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[1][TOP]
>UniRef100_A8IR08 Predicted protein (Fragment) n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IR08_CHLRE
Length = 147
Score = 281 bits (720), Expect = 1e-74
Identities = 135/135 (100%), Positives = 135/135 (100%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA
Sbjct: 13 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 72
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP
Sbjct: 73 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 132
Query: 364 RQFDAESCNMLANMA 408
RQFDAESCNMLANMA
Sbjct: 133 RQFDAESCNMLANMA 147
[2][TOP]
>UniRef100_A4BK94 Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain
n=1 Tax=Reinekea blandensis MED297 RepID=A4BK94_9GAMM
Length = 301
Score = 156 bits (394), Expect = 9e-37
Identities = 79/142 (55%), Positives = 99/142 (69%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L +LDT PE+RFD ITRL F PIALVSLVD++RQWFKS GL VR TDR SFC
Sbjct: 19 RLNILDTPPEERFDRITRLARATFHVPIALVSLVDENRQWFKSCFGLDVRHTDRNISFCG 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+ + +LV+EN L D RF +NPLV+G+PHIRFYAG PL A G R+G+LC+ID KP
Sbjct: 79 HAIHSD--ALLVIENTLIDSRFHDNPLVIGNPHIRFYAGAPLHAPEGERIGTLCLIDRKP 136
Query: 364 RQFDAESCNMLANMAEMVVREI 429
RQ D L +A++V +E+
Sbjct: 137 RQLDHSERKQLRQLADIVEQEL 158
[3][TOP]
>UniRef100_C9P933 Signal transduction histidine kinase n=1 Tax=Vibrio metschnikovii
CIP 69.14 RepID=C9P933_VIBME
Length = 642
Score = 155 bits (391), Expect = 2e-36
Identities = 81/165 (49%), Positives = 115/165 (69%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
K G+L++ E RFD ITRL +F PIAL+SLVD+DRQWFKS QGL +QT R+ SFC
Sbjct: 19 KTGLLNSGSEARFDRITRLAQQIFSVPIALISLVDRDRQWFKSRQGLDAQQTPREISFCG 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+L + E+ V+ENAL D RF +NPLV+G+P IRFYAG PL +T G R+G+LC+ID++P
Sbjct: 79 HAIL--NSEIFVIENALVDQRFCDNPLVMGAPDIRFYAGAPLHSTKGYRIGTLCLIDSQP 136
Query: 364 RQFDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQL 498
+ F ++ +ML ++A V + LI+A+++ +E L + QL
Sbjct: 137 QSFSSKQRSMLKDLAATV------EALIQAEELSNERLGKLTAQL 175
[4][TOP]
>UniRef100_A1TRS2 Diguanylate phosphodiesterase with GAF sensor n=1 Tax=Acidovorax
citrulli AAC00-1 RepID=A1TRS2_ACIAC
Length = 595
Score = 154 bits (388), Expect = 5e-36
Identities = 85/167 (50%), Positives = 107/167 (64%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LDT P + FD ITRL +F PIALVSLVD DRQWFKS GLPVR+T R+ +FC T
Sbjct: 19 GLLDTPPTEEFDRITRLASRLFDVPIALVSLVDADRQWFKSQIGLPVRETCREDAFCDHT 78
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
+ EV+VVE+AL+D RF NPLV G PHIRFYAG PL+ LGSLC+ID+ PR
Sbjct: 79 IRTS--EVMVVEDALQDPRFAANPLVQGPPHIRFYAGAPLILRGHHHLGSLCLIDSVPRA 136
Query: 370 FDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQLIRAL 510
FD LA++A +V+ +I D A ++ L QL++ L
Sbjct: 137 FDTAQQRQLADLAALVMAQI--DLQCAAARLDESTLLPNRTQLLQDL 181
[5][TOP]
>UniRef100_Q4KBH0 Diguanylate cyclase, putative n=1 Tax=Pseudomonas fluorescens Pf-5
RepID=Q4KBH0_PSEF5
Length = 322
Score = 152 bits (384), Expect = 1e-35
Identities = 78/142 (54%), Positives = 99/142 (69%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L VLDT PE+RFD +TRL +F PIALVSLVD DRQWFKS GL V +T R SFC
Sbjct: 19 ELNVLDTSPEERFDRLTRLAKRLFNVPIALVSLVDADRQWFKSCVGLDVSETSRDISFCG 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+L + ++L V +A D RF +NPLV+G+P IRFYAGCPL TNG +LG+LC+ID KP
Sbjct: 79 HAILGD--QILTVPDAGLDERFHDNPLVVGAPGIRFYAGCPLTVTNGSKLGTLCLIDIKP 136
Query: 364 RQFDAESCNMLANMAEMVVREI 429
R D E +L ++A M +E+
Sbjct: 137 RDLDDEDRALLRDLARMAEQEL 158
[6][TOP]
>UniRef100_A3YBC5 Diguanylate cyclase, putative n=1 Tax=Marinomonas sp. MED121
RepID=A3YBC5_9GAMM
Length = 324
Score = 152 bits (383), Expect = 2e-35
Identities = 76/142 (53%), Positives = 100/142 (70%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
++ VLDT PE+RFD +TR+ +F PIALVSL+DKDRQWFKS GLPV +T R SFC
Sbjct: 19 EMNVLDTLPEERFDRVTRMAKNLFHVPIALVSLIDKDRQWFKSCDGLPVTETGRDISFCG 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+L ++ + NALED RF NPLV G P+IRFYAG PL A NG ++G+LCIID++P
Sbjct: 79 HAILGDN--TFYIPNALEDQRFFYNPLVTGDPNIRFYAGHPLKAANGEKIGTLCIIDSEP 136
Query: 364 RQFDAESCNMLANMAEMVVREI 429
++ + E N LA +A V +E+
Sbjct: 137 KELNEEELNCLAELANTVEQEL 158
[7][TOP]
>UniRef100_A1S6Z8 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella amazonensis
SB2B RepID=A1S6Z8_SHEAM
Length = 327
Score = 151 bits (381), Expect = 3e-35
Identities = 76/142 (53%), Positives = 99/142 (69%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L VLDTE E+RFD +TRL +F PI L+SLVD DRQWFKS GL +T R SFC
Sbjct: 20 LNVLDTEAEERFDRLTRLARRLFDVPICLISLVDSDRQWFKSCIGLSQSETRRDISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
++ ++ V+E+ALED+RF +NPLV G PHIRFYAG PL +NG R+G+LCIID K R
Sbjct: 80 AIM--QADIFVIEDALEDLRFADNPLVTGEPHIRFYAGYPLTLSNGHRVGTLCIIDRKAR 137
Query: 367 QFDAESCNMLANMAEMVVREIE 432
+F+ E L ++ ++VV E+E
Sbjct: 138 RFEPEDYCDLEDLGKLVVSELE 159
[8][TOP]
>UniRef100_A4JE43 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia
vietnamiensis G4 RepID=A4JE43_BURVG
Length = 323
Score = 150 bits (380), Expect = 4e-35
Identities = 78/141 (55%), Positives = 98/141 (69%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT PE+RFD ITRL +F PIA+VSLVD+DRQWFKS GL QT R SFCA
Sbjct: 20 LSILDTPPEERFDRITRLARRLFDVPIAVVSLVDEDRQWFKSHPGLDATQTSRDVSFCAH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
LL + + +VV++AL D RF +NPLV G P IRFYAG PL A NG +G+LC+ID +PR
Sbjct: 80 ALLAD--DTMVVKDALNDDRFHDNPLVTGQPGIRFYAGRPLAAPNGAPVGTLCLIDTRPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
+ A+ +L ++A M REI
Sbjct: 138 ELCADELALLGDLAHMTEREI 158
[9][TOP]
>UniRef100_A1U6X2 Sensor protein n=1 Tax=Marinobacter aquaeolei VT8
RepID=A1U6X2_MARAV
Length = 681
Score = 150 bits (380), Expect = 4e-35
Identities = 77/144 (53%), Positives = 97/144 (67%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE+RFD +TRL F PIALVSLVD++RQWFKS GL VR+T R SFC +
Sbjct: 22 LLDTPPEERFDRVTRLAAEAFDVPIALVSLVDRERQWFKSCYGLGVRETGRDISFCGHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L E VV +AL D RF +NPLV G PHIRFYAG PL +G R+G+LCIID KPR F
Sbjct: 82 LKS--EAFVVSDALADERFSDNPLVTGEPHIRFYAGAPLEDRSGFRIGTLCIIDKKPRGF 139
Query: 373 DAESCNMLANMAEMVVREIEKDKL 444
L ++A+++ RE++ +L
Sbjct: 140 SNRDEKTLRDLADIIERELQFQEL 163
[10][TOP]
>UniRef100_Q1YRB1 Diguanylate cyclase, putative n=1 Tax=gamma proteobacterium
HTCC2207 RepID=Q1YRB1_9GAMM
Length = 319
Score = 150 bits (380), Expect = 4e-35
Identities = 75/139 (53%), Positives = 99/139 (71%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT E+RFD +TR+ +F PIALVSLVDKDRQWFKS GLPV +T R SFC ++
Sbjct: 22 ILDTPQEERFDRLTRMARRLFDVPIALVSLVDKDRQWFKSRIGLPVSETPRDISFCGHSI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L E EV ++ +A D RF++NPLV+ P+IRFYAGCPL A NG ++G+LCIID+KPR F
Sbjct: 82 LGE--EVFIIPDASSDERFQDNPLVIDKPNIRFYAGCPLRALNGTQIGTLCIIDDKPRDF 139
Query: 373 DAESCNMLANMAEMVVREI 429
+ L ++A M +E+
Sbjct: 140 SEADLSALTDLAAMAEQEL 158
[11][TOP]
>UniRef100_Q1QSF1 Diguanylate phosphodiesterase with GAF sensor n=1
Tax=Chromohalobacter salexigens DSM 3043
RepID=Q1QSF1_CHRSD
Length = 669
Score = 150 bits (378), Expect = 7e-35
Identities = 74/157 (47%), Positives = 106/157 (67%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+LG++DT PEKRFDDITRL VF PI L++LVD+ RQWFKS G+ +T R ++FCA
Sbjct: 79 RLGLMDTPPEKRFDDITRLAARVFGVPIVLITLVDRHRQWFKSRFGIDACETSRDNAFCA 138
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
LL ++LV+E+ D RFR++PLV +P+IRFYAG + GL LG+LC+ID P
Sbjct: 139 HALLER--KLLVIEDTTRDARFRDHPLVTETPYIRFYAGAVIRTAAGLPLGTLCLIDRHP 196
Query: 364 RQFDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEM 474
R FDA +L ++A +V EI D ++ ++ ++E+
Sbjct: 197 RHFDASQREILLDLARLVENEIGDDAIMRLERARAEI 233
[12][TOP]
>UniRef100_B8KKX5 Diguanylate cyclase (Ggdef domain) n=1 Tax=gamma proteobacterium
NOR5-3 RepID=B8KKX5_9GAMM
Length = 334
Score = 149 bits (377), Expect = 9e-35
Identities = 76/141 (53%), Positives = 100/141 (70%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT PE+RFD ITR+ +F PI+LVSLVD +RQWFKS QGL +T R SFC
Sbjct: 20 LRILDTAPEERFDRITRMAKRMFGVPISLVSLVDSERQWFKSAQGLDATETPRDISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ + E+L V NAL+D RF +NPLV PHIRFYAG PL+A NG ++G+LC+ID++PR
Sbjct: 80 AIAGD--ELLYVPNALDDKRFHDNPLVTAEPHIRFYAGNPLMAANGHKVGTLCLIDSEPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
+ D E +L ++A MV +EI
Sbjct: 138 ELDDEDKLLLEDLAVMVEQEI 158
[13][TOP]
>UniRef100_A4SI79 GGDEF domain protein n=1 Tax=Aeromonas salmonicida subsp.
salmonicida A449 RepID=A4SI79_AERS4
Length = 318
Score = 149 bits (376), Expect = 1e-34
Identities = 75/142 (52%), Positives = 99/142 (69%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
++ +LDT E+RF+ ITR+ +F PI+LVSLVD+DRQWFKS GLPV +T R SFC
Sbjct: 19 RMAILDTSAEERFERITRMARNMFDVPISLVSLVDEDRQWFKSCCGLPVPETPRDISFCG 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+L + ++ VVE+A D+RF +NPLV G PHIRFYAG PL G +LG+LCIID KP
Sbjct: 79 HAILGD--DLFVVEDATRDLRFADNPLVSGDPHIRFYAGSPLQIGEGYKLGTLCIIDRKP 136
Query: 364 RQFDAESCNMLANMAEMVVREI 429
R D ++L ++A MV RE+
Sbjct: 137 RLLDERQRDLLTDLAGMVEREL 158
[14][TOP]
>UniRef100_Q39GU9 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia sp. 383
RepID=Q39GU9_BURS3
Length = 323
Score = 149 bits (375), Expect = 1e-34
Identities = 76/141 (53%), Positives = 97/141 (68%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT PE+RFD +TRL +F PIALVSLVD DRQWFKS GL V QT R SFC+
Sbjct: 20 LSILDTPPEERFDRLTRLARRLFDVPIALVSLVDDDRQWFKSHAGLDVTQTSRDVSFCSH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
LL + +V+++AL D RF +NPLV G+P IRFYAG PL A NG +G+LC+ID +PR
Sbjct: 80 ALLEGN--TMVIQDALNDNRFHDNPLVTGAPGIRFYAGRPLTAPNGAPIGTLCLIDTRPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
+ + +L ++A M REI
Sbjct: 138 SLEPDELALLGDLAHMTEREI 158
[15][TOP]
>UniRef100_B2SZU2 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia
phytofirmans PsJN RepID=B2SZU2_BURPP
Length = 326
Score = 149 bits (375), Expect = 1e-34
Identities = 76/141 (53%), Positives = 96/141 (68%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT PE+RFD +TRL +F PIALVSLVD DRQWFKS GL +T R SFCA
Sbjct: 20 LHILDTLPEERFDRLTRLAKRLFGVPIALVSLVDADRQWFKSCVGLEASETSRDVSFCAH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L + E+L+V + L D RF +NPLV +P IRFYAGCPL NG +LG+LC+ID KPR
Sbjct: 80 AILGD--EILMVPDTLADERFHDNPLVTDNPSIRFYAGCPLTVPNGSKLGTLCLIDTKPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
D E +L ++A M +E+
Sbjct: 138 GLDEEERQLLRDLARMAEQEL 158
[16][TOP]
>UniRef100_A2VQK9 Diguanylate cyclase (GGDEF domain) n=1 Tax=Burkholderia cenocepacia
PC184 RepID=A2VQK9_9BURK
Length = 335
Score = 149 bits (375), Expect = 1e-34
Identities = 76/141 (53%), Positives = 98/141 (69%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT PE+RFD +TRL +F PIALVSLVD++RQWFKS GL QT R SFCA
Sbjct: 32 LSILDTPPEERFDRLTRLARRLFDVPIALVSLVDENRQWFKSHAGLDATQTPRDVSFCAH 91
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
LL + +V+++AL D RF +NPLV G+P IRFYAG PL A NG +G+LC+ID +PR
Sbjct: 92 ALLSG--DTMVIQDALNDDRFHDNPLVTGTPGIRFYAGRPLTAPNGAPVGTLCLIDTRPR 149
Query: 367 QFDAESCNMLANMAEMVVREI 429
+A+ +L ++A M REI
Sbjct: 150 SLEADELALLGDLAHMTEREI 170
[17][TOP]
>UniRef100_A4U3H0 Sensor protein n=1 Tax=Magnetospirillum gryphiswaldense
RepID=A4U3H0_9PROT
Length = 1382
Score = 148 bits (374), Expect = 2e-34
Identities = 78/152 (51%), Positives = 103/152 (67%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+LGVLDT+ E+RFD ITR+ F IALVSLVD DRQWFKS QG+ +T R SFC
Sbjct: 19 RLGVLDTQAEERFDRITRIAKTHFGVAIALVSLVDADRQWFKSCQGIDASETPRNISFCG 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+L E EV VV NA+E F +NPLV+G P+IRFYAG PL A +G R+G+LC+ID KP
Sbjct: 79 HAILRE--EVFVVTNAIEHPDFADNPLVIGPPNIRFYAGAPLHAPDGERVGTLCVIDPKP 136
Query: 364 RQFDAESCNMLANMAEMVVREIEKDKLIEAQK 459
R F AE ++L ++A V E+ + ++++
Sbjct: 137 RDFSAEDSDVLRDLANCVEGELSLTHIRKSER 168
[18][TOP]
>UniRef100_Q2BQ10 Diguanylate cyclase, putative n=1 Tax=Neptuniibacter caesariensis
RepID=Q2BQ10_9GAMM
Length = 327
Score = 148 bits (373), Expect = 3e-34
Identities = 75/153 (49%), Positives = 99/153 (64%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L +LDT E+RFD +TRL +F PIALVSLVD +RQWFKS GL +T R SFC
Sbjct: 25 RLNILDTASEERFDRLTRLAQRIFDVPIALVSLVDTNRQWFKSCMGLDASETGRDISFCG 84
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+L + +V V+ NAL+D RF +NPLV +PHIRFYAGCPL G RLG+LC+ID KP
Sbjct: 85 HAILDD--QVFVINNALQDPRFADNPLVTDAPHIRFYAGCPLRDVGGQRLGTLCLIDTKP 142
Query: 364 RQFDAESCNMLANMAEMVVREIEKDKLIEAQKI 462
R F + L ++A M +E+ +L ++
Sbjct: 143 RDFSHDDVIALKDLAAMAEQELAAVQLATTDEL 175
[19][TOP]
>UniRef100_C4T4E6 Diguanylate cyclase (GGDEF domain) n=1 Tax=Yersinia intermedia ATCC
29909 RepID=C4T4E6_YERIN
Length = 330
Score = 148 bits (373), Expect = 3e-34
Identities = 75/139 (53%), Positives = 97/139 (69%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE+RFD ITRL +F PIAL+S+VD +RQWFKS GL +T R SFC +
Sbjct: 24 ILDTSPEERFDRITRLAKRLFDVPIALISIVDVNRQWFKSHPGLVTSETPRDISFCGHAI 83
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + ++L+V NAL+DIRF +NPLV P IRFYAGCPLV NG +LG+LC+ID KPR
Sbjct: 84 LGD--DILLVPNALDDIRFSDNPLVTDDPGIRFYAGCPLVVPNGSKLGTLCLIDLKPRIL 141
Query: 373 DAESCNMLANMAEMVVREI 429
D +L ++A+M +EI
Sbjct: 142 DEYDQQLLCDLAKMAEQEI 160
[20][TOP]
>UniRef100_B1G7L8 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia graminis
C4D1M RepID=B1G7L8_9BURK
Length = 326
Score = 148 bits (373), Expect = 3e-34
Identities = 75/141 (53%), Positives = 97/141 (68%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT PE+RFD +TRL +F PIALVSLVD +RQWFKS GL +T R SFCA
Sbjct: 20 LHILDTPPEERFDRLTRLAKRLFGVPIALVSLVDANRQWFKSCVGLTASETSRDVSFCAH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L + ++L V + L D RF +NPLV +P+IRFYAGCPL NG RLG+LC+ID KPR
Sbjct: 80 AILDD--DILAVPDTLADERFHDNPLVTEAPNIRFYAGCPLTVPNGSRLGTLCLIDVKPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
+ D E +L ++A M +E+
Sbjct: 138 ELDDEERELLRDLARMAEQEL 158
[21][TOP]
>UniRef100_B4E8Q7 Putative cyclic-di-GMP signaling protein n=1 Tax=Burkholderia
cenocepacia J2315 RepID=B4E8Q7_BURCJ
Length = 323
Score = 147 bits (371), Expect = 4e-34
Identities = 75/141 (53%), Positives = 97/141 (68%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT PE+RFD +TRL +F PIALVSLVD++RQWFKS GL QT R SFCA
Sbjct: 20 LSILDTPPEERFDRLTRLARRLFDVPIALVSLVDENRQWFKSRAGLDATQTPRDVSFCAH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
LL + +V+++AL D RF +NPLV G+P IRFYAG PL A NG +G+LC+ID +PR
Sbjct: 80 ALLAG--DTMVIQDALNDDRFHDNPLVTGAPGIRFYAGRPLTAPNGAPIGTLCLIDTRPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
+ + +L ++A M REI
Sbjct: 138 SLEPDELALLGDLAHMTEREI 158
[22][TOP]
>UniRef100_A6F4L6 Sensor protein n=1 Tax=Marinobacter algicola DG893
RepID=A6F4L6_9ALTE
Length = 815
Score = 146 bits (369), Expect = 7e-34
Identities = 82/167 (49%), Positives = 104/167 (62%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE+RFD TR+ L F PIALVSLVD RQWFKS QGL R+T R SFC +
Sbjct: 22 LLDTSPEERFDRFTRMAKLAFGVPIALVSLVDDKRQWFKSCQGLEARETPRDISFCGHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + + +VE+ ED RF +NPLV G PHIRFYAG L + +G RLG+LCIID +PR
Sbjct: 82 LSD--RLFIVEDTHEDSRFADNPLVTGPPHIRFYAGAQLHSHDGYRLGTLCIIDTRPRTL 139
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQLIRALD 513
D + +L +A V EI EA K + E L E +++ AL+
Sbjct: 140 DHDQRVLLEELARCVDEEIND---FEASKSRQEQL--EKTRILSALN 181
[23][TOP]
>UniRef100_UPI00003839DD COG2203: FOG: GAF domain n=1 Tax=Magnetospirillum magnetotacticum
MS-1 RepID=UPI00003839DD
Length = 311
Score = 145 bits (365), Expect = 2e-33
Identities = 75/141 (53%), Positives = 97/141 (68%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
+GVLDT+ E+RFD ITR+ F IALVSLVD DRQWFKS QG+ +T R SFC
Sbjct: 1 MGVLDTQAEERFDRITRIAKTHFGVAIALVSLVDADRQWFKSCQGIDASETPRNISFCGH 60
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L E E+ VV NA+E F +NPLV+G P+IRFYAG PL A +G R+G+LC+ID +PR
Sbjct: 61 AILRE--EIFVVTNAIEHPDFADNPLVIGPPNIRFYAGAPLHAPDGERVGTLCVIDPRPR 118
Query: 367 QFDAESCNMLANMAEMVVREI 429
F AE ++L ++A V E+
Sbjct: 119 DFSAEDSDVLRDLANCVEGEL 139
[24][TOP]
>UniRef100_A3D450 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella baltica
OS155 RepID=A3D450_SHEB5
Length = 321
Score = 145 bits (365), Expect = 2e-33
Identities = 77/141 (54%), Positives = 96/141 (68%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT E+RFD +TR+ +F PIALVSLVD++RQWFKS GL V +T+R SFC
Sbjct: 20 LAILDTPSEERFDCVTRMAKRLFGVPIALVSLVDENRQWFKSCFGLDVSETERSISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L + LV+ +A D RF +NPLV+G P+IRFYAG PL +G LG+LCIID PR
Sbjct: 80 AIL--NKSALVINDATLDERFFDNPLVIGEPYIRFYAGQPLRTLSGQGLGTLCIIDQTPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
F E MLAN+A MV REI
Sbjct: 138 DFSDEDITMLANLAGMVEREI 158
[25][TOP]
>UniRef100_Q07Y18 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella
frigidimarina NCIMB 400 RepID=Q07Y18_SHEFN
Length = 327
Score = 144 bits (364), Expect = 3e-33
Identities = 74/141 (52%), Positives = 99/141 (70%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L VLDT E+RFD ITRL +F I++VSL+D +RQWFKSVQGL + +T R SFC
Sbjct: 20 LNVLDTIAEERFDRITRLAKRLFSVSISVVSLIDSERQWFKSVQGLDICETQRDISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ +H VLVV +AL+D RF +NPLVL +P+IRFYAG PL NG+R+G+LCIID+KPR
Sbjct: 80 AINQQH--VLVVPDALKDERFADNPLVLAAPNIRFYAGYPLTMPNGVRVGTLCIIDDKPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
F + L ++ ++V E+
Sbjct: 138 SFSKDDEAALEDLGKIVAEEL 158
[26][TOP]
>UniRef100_C9PLR8 Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1
Tax=Vibrio furnissii CIP 102972 RepID=C9PLR8_VIBFU
Length = 1097
Score = 144 bits (364), Expect = 3e-33
Identities = 76/152 (50%), Positives = 97/152 (63%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+ +LDT EKRFD ITRL VFK PI L+SLVD DRQWFKS GL +T R SFC
Sbjct: 19 RTNLLDTPAEKRFDRITRLAASVFKVPICLISLVDSDRQWFKSKVGLDACETGRDISFCG 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+L H ++L+V +A +D RF +NPLV +PHIRFYAG PL T+G +G+LC+ID+
Sbjct: 79 HAIL--HEDILIVSDATKDERFSSNPLVTHAPHIRFYAGAPLRETSGQPIGTLCLIDSVA 136
Query: 364 RQFDAESCNMLANMAEMVVREIEKDKLIEAQK 459
R F A+ L A+MV EI K+ Q+
Sbjct: 137 RDFSAKEQQELREFADMVEYEIAKEDQARLQE 168
[27][TOP]
>UniRef100_C9PIE2 GGDEF domain protein n=1 Tax=Vibrio furnissii CIP 102972
RepID=C9PIE2_VIBFU
Length = 324
Score = 144 bits (364), Expect = 3e-33
Identities = 73/142 (51%), Positives = 98/142 (69%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
KLG+LD+ PE+RFD +TRL +F PIALV+LVD+ RQWFKS GL V +T R SFC
Sbjct: 19 KLGILDSAPEERFDRVTRLARRLFDVPIALVTLVDEKRQWFKSSFGLNVSETPRDISFCG 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+L + P ++ NA+ D RF +NPLV +PHIRFYAG PLV +G +LG+LCIID +P
Sbjct: 79 HAILGDEP--FIINNAVADERFADNPLVTDNPHIRFYAGVPLVFQDGSKLGTLCIIDTEP 136
Query: 364 RQFDAESCNMLANMAEMVVREI 429
R + + L ++A+M RE+
Sbjct: 137 RNLNHDEIIDLLDLAKMAEREL 158
[28][TOP]
>UniRef100_Q3KE87 Putative GGDEF/GAF domain sensory box protein n=1 Tax=Pseudomonas
fluorescens Pf0-1 RepID=Q3KE87_PSEPF
Length = 321
Score = 144 bits (363), Expect = 4e-33
Identities = 73/141 (51%), Positives = 98/141 (69%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT PE+RFD +TRL +F PIALV+LVDK+RQWFKS GL +T R SFCA
Sbjct: 20 LKLLDTAPEERFDRLTRLAKRLFNVPIALVTLVDKERQWFKSCVGLDTTETPRSVSFCAH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L + E+++V +A ED RF +NPLV G P+IRFYAG PL +G ++G+LC+ID KPR
Sbjct: 80 AILRD--ELMLVPDAREDERFHDNPLVTGEPNIRFYAGYPLTVPSGNKMGTLCLIDTKPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
D E +L ++A M +E+
Sbjct: 138 DLDEEERALLRDLAGMAEQEL 158
[29][TOP]
>UniRef100_C0QFX2 Two-component hybrid protein, sensory box hisitidine
kinase/adenylate cyclase n=1 Tax=Desulfobacterium
autotrophicum HRM2 RepID=C0QFX2_DESAH
Length = 378
Score = 144 bits (363), Expect = 4e-33
Identities = 78/167 (46%), Positives = 103/167 (61%), Gaps = 1/167 (0%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE +DD+TRL + PI L+SLVD DRQWFKS GL V +T R +FCA +
Sbjct: 21 ILDTAPESAYDDLTRLASHICGVPICLISLVDSDRQWFKSKIGLNVEETPRDQAFCAHAI 80
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L P++++V +A D RF +NPLVL P IRFYAG PL+ G LG+LC+ID KPR+
Sbjct: 81 L--EPDIMIVPDATLDSRFFDNPLVLKDPRIRFYAGAPLITPRGNELGTLCVIDQKPRKL 138
Query: 373 DAESCNMLANMAEMVVREIEKDKL-IEAQKIKSEMLYRENNQLIRAL 510
E +L +A VV +IE + IE +K + NN L+R L
Sbjct: 139 TVEQVELLGILARQVVTQIELRRTGIELRKAWED----SNNLLLRVL 181
[30][TOP]
>UniRef100_B2J3P7 Diguanylate cyclase with GAF sensor n=1 Tax=Nostoc punctiforme PCC
73102 RepID=B2J3P7_NOSP7
Length = 406
Score = 144 bits (363), Expect = 4e-33
Identities = 72/150 (48%), Positives = 100/150 (66%), Gaps = 1/150 (0%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE+ FDD+T + + K PIAL+SLVD DRQWFKS GL VR+T R+S+FC+ +
Sbjct: 88 ILDTLPEQAFDDLTAIAAYICKTPIALISLVDADRQWFKSNIGLKVRETPRESAFCSHAI 147
Query: 193 LPEHPE-VLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
L HPE +LV+ NA++D RF NNPLV + IRFYAG PLV NG +G+LC++D PRQ
Sbjct: 148 L--HPENILVIPNAMKDDRFANNPLVKSNSKIRFYAGAPLVTPNGFPIGTLCVMDTVPRQ 205
Query: 370 FDAESCNMLANMAEMVVREIEKDKLIEAQK 459
+ + L + + ++E + I +K
Sbjct: 206 LSYQQLDALRRLTRQAIAQMELIQEIRNRK 235
[31][TOP]
>UniRef100_C9NSQ2 GGDEF domain protein n=1 Tax=Vibrio coralliilyticus ATCC BAA-450
RepID=C9NSQ2_9VIBR
Length = 319
Score = 143 bits (360), Expect = 8e-33
Identities = 72/142 (50%), Positives = 97/142 (68%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDTEPE+RFD +TR+ +F PIA+VSLVD RQWFKS GLPVR+T R SFC
Sbjct: 20 LDILDTEPEERFDRVTRIAKHLFDVPIAVVSLVDNHRQWFKSCIGLPVRETARNVSFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ + P ++ +A +D RF +NPLV+G P IRFYAG PLV N +LG+LCIID KPR
Sbjct: 80 VINDDGP--FIINDATKDPRFLDNPLVMGEPFIRFYAGVPLVYHNQSKLGTLCIIDTKPR 137
Query: 367 QFDAESCNMLANMAEMVVREIE 432
+ + L ++A++ +E+E
Sbjct: 138 ELTMQQMADLVDLAKVAEQELE 159
[32][TOP]
>UniRef100_Q5WSQ0 Putative uncharacterized protein n=1 Tax=Legionella pneumophila
str. Lens RepID=Q5WSQ0_LEGPL
Length = 314
Score = 142 bits (359), Expect = 1e-32
Identities = 66/143 (46%), Positives = 100/143 (69%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
KL +LDTE E+RFD ITR+ C +F PIA++S ++ +RQW KS +G +++ RK+SFC
Sbjct: 19 KLQILDTEREERFDRITRIACRLFGIPIAVISFLEAERQWMKSTEGFDIKEAKRKTSFCG 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+L + E++V+E+A +D RF +NP VLG P+ RFYAGCPL N +G +C+ID+KP
Sbjct: 79 HVILSD--EIMVIEDATKDKRFHDNPFVLGKPYFRFYAGCPL-KINKYNVGVICLIDDKP 135
Query: 364 RQFDAESCNMLANMAEMVVREIE 432
R + N++ ++A+MV E+E
Sbjct: 136 RSINDSDKNVINDLAQMVEMELE 158
[33][TOP]
>UniRef100_Q0HYE2 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella sp. MR-7
RepID=Q0HYE2_SHESR
Length = 323
Score = 141 bits (355), Expect = 3e-32
Identities = 71/141 (50%), Positives = 95/141 (67%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDTE E+RFD ITRL +F PI LV+LVD +RQWFKS QGL V +T R SFCA
Sbjct: 20 LNILDTEAEERFDRITRLTRRIFALPICLVTLVDANRQWFKSRQGLEVTETSRDISFCAH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ H V ++ +AL+D RF +NPLV+ PHIRFYAG PL R+G+LC+I ++PR
Sbjct: 80 AI--NHSGVFIINDALKDPRFCDNPLVIEPPHIRFYAGYPLTIHGEYRVGTLCLIGSEPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
+F A+ L ++ +MV E+
Sbjct: 138 EFSADDIETLTDLGQMVEAEL 158
[34][TOP]
>UniRef100_B5IIP1 GAF sensor diguanylate cyclase n=1 Tax=Cyanobium sp. PCC 7001
RepID=B5IIP1_9CHRO
Length = 364
Score = 141 bits (355), Expect = 3e-32
Identities = 77/174 (44%), Positives = 109/174 (62%), Gaps = 5/174 (2%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+ GVLD+ + FD + RL V + PIAL+SL+DK+RQWF + GL + +T R+ +FCA
Sbjct: 20 RYGVLDSPDDTHFDRLVRLASTVLETPIALISLIDKNRQWFLARHGLDITETPREQAFCA 79
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
T+ P LVV +A D RF +NPLVLG P +RFYAG PL + +G LGSLC+ID +P
Sbjct: 80 HTITEGEP--LVVPDARTDPRFCSNPLVLGEPGVRFYAGAPLASPDGHNLGSLCVIDRQP 137
Query: 364 RQFDAESCNMLANMAEMVVREIE---KDKLIEAQKIKSEMLYRENNQ--LIRAL 510
R+ A +L ++A++VVRE+E + L + + M + E Q L RAL
Sbjct: 138 RRLSAAQVKLLQDLADLVVRELELRRQTSLCPLTGLANRMSFLEQGQRELDRAL 191
[35][TOP]
>UniRef100_A3VSH9 FOG: GGDEF domain protein n=1 Tax=Parvularcula bermudensis HTCC2503
RepID=A3VSH9_9PROT
Length = 388
Score = 140 bits (354), Expect = 4e-32
Identities = 71/173 (41%), Positives = 106/173 (61%), Gaps = 10/173 (5%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+ G+LDT PE+ FD R+ P+ALVSLVD RQWFK+ G+ +T R+ +FCA
Sbjct: 17 RTGILDTPPEETFDRFCRIAANAIDVPVALVSLVDDHRQWFKARLGIDDPETPREIAFCA 76
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+ + P LVVENALED RFR+NPLV G H+RFYAG P++ + G RLG++C++D P
Sbjct: 77 HAIQNDDP--LVVENALEDPRFRSNPLVTGDTHVRFYAGAPIILSGGYRLGTVCVLDTNP 134
Query: 364 RQFDAESCNMLANMAEMVVREI----------EKDKLIEAQKIKSEMLYRENN 492
RQ +L ++A + RE+ E+ ++ E + + +E++ +E N
Sbjct: 135 RQISEGQRQILVDLAGLAARELEIRAGAAFAEERREIAEERAMSAELVAKEMN 187
[36][TOP]
>UniRef100_B0SII8 Sensor protein n=2 Tax=Leptospira biflexa serovar Patoc
RepID=B0SII8_LEPBA
Length = 553
Score = 140 bits (352), Expect = 7e-32
Identities = 72/171 (42%), Positives = 108/171 (63%), Gaps = 3/171 (1%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT E+ FD+IT+L ++ PI+LVSL+D+ RQWFKS GL R+T R +FC+
Sbjct: 20 LEILDTPEEEMFDEITKLASMICHAPISLVSLIDETRQWFKSHHGLKARETPRSLAFCSH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L + E+ ++ NA D RF+NNPLV G P++ FYAG PL + ++LG+LC+IDNKPR
Sbjct: 80 AILGD--ELFIIPNAKSDNRFKNNPLVNGDPNVIFYAGIPLALDDQIKLGTLCVIDNKPR 137
Query: 367 QFDAESCNMLANMAEMVVR--EIEKDK-LIEAQKIKSEMLYRENNQLIRAL 510
+ + E ML + + VR ++ KD+ +E +K +E I A+
Sbjct: 138 ELNEEQMQMLRLLGKQTVRLLQMRKDRDKLEIEKKSAERATAAKRDFIAAI 188
[37][TOP]
>UniRef100_A3YZB7 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 5701
RepID=A3YZB7_9SYNE
Length = 337
Score = 140 bits (352), Expect = 7e-32
Identities = 72/140 (51%), Positives = 95/140 (67%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LD + FD I +L +F PIAL+SLVD DRQWF S +GL V +T R+ +FCA T+
Sbjct: 31 LLDHAGDHHFDRIAKLASAIFDMPIALISLVDHDRQWFLSREGLEVSETPREVAFCAHTI 90
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
+ EV+VV +AL+D RF +NPLVL P IRFYAG PL +G LG+LC+ID KPR+F
Sbjct: 91 ATD--EVMVVPDALQDERFSSNPLVLSPPGIRFYAGAPLRTKDGHNLGTLCVIDQKPREF 148
Query: 373 DAESCNMLANMAEMVVREIE 432
E L +A++V+REIE
Sbjct: 149 SPEQKQQLRMLADLVMREIE 168
[38][TOP]
>UniRef100_C6XJK2 Sensor protein n=1 Tax=Hirschia baltica ATCC 49814
RepID=C6XJK2_HIRBI
Length = 814
Score = 139 bits (351), Expect = 9e-32
Identities = 75/156 (48%), Positives = 104/156 (66%), Gaps = 5/156 (3%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLP-VRQTDRKSSFCA 183
L +LDT+PE ++D++T L +F PIALVSLVD++RQWFKS GL V +T R SFC
Sbjct: 17 LKILDTKPEAQYDNVTALAAEMFDVPIALVSLVDENRQWFKSNCGLDGVTETARDISFCQ 76
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+ + V+VVENA+ED ++ NPLVLG P IRFYAG PL+ G LG+LC+ID KP
Sbjct: 77 HAI--KSTNVMVVENAIEDEKYDQNPLVLGEPSIRFYAGAPLITEEGHALGTLCLIDRKP 134
Query: 364 RQFDAESCNMLANMA----EMVVREIEKDKLIEAQK 459
R+F A+ +L +A +M+V+ + ++IE K
Sbjct: 135 RKFSAQEQALLVRLATTIRDMIVKNTLEHEIIELAK 170
[39][TOP]
>UniRef100_C1XPI5 Diguanylate cyclase (GGDEF) domain-containing protein n=1
Tax=Meiothermus silvanus DSM 9946 RepID=C1XPI5_9DEIN
Length = 343
Score = 139 bits (351), Expect = 9e-32
Identities = 69/162 (42%), Positives = 103/162 (63%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE +DD+ L + + PIAL+S +D+ RQWFKS QGL + + R++SFCA +
Sbjct: 21 ILDTLPESAYDDLALLAAHIGRTPIALISFIDRQRQWFKSAQGLEIHEIPREASFCAHAI 80
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L V VV +A +D RF ++PLV+G P IRFYAG PL+ NG LG++C++D +PRQ
Sbjct: 81 LQHG--VTVVSDAWQDERFADHPLVVGEPKIRFYAGAPLITPNGEALGTVCVMDRQPRQM 138
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQL 498
+ E LA +A V+ ++E + I ++ E+L N +L
Sbjct: 139 EEEEQKALAALARQVMAQLELRREIRERQRYQELLEEANARL 180
[40][TOP]
>UniRef100_Q7U978 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 8102
RepID=Q7U978_SYNPX
Length = 239
Score = 139 bits (350), Expect = 1e-31
Identities = 73/163 (44%), Positives = 104/163 (63%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+L T+PE+ +DDIT + V PIAL+SL+D DRQWFKS G+ +++T R SFCA +
Sbjct: 22 ILGTKPEQSYDDITNIASSVCSTPIALLSLIDTDRQWFKSKVGVEIQETPRDWSFCAHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
P L++ +AL D RFR+NPLV G P+IR YAG PL + LR+G+LC+ID PRQ
Sbjct: 82 HSSDP--LIIPDALMDDRFRDNPLVCGDPNIRLYAGFPLENSKALRVGTLCVIDRVPRQL 139
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQLI 501
+ + C ++ +A VV +E K I+S + ENN++I
Sbjct: 140 NDKECGVMKALARQVVSFLELRKK-SINLIESFCAHTENNRMI 181
[41][TOP]
>UniRef100_B4VUP4 Sensor protein n=1 Tax=Microcoleus chthonoplastes PCC 7420
RepID=B4VUP4_9CYAN
Length = 1038
Score = 139 bits (350), Expect = 1e-31
Identities = 70/160 (43%), Positives = 98/160 (61%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PEK FDD+T++ + PIAL+SL+D RQWFKS G+ QT ++ +FCA +
Sbjct: 74 ILDTLPEKAFDDLTKMAAYICDAPIALISLLDATRQWFKSKVGIDATQTPKEQAFCAHAI 133
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L +VL+V NAL+D RF NPLV P+IRFYAG PLV +G LG+LC+ID PRQ
Sbjct: 134 L-NPDQVLMVPNALDDERFAQNPLVTSEPNIRFYAGTPLVTPDGFALGTLCVIDQVPRQL 192
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENN 492
E L + V+ +IE ++ + + + L + N
Sbjct: 193 TPEQIEALEALGRQVIAQIELRLNVDKLERQMQALQKAEN 232
[42][TOP]
>UniRef100_A3ETZ5 Diguanylate cyclase with GAF sensor n=1 Tax=Leptospirillum rubarum
RepID=A3ETZ5_9BACT
Length = 322
Score = 139 bits (350), Expect = 1e-31
Identities = 69/146 (47%), Positives = 96/146 (65%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT PE+RFD +TR+ +F PIALV+LVDKDRQWFKS GL V +T R SFC
Sbjct: 20 LDILDTPPEERFDRLTRMARRLFNVPIALVTLVDKDRQWFKSNMGLSVGETPRSVSFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L E + ++ +A ED RF +NPLVLG P IRFYAGC L + ++G+LC+ID+KPR
Sbjct: 80 AILQE--DFFIIPDAREDPRFSDNPLVLGDPRIRFYAGCVLRTRDNQKIGTLCLIDHKPR 137
Query: 367 QFDAESCNMLANMAEMVVREIEKDKL 444
+ + +L ++ + +E K+
Sbjct: 138 TMETQDLLVLEDLTALAEQEFSALKM 163
[43][TOP]
>UniRef100_B8EE24 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella baltica
OS223 RepID=B8EE24_SHEB2
Length = 323
Score = 139 bits (349), Expect = 2e-31
Identities = 70/141 (49%), Positives = 93/141 (65%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L VLDT+ E+RFD ITRL +F PI +V+LVD +RQWFKS QGL V +T R+ SFC
Sbjct: 20 LNVLDTDAEERFDRITRLTRRIFSLPICVVTLVDAERQWFKSRQGLEVTETPREISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ ++ +V +AL+D RF +NPLV PHIRFYAG PL R+G+LC+I +PR
Sbjct: 80 AI--NQDDIFIVNDALKDPRFSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
+F AE L ++ EMV E+
Sbjct: 138 EFTAEDIETLTDLGEMVEAEL 158
[44][TOP]
>UniRef100_A4VFL1 Sensor protein n=1 Tax=Pseudomonas stutzeri A1501
RepID=A4VFL1_PSEU5
Length = 793
Score = 139 bits (349), Expect = 2e-31
Identities = 71/144 (49%), Positives = 92/144 (63%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT E FDD T L + PIAL+SLVD RQWFKS GL V +T R SFC +T+
Sbjct: 21 ILDTPEESAFDDFTALAAQMCDTPIALISLVDDRRQWFKSRVGLDVSETPRDISFCTYTI 80
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
E ++ V +AL+D RFR+NPLV G PHIRFYAG PL + +G LG+LC+ID KPR+
Sbjct: 81 TGE--QIFEVPDALQDPRFRDNPLVQGDPHIRFYAGTPLTSPDGHNLGTLCVIDRKPRRL 138
Query: 373 DAESCNMLANMAEMVVREIEKDKL 444
+E +L + V+R E+ L
Sbjct: 139 SSEQREILERLGRQVIRLFEQHLL 162
[45][TOP]
>UniRef100_A3D858 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella baltica
OS155 RepID=A3D858_SHEB5
Length = 323
Score = 139 bits (349), Expect = 2e-31
Identities = 70/141 (49%), Positives = 93/141 (65%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L VLDT+ E+RFD ITRL +F PI +V+LVD +RQWFKS QGL V +T R+ SFC
Sbjct: 20 LNVLDTDAEERFDRITRLTRRIFSLPICVVTLVDAERQWFKSRQGLEVTETPREISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ ++ +V +AL+D RF +NPLV PHIRFYAG PL R+G+LC+I +PR
Sbjct: 80 AI--NQDDIFIVNDALKDPRFSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
+F AE L ++ EMV E+
Sbjct: 138 EFTAEDIETLTDLGEMVEAEL 158
[46][TOP]
>UniRef100_A1SVH2 Diguanylate cyclase with GAF sensor n=1 Tax=Psychromonas ingrahamii
37 RepID=A1SVH2_PSYIN
Length = 316
Score = 139 bits (349), Expect = 2e-31
Identities = 70/141 (49%), Positives = 94/141 (66%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L VLDT E+RFD +TRL +F PIALVSLVD++RQWFKS G+ V + R SFC
Sbjct: 20 LDVLDTPSEERFDRLTRLAKRMFDVPIALVSLVDENRQWFKSCTGINVSEIPRDISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L E+ ++ + ++D RF +NPLVL P+IRFYAGCPL +G LG+LCIID +PR
Sbjct: 80 AILEN--EIFIIPDTIKDERFSDNPLVLNEPYIRFYAGCPLRYLDGSTLGTLCIIDTQPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
D E + L ++AE+ E+
Sbjct: 138 VLDEEDLDALKDLAELAEHEL 158
[47][TOP]
>UniRef100_B8BRK9 Putative uncharacterized protein (Fragment) n=1 Tax=Thalassiosira
pseudonana CCMP1335 RepID=B8BRK9_THAPS
Length = 164
Score = 139 bits (349), Expect = 2e-31
Identities = 79/147 (53%), Positives = 101/147 (68%), Gaps = 7/147 (4%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLP-VRQTDRKSSFCAW 186
G+LD+EPE+RFD ITRL +F PIALVSLVD+DRQWFKS GL V +T R +FCA
Sbjct: 18 GLLDSEPEERFDRITRLAKAMFNVPIALVSLVDEDRQWFKSSCGLSGVAETPRDHAFCAH 77
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVA--TNG----LRLGSLCI 348
+L + ++ VV +AL+D RF +NPLV+G+P++RFYAG PL NG + LGSLC+
Sbjct: 78 AIL--NDDLFVVPDALQDERFADNPLVVGAPNVRFYAGYPLKTPMLNGDGSQVTLGSLCV 135
Query: 349 IDNKPRQFDAESCNMLANMAEMVVREI 429
ID+KPR E N L + MV REI
Sbjct: 136 IDSKPRDLRLEERNALRDFGAMVEREI 162
[48][TOP]
>UniRef100_B7S3A7 Sensor protein n=1 Tax=marine gamma proteobacterium HTCC2148
RepID=B7S3A7_9GAMM
Length = 552
Score = 138 bits (348), Expect = 2e-31
Identities = 76/158 (48%), Positives = 99/158 (62%), Gaps = 2/158 (1%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE+ FDDIT L V + PIALVSLVDK RQWFKS GL T R SFC +
Sbjct: 22 ILDTSPEQAFDDITMLASQVCETPIALVSLVDKHRQWFKSRAGLEATDTHRDLSFCGHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + E+ VVE+AL+D RF NNPLVL P+IRFYAG PL G +G+LC+ID PR+
Sbjct: 82 LRD--EIFVVEDALKDSRFINNPLVLDHPNIRFYAGAPLKTPAGENIGTLCVIDTIPRKL 139
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQ--KIKSEMLY 480
N L ++ V+ +IE ++ K++S+ L+
Sbjct: 140 TEAQKNSLVALSRQVIAQIELRFALQNANLKVRSKALF 177
[49][TOP]
>UniRef100_Q8D4I0 FOG: GGDEF domain n=1 Tax=Vibrio vulnificus RepID=Q8D4I0_VIBVU
Length = 322
Score = 138 bits (347), Expect = 3e-31
Identities = 72/141 (51%), Positives = 94/141 (66%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT E+RFD +TR+ +F PIALVSLVD+DRQWFKS GL +T R SFC
Sbjct: 20 LNILDTAAEERFDRVTRIARRLFDVPIALVSLVDEDRQWFKSCFGLNASETPRDISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L + L+VE+A +D RF +NPLV G PHIRFYAG PL+ + LG+LCIID KPR
Sbjct: 80 AILGA--DTLIVEDASQDARFADNPLVTGEPHIRFYAGVPLMFEHSSCLGTLCIIDTKPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
+ + L ++A+M RE+
Sbjct: 138 TLNEDERLDLIDLAKMAEREL 158
[50][TOP]
>UniRef100_Q7MG14 GGDEF family protein n=1 Tax=Vibrio vulnificus YJ016
RepID=Q7MG14_VIBVY
Length = 322
Score = 138 bits (347), Expect = 3e-31
Identities = 72/141 (51%), Positives = 94/141 (66%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT E+RFD +TR+ +F PIALVSLVD+DRQWFKS GL +T R SFC
Sbjct: 20 LNILDTAAEERFDRVTRIARRLFDVPIALVSLVDEDRQWFKSCFGLNASETPRDISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L + L+VE+A +D RF +NPLV G PHIRFYAG PL+ + LG+LCIID KPR
Sbjct: 80 AILGA--DTLIVEDASQDARFADNPLVTGEPHIRFYAGVPLMFEHSSCLGTLCIIDTKPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
+ + L ++A+M RE+
Sbjct: 138 TLNEDERLDLIDLAKMAEREL 158
[51][TOP]
>UniRef100_Q0HFI8 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella sp. MR-4
RepID=Q0HFI8_SHESM
Length = 323
Score = 138 bits (347), Expect = 3e-31
Identities = 71/141 (50%), Positives = 93/141 (65%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L VLDT+ E+RFD ITRL +F PI +V+LVD +RQWFKS QGL V +T R SFCA
Sbjct: 20 LNVLDTDAEERFDRITRLTRRIFALPICVVTLVDANRQWFKSRQGLEVTETPRDISFCAH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ H V +V +AL+D RF +NPLV PHIRFYAG PL R+G+LC+I N+PR
Sbjct: 80 AI--NHDGVFIVNDALKDPRFFDNPLVTEPPHIRFYAGYPLTIQGEYRVGTLCLIGNEPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
+F + L ++ +MV E+
Sbjct: 138 EFSDDDIETLTDLGQMVEAEL 158
[52][TOP]
>UniRef100_A9L2M2 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella baltica
OS195 RepID=A9L2M2_SHEB9
Length = 323
Score = 138 bits (347), Expect = 3e-31
Identities = 70/141 (49%), Positives = 93/141 (65%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L VLDT+ E+RFD ITRL +F P +V+LVD +RQWFKS QGL V +T R+ SFC
Sbjct: 20 LNVLDTDAEERFDRITRLTRRIFSLPTCVVTLVDAERQWFKSRQGLEVTETPREISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ ++L+V +AL+D RF +NPLV PHIRFYAG PL R+G+LC+I +PR
Sbjct: 80 AI--NQGDILIVNDALKDPRFSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
+F AE L ++ EMV E+
Sbjct: 138 EFTAEDIETLTDLGEMVEAEL 158
[53][TOP]
>UniRef100_A6WJQ9 Diguanylate cyclase n=1 Tax=Shewanella baltica OS185
RepID=A6WJQ9_SHEB8
Length = 323
Score = 138 bits (347), Expect = 3e-31
Identities = 70/141 (49%), Positives = 92/141 (65%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L VLDT+ E+RFD ITRL +F PI +V+LVD +RQWFKS QGL V +T R+ SFC
Sbjct: 20 LNVLDTDAEERFDRITRLTRRIFSLPICVVTLVDAERQWFKSRQGLEVTETPREISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ ++ +V +AL+D RF +NPLV PHIRFYAG PL R+G+LC+I +PR
Sbjct: 80 AI--NQDDIFIVNDALKDPRFSDNPLVTEQPHIRFYAGYPLTIHRQYRVGTLCLIGTEPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
F AE L ++ EMV E+
Sbjct: 138 DFTAEDIETLTDLGEMVEAEL 158
[54][TOP]
>UniRef100_C8QG55 Diguanylate cyclase with GAF sensor n=1 Tax=Pantoea sp. At-9b
RepID=C8QG55_9ENTR
Length = 322
Score = 138 bits (347), Expect = 3e-31
Identities = 68/141 (48%), Positives = 95/141 (67%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +L T E+RFD +TRL +F PIALVSL+++D QWFKS+ G R +SFC
Sbjct: 20 LNILHTPAEERFDRLTRLARRLFGVPIALVSLLEEDHQWFKSIAGQSGETAPRNTSFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L + +V+VVENAL+D RF +NPLV G +RFYAGCPL G ++G+LCI+D++ R
Sbjct: 80 AILQD--DVMVVENALDDDRFYDNPLVTGENPVRFYAGCPLRTPAGAKVGTLCIVDHQAR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
FDA+ C+ L ++A M E+
Sbjct: 138 SFDADDCHTLRDLAAMAEAEL 158
[55][TOP]
>UniRef100_C5AGJ9 Diguanylate cyclase n=1 Tax=Burkholderia glumae BGR1
RepID=C5AGJ9_BURGB
Length = 324
Score = 138 bits (347), Expect = 3e-31
Identities = 71/141 (50%), Positives = 93/141 (65%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT E+RFD I RL +F PIALVSL+D +RQWFKS GL R+T R SFCA
Sbjct: 20 LDLLDTPDEERFDRIARLARRIFDVPIALVSLIDANRQWFKSCFGLEARETSRDVSFCAH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L + + LV+ +A D RF NPLV G+P IRFYAG PL +G LG+LC+ID +PR
Sbjct: 80 AILSD--DTLVIPDATLDPRFAGNPLVTGAPGIRFYAGHPLALPDGTNLGTLCLIDTRPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
+ DA + L ++A + RE+
Sbjct: 138 EIDATDLSHLRDLANLAEREV 158
[56][TOP]
>UniRef100_C2HZG0 GGDEF domain protein n=1 Tax=Vibrio cholerae bv. albensis VL426
RepID=C2HZG0_VIBCH
Length = 351
Score = 138 bits (347), Expect = 3e-31
Identities = 72/141 (51%), Positives = 96/141 (68%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT E+RFD ITRL +F PIAL+SLVD++RQWFKS GL V +T R SFC
Sbjct: 47 LAILDTAAEERFDRITRLARRLFNVPIALISLVDENRQWFKSCYGLNVSETSRDISFCGH 106
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L + +V V+E+A +D RF +NPLV +P+IRFYAG PL+ + L LG+LCIID KPR
Sbjct: 107 AILGK--KVFVIEDASQDPRFADNPLVTDAPNIRFYAGVPLLYEDSLALGTLCIIDTKPR 164
Query: 367 QFDAESCNMLANMAEMVVREI 429
Q + ++A+M RE+
Sbjct: 165 QLTQDELLDFYDLAKMAEREL 185
[57][TOP]
>UniRef100_Q8EAY2 GGDEF domain protein n=1 Tax=Shewanella oneidensis
RepID=Q8EAY2_SHEON
Length = 324
Score = 137 bits (346), Expect = 3e-31
Identities = 69/141 (48%), Positives = 90/141 (63%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT E+RFD ITRL +F PI +V+LVD RQWFKS QGL V +T R SFC
Sbjct: 20 LNILDTNAEERFDRITRLTRRIFALPICVVTLVDASRQWFKSCQGLEVTETSRDISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ H + +V +A D RF +NPLV SPHIRFYAG PL R+G+LC+I N+PR
Sbjct: 80 AI--NHDGIFIVNDAQMDPRFHDNPLVTQSPHIRFYAGYPLTIRGEYRVGTLCLIGNEPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
+F A+ L ++ +MV E+
Sbjct: 138 EFSADDIETLTDLGQMVEAEL 158
[58][TOP]
>UniRef100_P73272 Slr1143 protein n=1 Tax=Synechocystis sp. PCC 6803
RepID=P73272_SYNY3
Length = 343
Score = 137 bits (346), Expect = 3e-31
Identities = 71/151 (47%), Positives = 100/151 (66%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L +LDT E+RF+ ITR+ C K PIA +S+VD+ RQWFKS+QGL +T R+ +FCA
Sbjct: 18 QLNILDTPIEERFERITRMVCRSLKVPIAAISIVDESRQWFKSIQGLNASETPREIAFCA 77
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+L + E+L+VE+A +D RF +NPLV P IRFYAG PL + +G+LC ID P
Sbjct: 78 HAILRD--ELLLVEDATQDERFADNPLVTDEPFIRFYAGYPLNLGQDIHVGTLCAIDRVP 135
Query: 364 RQFDAESCNMLANMAEMVVREIEKDKLIEAQ 456
R+ AE +L ++++MV E+ L EAQ
Sbjct: 136 RELSAEEQEILYDLSKMVESELAAIALSEAQ 166
[59][TOP]
>UniRef100_C3K9C6 Sensor protein n=1 Tax=Pseudomonas fluorescens SBW25
RepID=C3K9C6_PSEFS
Length = 437
Score = 137 bits (346), Expect = 3e-31
Identities = 73/160 (45%), Positives = 101/160 (63%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
LGVLD+ PEK FDDI L + + P+ALVSLVD+DRQWFK+ GL VR+T R +FCA
Sbjct: 22 LGVLDSAPEKEFDDIVVLASTLCEVPVALVSLVDRDRQWFKACVGLDVRETHRDLAFCAH 81
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L +VL VE+A D RF ++ LVLG P+IRFYAG P++ G LG++C+ID KPR
Sbjct: 82 AILAP-ADVLTVEDARRDPRFEHSALVLGPPYIRFYAGAPIIDDTGHALGTVCVIDTKPR 140
Query: 367 QFDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRE 486
A L +A ++ L ++ ++E+L +E
Sbjct: 141 TLTAPQRTALLALARQTASLLQLRLLRHQRERRAEILVQE 180
[60][TOP]
>UniRef100_B2JFQ6 Diguanylate cyclase with GAF sensor n=1 Tax=Burkholderia phymatum
STM815 RepID=B2JFQ6_BURP8
Length = 319
Score = 137 bits (345), Expect = 4e-31
Identities = 72/152 (47%), Positives = 97/152 (63%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT PE+RFD +TRL +F PIA V+LVD RQWFKS GL +T R SFC
Sbjct: 20 LHILDTPPEERFDRLTRLARRLFGVPIAAVTLVDSHRQWFKSHPGLEASETPRDVSFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ + ++ +V +A D+RF +NPLV G P+IRFYAG PL +NG RLG+LC+ID KPR
Sbjct: 80 AIADD--DLFLVNDASLDVRFADNPLVTGDPNIRFYAGYPLTVSNGSRLGTLCLIDVKPR 137
Query: 367 QFDAESCNMLANMAEMVVREIEKDKLIEAQKI 462
D E +L ++A M +EI +L ++
Sbjct: 138 ALDDEERVLLRDLARMAEQEIAAVQLATTDEL 169
[61][TOP]
>UniRef100_A0KTF2 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella sp. ANA-3
RepID=A0KTF2_SHESA
Length = 322
Score = 137 bits (345), Expect = 4e-31
Identities = 71/141 (50%), Positives = 90/141 (63%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L VLDT+ E+RFD ITRL +F PI LV+LVD +RQWFKS QG+ V QT R S CA
Sbjct: 20 LNVLDTDAEERFDRITRLTRRIFSLPICLVTLVDANRQWFKSRQGIEVEQTPRDISLCAH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ H + VV +AL+D RF +NPLV PHIRFY G PL R+G+LC+I N+PR
Sbjct: 80 AI--NHDGIFVVHDALKDPRFCDNPLVTEPPHIRFYVGYPLTIQGEYRVGTLCLIGNEPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
F E L ++ +MV E+
Sbjct: 138 DFTEEDAETLTDLGQMVEAEL 158
[62][TOP]
>UniRef100_C5B219 Putative uncharacterized protein n=1 Tax=Methylobacterium
extorquens AM1 RepID=C5B219_METEA
Length = 279
Score = 136 bits (343), Expect = 8e-31
Identities = 71/142 (50%), Positives = 93/142 (65%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L +LDT P+ FD IT+L +F PIAL+SL+D+DRQWFK+ GL V T R+ +FC
Sbjct: 28 RLQLLDTPPDPAFDRITQLAQTLFDVPIALISLLDEDRQWFKAKCGLHVSGTPREQAFCN 87
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+T+L H V VV +A F NPLV G P IRFYAG PL+ G R+GSLC+ID K
Sbjct: 88 YTIL--HDSVFVVPDARAHADFALNPLVTGEPFIRFYAGAPLIVAPGTRIGSLCLIDRKL 145
Query: 364 RQFDAESCNMLANMAEMVVREI 429
R F+ E +LA +A++V EI
Sbjct: 146 RAFNEEDSQLLARLAQVVTDEI 167
[63][TOP]
>UniRef100_A9VXM6 GAF domain protein n=2 Tax=Methylobacterium extorquens group
RepID=A9VXM6_METEP
Length = 276
Score = 136 bits (343), Expect = 8e-31
Identities = 71/142 (50%), Positives = 93/142 (65%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L +LDT P+ FD IT+L +F PIAL+SL+D+DRQWFK+ GL V T R+ +FC
Sbjct: 25 RLQLLDTPPDPAFDRITQLAQTLFDVPIALISLLDEDRQWFKAKCGLHVSGTPREQAFCN 84
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+T+L H V VV +A F NPLV G P IRFYAG PL+ G R+GSLC+ID K
Sbjct: 85 YTIL--HDSVFVVPDARAHADFALNPLVTGEPFIRFYAGAPLIVAPGTRIGSLCLIDRKL 142
Query: 364 RQFDAESCNMLANMAEMVVREI 429
R F+ E +LA +A++V EI
Sbjct: 143 RAFNEEDSQLLARLAQVVTDEI 164
[64][TOP]
>UniRef100_C7CHC2 Putative uncharacterized protein n=1 Tax=Methylobacterium
extorquens DM4 RepID=C7CHC2_METED
Length = 267
Score = 136 bits (343), Expect = 8e-31
Identities = 71/142 (50%), Positives = 93/142 (65%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L +LDT P+ FD IT+L +F PIAL+SL+D+DRQWFK+ GL V T R+ +FC
Sbjct: 16 RLQLLDTPPDPAFDRITQLAQTLFDVPIALISLLDEDRQWFKAKCGLHVSGTPREQAFCN 75
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+T+L H V VV +A F NPLV G P IRFYAG PL+ G R+GSLC+ID K
Sbjct: 76 YTIL--HDSVFVVPDARAHADFALNPLVTGEPFIRFYAGAPLIVAPGTRIGSLCLIDRKL 133
Query: 364 RQFDAESCNMLANMAEMVVREI 429
R F+ E +LA +A++V EI
Sbjct: 134 RAFNEEDSRLLARLAQVVTDEI 155
[65][TOP]
>UniRef100_P73271 Slr1142 protein n=1 Tax=Synechocystis sp. PCC 6803
RepID=P73271_SYNY3
Length = 169
Score = 136 bits (342), Expect = 1e-30
Identities = 64/142 (45%), Positives = 96/142 (67%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT +++F+ ITRL C V P+A +SLVD++RQWFKS++GL + +T R SFCA
Sbjct: 20 LKILDTPSDEKFNRITRLLCRVLDMPVAAISLVDENRQWFKSIRGLDLTETPRCVSFCAH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
T+L + LV+ + L D+RF +NPLVL +PH+RFYAG PL + + +G+LC+ D KPR
Sbjct: 80 TILED--RTLVISDTLSDLRFADNPLVLEAPHVRFYAGHPLKILDNIHVGTLCVYDTKPR 137
Query: 367 QFDAESCNMLANMAEMVVREIE 432
+ + L ++A V E++
Sbjct: 138 EISDDDVQFLEDLAITVANELK 159
[66][TOP]
>UniRef100_C7CCD7 Putative diguanylate cyclase (GGDEF) /phosphodiesterase (EAL), with
GAF and two PAS/PAC sensor domains n=1
Tax=Methylobacterium extorquens DM4 RepID=C7CCD7_METED
Length = 1028
Score = 135 bits (341), Expect = 1e-30
Identities = 77/174 (44%), Positives = 103/174 (59%), Gaps = 6/174 (3%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LD+ PE FD + R +F PIA VSLVD DRQWFK+ G+ T R +FCA+
Sbjct: 22 LHILDSAPEAHFDAVCRTAAALFSVPIAFVSLVDSDRQWFKAKCGIAAEGTPRDVAFCAY 81
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L + +VLVVENA D RF NPLV+G +RFYAG PL+ +G+R+G++CI D KP
Sbjct: 82 AILSD--DVLVVENAAVDPRFAINPLVVGDLAVRFYAGAPLILRSGIRVGTICIFDTKPC 139
Query: 367 QFDAESCNMLANMAEMVVREIEKDK---LIE---AQKIKSEMLYRENNQLIRAL 510
F L ++A +VV IE + IE A++ +SE L N RAL
Sbjct: 140 SFSEMQRTQLQDLARIVVAHIELHQGRLTIEAALAERTRSEALIAANEARYRAL 193
[67][TOP]
>UniRef100_A3YTX1 GAF protein n=1 Tax=Synechococcus sp. WH 5701 RepID=A3YTX1_9SYNE
Length = 231
Score = 135 bits (341), Expect = 1e-30
Identities = 78/170 (45%), Positives = 100/170 (58%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDTE E+ +DDIT L + PIAL+SLVD +RQWFKS G+ VR+T R SFCA +
Sbjct: 21 ILDTEAEQSYDDITLLASQLCDVPIALISLVDAERQWFKSRVGVDVRETSRDVSFCAHAI 80
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L E E LVV +A ED RFR+NPLV PHI FY G PL G R+G+LC+ID +PR
Sbjct: 81 LGE--ETLVVRDAREDERFRDNPLVCSEPHIVFYTGVPLSTPEGARIGTLCVIDRRPRDL 138
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQLIRALDCFN 522
+ L +A VV ++E L R ++QL AL+ N
Sbjct: 139 NDVQRRSLEALARQVVLQME--------------LKRVSDQLAGALERIN 174
[68][TOP]
>UniRef100_A8IGG5 Mixed lineage protein kinase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IGG5_CHLRE
Length = 785
Score = 135 bits (341), Expect = 1e-30
Identities = 68/170 (40%), Positives = 102/170 (60%), Gaps = 1/170 (0%)
Frame = +1
Query: 16 LDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVR-QTDRKSSFCAWTL 192
+D P+ I +L +F+ P ALV+L D R + + +G R + SFC WT+
Sbjct: 22 IDAPPDPEIASILKLVQSIFEAPAALVALFDDRRIFIRDAEGAFKRGDFPWRWSFCGWTM 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
+ +++V+ +AL+D RF NN +V G P +RFY G PL+A+NG R+G+LC D KPR+F
Sbjct: 82 ASRNDQIMVIPDALKDARFCNNEMVRGGPGVRFYCGTPLIASNGHRIGTLCFADVKPREF 141
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQLIRALDCFN 522
DA C +L N+AE+VVR +EKD ++ + + L L R LDCF+
Sbjct: 142 DASRCVVLNNLAELVVRHLEKDIALQLRAHDNNSLAAAYGNLRRTLDCFD 191
[69][TOP]
>UniRef100_Q21KX5 Sensor protein n=1 Tax=Saccharophagus degradans 2-40
RepID=Q21KX5_SACD2
Length = 401
Score = 135 bits (340), Expect = 2e-30
Identities = 72/143 (50%), Positives = 90/143 (62%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT E+ FDDIT + V PIALVSLVD+ RQWFKS QGL +T R +FCA +
Sbjct: 22 ILDTASEQGFDDITFIASQVCDTPIALVSLVDERRQWFKSKQGLTACETHRDLAFCAHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
P VV N LED RF +NPLV G P IRFYAG PL+ +G LG+LC+ID +PR
Sbjct: 82 HDTAP--FVVNNTLEDDRFADNPLVTGPPDIRFYAGVPLICPDGYALGTLCVIDTRPRSL 139
Query: 373 DAESCNMLANMAEMVVREIEKDK 441
D +L+ +A VV ++E K
Sbjct: 140 DDTQLTILSALARQVVAQLELRK 162
[70][TOP]
>UniRef100_Q1J3M1 Diguanylate cyclase with GAF sensor n=1 Tax=Deinococcus
geothermalis DSM 11300 RepID=Q1J3M1_DEIGD
Length = 531
Score = 135 bits (340), Expect = 2e-30
Identities = 68/167 (40%), Positives = 99/167 (59%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
VLDT E FD ITRL + + P+A+++ +D+DRQW KS GL R SFCAW++
Sbjct: 44 VLDTPREAAFDRITRLATHLLRTPVAVINFIDRDRQWGKSAVGLEDTTAPRHDSFCAWSI 103
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + P L++EN D RFRNNP+V G+PH+ YAG PL+ G R+G+LC+ D++P
Sbjct: 104 LQDTP--LIIENTATDPRFRNNPMVTGAPHVHMYAGAPLITPAGHRIGTLCVTDSQPHPL 161
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQLIRALD 513
A L ++A +VV E+E ++ + R N L R+L+
Sbjct: 162 SAADIQALQDLAALVVSELELRARNRHLGLELDAQARLNADLRRSLE 208
[71][TOP]
>UniRef100_A1WZ01 Sensor protein n=1 Tax=Halorhodospira halophila SL1
RepID=A1WZ01_HALHL
Length = 680
Score = 135 bits (340), Expect = 2e-30
Identities = 68/158 (43%), Positives = 98/158 (62%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDTE E FD R C +++ PIA V+ VD+DRQWFKS QGL +T R +SFC +
Sbjct: 22 ILDTEAEAAFDRCVRTLCQIYQVPIATVTFVDRDRQWFKSAQGLEDCETPRSTSFCGHVV 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
+P LVVE+ +D RF +NPLV PHIRFYAG PL+ G +G LCI D +PR+F
Sbjct: 82 ADGNP--LVVEDTHQDPRFHDNPLVTSPPHIRFYAGVPLITPAGQPIGVLCIQDRQPRRF 139
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRE 486
E L ++A +++ E+E Q+++ ++ +R+
Sbjct: 140 SDEDLIPLQDLAVLLISELELRHRENVQRLRRQLEHRQ 177
[72][TOP]
>UniRef100_B6ALC1 Diguanylate cyclase with GAF sensor n=1 Tax=Leptospirillum sp.
Group II '5-way CG' RepID=B6ALC1_9BACT
Length = 322
Score = 135 bits (340), Expect = 2e-30
Identities = 66/146 (45%), Positives = 96/146 (65%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT PE+RFD +TR+ +F PIALV+LVD+DRQWFKS GL V +T R SFC
Sbjct: 20 LDILDTPPEERFDRLTRMARRLFNVPIALVTLVDEDRQWFKSNMGLAVSETPRSVSFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L E + ++ +A D RF +NPLVLG P IRFYAGC L + ++G+LC+ID++PR
Sbjct: 80 AILQE--DFFIIPDARSDPRFSDNPLVLGDPRIRFYAGCVLRTQDNQKIGTLCLIDHEPR 137
Query: 367 QFDAESCNMLANMAEMVVREIEKDKL 444
+ + +L ++ + +E+ K+
Sbjct: 138 AMEPQDLLVLEDLTSLAEQELSALKM 163
[73][TOP]
>UniRef100_A3JAN2 Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain
n=1 Tax=Marinobacter sp. ELB17 RepID=A3JAN2_9ALTE
Length = 319
Score = 135 bits (339), Expect = 2e-30
Identities = 67/146 (45%), Positives = 96/146 (65%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT E+RFD +TR+ +F ++LVSLVD+DRQWFKS QGL +T R SFC
Sbjct: 20 LKILDTAHEERFDRVTRMAKRMFGVSVSLVSLVDEDRQWFKSSQGLEATETPRDISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ + ++ +A+ED+RF +NPLV +P+IRFYAG PL GL++G+LC+ID KPR
Sbjct: 80 AI--NQNGLFIIPDAIEDVRFADNPLVTDAPNIRFYAGYPLEIREGLKIGTLCLIDQKPR 137
Query: 367 QFDAESCNMLANMAEMVVREIEKDKL 444
D E + ++ MV +EI+ +L
Sbjct: 138 VMDEEDQQLFKDLGAMVEQEIKSIQL 163
[74][TOP]
>UniRef100_C0N9M8 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010
RepID=C0N9M8_9GAMM
Length = 318
Score = 134 bits (338), Expect = 3e-30
Identities = 68/146 (46%), Positives = 96/146 (65%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LD++ ++RFD +TRL +F PI+LVSLVD++RQWFKS G+ ++T R SFC
Sbjct: 20 LNLLDSDKDERFDRLTRLAVSIFDVPISLVSLVDENRQWFKSCYGISAKETGRDVSFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L + E V+E+ D RF +NPLV+G PHIRFYAG P+ + LG+LC+ID +PR
Sbjct: 80 AILGD--EAFVIEDTHLDSRFVDNPLVVGEPHIRFYAGYPIRHVDNFILGTLCLIDTRPR 137
Query: 367 QFDAESCNMLANMAEMVVREIEKDKL 444
F +L +AE+V REI +L
Sbjct: 138 HFSHREQLILQGLAELVEREIHAIQL 163
[75][TOP]
>UniRef100_B7FU53 Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP
1055/1 RepID=B7FU53_PHATR
Length = 153
Score = 134 bits (338), Expect = 3e-30
Identities = 76/140 (54%), Positives = 96/140 (68%), Gaps = 4/140 (2%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGL-PVRQTDRKSSFCAWT 189
+LD E E+ F+ IT L C +F PIALVSLVD RQWF S +GL VR+T RK +FCA
Sbjct: 16 ILDAEREESFERITALACRIFNVPIALVSLVDLGRQWFMSNRGLGSVRETPRKYAFCAHA 75
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
+L +H +LVV +A +D RF NPLV G P+IRFYAG PLV+ G +LG+LCIID+K R
Sbjct: 76 ILNKH-NLLVVPDASKDFRFETNPLVTGPPNIRFYAGSPLVSPEGYKLGTLCIIDSKVRP 134
Query: 370 ---FDAESCNMLANMAEMVV 420
DAE L ++A+MVV
Sbjct: 135 EGLLDAEKAT-LRDLADMVV 153
[76][TOP]
>UniRef100_B4WNN7 GAF domain protein n=1 Tax=Synechococcus sp. PCC 7335
RepID=B4WNN7_9SYNE
Length = 242
Score = 134 bits (337), Expect = 4e-30
Identities = 65/140 (46%), Positives = 95/140 (67%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT E+ +DDIT L + PIAL+SLVDKDRQWFKS G+ VR+T R SFCA +
Sbjct: 21 ILDTADEQTYDDITSLAAFICDVPIALISLVDKDRQWFKSKVGISVRETPRDVSFCAHAI 80
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + ++ +V++A +D RF +NPLV +P+IRFYAG PL+ +G LG+LC+ID++P++
Sbjct: 81 LTK--DITIVKDARDDARFSDNPLVTCAPNIRFYAGVPLITASGHPLGTLCVIDHQPKEL 138
Query: 373 DAESCNMLANMAEMVVREIE 432
L +A +V ++E
Sbjct: 139 SEVQRRTLIALARQIVVQLE 158
[77][TOP]
>UniRef100_Q08QL2 Sensor protein n=1 Tax=Stigmatella aurantiaca DW4/3-1
RepID=Q08QL2_STIAU
Length = 421
Score = 134 bits (336), Expect = 5e-30
Identities = 66/141 (46%), Positives = 92/141 (65%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LDT PE+ FDD+ RL L+ P+ALVSL+D+ RQWFK+ G+ +T R +FCA
Sbjct: 21 GILDTPPEQGFDDLARLASLLCGTPVALVSLLDQGRQWFKARVGVDAAETHRDLAFCAHA 80
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
+L + E+ VV +A D RF++NPLV G PH+RFYAG PL NGL LG+LC+ID+ PR+
Sbjct: 81 ILQD--ELFVVPDAHLDERFQDNPLVTGEPHVRFYAGTPLKTANGLNLGTLCVIDHVPRE 138
Query: 370 FDAESCNMLANMAEMVVREIE 432
E L + V +++
Sbjct: 139 LKPEQTEALRLLGRQVESQLQ 159
[78][TOP]
>UniRef100_C5V279 Diguanylate cyclase with PAS/PAC and GAF sensors n=1
Tax=Gallionella ferruginea ES-2 RepID=C5V279_9PROT
Length = 462
Score = 134 bits (336), Expect = 5e-30
Identities = 63/143 (44%), Positives = 94/143 (65%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
K G+LDTEPE F+ + +L + P A +SL+D+ RQWFK++ G+ V +T R +FCA
Sbjct: 19 KYGILDTEPEAVFNSMVQLASYICHTPFAAISLIDEHRQWFKAIVGVEVSETPRDVAFCA 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
T+L + E ++V N LED RF +NP V G ++RFYAG PLV +G RLG+LC+ D +P
Sbjct: 79 HTILQQ--ETMIVPNTLEDERFCDNPFVEGGLNLRFYAGVPLVTESGYRLGTLCVFDQQP 136
Query: 364 RQFDAESCNMLANMAEMVVREIE 432
RQ AE + + +A+ V+ ++
Sbjct: 137 RQLSAEQLDAIKTLADSVMAHLD 159
[79][TOP]
>UniRef100_Q1IMB4 Putative anti-sigma regulatory factor, serine/threonine protein
kinase n=1 Tax=Candidatus Koribacter versatilis Ellin345
RepID=Q1IMB4_ACIBL
Length = 321
Score = 133 bits (335), Expect = 6e-30
Identities = 67/153 (43%), Positives = 96/153 (62%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT+PE+ FDD+ + + + PIAL++LVD+DRQWFKS G+ V++T R SFC+ +
Sbjct: 17 ILDTQPEQAFDDLALIASHICETPIALITLVDEDRQWFKSRIGIDVQETARSISFCSHAI 76
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
E V V +A D RFR+NP+V G PHIRFYAG PL + +G LG+LC+ID PR
Sbjct: 77 --EQKGVFTVPDATLDPRFRDNPVVKGEPHIRFYAGAPLASRDGYALGTLCVIDYVPRTL 134
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSE 471
E N L + V ++E + +E ++ E
Sbjct: 135 TPEQKNALTALERQVAAQLELRRNLEELRVALE 167
[80][TOP]
>UniRef100_B2FHL0 Putative GGDEF and GAF signalling protein n=1 Tax=Stenotrophomonas
maltophilia K279a RepID=B2FHL0_STRMK
Length = 356
Score = 133 bits (335), Expect = 6e-30
Identities = 65/159 (40%), Positives = 103/159 (64%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LD++ EK FDD+ + V +A V+L+D +RQWFKS+QG+ + R S C +
Sbjct: 22 ILDSQREKSFDDLVAIAKAVCGTSMAAVTLIDVERQWFKSIQGIDAAENLRSESMCGHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L H +++VVE+AL+DIRF +NP+V G PHIRFYAG PL++++GL LG+LC+ D +P+
Sbjct: 82 LQPH-QIMVVEDALQDIRFHDNPVVTGDPHIRFYAGAPLISSDGLPLGTLCVFDAQPQHL 140
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYREN 489
++ LA ++ V+ +E + A I+ ML R++
Sbjct: 141 PSDKAEALAALSRQVMLVMELRRF--ALDIQKHMLERDD 177
[81][TOP]
>UniRef100_B4VLP5 PAS fold family n=1 Tax=Microcoleus chthonoplastes PCC 7420
RepID=B4VLP5_9CYAN
Length = 568
Score = 133 bits (335), Expect = 6e-30
Identities = 67/141 (47%), Positives = 92/141 (65%), Gaps = 1/141 (0%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE+ FDD+T L + PIAL+SL+D++RQWFKS G+ QT R +FCA +
Sbjct: 73 ILDTLPEQDFDDLTMLASHICGTPIALISLIDQNRQWFKSKVGIDATQTPRDQAFCAHAI 132
Query: 193 L-PEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
L PE +++VV NALED RF NPLV P+IRFYAG PLV +G LG+LC+ID P
Sbjct: 133 LNPE--DIMVVPNALEDERFAGNPLVTSDPNIRFYAGAPLVTEDGFPLGTLCVIDQIPHD 190
Query: 370 FDAESCNMLANMAEMVVREIE 432
+ + L ++ V+ ++E
Sbjct: 191 LTPQQISALQALSRQVINQME 211
[82][TOP]
>UniRef100_A1ZNR6 Serine/threonine protein kinases n=1 Tax=Microscilla marina ATCC
23134 RepID=A1ZNR6_9SPHI
Length = 508
Score = 133 bits (335), Expect = 6e-30
Identities = 70/169 (41%), Positives = 106/169 (62%), Gaps = 7/169 (4%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT EK FDD+ +L + + PI+L+SLV +++QWFK+ GL +++T R +FCA +
Sbjct: 22 ILDTGFEKEFDDLVKLASYICEAPISLISLVAENKQWFKAKVGLEMQETPRSQAFCAHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
P + V+E+A +D RF +NPLV SP IRFYAG PL G RLG+LC+ID KPRQ
Sbjct: 82 --HTPNLFVIEDATKDERFWDNPLVTNSPDIRFYAGMPLTTPEGFRLGTLCVIDQKPRQL 139
Query: 373 DAESCNMLANMAEMVVREIE---KDKLIEAQK----IKSEMLYRENNQL 498
L +A V+ ++E K K + A++ +K+E + ++N+ L
Sbjct: 140 SLAQKQALQTLATQVITQLELRLKLKTVAAERQELVLKNEEVQQKNSLL 188
[83][TOP]
>UniRef100_A3JAM7 Diguanylate cyclase (GGDEF domain) n=1 Tax=Marinobacter sp. ELB17
RepID=A3JAM7_9ALTE
Length = 349
Score = 133 bits (334), Expect = 8e-30
Identities = 73/151 (48%), Positives = 92/151 (60%), Gaps = 1/151 (0%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LDT PE+RFD ITRL F L+SLVD DRQWFKS GL Q R SFC
Sbjct: 21 GLLDTPPEERFDRITRLAARFFGVETCLLSLVDSDRQWFKSRVGLEENQLGRDISFCGHA 80
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
+L +L V +AL+D RF NPLV +PHIRFYAG P+ +GL +G+LC+ID P
Sbjct: 81 ILDRG--ILTVTDALQDARFSENPLVTSAPHIRFYAGAPVREPSGLPIGTLCLIDPSPHY 138
Query: 370 FDAESCNMLANMAEMVVREIEK-DKLIEAQK 459
F E L + A+MV EI + D+ E+Q+
Sbjct: 139 FSDEQKQALRDFADMVEHEIARIDQADESQR 169
[84][TOP]
>UniRef100_Q2JR31 Sensor protein n=1 Tax=Synechococcus sp. JA-3-3Ab
RepID=Q2JR31_SYNJA
Length = 1523
Score = 132 bits (333), Expect = 1e-29
Identities = 68/141 (48%), Positives = 90/141 (63%), Gaps = 1/141 (0%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE FD+I RL + PIALVSL+D+ RQWFK+ G+ V++T R +FCA +
Sbjct: 22 ILDTAPETAFDEIVRLAAYICGTPIALVSLIDEHRQWFKAKFGVDVQETPRDVAFCAHAI 81
Query: 193 L-PEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
L P+ P LVV +A +D RF +NP V PHIRFYAG PLV G LG+LC++D +PR
Sbjct: 82 LSPQEP--LVVPDATQDPRFADNPFVTQEPHIRFYAGIPLVTPEGQALGTLCVVDYQPRH 139
Query: 370 FDAESCNMLANMAEMVVREIE 432
E L +A VV ++E
Sbjct: 140 LTPEQLEQLQALAHQVVAQLE 160
[85][TOP]
>UniRef100_C7C538 Putative uncharacterized protein n=1 Tax=Enterobacter turicensis
RepID=C7C538_9ENTR
Length = 326
Score = 132 bits (333), Expect = 1e-29
Identities = 68/139 (48%), Positives = 90/139 (64%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LD+ P +RFD +TRL +F P+ALVSLVD++R WFKS G V++ R SFCA
Sbjct: 21 GLLDSGPSERFDRLTRLARRLFNAPVALVSLVDQERLWFKSCDGYCVQEVPRDISFCAHA 80
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
+L P L+V + D RF +NPLV G ++RFYAGCP+ +G GS CIIDN PR+
Sbjct: 81 ILKNEP--LIVPDTHNDERFFDNPLVTGETNVRFYAGCPVHLPDGATAGSFCIIDNVPRE 138
Query: 370 FDAESCNMLANMAEMVVRE 426
F AE ML ++A +V E
Sbjct: 139 FGAEEVAMLKDLAAIVEDE 157
[86][TOP]
>UniRef100_B5IP66 GAF n=1 Tax=Cyanobium sp. PCC 7001 RepID=B5IP66_9CHRO
Length = 231
Score = 132 bits (333), Expect = 1e-29
Identities = 68/140 (48%), Positives = 91/140 (65%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDTE E+ +DDIT L + PIAL+SLVD +RQWFKS G+ V +T R SFCA +
Sbjct: 21 ILDTEAEQAYDDITLLAAQLCDVPIALISLVDAERQWFKSRVGVDVEETSRDVSFCAHAI 80
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + E LVV +A ED RF++NPLV P+I FYAG PL G R+G+LC+ID++PR+
Sbjct: 81 LSD--ETLVVRDAREDDRFQDNPLVCSEPNIVFYAGVPLRTPEGARIGTLCVIDHRPREL 138
Query: 373 DAESCNMLANMAEMVVREIE 432
L +A VV ++E
Sbjct: 139 SPTQLQALEALARQVVLQLE 158
[87][TOP]
>UniRef100_C6XAD7 Diguanylate cyclase with PAS/PAC and GAF sensors n=1
Tax=Methylovorus sp. SIP3-4 RepID=C6XAD7_METSD
Length = 640
Score = 132 bits (332), Expect = 1e-29
Identities = 69/141 (48%), Positives = 92/141 (65%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
LG+LDT+PE FD IT+L L PIAL+SLVD DRQWFKS G+ ++ R +FCA
Sbjct: 20 LGLLDTDPEPVFDRITQLVALTLNVPIALISLVDTDRQWFKSRIGVEAEESPRDVAFCAH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L P +VV +AL D RF +NP+VL P+IRFYAG P+ T G LG+LC ID +PR
Sbjct: 80 AILQTKP--MVVNDALLDERFADNPMVLQFPNIRFYAGIPIRTTAGYALGTLCAIDAQPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
+ +L +A++V +EI
Sbjct: 138 ELSKHEMEILTCLADLVSKEI 158
[88][TOP]
>UniRef100_B4RWH1 Sensor protein n=1 Tax=Alteromonas macleodii 'Deep ecotype'
RepID=B4RWH1_ALTMD
Length = 542
Score = 132 bits (332), Expect = 1e-29
Identities = 72/174 (41%), Positives = 107/174 (61%), Gaps = 4/174 (2%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
VLDTE E+ FDD+T L + PIAL+SL+D DRQWFKS GL +T R+ +FC+ +
Sbjct: 22 VLDTEAEQLFDDLTTLASQICDTPIALISLIDPDRQWFKSRVGLDAEETSREIAFCSHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + +V + NA D RF +NPLV G+P IRFYAG PLV+ +G +G+LC ID KPR+
Sbjct: 82 LQD--DVFEIPNASLDPRFHDNPLVTGAPDIRFYAGAPLVSPSGHAIGTLCTIDRKPRKL 139
Query: 373 DAESCNMLANMAEMVVREIE---KDKLIE-AQKIKSEMLYRENNQLIRALDCFN 522
L +++ VV +E K++ +E + +S+ L ++++ L+ N
Sbjct: 140 TESQKTSLQTLSKSVVAHLELKRKNRELERTSQFRSDFLSYVSHEIRTPLNAIN 193
[89][TOP]
>UniRef100_Q1YPY3 PAS:GGDEF protein n=1 Tax=gamma proteobacterium HTCC2207
RepID=Q1YPY3_9GAMM
Length = 873
Score = 132 bits (332), Expect = 1e-29
Identities = 69/170 (40%), Positives = 103/170 (60%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L +LDTE EK FD+ T L + PIAL+SL+D+ RQWFKS GL + +T R +FCA
Sbjct: 18 ELNILDTESEKEFDEFTALAAHICLAPIALISLIDEHRQWFKSKVGLDLTETSRDIAFCA 77
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+L + ++ V + D RF +NPLVL SPHIRFYAG PL+ +G LG+LC+ID+ P
Sbjct: 78 HAIL-QPTSLMEVPDTQLDKRFLDNPLVLESPHIRFYAGAPLIGIDGYALGTLCVIDHVP 136
Query: 364 RQFDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQLIRALD 513
R L ++ + ++IE + + K + +L +N++L L+
Sbjct: 137 RTLSEAQRTALTVLSRAIAQQIELGRRLLRVKSSTGVLLTQNSRLEAQLE 186
[90][TOP]
>UniRef100_C4D7C0 GAF domain-containing protein n=1 Tax=Spirosoma linguale DSM 74
RepID=C4D7C0_9SPHI
Length = 188
Score = 132 bits (332), Expect = 1e-29
Identities = 64/154 (41%), Positives = 95/154 (61%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
++DT PE+++DDIT+L + PI+L+S +D+DRQWFKS G P QTDR+ SFC +
Sbjct: 22 IIDTLPEQQYDDITQLAAQICGMPISLISFIDQDRQWFKSRHGFPHLQTDRQLSFCTHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
+ ++++V +A +D+RF NPLV P + FYAG PLV G LG+LC+IDNKP Q
Sbjct: 82 -QQPDKMMIVSDATQDVRFSENPLVYQEPKVVFYAGMPLVTEEGWALGTLCVIDNKPNQL 140
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEM 474
+ L +A V+ + K E+ + +M
Sbjct: 141 TSAQAKSLTILARQVITLLSLRKKTESWSERRKM 174
[91][TOP]
>UniRef100_A4B9Q6 Diguanylate cyclase, putative n=1 Tax=Reinekea blandensis MED297
RepID=A4B9Q6_9GAMM
Length = 320
Score = 132 bits (332), Expect = 1e-29
Identities = 65/141 (46%), Positives = 95/141 (67%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LD+EPE+RFD +TR+ +F+ PIAL +LVD++RQWFKS G+ +++TDR+ SFC
Sbjct: 20 LNLLDSEPEERFDRLTRMAKRMFEVPIALFTLVDENRQWFKSCFGVDLKETDREISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ + +VEN L+D RF +NPLV G P IRFYAG P+ +G +G+LC++D R
Sbjct: 80 AI--NGHDTFIVENTLKDARFHDNPLVEGEPGIRFYAGTPVKTRDGYSIGTLCVMDRVAR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
F E ML ++A ++ EI
Sbjct: 138 VFHPEDQAMLEDLARLLEAEI 158
[92][TOP]
>UniRef100_Q7NVX0 Putative uncharacterized protein n=1 Tax=Chromobacterium violaceum
RepID=Q7NVX0_CHRVO
Length = 168
Score = 132 bits (331), Expect = 2e-29
Identities = 69/148 (46%), Positives = 95/148 (64%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L +LDT+PE+R+D IT C F IAL+SLVD DR WFKS GL +T R SFCA
Sbjct: 19 ELLILDTDPEERYDAITAYCRSRFAVKIALISLVDSDRLWFKSRCGLDASETPRDISFCA 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+L + ++L + +A D RF +NP+VLG P+IRFYAG PL ++G +G+LC+ID KP
Sbjct: 79 HAILGD--DILEIPDASNDNRFSDNPMVLGDPNIRFYAGAPLKLSSGHTIGTLCLIDPKP 136
Query: 364 RQFDAESCNMLANMAEMVVREIEKDKLI 447
++ E L +A VV EIE + +
Sbjct: 137 KRLAGEEKRHLKTLAHTVVLEIEGSRAV 164
[93][TOP]
>UniRef100_Q4KGS9 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas
fluorescens Pf-5 RepID=Q4KGS9_PSEF5
Length = 591
Score = 132 bits (331), Expect = 2e-29
Identities = 70/163 (42%), Positives = 101/163 (61%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT +RFD I RL FK P AL++LVD+DRQWFKS G QT + SFCA+
Sbjct: 18 LELLDTARCERFDRICRLAAEYFKVPTALITLVDRDRQWFKSRVGFAPEQTPIEQSFCAY 77
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
T+ + +V VENA +D+RF NPLV P I FYAG PL+ + G +GSLC+ID +P+
Sbjct: 78 TI--KSGDVFEVENARQDVRFHANPLVTQDPGIGFYAGAPLITSTGHAIGSLCVIDRQPQ 135
Query: 367 QFDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQ 495
+ +A L ++A +V+ ++E+ + + + S + RE Q
Sbjct: 136 RLNAAERQQLRDLASLVMEQVEQRQRLTRRDPVSRLPNREQFQ 178
[94][TOP]
>UniRef100_Q31MP6 Diguanylate cyclase with GAF sensor n=2 Tax=Synechococcus elongatus
RepID=Q31MP6_SYNE7
Length = 506
Score = 132 bits (331), Expect = 2e-29
Identities = 65/143 (45%), Positives = 92/143 (64%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+ G+LDT PE+ FDD+T+L + + PIAL+SL+D+DRQWFKS GL + R +SFC
Sbjct: 19 RYGILDTPPEQHFDDLTQLIAAICEVPIALISLIDRDRQWFKSRVGLEDDSSPRSTSFCG 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+ E ++ +VE+A D RF +NP V PHIRFYAG PL+ + LG+LC+ID KP
Sbjct: 79 HAIQQE--DLFIVEDAKADPRFVDNPFVTQEPHIRFYAGSPLITDDEQILGTLCVIDRKP 136
Query: 364 RQFDAESCNMLANMAEMVVREIE 432
R + L ++ V+RE+E
Sbjct: 137 RHLNDLQQQALRILSRQVIRELE 159
[95][TOP]
>UniRef100_C0N6E8 GGDEF domain protein n=1 Tax=Methylophaga thiooxidans DMS010
RepID=C0N6E8_9GAMM
Length = 320
Score = 132 bits (331), Expect = 2e-29
Identities = 65/146 (44%), Positives = 96/146 (65%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT E+RFD +TR+ +F I+LVSLVD++RQWFKS QG+ +T R+ SFC
Sbjct: 20 LQILDTSHEERFDRVTRMAKRMFGVSISLVSLVDENRQWFKSAQGIDASETPREISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ + ++ +ALED RF +NPLV +P+IRFYAG PL G+ LG+LC+ID +P+
Sbjct: 80 AI--NQDGLFIIPDALEDERFYDNPLVTDAPNIRFYAGYPLKLRQGINLGTLCLIDGEPK 137
Query: 367 QFDAESCNMLANMAEMVVREIEKDKL 444
+ D E +L ++ M+ +EI +L
Sbjct: 138 ELDEEDQQLLEDLGAMIEQEINSIQL 163
[96][TOP]
>UniRef100_A4C1I1 Sensor protein n=1 Tax=Polaribacter irgensii 23-P
RepID=A4C1I1_9FLAO
Length = 399
Score = 132 bits (331), Expect = 2e-29
Identities = 68/162 (41%), Positives = 103/162 (63%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
VLD+ PE+ +D IT + + PIALVS++ K++QWFKS GL ++T R+ SFCA ++
Sbjct: 22 VLDSLPEEDYDGITAIAASICGTPIALVSIIGKNKQWFKSHHGLAAKETPREFSFCAHSI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L E+ ++ +A +D RF NNPL +G+P++ FYAG PL ++ G LG+LC+IDNKP
Sbjct: 82 L-NTDELFIINDATKDDRFANNPLTIGAPNVVFYAGAPLNSSEGFPLGTLCVIDNKPNAL 140
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQL 498
+ L +A+ VV +E K + SE ++R N+QL
Sbjct: 141 NKRQQQSLKLLAKQVVNLLELRKKNKELLKSSEEVHRLNSQL 182
[97][TOP]
>UniRef100_Q8YQQ8 Sensor protein n=1 Tax=Nostoc sp. PCC 7120 RepID=Q8YQQ8_ANASP
Length = 1550
Score = 131 bits (330), Expect = 2e-29
Identities = 66/140 (47%), Positives = 86/140 (61%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE FDDITRL + PIAL+SL+D++RQWFK+ GL R+T R +FCA T+
Sbjct: 21 ILDTPPEAAFDDITRLASYICGTPIALISLIDQNRQWFKATFGLERRETPRDEAFCAHTI 80
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L E +V +A D RF NPLV+ P IRFYAG PL G LG+LC+ID PR
Sbjct: 81 L--ESEAFIVPDATADERFATNPLVISDPKIRFYAGVPLTNPEGYSLGTLCVIDYIPRNL 138
Query: 373 DAESCNMLANMAEMVVREIE 432
E L + V++++E
Sbjct: 139 SFEQIEALQILGRQVIKQLE 158
[98][TOP]
>UniRef100_Q2JP01 Sensor protein n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13)
RepID=Q2JP01_SYNJB
Length = 1526
Score = 131 bits (330), Expect = 2e-29
Identities = 68/141 (48%), Positives = 90/141 (63%), Gaps = 1/141 (0%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE FD+I RL + PIALVSL+D+ RQWFK+ G+ V++T R +FCA +
Sbjct: 22 ILDTAPETAFDEIVRLAAHICGTPIALVSLIDEHRQWFKAKFGVDVQETPRDVAFCAHAI 81
Query: 193 L-PEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
L P+ P LVV +A +D RF +NP V PHIRFYAG PLV G LG+LC++D +PR
Sbjct: 82 LSPKEP--LVVPDATQDPRFADNPFVAQEPHIRFYAGIPLVTPEGQALGTLCVVDYQPRH 139
Query: 370 FDAESCNMLANMAEMVVREIE 432
E L +A VV ++E
Sbjct: 140 LTPEQLEQLQALAHQVVAQLE 160
[99][TOP]
>UniRef100_Q3MCU9 Sensor protein n=1 Tax=Anabaena variabilis ATCC 29413
RepID=Q3MCU9_ANAVT
Length = 1550
Score = 131 bits (329), Expect = 3e-29
Identities = 65/140 (46%), Positives = 87/140 (62%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT+ E FDDITRL + PIAL+SL+D++RQWFKS GL R+T R +FC +T+
Sbjct: 21 ILDTQSEAAFDDITRLASYICGTPIALISLIDQNRQWFKSKVGLERRETPRDEAFCTYTI 80
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L +V +V +A D RF NPLV+ P IRFYAG PL G LG+LC+ID PR
Sbjct: 81 L--ESDVFIVPDATTDERFATNPLVISDPKIRFYAGVPLTNPEGYSLGTLCVIDYIPRNL 138
Query: 373 DAESCNMLANMAEMVVREIE 432
E L + V++++E
Sbjct: 139 SPEQIEALQILGRQVIKQLE 158
[100][TOP]
>UniRef100_Q12JR1 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella
denitrificans OS217 RepID=Q12JR1_SHEDO
Length = 320
Score = 131 bits (329), Expect = 3e-29
Identities = 65/146 (44%), Positives = 97/146 (66%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT E+RFD +TR+ +F I+LVSLVD++RQWFKS QGL +T R+ SFC
Sbjct: 20 LQILDTSDEERFDRVTRMAKRMFGVQISLVSLVDENRQWFKSKQGLDAEETSREISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ + ++ + ED RF +NPLV +P+IRFYAG PL +G+ LG+LC+ID+KP+
Sbjct: 80 AI--NQDGLFIIPDTNEDARFADNPLVTDAPNIRFYAGYPLKLRHGINLGTLCLIDSKPK 137
Query: 367 QFDAESCNMLANMAEMVVREIEKDKL 444
D+E +L ++ M+ +EI+ +L
Sbjct: 138 ILDSEDRQLLNDLGAMIEQEIKSVQL 163
[101][TOP]
>UniRef100_C3K2Q4 Sensor protein n=1 Tax=Pseudomonas fluorescens SBW25
RepID=C3K2Q4_PSEFS
Length = 439
Score = 131 bits (329), Expect = 3e-29
Identities = 72/160 (45%), Positives = 97/160 (60%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
LG+LD+ PE FDDI L + PIALVSLVDK+RQWFK+ GL VR+T R +FCA
Sbjct: 24 LGILDSAPEPGFDDIVLLATNLCDVPIALVSLVDKERQWFKACIGLDVRETHRDLAFCAH 83
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L EVLVVE+A D RF ++ LVLG P+IRFYAG P+ G LG++C+ID + R
Sbjct: 84 AIL-SPDEVLVVEDAALDARFEHSALVLGPPYIRFYAGAPIRDDRGFALGTVCVIDTRAR 142
Query: 367 QFDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRE 486
N L +A ++ L E +++++ L E
Sbjct: 143 TLTVAQHNALLALARQTASLLQLRLLSEQRELRARHLEHE 182
[102][TOP]
>UniRef100_B8G5J8 Diguanylate cyclase with GAF sensor n=1 Tax=Chloroflexus aggregans
DSM 9485 RepID=B8G5J8_CHLAD
Length = 367
Score = 131 bits (329), Expect = 3e-29
Identities = 68/163 (41%), Positives = 104/163 (63%), Gaps = 1/163 (0%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE+ ++DI RL + + P+ALV+L+D+DRQW K+ G + DRK +FC++T+
Sbjct: 32 ILDTLPEQFYEDIVRLAAYICQTPMALVNLIDRDRQWSKARLGFTDSEVDRKLAFCSYTI 91
Query: 193 LPEHPE-VLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
+P+ V VV +A D RF +NP V G P+IRFYAG PLV NG LG++C++D +P +
Sbjct: 92 --NYPDDVFVVPDATCDERFAHNPFVCGDPYIRFYAGAPLVTPNGYALGTVCVVDVRPHR 149
Query: 370 FDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQL 498
E ML +A VVR++E + + A ++ +L E +L
Sbjct: 150 LTPEQIEMLRVLARQVVRQLELRRDVLA--LEQRLLTNEQEKL 190
[103][TOP]
>UniRef100_B7KRQ5 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(S) n=1 Tax=Methylobacterium chloromethanicum CM4
RepID=B7KRQ5_METC4
Length = 1423
Score = 131 bits (329), Expect = 3e-29
Identities = 71/146 (48%), Positives = 93/146 (63%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+LGV + PE ++D I R +F PIA VSLV + Q FK GL T R+ SFC
Sbjct: 17 ELGVFGSGPEPQYDAICRTAQALFDVPIAYVSLVGETEQRFKGKCGLGAEATPREISFCT 76
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+T+L EVLVVE+A +D RF NPLV+G PHIRFYAG PLV ++G+ LGSLC+ID
Sbjct: 77 YTILSH--EVLVVEDATQDERFSANPLVIGKPHIRFYAGAPLVLSSGIHLGSLCLIDRVS 134
Query: 364 RQFDAESCNMLANMAEMVVREIEKDK 441
R F AE L ++A++VV ++ K
Sbjct: 135 RPFSAEQQERLRDLAQIVVVQLRLSK 160
[104][TOP]
>UniRef100_B9XKZ0 Putative GAF sensor protein n=1 Tax=bacterium Ellin514
RepID=B9XKZ0_9BACT
Length = 218
Score = 131 bits (329), Expect = 3e-29
Identities = 66/154 (42%), Positives = 99/154 (64%), Gaps = 1/154 (0%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
VLDT PE FD++T L + + P+AL++LVD++RQWFKS G+ + QT R SFCA +
Sbjct: 21 VLDTIPEVVFDELTELAAHICEAPVALITLVDENRQWFKSKVGIDLNQTSRDISFCAHAI 80
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L H +VLVV +A +D RF NPLV+ P IRFYAG PL+ +G LG+LC++D KP +
Sbjct: 81 L--HEDVLVVADASKDKRFAKNPLVVSEPRIRFYAGAPLITPDGQALGTLCVLDKKPHKI 138
Query: 373 DAESCNMLANMAEMVVREIE-KDKLIEAQKIKSE 471
+ L ++ V+ ++E + + +E K + +
Sbjct: 139 TPDQKRALEILSRHVMTQLELRRRSLELAKTRKD 172
[105][TOP]
>UniRef100_UPI0001AEC0D5 histidine kinase response regulator hybrid protein n=1
Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEC0D5
Length = 542
Score = 130 bits (328), Expect = 4e-29
Identities = 71/174 (40%), Positives = 107/174 (61%), Gaps = 4/174 (2%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
VLDTE E+ FDD+T L + + PIAL+SL+D +RQWFKS GL +T R +FC+ +
Sbjct: 22 VLDTEAEQLFDDLTALASQICETPIALISLIDPNRQWFKSRVGLDAEETSRDIAFCSHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L +V + NA D RF +NPLV G+P IRFYAG PL+ +G +G+LC ID+KPR+
Sbjct: 82 LQS--DVFEIPNATLDPRFHDNPLVTGAPDIRFYAGAPLITPSGHAIGTLCAIDSKPRKL 139
Query: 373 DAESCNMLANMAEMVVREIE---KDKLIE-AQKIKSEMLYRENNQLIRALDCFN 522
+ L +++ VV +E K++ +E + KS+ L ++++ L+ N
Sbjct: 140 TETQKSSLQTLSKSVVAHLELKRKNRELERTSQFKSDFLSYVSHEIRTPLNAIN 193
[106][TOP]
>UniRef100_B4SPP7 Diguanylate cyclase n=1 Tax=Stenotrophomonas maltophilia R551-3
RepID=B4SPP7_STRM5
Length = 356
Score = 130 bits (328), Expect = 4e-29
Identities = 64/159 (40%), Positives = 102/159 (64%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LD++ EK FDD+ + V +A V+L+D +RQWFKS+QG+ + R S C +
Sbjct: 22 ILDSQREKSFDDLVAIAKAVCGTSMAAVTLIDVERQWFKSIQGIDAAENLRSDSMCGHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + E++VVE+AL+D+RF +NP+V G PHIRFYAG PL++++GL LG+LC+ D P+
Sbjct: 82 L-QPQEIMVVEDALQDVRFHDNPVVTGDPHIRFYAGAPLISSDGLPLGTLCVFDAHPQHL 140
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYREN 489
++ LA ++ V+ +E + A I+ ML R++
Sbjct: 141 PSDKAEALAALSRQVMLVMELRRF--ALDIQKHMLERDD 177
[107][TOP]
>UniRef100_Q2BLH0 Sensor protein n=1 Tax=Neptuniibacter caesariensis
RepID=Q2BLH0_9GAMM
Length = 670
Score = 130 bits (328), Expect = 4e-29
Identities = 66/146 (45%), Positives = 93/146 (63%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LD+ EK FDD+T+L + PIAL+SL+D +RQWFKS GL +T R +FC+ +
Sbjct: 22 ILDSADEKEFDDLTQLASEICDTPIALISLIDPERQWFKSRVGLDATETSRDIAFCSHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L E +V VE+ L+D RF +NPLV GSP+IRFYAG PL+ +GL LG++C I N+P+
Sbjct: 82 LQE--DVFEVEDTLKDARFADNPLVTGSPNIRFYAGAPLITPSGLALGTICTISNEPKTL 139
Query: 373 DAESCNMLANMAEMVVREIEKDKLIE 450
N L + V+ +E K I+
Sbjct: 140 TDWQRNALVVLRNEVISRLELRKKIK 165
[108][TOP]
>UniRef100_A1ZHX4 Serine/threonine protein kinases n=1 Tax=Microscilla marina ATCC
23134 RepID=A1ZHX4_9SPHI
Length = 444
Score = 130 bits (328), Expect = 4e-29
Identities = 62/169 (36%), Positives = 102/169 (60%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+ +LDT+ E+ FD++ +L + PI+L+SLV +++QWFK+ GL R+T R+ +FCA
Sbjct: 19 RYNILDTDFEQAFDELIQLASYICSTPISLMSLVAENKQWFKAKVGLEARETPRELAFCA 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+ PE+ +VE+A +D RF +NPLV G P IRFYAG PL +G LG+LC+ID +P
Sbjct: 79 HAI--HRPELFIVEDATKDERFHDNPLVTGHPDIRFYAGMPLTTPDGFSLGTLCVIDKRP 136
Query: 364 RQFDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQLIRAL 510
R L +A + ++E + + K + + R+N ++ ++
Sbjct: 137 RDLTEAQKTALKTLASQAIAQLELRMKLRVIESKQKSIARKNQEIFESI 185
[109][TOP]
>UniRef100_A7MPS7 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC
BAA-894 RepID=A7MPS7_ENTS8
Length = 323
Score = 130 bits (327), Expect = 5e-29
Identities = 65/139 (46%), Positives = 89/139 (64%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LD P +RFD +TRL +F P+AL+SLVD+++ WF S G + R+ SFC T
Sbjct: 21 GLLDAAPTERFDRLTRLAKRLFNAPVALISLVDQEQLWFVSCDGAEPKPIPRRVSFCGHT 80
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
+L P L++ +AL D RF +NPLV G PHIRFYAGCP+ +G GSLCIID +PR
Sbjct: 81 ILSNAP--LIITDALSDERFCDNPLVNGPPHIRFYAGCPVRLPDGATAGSLCIIDTEPRA 138
Query: 370 FDAESCNMLANMAEMVVRE 426
F ++L ++A +V E
Sbjct: 139 FSEADAHLLRDLAAIVEDE 157
[110][TOP]
>UniRef100_Q98BW5 Mlr5400 protein n=1 Tax=Mesorhizobium loti RepID=Q98BW5_RHILO
Length = 416
Score = 130 bits (326), Expect = 7e-29
Identities = 63/143 (44%), Positives = 94/143 (65%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+ VLDT E FD I RL +VF PIA+VS++D RQW+K+ +GL + + +RK++FC
Sbjct: 28 RFDVLDTPREAPFDRIARLIKMVFDVPIAIVSVIDGHRQWYKACEGLAINEVERKATFCQ 87
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+T+L E P L+V +A +D RF +NP+V PHIRFYAG PL + +G +GS+C I P
Sbjct: 88 YTILQEEP--LIVTDATKDPRFADNPMVRNDPHIRFYAGVPLRSRDGHNIGSVCAIGYIP 145
Query: 364 RQFDAESCNMLANMAEMVVREIE 432
R+F +L + A++ + E+E
Sbjct: 146 REFSDRDIAILQDFADLAMDELE 168
[111][TOP]
>UniRef100_Q8DJE3 Sensor protein n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DJE3_THEEB
Length = 1353
Score = 130 bits (326), Expect = 7e-29
Identities = 64/140 (45%), Positives = 90/140 (64%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
VLDT PE FD+IT L + + PIAL+SLVD+ RQWFKS G+ +T R +FCA +
Sbjct: 22 VLDTPPEPIFDEITNLAAAICETPIALISLVDRQRQWFKSKVGIDACETPRNVAFCAHVI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + ++++V +A D RF +NP V G P+IRFYAG PLV G +G+LC++D +PRQ
Sbjct: 82 LQD--QLVIVPDARLDPRFADNPFVTGPPYIRFYAGMPLVTPQGYGIGTLCVVDYQPRQL 139
Query: 373 DAESCNMLANMAEMVVREIE 432
+ L +A V+ E+E
Sbjct: 140 NPVQQQTLRTLARQVINELE 159
[112][TOP]
>UniRef100_A1ZZA1 Two-component hybrid sensor and regulator n=1 Tax=Microscilla
marina ATCC 23134 RepID=A1ZZA1_9SPHI
Length = 460
Score = 130 bits (326), Expect = 7e-29
Identities = 62/166 (37%), Positives = 101/166 (60%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
++ T+ E+ FDD+ +L + + PI+L+SLV +D+QWFK+ GL R+T R+ +FCA +
Sbjct: 22 IMGTDFEQEFDDLVKLASHICETPISLMSLVAEDKQWFKAKVGLEPRETPREQAFCAHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
+PE+ +VE+A +D RF +NPLV G+P IRFYAG PL +G LG+LC+ID +PR
Sbjct: 82 --HNPELFIVEDATKDERFHDNPLVTGNPDIRFYAGMPLTTPDGFSLGTLCVIDKRPRDL 139
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQLIRAL 510
L +A V+ ++E +E + +N ++ ++
Sbjct: 140 SEAQKTALKTLASQVIAQLELRLKLETIAHEKRKATEKNQDIVESI 185
[113][TOP]
>UniRef100_A0XYI2 Sensor protein n=1 Tax=Alteromonadales bacterium TW-7
RepID=A0XYI2_9GAMM
Length = 734
Score = 130 bits (326), Expect = 7e-29
Identities = 66/166 (39%), Positives = 104/166 (62%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDTE EK FDD+T+L + PI+L+SLVD RQWFKS G+ +T+R +FC+ +
Sbjct: 22 ILDTEAEKVFDDLTQLASDICDTPISLISLVDPQRQWFKSKYGIDASETERDIAFCSHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + +V ++NAL D RF +NPLV P+IRFYAG PL+ G +G+LC+I +KP++
Sbjct: 82 LQD--QVFEIQNALLDERFHDNPLVTNDPNIRFYAGAPLITPQGSTIGTLCVISDKPKKL 139
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQLIRAL 510
+ + L + + V+ ++E +L + K+ L ++NQ + L
Sbjct: 140 TKKQISALTILGKEVIAQLEL-RLKNRELTKTLELQNQHNQELEKL 184
[114][TOP]
>UniRef100_B2J1J5 Sensor protein n=1 Tax=Nostoc punctiforme PCC 73102
RepID=B2J1J5_NOSP7
Length = 1559
Score = 129 bits (325), Expect = 9e-29
Identities = 65/140 (46%), Positives = 83/140 (59%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT E FDD+T L + PIAL+SL+D DRQWFKS G+ +T R +FCA +
Sbjct: 21 ILDTHSEAAFDDLTHLASYICGTPIALISLIDSDRQWFKSKVGMEALETPRDLAFCAHAI 80
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L PEV VV +A +D RF NPLV P IRFYAG PL G LG+LC+ID PR
Sbjct: 81 L--QPEVFVVPDATQDERFATNPLVTSDPDIRFYAGVPLTNPEGYALGTLCVIDRVPRNL 138
Query: 373 DAESCNMLANMAEMVVREIE 432
E L + V++++E
Sbjct: 139 SPEQVEALRIIGRQVIKQLE 158
[115][TOP]
>UniRef100_A6TIC3 Putative uncharacterized protein n=1 Tax=Klebsiella pneumoniae
subsp. pneumoniae MGH 78578 RepID=A6TIC3_KLEP7
Length = 318
Score = 129 bits (325), Expect = 9e-29
Identities = 66/140 (47%), Positives = 94/140 (67%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
+G+LDT+ E+RFD +TR+ +F PIALVSL+D+DRQWFKS GL +++TDR SFC
Sbjct: 19 MGILDTKYEERFDRLTRIATKLFDVPIALVSLIDRDRQWFKSCYGLKIKETDRSDSFC-- 76
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
T+ + E L+V +A D RF+ N LV P+IRFYAG P+ +G G++CIID +PR
Sbjct: 77 TIAVDLSEPLIVPDASLDPRFKENKLVKNDPYIRFYAGHPVRLPDGEIAGTICIIDTEPR 136
Query: 367 QFDAESCNMLANMAEMVVRE 426
+ +L ++AE+V E
Sbjct: 137 VLTRDDFLLLKDLAEIVEDE 156
[116][TOP]
>UniRef100_Q7U6L9 Putative uncharacterized protein n=1 Tax=Synechococcus sp. WH 8102
RepID=Q7U6L9_SYNPX
Length = 233
Score = 129 bits (324), Expect = 1e-28
Identities = 64/140 (45%), Positives = 94/140 (67%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+L T+PE+ +D+IT + ++ PIAL+SLVD+ RQWFKS G +QT+R SFCA T+
Sbjct: 22 ILGTKPEESYDNITSMAAMICHAPIALISLVDQSRQWFKSRVGCDQQQTERDISFCAHTI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L +P+ L+VE+AL D RF++NPLV P+IR YAG PL N R+G+LC+ID P+
Sbjct: 82 L--NPQPLIVEDALFDQRFQDNPLVREDPNIRLYAGFPLNTPNDQRIGTLCVIDRMPKSL 139
Query: 373 DAESCNMLANMAEMVVREIE 432
+ ++ +A+ VV +E
Sbjct: 140 TSIQIQVMKRLADQVVTLLE 159
[117][TOP]
>UniRef100_Q060H4 GAF n=1 Tax=Synechococcus sp. BL107 RepID=Q060H4_9SYNE
Length = 253
Score = 129 bits (324), Expect = 1e-28
Identities = 66/143 (46%), Positives = 90/143 (62%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+L T+PE+ +DDIT++ L PIAL+SLVD +RQWFKS G+ V +T R SFCA +
Sbjct: 22 ILGTKPEQNYDDITKIASLTCDTPIALLSLVDTNRQWFKSKVGVDVEETVRDWSFCAHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
PE L++E+AL+D RF +NPLV G P IR YAG PL R+G+LC+ID KP
Sbjct: 82 --HSPEPLIIEDALQDERFVDNPLVQGEPQIRLYAGFPLQNDQNHRIGTLCVIDRKPHGL 139
Query: 373 DAESCNMLANMAEMVVREIEKDK 441
C ++ ++A V +E K
Sbjct: 140 TDVQCKIMESLARQAVSFLELRK 162
[118][TOP]
>UniRef100_B5JQD0 Sensor protein n=1 Tax=Verrucomicrobiae bacterium DG1235
RepID=B5JQD0_9BACT
Length = 401
Score = 129 bits (324), Expect = 1e-28
Identities = 62/140 (44%), Positives = 96/140 (68%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDTE E+ FD I +L ++ + PIAL+SL+D++RQWFK+ GL ++T R+ +FCA +
Sbjct: 22 ILDTENEELFDSIAKLAAIICEVPIALISLIDEERQWFKAKVGLDAKETSRELAFCAHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L E E+L+V +A +D RFR+NPLV G+P IRFYAG P+V + LG+LC+ID + R+
Sbjct: 82 L-EPEEMLLVPDATKDKRFRDNPLVTGAPDIRFYAGSPIVTHDRQALGTLCVIDTETREL 140
Query: 373 DAESCNMLANMAEMVVREIE 432
+ L ++++ V +E
Sbjct: 141 SEKQKEALRHLSKQVCANLE 160
[119][TOP]
>UniRef100_A3ITR8 GAF n=1 Tax=Cyanothece sp. CCY0110 RepID=A3ITR8_9CHRO
Length = 238
Score = 129 bits (324), Expect = 1e-28
Identities = 70/167 (41%), Positives = 100/167 (59%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT E+ +DDIT L + PIAL++ VD +RQWFKS GL V QT R SFC+ +
Sbjct: 21 ILDTPSEQAYDDITSLAAFICDVPIALITFVDAERQWFKSKVGLNVAQTSRDVSFCSQCI 80
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L P+++VV++ D RF++NPLV+ P+IRFYAG PL+ + LG+LC+ID +PR+
Sbjct: 81 LS--PDMMVVKDTFLDERFKDNPLVIVDPYIRFYAGVPLLTPDEQPLGTLCVIDRQPREL 138
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQLIRALD 513
N L +A V+ ++E L R ++QL ALD
Sbjct: 139 SESQTNALNALARQVMMQLE--------------LRRVSSQLATALD 171
[120][TOP]
>UniRef100_A0ZB66 Sensor protein n=1 Tax=Nodularia spumigena CCY9414
RepID=A0ZB66_NODSP
Length = 1508
Score = 129 bits (324), Expect = 1e-28
Identities = 64/140 (45%), Positives = 88/140 (62%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT+PE+ FD++TRL + PIALVSLVD +RQWFKS GL +T R +FCA +
Sbjct: 21 ILDTQPEESFDELTRLASYICGTPIALVSLVDTNRQWFKSKVGLEAPETPRDLAFCAHAI 80
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + +V +V + D RF +NPLV P+IRFYAG PL G LG+LC+ID PR
Sbjct: 81 LQK--DVFIVPDTTTDKRFADNPLVTSDPNIRFYAGVPLTNAEGYSLGTLCVIDRVPRNL 138
Query: 373 DAESCNMLANMAEMVVREIE 432
+E L + V++++E
Sbjct: 139 TSEQVEALRILGNQVIKQLE 158
[121][TOP]
>UniRef100_Q3AWZ6 GAF n=1 Tax=Synechococcus sp. CC9902 RepID=Q3AWZ6_SYNS9
Length = 245
Score = 129 bits (323), Expect = 2e-28
Identities = 66/143 (46%), Positives = 90/143 (62%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+L T+PE+ +DDIT++ L PIAL+SLVD +RQWFKS G+ V +T R SFCA +
Sbjct: 22 ILGTKPEQTYDDITKIASLTCDTPIALLSLVDTNRQWFKSKVGVDVEETVRDWSFCAHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
PE L++E+AL+D RF +NPLV G P IR YAG PL R+G+LC+ID KP
Sbjct: 82 --HSPEPLIIEDALQDERFVDNPLVKGDPQIRLYAGFPLQNDQNHRIGTLCVIDRKPHGL 139
Query: 373 DAESCNMLANMAEMVVREIEKDK 441
C ++ ++A V +E K
Sbjct: 140 TDVQCEIMESLARQAVSFLELRK 162
[122][TOP]
>UniRef100_Q319B9 GAF domain n=1 Tax=Prochlorococcus marinus str. MIT 9312
RepID=Q319B9_PROM9
Length = 249
Score = 129 bits (323), Expect = 2e-28
Identities = 63/143 (44%), Positives = 90/143 (62%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+L T+PE +DDIT++ PI+L++LVDKDRQWFKS GL + +T R SFC +
Sbjct: 23 ILGTKPESCYDDITKIAAATCNVPISLMTLVDKDRQWFKSKVGLQISETRRDWSFCTHAI 82
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
P L++ +A +D RF NNPLV G P IRFYAG PL ++G +LG+LC+ID KP
Sbjct: 83 KENSP--LIIHDAFQDERFINNPLVTGDPKIRFYAGFPLKTSDGNKLGTLCVIDRKPGNL 140
Query: 373 DAESCNMLANMAEMVVREIEKDK 441
+ N++ ++ +V +E K
Sbjct: 141 TTQQFNIMELLSRQIVSFLELRK 163
[123][TOP]
>UniRef100_B1WXR8 Putative uncharacterized protein n=1 Tax=Cyanothece sp. ATCC 51142
RepID=B1WXR8_CYAA5
Length = 246
Score = 129 bits (323), Expect = 2e-28
Identities = 72/167 (43%), Positives = 99/167 (59%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT E+ +DDITRL + PIAL++ VD +RQWFKS GL V QT R SFC+ +
Sbjct: 21 ILDTPSEQAYDDITRLATFICDVPIALITFVDAERQWFKSKVGLNVAQTPRDISFCSQCI 80
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + E+++V++ D RF++NPLV P+IRFYAG PL+ N LG+LC+ID KPR
Sbjct: 81 LSQ--EMMLVKDTFLDERFKDNPLVKVDPYIRFYAGIPLLTPNKQPLGTLCVIDRKPRDL 138
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQLIRALD 513
N L +A V+ ++E L R ++QL ALD
Sbjct: 139 SESQKNALEALARQVMIQLE--------------LRRVSSQLATALD 171
[124][TOP]
>UniRef100_Q1NHW6 Sensory box/GGDEF family protein n=1 Tax=Sphingomonas sp. SKA58
RepID=Q1NHW6_9SPHN
Length = 489
Score = 129 bits (323), Expect = 2e-28
Identities = 71/139 (51%), Positives = 90/139 (64%), Gaps = 7/139 (5%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGL-PVRQTDRKSSFCAWT 189
+LDT PE+ FD +T L + CPIALVSLVD+DRQWFKS QGL VR+T R +FCA T
Sbjct: 18 ILDTPPERDFDALTALARRLLDCPIALVSLVDQDRQWFKSAQGLGQVRETPRDQAFCAHT 77
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLR------LGSLCII 351
+ +LV+E+A D RF NPLV+G PHIRFYAG PL + LGSLC+I
Sbjct: 78 I--HQDNLLVIEDASADPRFARNPLVVGKPHIRFYAGVPLRPHHDGHSDMLPGLGSLCVI 135
Query: 352 DNKPRQFDAESCNMLANMA 408
D +PR E ++L ++A
Sbjct: 136 DTQPRALSDEERDILRDLA 154
[125][TOP]
>UniRef100_A6GPF2 Putative uncharacterized protein n=1 Tax=Limnobacter sp. MED105
RepID=A6GPF2_9BURK
Length = 330
Score = 129 bits (323), Expect = 2e-28
Identities = 71/143 (49%), Positives = 91/143 (63%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
LG++ + E RFD ITRL C F ALV++V K+ QWFKS+QGL TDR+ SFC
Sbjct: 20 LGMIYSPSEARFDRITRLVCRHFDIDTALVTIVYKEIQWFKSLQGLNACSTDREVSFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L + P LVVENAL D RF +NPLV+ P IRFYAG P+ G+ +G+LC+ID+ PR
Sbjct: 80 AILSDEP--LVVENALLDPRFMDNPLVVDGPRIRFYAGQPIRDAFGVTIGTLCVIDSVPR 137
Query: 367 QFDAESCNMLANMAEMVVREIEK 435
F E L + A +V EI K
Sbjct: 138 AFSQEDRQDLRDFARLVEVEIAK 160
[126][TOP]
>UniRef100_Q4ZR61 PAS:GGDEF n=1 Tax=Pseudomonas syringae pv. syringae B728a
RepID=Q4ZR61_PSEU2
Length = 732
Score = 128 bits (322), Expect = 2e-28
Identities = 66/145 (45%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
++DT PE +D I ++ +F PI L+SLV +DRQ+FK+ GL V +T R SFC + L
Sbjct: 22 LMDTPPEHEYDQIVQMASRIFDLPIVLISLVHRDRQFFKARVGLDVCETGRDVSFCNFAL 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ- 369
+ + V +V +AL+D RF +N LV+G+PHIRFYAG PL+ +G LGSLC+IDNKPR+
Sbjct: 82 MGRN--VFLVPDALQDERFSSNALVVGAPHIRFYAGAPLITASGHVLGSLCLIDNKPRET 139
Query: 370 FDAESCNMLANMAEMVVREIEKDKL 444
F +L ++A M++ +E +L
Sbjct: 140 FSERDQLVLQDLAVMIIERMELRRL 164
[127][TOP]
>UniRef100_B0UA81 Putative phytochrome sensor protein n=1 Tax=Methylobacterium sp.
4-46 RepID=B0UA81_METS4
Length = 603
Score = 128 bits (322), Expect = 2e-28
Identities = 65/147 (44%), Positives = 91/147 (61%), Gaps = 4/147 (2%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
LG+LDT PE+RFD + L P A +SLVD+DRQWFK+ G P R+T R +S CA
Sbjct: 453 LGLLDTPPEERFDRLVTLAAQSLATPFAALSLVDRDRQWFKAKAGFPFRETPRDASLCAH 512
Query: 187 TLLPEHPE----VLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIID 354
+ LVV + L D RF +NP V+G P++RFYAG PL+ G +G+LC+ D
Sbjct: 513 AVAASDGSGARLPLVVPDTLLDSRFADNPAVVGPPYLRFYAGQPLILAQGHCIGTLCVAD 572
Query: 355 NKPRQFDAESCNMLANMAEMVVREIEK 435
+PR DA+ +L +A++ +REIE+
Sbjct: 573 TRPRFLDADGETLLRWLADLALREIER 599
[128][TOP]
>UniRef100_A8ILU5 Putative signaling protein n=1 Tax=Azorhizobium caulinodans ORS 571
RepID=A8ILU5_AZOC5
Length = 804
Score = 128 bits (322), Expect = 2e-28
Identities = 69/151 (45%), Positives = 99/151 (65%), Gaps = 1/151 (0%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
++DT PE FD + L VF PI LVSL+ +DRQ+FK+ G PV +T R+ SFCA +
Sbjct: 88 LMDTPPEADFDRLAALAARVFDVPIVLVSLLGRDRQFFKASVGFPVCETSREVSFCAHAI 147
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR-Q 369
+ + E+LV+ +A D RFR NPLVLG P IRFYAG PL+A G ++G++C+ID++PR +
Sbjct: 148 MQD--EILVIPDATRDPRFRANPLVLGPPFIRFYAGRPLIAPTGEKVGTVCLIDHEPRFR 205
Query: 370 FDAESCNMLANMAEMVVREIEKDKLIEAQKI 462
F + L ++A M V +E +L A+ I
Sbjct: 206 FTETDRHNLNDLAAMAVDRMELRRLDHARNI 236
[129][TOP]
>UniRef100_Q6XQX3 Putative uncharacterized protein n=1 Tax=Escherichia coli
RepID=Q6XQX3_ECOLX
Length = 324
Score = 128 bits (322), Expect = 2e-28
Identities = 69/172 (40%), Positives = 100/172 (58%), Gaps = 4/172 (2%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LDT ++RF+ +TRL F+ P+AL+SL+D++RQW + QG+ VR+T R SFC
Sbjct: 21 GLLDTRDDERFERLTRLARKAFQVPVALISLLDRERQWLLACQGVGVRETPRNISFCGHA 80
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
+L E P +V +A D RFR+NPLV G PHIRFYAG P+ +G G+LC+I PR
Sbjct: 81 ILQEGP--FIVHDAAADERFRDNPLVTGEPHIRFYAGQPVSLPDGTVAGTLCLIHTVPRA 138
Query: 370 FDAESCNMLANMAEMVVREIEKDKLIEAQKI----KSEMLYRENNQLIRALD 513
F + L ++A +V E E + + YR +L RA++
Sbjct: 139 FTDDDIASLRDLACIVEDEFEAISMAMTDSLTGIPNRRGFYRAGEKLFRAMN 190
[130][TOP]
>UniRef100_C6N7L9 Putative uncharacterized protein n=1 Tax=Legionella drancourtii
LLAP12 RepID=C6N7L9_9GAMM
Length = 314
Score = 128 bits (322), Expect = 2e-28
Identities = 65/152 (42%), Positives = 99/152 (65%), Gaps = 1/152 (0%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT E+RFD I + +F P+ALVSLVD +R+WFKS G +++T R SF A
Sbjct: 20 LHILDTNSEERFDSIIHVAQHLFHVPMALVSLVDTEREWFKSRCGFQLKETPRDISFGAH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP- 363
+L E ++++V+++L D+RF +NPLV+G P IRFY GCPL + +G+LC+ID KP
Sbjct: 80 VILQE--DIMIVKDSLNDVRFSDNPLVIGEPDIRFYLGCPLKTKDRFNIGTLCLIDQKPQ 137
Query: 364 RQFDAESCNMLANMAEMVVREIEKDKLIEAQK 459
+Q++ ++ ++A MV E+E +L K
Sbjct: 138 QQYNGVDLGIIKDLATMVESELETMRLSTRDK 169
[131][TOP]
>UniRef100_Q3ALH2 GAF n=1 Tax=Synechococcus sp. CC9605 RepID=Q3ALH2_SYNSC
Length = 240
Score = 128 bits (321), Expect = 3e-28
Identities = 67/140 (47%), Positives = 88/140 (62%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+L T+PEK FD+ITR+ + + PIAL+SLVD+ RQWFKS GL +TDR SFCA T+
Sbjct: 22 ILGTKPEKAFDNITRMASEICQSPIALISLVDEKRQWFKSKVGLEASETDRDISFCAHTI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L P LVVE+AL +FR+NPLV PHIR YAG PL R+G+LC+ID P+
Sbjct: 82 LDSKP--LVVEDALFHEKFRDNPLVQEEPHIRLYAGFPLKTDINHRIGTLCVIDRIPKSL 139
Query: 373 DAESCNMLANMAEMVVREIE 432
++ +AE +E
Sbjct: 140 TNSQYKVMEGLAEQATTLLE 159
[132][TOP]
>UniRef100_A4Y0E3 Sensor protein n=1 Tax=Pseudomonas mendocina ymp RepID=A4Y0E3_PSEMY
Length = 640
Score = 128 bits (321), Expect = 3e-28
Identities = 69/137 (50%), Positives = 87/137 (63%), Gaps = 1/137 (0%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT E FD IT L + + PIAL+SLVD RQWFKS GL QT R+ +FCA
Sbjct: 20 LELLDTPAEAMFDHITALAAQICETPIALISLVDAQRQWFKSRVGLDAEQTARELAFCAH 79
Query: 187 TLLPEHPEVLV-VENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+ H + L+ V NAL+D RFR+NPLV P IRFYAG PL GL LG+LC+ID +P
Sbjct: 80 AV---HADALLEVGNALDDARFRDNPLVTSDPSIRFYAGMPLHDGQGLALGTLCVIDRRP 136
Query: 364 RQFDAESCNMLANMAEM 414
RQ D L ++A++
Sbjct: 137 RQLDEHQRQQLRHLAQL 153
[133][TOP]
>UniRef100_A2BY81 GAF domain n=1 Tax=Prochlorococcus marinus str. MIT 9515
RepID=A2BY81_PROM5
Length = 238
Score = 128 bits (321), Expect = 3e-28
Identities = 62/143 (43%), Positives = 92/143 (64%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+L T+PE +DDIT++ PI+L++LVD+D+QWFKS GL + +T R SFC +
Sbjct: 23 ILGTKPESCYDDITKIAASTCNVPISLMTLVDRDKQWFKSKVGLEISETKRDWSFCTHAI 82
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
P L++E+A +D RF NNPLV G P IRFYAG PL ++G +LG+LC+ID KP
Sbjct: 83 QENSP--LIIEDAFQDERFINNPLVTGDPKIRFYAGFPLKNSDGNKLGTLCVIDRKPGNL 140
Query: 373 DAESCNMLANMAEMVVREIEKDK 441
+ N++ +++ +V +E K
Sbjct: 141 SSNQYNVMELLSKQIVSFLELRK 163
[134][TOP]
>UniRef100_Q1VSB1 Sensor protein n=1 Tax=Psychroflexus torquis ATCC 700755
RepID=Q1VSB1_9FLAO
Length = 405
Score = 128 bits (321), Expect = 3e-28
Identities = 67/164 (40%), Positives = 95/164 (57%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT PE+ +D IT+L + PIA++SL+DKDRQWFKS G +TDR+ SFC
Sbjct: 20 LNILDTLPEQDYDQITKLVSFICDTPIAMISLIDKDRQWFKSKVGADYCETDREYSFCNI 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ + E++ V +A +D RF NPLV G + FYAG PL NG LG+LC++D++PR
Sbjct: 80 AIQSDE-EIMEVFDARDDFRFNGNPLVYGDKKVIFYAGVPLKDKNGFALGTLCVVDHQPR 138
Query: 367 QFDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQL 498
+ L +A V R E + + K + L +N QL
Sbjct: 139 TLSEKQKESLMFLANQVTRLFELQSINDGLKETQKQLKEKNIQL 182
[135][TOP]
>UniRef100_D0CHH4 GAF domain protein n=1 Tax=Synechococcus sp. WH 8109
RepID=D0CHH4_9SYNE
Length = 240
Score = 128 bits (321), Expect = 3e-28
Identities = 67/140 (47%), Positives = 88/140 (62%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+L T+PEK FD+ITR+ + + PIAL+SLVD+ RQWFKS GL +T R SFCA T+
Sbjct: 22 ILGTKPEKAFDNITRMASEICQSPIALISLVDEKRQWFKSKVGLEASETTRDISFCAHTI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L P LVVE+AL D +FR+NPLV PHIR YAG PL R+G+LC+ID P+
Sbjct: 82 LDSKP--LVVEDALFDEKFRDNPLVQEEPHIRLYAGFPLKTDINHRIGTLCVIDRIPKSL 139
Query: 373 DAESCNMLANMAEMVVREIE 432
++ +AE +E
Sbjct: 140 TNSQYKVMEGLAEQATTLLE 159
[136][TOP]
>UniRef100_C9Y4F4 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis
RepID=C9Y4F4_9ENTR
Length = 329
Score = 128 bits (321), Expect = 3e-28
Identities = 64/139 (46%), Positives = 88/139 (63%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LD P +RFD +TRL +F P+AL+SLVD+++ WF S G+ + R SFC T
Sbjct: 27 GLLDAAPTERFDRLTRLAKRLFNAPVALISLVDQEQLWFASCDGVEPKPIPRNVSFCGHT 86
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
+L P L++ +AL D RF +N LV G PHIRFYAGCP+ +G GSLCIID +PR+
Sbjct: 87 ILNNAP--LIITDALSDERFHDNALVNGPPHIRFYAGCPVQLPDGATAGSLCIIDTEPRE 144
Query: 370 FDAESCNMLANMAEMVVRE 426
F +L ++A +V E
Sbjct: 145 FSEADTLLLRDLAAIVEDE 163
[137][TOP]
>UniRef100_Q8PHC3 Sensor protein n=1 Tax=Xanthomonas axonopodis pv. citri
RepID=Q8PHC3_XANAC
Length = 453
Score = 127 bits (320), Expect = 4e-28
Identities = 67/141 (47%), Positives = 87/141 (61%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LDT E F+DITRL ++ + PIAL+SLVD DRQWFKS G+ R+T S CA
Sbjct: 88 GILDTPREAAFEDITRLASIICQTPIALISLVDADRQWFKSELGMGERETPLFKSMCAHA 147
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
LL +VLVV + EDIRF NPLV G + FYAG L +GL LG++C++D KPRQ
Sbjct: 148 LLDN--DVLVVPDTREDIRFARNPLVTGEAPLHFYAGALLKTPDGLPLGTVCVLDRKPRQ 205
Query: 370 FDAESCNMLANMAEMVVREIE 432
E L +A + ++E
Sbjct: 206 LTDEQVEALRALARQTMAQLE 226
[138][TOP]
>UniRef100_C4XD98 Putative uncharacterized protein n=2 Tax=Klebsiella pneumoniae
RepID=C4XD98_KLEPN
Length = 324
Score = 127 bits (320), Expect = 4e-28
Identities = 68/172 (39%), Positives = 99/172 (57%), Gaps = 4/172 (2%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LDT ++RF+ +TRL F+ P+AL+SL+D++RQW + QG+ VR+T R SFC
Sbjct: 21 GLLDTRDDERFERLTRLARKAFQVPVALISLLDRERQWLLACQGVGVRETPRDISFCGHA 80
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
+L E P ++ +A D RF +NPLV G PHIRFYAG P+ +G G+LC+I PR
Sbjct: 81 ILQEGP--FIIHDAAADARFHDNPLVTGEPHIRFYAGQPVSLPDGTVAGTLCLIHTVPRA 138
Query: 370 FDAESCNMLANMAEMVVREIEKDKLIEAQKI----KSEMLYRENNQLIRALD 513
F E L ++A +V E E + + YR +L RA++
Sbjct: 139 FTDEDIASLRDLACIVEDEFEAISMAMTDSLTGIPNRRGFYRAGEKLFRAMN 190
[139][TOP]
>UniRef100_B8L378 Diguanylate cyclase (Ggdef domain) with gaf sensor n=1
Tax=Stenotrophomonas sp. SKA14 RepID=B8L378_9GAMM
Length = 356
Score = 127 bits (320), Expect = 4e-28
Identities = 63/159 (39%), Positives = 102/159 (64%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LD+E EK FDD+ + V +A V+L+D +RQWFKS+QG+ + R S C +
Sbjct: 22 ILDSEREKSFDDLVVIAKAVCGTSMAAVTLIDVERQWFKSIQGIDAAENLRSESMCGHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + +++VVE+A +DIRF +NP+V G PH+RFYAG PL++++GL LG+LC+ D P++
Sbjct: 82 L-QPQQIMVVEDAQQDIRFHDNPVVTGDPHVRFYAGAPLISSDGLPLGTLCVFDAHPQRL 140
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYREN 489
++ LA ++ V+ +E + A I+ ML R++
Sbjct: 141 ASDKAEALAALSRQVMLVMELRRF--ALDIQKHMLERDD 177
[140][TOP]
>UniRef100_B3X2L1 Diguanylate cyclase n=1 Tax=Shigella dysenteriae 1012
RepID=B3X2L1_SHIDY
Length = 324
Score = 127 bits (320), Expect = 4e-28
Identities = 68/172 (39%), Positives = 100/172 (58%), Gaps = 4/172 (2%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LDT ++RF+ +TRL F+ P+AL+SL+D++RQW + QG+ VR+T R SFC
Sbjct: 21 GLLDTRDDERFERLTRLARKAFQVPVALISLLDRERQWLFACQGVGVRETPRDISFCGHA 80
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
+L E P ++ +A D RF +NPLV G PHIRFYAG P+ +G G+LC+I PR
Sbjct: 81 ILQEGP--FIIHDAAADARFHDNPLVTGEPHIRFYAGQPVSLPDGTVAGTLCLIHTVPRA 138
Query: 370 FDAESCNMLANMAEMVVREIEKDKLIEAQKI----KSEMLYRENNQLIRALD 513
F E L ++A +V E E + + YR ++L RA++
Sbjct: 139 FTDEDIASLRDLACIVEDEFEAINMAMTDSLTGIPNRRGFYRAGDKLFRAMN 190
[141][TOP]
>UniRef100_UPI0001AEBC9A GGDEF domain-containing PAS signal transduction protein n=1
Tax=Alteromonas macleodii ATCC 27126 RepID=UPI0001AEBC9A
Length = 777
Score = 127 bits (319), Expect = 5e-28
Identities = 65/146 (44%), Positives = 92/146 (63%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
KL VLDT PE+RFD ITRL +F C A V+ VD RQWFKS L + +T+R +FCA
Sbjct: 19 KLRVLDTPPEERFDRITRLASSIFDCRFASVTFVDDSRQWFKSAINLDMTETERDVAFCA 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+ + + LVV + ED RF++NP V+G PHIRFYAG L+ G +G+LC+ DN P
Sbjct: 79 HAIAQD--KTLVVPDTQEDPRFKSNPFVVGHPHIRFYAGVRLM-IEGFAVGTLCVSDNNP 135
Query: 364 RQFDAESCNMLANMAEMVVREIEKDK 441
+ F+ L +A++V E+++ +
Sbjct: 136 KIFNCVQIQQLEQLAKLVESELQRQE 161
[142][TOP]
>UniRef100_Q7V0A0 GAF domain n=1 Tax=Prochlorococcus marinus subsp. pastoris str.
CCMP1986 RepID=Q7V0A0_PROMP
Length = 250
Score = 127 bits (319), Expect = 5e-28
Identities = 62/143 (43%), Positives = 91/143 (63%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+L T+PE +DDIT++ PI+L++LVDKD+QWFKS GL + +T R SFC +
Sbjct: 24 ILGTKPESCYDDITKIAASTCNVPISLMTLVDKDKQWFKSKVGLEINETKRDWSFCTHAI 83
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
P L++++A +D RF NNPLV G P IRFYAG PL +G +LG+LC+ID KP
Sbjct: 84 QENSP--LIIQDAFQDERFINNPLVTGDPKIRFYAGFPLKNRDGNKLGTLCVIDRKPGNL 141
Query: 373 DAESCNMLANMAEMVVREIEKDK 441
+ N++ +++ +V +E K
Sbjct: 142 SLKQFNVMELLSKQIVAFLELRK 164
[143][TOP]
>UniRef100_Q3BPX9 Sensor protein n=1 Tax=Xanthomonas campestris pv. vesicatoria str.
85-10 RepID=Q3BPX9_XANC5
Length = 453
Score = 127 bits (319), Expect = 5e-28
Identities = 69/160 (43%), Positives = 96/160 (60%), Gaps = 4/160 (2%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LDT E F+DITRL ++ + PIAL+SLVD DRQWFKS G+ R+T S CA
Sbjct: 88 GILDTPREAAFEDITRLASIICQTPIALISLVDADRQWFKSELGMGERETPLFKSMCAHA 147
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
LL +VLVV + EDIRF NPLV G + FYAG L +GL LG++C++D KPRQ
Sbjct: 148 LLDN--DVLVVPDTREDIRFSRNPLVTGEAPLYFYAGALLKTPDGLPLGTVCVLDRKPRQ 205
Query: 370 FDAESCNMLANMAEMVVREIEKDKLI----EAQKIKSEML 477
E L +A + ++E + + E+ + +S ++
Sbjct: 206 LTDEQVEALRALARQTMAQLELRRALAIAEESDRYRSRLM 245
[144][TOP]
>UniRef100_C1F5G2 GAF domain/GGDEF domain protein n=1 Tax=Acidobacterium capsulatum
ATCC 51196 RepID=C1F5G2_ACIC5
Length = 369
Score = 127 bits (319), Expect = 5e-28
Identities = 68/172 (39%), Positives = 104/172 (60%), Gaps = 6/172 (3%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT E +DD+TRL V P+A ++LVD+DRQWFKS G+ ++T R SFCA
Sbjct: 19 LYILDTPSEAAYDDLTRLAAYVCDAPMATITLVDEDRQWFKSRIGITAQETPRSVSFCAH 78
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ E+ VV +A +D RF +PLVL P+IRFYAG P+V+ G +G++C++D KPR
Sbjct: 79 AIAQN--ELFVVPDATKDARFSGSPLVLDDPNIRFYAGMPIVSPEGFHVGTMCVLDKKPR 136
Query: 367 QFDAESCNMLANMAEMVVREIE-KDKLIE-----AQKIKSEMLYRENNQLIR 504
+ E L +A V + + + +L+E A++ K+E RE+ ++
Sbjct: 137 ELTEEKQVALRVLARQVAAQFQMRRQLLELREARAKQAKTEQRLRESQTRLK 188
[145][TOP]
>UniRef100_A9B911 Putative PAS/PAC sensor protein n=1 Tax=Herpetosiphon aurantiacus
ATCC 23779 RepID=A9B911_HERA2
Length = 694
Score = 127 bits (319), Expect = 5e-28
Identities = 69/159 (43%), Positives = 103/159 (64%), Gaps = 2/159 (1%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
LG+LDT P+ RFD +TRL +F PI L+SLVD +RQWFKS GL V+Q+ R+ SFCA
Sbjct: 20 LGILDTPPDPRFDRLTRLAQRLFHVPIVLISLVDTNRQWFKSCIGLDVQQSSREISFCAH 79
Query: 187 TLL-PEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+L P+ P L++ + D RF +NP+V G+PHIRFYAG L A +G +G+LC++D
Sbjct: 80 AILQPDRP--LIILDTWCDTRFADNPVVSGTPHIRFYAGHVLHAPSGAAVGTLCLLDTVV 137
Query: 364 RQ-FDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEML 477
F + +LA++A +V RE+ + + E + + ++
Sbjct: 138 HSVFSDDDQEILADLAMLVERELAANTMHELLQTQHRLM 176
[146][TOP]
>UniRef100_A3PEK5 GAF domain-containing protein n=1 Tax=Prochlorococcus marinus str.
MIT 9301 RepID=A3PEK5_PROM0
Length = 249
Score = 127 bits (319), Expect = 5e-28
Identities = 62/143 (43%), Positives = 91/143 (63%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+L T+PE +DDIT++ PI+L++LVDKD+QWFKS GL + +T R SFC +
Sbjct: 23 ILGTKPESCYDDITKIAATTCNVPISLMTLVDKDKQWFKSKIGLQISETRRDRSFCTHAI 82
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
P L++ +A +D RF NNPLV G P IRFYAG PL ++G +LG+LC+ID KP
Sbjct: 83 KENSP--LIIHDAFQDERFINNPLVTGDPKIRFYAGFPLRNSDGNKLGTLCVIDRKPGNL 140
Query: 373 DAESCNMLANMAEMVVREIEKDK 441
+ N++ +++ +V +E K
Sbjct: 141 TTQQFNIMELLSKQIVSFLELRK 163
[147][TOP]
>UniRef100_Q1MZA9 Sensor protein n=1 Tax=Bermanella marisrubri RepID=Q1MZA9_9GAMM
Length = 400
Score = 127 bits (319), Expect = 5e-28
Identities = 66/169 (39%), Positives = 101/169 (59%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L VLDT+ E D++T L + PI+L+SL+D DRQWFKS +GL +T R+ +FC+
Sbjct: 19 RLEVLDTDDESALDELTELASEICGTPISLISLIDSDRQWFKSRKGLDADETSREVAFCS 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+L + EV V NA D RF +NPLV G+P IRFYAG PLV +G+ +G+LC+ID +
Sbjct: 79 HAILQD--EVFEVPNAATDERFHDNPLVTGAPDIRFYAGAPLVTESGMPIGTLCVIDTET 136
Query: 364 RQFDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQLIRAL 510
+ L +A V+ ++E + + + E L +E +Q+ +
Sbjct: 137 HKLTEHQTRALKILANQVISQLE----LRLKHRQLEHLNKERDQIFAVM 181
[148][TOP]
>UniRef100_C4D170 Sensor protein n=1 Tax=Spirosoma linguale DSM 74 RepID=C4D170_9SPHI
Length = 1309
Score = 127 bits (319), Expect = 5e-28
Identities = 65/154 (42%), Positives = 101/154 (65%), Gaps = 4/154 (2%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT P+K FD +T L L+ + PI+L++L+D+DRQWFKS GL + +T R+ +FC +T+
Sbjct: 18 ILDTLPQKEFDRLTELASLICQTPISLITLLDQDRQWFKSRIGLNLSETKREIAFCRYTI 77
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L E + +E+A D RF NPLVL P IRFYAG PL NG LG++C++D PR+
Sbjct: 78 LEE--GLTEIEDATLDSRFSENPLVLSDPSIRFYAGYPLTDPNGFTLGTICVLDKVPRKL 135
Query: 373 ---DAESCNMLANMA-EMVVREIEKDKLIEAQKI 462
E+ +LA A E+++R + +++I +++
Sbjct: 136 SPTQQEALRVLAETAIELIIRRRQTEEIIYVKQL 169
[149][TOP]
>UniRef100_UPI0001692DB7 sensor histidine kinase n=1 Tax=Xanthomonas oryzae pv. oryzicola
BLS256 RepID=UPI0001692DB7
Length = 398
Score = 127 bits (318), Expect = 6e-28
Identities = 68/148 (45%), Positives = 89/148 (60%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LDT E F+DITRL ++ + PIAL+SLVD DRQWFKS G+ R+T S CA
Sbjct: 33 GILDTPREAAFEDITRLASIICQTPIALISLVDADRQWFKSELGMGERETPLFKSICAHA 92
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
LL +VLVV + EDIRF NPLV G + FYAG L +GL LG++C++D KPRQ
Sbjct: 93 LLDN--DVLVVPDTREDIRFSRNPLVTGEAPLYFYAGALLKTPDGLPLGTVCVLDRKPRQ 150
Query: 370 FDAESCNMLANMAEMVVREIEKDKLIEA 453
E L +A + +E + + A
Sbjct: 151 LTDEQVEALRALARQTMAHLELRRALAA 178
[150][TOP]
>UniRef100_Q2P0G7 Sensor protein n=2 Tax=Xanthomonas oryzae pv. oryzae
RepID=Q2P0G7_XANOM
Length = 398
Score = 127 bits (318), Expect = 6e-28
Identities = 68/148 (45%), Positives = 89/148 (60%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LDT E F+DITRL ++ + PIAL+SLVD DRQWFKS G+ R+T S CA
Sbjct: 33 GILDTPREAAFEDITRLASIICQTPIALISLVDADRQWFKSELGMGERETPLFKSICAHA 92
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
LL +VLVV + EDIRF NPLV G + FYAG L +GL LG++C++D KPRQ
Sbjct: 93 LLDN--DVLVVPDTREDIRFSRNPLVTGEAPLYFYAGALLKTPDGLPLGTVCVLDRKPRQ 150
Query: 370 FDAESCNMLANMAEMVVREIEKDKLIEA 453
E L +A + +E + + A
Sbjct: 151 ITDEQVEALRALARQTMAHLELRRALAA 178
[151][TOP]
>UniRef100_B2SI10 Sensor protein n=1 Tax=Xanthomonas oryzae pv. oryzae PXO99A
RepID=B2SI10_XANOP
Length = 398
Score = 127 bits (318), Expect = 6e-28
Identities = 68/148 (45%), Positives = 89/148 (60%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LDT E F+DITRL ++ + PIAL+SLVD DRQWFKS G+ R+T S CA
Sbjct: 33 GILDTPREAAFEDITRLASIICQTPIALISLVDADRQWFKSELGMGERETPLFKSICAHA 92
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
LL +VLVV + EDIRF NPLV G + FYAG L +GL LG++C++D KPRQ
Sbjct: 93 LLDN--DVLVVPDTREDIRFSRNPLVTGEAPLYFYAGALLKTPDGLPLGTVCVLDRKPRQ 150
Query: 370 FDAESCNMLANMAEMVVREIEKDKLIEA 453
E L +A + +E + + A
Sbjct: 151 ITDEQVEALRALARQTMAHLELRRALAA 178
[152][TOP]
>UniRef100_A3UFL0 GAF sensor diguanylate cyclase n=1 Tax=Oceanicaulis alexandrii
HTCC2633 RepID=A3UFL0_9RHOB
Length = 341
Score = 127 bits (318), Expect = 6e-28
Identities = 64/140 (45%), Positives = 90/140 (64%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
VLDTE E+ F+ + L + + PI VSLVD DRQWFK+ +GL V +T+R +FC++ +
Sbjct: 26 VLDTEVERPFETVVSLVEDILEVPICAVSLVDADRQWFKAKRGLAVCETERDIAFCSYAI 85
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
E P +VV +A ED RF NPLV G PH+R Y G PLV+ +G ++G+LC +D +PR F
Sbjct: 86 EQEEP--MVVPDATEDPRFSANPLVTGDPHLRAYVGVPLVSPDGYQVGTLCAMDVRPRDF 143
Query: 373 DAESCNMLANMAEMVVREIE 432
+L A +VV E+E
Sbjct: 144 SDHELKILRKFARLVVDELE 163
[153][TOP]
>UniRef100_A2U1Y4 Sensor protein n=1 Tax=Polaribacter sp. MED152 RepID=A2U1Y4_9FLAO
Length = 404
Score = 127 bits (318), Expect = 6e-28
Identities = 64/155 (41%), Positives = 98/155 (63%), Gaps = 1/155 (0%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LD+ PE+ +D I ++ + PIAL+SL+DKDRQWFK+ GL R+T R +FCA ++
Sbjct: 22 ILDSLPEEDYDAIAKIASSICNTPIALISLIDKDRQWFKANHGLDARETPRDFAFCAHSI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L E E+ ++ +A +D RF +NPL G P++ FYAG PL +G LG+LC+IDN+P+
Sbjct: 82 L-EPDELFIINDATKDDRFFDNPLTTGDPNVIFYAGAPLNTEDGYPLGTLCVIDNEPKTL 140
Query: 373 DAESCNMLANMAEMVVREIE-KDKLIEAQKIKSEM 474
+ E L +A VV +E + K E + + E+
Sbjct: 141 NEEQKEALKLLANQVVNLLELRKKNRELENVNKEV 175
[154][TOP]
>UniRef100_C6WVC8 Diguanylate cyclase with PAS/PAC and GAF sensors n=1
Tax=Methylotenera mobilis JLW8 RepID=C6WVC8_METML
Length = 737
Score = 126 bits (317), Expect = 8e-28
Identities = 66/153 (43%), Positives = 97/153 (63%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LD+ PE+ FDD+ L + K PIA+++L+D+ RQWFKS GL +T R+ SFC
Sbjct: 20 LNILDSLPEQSFDDLATLASEICKTPIAIITLLDESRQWFKSKVGLTATETPREISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L ++ + NAL+D RF +NPLV G+P+IRFYAG PLV++ LG+LC+ID K R
Sbjct: 80 AILGN--DIFEIPNALDDDRFIDNPLVTGNPNIRFYAGIPLVSSVNYALGTLCVIDQKAR 137
Query: 367 QFDAESCNMLANMAEMVVREIEKDKLIEAQKIK 465
+ E + L + +V IE I+ QK++
Sbjct: 138 ELSEEQRHSLKKLGRLVEALIE--ARIQYQKLQ 168
[155][TOP]
>UniRef100_A9WA16 Diguanylate cyclase n=2 Tax=Chloroflexus RepID=A9WA16_CHLAA
Length = 370
Score = 126 bits (317), Expect = 8e-28
Identities = 71/171 (41%), Positives = 107/171 (62%), Gaps = 4/171 (2%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE+ F+DI R+ + + PIALV+LVD+ RQW + G + +R +FCA+T+
Sbjct: 34 ILDTLPEQIFEDIVRIAAYICQTPIALVNLVDRHRQWSMARLGFSDGEVERTLTFCAFTI 93
Query: 193 L-PEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
P+H V+VV +A D RF +NP V P+IRFYAG PLV ++G LG++C+ID +PRQ
Sbjct: 94 NDPDH--VMVVPDATRDPRFASNPYVRREPYIRFYAGAPLVTSHGYALGTVCVIDLQPRQ 151
Query: 370 FDAESCNMLANMAEMVVR--EIEKDKL-IEAQKIKSEMLYRENNQLIRALD 513
E ML ++ VV EI +D L +E + ++ E Y N +++L+
Sbjct: 152 LSPEQLEMLRLLSRQVVTQLEIRRDLLRLEQRLLQREQEYLSLNAYLQSLE 202
[156][TOP]
>UniRef100_A9VWI8 Diguanylate cyclase n=1 Tax=Methylobacterium extorquens PA1
RepID=A9VWI8_METEP
Length = 1428
Score = 126 bits (317), Expect = 8e-28
Identities = 70/145 (48%), Positives = 91/145 (62%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L V + E ++D I R +F IALVSLV + Q FK GL V T R+ SFC +
Sbjct: 18 LEVFSSPAEPQYDAICRTAQALFGASIALVSLVGETEQRFKGRCGLNVSGTSREVSFCTY 77
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
T+L + +VL+VE+AL+D RF NPLV G PHIRFYAG PLV G+ LGSLC+ID PR
Sbjct: 78 TILSD--QVLLVEDALQDERFSANPLVTGEPHIRFYAGAPLVLGAGIHLGSLCLIDRVPR 135
Query: 367 QFDAESCNMLANMAEMVVREIEKDK 441
F AE L ++A++VV ++ K
Sbjct: 136 SFSAEQQEQLRDLAQIVVAQLRLSK 160
[157][TOP]
>UniRef100_A8G6I2 GAF domain n=1 Tax=Prochlorococcus marinus str. MIT 9215
RepID=A8G6I2_PROM2
Length = 249
Score = 126 bits (317), Expect = 8e-28
Identities = 62/143 (43%), Positives = 91/143 (63%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+L T+PE +DDIT++ PI+L++LVDKD+QWFKS GL + +T R SFC +
Sbjct: 23 ILGTKPESCYDDITKIAATTCNVPISLMTLVDKDKQWFKSKIGLQISETRRDWSFCTHAI 82
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
P L++ +A +D RF NNPLV G P IRFYAG PL ++G +LG+LC+ID KP
Sbjct: 83 KENSP--LIIHDAFQDERFINNPLVTGDPKIRFYAGFPLRNSDGNKLGTLCVIDRKPGNL 140
Query: 373 DAESCNMLANMAEMVVREIEKDK 441
+ N++ +++ +V +E K
Sbjct: 141 TTQQFNIMELLSKQIVSFLELRK 163
[158][TOP]
>UniRef100_A2BSU4 GAF domain-containing protein n=1 Tax=Prochlorococcus marinus str.
AS9601 RepID=A2BSU4_PROMS
Length = 249
Score = 126 bits (317), Expect = 8e-28
Identities = 62/143 (43%), Positives = 91/143 (63%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+L T+PE +DDIT++ PI+L++LVDKD+QWFKS GL + +T R SFC +
Sbjct: 23 ILGTKPESCYDDITKIAATTCNVPISLMTLVDKDKQWFKSKIGLQISETRRDWSFCTHAI 82
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
P L++ +A +D RF NNPLV G P IRFYAG PL ++G +LG+LC+ID KP
Sbjct: 83 KENSP--LIIHDAFQDERFINNPLVTGDPKIRFYAGFPLRNSDGNKLGTLCVIDRKPGNL 140
Query: 373 DAESCNMLANMAEMVVREIEKDK 441
+ N++ +++ +V +E K
Sbjct: 141 TTQQFNIMELLSKQIVSFLELRK 163
[159][TOP]
>UniRef100_C5AK43 Putative GAF sensor protein n=1 Tax=Burkholderia glumae BGR1
RepID=C5AK43_BURGB
Length = 372
Score = 126 bits (317), Expect = 8e-28
Identities = 68/155 (43%), Positives = 98/155 (63%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G++D+ E FDD RL VF PIAL+SLV DRQWFK+ GL VR+T R +FC +T
Sbjct: 220 GLVDSPYEDIFDDTARLAARVFSAPIALISLVTTDRQWFKAHHGLGVRETPRIWAFCNYT 279
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
+L + VVE+A +D RF++N LV G+P IRFYAG PL ++G LGSLC+ID PR+
Sbjct: 280 ILGDS---FVVEDAQQDSRFKDNVLVTGAPQIRFYAGAPLRDSDGYALGSLCVIDQVPRK 336
Query: 370 FDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEM 474
+ L +A+++ ++ AQK++ ++
Sbjct: 337 ASDTGMDALRLLADLI-----SSRICLAQKLREQL 366
[160][TOP]
>UniRef100_C4ZM83 Sensor protein n=1 Tax=Thauera sp. MZ1T RepID=C4ZM83_THASP
Length = 878
Score = 126 bits (317), Expect = 8e-28
Identities = 69/142 (48%), Positives = 87/142 (61%), Gaps = 3/142 (2%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT E FD++ +L +F PIALVSLVD RQWFKS GL V QT R SFC
Sbjct: 20 LAILDTPREDAFDNLMQLAASIFGVPIALVSLVDDARQWFKSAHGLCVAQTPRDVSFCTH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ P LVVE+A D RF +NPLV +P +RFYAG PL + G LG+LC+ID PR
Sbjct: 80 VVFSNAP--LVVEDAARDPRFADNPLVTAAPQVRFYAGEPLRSDQGFVLGTLCVIDTVPR 137
Query: 367 QFDAES---CNMLANMAEMVVR 423
+F+ +LA AE ++R
Sbjct: 138 RFEEAERARLRLLARQAEQLIR 159
[161][TOP]
>UniRef100_B9P3H6 GAF domain-containing protein n=1 Tax=Prochlorococcus marinus str.
MIT 9202 RepID=B9P3H6_PROMA
Length = 249
Score = 126 bits (317), Expect = 8e-28
Identities = 62/143 (43%), Positives = 91/143 (63%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+L T+PE +DDIT++ PI+L++LVDKD+QWFKS GL + +T R SFC +
Sbjct: 23 ILGTKPESCYDDITKIAATTCNVPISLMTLVDKDKQWFKSKIGLQISETRRDWSFCTHAI 82
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
P L++ +A +D RF NNPLV G P IRFYAG PL ++G +LG+LC+ID KP
Sbjct: 83 KENSP--LIIHDAFQDERFINNPLVTGDPKIRFYAGFPLRNSDGNKLGTLCVIDRKPGNL 140
Query: 373 DAESCNMLANMAEMVVREIEKDK 441
+ N++ +++ +V +E K
Sbjct: 141 TTQQFNIMELLSKQIVSFLELRK 163
[162][TOP]
>UniRef100_Q1GWG1 Signal transduction histidine kinase n=1 Tax=Sphingopyxis
alaskensis RepID=Q1GWG1_SPHAL
Length = 514
Score = 126 bits (316), Expect = 1e-27
Identities = 71/156 (45%), Positives = 92/156 (58%), Gaps = 1/156 (0%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT E FD +T+L +F PIAL+SLVD RQWFKS GL V +T R SFC +
Sbjct: 48 LLDTGAEAAFDRVTKLVADLFDAPIALISLVDDCRQWFKSAHGLDVPETPRDISFCKHVV 107
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR-Q 369
E P L+V +A D RF++NPLV G P+IRFY G PL A NG LG+LCIID KPR
Sbjct: 108 EDEQP--LIVGDAASDPRFQDNPLVTGEPYIRFYGGVPLFAYNGAILGTLCIIDRKPRPA 165
Query: 370 FDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEML 477
L + A +V+ E + +++ + ML
Sbjct: 166 LSFREVERLQDFAALVMAEADLRRIVGERDEARRML 201
[163][TOP]
>UniRef100_B2UI26 Diguanylate cyclase with GAF sensor n=2 Tax=Ralstonia pickettii
RepID=B2UI26_RALPJ
Length = 348
Score = 126 bits (316), Expect = 1e-27
Identities = 66/149 (44%), Positives = 91/149 (61%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+L T E+ FD +TR VF PI LVSL+D RQWFKS GL VR+T R SFC +
Sbjct: 22 LLSTPDEELFDRVTRTTKRVFDAPIVLVSLIDAQRQWFKSCIGLNVRETGRDISFCGHAV 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
+ ++LV+ + D RF +NPLV G+PHIRFYAG P+ +G +G+LC++D KPR F
Sbjct: 82 AED--QMLVIPDTKADPRFADNPLVTGAPHIRFYAGRPVRNLSGYAVGTLCVLDKKPRSF 139
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQK 459
D +L ++A V + +L E Q+
Sbjct: 140 DQAERELLNDLASWVESGFRERELSETQR 168
[164][TOP]
>UniRef100_Q6F7V1 Sensor protein n=1 Tax=Acinetobacter sp. ADP1 RepID=Q6F7V1_ACIAD
Length = 419
Score = 125 bits (315), Expect = 1e-27
Identities = 63/157 (40%), Positives = 96/157 (61%), Gaps = 1/157 (0%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT E+ DD+ L + P++++SL+D+ R WFKS G+P + DRK S C+ +
Sbjct: 22 ILDTMAEQCLDDLVELASKICDAPVSIISLIDETRSWFKSSHGVPRGEVDRKYSICSHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + E+ VVE+ L D RF +NP+V G +RFYAG PL ++G LG+LC++D+KPR
Sbjct: 82 LQK--EIFVVEDTLLDERFHDNPIVQGELAVRFYAGAPLTTSDGFNLGTLCLVDSKPRTL 139
Query: 373 DAESCNMLANMAEMVVREIEKDKL-IEAQKIKSEMLY 480
+ L+ +A VV++ E K +E QK E+ Y
Sbjct: 140 SEDQYKALSVLAVQVVQQFELRKSNLEIQKKNQELQY 176
[165][TOP]
>UniRef100_A5GSN2 GAF domain protein n=1 Tax=Synechococcus sp. RCC307
RepID=A5GSN2_SYNR3
Length = 238
Score = 125 bits (315), Expect = 1e-27
Identities = 65/140 (46%), Positives = 87/140 (62%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
VL T PE+ +DDITR+ + PIAL+SLV ++QWFKS GL R+T R SFCA +
Sbjct: 25 VLGTRPEQCYDDITRIASITCGTPIALMSLVSDEKQWFKSTVGLEARETPRDWSFCAHAI 84
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
P +++E+AL D RFR+NPLV G P+IR YAG PL RLG+LC+ID KP
Sbjct: 85 ADSEP--MIIEDALNDTRFRHNPLVSGDPNIRLYAGFPLETPAEHRLGTLCVIDRKPGAL 142
Query: 373 DAESCNMLANMAEMVVREIE 432
++ ++A VV +E
Sbjct: 143 SDAQLIVMKSLARQVVTLLE 162
[166][TOP]
>UniRef100_A8TQ70 Putative diguanylate cyclase (GGDEF domain) with GAF sensor domain
n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQ70_9PROT
Length = 273
Score = 125 bits (315), Expect = 1e-27
Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 1/170 (0%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LD+ PE FD++ L +F+ PI L+SLVDKDRQWFK+ GL +T R SFC
Sbjct: 20 LSLLDSAPETDFDNLVELGRSLFRVPICLISLVDKDRQWFKARAGLDATETPRDISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L EH +VLVV +A +D RF +NPLV+G P IRFYAG P+ NG +G++CII + R
Sbjct: 80 AIL-EH-DVLVVLDATKDERFHDNPLVVGGPEIRFYAGAPISLPNGYNIGTVCIISPEVR 137
Query: 367 Q-FDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQLIRALD 513
+ F + LA +A + V I + A + + + E +L RAL+
Sbjct: 138 ETFTKDEARQLAGLAGVAVSAIS----VRALRREMDRERSEKERLQRALE 183
[167][TOP]
>UniRef100_A2UZW3 Diguanylate cyclase with GAF sensor n=1 Tax=Shewanella putrefaciens
200 RepID=A2UZW3_SHEPU
Length = 323
Score = 125 bits (315), Expect = 1e-27
Identities = 62/141 (43%), Positives = 88/141 (62%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L VLDT+ E+RFD ITRL +F PI +++LVD RQWFKS QGL + +T R S CA
Sbjct: 20 LNVLDTDAEERFDRITRLTRRIFSLPICVITLVDAQRQWFKSRQGLEITETSRDISLCAH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ + + ++ + L D RF +NP V+ P IRFYAG PL + R+G+LC+ D +PR
Sbjct: 80 AI--NYEGIFIINDTLLDPRFCDNPFVVQEPFIRFYAGYPLTINHHYRVGTLCVNDTEPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
+F E L ++ +MV E+
Sbjct: 138 EFSQEDIETLTDLGQMVEAEL 158
[168][TOP]
>UniRef100_UPI000187403F sensor histidine kinase n=1 Tax=Pseudomonas syringae pv. tomato T1
RepID=UPI000187403F
Length = 438
Score = 125 bits (314), Expect = 2e-27
Identities = 71/160 (44%), Positives = 97/160 (60%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LD+ PE+ FDDI L + PIALVSLVD++RQWFK+ GL VR+T R +FCA
Sbjct: 22 LKILDSAPEQDFDDIVLLATTLCDAPIALVSLVDRERQWFKACIGLDVRETHRDLAFCAH 81
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L E +VLVVE+A D RF+ +PLVLG P+IRFYAG P+ G LG++C+ID PR
Sbjct: 82 AIL-EPSDVLVVEDATTDPRFKESPLVLGPPYIRFYAGAPIRTDAGHALGTVCVIDIWPR 140
Query: 367 QFDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRE 486
+ L +A ++ L E + ++ L E
Sbjct: 141 VLTEQQRLALLALARQTAALMQYRLLTEQRDQQAAQLALE 180
[169][TOP]
>UniRef100_Q880G5 Sensor protein n=1 Tax=Pseudomonas syringae pv. tomato
RepID=Q880G5_PSESM
Length = 438
Score = 125 bits (314), Expect = 2e-27
Identities = 71/160 (44%), Positives = 97/160 (60%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LD+ PE+ FDDI L + PIALVSLVD++RQWFK+ GL VR+T R +FCA
Sbjct: 22 LKILDSAPEQDFDDIVLLATTLCDAPIALVSLVDRERQWFKACIGLDVRETHRDLAFCAH 81
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L E +VLVVE+A D RF+ +PLVLG P+IRFYAG P+ G LG++C+ID PR
Sbjct: 82 AIL-EPSDVLVVEDATTDPRFKESPLVLGPPYIRFYAGAPIRTDAGHALGTVCVIDIWPR 140
Query: 367 QFDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRE 486
+ L +A ++ L E + ++ L E
Sbjct: 141 VLTEQQRLALLALARQTAALMQYRLLTEQRDQQAAQLALE 180
[170][TOP]
>UniRef100_Q055K2 Sensor protein n=1 Tax=Leptospira borgpetersenii serovar
Hardjo-bovis L550 RepID=Q055K2_LEPBL
Length = 564
Score = 125 bits (314), Expect = 2e-27
Identities = 60/164 (36%), Positives = 100/164 (60%), Gaps = 3/164 (1%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+++T PE++FD +T++ + PI L+SL+D +R WFKS G+ V R SFC +T+
Sbjct: 27 IINTTPEEKFDSLTQIAAYICDSPIVLISLIDTNRLWFKSKIGMNVSGIPRDISFCQYTI 86
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
+ + E+ +ENAL D +F+NNP VLG P+IRFYAG PL G +G+LC+ D +P++
Sbjct: 87 IQD--EIFEIENALNDEKFQNNPFVLGPPYIRFYAGTPLKTPEGFNVGTLCVFDTEPKRL 144
Query: 373 DAESCNMLANMAEMVVRE---IEKDKLIEAQKIKSEMLYRENNQ 495
D+ L ++ ++ I+K++ + + K E L + +Q
Sbjct: 145 DSRQKMTLKVLSNQIIANFELIKKNRELVSVHEKKEELQKSKSQ 188
[171][TOP]
>UniRef100_UPI0001AF604F GAF:ATP-binding region, ATPase-like:histidine kinase A, N-terminal
n=1 Tax=Pseudomonas syringae pv. oryzae str. 1_6
RepID=UPI0001AF604F
Length = 219
Score = 125 bits (313), Expect = 2e-27
Identities = 68/151 (45%), Positives = 97/151 (64%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L VLD+ PE+ FDDI L + PIALVSL+D++RQWFK+ GL VR+T R +FCA
Sbjct: 22 LNVLDSLPERDFDDIVLLATTLCDAPIALVSLIDRERQWFKACIGLDVRETHRDLAFCAH 81
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L + +V+VVE+A D RFR +PLVLG P+I+FYAG P+ +G LG++C+ID PR
Sbjct: 82 AIL-QPDDVMVVEDATTDPRFRESPLVLGPPYIKFYAGAPIRTEDGHALGTVCVIDIWPR 140
Query: 367 QFDAESCNMLANMAEMVVREIEKDKLIEAQK 459
+ L +A +E ++L+ Q+
Sbjct: 141 VLTEQQRLALQALARQTGALLE-NRLLNEQR 170
[172][TOP]
>UniRef100_Q48JN0 Sensor protein n=1 Tax=Pseudomonas syringae pv. phaseolicola 1448A
RepID=Q48JN0_PSE14
Length = 434
Score = 125 bits (313), Expect = 2e-27
Identities = 65/120 (54%), Positives = 84/120 (70%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LD+ PE+ FDDI L + PIALVSLVD++RQWFK+ GL V++T R +FCA
Sbjct: 22 LRILDSAPEQDFDDIVLLATTLCDAPIALVSLVDRERQWFKACIGLDVKETHRDLAFCAH 81
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L + +VLVVE+A D RFR +PLVLG P+IRFYAG P+ G LG++CIID PR
Sbjct: 82 AIL-QPSDVLVVEDATTDPRFRESPLVLGPPYIRFYAGAPIRTDTGHALGTVCIIDIWPR 140
[173][TOP]
>UniRef100_B8HS57 Sensor protein n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HS57_CYAP4
Length = 1965
Score = 125 bits (313), Expect = 2e-27
Identities = 66/141 (46%), Positives = 90/141 (63%), Gaps = 1/141 (0%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE+ FD IT L +F PI LVSLVD+ R WFKS G ++ R ++ C++TL
Sbjct: 31 ILDTPPEQAFDRITALAARLFGVPIVLVSLVDETRAWFKSCYGFNQQEVARDATICSFTL 90
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR-Q 369
L H +V VV +A +D RF NPLV P +RFYAG PL+ +G LG+LC++D +PR
Sbjct: 91 L--HDDVFVVPDARQDDRFACNPLVKAEPGLRFYAGAPLLTADGFNLGTLCLLDTQPRDS 148
Query: 370 FDAESCNMLANMAEMVVREIE 432
AE L ++A MV+ E+E
Sbjct: 149 LTAEQRATLTDLAAMVMDELE 169
[174][TOP]
>UniRef100_B1ZF40 Signal transduction histidine kinase n=1 Tax=Methylobacterium
populi BJ001 RepID=B1ZF40_METPB
Length = 929
Score = 125 bits (313), Expect = 2e-27
Identities = 69/152 (45%), Positives = 90/152 (59%), Gaps = 2/152 (1%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LDT PE+ FDDI +L P+ALVSLV +RQWFK+ G P QTD +S C
Sbjct: 24 GILDTPPEQGFDDIVQLARDACDAPVALVSLVAGNRQWFKARSGFPACQTDLDASVCVHA 83
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
L P++LV+ + D R R NPLV G+PH+RFYAG PL +G LGSLC+ID+KPR
Sbjct: 84 L--REPDLLVIPDLTRDPRTRANPLVTGAPHLRFYAGAPLRTPSGQVLGSLCVIDHKPRP 141
Query: 370 --FDAESCNMLANMAEMVVREIEKDKLIEAQK 459
L +A V+ ++E + AQK
Sbjct: 142 EGLSGREARSLRALAGQVMTQLELRRSHAAQK 173
[175][TOP]
>UniRef100_A1RGB4 Diguanylate cyclase with GAF sensor n=2 Tax=Shewanella
RepID=A1RGB4_SHESW
Length = 323
Score = 125 bits (313), Expect = 2e-27
Identities = 62/141 (43%), Positives = 87/141 (61%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L VLDT+ E+RFD ITRL +F PI +++LVD RQWFKS QGL + +T R S CA
Sbjct: 20 LNVLDTDAEERFDRITRLTRRIFSLPICVITLVDAQRQWFKSRQGLEITETSRDISLCAH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+ + + ++ + L D RF +NP V P IRFYAG PL + R+G+LC+ D +PR
Sbjct: 80 AI--NYEGIFIINDTLLDPRFCDNPFVAQEPFIRFYAGYPLTINHHYRVGTLCVNDTEPR 137
Query: 367 QFDAESCNMLANMAEMVVREI 429
+F E L ++ +MV E+
Sbjct: 138 EFSQEDIETLTDLGQMVEAEL 158
[176][TOP]
>UniRef100_Q48GS4 Sensory box/GGDEF family protein n=1 Tax=Pseudomonas syringae pv.
phaseolicola 1448A RepID=Q48GS4_PSE14
Length = 732
Score = 124 bits (312), Expect = 3e-27
Identities = 65/145 (44%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
++DT PE +D I ++ +F PI L+SLV +DRQ+FK+ GL V +T R SFC + L
Sbjct: 22 LMDTPPEHEYDQIVQMASRIFDVPIVLISLVHRDRQFFKARIGLDVCETGRDVSFCNFAL 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ- 369
+ + V +V +AL+D RF +N LV+G+P+IRFYAG PL+ +G LGSLC+IDNKPR+
Sbjct: 82 MGRN--VFLVPDALQDERFSSNALVVGAPYIRFYAGAPLITASGHVLGSLCLIDNKPRET 139
Query: 370 FDAESCNMLANMAEMVVREIEKDKL 444
F +L ++A +V+ +E +L
Sbjct: 140 FSQRDQLVLQDLAVIVIERMELRRL 164
[177][TOP]
>UniRef100_B2IZV9 Putative GAF and Chase3 sensor phosphotransfer protein n=1
Tax=Nostoc punctiforme PCC 73102 RepID=B2IZV9_NOSP7
Length = 558
Score = 124 bits (312), Expect = 3e-27
Identities = 62/140 (44%), Positives = 86/140 (61%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT E FDD+TRL + + PIAL+SL+D +RQWFKS GL +T R +FC+ +
Sbjct: 21 ILDTPSEAAFDDLTRLASYICQTPIALISLIDTNRQWFKSRVGLDTLETHRDLAFCSHAI 80
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L P+V VV +A +D RF N LV P+IRFYAG PL G LG+LC+ID PR+
Sbjct: 81 L--QPDVFVVPDATDDERFATNLLVTSDPNIRFYAGVPLTNPEGYALGTLCVIDYIPREL 138
Query: 373 DAESCNMLANMAEMVVREIE 432
+ L + V++++E
Sbjct: 139 TPDQIEALRTLGRQVIKQLE 158
[178][TOP]
>UniRef100_C9YAH7 Putative uncharacterized protein n=1 Tax=Curvibacter putative
symbiont of Hydra magnipapillata RepID=C9YAH7_9BURK
Length = 359
Score = 124 bits (312), Expect = 3e-27
Identities = 67/168 (39%), Positives = 100/168 (59%), Gaps = 7/168 (4%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT E+ +DD+ L + PIAL+SLVD+DRQWFK+ GL +T R +FCA +
Sbjct: 21 ILDTPAEQAYDDVVSLASFICDTPIALISLVDEDRQWFKARLGLSAMETPRGQAFCAHAI 80
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
+ + V+ V +AL+D RF +NPLV G P IRFYAG PL+ +G LG++C+ID PR+
Sbjct: 81 V-DPDRVMEVPDALQDARFVDNPLVTGDPGIRFYAGAPLLTPSGAALGTVCVIDKVPRKL 139
Query: 373 DAESCNMLANMAEMVVR-------EIEKDKLIEAQKIKSEMLYRENNQ 495
L ++ VV+ E + + +AQ ++ + L EN+Q
Sbjct: 140 TERQSEALQALSRQVVQLLALRRANAELELVAKAQTLRQQQL--ENHQ 185
[179][TOP]
>UniRef100_Q4UY13 Sensor protein n=2 Tax=Xanthomonas campestris pv. campestris
RepID=Q4UY13_XANC8
Length = 442
Score = 124 bits (311), Expect = 4e-27
Identities = 66/160 (41%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LDT E F+DIT+L ++ + PIAL+SLVD DRQWFKS +G+ R+T S CA
Sbjct: 77 GILDTPREAAFEDITKLASIICQTPIALISLVDADRQWFKSERGMGERETPLFKSMCAHA 136
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
LL +VLVV + ED RF NPLV G + FYAG L +GL LG++C++D +PRQ
Sbjct: 137 LLDN--DVLVVPDTREDARFSRNPLVTGESPLYFYAGALLKTPDGLPLGTVCVLDRQPRQ 194
Query: 370 FDAESCNMLANMAEMVVREIEKDKLI----EAQKIKSEML 477
E + L +A + ++E + + E+ + +S ++
Sbjct: 195 LTDEQVDALRALARQTMAQLELRRALLIAEESNRYRSRLM 234
[180][TOP]
>UniRef100_Q13EY1 HWE histidine kinase n=1 Tax=Rhodopseudomonas palustris BisB5
RepID=Q13EY1_RHOPS
Length = 538
Score = 124 bits (311), Expect = 4e-27
Identities = 72/161 (44%), Positives = 91/161 (56%), Gaps = 9/161 (5%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+ G+LDT PE+ FDD+ L L+ + P+ALVS V DRQWFK+ G QTD SS CA
Sbjct: 18 RFGILDTPPERGFDDVVELTTLICETPVALVSFVTDDRQWFKARVGFDACQTDLNSSVCA 77
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNK- 360
L+ P++LVV + D R + NPLV G P IRFYAG PL G LGSLC ID K
Sbjct: 78 HALI--EPDLLVVPDLTIDERTKYNPLVTGQPFIRFYAGAPLRTAGGHVLGSLCAIDTKA 135
Query: 361 -PRQFDAESCNMLANMAEMVVREIE-------KDKLIEAQK 459
P A + L N+ VV ++E +D L+ QK
Sbjct: 136 RPGGLTAAQTSALRNLGRQVVAQLELRHAVAQRDALLTEQK 176
[181][TOP]
>UniRef100_Q0C5I2 GAF domain protein n=1 Tax=Hyphomonas neptunium ATCC 15444
RepID=Q0C5I2_HYPNA
Length = 187
Score = 124 bits (311), Expect = 4e-27
Identities = 70/144 (48%), Positives = 87/144 (60%), Gaps = 3/144 (2%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
LG+LDT P+ R D ITR FK P+ALV+L+D D QW KS GL Q R +FC
Sbjct: 26 LGILDTPPDARIDAITREAADYFKVPMALVTLIDSDSQWIKSNTGLIDFQGPRAIAFCHH 85
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
T+ + +LVVENAL D RF +NP+V PHIRFYAG PLV RLGS C++D+ PR
Sbjct: 86 TI--QRLRLLVVENALADPRFCDNPMVRNPPHIRFYAGAPLVVGGRYRLGSFCLLDDIPR 143
Query: 367 QFDAESCNML---ANMAEMVVREI 429
D E + L A A ++ EI
Sbjct: 144 TLDTEGRSRLWQFATTASQLIEEI 167
[182][TOP]
>UniRef100_B0RPG1 Sensor protein n=1 Tax=Xanthomonas campestris pv. campestris str.
B100 RepID=B0RPG1_XANCB
Length = 398
Score = 124 bits (311), Expect = 4e-27
Identities = 66/160 (41%), Positives = 97/160 (60%), Gaps = 4/160 (2%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LDT E F+DIT+L ++ + PIAL+SLVD DRQWFKS +G+ R+T S CA
Sbjct: 33 GILDTPREAAFEDITKLASIICQTPIALISLVDADRQWFKSERGMGERETPLFKSMCAHA 92
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
LL +VLVV + ED RF NPLV G + FYAG L +GL LG++C++D +PRQ
Sbjct: 93 LLDN--DVLVVPDTREDARFSRNPLVTGESPLYFYAGALLKTPDGLPLGTVCVLDRQPRQ 150
Query: 370 FDAESCNMLANMAEMVVREIEKDKLI----EAQKIKSEML 477
E + L +A + ++E + + E+ + +S ++
Sbjct: 151 LTDEQVDALRALARQTMAQLELRRALLIAEESNRYRSRLM 190
[183][TOP]
>UniRef100_A3JB69 Sensory box/GGDEF/GAF/EAL domain protein n=1 Tax=Marinobacter sp.
ELB17 RepID=A3JB69_9ALTE
Length = 806
Score = 124 bits (311), Expect = 4e-27
Identities = 67/173 (38%), Positives = 103/173 (59%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L ++DT E+RFD + L + PIAL SL+D+ RQWFKS +GL +++T R +FC
Sbjct: 30 RLAIMDTGSEERFDRLINLARRYYNTPIALFSLLDEKRQWFKSKRGLDLKETPRSIAFCD 89
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+ + V VV +A +D RF NNP+V G HIRFYAG P+ G ++G+LCI+D+KP
Sbjct: 90 HAIRQD--SVFVVADASKDERFCNNPMVTGESHIRFYAGMPVREPGGFKMGTLCIMDHKP 147
Query: 364 RQFDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQLIRALDCFN 522
R ++L +A ++ E+E+ +Q K + R N + RA + F+
Sbjct: 148 RDIPEHELDVLRTLASLIEDEVER-FYHASQYQKQVPVSRLNRAIQRAQNTFH 199
[184][TOP]
>UniRef100_A2TNI3 Sensor protein n=1 Tax=Dokdonia donghaensis MED134
RepID=A2TNI3_9FLAO
Length = 401
Score = 124 bits (311), Expect = 4e-27
Identities = 68/166 (40%), Positives = 103/166 (62%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
LG+LDT E+ FD IT+L + P+ALV+LVD+DRQWFKS G+ + +T R SSFCA
Sbjct: 20 LGLLDTNQEEDFDYITKLAAYICGTPVALVTLVDEDRQWFKSKVGMALCETSRDSSFCAH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L E+L + +A +D RF +NPL + FYAG PL T+G+ +GSLC+ID+KP
Sbjct: 80 AILTP-DEILEIPDATKDDRFIDNPLTKLEDPVIFYAGVPLRTTDGMSMGSLCVIDHKPN 138
Query: 367 QFDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQLIR 504
+ E L +A+ V R E +++ Q +++ ++N L++
Sbjct: 139 KLSKEQRAALITLAKQVERLFEL-RIVNNQLEQAKASLTKHNTLLK 183
[185][TOP]
>UniRef100_Q4ZRX8 Sensor protein n=1 Tax=Pseudomonas syringae pv. syringae B728a
RepID=Q4ZRX8_PSEU2
Length = 442
Score = 124 bits (310), Expect = 5e-27
Identities = 66/134 (49%), Positives = 88/134 (65%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LD+ PE+ FDDI L + PIALVSLVD++RQWFK+ GL V++T R +FCA
Sbjct: 22 LKILDSAPEQDFDDIVLLATTLCDAPIALVSLVDRERQWFKACIGLDVQETHRDLAFCAH 81
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L + +VLVVE+A D RFR +PLVLG P+IRFYAG P+ G LG++C+ID PR
Sbjct: 82 AIL-QPSDVLVVEDATTDPRFRESPLVLGPPYIRFYAGAPIRTEAGHALGTVCVIDIWPR 140
Query: 367 QFDAESCNMLANMA 408
+ L +A
Sbjct: 141 VLSDQQRRALLALA 154
[186][TOP]
>UniRef100_Q1VT14 Sensor protein n=1 Tax=Psychroflexus torquis ATCC 700755
RepID=Q1VT14_9FLAO
Length = 399
Score = 124 bits (310), Expect = 5e-27
Identities = 70/166 (42%), Positives = 103/166 (62%), Gaps = 1/166 (0%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
K +LDT PE+ FD IT + + K PI+LVS++DKDRQWFKS GL +T R SFC+
Sbjct: 19 KYNILDTLPEEDFDAITNIAASICKTPISLVSIIDKDRQWFKSHHGLNSTETPRDISFCS 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
++L + E+ +V +A +D RF +NPL P++ FYAG PL +++G LG+LC+ID
Sbjct: 79 HSILTPN-ELFIVNDATKDERFYDNPLTTNYPNVIFYAGAPLNSSDGHCLGTLCVIDKTA 137
Query: 364 RQFDAESCNMLANMAEMVVREIE-KDKLIEAQKIKSEMLYRENNQL 498
R+ + + L +A+ VV +E + K E + E+L R N QL
Sbjct: 138 RKLNKDQKENLKLLAKQVVNLLELRRKNAELSQANEEVL-RLNKQL 182
[187][TOP]
>UniRef100_UPI0000383240 COG2202: FOG: PAS/PAC domain n=1 Tax=Magnetospirillum
magnetotacticum MS-1 RepID=UPI0000383240
Length = 397
Score = 123 bits (309), Expect = 7e-27
Identities = 65/154 (42%), Positives = 92/154 (59%), Gaps = 2/154 (1%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L +LDT+PE FD + R C +F A VSLVD +RQW K+ G Q R+ SFC+
Sbjct: 17 ELRILDTDPEAPFDAVCRTACRLFGVAAAYVSLVDAERQWLKACAGTMPAQMPREGSFCS 76
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
T+ E VLV+ +A D RFR+ +V G PH+ FYAG PL+ GLRLG+LC++D +P
Sbjct: 77 RTI--EQDAVLVIPDARRDPRFRDLGIVTGPPHVAFYAGAPLILRPGLRLGALCLVDPQP 134
Query: 364 RQFDAESCNMLANMAEMVVRE--IEKDKLIEAQK 459
R F L ++AE+V + + +D L A +
Sbjct: 135 RTFTPADAEALRDLAEIVTAQLHLRRDNLAYASE 168
[188][TOP]
>UniRef100_A8GEI1 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Serratia
proteamaculans 568 RepID=A8GEI1_SERP5
Length = 624
Score = 123 bits (309), Expect = 7e-27
Identities = 71/166 (42%), Positives = 99/166 (59%), Gaps = 6/166 (3%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L VLDT ++ D +TRL F IAL+SL+D++RQWF S GL R++ R SFC
Sbjct: 20 LNVLDTNSVEKLDRVTRLAAKYFGVSIALISLIDRERQWFLSRSGLEARESPRNISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L + LVV + D RF +NPLV G P I FYAG PL++ +GL LG+LCIID P+
Sbjct: 80 AILQR--DALVVPDTAADPRFFDNPLVTGGPKIGFYAGQPLLSLDGLPLGTLCIIDGHPQ 137
Query: 367 QFDAESCNMLANMAEMV---VREIEKDKLIEAQKI---KSEMLYRE 486
F +E + L + A ++ + IE+D EA K +SE L+ +
Sbjct: 138 AFSSEMVHDLRDFAAVIEEYLHSIERDIYTEALKSNLQRSEALFEQ 183
[189][TOP]
>UniRef100_A3PPJ2 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides
ATCC 17029 RepID=A3PPJ2_RHOS1
Length = 325
Score = 123 bits (309), Expect = 7e-27
Identities = 65/160 (40%), Positives = 92/160 (57%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+ VLDT PE+ FD +TRL C V + P A V+L+D DRQWFKS+ GL + R SFC
Sbjct: 19 RYAVLDTAPEEPFDKLTRLVCNVLEVPYAAVTLIDADRQWFKSLVGLSGSEGPRHESFCT 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
T+ P +VV +A D RFR++PLV G+ IR Y G PL +G LG+LC +D P
Sbjct: 79 HTIKTRDP--MVVPDATLDPRFRDSPLVTGAAGIRSYLGVPLETPDGYNLGALCAVDTAP 136
Query: 364 RQFDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYR 483
R F ++ + A +V+ E+E ++ + + M R
Sbjct: 137 RTFSTSQIEIMKSFASLVLDELELRQIALSDALTGAMTRR 176
[190][TOP]
>UniRef100_C9XUW9 Putative uncharacterized protein n=1 Tax=Cronobacter turicensis
RepID=C9XUW9_9ENTR
Length = 327
Score = 123 bits (309), Expect = 7e-27
Identities = 63/140 (45%), Positives = 89/140 (63%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
+ +LDT ++RF+ +TR+ +F+ P+AL+SL+D+DRQW + QGL R+T R SFC
Sbjct: 28 MDLLDTRDDERFERLTRVAKKLFQVPVALISLLDRDRQWLLACQGLNTRETTRDVSFCGH 87
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L E P +V +A D RF +NPLV G P IRFYAG P+ +G +G+LCIID PR
Sbjct: 88 AILQEGP--FIVNDARLDARFHDNPLVTGEPFIRFYAGYPVRLPDGAVVGTLCIIDGTPR 145
Query: 367 QFDAESCNMLANMAEMVVRE 426
F E L ++A +V E
Sbjct: 146 DFSDEDIATLKDLAFIVEDE 165
[191][TOP]
>UniRef100_A1ZZA0 Multi-sensor Hybrid Histidine Kinase n=1 Tax=Microscilla marina
ATCC 23134 RepID=A1ZZA0_9SPHI
Length = 455
Score = 123 bits (309), Expect = 7e-27
Identities = 59/169 (34%), Positives = 100/169 (59%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+ +LDT E+ FDD+ +L + + P++L+SLV +D+QWFK+ GL R+ R+ SFCA
Sbjct: 19 RYNILDTGFEQEFDDLVKLASHICETPVSLMSLVAEDKQWFKAKVGLEPREAPRELSFCA 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+ P++ VV++A +D RF +NP V P +RFYAG PL +G LG+LC+ID +P
Sbjct: 79 HAI--HTPDLFVVKDATKDERFHDNPFVADHPKVRFYAGMPLTTPDGFNLGTLCVIDQRP 136
Query: 364 RQFDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQLIRAL 510
R D L +A V+ ++E ++ + ++ +N ++ ++
Sbjct: 137 RDLDEAQKKALKTLAAQVIAQLELRLKLKTIGQEKRVIAEKNRAIVESI 185
[192][TOP]
>UniRef100_UPI0001693802 putative sensor protein n=1 Tax=Xanthomonas oryzae pv. oryzicola
BLS256 RepID=UPI0001693802
Length = 365
Score = 123 bits (308), Expect = 9e-27
Identities = 67/155 (43%), Positives = 95/155 (61%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE +D T L +F+ P+AL+SLVD RQWFKS G+ +T R SFCA +
Sbjct: 49 LLDTAPEPSYDAFTSLAATLFRTPMALISLVDTHRQWFKSRIGMQATETPRTLSFCAHAI 108
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L E +V+ V++ D RF N LV G P IRFYAG PL+ ++G+ LG+LC++D PR+
Sbjct: 109 L-EPDQVMEVDDTHLDRRFVINALVTGEPQIRFYAGAPLLTSDGIALGTLCVLDRTPRRL 167
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEML 477
A + L +A+ VV IE + AQ ++ + L
Sbjct: 168 SAAERDALQALAKQVVNTIELQQ--AAQLVQQDAL 200
[193][TOP]
>UniRef100_Q46JA3 GAF n=1 Tax=Prochlorococcus marinus str. NATL2A RepID=Q46JA3_PROMT
Length = 253
Score = 123 bits (308), Expect = 9e-27
Identities = 63/143 (44%), Positives = 88/143 (61%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+L T+PE+ +DDIT++ L PI+L+SLVD D QWFKS+ G ++T R SFCA +
Sbjct: 23 ILGTQPEQCYDDITKIASLTCGTPISLMSLVDTDTQWFKSMCGFETKETSRDVSFCAHAI 82
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
P L+VE+AL D RF++NPLV+ P IR YAG PL N R+G+LC+ID KP
Sbjct: 83 ASSEP--LIVEDALLDERFKSNPLVVEEPKIRLYAGFPLQTPNDQRIGTLCVIDRKPGHL 140
Query: 373 DAESCNMLANMAEMVVREIEKDK 441
++ ++ VV +E K
Sbjct: 141 SDHQHQIMEALSRQVVTLLELRK 163
[194][TOP]
>UniRef100_Q3IWG8 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides
2.4.1 RepID=Q3IWG8_RHOS4
Length = 326
Score = 123 bits (308), Expect = 9e-27
Identities = 64/160 (40%), Positives = 92/160 (57%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+ VLDT PE+ FD +TRL C V + P A V+L+D DRQWFKS+ GL + R SFC
Sbjct: 20 RYAVLDTAPEEPFDKLTRLVCNVLEVPYAAVTLIDADRQWFKSLVGLSGSEGPRHESFCT 79
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
T+ P ++V +A D RFR++PLV G+ IR Y G PL +G LG+LC +D P
Sbjct: 80 HTIKTRDP--MIVPDATLDPRFRDSPLVTGAAGIRSYLGVPLETPDGYNLGALCAVDTAP 137
Query: 364 RQFDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYR 483
R F ++ + A +V+ E+E ++ + + M R
Sbjct: 138 RTFSTSQIEIMKSFASLVLDELELRQIALSDALTGAMTRR 177
[195][TOP]
>UniRef100_B9KU13 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides
KD131 RepID=B9KU13_RHOSK
Length = 326
Score = 123 bits (308), Expect = 9e-27
Identities = 64/160 (40%), Positives = 92/160 (57%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+ VLDT PE+ FD +TRL C V + P A V+L+D DRQWFKS+ GL + R SFC
Sbjct: 20 RYAVLDTAPEEPFDKLTRLVCNVLEVPYAAVTLIDADRQWFKSLVGLSGSEGPRHESFCT 79
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
T+ P ++V +A D RFR++PLV G+ IR Y G PL +G LG+LC +D P
Sbjct: 80 HTIKTRDP--MIVPDATLDPRFRDSPLVTGAAGIRSYLGVPLETPDGYNLGALCAVDTAP 137
Query: 364 RQFDAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYR 483
R F ++ + A +V+ E+E ++ + + M R
Sbjct: 138 RTFSTSQIEIMKSFASLVLDELELRQIALSDALTGAMTRR 177
[196][TOP]
>UniRef100_B8IM22 Putative phytochrome sensor protein n=1 Tax=Methylobacterium
nodulans ORS 2060 RepID=B8IM22_METNO
Length = 607
Score = 123 bits (308), Expect = 9e-27
Identities = 65/146 (44%), Positives = 87/146 (59%), Gaps = 4/146 (2%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L +LDT PE+RFD I L F P A +SLVD DRQWFK+ GL R+ R +S CA
Sbjct: 452 RLDLLDTPPEERFDRIVALAARSFAVPFAALSLVDSDRQWFKASHGLTFREVPRDASLCA 511
Query: 184 WTLLPEHP----EVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCII 351
+ + LVV + L D RF ++P V+G PH+RFYAG PL+ +G +G+LCI
Sbjct: 512 HAVAASDGGGCRDPLVVPDTLLDARFADSPAVVGPPHLRFYAGQPLILADGHCIGTLCIA 571
Query: 352 DNKPRQFDAESCNMLANMAEMVVREI 429
D +PR D E L +AE+ + EI
Sbjct: 572 DTRPRVLDPEEERRLRWLAELALNEI 597
[197][TOP]
>UniRef100_A4WAT5 Diguanylate cyclase with GAF sensor n=1 Tax=Enterobacter sp. 638
RepID=A4WAT5_ENT38
Length = 318
Score = 123 bits (308), Expect = 9e-27
Identities = 60/140 (42%), Positives = 92/140 (65%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT ++RFD +TR+ +F+ P+ L+SL+D+DRQW + +GL R+T R SFC +
Sbjct: 22 LLDTGADERFDRLTRIAKKIFQVPVVLISLLDRDRQWLLACEGLGTRETPRNISFCGHVI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L E P +V +A+ D RF +NPLV+G P+IRFYAG P+ +G G+LC+I+ KPR F
Sbjct: 82 LQEGP--FIVNDAVNDERFHDNPLVIGEPYIRFYAGYPVHLPDGGVAGALCLINTKPRGF 139
Query: 373 DAESCNMLANMAEMVVREIE 432
+ + L ++A +V E +
Sbjct: 140 NDDDIASLRDLAFIVEDEFK 159
[198][TOP]
>UniRef100_A2C4D7 FOG: GAF domain-containing protein n=1 Tax=Prochlorococcus marinus
str. NATL1A RepID=A2C4D7_PROM1
Length = 253
Score = 123 bits (308), Expect = 9e-27
Identities = 63/143 (44%), Positives = 88/143 (61%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+L T+PE+ +DDIT++ L PI+L+SLVD D QWFKS+ G ++T R SFCA +
Sbjct: 23 ILGTQPEQCYDDITKIASLTCGTPISLMSLVDTDTQWFKSMCGFETKETSRDVSFCAHAI 82
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
P L+VE+AL D RF++NPLV+ P IR YAG PL N R+G+LC+ID KP
Sbjct: 83 ASSEP--LIVEDALLDERFKSNPLVVEEPKIRLYAGFPLQTPNDQRIGTLCVIDRKPGHL 140
Query: 373 DAESCNMLANMAEMVVREIEKDK 441
++ ++ VV +E K
Sbjct: 141 SDHQHQIMEALSRQVVTLLELRK 163
[199][TOP]
>UniRef100_A4ADK1 Putative uncharacterized protein n=1 Tax=Congregibacter litoralis
KT71 RepID=A4ADK1_9GAMM
Length = 164
Score = 123 bits (308), Expect = 9e-27
Identities = 65/135 (48%), Positives = 87/135 (64%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT P++RFDDIT F LVSLVD++RQWF S QGL +T+R SFC +
Sbjct: 22 LLDTAPDRRFDDITDRAQRSFAVQTVLVSLVDENRQWFLSRQGLEATETERCISFCGHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + E+L+V + D RFR+NPLV G P IRFYAG P+ G R+G+LC+ID KPR
Sbjct: 82 LSD--EMLLVPDTHRDPRFRDNPLVTGDPFIRFYAGQPVREPTGFRVGTLCLIDPKPRTL 139
Query: 373 DAESCNMLANMAEMV 417
++ +LA++A V
Sbjct: 140 SSQEQELLASLAAEV 154
[200][TOP]
>UniRef100_Q05RZ0 GAF n=1 Tax=Synechococcus sp. RS9916 RepID=Q05RZ0_9SYNE
Length = 251
Score = 122 bits (307), Expect = 1e-26
Identities = 64/143 (44%), Positives = 89/143 (62%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+L T+PE+ +DDIT + LV PIAL+SLVD +RQWFKS G+ V +T R SFCA +
Sbjct: 22 ILGTKPERSYDDITAIASLVCGTPIALLSLVDAERQWFKSKVGVNVDETPRDWSFCAHAI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
P+ L+V +AL D RF +NPLV G P IRFYAG PL R+G+LC+ID +P+
Sbjct: 82 --HTPDPLIVHDALWDERFHDNPLVCGDPKIRFYAGFPLTNDTQERIGTLCVIDRQPKHL 139
Query: 373 DAESCNMLANMAEMVVREIEKDK 441
++ +A V+ ++ K
Sbjct: 140 SDNQLAIMTALARQVMTFLDLRK 162
[201][TOP]
>UniRef100_O52937 Sensor protein n=1 Tax=Calothrix viguieri RepID=O52937_9CYAN
Length = 744
Score = 122 bits (307), Expect = 1e-26
Identities = 64/144 (44%), Positives = 90/144 (62%), Gaps = 1/144 (0%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+ +LDT PE FD IT L +F PI LVSLVD+ R WFKS G +R+ R ++ C+
Sbjct: 28 RYNILDTPPEVAFDRITSLAARLFNVPITLVSLVDESRGWFKSSYGFEMREVRRDTTICS 87
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+ LL + EVLV+ + ED R NP V P +RFYAG PL+ +G LG+LC++D KP
Sbjct: 88 FALLSD--EVLVIPDTREDSRLVCNPFVQNEPGLRFYAGAPLLTQDGFNLGTLCLLDTKP 145
Query: 364 RQ-FDAESCNMLANMAEMVVREIE 432
R E ++L+++A MV+ E+E
Sbjct: 146 RDGLSDEQKSVLSDLAAMVMDELE 169
[202][TOP]
>UniRef100_B4WC53 PAS fold family n=1 Tax=Brevundimonas sp. BAL3 RepID=B4WC53_9CAUL
Length = 658
Score = 122 bits (307), Expect = 1e-26
Identities = 69/156 (44%), Positives = 98/156 (62%), Gaps = 2/156 (1%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
GVLDT+ E FDDI L + + PIA+V+L+D DRQWFK+ GL VR+T +SFCA T
Sbjct: 37 GVLDTDREAAFDDIVALIARICEAPIAVVNLIDADRQWFKAEAGLGVRETPLATSFCAHT 96
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
LL + +VV +A D RF NPLV G PH+RFYAG L +G+ LG+LC++D K R
Sbjct: 97 LL--QADGMVVRDASLDPRFAANPLVTGEPHLRFYAGRLLKTQDGVPLGALCVLDTKARP 154
Query: 370 FDAESCNMLA--NMAEMVVREIEKDKLIEAQKIKSE 471
+A +A+ V+ ++E +++ Q+ +SE
Sbjct: 155 EGLTDLQQMALQTLADQVMSQLELRRVLR-QREESE 189
[203][TOP]
>UniRef100_Q11SP3 Sensor protein n=1 Tax=Cytophaga hutchinsonii ATCC 33406
RepID=Q11SP3_CYTH3
Length = 400
Score = 122 bits (306), Expect = 1e-26
Identities = 64/153 (41%), Positives = 97/153 (63%), Gaps = 4/153 (2%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PEK F+DIT++ + + PI++++L+D +RQWFKS G+ +T R +FCA L
Sbjct: 22 ILDTLPEKDFEDITKIASEICQTPISMITLIDAERQWFKSKIGINDTETHRDYAFCAHAL 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
+ ++L V ++ ED RF +NP V G P++ FYAG PLV +G LG++C+IDN PR+
Sbjct: 82 -NKPDDILNVTDSREDNRFSDNPYVTGDPNVVFYAGVPLVNEDGYALGTICVIDNTPREL 140
Query: 373 DAESCNMLANMAEMVVREIEKDK----LIEAQK 459
+ N L ++ VV+ E K LIE Q+
Sbjct: 141 NEMQLNSLRALSNQVVKLFELRKANRLLIETQQ 173
[204][TOP]
>UniRef100_B4RZW0 GGDEF domain-containing PAS signal transduction protein n=1
Tax=Alteromonas macleodii 'Deep ecotype'
RepID=B4RZW0_ALTMD
Length = 794
Score = 122 bits (306), Expect = 1e-26
Identities = 60/144 (41%), Positives = 92/144 (63%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+LG+LDT ++RFD ITRL VF C + ++L+D DRQWFKS L + ++ R+ +FC
Sbjct: 36 RLGLLDTPKDERFDRITRLASSVFNCRYSSITLIDADRQWFKSAVNLELSESGREVAFCN 95
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
T+ + L++ + +D RF NP V+G P++RFYAG LV +G +G+LC+ D++P
Sbjct: 96 HTI--SQDDALIIPDTKKDPRFEQNPFVIGEPYVRFYAGVSLV-VDGQAVGALCVFDSEP 152
Query: 364 RQFDAESCNMLANMAEMVVREIEK 435
R F A+ L ++AEM E+ K
Sbjct: 153 RIFSADEIFQLKSLAEMAQSELCK 176
[205][TOP]
>UniRef100_A4X064 Diguanylate cyclase with GAF sensor n=1 Tax=Rhodobacter sphaeroides
ATCC 17025 RepID=A4X064_RHOS5
Length = 344
Score = 122 bits (306), Expect = 1e-26
Identities = 64/157 (40%), Positives = 91/157 (57%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT P++ FD ITR VF P+ ++ +D RQWFKS G+ R+TDR SSFC T+
Sbjct: 28 ILDTLPDREFDIITRTVQHVFNVPMTAITFIDSYRQWFKSEIGMDRRETDRASSFCNRTI 87
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
P + V +ALED RF ++PLV G PHIR Y G PL G +G LCI+D+ PR F
Sbjct: 88 EGSGP--MAVADALEDPRFSSSPLVCGPPHIRAYLGAPLPTPEGHNIGVLCIMDHAPRAF 145
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYR 483
+ +L + A++V+ +E + I + + R
Sbjct: 146 SSRDGALLTHFAQLVMERLELRRSISEDMLTGACMRR 182
[206][TOP]
>UniRef100_C5V5X6 Sensor protein n=1 Tax=Gallionella ferruginea ES-2
RepID=C5V5X6_9PROT
Length = 834
Score = 122 bits (306), Expect = 1e-26
Identities = 63/162 (38%), Positives = 94/162 (58%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
VLDTE + D + +L + + PIA +SL+D+ RQWFK+ GL ++T R +FCA T+
Sbjct: 22 VLDTELDSALDSMVQLASYICQTPIAAISLIDEHRQWFKASTGLDAKETSRDVAFCAHTI 81
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L E +++ENA D RF +NPLV+ +P IRFYAG PL A G +G+LC+ID PR
Sbjct: 82 LEN--ETMIIENAQLDERFFDNPLVVSAPEIRFYAGVPLAAPEGQHIGTLCVIDRVPRVL 139
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQL 498
E N + +A ++ + + + + L +N QL
Sbjct: 140 SPEQINAIKILANNIMAHLNLNLSHRMSRQHVDSLNLKNAQL 181
[207][TOP]
>UniRef100_Q87WK3 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas
syringae pv. tomato RepID=Q87WK3_PSESM
Length = 607
Score = 122 bits (305), Expect = 2e-26
Identities = 64/143 (44%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L VL+ ++ FD+I + F+ PIALVS+VD+ RQWF++ GL R+T R SFCA
Sbjct: 20 ELCVLEDTSDEVFDEIVAMTAEFFQTPIALVSIVDEHRQWFRARVGLSARETPRNVSFCA 79
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+T+L + + + +A D RF NN LV G P IR+YAG PL+ +GL LGSLC+ID KP
Sbjct: 80 YTILSD--TLFEIPDATLDERFMNNSLVTGHPDIRYYAGAPLITDDGLALGSLCVIDTKP 137
Query: 364 RQ-FDAESCNMLANMAEMVVREI 429
R+ ML A +V++ I
Sbjct: 138 REPMSEHQTQMLKRFASLVMKRI 160
[208][TOP]
>UniRef100_A6V4N9 Cyclic diguanylate phosphodiesterase/diguanylate cyclase n=1
Tax=Pseudomonas aeruginosa PA7 RepID=A6V4N9_PSEA7
Length = 600
Score = 122 bits (305), Expect = 2e-26
Identities = 66/143 (46%), Positives = 91/143 (63%), Gaps = 1/143 (0%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+LG+L+ ++ F+ I F+ PIAL+S++D RQWF++ GL +RQT R+ SFCA
Sbjct: 32 QLGLLEEGVDEVFEAILGAATCYFQTPIALISILDHQRQWFRASIGLGIRQTPRRDSFCA 91
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+ +L + V V +A D RFR+NP VLG P IRFYAG PL T+GL LGSLC+ID +P
Sbjct: 92 YAILGKG--VFEVADARLDPRFRDNPYVLGEPGIRFYAGAPLTTTDGLNLGSLCVIDREP 149
Query: 364 R-QFDAESCNMLANMAEMVVREI 429
R A ML + A +V+ I
Sbjct: 150 RGPLSARDIAMLEHFAGLVMARI 172
[209][TOP]
>UniRef100_C5SKY9 Putative PAS/PAC sensor protein n=1 Tax=Asticcacaulis excentricus
CB 48 RepID=C5SKY9_9CAUL
Length = 306
Score = 122 bits (305), Expect = 2e-26
Identities = 69/152 (45%), Positives = 94/152 (61%), Gaps = 1/152 (0%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LD+E E FD +TRL VF P+A +SL+D RQWFKS GL V +T R+ +FC +
Sbjct: 26 LEILDSEAEPEFDQVTRLAADVFDAPMAAISLIDAIRQWFKSSVGLSVCETPREQAFCDY 85
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
T+ + EV+VV +A +D RF NNP+VLG HIRFYAG P + + +GSLC+ID +PR
Sbjct: 86 TICRD--EVMVVLDATKDPRFANNPMVLGEAHIRFYAGAP-IRFGEVLVGSLCVIDTEPR 142
Query: 367 -QFDAESCNMLANMAEMVVREIEKDKLIEAQK 459
+F A L +A V + K + QK
Sbjct: 143 AEFSARDRARLTTLAATVSSLMTLRKDAQMQK 174
[210][TOP]
>UniRef100_A3VK06 Sensor histidine kinase n=1 Tax=Rhodobacterales bacterium HTCC2654
RepID=A3VK06_9RHOB
Length = 363
Score = 122 bits (305), Expect = 2e-26
Identities = 68/167 (40%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Frame = +1
Query: 1 GKLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFC 180
G LG+LDT E FD +T C P +LVSLVD+DRQWFKS +G +T +SS C
Sbjct: 22 GALGLLDTPAEAGFDSVTAFICRALDVPTSLVSLVDRDRQWFKSAKGFDEPETALESSVC 81
Query: 181 AWTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNK 360
A+ +L + ++L + + +D R NPLV + IRFYAG PL ++G +G+LC ID K
Sbjct: 82 AYVVLED--DLLEIRDLTQDPRTARNPLVAQTDGIRFYAGAPLRLSDGQVMGALCAIDVK 139
Query: 361 PRQFDAESCNMLANMAEMVVREIE-KDKLIEAQKIKSEMLYRENNQL 498
PR+ L +A+ VV ++E K L A+ ++ E+ +R N L
Sbjct: 140 PRELTDIQRETLIVLADQVVAQMELKQALANAETLRKEIDHRVKNSL 186
[211][TOP]
>UniRef100_Q0EE59 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas
syringae pv. actinidiae RepID=Q0EE59_PSESF
Length = 607
Score = 121 bits (304), Expect = 3e-26
Identities = 64/143 (44%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L VL+ ++ FD+I + F+ PIALVS+VD+ RQWF++ GL R+T R SFCA
Sbjct: 20 ELCVLEDTSDEVFDEIVAMTADFFQTPIALVSIVDEHRQWFRARVGLSARETPRNVSFCA 79
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+T+L + + + +A D RF NN LV G P IR+YAG PL+ +GL LGSLC+ID KP
Sbjct: 80 YTILSD--TLFEIPDATLDERFMNNSLVTGHPDIRYYAGAPLITDDGLALGSLCVIDTKP 137
Query: 364 RQ-FDAESCNMLANMAEMVVREI 429
R+ ML A +V++ I
Sbjct: 138 REPMSEHQTQMLKRFASLVMKRI 160
[212][TOP]
>UniRef100_UPI00018735BF GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas
syringae pv. tomato T1 RepID=UPI00018735BF
Length = 607
Score = 121 bits (303), Expect = 3e-26
Identities = 64/143 (44%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L VL+ ++ FD+I + F+ PIALVS+VD+ RQWF++ GL R+T R SFCA
Sbjct: 20 ELCVLEDTSDEVFDEIVAMTAEFFQTPIALVSIVDEHRQWFRARVGLSARETPRNVSFCA 79
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+T+L + + +A D RF NN LV G P IR+YAG PL+ +GL LGSLC+ID KP
Sbjct: 80 YTILSH--TLFEIPDATLDERFMNNSLVTGHPDIRYYAGAPLITDDGLALGSLCVIDTKP 137
Query: 364 RQ-FDAESCNMLANMAEMVVREI 429
R+ ML A +V++ I
Sbjct: 138 REPMSEHQTQMLKRFASLVMKRI 160
[213][TOP]
>UniRef100_Q4UQ32 Histidine kinase/response regulator hybrid protein n=2
Tax=Xanthomonas campestris pv. campestris
RepID=Q4UQ32_XANC8
Length = 286
Score = 121 bits (303), Expect = 3e-26
Identities = 63/136 (46%), Positives = 88/136 (64%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L +LDT E+ FD+ITR + AL+SLVD DRQWFKS GL +T R SFCA
Sbjct: 19 QLDILDTAAEEVFDEITRELAEKLQVSTALISLVDADRQWFKSRVGLDACETSRDVSFCA 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+ E L V +AL D+RF++NPLV G P+IRFYAG PL + NGL +G+LC +D +P
Sbjct: 79 HAV--GAGEALFVHDALTDVRFKDNPLVQGPPYIRFYAGIPLRSENGLVVGTLCALDAQP 136
Query: 364 RQFDAESCNMLANMAE 411
++ + + ++ +AE
Sbjct: 137 KELNEDELRLMNQLAE 152
[214][TOP]
>UniRef100_A3Z292 Multi-sensor Hybrid Histidine Kinase n=1 Tax=Synechococcus sp. WH
5701 RepID=A3Z292_9SYNE
Length = 335
Score = 121 bits (303), Expect = 3e-26
Identities = 67/140 (47%), Positives = 82/140 (58%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDTE + D IT L PIAL+SLVD++RQWF S GL QT R +FCA +
Sbjct: 39 LLDTESDADLDRITTLASETLDTPIALISLVDRERQWFLSRVGLEASQTPRSMAFCAHAI 98
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
LVV +AL+D RF NPLV+ P IRFYAG L +G LG+LC+ID PRQF
Sbjct: 99 T--QCSTLVVPDALDDPRFNTNPLVVSEPKIRFYAGAQLRPQDGQALGTLCVIDRTPRQF 156
Query: 373 DAESCNMLANMAEMVVREIE 432
+ L +E V REIE
Sbjct: 157 SPRQLHWLQLFSEQVSREIE 176
[215][TOP]
>UniRef100_Q5WWB5 Putative uncharacterized protein n=1 Tax=Legionella pneumophila
str. Lens RepID=Q5WWB5_LEGPL
Length = 431
Score = 120 bits (302), Expect = 4e-26
Identities = 65/173 (37%), Positives = 93/173 (53%), Gaps = 11/173 (6%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L +LDT ++RFD I RL PIA +S +D QWFKS G+ + + R SFC
Sbjct: 41 ELKILDTPADERFDRIIRLTSGYLSVPIAFISFIDSKHQWFKSSCGIGLNKISRNDSFCH 100
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+T+ P +++ +AL D RF NNP V SP+IRFYAG PL +G +G+LC ID KP
Sbjct: 101 YTIQQNKP--MIISDALLDERFCNNPYVTNSPNIRFYAGFPLSTVDGFNIGTLCAIDKKP 158
Query: 364 RQFDAESCNMLANMAEMVVREIE-----------KDKLIEAQKIKSEMLYREN 489
R D +L ++A + ++ ++K I K K E+ R N
Sbjct: 159 RNLDETEIQILKDLATLAEDQVNLLDISLLERAVREKNISLTKAKKELEMRNN 211
[216][TOP]
>UniRef100_B0RTT3 Signaling protein n=3 Tax=Xanthomonas campestris pv. campestris
RepID=B0RTT3_XANCB
Length = 618
Score = 120 bits (302), Expect = 4e-26
Identities = 67/143 (46%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LD+ P+ FD I + + IALVSLVD+ RQWFK+ GL +T RK +FCA
Sbjct: 28 LCLLDSPPDPVFDTIAAMAARMLGTEIALVSLVDEHRQWFKARVGLEAPETPRKHAFCAH 87
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
L + +VLV+ +AL D RF NNPLVLG+PHIRFYAG PL +G +G+LC+I PR
Sbjct: 88 ALRSD--DVLVIPDALLDPRFCNNPLVLGAPHIRFYAGAPLKLRDGHTIGTLCVIGTSPR 145
Query: 367 Q-FDAESCNMLANMAEMVVREIE 432
DAE L + ++ V +E
Sbjct: 146 AGLDAEQRIQLEGLRDLAVLRVE 168
[217][TOP]
>UniRef100_A3SL77 Putative two-component system sensor histidine kinase n=1
Tax=Roseovarius nubinhibens ISM RepID=A3SL77_9RHOB
Length = 370
Score = 120 bits (302), Expect = 4e-26
Identities = 62/164 (37%), Positives = 98/164 (59%), Gaps = 1/164 (0%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LDT E+ FD++ L + PI++++ +D DRQWFK+ GL VR+T +S C+
Sbjct: 20 GILDTAREEDFDEVVALAAQICDVPISVINFIDADRQWFKAEVGLGVRETPIDTSICSHV 79
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
+L E + +++ N LED R ++NPL L P +RFYAG L + +GL LG+LC++DN PR
Sbjct: 80 ILEE--DFVLIPNTLEDPRMQDNPLCLDEPGLRFYAGALLKSKDGLPLGTLCVLDNSPRT 137
Query: 370 FDAESCNMLANMAEMVVREIE-KDKLIEAQKIKSEMLYRENNQL 498
L +A V+ ++ + L EA ++ E+ +R N L
Sbjct: 138 LTEAQITALRVLANQVMAQLNLRKSLREADMLRREVDHRVKNSL 181
[218][TOP]
>UniRef100_Q5ZVF0 Adenylate cyclase PLUS two component hybrid sensor and regulator
n=1 Tax=Legionella pneumophila subsp. pneumophila str.
Philadelphia 1 RepID=Q5ZVF0_LEGPH
Length = 441
Score = 120 bits (301), Expect = 6e-26
Identities = 64/173 (36%), Positives = 93/173 (53%), Gaps = 11/173 (6%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L +LDT P++RFD I RL PIA +S +D + QWFKS G+ + + R SFC
Sbjct: 51 ELKILDTPPDERFDRIIRLTSGYLSVPIAFISFIDSEHQWFKSSCGIGLNKISRNDSFCH 110
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+T+ P +++ + L D RF NNP V P+IRFYAG PL +G +G+LC ID KP
Sbjct: 111 YTIQQNKP--MIISDTLLDERFCNNPYVTSEPNIRFYAGFPLSTVDGFNVGTLCAIDKKP 168
Query: 364 RQFDAESCNMLANMAEMVVREIE-----------KDKLIEAQKIKSEMLYREN 489
R D +L ++A + ++ ++K I K K E+ R N
Sbjct: 169 RNLDETEIQILKDLATLAEDQLNLLDISLLEKSVREKNISLIKAKKELEMRNN 221
[219][TOP]
>UniRef100_Q2NYT0 Histidine kinase-response regulator hybrid protein n=2
Tax=Xanthomonas oryzae pv. oryzae RepID=Q2NYT0_XANOM
Length = 874
Score = 120 bits (301), Expect = 6e-26
Identities = 67/161 (41%), Positives = 95/161 (59%), Gaps = 3/161 (1%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+LGVLDTE E FDDI L V P+ALVSL+D DRQWFK+ G + T R +SFC+
Sbjct: 23 RLGVLDTEAEAEFDDIAWLAAHVTGAPVALVSLLDADRQWFKARCGSDLEGTPRSASFCS 82
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
++ E++ V +A D RF NNPLV+G+P +R Y G PL+ G G+LC + +P
Sbjct: 83 HAIM--GTELMEVPDAEADPRFVNNPLVVGAPGVRSYVGVPLIGREGYAYGTLCTLSTRP 140
Query: 364 RQFDAESCNMLANMAEMVVREIE--KDKL-IEAQKIKSEML 477
R D + L +A +++E +D+L +AQ+ ML
Sbjct: 141 RVLDEQQKQALIRLARQAAKQLEARRDRLEAQAQRQTLSML 181
[220][TOP]
>UniRef100_Q215A6 Putative GAF sensor protein n=1 Tax=Rhodopseudomonas palustris
BisB18 RepID=Q215A6_RHOPB
Length = 363
Score = 120 bits (301), Expect = 6e-26
Identities = 67/147 (45%), Positives = 88/147 (59%), Gaps = 3/147 (2%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G++DT EK FD +T L V PI+L++L+ RQWFKS QGL + +T R +FC T
Sbjct: 204 GLVDTAAEKSFDRVTWLASHVLGTPISLMTLLTPSRQWFKSRQGLDMVETPRSWAFCNQT 263
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
+L +V VEN D RF +NP V G PH RFYAG P++ NG LGS+C+ID +PR+
Sbjct: 264 ILQR--DVFAVENLALDRRFADNPAVAGDPHFRFYAGAPVLDPNGFALGSVCVIDYEPRR 321
Query: 370 FD---AESCNMLANMAEMVVREIEKDK 441
D ES LA +A VR D+
Sbjct: 322 LDRDQTESLRALAALASDQVRLRANDR 348
[221][TOP]
>UniRef100_B2SMT3 Putative signal protein with GAF,PAS(PAC) and GGDEF domains n=1
Tax=Xanthomonas oryzae pv. oryzae PXO99A
RepID=B2SMT3_XANOP
Length = 874
Score = 120 bits (301), Expect = 6e-26
Identities = 67/161 (41%), Positives = 95/161 (59%), Gaps = 3/161 (1%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+LGVLDTE E FDDI L V P+ALVSL+D DRQWFK+ G + T R +SFC+
Sbjct: 23 RLGVLDTEAEAEFDDIVWLAAHVTGAPVALVSLLDADRQWFKARCGSDLEGTPRSASFCS 82
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
++ E++ V +A D RF NNPLV+G+P +R Y G PL+ G G+LC + +P
Sbjct: 83 HAIM--GTELMEVPDAEADPRFVNNPLVVGAPGVRSYVGVPLIGREGYAYGTLCTLSTRP 140
Query: 364 RQFDAESCNMLANMAEMVVREIE--KDKL-IEAQKIKSEML 477
R D + L +A +++E +D+L +AQ+ ML
Sbjct: 141 RVLDEQQKQALIRLARQAAKQLEARRDRLEAQAQRQTLSML 181
[222][TOP]
>UniRef100_A7MG95 Putative uncharacterized protein n=1 Tax=Cronobacter sakazakii ATCC
BAA-894 RepID=A7MG95_ENTS8
Length = 319
Score = 120 bits (301), Expect = 6e-26
Identities = 66/172 (38%), Positives = 97/172 (56%), Gaps = 4/172 (2%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
+ +LDT ++RF+ +TR+ +F+ P+AL+SL+D++RQW + QGL R+T R SFC
Sbjct: 20 MDLLDTRDDERFERLTRVAKKLFRVPVALISLLDRNRQWLLACQGLNTRETTRDVSFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L E P +V +A D RF +NPLV G P IRFYAG P+ +G +G+LCIID PR
Sbjct: 80 AILQEGP--FIVNDARLDERFHDNPLVTGEPFIRFYAGYPVRLPDGAVVGTLCIIDGTPR 137
Query: 367 QFDAESCNMLANMAEMVVREIEKDKLIEAQKI----KSEMLYRENNQLIRAL 510
F + L ++A +V E + + YR + RAL
Sbjct: 138 DFSDDDIATLKDLAFIVEDEFHVISMAMTDSLTGIPNRRGFYRSGERRFRAL 189
[223][TOP]
>UniRef100_C4ZL18 Response regulator receiver modulated diguanylate
cyclase/phosphodiesterase n=1 Tax=Thauera sp. MZ1T
RepID=C4ZL18_THASP
Length = 737
Score = 120 bits (301), Expect = 6e-26
Identities = 66/143 (46%), Positives = 88/143 (61%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L VLDT E D I RL + + P+ ++SLVD RQWFK+ G+ V+ T R SFCA
Sbjct: 135 QLQVLDTRAEPALDAIARLAARIAEAPVGVISLVDTHRQWFKARVGVEVQTTSRSVSFCA 194
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
LL + + VE+A D RF +NPLV G P IRFYAG PLV G +G+LC+ID++P
Sbjct: 195 HALLGDG--LFEVEDATLDPRFADNPLVRGDPGIRFYAGMPLVMPGGEVVGTLCVIDSRP 252
Query: 364 RQFDAESCNMLANMAEMVVREIE 432
R+ A + LA +A V E+E
Sbjct: 253 RRLGATAREALAVLARSVTDELE 275
[224][TOP]
>UniRef100_C1ZBJ1 Serine phosphatase RsbU, regulator of sigma subunit n=1
Tax=Planctomyces limnophilus DSM 3776 RepID=C1ZBJ1_PLALI
Length = 422
Score = 120 bits (301), Expect = 6e-26
Identities = 67/153 (43%), Positives = 92/153 (60%), Gaps = 2/153 (1%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L +LDT PE R+D I R V+K PIA +SLVD+DRQWFK+ GL + +T R SFC
Sbjct: 20 LELLDTPPEDRYDSIIRALRAVYKVPIAYISLVDRDRQWFKARVGLEILETPRSISFCGH 79
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP- 363
+ + P LVV + +D RF +NP+VL +PH+RFYAG L G +G+LC+ D P
Sbjct: 80 AIAQQEP--LVVPDLTQDSRFADNPMVLEAPHLRFYAGLRLSGPTGQPVGTLCMADTVPF 137
Query: 364 -RQFDAESCNMLANMAEMVVREIEKDKLIEAQK 459
+ FD LA++ E + ++ LI AQK
Sbjct: 138 EKPFDDAPLKELAHLVEQQFQMLD---LISAQK 167
[225][TOP]
>UniRef100_Q5KPB6 Two-component sensor molecule, putative n=1 Tax=Filobasidiella
neoformans RepID=Q5KPB6_CRYNE
Length = 1617
Score = 120 bits (301), Expect = 6e-26
Identities = 66/150 (44%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+ +L + P+ F+ I + LVF L++L+D D QWFKS G V Q R SSFCA
Sbjct: 551 RFSILHSAPDINFNRIAHMTKLVFNPKAVLITLIDSDTQWFKSQSGFTVEQGGRISSFCA 610
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
T+LP E VV + D RF NNP V+G IRFYAG PL +G +G+LCI+D+KP
Sbjct: 611 HTILPRTDEPFVVLDTSSDWRFENNPNVVGPNSIRFYAGAPLRTADGFNVGALCILDDKP 670
Query: 364 R-QFDAESCNMLANMAEMVVREIE--KDKL 444
R +F S +L A + +RE+E +DKL
Sbjct: 671 RTEFPPRSRLILKEFAAVTMREMELWRDKL 700
[226][TOP]
>UniRef100_Q560B3 Putative uncharacterized protein n=1 Tax=Filobasidiella neoformans
RepID=Q560B3_CRYNE
Length = 1614
Score = 120 bits (301), Expect = 6e-26
Identities = 66/150 (44%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+ +L + P+ F+ I + LVF L++L+D D QWFKS G V Q R SSFCA
Sbjct: 548 RFSILHSAPDINFNRIAHMTKLVFNPKAVLITLIDSDTQWFKSQSGFTVEQGGRISSFCA 607
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
T+LP E VV + D RF NNP V+G IRFYAG PL +G +G+LCI+D+KP
Sbjct: 608 HTILPRTDEPFVVLDTSSDWRFENNPNVVGPNSIRFYAGAPLRTADGFNVGALCILDDKP 667
Query: 364 R-QFDAESCNMLANMAEMVVREIE--KDKL 444
R +F S +L A + +RE+E +DKL
Sbjct: 668 RTEFPPRSRLILKEFAAVTMREMELWRDKL 697
[227][TOP]
>UniRef100_A2V6A7 CnHHK5 protein n=1 Tax=Filobasidiella neoformans RepID=A2V6A7_CRYNE
Length = 1627
Score = 120 bits (301), Expect = 6e-26
Identities = 66/150 (44%), Positives = 89/150 (59%), Gaps = 3/150 (2%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+ +L + P+ F+ I + LVF L++L+D D QWFKS G V Q R SSFCA
Sbjct: 561 RFSILHSAPDINFNRIAHMTKLVFNPKAVLITLIDSDTQWFKSQSGFTVEQGGRISSFCA 620
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
T+LP E VV + D RF NNP V+G IRFYAG PL +G +G+LCI+D+KP
Sbjct: 621 HTILPRTDEPFVVLDTSSDWRFENNPNVVGPNSIRFYAGAPLRTADGFNVGALCILDDKP 680
Query: 364 R-QFDAESCNMLANMAEMVVREIE--KDKL 444
R +F S +L A + +RE+E +DKL
Sbjct: 681 RTEFPPRSRLILKEFAAVTMREMELWRDKL 710
[228][TOP]
>UniRef100_A3L8S2 Putative uncharacterized protein n=2 Tax=Pseudomonas aeruginosa
RepID=A3L8S2_PSEAE
Length = 587
Score = 120 bits (300), Expect = 7e-26
Identities = 65/143 (45%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+LG+L+ ++ F++I F+ PIAL+S++D RQWF++ GL +RQT R+ SFCA
Sbjct: 19 QLGLLEEGADEVFEEILAAATSYFQTPIALISILDHQRQWFRASIGLDIRQTPRRDSFCA 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+ +L + V V +A D RFR+NP V G P IRFYAG PL GL LGSLC+ID +P
Sbjct: 79 YAILGKG--VFEVADATLDPRFRDNPYVQGEPRIRFYAGAPLATAEGLNLGSLCVIDREP 136
Query: 364 RQFDAE-SCNMLANMAEMVVREI 429
R AE ML + A +V+ I
Sbjct: 137 RGPLAERDVAMLEHFARLVMARI 159
[229][TOP]
>UniRef100_Q9I0R8 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa
RepID=Q9I0R8_PSEAE
Length = 587
Score = 120 bits (300), Expect = 7e-26
Identities = 65/143 (45%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+LG+L+ ++ F++I F+ PIAL+S++D RQWF++ GL +RQT R+ SFCA
Sbjct: 19 QLGLLEEGADEVFEEILAAATSYFQTPIALISILDHQRQWFRASIGLDIRQTPRRDSFCA 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+ +L + V V +A D RFR+NP V G P IRFYAG PL GL LGSLC+ID +P
Sbjct: 79 YAILGKG--VFEVADATLDPRFRDNPYVQGEPRIRFYAGAPLATAEGLNLGSLCVIDREP 136
Query: 364 RQFDAE-SCNMLANMAEMVVREI 429
R AE ML + A +V+ I
Sbjct: 137 RGPLAERDVAMLEHFARLVMARI 159
[230][TOP]
>UniRef100_Q5X574 Putative uncharacterized protein n=1 Tax=Legionella pneumophila
str. Paris RepID=Q5X574_LEGPA
Length = 441
Score = 120 bits (300), Expect = 7e-26
Identities = 65/173 (37%), Positives = 93/173 (53%), Gaps = 11/173 (6%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L +LDT ++RFD I RL PIA +S +D QWFKS G+ + + R SFC
Sbjct: 51 ELKILDTPADERFDRIIRLTSGYLSVPIAFISFIDSKHQWFKSSCGIGLNKISRNDSFCH 110
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+T+ P +++ +AL D RF NNP V SP+IRFYAG PL +G +G+LC ID KP
Sbjct: 111 YTIQQSKP--MIIPDALLDERFCNNPYVTNSPNIRFYAGFPLSTVDGFNVGTLCAIDKKP 168
Query: 364 RQFDAESCNMLANMAEMVVREIE-----------KDKLIEAQKIKSEMLYREN 489
R D +L ++A + ++ ++K I K K E+ R N
Sbjct: 169 RNLDETEIQILKDLATLAEDQVNLLDISLLERAVREKNISLTKAKKELEMRNN 221
[231][TOP]
>UniRef100_A3KUW4 Putative uncharacterized protein n=1 Tax=Pseudomonas aeruginosa
C3719 RepID=A3KUW4_PSEAE
Length = 587
Score = 120 bits (300), Expect = 7e-26
Identities = 65/143 (45%), Positives = 90/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+LG+L+ ++ F++I F+ PIAL+S++D RQWF++ GL +RQT R+ SFCA
Sbjct: 19 QLGLLEEGADEVFEEILAAATSYFQTPIALISILDHQRQWFRASIGLDIRQTPRRDSFCA 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+ +L + V V +A D RFR+NP V G P IRFYAG PL GL LGSLC+ID +P
Sbjct: 79 YAILGKG--VFEVADATLDPRFRDNPYVQGEPRIRFYAGAPLATAEGLNLGSLCVIDREP 136
Query: 364 RQFDAE-SCNMLANMAEMVVREI 429
R AE ML + A +V+ I
Sbjct: 137 RGPLAERDVAMLEHFARLVMARI 159
[232][TOP]
>UniRef100_Q7NK26 Gll1654 protein n=1 Tax=Gloeobacter violaceus RepID=Q7NK26_GLOVI
Length = 377
Score = 119 bits (299), Expect = 1e-25
Identities = 63/150 (42%), Positives = 93/150 (62%), Gaps = 1/150 (0%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
VLDT E FDDI + PI+L+SL+D+DRQWFK+ G+ V+QT R+ +FC +
Sbjct: 21 VLDTPAEAVFDDIVEIAARQCHMPISLISLIDRDRQWFKARVGVEVQQTPRELAFCTHAI 80
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L E +V +A D RF NPLV+ SP +RFYAG PLV + LG+LC++D +PR+F
Sbjct: 81 LQR--ETFIVPDARIDERFSTNPLVIHSPQVRFYAGTPLVTPDNRALGTLCVLDYQPREF 138
Query: 373 DAESCNMLANMAEMVVREIE-KDKLIEAQK 459
+ + L ++ V+ +E + KL+ Q+
Sbjct: 139 PPDQQDRLWHLNRQVMMYLELRRKLLALQQ 168
[233][TOP]
>UniRef100_Q1QZF1 Diguanylate cyclase/phosphodiesterase with GAF sensor n=1
Tax=Chromohalobacter salexigens DSM 3043
RepID=Q1QZF1_CHRSD
Length = 781
Score = 119 bits (299), Expect = 1e-25
Identities = 60/141 (42%), Positives = 88/141 (62%)
Frame = +1
Query: 10 GVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWT 189
G+LDT PE+RFD +TR+ ++ L +L+D RQWFKS Q L + T R+ +FC +T
Sbjct: 18 GLLDTPPEERFDRVTRIAKQHYQVDTTLFTLIDAKRQWFKSKQNLALDATPRRHAFCDYT 77
Query: 190 LLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
+ + V VVE+A D F NPLV +PHIRFYAG P+ +G ++G+LC+ID+ PR
Sbjct: 78 I--QQNSVFVVEDAANDPLFFKNPLVTDTPHIRFYAGVPVRDPSGFKIGTLCLIDSTPRD 135
Query: 370 FDAESCNMLANMAEMVVREIE 432
++L N+A M+ +E
Sbjct: 136 ASHMDFSILRNLAAMLEESLE 156
[234][TOP]
>UniRef100_C6CGY3 Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
sensor(S) n=1 Tax=Dickeya zeae Ech1591
RepID=C6CGY3_DICZE
Length = 722
Score = 119 bits (299), Expect = 1e-25
Identities = 62/141 (43%), Positives = 91/141 (64%), Gaps = 1/141 (0%)
Frame = +1
Query: 40 FDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTLLPEHPEVLV 219
FD++ L VF PI L+SLV+K+RQ F + G+PV +T R SFCA +L + ++V
Sbjct: 31 FDNLINLAANVFNVPIVLISLVEKERQLFAASIGMPVCETSRDESFCAHAILKKR--IMV 88
Query: 220 VENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR-QFDAESCNML 396
+ + +D RF++NPLV+G PHIRFYAG PL +G +G LCIIDNKPR A + L
Sbjct: 89 IPDTRKDPRFKDNPLVIGEPHIRFYAGIPLRTPSGFPIGVLCIIDNKPRASLSARDAHNL 148
Query: 397 ANMAEMVVREIEKDKLIEAQK 459
+ A +V+ ++E +L A++
Sbjct: 149 QDFAALVMDKLEMRRLDLARR 169
[235][TOP]
>UniRef100_B7V6Y2 Putative EAL domain n=1 Tax=Pseudomonas aeruginosa LESB58
RepID=B7V6Y2_PSEA8
Length = 587
Score = 119 bits (299), Expect = 1e-25
Identities = 65/143 (45%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+LG+L+ ++ F++I F+ PIAL+S++D RQWF++ GL +RQT R+ SFCA
Sbjct: 19 QLGLLEEGADEVFEEILAAATSYFQTPIALISILDHQRQWFRASIGLDIRQTPRRDSFCA 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+ +L + V V +A D RFR NP V G P IRFYAG PL GL LGSLC+ID +P
Sbjct: 79 YAILGKG--VFEVADATLDPRFRGNPYVQGEPRIRFYAGAPLATAEGLNLGSLCVIDREP 136
Query: 364 RQFDAE-SCNMLANMAEMVVREI 429
R AE ML + A +V+ I
Sbjct: 137 RGPLAERDVAMLEHFARLVMARI 159
[236][TOP]
>UniRef100_Q26DS7 Sensor protein n=1 Tax=Flavobacteria bacterium BBFL7
RepID=Q26DS7_9BACT
Length = 402
Score = 119 bits (299), Expect = 1e-25
Identities = 69/166 (41%), Positives = 105/166 (63%), Gaps = 1/166 (0%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
K +LDT PE+ +D+IT + + + PI+L++LVDKDR + KS QG+ + ++ R SFC
Sbjct: 19 KYQLLDTMPEENYDNITSIISSICEAPISLITLVDKDRNFLKSRQGVDLSESPRDISFCG 78
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
++ E E+++V +A ED RF++NPLV G I FYAG PLV NG +LG+LC+ D+KP
Sbjct: 79 HAIVSEE-EIMIVTDAREDERFKDNPLVEGLDAI-FYAGVPLVDVNGYKLGTLCVYDHKP 136
Query: 364 RQFDAESCNMLANMAEMVVREI-EKDKLIEAQKIKSEMLYRENNQL 498
R + L MA+ V+ E+ K E ++I S +L N++L
Sbjct: 137 RVLTNHQISALKAMAKQVMSLFEERFKTFELERIGS-ILKDRNDEL 181
[237][TOP]
>UniRef100_A6EHA0 Sensor protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EHA0_9SPHI
Length = 814
Score = 119 bits (299), Expect = 1e-25
Identities = 66/171 (38%), Positives = 101/171 (59%), Gaps = 4/171 (2%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+L++ E +D IT+L ++ PI+L++L+D+ RQWFKS GL + +T R+ +FC +T+
Sbjct: 24 ILNSISELEYDRITQLAAIICNVPISLITLIDETRQWFKSRTGLEISETPREVAFCQYTI 83
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
+ EV V + D RFR+N LV G P IRFYAG PL +G LG+LC+ID KP Q
Sbjct: 84 MDR--EVFEVPDTWNDERFRSNVLVTGDPGIRFYAGYPLTDPDGYALGTLCVIDRKPNQL 141
Query: 373 DAESCNML----ANMAEMVVREIEKDKLIEAQKIKSEMLYRENNQLIRALD 513
+ L A + +++V +K++L +KI +R +N LI D
Sbjct: 142 TPQQHTALRLLSAEVMQLIVERRQKEELKNFEKI-----FRLSNDLICVSD 187
[238][TOP]
>UniRef100_UPI0001AF4C5A GAF domain/GGDEF domain/EAL domain-containing protein n=1
Tax=Pseudomonas syringae pv. oryzae str. 1_6
RepID=UPI0001AF4C5A
Length = 607
Score = 119 bits (298), Expect = 1e-25
Identities = 65/143 (45%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L VLD + D+I + F+ PI+LVS+VD++RQWF++ GL R+T R SFCA
Sbjct: 20 ELCVLDDTSDDVLDEIVAMTAEFFQAPISLVSIVDENRQWFRARVGLKPRETPRNVSFCA 79
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+T+L + P V +A D RF NN LV G P IR+YAG PL+ +GL LGSLC+ID KP
Sbjct: 80 YTILSDVP--FEVPDATIDERFVNNGLVTGHPDIRYYAGAPLITDDGLALGSLCVIDTKP 137
Query: 364 RQ-FDAESCNMLANMAEMVVREI 429
R+ ML A +V++ I
Sbjct: 138 REPMSEHQMLMLKRFASLVMKRI 160
[239][TOP]
>UniRef100_B1ZLF4 Signal transduction histidine kinase n=1 Tax=Methylobacterium
populi BJ001 RepID=B1ZLF4_METPB
Length = 829
Score = 119 bits (298), Expect = 1e-25
Identities = 68/154 (44%), Positives = 95/154 (61%), Gaps = 4/154 (2%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT E +DDI L C + P+ALVSLV DRQWFK+ G P +TD SS CA+ L
Sbjct: 24 ILDTPAEPGYDDIVALACRLCAVPVALVSLVTGDRQWFKARAGFPACETDLNSSVCAYAL 83
Query: 193 LPEHP-EVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQ 369
E P E+L++ + D R NPLV+G P IRFYAG PLV G LGSLC+ID++PR
Sbjct: 84 --EQPDELLIIPDLTADPRTSANPLVVGEPFIRFYAGAPLVTPEGQVLGSLCVIDHQPRP 141
Query: 370 ---FDAESCNMLANMAEMVVREIEKDKLIEAQKI 462
D ++ ++ A +A V+ ++E + + A+ +
Sbjct: 142 EGLTDTQADDLRA-LARQVMTQLELRRALLARDL 174
[240][TOP]
>UniRef100_A5IBY1 Adenylate cyclase PLUS two component hybrid sensor and regulator
n=1 Tax=Legionella pneumophila str. Corby
RepID=A5IBY1_LEGPC
Length = 441
Score = 119 bits (298), Expect = 1e-25
Identities = 65/173 (37%), Positives = 93/173 (53%), Gaps = 11/173 (6%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L +LDT ++RFD I RL PIA +S +D QWFKS G+ + + R SFC
Sbjct: 51 ELKILDTPADERFDRIIRLTSGYLSVPIAFISFIDSKHQWFKSSCGIGLNKISRNDSFCH 110
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+T+ P +++ +AL D RF NNP V SP+IRFYAG PL +G +G+LC ID KP
Sbjct: 111 YTIQQNKP--MIIPDALLDERFCNNPYVTNSPNIRFYAGFPLSTFDGFNVGTLCAIDKKP 168
Query: 364 RQFDAESCNMLANMAEMVVREIE-----------KDKLIEAQKIKSEMLYREN 489
R D +L ++A + ++ ++K I K K E+ R N
Sbjct: 169 RNLDETEIQILKDLATLAEDQVNLLDISLLEKTVREKNISLTKAKKELEMRNN 221
[241][TOP]
>UniRef100_Q4UVQ7 Putative uncharacterized protein n=2 Tax=Xanthomonas campestris pv.
campestris RepID=Q4UVQ7_XANC8
Length = 334
Score = 119 bits (297), Expect = 2e-25
Identities = 60/140 (42%), Positives = 85/140 (60%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE +DDIT + + P+AL+SL+D+DRQWFKS G+ +T R +FCA +
Sbjct: 21 ILDTAPEPLYDDITAAAAQLCRTPMALISLIDQDRQWFKSRVGMQPAETPRDLAFCAHAI 80
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + +++ V + D RF N LV G P IRFYAG PL+ ++G+ LG+LC++D PR
Sbjct: 81 L-QPDQMMEVGDTFVDPRFARNALVTGGPQIRFYAGAPLLTSDGVALGTLCVLDRAPRTL 139
Query: 373 DAESCNMLANMAEMVVREIE 432
L +A VV IE
Sbjct: 140 SDAERTALQALARQVVTTIE 159
[242][TOP]
>UniRef100_B0RRX7 Putative sensor protein n=1 Tax=Xanthomonas campestris pv.
campestris str. B100 RepID=B0RRX7_XANCB
Length = 377
Score = 119 bits (297), Expect = 2e-25
Identities = 60/140 (42%), Positives = 85/140 (60%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE +DDIT + + P+AL+SL+D+DRQWFKS G+ +T R +FCA +
Sbjct: 64 ILDTAPEPLYDDITAAAAQLCRTPMALISLIDQDRQWFKSRVGMQPAETPRDLAFCAHAI 123
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + +++ V + D RF N LV G P IRFYAG PL+ ++G+ LG+LC++D PR
Sbjct: 124 L-QPDQMMEVGDTFVDPRFARNALVTGGPQIRFYAGAPLLTSDGVALGTLCVLDRAPRTL 182
Query: 373 DAESCNMLANMAEMVVREIE 432
L +A VV IE
Sbjct: 183 SDAERTALQALARQVVTTIE 202
[243][TOP]
>UniRef100_C4T4U8 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Yersinia intermedia
ATCC 29909 RepID=C4T4U8_YERIN
Length = 631
Score = 119 bits (297), Expect = 2e-25
Identities = 63/137 (45%), Positives = 83/137 (60%)
Frame = +1
Query: 7 LGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAW 186
L VLD D +TRL F IALVSLVD+DRQWF S GL V++T R SFC
Sbjct: 26 LSVLDATGVTNLDQVTRLAAKFFGVEIALVSLVDRDRQWFLSRVGLEVQETARDISFCGH 85
Query: 187 TLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPR 366
+L +V + L D+RF +NPLV G PHIRFYAG PL++ GL +G+LC+I ++PR
Sbjct: 86 AILQSG--TFIVPDTLTDLRFSDNPLVTGYPHIRFYAGQPLLSLKGLPMGTLCLIAHQPR 143
Query: 367 QFDAESCNMLANMAEMV 417
F + L + + +V
Sbjct: 144 AFSPQDVTDLCDFSAIV 160
[244][TOP]
>UniRef100_Q48E25 GAF domain/GGDEF domain/EAL domain protein n=1 Tax=Pseudomonas
syringae pv. phaseolicola 1448A RepID=Q48E25_PSE14
Length = 620
Score = 118 bits (296), Expect = 2e-25
Identities = 61/143 (42%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
Frame = +1
Query: 4 KLGVLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCA 183
+L VL+ + FD+I + F+ PIAL+S+VD+ RQWF++ GL ++T R SFCA
Sbjct: 33 ELCVLENTSDDVFDEIVAMTADFFQTPIALISIVDEHRQWFRARVGLNAQETPRNVSFCA 92
Query: 184 WTLLPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP 363
+T+L + + + +A D RF NN LV G P IR+YAG PL+ +G+ LGSLC+ID KP
Sbjct: 93 YTILSD--SLFEIPDATLDDRFMNNSLVTGHPDIRYYAGAPLITDDGIALGSLCVIDTKP 150
Query: 364 RQ-FDAESCNMLANMAEMVVREI 429
R+ ML A +V++ I
Sbjct: 151 REPMSEHQMQMLKRFASLVMKRI 173
[245][TOP]
>UniRef100_Q3BRB1 Putative sensor protein n=1 Tax=Xanthomonas campestris pv.
vesicatoria str. 85-10 RepID=Q3BRB1_XANC5
Length = 375
Score = 118 bits (296), Expect = 2e-25
Identities = 63/139 (45%), Positives = 86/139 (61%), Gaps = 3/139 (2%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
VLDT E+ FDD+T + + + +A V LVD+DRQWFKS G P + R SFCA +
Sbjct: 41 VLDTPAERAFDDLTMIASTLCETQMAAVVLVDEDRQWFKSAHGAPRSEAPRDISFCAHAI 100
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKP--- 363
L EVL+V++ L D RF +NP+V+GS +RFYAG PLV + GL LGSLC+ D P
Sbjct: 101 L-RPDEVLMVDDTLLDPRFHDNPMVVGSGGVRFYAGAPLVTSQGLALGSLCVFDQTPAHL 159
Query: 364 RQFDAESCNMLANMAEMVV 420
R+ E+ L+ A ++
Sbjct: 160 REDQREALQALSRQASQLL 178
[246][TOP]
>UniRef100_C4UJK6 Diguanylate cyclase with PAS/PAC sensor n=1 Tax=Yersinia ruckeri
ATCC 29473 RepID=C4UJK6_YERRU
Length = 589
Score = 118 bits (296), Expect = 2e-25
Identities = 64/155 (41%), Positives = 94/155 (60%), Gaps = 1/155 (0%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT+ ++ D ITRL F IAL+SL+D+DRQWF S GL VR+T R SFC +
Sbjct: 1 MLDTKSVEKLDRITRLAAKYFNVSIALISLIDRDRQWFLSRSGLDVRETPRNISFCGHAI 60
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + L+V + D RF +NPLV P I FYAG PL + +GL LG+LCIID+ P++F
Sbjct: 61 LQR--DALIVPDTAADPRFFDNPLVTAGPKIGFYAGQPLFSLDGLPLGTLCIIDSSPKEF 118
Query: 373 DAESCNMLANMAEMVVREIEKDKL-IEAQKIKSEM 474
+ + L + + ++ + +L I +KS++
Sbjct: 119 SRDMASDLHDFSAIIEEYLRGIELNIYTDSLKSDL 153
[247][TOP]
>UniRef100_Q8PJT4 Putative uncharacterized protein n=1 Tax=Xanthomonas axonopodis pv.
citri RepID=Q8PJT4_XANAC
Length = 346
Score = 118 bits (295), Expect = 3e-25
Identities = 65/162 (40%), Positives = 93/162 (57%), Gaps = 3/162 (1%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE +D T + V + P+AL+SLVD RQWFKS G+ +T R+ SFCA +
Sbjct: 30 LLDTSPEPSYDAFTSIAAAVCRMPMALISLVDTHRQWFKSRIGMQQNETPRELSFCAHAI 89
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L E +V+ V + D RF N LV G P IRFYAG PL+ +G+ LG+LC++D PR+
Sbjct: 90 L-EPDQVMEVGDTHLDERFVGNALVTGEPQIRFYAGAPLLTPDGIALGTLCVLDRVPRRL 148
Query: 373 DAESCNMLANMAEMVVREIEKD---KLIEAQKIKSEMLYREN 489
+ L +A VV +E +L+E ++ + R N
Sbjct: 149 SVAERDALQALARQVVSTLELQQAARLVELDALRDALTGRWN 190
[248][TOP]
>UniRef100_Q3BSA9 Putative sensor protein n=1 Tax=Xanthomonas campestris pv.
vesicatoria str. 85-10 RepID=Q3BSA9_XANC5
Length = 361
Score = 118 bits (295), Expect = 3e-25
Identities = 66/162 (40%), Positives = 93/162 (57%), Gaps = 3/162 (1%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PE +D T + + P+AL+SLVD RQWFKS G+ +T R+ SFCA +
Sbjct: 45 LLDTAPEPSYDAFTSIAAALCGMPMALISLVDTHRQWFKSRLGMQQSETPRELSFCAHAI 104
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L E +V+ V + D RF N LV G P IRFYAG PL+ +G+ LG+LC++D PR+
Sbjct: 105 L-EPDQVMEVGDTHLDKRFARNALVTGEPQIRFYAGAPLLTPDGIALGTLCVLDRVPRRL 163
Query: 373 DAESCNMLANMAEMVVREIEKD---KLIEAQKIKSEMLYREN 489
A + L +A VV IE +L+E ++ + R N
Sbjct: 164 SATERDALQALARQVVSTIELQQAARLVELDALRDALTGRWN 205
[249][TOP]
>UniRef100_B9K196 Signal transduction histidine kinase n=1 Tax=Agrobacterium vitis S4
RepID=B9K196_AGRVS
Length = 677
Score = 118 bits (295), Expect = 3e-25
Identities = 63/157 (40%), Positives = 97/157 (61%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
VLDT EK FDDI L + PIA+V+L+D RQ+FK+ GL VR+T SSFCA +
Sbjct: 26 VLDTPREKDFDDIAALASRICATPIAVVNLIDDSRQFFKAEVGLGVRETPFDSSFCAKAI 85
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIIDNKPRQF 372
L + + L++ +A +D RF NPLV G PH+RFYAG L + L +G++C++ +P+Q
Sbjct: 86 LED--DFLMIPDASQDSRFNRNPLVTGEPHLRFYAGAVLKTADNLPIGTVCVLGFEPKQL 143
Query: 373 DAESCNMLANMAEMVVREIEKDKLIEAQKIKSEMLYR 483
D + L +A V+ ++E K ++ + ++E+ R
Sbjct: 144 DELQQDTLKVLARQVMVQLELRKALKEKAREAEVQRR 180
[250][TOP]
>UniRef100_Q0G2R6 Putative signal transduction histidine kinase with GAF domain n=1
Tax=Fulvimarina pelagi HTCC2506 RepID=Q0G2R6_9RHIZ
Length = 694
Score = 118 bits (295), Expect = 3e-25
Identities = 65/142 (45%), Positives = 86/142 (60%), Gaps = 2/142 (1%)
Frame = +1
Query: 13 VLDTEPEKRFDDITRLCCLVFKCPIALVSLVDKDRQWFKSVQGLPVRQTDRKSSFCAWTL 192
+LDT PEK FDDI L +F P+ALVSLVD+ RQWFK+ G + +T S CA L
Sbjct: 45 ILDTPPEKGFDDIVHLARRLFDVPVALVSLVDRHRQWFKARSGFELSETPIAQSVCAHAL 104
Query: 193 LPEHPEVLVVENALEDIRFRNNPLVLGSPHIRFYAGCPLVATNGLRLGSLCIID--NKPR 366
+VLV+ + +D+R +N LV G P IRFYAG PLV +G LG+LCIID ++P+
Sbjct: 105 --SSRDVLVIPDLTKDLRTASNTLVTGEPKIRFYAGAPLVTPDGHVLGTLCIIDVVSRPQ 162
Query: 367 QFDAESCNMLANMAEMVVREIE 432
F L +A+ VV +E
Sbjct: 163 GFSVNQAEDLKKLADQVVALLE 184