G F  G   + V    +Y  ++  +F  ++  +YI+P FLDK+  HI KN++ 
Sbjct: 110 IVDDLFVGNF-LGKDSDIVF---DYRQKATRTFEYLQGDYYIAPLFLDKVACHIVKNYLA 165

Query: 414 DLPKIKVPLILGIWGGKGQGKTFQCAL 494
            +  IK+PLILGIWGGKGQGKTFQ  L
Sbjct: 166 HILTIKIPLILGIWGGKGQGKTFQTEL 192

[90][TOP]
>UniRef100_B8AVM5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
           RepID=B8AVM5_ORYSI
          Length = 456

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 42/87 (48%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = +3

Query: 237 MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM- 413
           +VDDLF G F  G   + V    +Y  ++  +F  ++  +YI+P FLDK+  HI KN++ 
Sbjct: 110 IVDDLFVGNF-LGKDSDIVF---DYRQKATRTFEYLQGDYYIAPLFLDKVACHIVKNYLA 165

Query: 414 DLPKIKVPLILGIWGGKGQGKTFQCAL 494
            +  IK+PLILGIWGGKGQGKTFQ  L
Sbjct: 166 HILTIKIPLILGIWGGKGQGKTFQTEL 192

[91][TOP]
>UniRef100_B8HYF8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Cyanothece
           sp. PCC 7425 RepID=B8HYF8_CYAP4
          Length = 423

 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 32/48 (66%), Positives = 41/48 (85%)
 Frame = +3

Query: 351 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           G+YI+P FLDK+++HI KN++DLP +KVPLILGI G KG+GKTF C L
Sbjct: 2   GYYIAPRFLDKLSVHITKNYLDLPNVKVPLILGIHGRKGEGKTFMCEL 49

[92][TOP]
>UniRef100_B0CCB7 Ribulose bisphosphate carboxylase activase, putative n=1
           Tax=Acaryochloris marina MBIC11017 RepID=B0CCB7_ACAM1
          Length = 416

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 32/48 (66%), Positives = 41/48 (85%)
 Frame = +3

Query: 351 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           G+Y+SP FLD++ +HI KNFMDLP ++VPLILGI G KG+GK+FQC L
Sbjct: 2   GYYLSPRFLDRLAVHITKNFMDLPGLRVPLILGIHGRKGEGKSFQCEL 49

[93][TOP]
>UniRef100_UPI000198412C PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI000198412C
          Length = 442

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 53/160 (33%), Positives = 77/160 (48%), Gaps = 1/160 (0%)
 Frame = +3

Query: 18  PFIQSALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVD 197
           PF   AL +      +   +G   G  R++ +S   A        +   GR      G +
Sbjct: 46  PFSLRALNSSNNDNPTGESAGGEAGQRRISEQSSWEA--------KDSEGRDYLYRLGKE 97

Query: 198 ASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFL 377
           A +    +     ++DDLF G F  G   + V    +Y  +   SF  ++  +YI+P F+
Sbjct: 98  ADNMNIAVGARAGIIDDLFVGNF-LGRDSDIVF---DYRQKVTRSFEYLQGDYYIAPVFM 153

Query: 378 DKMTIHIAKNFM-DLPKIKVPLILGIWGGKGQGKTFQCAL 494
           DK+  HI KN++  L    VPLILGIWGGKGQGK+FQ  L
Sbjct: 154 DKVVCHIVKNYIAHLLNTNVPLILGIWGGKGQGKSFQTEL 193

[94][TOP]
>UniRef100_Q115H0 Ribulose 1,5-bisphosphate carboxylase small subunit n=1
           Tax=Trichodesmium erythraeum IMS101 RepID=Q115H0_TRIEI
          Length = 423

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 30/47 (63%), Positives = 41/47 (87%)
 Frame = +3

Query: 354 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +YISP F+DK+ +HI KNF+++P+I+VPLI+GI G KG+GKTFQC L
Sbjct: 3   YYISPRFIDKLAVHITKNFLEIPRIRVPLIIGIHGRKGEGKTFQCQL 49

[95][TOP]
>UniRef100_B4WNZ5 Ribulose bisphosphate carboxylase, small subunit, putative n=1
           Tax=Synechococcus sp. PCC 7335 RepID=B4WNZ5_9SYNE
          Length = 455

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 31/47 (65%), Positives = 41/47 (87%)
 Frame = +3

Query: 354 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +YI+P FL+K+ +HI KN++DLP++KVPLILGI G KG+GKTFQC L
Sbjct: 3   YYIAPRFLNKLAVHITKNYLDLPQVKVPLILGIHGRKGEGKTFQCEL 49

[96][TOP]
>UniRef100_A9TYZ9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TYZ9_PHYPA
          Length = 458

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 45/99 (45%), Positives = 59/99 (59%), Gaps = 3/99 (3%)
 Frame = +3

Query: 207 DQQDITRGRE--MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLD 380
           D  +IT G    M+D LF G F  G   + V    +Y  +   SF +I   +YI+PAF+D
Sbjct: 104 DNLNITVGARTGMIDSLFTGDF-LGKEADIVF---KYRQKVTRSFEHITGDYYIAPAFMD 159

Query: 381 KMTIHIAKNFMDLP-KIKVPLILGIWGGKGQGKTFQCAL 494
           K+  HI KN++      KVPLILG+WGGKGQGK+FQ  L
Sbjct: 160 KVVTHIVKNYLAAQIDGKVPLILGVWGGKGQGKSFQTEL 198

[97][TOP]
>UniRef100_B9GLS2 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GLS2_POPTR
          Length = 428

 Score = 74.7 bits (182), Expect = 3e-12
 Identities = 41/87 (47%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
 Frame = +3

Query: 237 MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM- 413
           +VD LF G F  G   + V    +Y  +   SF  ++  +YI+P FLDK+  HI KN++ 
Sbjct: 97  VVDSLFAGNF-LGKDSDIVF---DYRQKVTRSFEYLQGDYYIAPLFLDKVVCHIVKNYLA 152

Query: 414 DLPKIKVPLILGIWGGKGQGKTFQCAL 494
               +KVPLILGIWGGKGQGK+FQ  L
Sbjct: 153 HRLNVKVPLILGIWGGKGQGKSFQTEL 179

[98][TOP]
>UniRef100_B2J8T8 Ribulose bisphosphate carboxylase, small chain n=1 Tax=Nostoc
           punctiforme PCC 73102 RepID=B2J8T8_NOSP7
          Length = 425

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 31/48 (64%), Positives = 40/48 (83%)
 Frame = +3

Query: 351 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           G+YI+P FLDK+ +HI KNF+ LP ++VP+ILGI G KG+GKTFQC L
Sbjct: 2   GYYIAPRFLDKLAVHITKNFLKLPGVRVPVILGIHGRKGEGKTFQCQL 49

[99][TOP]
>UniRef100_Q06721 Ribulose bisphosphate carboxylase/oxygenase activase n=1
           Tax=Anabaena sp. CA RepID=RCA_ANASC
          Length = 415

 Score = 73.9 bits (180), Expect = 5e-12
 Identities = 31/47 (65%), Positives = 40/47 (85%)
 Frame = +3

Query: 354 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +YI+P FLDK+ +HI KNF++LP ++VPLILGI G KG+GKTFQC L
Sbjct: 3   YYIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCEL 49

[100][TOP]
>UniRef100_Q3M678 Ribulose 1,5-bisphosphate carboxylase small subunit n=1
           Tax=Anabaena variabilis ATCC 29413 RepID=Q3M678_ANAVT
          Length = 414

 Score = 73.2 bits (178), Expect = 9e-12
 Identities = 30/47 (63%), Positives = 40/47 (85%)
 Frame = +3

Query: 354 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +YI+P FLDK+ +HI KNF+++P ++VPLILGI G KG+GKTFQC L
Sbjct: 3   YYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCEL 49

[101][TOP]
>UniRef100_A0Z9K4 Ribulose 1,5-bisphosphate carboxylase/oxygenase activase n=1
           Tax=Nodularia spumigena CCY9414 RepID=A0Z9K4_NODSP
          Length = 416

 Score = 73.2 bits (178), Expect = 9e-12
 Identities = 31/47 (65%), Positives = 40/47 (85%)
 Frame = +3

Query: 354 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +YI+P FLDK+ +HI KNF++LP ++VPLILGI G KG+GKTFQC L
Sbjct: 3   YYIAPRFLDKLGVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCQL 49

[102][TOP]
>UniRef100_P58555 Ribulose bisphosphate carboxylase/oxygenase activase n=1 Tax=Nostoc
           sp. PCC 7120 RepID=RCA_ANASP
          Length = 414

 Score = 73.2 bits (178), Expect = 9e-12
 Identities = 30/47 (63%), Positives = 40/47 (85%)
 Frame = +3

Query: 354 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +YI+P FLDK+ +HI KNF+++P ++VPLILGI G KG+GKTFQC L
Sbjct: 3   YYIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCEL 49

[103][TOP]
>UniRef100_A0YN90 AAA ATPase, central region n=1 Tax=Lyngbya sp. PCC 8106
           RepID=A0YN90_9CYAN
          Length = 445

 Score = 70.9 bits (172), Expect = 4e-11
 Identities = 30/47 (63%), Positives = 38/47 (80%)
 Frame = +3

Query: 354 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +YISP FLDK+ +HI KNF+ +  ++VPLILGI G KG+GKTFQC L
Sbjct: 3   YYISPRFLDKLAVHITKNFLKISNLRVPLILGIHGRKGEGKTFQCEL 49

[104][TOP]
>UniRef100_B9RGR9 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast,
           putative n=1 Tax=Ricinus communis RepID=B9RGR9_RICCO
          Length = 428

 Score = 67.4 bits (163), Expect = 5e-10
 Identities = 40/87 (45%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
 Frame = +3

Query: 237 MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM- 413
           ++D LF G F  G   + V    +Y  +   SF  ++  +YI+P FL  M  HI KN++ 
Sbjct: 98  VIDPLFAGNF-LGRDSDIVF---DYRQKVTRSFEYLKGDYYIAPVFL-VMICHIVKNYIA 152

Query: 414 DLPKIKVPLILGIWGGKGQGKTFQCAL 494
            L  +KVPLILGIWGGKGQGK+FQ  L
Sbjct: 153 HLLNVKVPLILGIWGGKGQGKSFQTEL 179

[105][TOP]
>UniRef100_B4W1T9 Ribulose bisphosphate carboxylase, small subunit, putative n=1
           Tax=Microcoleus chthonoplastes PCC 7420
           RepID=B4W1T9_9CYAN
          Length = 447

 Score = 67.0 bits (162), Expect = 6e-10
 Identities = 27/47 (57%), Positives = 39/47 (82%)
 Frame = +3

Query: 354 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +YI+P+F DK+ +HI KN+++L  ++VPLILGI G KG+GK+FQC L
Sbjct: 8   YYIAPSFRDKLAVHITKNYLELEGVRVPLILGIHGRKGEGKSFQCEL 54

[106][TOP]
>UniRef100_C1N8N0 Predicted protein (Fragment) n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N8N0_9CHLO
          Length = 505

 Score = 65.9 bits (159), Expect = 1e-09
 Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 17/122 (13%)
 Frame = +3

Query: 180 IDAGVDASDDQQDITRGREMVDDLFQGG----FGAGGTHNAVLSSQEYLSQSRA-SFNNI 344
           ++ G  +S+   ++   + ++DD+F G     F  G   +       Y       SF N+
Sbjct: 105 VELGKQSSNTNTEVGARKGIIDDVFAGTANAKFNLGADSDIASGRLRYRDVEHVRSFKNL 164

Query: 345 EDGFYISPAFLDKMTIHIAKNFM---DLPKI---------KVPLILGIWGGKGQGKTFQC 488
              F++ P F+DK+++H+AKN M   D P           KVPLILG+WG KG GKTF  
Sbjct: 165 FGDFHVPPLFVDKVSLHVAKNLMADSDNPGASANPLGGLTKVPLILGVWGAKGCGKTFNL 224

Query: 489 AL 494
            L
Sbjct: 225 EL 226

[107][TOP]
>UniRef100_C1MW61 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1MW61_9CHLO
          Length = 498

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 2/106 (1%)
 Frame = +3

Query: 183 DAGVDASDDQQDITRGREMVDDLFQGGFGAGGT--HNAVLSSQEYLSQSRASFNNIEDGF 356
           + G  +S+ + ++   + +VDD+F G   A      +A +++ E       S  N+ DG 
Sbjct: 93  ELGRQSSNLRTEVGARKGVVDDVFAGTANANFVLGADADIATGELRYTEARSLTNVVDGC 152

Query: 357 YISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           Y+ P F+DK+ +H+ KN +     +VPLILGIWG KG GK++   L
Sbjct: 153 YVPPRFMDKVCVHLVKNHLAEGVGQVPLILGIWGEKGCGKSYTLEL 198

[108][TOP]
>UniRef100_A8JIJ0 RuBisCO activase-like protein n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8JIJ0_CHLRE
          Length = 533

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 33/59 (55%), Positives = 43/59 (72%), Gaps = 5/59 (8%)
 Frame = +3

Query: 333 FNNIEDGFYISPAFLDKMTIHIAKNFM-DLPKI----KVPLILGIWGGKGQGKTFQCAL 494
           FNNI   +Y++PAFL K+ +H+AKN++ DL  +    +VPLILGIWG KG GKTFQ  L
Sbjct: 157 FNNIVGDYYVAPAFLMKVAMHMAKNYLFDLGAMSANTRVPLILGIWGEKGMGKTFQTEL 215

[109][TOP]
>UniRef100_Q2JX50 Ribulose bisphosphate carboxylase/oxygenase activase n=1
           Tax=Synechococcus sp. JA-3-3Ab RepID=Q2JX50_SYNJA
          Length = 407

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 27/47 (57%), Positives = 34/47 (72%)
 Frame = +3

Query: 354 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           +YI P FL  + +H+ KN + LP + VPLILGI G KG+GKTFQC L
Sbjct: 3   YYIPPTFLKVVALHLTKNHLPLPDVPVPLILGIHGRKGEGKTFQCNL 49

[110][TOP]
>UniRef100_C1E7G4 Predicted protein (Fragment) n=1 Tax=Micromonas sp. RCC299
           RepID=C1E7G4_9CHLO
          Length = 396

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 37/101 (36%), Positives = 50/101 (49%), Gaps = 15/101 (14%)
 Frame = +3

Query: 237 MVDDLFQGG----FGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 404
           +VDD+F G     F  G   +       Y  +   SFNN+   F++   F+D++ +HIAK
Sbjct: 109 VVDDVFAGKNNSKFNLGADSDIASGKLRYTMER--SFNNLVGEFHVPKQFVDRVALHIAK 166

Query: 405 NFM-----------DLPKIKVPLILGIWGGKGQGKTFQCAL 494
           N +            L   +VPLILGIWG KG GKTF   L
Sbjct: 167 NLLMDSTNPGVGENALGLTRVPLILGIWGSKGCGKTFNLEL 207

[111][TOP]
>UniRef100_A4S631 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus
           CCE9901 RepID=A4S631_OSTLU
          Length = 342

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 22/137 (16%)
 Frame = +3

Query: 150 SRKQMGRWRSIDAGV-DASDDQQDITRGREMVDDLFQ----GGFGAGGTHNAVLSSQEYL 314
           ++K +GR   ++ G  D  +   ++   + +VDD+F     G F  G   +       Y 
Sbjct: 14  TQKNIGRDYLVELGKNDTGNTNTNVGARQGVVDDVFTRNATGEFQLGADSDIASGELRYR 73

Query: 315 SQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM---DLPKIK--------------VPLI 443
            Q    F N+   ++  PAF++K++ H+ KNF+    L  ++               PLI
Sbjct: 74  YQEARKFKNLVGDYHCPPAFMEKVSGHLVKNFLFGGGLRHVREMTNEAGVVVQPPNTPLI 133

Query: 444 LGIWGGKGQGKTFQCAL 494
           LG+WGGKG GK+F   L
Sbjct: 134 LGVWGGKGCGKSFNLEL 150

[112][TOP]
>UniRef100_Q01AV2 26S proteasome regulatory complex, ATPase RPT4 (ISS) n=1
           Tax=Ostreococcus tauri RepID=Q01AV2_OSTTA
          Length = 584

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 4/137 (2%)
 Frame = +3

Query: 96  ARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAG 275
           AR + R    A+ +  +  R+ + R  ++    DA   Q  I   R  V++    G   G
Sbjct: 3   ARASARVGSTARARAASRGRRVVAR--AVGGREDALGGQDFIYSQRSGVEETLFKGVVLG 60

Query: 276 GTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM----DLPKIKVPLI 443
              +A ++S E+      SF N+E  FY+   F++++  H+AKN +     L   K  ++
Sbjct: 61  V--DADVASGEHREGGFRSFGNVEGEFYVPERFMERVATHVAKNLLADRDGLRSAKPAVM 118

Query: 444 LGIWGGKGQGKTFQCAL 494
           LGIWG KG GKTF   L
Sbjct: 119 LGIWGHKGCGKTFNVEL 135

[113][TOP]
>UniRef100_Q7NHH0 Ribulose-bisphosphate carboxylase activase n=1 Tax=Gloeobacter
           violaceus RepID=Q7NHH0_GLOVI
          Length = 294

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 24/44 (54%), Positives = 34/44 (77%)
 Frame = +3

Query: 351 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTF 482
           G++I   F D++ +HIAKN+  LPK++ PLILGI G KG+GK+F
Sbjct: 3   GYFIPDRFRDRIILHIAKNYAALPKVQTPLILGIHGPKGEGKSF 46

[114][TOP]
>UniRef100_P85086 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           (Fragments) n=1 Tax=Arachis hypogaea RepID=RCA_ARAHY
          Length = 140

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 39/90 (43%), Positives = 43/90 (47%)
 Frame = +3

Query: 195 DASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAF 374
           D SDDQQDITRG  MVD LFQ      GTH AV+SS EY+SQ                  
Sbjct: 5   DISDDQQDITRG--MVDSLFQAPMN-DGTHYAVMSSYEYISQG----------------- 44

Query: 375 LDKMTIHIAKNFMDLPKIKVPLILGIWGGK 464
                            ++VPLILGIWGGK
Sbjct: 45  -----------------LRVPLILGIWGGK 57

[115][TOP]
>UniRef100_B5GAS7 Truncated magnesium or manganese-dependent protein phosphatase
           (Fragment) n=1 Tax=Streptomyces sp. SPB74
           RepID=B5GAS7_9ACTO
          Length = 445

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 63/177 (35%), Positives = 77/177 (43%), Gaps = 28/177 (15%)
 Frame = +1

Query: 46  CRSP*RAAPSAASAWAVPA---SPPVACAGRSCRLWPLAASRWAAGGRST---RASTRPM 207
           CRS  RA PSAASA +  A   SPP      S   W  A+ R ++   ST   R S R  
Sbjct: 130 CRSSRRATPSAASASSTRARTPSPPRNATSSS--PWAAASPRASSAPCSTSRRRTSPRDS 187

Query: 208 TSKTSLAAARWWTTC----SRAASVPAAP---------TTQCCPARST*ARAAPRSTTLR 348
           + + S A +R   TC    SR  + P AP         T+  CPA    A  AP S T R
Sbjct: 188 SRRCSRAPSR---TCPAPRSRCVTGPPAPGATSAATGTTSYRCPA----AVPAPSSATCR 240

Query: 349 TASTSRPLSW---------TR*PSTLPRTSWTCPRSRCPSFWVSGVARARARPSSAR 492
             + + P SW         TR  +T P  SW  PRS     W S    A +RP+S R
Sbjct: 241 ATTRTPPPSWASSASRCAPTRPRATRPPPSWPAPRSS----WTSWTPTA-SRPASTR 292

[116][TOP]
>UniRef100_A2ZH35 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
           RepID=A2ZH35_ORYSI
          Length = 360

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 41/120 (34%), Positives = 55/120 (45%)
 Frame = +3

Query: 135 QVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYL 314
           +V    + +  RW+ +    D SDDQQDITRG+ +VD LFQ   G  GTH A +      
Sbjct: 51  EVDEEKQTEQDRWKGL--AYDISDDQQDITRGKGLVDSLFQAPMG-DGTHEARV------ 101

Query: 315 SQSRASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
              +    N++ G +           HI+KN M LP I             QGK+FQC L
Sbjct: 102 --PQPGSQNVQPGQHHG---------HISKNLMKLPNI-------------QGKSFQCEL 137

[117][TOP]
>UniRef100_Q53MC3 Expressed protein n=1 Tax=Oryza sativa Japonica Group
           RepID=Q53MC3_ORYSJ
          Length = 366

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 41/120 (34%), Positives = 55/120 (45%)
 Frame = +3

Query: 135 QVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYL 314
           +V    + +  RW+ +    D SDDQQDITRG+ +VD LFQ   G  GTH A +      
Sbjct: 51  EVDEEKQTEQDRWKGL--AYDISDDQQDITRGKGLVDSLFQAPMG-DGTHEARV------ 101

Query: 315 SQSRASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
              +    N++ G +           HI+KN M LP I             QGK+FQC L
Sbjct: 102 --PQPGSQNVQPGQHHG---------HISKNLMKLPNI-------------QGKSFQCDL 137

[118][TOP]
>UniRef100_C1MVP5 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1MVP5_9CHLO
          Length = 390

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 23/55 (41%), Positives = 33/55 (60%)
 Frame = +3

Query: 330 SFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCAL 494
           S  N++  +++   F DK   H+ KN +    ++ PLILGIWGGKG GK+F   L
Sbjct: 8   SLANVQGDYHVPERFRDKFATHLVKNALASSNLQTPLILGIWGGKGCGKSFNVEL 62