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[1][TOP]
>UniRef100_A8I003 Ycf32-related subunit of photosystem II n=1 Tax=Chlamydomonas
reinhardtii RepID=A8I003_CHLRE
Length = 260
Score = 251 bits (642), Expect = 1e-65
Identities = 135/135 (100%), Positives = 135/135 (100%)
Frame = +2
Query: 56 MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA 235
MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA
Sbjct: 1 MAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAA 60
Query: 236 SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA 415
SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA
Sbjct: 61 SWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNKRA 120
Query: 416 VPAAVGMGAAASLLF 460
VPAAVGMGAAASLLF
Sbjct: 121 VPAAVGMGAAASLLF 135
Score = 127 bits (320), Expect = 3e-28
Identities = 65/77 (84%), Positives = 72/77 (93%)
Frame = +2
Query: 230 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 409
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 130 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVMGWVGFNIFGSLQAQLNQMDAKNK 189
Query: 410 RAVPAAVGMGAAASLLF 460
RAVPAAVGMGAAASLLF
Sbjct: 190 RAVPAAVGMGAAASLLF 206
Score = 95.5 bits (236), Expect = 2e-18
Identities = 47/60 (78%), Positives = 55/60 (91%)
Frame = +2
Query: 230 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 409
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL+QMDAKNK
Sbjct: 201 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLSQMDAKNK 260
[2][TOP]
>UniRef100_A8JKA1 Ycf32-related polyprotein of photosystem II (Fragment) n=1
Tax=Chlamydomonas reinhardtii RepID=A8JKA1_CHLRE
Length = 354
Score = 166 bits (421), Expect = 6e-40
Identities = 87/87 (100%), Positives = 87/87 (100%)
Frame = +2
Query: 200 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 379
VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA
Sbjct: 1 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 60
Query: 380 QLNQMDAKNKRAVPAAVGMGAAASLLF 460
QLNQMDAKNKRAVPAAVGMGAAASLLF
Sbjct: 61 QLNQMDAKNKRAVPAAVGMGAAASLLF 87
Score = 127 bits (320), Expect = 3e-28
Identities = 65/77 (84%), Positives = 72/77 (93%)
Frame = +2
Query: 230 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 409
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 82 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 141
Query: 410 RAVPAAVGMGAAASLLF 460
RAVPAAVGMGAAASLLF
Sbjct: 142 RAVPAAVGMGAAASLLF 158
Score = 127 bits (320), Expect = 3e-28
Identities = 65/77 (84%), Positives = 72/77 (93%)
Frame = +2
Query: 230 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 409
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 153 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 212
Query: 410 RAVPAAVGMGAAASLLF 460
RAVPAAVGMGAAASLLF
Sbjct: 213 RAVPAAVGMGAAASLLF 229
Score = 127 bits (320), Expect = 3e-28
Identities = 65/77 (84%), Positives = 72/77 (93%)
Frame = +2
Query: 230 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 409
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQLNQMDAKNK
Sbjct: 224 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLNQMDAKNK 283
Query: 410 RAVPAAVGMGAAASLLF 460
RAVPAAVGMGAAASLLF
Sbjct: 284 RAVPAAVGMGAAASLLF 300
Score = 95.1 bits (235), Expect = 2e-18
Identities = 47/60 (78%), Positives = 54/60 (90%)
Frame = +2
Query: 230 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKNK 409
AAS + A +A+A+TE+A+LAASDNR ILATLLVPV+GWVGFNIFGSLQAQL QMDAKNK
Sbjct: 295 AASLLFAQSAEASTEIATLAASDNRVAILATLLVPVIGWVGFNIFGSLQAQLRQMDAKNK 354
[3][TOP]
>UniRef100_C1MZ88 Photosystem II PsbY protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MZ88_9CHLO
Length = 279
Score = 61.6 bits (148), Expect = 3e-08
Identities = 45/144 (31%), Positives = 67/144 (46%), Gaps = 4/144 (2%)
Frame = +2
Query: 29 ALCLPRLVKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGT 208
++ +P L + R+S + R LPVR A V A A + ++G
Sbjct: 3 SIAMPVLSAAVSARVSVRAKVSTRGLRAVGVKPLPVRPAAVRVSASAAAESQTDDLQLGQ 62
Query: 209 VATLSSVAASWMMAGNAQAATE-LASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQL 385
A L+ A + A AA+E L+ +A D+RA I +L P +GWV +NI Q
Sbjct: 63 TAALTLAGALALGTEQASAASESLSQVAGFDSRALIFLGILGPAIGWVLYNILTPGLNQF 122
Query: 386 NQMDAKN---KRAVPAAVGMGAAA 448
N M KN K+ +P +G+ AAA
Sbjct: 123 NSMQEKNARGKKGIPLGLGLSAAA 146
[4][TOP]
>UniRef100_A9U315 Predicted protein (Fragment) n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U315_PHYPA
Length = 137
Score = 57.8 bits (138), Expect = 4e-07
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +2
Query: 200 VGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQA 379
V V T ++ A+ + +A A+ ++ +LA DNR L L+P +GWV FNI LQ
Sbjct: 2 VNLVCTTGAMFAAMATSESAMASQQIMALAEGDNRVVALLIPLIPAIGWVLFNI---LQP 58
Query: 380 QLNQMD-AKNKRAVPAAVGMGAAASLL 457
LNQ+D + +A+ A G+GAAA+L+
Sbjct: 59 ALNQVDKMRGAKALVAGAGLGAAATLM 85
[5][TOP]
>UniRef100_C1E7Y4 Photosystem II PsbY protein n=1 Tax=Micromonas sp. RCC299
RepID=C1E7Y4_9CHLO
Length = 191
Score = 57.0 bits (136), Expect = 6e-07
Identities = 38/77 (49%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Frame = +2
Query: 224 SVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQM--D 397
S AA M A AATE LA D R I VPVLGWVG+NI G QL +M D
Sbjct: 56 SAAALMGMPEAADAATEAMQLADLDARIAIFGAF-VPVLGWVGYNILGPGLKQLEKMQQD 114
Query: 398 AKNKRAVPAAVGMGAAA 448
A K+ V A VG+ AAA
Sbjct: 115 AAKKKGVAAGVGLSAAA 131
[6][TOP]
>UniRef100_Q00Y99 Manganese-binding protein PsbY, photosystem II-associated-s (ISS)
n=1 Tax=Ostreococcus tauri RepID=Q00Y99_OSTTA
Length = 265
Score = 56.6 bits (135), Expect = 8e-07
Identities = 49/137 (35%), Positives = 60/137 (43%), Gaps = 2/137 (1%)
Frame = +2
Query: 50 VKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSV 229
V + ALR S A R R AK R A+ S V A+ E S+
Sbjct: 5 VNVPALRASRAAPLAKRE--RRAK-----RTAIASKVATKVATIESDEIVTRGQTAAMSL 57
Query: 230 AASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN- 406
AA+ + A A AA E+ LA D R I + PVLGWV +NI G Q M KN
Sbjct: 58 AATMLFADQAHAAQEVGDLAGIDGRIAIFF-VFAPVLGWVAYNILGPGLRQFEDMQKKNA 116
Query: 407 -KRAVPAAVGMGAAASL 454
+ V A G+ AAA L
Sbjct: 117 KSKGVLAGAGLSAAALL 133
[7][TOP]
>UniRef100_B6SUJ7 Photosystem II core complex proteins psbY n=1 Tax=Zea mays
RepID=B6SUJ7_MAIZE
Length = 196
Score = 56.2 bits (134), Expect = 1e-06
Identities = 42/137 (30%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Frame = +2
Query: 47 LVKMAALRMSAPTSAALRSSVRSAKPVLPVRRAVRS--VVVRAQASEEQLGFKVGTVATL 220
+ +A + + P RS+ S + +R R+ V A S G +A+
Sbjct: 1 MATIATMALLKPARIVARSAPPSTSGSVSLRVPARAKKAAVSASVSSALAGAFFSALASS 60
Query: 221 SSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDA 400
+ A+ +A A AA A SDNR +L ++ P +GWV +NI LQ LNQ++
Sbjct: 61 DAALAAQRVADVAAAAD-----AGSDNRGQLLLFVVAPAIGWVLYNI---LQPALNQLNR 112
Query: 401 KNKRAVPAAVGMGAAAS 451
+AV A +G+GAAA+
Sbjct: 113 MRSQAVVAGLGLGAAAA 129
[8][TOP]
>UniRef100_A4S5C8 Possible psbY, PSII-Y, photosystem II polypeptide n=1
Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S5C8_OSTLU
Length = 416
Score = 54.7 bits (130), Expect = 3e-06
Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Frame = +2
Query: 65 LRMSAPTSAALRSSVRSAKPVLPVRRAVRSVVVRAQASEEQLGFKVGTVATLSSVAASWM 244
+ + A A R + R+A+ + RA S VV + + + + G A +++ AAS
Sbjct: 9 ITLPARAPARARRTARTAQSARVIARARTSAVVEDEFATDDDVVRRGQTAAMAT-AASMF 67
Query: 245 MAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDAKN-----K 409
A A AA EL A D R I + PVLGWV +NI QL M A N K
Sbjct: 68 FADRADAAQELMQTAL-DGRPLIFLAVFGPVLGWVAYNILSPGLRQLENMQAVNAKSSKK 126
Query: 410 RAVPAAVGMGAAASLL 457
RA A G A++L+
Sbjct: 127 RAAGALAGGLTASALM 142
[9][TOP]
>UniRef100_A9SPH7 PsbY photosystem II polypeptide n=1 Tax=Physcomitrella patens
subsp. patens RepID=A9SPH7_PHYPA
Length = 368
Score = 53.9 bits (128), Expect = 5e-06
Identities = 31/79 (39%), Positives = 42/79 (53%)
Frame = +2
Query: 197 KVGTVATLSSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQ 376
K G + L AS +A +A AA E+A+LA SD+R I+ LL+P +GWV FNI
Sbjct: 205 KRGVIGALGLGTASLFLAPHADAAQEIATLADSDSRGLIIIGLLLPAVGWVLFNILKPAL 264
Query: 377 AQLNQMDAKNKRAVPAAVG 433
Q+N + N P G
Sbjct: 265 NQINNIVEGNDTGAPVKRG 283
[10][TOP]
>UniRef100_B6SQV2 Photosystem II core complex proteins psbY n=1 Tax=Zea mays
RepID=B6SQV2_MAIZE
Length = 191
Score = 53.1 bits (126), Expect = 9e-06
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 2/137 (1%)
Frame = +2
Query: 47 LVKMAALRMSAPTSAALRSSVRSAKPVLPVR--RAVRSVVVRAQASEEQLGFKVGTVATL 220
+ MA L+ +A +A S S L VR +A + + AS G A L
Sbjct: 4 IATMALLKPAAKAAARSAPSTSSGSVSLRVRTGQAAKKAALSVSASSTLAG------AFL 57
Query: 221 SSVAASWMMAGNAQAATELASLAASDNRAGILATLLVPVLGWVGFNIFGSLQAQLNQMDA 400
+++A+S +A A A+ A D+R +L ++ P +GWV +NI QLN+M
Sbjct: 58 AALASS----PDAALADVAAADAGGDSRGQLLLVVVAPAIGWVLYNILQPALNQLNRM-- 111
Query: 401 KNKRAVPAAVGMGAAAS 451
++ +AV A +G+GAAA+
Sbjct: 112 RSSQAVAAGLGLGAAAA 128