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[1][TOP] >UniRef100_A8IY03 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii RepID=A8IY03_CHLRE Length = 1161 Score = 177 bits (448), Expect = 4e-43 Identities = 87/87 (100%), Positives = 87/87 (100%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ Sbjct: 413 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 472 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 FEKTRKVSGPRALHPSQWGMLCPADTP Sbjct: 473 FEKTRKVSGPRALHPSQWGMLCPADTP 499 [2][TOP] >UniRef100_Q01FH9 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri RepID=Q01FH9_OSTTA Length = 2569 Score = 150 bits (380), Expect = 3e-35 Identities = 70/87 (80%), Positives = 80/87 (91%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 QFD+ K IR DT++ GLE A+SSGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQ Sbjct: 439 QFDILKCIRQDTLSNGLEHAISSGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQ 498 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 FEKTRKVSGPRAL PSQWGMLCP+DTP Sbjct: 499 FEKTRKVSGPRALQPSQWGMLCPSDTP 525 [3][TOP] >UniRef100_C1N4K3 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N4K3_9CHLO Length = 1197 Score = 150 bits (380), Expect = 3e-35 Identities = 70/87 (80%), Positives = 80/87 (91%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 QFD+ K IR DT++ GLE A+SSGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQ Sbjct: 461 QFDIIKCIRQDTLSNGLEHAISSGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQ 520 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 FEKTRKVSGPRAL PSQWGMLCP+DTP Sbjct: 521 FEKTRKVSGPRALQPSQWGMLCPSDTP 547 [4][TOP] >UniRef100_C1FIF0 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299 RepID=C1FIF0_9CHLO Length = 1159 Score = 150 bits (380), Expect = 3e-35 Identities = 70/87 (80%), Positives = 80/87 (91%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 QFD+ K IR DT++ GLE A+SSGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQ Sbjct: 423 QFDIIKCIRQDTLSNGLEHAISSGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQ 482 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 FEKTRKVSGPRAL PSQWGMLCP+DTP Sbjct: 483 FEKTRKVSGPRALQPSQWGMLCPSDTP 509 [5][TOP] >UniRef100_A4RS40 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4RS40_OSTLU Length = 1146 Score = 150 bits (380), Expect = 3e-35 Identities = 70/87 (80%), Positives = 80/87 (91%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 QFD+ K IR DT++ GLE A+SSGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQ Sbjct: 409 QFDILKCIRQDTLSNGLEHAISSGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQ 468 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 FEKTRKVSGPRAL PSQWGMLCP+DTP Sbjct: 469 FEKTRKVSGPRALQPSQWGMLCPSDTP 495 [6][TOP] >UniRef100_A9RNX6 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RNX6_PHYPA Length = 1135 Score = 145 bits (365), Expect = 2e-33 Identities = 67/87 (77%), Positives = 78/87 (89%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 QFD+ K IR DT+T GLE A+SSGNW ++RF+M+RKGVTQV+SRLSFIAA+G MTR++SQ Sbjct: 386 QFDIIKLIRPDTLTNGLEHAISSGNWAVKRFKMDRKGVTQVVSRLSFIAALGHMTRISSQ 445 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 FEKTRKVSGPRAL PSQWGMLCP DTP Sbjct: 446 FEKTRKVSGPRALQPSQWGMLCPCDTP 472 [7][TOP] >UniRef100_B8BQM2 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BQM2_THAPS Length = 1108 Score = 144 bits (364), Expect = 2e-33 Identities = 66/86 (76%), Positives = 78/86 (90%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186 FDV K IR D+I YG+ SA+SSGNW+++RFRM+R GVTQVLSRLS+I+A+GMMTR+ SQF Sbjct: 367 FDVIKTIRPDSIAYGMMSAISSGNWVLKRFRMDRAGVTQVLSRLSYISALGMMTRVNSQF 426 Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264 EKTRKVSGPR+L PSQWGMLCPADTP Sbjct: 427 EKTRKVSGPRSLQPSQWGMLCPADTP 452 [8][TOP] >UniRef100_B4LKV4 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis RepID=B4LKV4_DROVI Length = 1137 Score = 143 bits (361), Expect = 5e-33 Identities = 68/88 (77%), Positives = 78/88 (88%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S Sbjct: 405 AQFDVVKHMRAAQITVGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492 [9][TOP] >UniRef100_B4J5G6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi RepID=B4J5G6_DROGR Length = 1137 Score = 143 bits (361), Expect = 5e-33 Identities = 68/88 (77%), Positives = 78/88 (88%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S Sbjct: 405 AQFDVVKHMRAAQITVGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492 [10][TOP] >UniRef100_Q28ZV6 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura pseudoobscura RepID=Q28ZV6_DROPS Length = 1137 Score = 143 bits (360), Expect = 7e-33 Identities = 68/88 (77%), Positives = 78/88 (88%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S Sbjct: 405 AQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492 [11][TOP] >UniRef100_B4P5Q3 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba RepID=B4P5Q3_DROYA Length = 1137 Score = 143 bits (360), Expect = 7e-33 Identities = 68/88 (77%), Positives = 78/88 (88%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S Sbjct: 405 AQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492 [12][TOP] >UniRef100_B4KPU7 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis RepID=B4KPU7_DROMO Length = 1136 Score = 143 bits (360), Expect = 7e-33 Identities = 68/88 (77%), Positives = 78/88 (88%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S Sbjct: 405 AQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492 [13][TOP] >UniRef100_B4QC69 DNA-directed RNA polymerase n=2 Tax=melanogaster subgroup RepID=B4QC69_DROSI Length = 1137 Score = 143 bits (360), Expect = 7e-33 Identities = 68/88 (77%), Positives = 78/88 (88%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S Sbjct: 405 AQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492 [14][TOP] >UniRef100_B4GGQ4 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis RepID=B4GGQ4_DROPE Length = 1137 Score = 143 bits (360), Expect = 7e-33 Identities = 68/88 (77%), Positives = 78/88 (88%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S Sbjct: 405 AQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492 [15][TOP] >UniRef100_B3NS93 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta RepID=B3NS93_DROER Length = 1137 Score = 143 bits (360), Expect = 7e-33 Identities = 68/88 (77%), Positives = 78/88 (88%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S Sbjct: 405 AQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492 [16][TOP] >UniRef100_B3MH37 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae RepID=B3MH37_DROAN Length = 1137 Score = 143 bits (360), Expect = 7e-33 Identities = 68/88 (77%), Positives = 78/88 (88%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S Sbjct: 405 AQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492 [17][TOP] >UniRef100_P25167 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Drosophila melanogaster RepID=RPC2_DROME Length = 1137 Score = 143 bits (360), Expect = 7e-33 Identities = 68/88 (77%), Positives = 78/88 (88%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S Sbjct: 405 AQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492 [18][TOP] >UniRef100_UPI00015B53C8 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide B n=1 Tax=Nasonia vitripennis RepID=UPI00015B53C8 Length = 1127 Score = 141 bits (355), Expect = 3e-32 Identities = 66/88 (75%), Positives = 78/88 (88%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFD+ K +R D+IT GL A+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S Sbjct: 393 AQFDIVKHMRHDSITNGLAVAISSGNWTIKRFKMERHGVTQVLSRLSYISALGMMTRVNS 452 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 453 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 480 [19][TOP] >UniRef100_UPI00004DA04E DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA polymerase III subunit C2) (DNA-directed RNA polymerase III subunit B) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (C128). n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00004DA04E Length = 1136 Score = 141 bits (355), Expect = 3e-32 Identities = 65/88 (73%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+SSGNW ++RF+M+R+GVTQVLSRLS+IAA+GMMTR++S Sbjct: 401 AQFDVVKHMRQDQITNGMVNAISSGNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISS 460 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 461 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 488 [20][TOP] >UniRef100_B2GUR3 DNA-directed RNA polymerase n=1 Tax=Xenopus (Silurana) tropicalis RepID=B2GUR3_XENTR Length = 1134 Score = 141 bits (355), Expect = 3e-32 Identities = 65/88 (73%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+SSGNW ++RF+M+R+GVTQVLSRLS+IAA+GMMTR++S Sbjct: 399 AQFDVVKHMRQDQITNGMVNAISSGNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISS 458 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 459 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 486 [21][TOP] >UniRef100_B4MR22 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni RepID=B4MR22_DROWI Length = 999 Score = 141 bits (355), Expect = 3e-32 Identities = 67/88 (76%), Positives = 78/88 (88%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S Sbjct: 267 AQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERGGVTQVLSRLSYISALGMMTRVNS 326 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEK+RKVSGPR+L PSQWGMLCP+DTP Sbjct: 327 QFEKSRKVSGPRSLQPSQWGMLCPSDTP 354 [22][TOP] >UniRef100_UPI000051A146 PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide (RNA polymerase III subunit 2) (RPC2) isoform 1 n=1 Tax=Apis mellifera RepID=UPI000051A146 Length = 1134 Score = 140 bits (354), Expect = 3e-32 Identities = 66/88 (75%), Positives = 77/88 (87%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFD+ K +R D IT GL A+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S Sbjct: 399 AQFDIVKHMRQDQITNGLAFAISSGNWTIKRFKMERHGVTQVLSRLSYISALGMMTRVNS 458 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 459 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 486 [23][TOP] >UniRef100_Q7Q416 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae RepID=Q7Q416_ANOGA Length = 1089 Score = 140 bits (353), Expect = 4e-32 Identities = 66/88 (75%), Positives = 78/88 (88%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R IT GLE+A+S+GNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S Sbjct: 393 AQFDVGKHMREALITAGLETAISTGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 452 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 453 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 480 [24][TOP] >UniRef100_C3YYC3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae RepID=C3YYC3_BRAFL Length = 1137 Score = 140 bits (353), Expect = 4e-32 Identities = 64/88 (72%), Positives = 79/88 (89%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFD+ K +R D IT GL +A+S+GNW ++RF+M+R GVTQVLSRLSFI+A+GMMTR++S Sbjct: 388 AQFDIVKHMRQDQITNGLVNAISTGNWTVKRFKMDRAGVTQVLSRLSFISALGMMTRISS 447 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 448 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 475 [25][TOP] >UniRef100_UPI000180BF5A PREDICTED: similar to polymerase (RNA) III (DNA directed) polypeptide B n=1 Tax=Ciona intestinalis RepID=UPI000180BF5A Length = 1141 Score = 140 bits (352), Expect = 6e-32 Identities = 65/88 (73%), Positives = 78/88 (88%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV + +R D IT L A+SSGNWI++RF+MERKGVTQVL+RLS+I+A+GMMTR+ S Sbjct: 400 AQFDVVRHMRQDLITTSLVIAISSGNWIVKRFKMERKGVTQVLTRLSYISALGMMTRIAS 459 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 460 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 487 [26][TOP] >UniRef100_UPI00017B31AA UPI00017B31AA related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B31AA Length = 1153 Score = 140 bits (352), Expect = 6e-32 Identities = 64/88 (72%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++S Sbjct: 421 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISS 480 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 481 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 508 [27][TOP] >UniRef100_UPI00017B31A9 UPI00017B31A9 related cluster n=1 Tax=Tetraodon nigroviridis RepID=UPI00017B31A9 Length = 1132 Score = 140 bits (352), Expect = 6e-32 Identities = 64/88 (72%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++S Sbjct: 397 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISS 456 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 457 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 484 [28][TOP] >UniRef100_UPI00016E4F57 UPI00016E4F57 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E4F57 Length = 1132 Score = 140 bits (352), Expect = 6e-32 Identities = 64/88 (72%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++S Sbjct: 397 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISS 456 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 457 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 484 [29][TOP] >UniRef100_Q4S7G7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon nigroviridis RepID=Q4S7G7_TETNG Length = 1171 Score = 140 bits (352), Expect = 6e-32 Identities = 64/88 (72%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++S Sbjct: 426 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISS 485 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 486 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 513 [30][TOP] >UniRef100_A2BG99 DNA-directed RNA polymerase n=1 Tax=Danio rerio RepID=A2BG99_DANRE Length = 1130 Score = 140 bits (352), Expect = 6e-32 Identities = 64/88 (72%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++S Sbjct: 395 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISS 454 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 455 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 482 [31][TOP] >UniRef100_B7FVD4 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7FVD4_PHATR Length = 1211 Score = 140 bits (352), Expect = 6e-32 Identities = 63/86 (73%), Positives = 78/86 (90%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186 FDV K IR DTIT G+ +A+++GNW+++RFRM+R GVTQVLSRLS+++A+GMMTR+ SQF Sbjct: 449 FDVVKTIRPDTITNGMINAIATGNWVLKRFRMDRAGVTQVLSRLSYMSALGMMTRINSQF 508 Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264 EKTRKVSGPR+L PSQWGMLCPADTP Sbjct: 509 EKTRKVSGPRSLQPSQWGMLCPADTP 534 [32][TOP] >UniRef100_C0PUS9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Salmo salar RepID=C0PUS9_SALSA Length = 814 Score = 139 bits (351), Expect = 8e-32 Identities = 63/88 (71%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFD+ K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++S Sbjct: 79 AQFDIVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISS 138 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 139 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 166 [33][TOP] >UniRef100_UPI000194E18E PREDICTED: hypothetical protein n=1 Tax=Taeniopygia guttata RepID=UPI000194E18E Length = 1280 Score = 139 bits (349), Expect = 1e-31 Identities = 63/88 (71%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S Sbjct: 545 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 604 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 605 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 632 [34][TOP] >UniRef100_UPI0001560749 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (DNA-directed RNA polymerase III subunit B) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (C128) n=1 Tax=Equus caballus RepID=UPI0001560749 Length = 1133 Score = 139 bits (349), Expect = 1e-31 Identities = 63/88 (71%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S Sbjct: 398 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 457 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485 [35][TOP] >UniRef100_UPI000155CB1A PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide B n=1 Tax=Ornithorhynchus anatinus RepID=UPI000155CB1A Length = 1113 Score = 139 bits (349), Expect = 1e-31 Identities = 63/88 (71%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S Sbjct: 378 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 437 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 438 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 465 [36][TOP] >UniRef100_UPI0000E7F911 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide B n=1 Tax=Gallus gallus RepID=UPI0000E7F911 Length = 1126 Score = 139 bits (349), Expect = 1e-31 Identities = 63/88 (71%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S Sbjct: 391 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 450 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 451 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 478 [37][TOP] >UniRef100_UPI0000E23379 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide B isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E23379 Length = 1133 Score = 139 bits (349), Expect = 1e-31 Identities = 63/88 (71%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S Sbjct: 398 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 457 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485 [38][TOP] >UniRef100_UPI0000503D79 polymerase (RNA) III (DNA directed) polypeptide B n=2 Tax=Rattus norvegicus RepID=UPI0000503D79 Length = 1133 Score = 139 bits (349), Expect = 1e-31 Identities = 63/88 (71%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S Sbjct: 398 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 457 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485 [39][TOP] >UniRef100_UPI00005EAC23 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide B n=1 Tax=Monodelphis domestica RepID=UPI00005EAC23 Length = 1133 Score = 139 bits (349), Expect = 1e-31 Identities = 63/88 (71%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S Sbjct: 398 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 457 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485 [40][TOP] >UniRef100_UPI00005A223E PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide (RNA polymerase III subunit 2) (RPC2) n=1 Tax=Canis lupus familiaris RepID=UPI00005A223E Length = 1133 Score = 139 bits (349), Expect = 1e-31 Identities = 63/88 (71%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S Sbjct: 398 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 457 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485 [41][TOP] >UniRef100_UPI000179EFE0 UPI000179EFE0 related cluster n=1 Tax=Bos taurus RepID=UPI000179EFE0 Length = 796 Score = 139 bits (349), Expect = 1e-31 Identities = 63/88 (71%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S Sbjct: 61 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 120 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 121 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 148 [42][TOP] >UniRef100_UPI0000F339C2 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (DNA-directed RNA polymerase III subunit B) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (C128) n=1 Tax=Bos taurus RepID=UPI0000F339C2 Length = 1133 Score = 139 bits (349), Expect = 1e-31 Identities = 63/88 (71%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S Sbjct: 398 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 457 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485 [43][TOP] >UniRef100_UPI0000ECD29F DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA polymerase III subunit C2) (DNA-directed RNA polymerase III subunit B) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (C128). n=1 Tax=Gallus gallus RepID=UPI0000ECD29F Length = 1132 Score = 139 bits (349), Expect = 1e-31 Identities = 63/88 (71%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S Sbjct: 397 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 456 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 457 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 484 [44][TOP] >UniRef100_B0WCT6 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus RepID=B0WCT6_CULQU Length = 928 Score = 139 bits (349), Expect = 1e-31 Identities = 64/88 (72%), Positives = 78/88 (88%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFD+ K +R I+ GLE+A+S+GNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S Sbjct: 398 AQFDIVKHMRAALISTGLETAISTGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 457 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485 [45][TOP] >UniRef100_Q7Z3R8 DNA-directed RNA polymerase n=2 Tax=Homininae RepID=Q7Z3R8_HUMAN Length = 1133 Score = 139 bits (349), Expect = 1e-31 Identities = 63/88 (71%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S Sbjct: 398 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 457 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485 [46][TOP] >UniRef100_B3KV73 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KV73_HUMAN Length = 1075 Score = 139 bits (349), Expect = 1e-31 Identities = 63/88 (71%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S Sbjct: 340 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 399 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 400 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 427 [47][TOP] >UniRef100_B3KRQ8 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KRQ8_HUMAN Length = 838 Score = 139 bits (349), Expect = 1e-31 Identities = 63/88 (71%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S Sbjct: 103 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 162 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 163 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 190 [48][TOP] >UniRef100_P59470 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Mus musculus RepID=RPC2_MOUSE Length = 1133 Score = 139 bits (349), Expect = 1e-31 Identities = 63/88 (71%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S Sbjct: 398 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 457 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485 [49][TOP] >UniRef100_Q9NW08 DNA-directed RNA polymerase III subunit RPC2 n=2 Tax=Homo sapiens RepID=RPC2_HUMAN Length = 1133 Score = 139 bits (349), Expect = 1e-31 Identities = 63/88 (71%), Positives = 80/88 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S Sbjct: 398 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 457 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485 [50][TOP] >UniRef100_UPI0000E487B4 PREDICTED: similar to Polymerase (RNA) III (DNA directed) polypeptide B n=1 Tax=Strongylocentrotus purpuratus RepID=UPI0000E487B4 Length = 830 Score = 138 bits (347), Expect = 2e-31 Identities = 63/88 (71%), Positives = 78/88 (88%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFD+ K +R D IT GL +A+S+GNW ++RF+MER GVTQVLSRLS+I+ +GMMTR++S Sbjct: 415 AQFDIVKYMRQDQITNGLITAISTGNWSVKRFKMERAGVTQVLSRLSYISCLGMMTRISS 474 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 475 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 502 [51][TOP] >UniRef100_A9V2W9 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis RepID=A9V2W9_MONBE Length = 1097 Score = 138 bits (347), Expect = 2e-31 Identities = 65/88 (73%), Positives = 75/88 (85%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 A FD +R D IT L +A+SSGNWI++RF+MER GVT VLSRLSFIA++GMMTR+TS Sbjct: 379 AAFDATNFMREDIITNSLRNAISSGNWILKRFKMERHGVTSVLSRLSFIASLGMMTRITS 438 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPR+L PSQWGMLCPADTP Sbjct: 439 QFEKTRKVSGPRSLQPSQWGMLCPADTP 466 [52][TOP] >UniRef100_UPI0000D56081 PREDICTED: similar to RNA polymerase III 128kD subunit CG8344-PA n=1 Tax=Tribolium castaneum RepID=UPI0000D56081 Length = 1122 Score = 136 bits (342), Expect = 8e-31 Identities = 65/87 (74%), Positives = 76/87 (87%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 QFDV K +R+D IT L A+S+GNW I+RFRMER GVTQVLSRLS+I+A+GMMTR+ SQ Sbjct: 391 QFDVVKYMRSDLITNCLVYAISTGNWTIKRFRMERLGVTQVLSRLSYISALGMMTRVNSQ 450 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 FEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 451 FEKTRKVSGPRSLQPSQWGMLCPSDTP 477 [53][TOP] >UniRef100_B7Q0E7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis RepID=B7Q0E7_IXOSC Length = 1141 Score = 134 bits (336), Expect = 4e-30 Identities = 62/87 (71%), Positives = 77/87 (88%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 QFDV K +R D IT GL S++S+GNW ++RF+MER GVTQVL+RLS+I+A+GMMTR+ SQ Sbjct: 408 QFDVVKYVRQDLITNGLVSSISTGNWTVKRFKMERIGVTQVLTRLSYISALGMMTRVNSQ 467 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 FEKTRKVSGPR+L PSQ+GMLCP+DTP Sbjct: 468 FEKTRKVSGPRSLQPSQFGMLCPSDTP 494 [54][TOP] >UniRef100_UPI000186CFA7 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide, putative n=1 Tax=Pediculus humanus corporis RepID=UPI000186CFA7 Length = 1137 Score = 133 bits (335), Expect = 5e-30 Identities = 61/88 (69%), Positives = 74/88 (84%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFD+ K +R D IT G +A+S+GNW I+RFRM +GVTQVLSRLS+I+A GMMTR+ S Sbjct: 403 AQFDIVKHLRQDFITNGFSNAISTGNWTIKRFRMHTQGVTQVLSRLSYISAFGMMTRVNS 462 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 FEKTRKVSGPR+LH +QWGMLCP+DTP Sbjct: 463 HFEKTRKVSGPRSLHATQWGMLCPSDTP 490 [55][TOP] >UniRef100_Q54IZ9 Ddi rpc2 intein n=1 Tax=Dictyostelium discoideum RepID=RPC2_DICDI Length = 1608 Score = 133 bits (334), Expect = 7e-30 Identities = 62/85 (72%), Positives = 73/85 (85%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 D+ K IRTDTIT G A+SSG W ++RFRMER GV+QVLSRLS+I+ MGMMTR+ SQFE Sbjct: 417 DLPKLIRTDTITNGFTHAISSGQWNLKRFRMERSGVSQVLSRLSYISCMGMMTRIQSQFE 476 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 KTRKV+GPR+L PSQWGMLCP+DTP Sbjct: 477 KTRKVAGPRSLQPSQWGMLCPSDTP 501 [56][TOP] >UniRef100_Q27492 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis elegans RepID=Q27492_CAEEL Length = 1154 Score = 132 bits (332), Expect = 1e-29 Identities = 62/88 (70%), Positives = 75/88 (85%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 A D+ K +R D IT + +A+S+GNWII+RFRMER GVTQVLSRLS+I+A+GMMTR+ S Sbjct: 411 APLDIVKHMRQDMITNTIVNAMSTGNWIIKRFRMERLGVTQVLSRLSYISALGMMTRINS 470 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 FEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 471 TFEKTRKVSGPRSLQPSQWGMLCPSDTP 498 [57][TOP] >UniRef100_B6VBN7 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis brenneri RepID=B6VBN7_CAEBE Length = 1152 Score = 132 bits (332), Expect = 1e-29 Identities = 62/88 (70%), Positives = 75/88 (85%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 A D+ K +R D IT + +A+S+GNWII+RFRMER GVTQVLSRLS+I+A+GMMTR+ S Sbjct: 410 APLDIVKHMRQDMITNTIVNAMSTGNWIIKRFRMERLGVTQVLSRLSYISALGMMTRINS 469 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 FEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 470 TFEKTRKVSGPRSLQPSQWGMLCPSDTP 497 [58][TOP] >UniRef100_B3S5S8 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens RepID=B3S5S8_TRIAD Length = 1016 Score = 132 bits (332), Expect = 1e-29 Identities = 59/87 (67%), Positives = 76/87 (87%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 +FD+ K +R D IT G AL++GNW I+R++M+R GVTQVLSRLS+++A+GMMTR++SQ Sbjct: 300 EFDIVKYMRQDQITNGFNLALTTGNWSIKRYKMDRAGVTQVLSRLSYLSALGMMTRISSQ 359 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 FEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 360 FEKTRKVSGPRSLQPSQWGMLCPSDTP 386 [59][TOP] >UniRef100_A8WJV6 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae AF16 RepID=A8WJV6_CAEBR Length = 1160 Score = 132 bits (332), Expect = 1e-29 Identities = 62/88 (70%), Positives = 75/88 (85%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 A D+ K +R D IT + +A+S+GNWII+RFRMER GVTQVLSRLS+I+A+GMMTR+ S Sbjct: 396 APLDIVKHMRQDMITNTIVNAMSTGNWIIKRFRMERLGVTQVLSRLSYISALGMMTRINS 455 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 FEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 456 TFEKTRKVSGPRSLQPSQWGMLCPSDTP 483 [60][TOP] >UniRef100_C5Z6F6 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor RepID=C5Z6F6_SORBI Length = 1137 Score = 132 bits (331), Expect = 2e-29 Identities = 61/85 (71%), Positives = 72/85 (84%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 D ++ I DTIT+GLE A+S+GNW I+RFRM RKGV+QVLSRLS++A +G MTR+T QFE Sbjct: 391 DFSQLIMQDTITFGLERAISTGNWDIKRFRMHRKGVSQVLSRLSYMATLGYMTRITPQFE 450 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 KTRK SGPRAL PSQWGMLCP DTP Sbjct: 451 KTRKTSGPRALQPSQWGMLCPCDTP 475 [61][TOP] >UniRef100_C4QD48 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni RepID=C4QD48_SCHMA Length = 1126 Score = 130 bits (328), Expect = 4e-29 Identities = 60/86 (69%), Positives = 75/86 (87%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186 FD+++ I+T IT L A+SSGNWII+RFRM R GVTQV+SRLS++AA+G MTRMTSQF Sbjct: 377 FDISRHIKTWMITEQLNRAISSGNWIIKRFRMMRHGVTQVVSRLSYVAALGHMTRMTSQF 436 Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264 EKTRKVSGPR++H SQWG++CP+DTP Sbjct: 437 EKTRKVSGPRSIHASQWGLICPSDTP 462 [62][TOP] >UniRef100_C4QD47 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni RepID=C4QD47_SCHMA Length = 1128 Score = 130 bits (328), Expect = 4e-29 Identities = 60/86 (69%), Positives = 75/86 (87%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186 FD+++ I+T IT L A+SSGNWII+RFRM R GVTQV+SRLS++AA+G MTRMTSQF Sbjct: 390 FDISRHIKTWMITEQLNRAISSGNWIIKRFRMMRHGVTQVVSRLSYVAALGHMTRMTSQF 449 Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264 EKTRKVSGPR++H SQWG++CP+DTP Sbjct: 450 EKTRKVSGPRSIHASQWGLICPSDTP 475 [63][TOP] >UniRef100_UPI00017918AB PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2 (RNA polymerase III subunit C2) (DNA-directed RNA polymerase III subunit B) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (C128) n=1 Tax=Acyrthosiphon pisum RepID=UPI00017918AB Length = 1112 Score = 130 bits (327), Expect = 5e-29 Identities = 61/86 (70%), Positives = 75/86 (87%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186 FD+ K IRTDTIT L A+ +GNW I+RFRMER GVTQVL+RLS+++A+GMMTR+ SQF Sbjct: 383 FDIIKYIRTDTITNALVFAIQTGNWSIKRFRMERHGVTQVLTRLSYLSAIGMMTRVNSQF 442 Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264 EK+RKVSGPR+L PSQ+GMLCP+DTP Sbjct: 443 EKSRKVSGPRSLQPSQFGMLCPSDTP 468 [64][TOP] >UniRef100_B9Q403 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii VEG RepID=B9Q403_TOXGO Length = 1324 Score = 130 bits (327), Expect = 5e-29 Identities = 61/85 (71%), Positives = 72/85 (84%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 D + + TD IT G+++ALS+GNW I+RFRMER GV+QVLSRLS+IA +GMMTR+ SQFE Sbjct: 573 DCFRNLPTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLGMMTRINSQFE 632 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 K RKVSGPRAL PSQWGMLCP DTP Sbjct: 633 KGRKVSGPRALQPSQWGMLCPCDTP 657 [65][TOP] >UniRef100_B9PFT5 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii GT1 RepID=B9PFT5_TOXGO Length = 1328 Score = 130 bits (327), Expect = 5e-29 Identities = 61/85 (71%), Positives = 72/85 (84%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 D + + TD IT G+++ALS+GNW I+RFRMER GV+QVLSRLS+IA +GMMTR+ SQFE Sbjct: 577 DCFRNLPTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLGMMTRINSQFE 636 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 K RKVSGPRAL PSQWGMLCP DTP Sbjct: 637 KGRKVSGPRALQPSQWGMLCPCDTP 661 [66][TOP] >UniRef100_B6KDI3 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49 RepID=B6KDI3_TOXGO Length = 1332 Score = 130 bits (327), Expect = 5e-29 Identities = 61/85 (71%), Positives = 72/85 (84%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 D + + TD IT G+++ALS+GNW I+RFRMER GV+QVLSRLS+IA +GMMTR+ SQFE Sbjct: 581 DCFRNLPTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLGMMTRINSQFE 640 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 K RKVSGPRAL PSQWGMLCP DTP Sbjct: 641 KGRKVSGPRALQPSQWGMLCPCDTP 665 [67][TOP] >UniRef100_A8P4S3 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide, putative n=1 Tax=Brugia malayi RepID=A8P4S3_BRUMA Length = 1104 Score = 130 bits (327), Expect = 5e-29 Identities = 60/88 (68%), Positives = 73/88 (82%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 A D+ K +R D IT L AL++GNW I+RF+MER+GVTQVLSRLS+I+ +GMMTR+ S Sbjct: 392 APLDIVKHVRQDLITNALVDALATGNWTIKRFKMERQGVTQVLSRLSYISVLGMMTRINS 451 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 FEKTRKVSGPR+L PSQWGMLCP+DTP Sbjct: 452 TFEKTRKVSGPRSLQPSQWGMLCPSDTP 479 [68][TOP] >UniRef100_B9IDF9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa RepID=B9IDF9_POPTR Length = 1141 Score = 128 bits (322), Expect = 2e-28 Identities = 60/88 (68%), Positives = 75/88 (85%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 ++FD ++ I D+IT GLE ALS+GNW ++RFRM RKGVTQVL RLS++A++G MTR++ Sbjct: 395 SRFDFSQYIVRDSITNGLERALSTGNWDVKRFRMNRKGVTQVLVRLSYMASLGHMTRISP 454 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEK+RKVSGPRAL PSQWGMLCP DTP Sbjct: 455 QFEKSRKVSGPRALQPSQWGMLCPCDTP 482 [69][TOP] >UniRef100_Q84R88 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=Q84R88_ORYSJ Length = 1174 Score = 128 bits (321), Expect = 2e-28 Identities = 59/85 (69%), Positives = 73/85 (85%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 D++ I+ + IT+GLE A+S+GNW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFE Sbjct: 428 DLSLHIKENIITHGLERAISTGNWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFE 487 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 KTRK SGPRAL PSQWGMLCP DTP Sbjct: 488 KTRKTSGPRALQPSQWGMLCPCDTP 512 [70][TOP] >UniRef100_Q10JZ3 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=Q10JZ3_ORYSJ Length = 1155 Score = 128 bits (321), Expect = 2e-28 Identities = 59/85 (69%), Positives = 73/85 (85%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 D++ I+ + IT+GLE A+S+GNW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFE Sbjct: 409 DLSLHIKENIITHGLERAISTGNWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFE 468 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 KTRK SGPRAL PSQWGMLCP DTP Sbjct: 469 KTRKTSGPRALQPSQWGMLCPCDTP 493 [71][TOP] >UniRef100_Q10JZ2 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=Q10JZ2_ORYSJ Length = 1039 Score = 128 bits (321), Expect = 2e-28 Identities = 59/85 (69%), Positives = 73/85 (85%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 D++ I+ + IT+GLE A+S+GNW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFE Sbjct: 409 DLSLHIKENIITHGLERAISTGNWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFE 468 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 KTRK SGPRAL PSQWGMLCP DTP Sbjct: 469 KTRKTSGPRALQPSQWGMLCPCDTP 493 [72][TOP] >UniRef100_B3LB54 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H RepID=B3LB54_PLAKH Length = 1401 Score = 127 bits (318), Expect = 5e-28 Identities = 58/85 (68%), Positives = 73/85 (85%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 DV +++ D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFE Sbjct: 625 DVFRSLPKDIITRGMQAAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFE 684 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 K RKVSGPRAL PSQWG+LCP DTP Sbjct: 685 KGRKVSGPRALQPSQWGVLCPCDTP 709 [73][TOP] >UniRef100_A5K0G6 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax RepID=A5K0G6_PLAVI Length = 1427 Score = 127 bits (318), Expect = 5e-28 Identities = 58/85 (68%), Positives = 73/85 (85%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 DV +++ D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFE Sbjct: 622 DVFRSLPKDIITRGMQAAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFE 681 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 K RKVSGPRAL PSQWG+LCP DTP Sbjct: 682 KGRKVSGPRALQPSQWGVLCPCDTP 706 [74][TOP] >UniRef100_B9SHS2 DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9SHS2_RICCO Length = 1139 Score = 126 bits (316), Expect = 9e-28 Identities = 59/88 (67%), Positives = 75/88 (85%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 ++FD+A+ I D IT GLE LS+GN+ ++RF+M RKG+TQVL RLS+IA++GMMTR++ Sbjct: 399 SRFDLAQYIVRDNITNGLERTLSTGNFDVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSP 458 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEK+RKVSGPRAL PSQWGMLCP DTP Sbjct: 459 QFEKSRKVSGPRALQPSQWGMLCPCDTP 486 [75][TOP] >UniRef100_B6AC47 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66 RepID=B6AC47_9CRYT Length = 1219 Score = 126 bits (316), Expect = 9e-28 Identities = 58/85 (68%), Positives = 72/85 (84%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 D + + TD IT G+++ALS+GNW I+RFRMER G+TQVLSR S+I+A+G+MTR+ SQFE Sbjct: 473 DCFRNLPTDIITRGMQTALSTGNWSIKRFRMERSGMTQVLSRYSYISALGIMTRVDSQFE 532 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 K RKVSGPRAL PSQWG+LCP DTP Sbjct: 533 KARKVSGPRALQPSQWGILCPCDTP 557 [76][TOP] >UniRef100_Q0CN89 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624 RepID=Q0CN89_ASPTN Length = 1219 Score = 126 bits (316), Expect = 9e-28 Identities = 59/81 (72%), Positives = 72/81 (88%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 ++ T+ IT G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRK Sbjct: 487 SMHTNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRK 546 Query: 202 VSGPRALHPSQWGMLCPADTP 264 VSGPRAL PSQ+GMLCPADTP Sbjct: 547 VSGPRALQPSQFGMLCPADTP 567 [77][TOP] >UniRef100_Q8I5X9 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7 RepID=Q8I5X9_PLAF7 Length = 1450 Score = 125 bits (315), Expect = 1e-27 Identities = 58/85 (68%), Positives = 72/85 (84%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 DV + + D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFE Sbjct: 646 DVFRNLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFE 705 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 K RKVSGPRAL PSQWG+LCP DTP Sbjct: 706 KGRKVSGPRALQPSQWGVLCPCDTP 730 [78][TOP] >UniRef100_Q7RNH0 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii RepID=Q7RNH0_PLAYO Length = 1323 Score = 125 bits (315), Expect = 1e-27 Identities = 58/85 (68%), Positives = 72/85 (84%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 DV + + D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFE Sbjct: 565 DVFRNLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFE 624 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 K RKVSGPRAL PSQWG+LCP DTP Sbjct: 625 KGRKVSGPRALQPSQWGVLCPCDTP 649 [79][TOP] >UniRef100_Q4YMS1 DNA-directed RNA polymerase III subunit, putative (Fragment) n=1 Tax=Plasmodium berghei RepID=Q4YMS1_PLABE Length = 607 Score = 125 bits (315), Expect = 1e-27 Identities = 58/85 (68%), Positives = 72/85 (84%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 DV + + D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFE Sbjct: 451 DVFRNLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFE 510 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 K RKVSGPRAL PSQWG+LCP DTP Sbjct: 511 KGRKVSGPRALQPSQWGVLCPCDTP 535 [80][TOP] >UniRef100_Q4XDD3 DNA-directed RNA polymerase III subunit, putative (Fragment) n=1 Tax=Plasmodium chabaudi RepID=Q4XDD3_PLACH Length = 432 Score = 125 bits (315), Expect = 1e-27 Identities = 58/85 (68%), Positives = 72/85 (84%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 DV + + D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFE Sbjct: 300 DVFRNLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFE 359 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 K RKVSGPRAL PSQWG+LCP DTP Sbjct: 360 KGRKVSGPRALQPSQWGVLCPCDTP 384 [81][TOP] >UniRef100_Q4PBR7 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis RepID=Q4PBR7_USTMA Length = 1169 Score = 125 bits (315), Expect = 1e-27 Identities = 58/77 (75%), Positives = 68/77 (88%) Frame = +1 Query: 34 DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 213 D IT G A+S+GNW ++RF+MER G+T VLSRLSFIAA+GMMTR++SQFEKTRKVSGP Sbjct: 437 DYITSGFVRAISTGNWSLKRFKMERAGITHVLSRLSFIAALGMMTRISSQFEKTRKVSGP 496 Query: 214 RALHPSQWGMLCPADTP 264 RAL PSQWGMLCP+DTP Sbjct: 497 RALQPSQWGMLCPSDTP 513 [82][TOP] >UniRef100_B0XMI5 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus RepID=B0XMI5_ASPFC Length = 1200 Score = 125 bits (315), Expect = 1e-27 Identities = 61/89 (68%), Positives = 75/89 (84%), Gaps = 2/89 (2%) Frame = +1 Query: 4 QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177 QFD ++ ++ IT G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++ Sbjct: 461 QFDAWTVMSMHSNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRIS 520 Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264 SQFEKTRKVSGPRAL PSQ+GMLCPADTP Sbjct: 521 SQFEKTRKVSGPRALQPSQFGMLCPADTP 549 [83][TOP] >UniRef100_A1D510 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181 RepID=A1D510_NEOFI Length = 1200 Score = 125 bits (315), Expect = 1e-27 Identities = 61/89 (68%), Positives = 75/89 (84%), Gaps = 2/89 (2%) Frame = +1 Query: 4 QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177 QFD ++ ++ IT G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++ Sbjct: 461 QFDAWTVMSMHSNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRIS 520 Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264 SQFEKTRKVSGPRAL PSQ+GMLCPADTP Sbjct: 521 SQFEKTRKVSGPRALQPSQFGMLCPADTP 549 [84][TOP] >UniRef100_Q5CPZ8 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium parvum Iowa II RepID=Q5CPZ8_CRYPV Length = 1287 Score = 125 bits (314), Expect = 1e-27 Identities = 57/85 (67%), Positives = 72/85 (84%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 D + + TD IT G+++ALS+GNW I+RFRMER G+TQVL+R S+IA++G+MTR+ SQFE Sbjct: 531 DCFRNLPTDIITRGMQTALSTGNWSIKRFRMERSGMTQVLTRFSYIASLGIMTRVDSQFE 590 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 K RKVSGPRAL PSQWG+LCP DTP Sbjct: 591 KARKVSGPRALQPSQWGILCPCDTP 615 [85][TOP] >UniRef100_C5JTE0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis SLH14081 RepID=C5JTE0_AJEDS Length = 1204 Score = 125 bits (314), Expect = 1e-27 Identities = 62/89 (69%), Positives = 74/89 (83%), Gaps = 2/89 (2%) Frame = +1 Query: 4 QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177 QFD AI + IT G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++ Sbjct: 464 QFDAYGVVAIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRIS 523 Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264 SQFEKTRKVSGPRAL PSQ+GMLCP+DTP Sbjct: 524 SQFEKTRKVSGPRALQPSQFGMLCPSDTP 552 [86][TOP] >UniRef100_C5GKN6 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3 RepID=C5GKN6_AJEDR Length = 1228 Score = 125 bits (314), Expect = 1e-27 Identities = 62/89 (69%), Positives = 74/89 (83%), Gaps = 2/89 (2%) Frame = +1 Query: 4 QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177 QFD AI + IT G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++ Sbjct: 488 QFDAYGVVAIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRIS 547 Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264 SQFEKTRKVSGPRAL PSQ+GMLCP+DTP Sbjct: 548 SQFEKTRKVSGPRALQPSQFGMLCPSDTP 576 [87][TOP] >UniRef100_C1HBD0 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb01 RepID=C1HBD0_PARBA Length = 1205 Score = 125 bits (314), Expect = 1e-27 Identities = 62/89 (69%), Positives = 74/89 (83%), Gaps = 2/89 (2%) Frame = +1 Query: 4 QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177 QFD AI + IT G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++ Sbjct: 465 QFDAYGVVAIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRIS 524 Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264 SQFEKTRKVSGPRAL PSQ+GMLCP+DTP Sbjct: 525 SQFEKTRKVSGPRALQPSQFGMLCPSDTP 553 [88][TOP] >UniRef100_C1GLZ2 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb18 RepID=C1GLZ2_PARBD Length = 1209 Score = 125 bits (314), Expect = 1e-27 Identities = 62/89 (69%), Positives = 74/89 (83%), Gaps = 2/89 (2%) Frame = +1 Query: 4 QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177 QFD AI + IT G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++ Sbjct: 507 QFDAYGVVAIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRIS 566 Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264 SQFEKTRKVSGPRAL PSQ+GMLCP+DTP Sbjct: 567 SQFEKTRKVSGPRALQPSQFGMLCPSDTP 595 [89][TOP] >UniRef100_C0SI08 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis Pb03 RepID=C0SI08_PARBP Length = 1232 Score = 125 bits (314), Expect = 1e-27 Identities = 62/89 (69%), Positives = 74/89 (83%), Gaps = 2/89 (2%) Frame = +1 Query: 4 QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177 QFD AI + IT G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++ Sbjct: 507 QFDAYGVVAIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRIS 566 Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264 SQFEKTRKVSGPRAL PSQ+GMLCP+DTP Sbjct: 567 SQFEKTRKVSGPRALQPSQFGMLCPSDTP 595 [90][TOP] >UniRef100_C0P0A1 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR RepID=C0P0A1_AJECG Length = 1227 Score = 125 bits (314), Expect = 1e-27 Identities = 62/89 (69%), Positives = 74/89 (83%), Gaps = 2/89 (2%) Frame = +1 Query: 4 QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177 QFD AI + IT G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++ Sbjct: 487 QFDAYGVVAIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRIS 546 Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264 SQFEKTRKVSGPRAL PSQ+GMLCP+DTP Sbjct: 547 SQFEKTRKVSGPRALQPSQFGMLCPSDTP 575 [91][TOP] >UniRef100_A6R9I0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1 RepID=A6R9I0_AJECN Length = 1186 Score = 125 bits (314), Expect = 1e-27 Identities = 62/89 (69%), Positives = 74/89 (83%), Gaps = 2/89 (2%) Frame = +1 Query: 4 QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177 QFD AI + IT G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++ Sbjct: 455 QFDAYGVVAIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRIS 514 Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264 SQFEKTRKVSGPRAL PSQ+GMLCP+DTP Sbjct: 515 SQFEKTRKVSGPRALQPSQFGMLCPSDTP 543 [92][TOP] >UniRef100_B8MJE1 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC 10500 RepID=B8MJE1_TALSN Length = 1212 Score = 125 bits (313), Expect = 2e-27 Identities = 58/81 (71%), Positives = 72/81 (88%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 A+ + IT+G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRK Sbjct: 479 ALHGNHITHGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRK 538 Query: 202 VSGPRALHPSQWGMLCPADTP 264 VSGPRAL PSQ+GMLCP+DTP Sbjct: 539 VSGPRALQPSQFGMLCPSDTP 559 [93][TOP] >UniRef100_C4M3E3 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4M3E3_ENTHI Length = 1122 Score = 124 bits (312), Expect = 3e-27 Identities = 56/86 (65%), Positives = 71/86 (82%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186 FD+ K I IT GL +LS+GNW+++RF M+R G+TQVLSRLS+I+A+GMMTR+ S F Sbjct: 395 FDIIKCISPHRITQGLIHSLSTGNWVLKRFNMDRAGITQVLSRLSYISALGMMTRLNSHF 454 Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264 EKTRKVSGPR+L SQWGM+CP+DTP Sbjct: 455 EKTRKVSGPRSLQGSQWGMVCPSDTP 480 [94][TOP] >UniRef100_B0EDI3 DNA-directed RNA polymerase n=1 Tax=Entamoeba dispar SAW760 RepID=B0EDI3_ENTDI Length = 1115 Score = 124 bits (312), Expect = 3e-27 Identities = 56/86 (65%), Positives = 71/86 (82%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186 FD+ K I IT GL +LS+GNW+++RF M+R G+TQVLSRLS+I+A+GMMTR+ S F Sbjct: 414 FDIIKCISPHRITQGLIHSLSTGNWVLKRFNMDRAGITQVLSRLSYISALGMMTRLNSHF 473 Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264 EKTRKVSGPR+L SQWGM+CP+DTP Sbjct: 474 EKTRKVSGPRSLQGSQWGMVCPSDTP 499 [95][TOP] >UniRef100_C4JMP0 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704 RepID=C4JMP0_UNCRE Length = 1202 Score = 124 bits (312), Expect = 3e-27 Identities = 59/81 (72%), Positives = 71/81 (87%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI + IT G+ A+S+GNW ++RFRMER GVT VLSRLS+I+A+GMMTR++SQFEKTRK Sbjct: 470 AIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYISALGMMTRISSQFEKTRK 529 Query: 202 VSGPRALHPSQWGMLCPADTP 264 VSGPRAL PSQ+GMLCPADTP Sbjct: 530 VSGPRALQPSQFGMLCPADTP 550 [96][TOP] >UniRef100_C6HGH3 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus H143 RepID=C6HGH3_AJECH Length = 1227 Score = 124 bits (311), Expect = 3e-27 Identities = 61/89 (68%), Positives = 74/89 (83%), Gaps = 2/89 (2%) Frame = +1 Query: 4 QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177 QFD AI + IT G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GM+TR++ Sbjct: 487 QFDAYGVVAIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMLTRIS 546 Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264 SQFEKTRKVSGPRAL PSQ+GMLCP+DTP Sbjct: 547 SQFEKTRKVSGPRALQPSQFGMLCPSDTP 575 [97][TOP] >UniRef100_A2Q8V9 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88 RepID=A2Q8V9_ASPNC Length = 1225 Score = 124 bits (311), Expect = 3e-27 Identities = 58/80 (72%), Positives = 71/80 (88%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 + ++ IT G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKV Sbjct: 494 MHSNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKV 553 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GMLCPADTP Sbjct: 554 SGPRALQPSQFGMLCPADTP 573 [98][TOP] >UniRef100_B6QHR9 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC 18224 RepID=B6QHR9_PENMQ Length = 1212 Score = 124 bits (310), Expect = 4e-27 Identities = 57/75 (76%), Positives = 69/75 (92%) Frame = +1 Query: 40 ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRA 219 IT+G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPRA Sbjct: 485 ITHGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRA 544 Query: 220 LHPSQWGMLCPADTP 264 L PSQ+GMLCP+DTP Sbjct: 545 LQPSQFGMLCPSDTP 559 [99][TOP] >UniRef100_B6HTA4 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum Wisconsin 54-1255 RepID=B6HTA4_PENCW Length = 1208 Score = 124 bits (310), Expect = 4e-27 Identities = 58/75 (77%), Positives = 68/75 (90%) Frame = +1 Query: 40 ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRA 219 IT G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPRA Sbjct: 483 ITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRA 542 Query: 220 LHPSQWGMLCPADTP 264 L PSQ+GMLCPADTP Sbjct: 543 LQPSQFGMLCPADTP 557 [100][TOP] >UniRef100_A8PVW9 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966 RepID=A8PVW9_MALGO Length = 1131 Score = 124 bits (310), Expect = 4e-27 Identities = 57/77 (74%), Positives = 68/77 (88%) Frame = +1 Query: 34 DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 213 D IT G A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGP Sbjct: 409 DYITAGFVRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGP 468 Query: 214 RALHPSQWGMLCPADTP 264 RAL PSQWGMLCP+DTP Sbjct: 469 RALQPSQWGMLCPSDTP 485 [101][TOP] >UniRef100_A1CS37 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus RepID=A1CS37_ASPCL Length = 1246 Score = 124 bits (310), Expect = 4e-27 Identities = 58/75 (77%), Positives = 68/75 (90%) Frame = +1 Query: 40 ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRA 219 IT G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPRA Sbjct: 521 ITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRA 580 Query: 220 LHPSQWGMLCPADTP 264 L PSQ+GMLCPADTP Sbjct: 581 LQPSQFGMLCPADTP 595 [102][TOP] >UniRef100_C5K7V0 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5K7V0_9ALVE Length = 1159 Score = 123 bits (309), Expect = 6e-27 Identities = 57/85 (67%), Positives = 72/85 (84%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 DV + I ++ IT G+ A+SSGNW I+RFR++R GV+QVLSR SFIAA+G MTR+ SQFE Sbjct: 417 DVLRDIDSERITRGMNRAISSGNWNIKRFRIDRSGVSQVLSRFSFIAALGAMTRVKSQFE 476 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 K+RK++GPRAL PSQWGMLCP+DTP Sbjct: 477 KSRKLAGPRALQPSQWGMLCPSDTP 501 [103][TOP] >UniRef100_Q1DTS7 DNA-directed RNA polymerase n=2 Tax=Coccidioides RepID=Q1DTS7_COCIM Length = 1233 Score = 123 bits (309), Expect = 6e-27 Identities = 58/81 (71%), Positives = 71/81 (87%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI + IT G+ A+S+GNW ++RFRMER GVT VLSRLS+I+A+GMMTR++SQFEKTRK Sbjct: 501 AIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYISALGMMTRISSQFEKTRK 560 Query: 202 VSGPRALHPSQWGMLCPADTP 264 VSGPRAL PSQ+GMLCP+DTP Sbjct: 561 VSGPRALQPSQFGMLCPSDTP 581 [104][TOP] >UniRef100_A7QMF0 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7QMF0_VITVI Length = 1146 Score = 123 bits (308), Expect = 7e-27 Identities = 55/88 (62%), Positives = 74/88 (84%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 ++FD ++ I D+IT GLE LS+GNW ++RFRM RKG++QV++RLS+I ++G MT+++ Sbjct: 391 SRFDFSQFIVRDSITVGLERTLSTGNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISP 450 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEK+RKVSGPRAL PSQWGMLCP DTP Sbjct: 451 QFEKSRKVSGPRALQPSQWGMLCPCDTP 478 [105][TOP] >UniRef100_Q5KC33 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans RepID=Q5KC33_CRYNE Length = 1129 Score = 123 bits (308), Expect = 7e-27 Identities = 60/88 (68%), Positives = 70/88 (79%), Gaps = 2/88 (2%) Frame = +1 Query: 7 FDVAKAIRT--DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 FD IR D IT ++S+GNW ++RF +ER GVT VLSRLSFIAA+GMMTR++S Sbjct: 404 FDAGTLIRQGGDPITQAFVRSISTGNWSLKRFHVERAGVTHVLSRLSFIAALGMMTRISS 463 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 QFEKTRKVSGPRAL PSQWGMLCP+DTP Sbjct: 464 QFEKTRKVSGPRALQPSQWGMLCPSDTP 491 [106][TOP] >UniRef100_Q2GW04 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum RepID=Q2GW04_CHAGB Length = 1155 Score = 123 bits (308), Expect = 7e-27 Identities = 57/75 (76%), Positives = 65/75 (86%) Frame = +1 Query: 40 ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRA 219 IT GL A+ SGNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPRA Sbjct: 428 ITQGLNRAIQSGNWNVKRFNMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRA 487 Query: 220 LHPSQWGMLCPADTP 264 L PSQWGMLCP+DTP Sbjct: 488 LQPSQWGMLCPSDTP 502 [107][TOP] >UniRef100_B0D7Q0 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82 RepID=B0D7Q0_LACBS Length = 1142 Score = 123 bits (308), Expect = 7e-27 Identities = 58/90 (64%), Positives = 74/90 (82%), Gaps = 2/90 (2%) Frame = +1 Query: 1 AQFDVAKAIRT--DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRM 174 ++FD ++ D +T G A+S+GNW ++RF+MER GVT VLSRLSFI+A+GMMTR+ Sbjct: 409 SEFDAYNTMQMQGDHLTSGFVRAISTGNWSLKRFKMERAGVTHVLSRLSFISALGMMTRI 468 Query: 175 TSQFEKTRKVSGPRALHPSQWGMLCPADTP 264 +SQFEKTRKVSGPRAL PSQWG+LCP+DTP Sbjct: 469 SSQFEKTRKVSGPRALQPSQWGVLCPSDTP 498 [108][TOP] >UniRef100_A8NJT3 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea okayama7#130 RepID=A8NJT3_COPC7 Length = 1140 Score = 123 bits (308), Expect = 7e-27 Identities = 58/90 (64%), Positives = 74/90 (82%), Gaps = 2/90 (2%) Frame = +1 Query: 1 AQFDVAKAIRT--DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRM 174 ++FD ++ D +T G A+S+GNW ++RF+MER GVT VLSRLSFI+A+GMMTR+ Sbjct: 407 SEFDAFNTMQMQGDHLTSGFVRAISTGNWSLKRFKMERAGVTHVLSRLSFISALGMMTRI 466 Query: 175 TSQFEKTRKVSGPRALHPSQWGMLCPADTP 264 +SQFEKTRKVSGPRAL PSQWG+LCP+DTP Sbjct: 467 SSQFEKTRKVSGPRALQPSQWGVLCPSDTP 496 [109][TOP] >UniRef100_UPI0001985A70 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001985A70 Length = 1142 Score = 120 bits (302), Expect = 4e-26 Identities = 55/91 (60%), Positives = 75/91 (82%), Gaps = 3/91 (3%) Frame = +1 Query: 1 AQFDVAKAIR---TDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTR 171 ++FD ++ +R D+IT GLE LS+GNW ++RFRM RKG++QV++RLS+I ++G MT+ Sbjct: 396 SRFDFSQCLRFIVRDSITVGLERTLSTGNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTK 455 Query: 172 MTSQFEKTRKVSGPRALHPSQWGMLCPADTP 264 ++ QFEK+RKVSGPRAL PSQWGMLCP DTP Sbjct: 456 ISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 486 [110][TOP] >UniRef100_Q2URF4 DNA-directed RNA polymerase n=1 Tax=Aspergillus oryzae RepID=Q2URF4_ASPOR Length = 1180 Score = 120 bits (302), Expect = 4e-26 Identities = 57/81 (70%), Positives = 71/81 (87%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 ++ ++ IT G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRK Sbjct: 448 SMHSNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRK 507 Query: 202 VSGPRALHPSQWGMLCPADTP 264 VSGPRAL PSQ+GMLC ADTP Sbjct: 508 VSGPRALQPSQFGMLCLADTP 528 [111][TOP] >UniRef100_B8MYG2 DNA-directed RNA polymerase n=1 Tax=Aspergillus flavus NRRL3357 RepID=B8MYG2_ASPFN Length = 1218 Score = 120 bits (302), Expect = 4e-26 Identities = 57/81 (70%), Positives = 71/81 (87%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 ++ ++ IT G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRK Sbjct: 486 SMHSNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRK 545 Query: 202 VSGPRALHPSQWGMLCPADTP 264 VSGPRAL PSQ+GMLC ADTP Sbjct: 546 VSGPRALQPSQFGMLCLADTP 566 [112][TOP] >UniRef100_C5FVS4 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480 RepID=C5FVS4_NANOT Length = 1211 Score = 120 bits (301), Expect = 5e-26 Identities = 57/81 (70%), Positives = 70/81 (86%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI + IT G+ A+++GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRK Sbjct: 479 AIHGNHITQGMNRAIATGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRK 538 Query: 202 VSGPRALHPSQWGMLCPADTP 264 VSGPRAL PSQ+GMLC +DTP Sbjct: 539 VSGPRALQPSQFGMLCTSDTP 559 [113][TOP] >UniRef100_B6JW67 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JW67_SCHJY Length = 1160 Score = 120 bits (301), Expect = 5e-26 Identities = 57/77 (74%), Positives = 68/77 (88%) Frame = +1 Query: 34 DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 213 D IT G+ ALS+GNW ++RF+MER GVT VLSRLSFI+A+GMMTR+TSQFEKTRKVSGP Sbjct: 433 DHITQGMVRALSTGNWSLKRFKMERAGVTHVLSRLSFISALGMMTRITSQFEKTRKVSGP 492 Query: 214 RALHPSQWGMLCPADTP 264 R+L PSQ+GMLC +DTP Sbjct: 493 RSLQPSQFGMLCTSDTP 509 [114][TOP] >UniRef100_UPI00003BE866 hypothetical protein DEHA0G24574g n=1 Tax=Debaryomyces hansenii CBS767 RepID=UPI00003BE866 Length = 1165 Score = 120 bits (300), Expect = 6e-26 Identities = 56/80 (70%), Positives = 70/80 (87%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 I ++ IT GL A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV Sbjct: 429 IHSNNITMGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 488 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GMLC ADTP Sbjct: 489 SGPRALQPSQFGMLCTADTP 508 [115][TOP] >UniRef100_Q9P6E7 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa RepID=Q9P6E7_NEUCR Length = 1155 Score = 120 bits (300), Expect = 6e-26 Identities = 54/75 (72%), Positives = 65/75 (86%) Frame = +1 Query: 40 ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRA 219 I++GL A+ SGNW ++RF M R G+T VLSRLS+IAA+GMMTR++SQFEKTRKVSGPRA Sbjct: 428 ISHGLNRAIQSGNWTVKRFNMNRAGITHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRA 487 Query: 220 LHPSQWGMLCPADTP 264 L PSQWGMLC +DTP Sbjct: 488 LQPSQWGMLCTSDTP 502 [116][TOP] >UniRef100_Q59M52 DNA-directed RNA polymerase n=1 Tax=Candida albicans RepID=Q59M52_CANAL Length = 1157 Score = 120 bits (300), Expect = 6e-26 Identities = 56/80 (70%), Positives = 70/80 (87%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 I ++ IT GL A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV Sbjct: 426 IHSNNITMGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 485 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GMLC ADTP Sbjct: 486 SGPRALQPSQFGMLCTADTP 505 [117][TOP] >UniRef100_C5M3E6 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404 RepID=C5M3E6_CANTT Length = 1159 Score = 120 bits (300), Expect = 6e-26 Identities = 56/80 (70%), Positives = 70/80 (87%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 I ++ IT GL A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV Sbjct: 427 IHSNNITMGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 486 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GMLC ADTP Sbjct: 487 SGPRALQPSQFGMLCTADTP 506 [118][TOP] >UniRef100_B9WLY1 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36 RepID=B9WLY1_CANDC Length = 1157 Score = 120 bits (300), Expect = 6e-26 Identities = 56/80 (70%), Positives = 70/80 (87%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 I ++ IT GL A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV Sbjct: 426 IHSNNITMGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 485 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GMLC ADTP Sbjct: 486 SGPRALQPSQFGMLCTADTP 505 [119][TOP] >UniRef100_B5RUZ7 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii RepID=B5RUZ7_DEBHA Length = 1165 Score = 120 bits (300), Expect = 6e-26 Identities = 56/80 (70%), Positives = 70/80 (87%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 I ++ IT GL A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV Sbjct: 429 IHSNNITMGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 488 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GMLC ADTP Sbjct: 489 SGPRALQPSQFGMLCTADTP 508 [120][TOP] >UniRef100_B2B0Z1 DNA-directed RNA polymerase n=1 Tax=Podospora anserina RepID=B2B0Z1_PODAN Length = 1160 Score = 120 bits (300), Expect = 6e-26 Identities = 56/75 (74%), Positives = 64/75 (85%) Frame = +1 Query: 40 ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRA 219 IT GL A+ SGNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPRA Sbjct: 433 ITQGLNRAIQSGNWTVKRFGMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRA 492 Query: 220 LHPSQWGMLCPADTP 264 L PSQWGMLC +DTP Sbjct: 493 LQPSQWGMLCTSDTP 507 [121][TOP] >UniRef100_A5E0Z1 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus RepID=A5E0Z1_LODEL Length = 1157 Score = 120 bits (300), Expect = 6e-26 Identities = 56/80 (70%), Positives = 70/80 (87%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 I ++ IT GL A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV Sbjct: 425 IHSNNITMGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 484 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GMLC ADTP Sbjct: 485 SGPRALQPSQFGMLCTADTP 504 [122][TOP] >UniRef100_A4R1B6 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea RepID=A4R1B6_MAGGR Length = 1158 Score = 120 bits (300), Expect = 6e-26 Identities = 55/75 (73%), Positives = 65/75 (86%) Frame = +1 Query: 40 ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRA 219 IT G+ A+SSGNW ++RF M R GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPRA Sbjct: 430 ITAGMNRAISSGNWTVKRFNMNRAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPRA 489 Query: 220 LHPSQWGMLCPADTP 264 L PSQWGMLC +DTP Sbjct: 490 LQPSQWGMLCTSDTP 504 [123][TOP] >UniRef100_C8VU19 DNA-directed RNA polymerase III, beta subunit, putative (AFU_orthologue; AFUA_1G02460) n=2 Tax=Emericella nidulans RepID=C8VU19_EMENI Length = 1225 Score = 119 bits (299), Expect = 8e-26 Identities = 56/80 (70%), Positives = 70/80 (87%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 + ++ IT G+ A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKV Sbjct: 494 MHSNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKV 553 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GM+C ADTP Sbjct: 554 SGPRALQPSQFGMICLADTP 573 [124][TOP] >UniRef100_Q6FLJ9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata RepID=Q6FLJ9_CANGA Length = 1133 Score = 119 bits (298), Expect = 1e-25 Identities = 55/80 (68%), Positives = 70/80 (87%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 + ++ IT GL A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV Sbjct: 412 VHSNNITSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 471 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GMLC ADTP Sbjct: 472 SGPRALQPSQFGMLCTADTP 491 [125][TOP] >UniRef100_C5DY85 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS 732 RepID=C5DY85_ZYGRC Length = 1143 Score = 119 bits (298), Expect = 1e-25 Identities = 55/80 (68%), Positives = 70/80 (87%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 + ++ IT GL A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV Sbjct: 421 VHSNNITSGLSRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 480 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GMLC ADTP Sbjct: 481 SGPRALQPSQFGMLCTADTP 500 [126][TOP] >UniRef100_A7TQC8 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM 70294 RepID=A7TQC8_VANPO Length = 1139 Score = 119 bits (298), Expect = 1e-25 Identities = 55/80 (68%), Positives = 70/80 (87%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 + ++ IT GL A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV Sbjct: 417 VHSNNITSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 476 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GMLC ADTP Sbjct: 477 SGPRALQPSQFGMLCTADTP 496 [127][TOP] >UniRef100_P22276 DNA-directed RNA polymerase III subunit RPC2 n=5 Tax=Saccharomyces cerevisiae RepID=RPC2_YEAST Length = 1149 Score = 119 bits (298), Expect = 1e-25 Identities = 55/80 (68%), Positives = 70/80 (87%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 + ++ IT GL A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV Sbjct: 424 VHSNNITSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 483 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GMLC ADTP Sbjct: 484 SGPRALQPSQFGMLCTADTP 503 [128][TOP] >UniRef100_UPI000023E0C8 hypothetical protein FG00843.1 n=1 Tax=Gibberella zeae PH-1 RepID=UPI000023E0C8 Length = 1157 Score = 119 bits (297), Expect = 1e-25 Identities = 54/77 (70%), Positives = 65/77 (84%) Frame = +1 Query: 34 DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 213 + I YG+ A+ +GNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGP Sbjct: 425 NNIGYGINRAIQTGNWNVKRFNMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGP 484 Query: 214 RALHPSQWGMLCPADTP 264 RAL PSQWGMLC +DTP Sbjct: 485 RALQPSQWGMLCTSDTP 501 [129][TOP] >UniRef100_Q0V2J8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum RepID=Q0V2J8_PHANO Length = 1443 Score = 119 bits (297), Expect = 1e-25 Identities = 54/81 (66%), Positives = 71/81 (87%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 ++ + IT G+E A+++GNW ++RF+M+R GVT VLSRLS+IAA+GMMTR++SQFEKTRK Sbjct: 723 SVHKNHITMGIERAIATGNWSLKRFKMDRAGVTHVLSRLSYIAALGMMTRISSQFEKTRK 782 Query: 202 VSGPRALHPSQWGMLCPADTP 264 VSGPRAL PSQ+GMLC +DTP Sbjct: 783 VSGPRALQPSQFGMLCTSDTP 803 [130][TOP] >UniRef100_A3LP81 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis RepID=A3LP81_PICST Length = 1155 Score = 119 bits (297), Expect = 1e-25 Identities = 55/80 (68%), Positives = 70/80 (87%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 I ++ IT GL A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV Sbjct: 426 IHSNNITMGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 485 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GMLC +DTP Sbjct: 486 SGPRALQPSQFGMLCTSDTP 505 [131][TOP] >UniRef100_C9SKJ8 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SKJ8_9PEZI Length = 1105 Score = 118 bits (296), Expect = 2e-25 Identities = 53/77 (68%), Positives = 65/77 (84%) Frame = +1 Query: 34 DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 213 + I G+ A+ +GNW ++RF M R GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGP Sbjct: 426 NNIGQGINRAIQTGNWTVKRFNMNRAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGP 485 Query: 214 RALHPSQWGMLCPADTP 264 RAL PSQWGMLCP+DTP Sbjct: 486 RALQPSQWGMLCPSDTP 502 [132][TOP] >UniRef100_B7XI25 DNA-directed RNA polymerase n=1 Tax=Enterocytozoon bieneusi H348 RepID=B7XI25_ENTBH Length = 1107 Score = 118 bits (296), Expect = 2e-25 Identities = 53/80 (66%), Positives = 66/80 (82%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 ++T +IT L A+SSGNW ++RF+MER GVT VL+R S+I A+GMMT++ S FEKTRKV Sbjct: 389 LQTGSITTTLSRAISSGNWNLKRFKMERSGVTHVLTRYSYITALGMMTKINSHFEKTRKV 448 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPR+LHPS WGM CPADTP Sbjct: 449 SGPRSLHPSSWGMFCPADTP 468 [133][TOP] >UniRef100_B2W234 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2W234_PYRTR Length = 1167 Score = 118 bits (296), Expect = 2e-25 Identities = 54/81 (66%), Positives = 71/81 (87%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 ++ + IT G+E A+++GNW ++RF+M+R GVT VLSRLS+IAA+GMMTR++SQFEKTRK Sbjct: 487 SVHKNHITMGVERAIATGNWSLKRFKMDRAGVTHVLSRLSYIAALGMMTRISSQFEKTRK 546 Query: 202 VSGPRALHPSQWGMLCPADTP 264 VSGPRAL PSQ+GMLC +DTP Sbjct: 547 VSGPRALQPSQFGMLCTSDTP 567 [134][TOP] >UniRef100_UPI000151B156 DNA-directed RNA polymerase III 130 kDa polypeptide n=1 Tax=Pichia guilliermondii ATCC 6260 RepID=UPI000151B156 Length = 1156 Score = 118 bits (295), Expect = 2e-25 Identities = 54/80 (67%), Positives = 70/80 (87%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 I ++ IT G+ A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV Sbjct: 424 IHSNNITMGMNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 483 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GMLC +DTP Sbjct: 484 SGPRALQPSQFGMLCTSDTP 503 [135][TOP] >UniRef100_Q75B52 DNA-directed RNA polymerase n=1 Tax=Eremothecium gossypii RepID=Q75B52_ASHGO Length = 1141 Score = 118 bits (295), Expect = 2e-25 Identities = 54/80 (67%), Positives = 70/80 (87%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 + ++ IT GL A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV Sbjct: 419 VHSNNITSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 478 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GMLC +DTP Sbjct: 479 SGPRALQPSQFGMLCTSDTP 498 [136][TOP] >UniRef100_C7YHY2 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4 RepID=C7YHY2_NECH7 Length = 1156 Score = 118 bits (295), Expect = 2e-25 Identities = 54/77 (70%), Positives = 65/77 (84%) Frame = +1 Query: 34 DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 213 +TI G+ A+ +GNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGP Sbjct: 425 NTIGIGINRAIQTGNWSVKRFNMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGP 484 Query: 214 RALHPSQWGMLCPADTP 264 RAL PSQWGMLC +DTP Sbjct: 485 RALQPSQWGMLCTSDTP 501 [137][TOP] >UniRef100_C4Y486 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC 42720 RepID=C4Y486_CLAL4 Length = 1159 Score = 118 bits (295), Expect = 2e-25 Identities = 54/80 (67%), Positives = 70/80 (87%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 I ++ IT G+ A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV Sbjct: 426 IHSNNITMGMNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 485 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GMLC +DTP Sbjct: 486 SGPRALQPSQFGMLCTSDTP 505 [138][TOP] >UniRef100_A5DLE5 DNA-directed RNA polymerase n=1 Tax=Pichia guilliermondii RepID=A5DLE5_PICGU Length = 1156 Score = 118 bits (295), Expect = 2e-25 Identities = 54/80 (67%), Positives = 70/80 (87%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 I ++ IT G+ A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV Sbjct: 424 IHSNNITMGMNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 483 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GMLC +DTP Sbjct: 484 SGPRALQPSQFGMLCTSDTP 503 [139][TOP] >UniRef100_Q4MYU5 DNA-directed RNA polymerase n=1 Tax=Theileria parva RepID=Q4MYU5_THEPA Length = 1244 Score = 117 bits (294), Expect = 3e-25 Identities = 54/85 (63%), Positives = 72/85 (84%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 D+ + TD IT G+++A+++GNW I+RFRME+ GV+QVLSRLS+I+++GMMT+ SQFE Sbjct: 488 DIFGLMPTDIITNGMQNAIATGNWNIKRFRMEKSGVSQVLSRLSYISSIGMMTKTDSQFE 547 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 K RKVSGPRAL PSQ+G+LCP DTP Sbjct: 548 KGRKVSGPRALQPSQFGILCPCDTP 572 [140][TOP] >UniRef100_C4R793 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115 RepID=C4R793_PICPG Length = 1158 Score = 117 bits (294), Expect = 3e-25 Identities = 56/90 (62%), Positives = 75/90 (83%), Gaps = 2/90 (2%) Frame = +1 Query: 1 AQFDVAKAIR--TDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRM 174 ++FD +I ++ IT G+ A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR+ Sbjct: 420 SEFDALLSINVHSNNITTGINRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRI 479 Query: 175 TSQFEKTRKVSGPRALHPSQWGMLCPADTP 264 +SQFEK+RKVSGPRAL PSQ+GMLC +DTP Sbjct: 480 SSQFEKSRKVSGPRALQPSQFGMLCTSDTP 509 [141][TOP] >UniRef100_Q10233 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Schizosaccharomyces pombe RepID=RPC2_SCHPO Length = 1165 Score = 117 bits (294), Expect = 3e-25 Identities = 55/80 (68%), Positives = 69/80 (86%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 + +D IT G+ ALS+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR+TSQFEKTRKV Sbjct: 435 VHSDHITQGMVRALSTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRITSQFEKTRKV 494 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPR+L SQ+GMLC +DTP Sbjct: 495 SGPRSLQASQFGMLCTSDTP 514 [142][TOP] >UniRef100_Q4UB41 DNA-directed RNA polymerase n=1 Tax=Theileria annulata RepID=Q4UB41_THEAN Length = 1244 Score = 117 bits (293), Expect = 4e-25 Identities = 54/85 (63%), Positives = 72/85 (84%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 D+ + TD IT G+++A+++GNW I+RFRME+ GV+QVLSRLS+I+++GMMT+ SQFE Sbjct: 487 DIFGLMPTDIITNGMQNAIATGNWNIKRFRMEKTGVSQVLSRLSYISSIGMMTKTDSQFE 546 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 K RKVSGPRAL PSQ+G+LCP DTP Sbjct: 547 KGRKVSGPRALQPSQFGILCPCDTP 571 [143][TOP] >UniRef100_Q6CLR1 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis RepID=Q6CLR1_KLULA Length = 1142 Score = 117 bits (293), Expect = 4e-25 Identities = 53/80 (66%), Positives = 70/80 (87%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 + ++ IT G+ A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV Sbjct: 420 VHSNNITTGMNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 479 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GMLC +DTP Sbjct: 480 SGPRALQPSQFGMLCTSDTP 499 [144][TOP] >UniRef100_A7EEL3 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980 UF-70 RepID=A7EEL3_SCLS1 Length = 1230 Score = 117 bits (293), Expect = 4e-25 Identities = 54/75 (72%), Positives = 67/75 (89%) Frame = +1 Query: 40 ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRA 219 IT G+ A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPRA Sbjct: 503 ITIGMNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPRA 562 Query: 220 LHPSQWGMLCPADTP 264 L PSQ+GMLC +DTP Sbjct: 563 LQPSQFGMLCTSDTP 577 [145][TOP] >UniRef100_UPI00005DC295 NRPC2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside binding n=1 Tax=Arabidopsis thaliana RepID=UPI00005DC295 Length = 1161 Score = 117 bits (292), Expect = 5e-25 Identities = 55/91 (60%), Positives = 74/91 (81%), Gaps = 3/91 (3%) Frame = +1 Query: 1 AQFDVAKAIRTDT---ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTR 171 ++FD ++ + D+ I+ GLE LS+GN+ I+RFRM RKG+TQVL+RLSFI +MG +T+ Sbjct: 406 SRFDFSQCLNKDSRYSISLGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITK 465 Query: 172 MTSQFEKTRKVSGPRALHPSQWGMLCPADTP 264 ++ QFEK+RKVSGPR+L PSQWGMLCP DTP Sbjct: 466 ISPQFEKSRKVSGPRSLQPSQWGMLCPCDTP 496 [146][TOP] >UniRef100_Q9FKF1 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana RepID=Q9FKF1_ARATH Length = 1194 Score = 117 bits (292), Expect = 5e-25 Identities = 55/91 (60%), Positives = 74/91 (81%), Gaps = 3/91 (3%) Frame = +1 Query: 1 AQFDVAKAIRTDT---ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTR 171 ++FD ++ + D+ I+ GLE LS+GN+ I+RFRM RKG+TQVL+RLSFI +MG +T+ Sbjct: 427 SRFDFSQCLNKDSRYSISLGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITK 486 Query: 172 MTSQFEKTRKVSGPRALHPSQWGMLCPADTP 264 ++ QFEK+RKVSGPR+L PSQWGMLCP DTP Sbjct: 487 ISPQFEKSRKVSGPRSLQPSQWGMLCPCDTP 517 [147][TOP] >UniRef100_C5DEU3 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS 6340 RepID=C5DEU3_LACTC Length = 1144 Score = 116 bits (291), Expect = 7e-25 Identities = 53/80 (66%), Positives = 70/80 (87%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 + ++ I+ GL A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV Sbjct: 422 VHSNNISSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 481 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRAL PSQ+GMLC +DTP Sbjct: 482 SGPRALQPSQFGMLCTSDTP 501 [148][TOP] >UniRef100_C4V6K7 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01 RepID=C4V6K7_NOSCE Length = 1091 Score = 116 bits (291), Expect = 7e-25 Identities = 53/80 (66%), Positives = 66/80 (82%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 ++T+ IT ++ A+SSGNW +RRFRM+R GVT VL R S+I+A+GMMT++ S FEKTRKV Sbjct: 390 LQTNIITTSMQRAISSGNWNLRRFRMDRSGVTHVLIRHSYISAVGMMTKVNSHFEKTRKV 449 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPRALH S WGM CPADTP Sbjct: 450 SGPRALHTSSWGMFCPADTP 469 [149][TOP] >UniRef100_Q4QD43 DNA-directed RNA polymerase n=1 Tax=Leishmania major RepID=Q4QD43_LEIMA Length = 1132 Score = 116 bits (290), Expect = 9e-25 Identities = 51/79 (64%), Positives = 65/79 (82%) Frame = +1 Query: 28 RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 207 + + I G+ A+SSG W ++RF M R+G+TQVLSRLS+IA++GMMTR+ S FEKTRKVS Sbjct: 419 KMEVIQNGMRMAISSGRWDLKRFNMNRQGITQVLSRLSYIASLGMMTRLASSFEKTRKVS 478 Query: 208 GPRALHPSQWGMLCPADTP 264 GPR+L PSQWGM+CP DTP Sbjct: 479 GPRSLQPSQWGMVCPCDTP 497 [150][TOP] >UniRef100_Q6CEE6 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica RepID=Q6CEE6_YARLI Length = 1169 Score = 116 bits (290), Expect = 9e-25 Identities = 56/90 (62%), Positives = 73/90 (81%), Gaps = 2/90 (2%) Frame = +1 Query: 1 AQFDVAKAIRTD--TITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRM 174 + FD + T +IT G+ A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR+ Sbjct: 423 SMFDALLNLETHRGSITSGMNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRI 482 Query: 175 TSQFEKTRKVSGPRALHPSQWGMLCPADTP 264 +SQFEK+RKVSGPRAL PSQ+GMLC +DTP Sbjct: 483 SSQFEKSRKVSGPRALQPSQFGMLCTSDTP 512 [151][TOP] >UniRef100_A4HBG9 DNA-directed RNA polymerase n=1 Tax=Leishmania braziliensis RepID=A4HBG9_LEIBR Length = 1125 Score = 115 bits (289), Expect = 1e-24 Identities = 51/79 (64%), Positives = 64/79 (81%) Frame = +1 Query: 28 RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 207 + + I G+ A+SSG W ++RF M R+G+TQVLSRLS+IA +GMMTR+ S FEKTRKVS Sbjct: 412 KMEVIQNGMRMAISSGRWDLKRFNMNRQGITQVLSRLSYIACLGMMTRLASSFEKTRKVS 471 Query: 208 GPRALHPSQWGMLCPADTP 264 GPR+L PSQWGM+CP DTP Sbjct: 472 GPRSLQPSQWGMVCPCDTP 490 [152][TOP] >UniRef100_Q6E6F3 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae RepID=Q6E6F3_ANTLO Length = 1014 Score = 115 bits (287), Expect = 2e-24 Identities = 52/80 (65%), Positives = 65/80 (81%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 ++ + I+ A+S+GNW +RRFRMER GVTQVLSRLS+IA +G M ++ SQFEKTRK+ Sbjct: 318 LQVNLISNSFVRAISTGNWTVRRFRMERAGVTQVLSRLSYIAMIGSMAKIQSQFEKTRKI 377 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPR+LH S WGMLCPADTP Sbjct: 378 SGPRSLHTSSWGMLCPADTP 397 [153][TOP] >UniRef100_Q4D9P5 DNA-directed RNA polymerase n=1 Tax=Trypanosoma cruzi RepID=Q4D9P5_TRYCR Length = 1130 Score = 114 bits (284), Expect = 4e-24 Identities = 50/79 (63%), Positives = 64/79 (81%) Frame = +1 Query: 28 RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 207 + + I G+ ALSSG W ++RF M R+G+TQVLSRLS+IA +GMMTR+ S FEK+RK+S Sbjct: 417 KLEVIQSGMRVALSSGRWELKRFNMSRQGITQVLSRLSYIACIGMMTRLASSFEKSRKIS 476 Query: 208 GPRALHPSQWGMLCPADTP 264 GPR+L PSQWGM+CP DTP Sbjct: 477 GPRSLQPSQWGMVCPCDTP 495 [154][TOP] >UniRef100_Q236N3 DNA-directed RNA polymerase n=1 Tax=Tetrahymena thermophila SB210 RepID=Q236N3_TETTH Length = 1141 Score = 114 bits (284), Expect = 4e-24 Identities = 51/77 (66%), Positives = 67/77 (87%) Frame = +1 Query: 34 DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 213 D IT GL +A+S+GNW I+RFRM+ GVTQVL+R+S+IAA+GMMTRM SQF+K+RK++GP Sbjct: 403 DIITQGLNNAISTGNWTIKRFRMDTVGVTQVLARISYIAAIGMMTRMNSQFKKSRKLTGP 462 Query: 214 RALHPSQWGMLCPADTP 264 R+L S WG++CPADTP Sbjct: 463 RSLLGSHWGLVCPADTP 479 [155][TOP] >UniRef100_Q8SQY8 DNA-directed RNA polymerase n=1 Tax=Encephalitozoon cuniculi RepID=Q8SQY8_ENCCU Length = 1110 Score = 114 bits (284), Expect = 4e-24 Identities = 52/80 (65%), Positives = 65/80 (81%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 ++ + IT L A+S+GNW ++RFRMER GVT VLSR S+I+A+GMMT++ S FEKTRKV Sbjct: 390 LQANMITSTLARAISTGNWNLKRFRMERSGVTHVLSRHSYISALGMMTKINSHFEKTRKV 449 Query: 205 SGPRALHPSQWGMLCPADTP 264 SGPR+LH S WGMLCP DTP Sbjct: 450 SGPRSLHTSSWGMLCPVDTP 469 [156][TOP] >UniRef100_C9ZHX4 DNA-directed RNA polymerase III, putative n=2 Tax=Trypanosoma brucei RepID=C9ZHX4_TRYBG Length = 1129 Score = 112 bits (281), Expect = 1e-23 Identities = 49/79 (62%), Positives = 64/79 (81%) Frame = +1 Query: 28 RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 207 + + I G+ ALSSG W ++RF M R+G+TQVLSRLS+I+ +GMMTR+ S FEK+RK+S Sbjct: 416 KMEVIQNGMRVALSSGRWELKRFNMSRQGITQVLSRLSYISCIGMMTRLASSFEKSRKIS 475 Query: 208 GPRALHPSQWGMLCPADTP 264 GPR+L PSQWGM+CP DTP Sbjct: 476 GPRSLQPSQWGMVCPCDTP 494 [157][TOP] >UniRef100_A7AM79 DNA-directed RNA polymerase, beta subunit, putative n=1 Tax=Babesia bovis RepID=A7AM79_BABBO Length = 1171 Score = 112 bits (280), Expect = 1e-23 Identities = 51/85 (60%), Positives = 68/85 (80%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 D ++ TD IT G+++ +S+GNW I+RFR+ER GV+Q+LSRLS+I+ +GMMT+ SQFE Sbjct: 451 DCLVSLPTDIITRGMQATISTGNWNIKRFRIERSGVSQILSRLSYISCLGMMTKTNSQFE 510 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 K RKVS PRAL PSQ G++CP DTP Sbjct: 511 KGRKVSKPRALQPSQLGLICPCDTP 535 [158][TOP] >UniRef100_A9BK45 DNA-directed RNA polymerase n=1 Tax=Cryptophyta RepID=A9BK45_9CRYP Length = 1100 Score = 110 bits (274), Expect = 6e-23 Identities = 47/80 (58%), Positives = 66/80 (82%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 +R D IT GLE + S+GNWI+++ ++E+ GVTQ LSRLSFI+++ ++T++TSQ EK RK+ Sbjct: 398 LRQDIITNGLEYSFSTGNWIVKKLKIEKNGVTQTLSRLSFISSISIVTKITSQNEKIRKI 457 Query: 205 SGPRALHPSQWGMLCPADTP 264 GPR+LH SQWGM+CP DTP Sbjct: 458 RGPRSLHSSQWGMICPTDTP 477 [159][TOP] >UniRef100_UPI00006A103B DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA polymerase III subunit C2) (DNA-directed RNA polymerase III subunit B) (DNA-directed RNA polymerase III 127.6 kDa polypeptide) (C128). n=1 Tax=Xenopus (Silurana) tropicalis RepID=UPI00006A103B Length = 1122 Score = 109 bits (273), Expect = 8e-23 Identities = 52/72 (72%), Positives = 65/72 (90%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+SSGNW ++RF+M+R+GVTQVLSRLS+IAA+GMMTR++S Sbjct: 401 AQFDVVKHMRQDQITNGMVNAISSGNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISS 460 Query: 181 QFEKTRKVSGPR 216 QFEKTRKVSGPR Sbjct: 461 QFEKTRKVSGPR 472 [160][TOP] >UniRef100_A2E3T5 DNA-directed RNA polymerase n=1 Tax=Trichomonas vaginalis G3 RepID=A2E3T5_TRIVA Length = 1142 Score = 105 bits (263), Expect = 1e-21 Identities = 46/85 (54%), Positives = 71/85 (83%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 ++A+A+ ++TIT+GL+ A+SSGNW I RF+M R GV+Q+L R+S++ + M+TR++S FE Sbjct: 406 NIAQAMHSETITHGLKYAISSGNWNITRFKMMRAGVSQLLGRMSYLQFVSMVTRISSHFE 465 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 KT+KV+G R L+PSQ+G +CP+DTP Sbjct: 466 KTQKVAGARLLYPSQFGFICPSDTP 490 [161][TOP] >UniRef100_B9F8X6 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9F8X6_ORYSJ Length = 1115 Score = 105 bits (261), Expect = 2e-21 Identities = 50/75 (66%), Positives = 64/75 (85%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 D++ I+ + IT+GLE A+S+GNW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFE Sbjct: 469 DLSLHIKENIITHGLERAISTGNWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFE 528 Query: 190 KTRKVSGPRALHPSQ 234 KTRK SGPRAL PSQ Sbjct: 529 KTRKTSGPRALQPSQ 543 [162][TOP] >UniRef100_B8AR02 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group RepID=B8AR02_ORYSI Length = 1117 Score = 105 bits (261), Expect = 2e-21 Identities = 50/75 (66%), Positives = 64/75 (85%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 D++ I+ + IT+GLE A+S+GNW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFE Sbjct: 471 DLSLHIKENIITHGLERAISTGNWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFE 530 Query: 190 KTRKVSGPRALHPSQ 234 KTRK SGPRAL PSQ Sbjct: 531 KTRKTSGPRALQPSQ 545 [163][TOP] >UniRef100_C5KAB2 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5KAB2_9ALVE Length = 1140 Score = 103 bits (256), Expect = 8e-21 Identities = 53/92 (57%), Positives = 67/92 (72%), Gaps = 6/92 (6%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESAL------SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMT 168 F + R T GL+S ++GN I+RFR++R GV+QVLSR SFIAA+G MT Sbjct: 396 FQQTSSARAGRSTVGLDSGYPDVLLRATGN--IKRFRIDRSGVSQVLSRFSFIAALGAMT 453 Query: 169 RMTSQFEKTRKVSGPRALHPSQWGMLCPADTP 264 R+ SQFEK+RK++GPRAL PSQWGMLCP+DTP Sbjct: 454 RVKSQFEKSRKLAGPRALQPSQWGMLCPSDTP 485 [164][TOP] >UniRef100_A0D7M6 DNA-directed RNA polymerase n=1 Tax=Paramecium tetraurelia RepID=A0D7M6_PARTE Length = 1131 Score = 101 bits (251), Expect = 3e-20 Identities = 46/75 (61%), Positives = 62/75 (82%) Frame = +1 Query: 40 ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRA 219 IT GL A+ +G W I+RF M+R+GVTQ+L+R+S+ +A+GM+T+M SQ +KT KVSGPRA Sbjct: 398 ITKGLNRAIKTGKWTIQRFHMDRQGVTQLLARISYTSALGMLTKMRSQVQKTLKVSGPRA 457 Query: 220 LHPSQWGMLCPADTP 264 L SQ+GM+CPADTP Sbjct: 458 LVGSQFGMICPADTP 472 [165][TOP] >UniRef100_UPI00016E4F58 UPI00016E4F58 related cluster n=1 Tax=Takifugu rubripes RepID=UPI00016E4F58 Length = 1118 Score = 99.8 bits (247), Expect = 9e-20 Identities = 47/71 (66%), Positives = 61/71 (85%) Frame = +1 Query: 1 AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++S Sbjct: 397 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISS 456 Query: 181 QFEKTRKVSGP 213 QFEKTRK P Sbjct: 457 QFEKTRKSDTP 467 [166][TOP] >UniRef100_Q98S96 DNA-directed RNA polymerase n=1 Tax=Guillardia theta RepID=Q98S96_GUITH Length = 1049 Score = 95.5 bits (236), Expect = 2e-18 Identities = 39/80 (48%), Positives = 61/80 (76%) Frame = +1 Query: 25 IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204 I++D I+YG+E+A +GNW I ++ +++ G+TQ+LSRLSF+++ M+ + +S FEKTRK Sbjct: 377 IKSDFISYGIENAFITGNWKINKYGIDKNGITQILSRLSFMSSFSMLLKTSSNFEKTRKS 436 Query: 205 SGPRALHPSQWGMLCPADTP 264 PR LHP+QW +C +DTP Sbjct: 437 ISPRNLHPTQWRFICTSDTP 456 [167][TOP] >UniRef100_C6LZ34 DNA-directed RNA polymerase n=1 Tax=Giardia intestinalis ATCC 50581 RepID=C6LZ34_GIALA Length = 1239 Score = 92.0 bits (227), Expect = 2e-17 Identities = 43/86 (50%), Positives = 60/86 (69%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186 +DV + IT SA+S+GNW I R ++R GV+QVLSRLS+I+ +G +TR++S F Sbjct: 493 YDVVSLVDPSIITRAFNSAISTGNWKIERIGVDRVGVSQVLSRLSYISTLGQVTRLSSTF 552 Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264 +K K SGPR L+ SQ G+ CP+DTP Sbjct: 553 DKAMKSSGPRMLNFSQMGIFCPSDTP 578 [168][TOP] >UniRef100_A8B2N4 DNA-directed RNA polymerase n=1 Tax=Giardia lamblia ATCC 50803 RepID=A8B2N4_GIALA Length = 1238 Score = 91.7 bits (226), Expect = 2e-17 Identities = 41/86 (47%), Positives = 61/86 (70%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186 +D+ + IT SA+S+GNW I + ++R GV+Q+LSRLS+I+A+G +TR++S F Sbjct: 492 YDIVSLVDPSIITRAFNSAISTGNWKIEKIGVDRVGVSQILSRLSYISALGQVTRLSSTF 551 Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264 +K K SGPR L+ SQ G+ CP+DTP Sbjct: 552 DKAMKSSGPRMLNFSQMGIFCPSDTP 577 [169][TOP] >UniRef100_C5LU72 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LU72_9ALVE Length = 1171 Score = 79.3 bits (194), Expect = 1e-13 Identities = 40/88 (45%), Positives = 61/88 (69%), Gaps = 2/88 (2%) Frame = +1 Query: 7 FDVAKAIRT-DTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 FD+ AIR+ +IT GL L++GNW I + + R GV+QVL+RL+F++ M + RM + Sbjct: 416 FDLNSAIRSASSITDGLRYQLATGNWGIDKSGKSVRTGVSQVLNRLTFMSTMSHLRRMNT 475 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 E++ K++ PR LH + WGM+CPA+TP Sbjct: 476 PLERSGKLAKPRQLHNTHWGMICPAETP 503 [170][TOP] >UniRef100_C5LHP3 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983 RepID=C5LHP3_9ALVE Length = 993 Score = 79.3 bits (194), Expect = 1e-13 Identities = 40/88 (45%), Positives = 61/88 (69%), Gaps = 2/88 (2%) Frame = +1 Query: 7 FDVAKAIRT-DTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 FD+ AIR+ +IT GL L++GNW I + + R GV+QVL+RL+F++ M + RM + Sbjct: 454 FDLNSAIRSASSITDGLRYQLATGNWGIDKSGKSVRTGVSQVLNRLTFMSTMSHLRRMNT 513 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 E++ K++ PR LH + WGM+CPA+TP Sbjct: 514 PLERSGKLAKPRQLHNTHWGMICPAETP 541 [171][TOP] >UniRef100_Q1L6D8 DNA-directed RNA polymerase (Fragment) n=2 Tax=Dianthus RepID=Q1L6D8_DIACA Length = 674 Score = 77.8 bits (190), Expect = 4e-13 Identities = 36/81 (44%), Positives = 54/81 (66%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL++ + + + R+ S + K Sbjct: 57 AIKAKTITSGLKYSLATGNWGAANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 116 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH SQWGM+CPA+TP Sbjct: 117 LAKPRQLHNSQWGMMCPAETP 137 [172][TOP] >UniRef100_UPI0001926137 PREDICTED: similar to predicted protein n=1 Tax=Hydra magnipapillata RepID=UPI0001926137 Length = 1426 Score = 77.4 bits (189), Expect = 5e-13 Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F + AI+T TIT GL +L++GNW ++ R GV+QVL+RL+F + + + R+ S Sbjct: 434 FKIELAIKTKTITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSP 493 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 494 IGRDGKLARPRQLHNTHWGMICPAETP 520 [173][TOP] >UniRef100_C1ML14 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1ML14_9CHLO Length = 1172 Score = 77.4 bits (189), Expect = 5e-13 Identities = 36/87 (41%), Positives = 57/87 (65%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 + + A++ TIT GL+ +L++GNW + + R GV+QVL+RLSF + + + R+ S Sbjct: 425 EIQLTLAVKAKTITSGLKYSLATGNWGAQGAQDIRAGVSQVLNRLSFSSTLSHLRRLNSP 484 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH S WGM+CPA+TP Sbjct: 485 IGREGKLAKPRQLHNSHWGMVCPAETP 511 [174][TOP] >UniRef100_B8Y3L8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Arthonia caesia RepID=B8Y3L8_9PEZI Length = 685 Score = 77.4 bits (189), Expect = 5e-13 Identities = 37/88 (42%), Positives = 60/88 (68%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTS 180 +F++A AI+ +TIT GL +L++GNW ++ + K GV+QVLSR +F AA+ + R + Sbjct: 28 EFNLAMAIKPNTITQGLRYSLATGNWGDQKKAAKAKAGVSQVLSRYTFAAALSHLRRTNT 87 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WG++CPA+TP Sbjct: 88 PIGRDGKIAKPRQLHNTHWGLVCPAETP 115 [175][TOP] >UniRef100_A1YIE4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix frontalis RepID=A1YIE4_NEOFR Length = 915 Score = 77.4 bits (189), Expect = 5e-13 Identities = 36/88 (40%), Positives = 60/88 (68%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIR-RFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 +F++ AIR +TIT GL+ +L++GNW + +F R GV+QVL+R +F + + + R+ + Sbjct: 240 EFNLNVAIRPNTITDGLKYSLATGNWGAQSKFMQSRAGVSQVLNRYTFASTLSHLRRLNT 299 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 300 PIGRDGKLAKPRQLHNTHWGMVCPAETP 327 [176][TOP] >UniRef100_Q8SR75 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Encephalitozoon cuniculi RepID=RPB2_ENCCU Length = 1141 Score = 77.4 bits (189), Expect = 5e-13 Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTS 180 +F++A ++ IT G AL++GNW + M+ R GV QVL+R +F++ + + R+ + Sbjct: 400 EFNIALGLKASIITQGFRYALATGNWGDQAKAMQTRAGVAQVLNRYNFVSTLSHLRRVNT 459 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 EK K++ PR LH + WGM+CPA+TP Sbjct: 460 PIEKEGKLAAPRQLHNTHWGMVCPAETP 487 [177][TOP] >UniRef100_Q1L6E0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coriaria sarmentosa RepID=Q1L6E0_9ROSI Length = 952 Score = 77.0 bits (188), Expect = 6e-13 Identities = 36/81 (44%), Positives = 54/81 (66%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL++ + + + R+ S + K Sbjct: 334 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 393 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH SQWGM+CPA+TP Sbjct: 394 LAKPRQLHNSQWGMMCPAETP 414 [178][TOP] >UniRef100_Q1L6B6 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Nepenthes maxima RepID=Q1L6B6_9CARY Length = 667 Score = 77.0 bits (188), Expect = 6e-13 Identities = 36/81 (44%), Positives = 54/81 (66%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL++ + + + R+ S + K Sbjct: 335 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 394 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH SQWGM+CPA+TP Sbjct: 395 LAKPRQLHNSQWGMMCPAETP 415 [179][TOP] >UniRef100_Q1L5Z0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nicotiana sylvestris RepID=Q1L5Z0_NICSY Length = 1087 Score = 77.0 bits (188), Expect = 6e-13 Identities = 36/81 (44%), Positives = 54/81 (66%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL++ + + + R+ S + K Sbjct: 341 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 400 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH SQWGM+CPA+TP Sbjct: 401 LAKPRQLHNSQWGMMCPAETP 421 [180][TOP] >UniRef100_Q1L5Y9 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida RepID=Q1L5Y9_PETHY Length = 1195 Score = 77.0 bits (188), Expect = 6e-13 Identities = 36/81 (44%), Positives = 54/81 (66%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL++ + + + R+ S + K Sbjct: 442 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 501 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH SQWGM+CPA+TP Sbjct: 502 LAKPRQLHNSQWGMMCPAETP 522 [181][TOP] >UniRef100_Q1L5B7 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Camellia japonica RepID=Q1L5B7_9ERIC Length = 417 Score = 77.0 bits (188), Expect = 6e-13 Identities = 36/81 (44%), Positives = 54/81 (66%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL++ + + + R+ S + K Sbjct: 334 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 393 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH SQWGM+CPA+TP Sbjct: 394 LAKPRQLHNSQWGMMCPAETP 414 [182][TOP] >UniRef100_Q1L5B5 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum RepID=Q1L5B5_RHOMC Length = 1191 Score = 77.0 bits (188), Expect = 6e-13 Identities = 36/81 (44%), Positives = 54/81 (66%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL++ + + + R+ S + K Sbjct: 438 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 497 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH SQWGM+CPA+TP Sbjct: 498 LAKPRQLHNSQWGMMCPAETP 518 [183][TOP] >UniRef100_Q1L5B3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Astilbe sp. Yoshikawa s.n. RepID=Q1L5B3_9MAGN Length = 951 Score = 77.0 bits (188), Expect = 6e-13 Identities = 36/81 (44%), Positives = 54/81 (66%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL++ + + + R+ S + K Sbjct: 334 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 393 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH SQWGM+CPA+TP Sbjct: 394 LAKPRQLHNSQWGMMCPAETP 414 [184][TOP] >UniRef100_Q1L5A9 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Liquidambar acalycina RepID=Q1L5A9_9MAGN Length = 453 Score = 77.0 bits (188), Expect = 6e-13 Identities = 36/81 (44%), Positives = 54/81 (66%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL++ + + + R+ S + K Sbjct: 334 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 393 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH SQWGM+CPA+TP Sbjct: 394 LAKPRQLHNSQWGMMCPAETP 414 [185][TOP] >UniRef100_Q1L5A7 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Spinacia oleracea RepID=Q1L5A7_SPIOL Length = 495 Score = 77.0 bits (188), Expect = 6e-13 Identities = 36/81 (44%), Positives = 54/81 (66%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL++ + + + R+ S + K Sbjct: 398 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 457 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH SQWGM+CPA+TP Sbjct: 458 LAKPRQLHNSQWGMMCPAETP 478 [186][TOP] >UniRef100_C1E1U0 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299 RepID=C1E1U0_9CHLO Length = 1178 Score = 77.0 bits (188), Expect = 6e-13 Identities = 36/81 (44%), Positives = 55/81 (67%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 A++ TIT GL+ +L++GNW + + R GV+QVL+RLSF + + + R+ S + K Sbjct: 438 AVKAKTITSGLKYSLATGNWGAQGAQDIRAGVSQVLNRLSFSSTLSHLRRLNSPIGREGK 497 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH S WGM+CPA+TP Sbjct: 498 LAKPRQLHNSHWGMVCPAETP 518 [187][TOP] >UniRef100_B9RZ91 DNA-directed RNA polymerase n=1 Tax=Ricinus communis RepID=B9RZ91_RICCO Length = 1194 Score = 77.0 bits (188), Expect = 6e-13 Identities = 36/81 (44%), Positives = 54/81 (66%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL++ + + + R+ S + K Sbjct: 441 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 500 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH SQWGM+CPA+TP Sbjct: 501 LAKPRQLHNSQWGMMCPAETP 521 [188][TOP] >UniRef100_B9H2V2 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa RepID=B9H2V2_POPTR Length = 690 Score = 77.0 bits (188), Expect = 6e-13 Identities = 36/81 (44%), Positives = 54/81 (66%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL++ + + + R+ S + K Sbjct: 438 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 497 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH SQWGM+CPA+TP Sbjct: 498 LAKPRQLHNSQWGMMCPAETP 518 [189][TOP] >UniRef100_Q27548 DNA-directed RNA polymerase (Fragment) n=1 Tax=Crassostrea gigas RepID=Q27548_CRAGI Length = 859 Score = 77.0 bits (188), Expect = 6e-13 Identities = 37/87 (42%), Positives = 59/87 (67%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ AI+T IT GL+ +L++GNW ++ R GV+QVL+RL+F + + + R+ S Sbjct: 236 FNLELAIKTRIITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSP 295 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH +QWGM+CPA+TP Sbjct: 296 IGRDGKLARPRQLHNTQWGMICPAETP 322 [190][TOP] >UniRef100_B3S2W9 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens RepID=B3S2W9_TRIAD Length = 1196 Score = 77.0 bits (188), Expect = 6e-13 Identities = 36/87 (41%), Positives = 58/87 (66%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ AI+T IT GL +L++GNW ++ R GV+QVL+RL+F++ + + R+ S Sbjct: 417 FNLELAIKTKIITDGLRYSLATGNWGDQKKAHQSRAGVSQVLNRLTFVSTLSHLRRLNSP 476 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 477 IGRDGKLARPRQLHNTHWGMICPAETP 503 [191][TOP] >UniRef100_A7ATA0 DNA-directed RNA polymerase n=1 Tax=Babesia bovis RepID=A7ATA0_BABBO Length = 1207 Score = 77.0 bits (188), Expect = 6e-13 Identities = 39/89 (43%), Positives = 61/89 (68%), Gaps = 2/89 (2%) Frame = +1 Query: 4 QFDVAKAIRTDT-ITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177 +FDVA A+R+ T IT+GL+ L +GNW R ++ R GV+QVL+RL+F + + + R+ Sbjct: 470 EFDVAGAVRSATQITHGLQYQLLTGNWGRDRDGKVVRTGVSQVLNRLTFASYLSHLRRLN 529 Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264 + + K++ PR LH + WGM+CPA+TP Sbjct: 530 TPLGREGKIAKPRQLHNTHWGMICPAETP 558 [192][TOP] >UniRef100_Q207F5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tremellodendron pallidum RepID=Q207F5_9HOMO Length = 716 Score = 77.0 bits (188), Expect = 6e-13 Identities = 36/87 (41%), Positives = 59/87 (67%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTSQ 183 FDV++AI+ TI+ GL+ +L++GNW ++ M K GV+QVL+R +F + + + R + Sbjct: 42 FDVSRAIKVATISNGLKYSLATGNWGDQQHAMSSKAGVSQVLNRYTFASTLSHLRRCNTP 101 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 102 LGREGKIAKPRQLHNTHWGMVCPAETP 128 [193][TOP] >UniRef100_Q0MT73 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Wallemia muriae RepID=Q0MT73_WALMU Length = 365 Score = 77.0 bits (188), Expect = 6e-13 Identities = 34/88 (38%), Positives = 60/88 (68%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 +F++ +A++ +TIT GL+ +L++GNW ++F R GV+QVL+R +F + + + R + Sbjct: 40 EFNLNQAVKANTITNGLKYSLATGNWGDQKKFXQARAGVSQVLNRYTFASTLSHLRRCNT 99 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 100 PIGRDGKIAKPRQLHNTHWGMVCPAETP 127 [194][TOP] >UniRef100_Q0MT72 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Wallemia sebi RepID=Q0MT72_WALSE Length = 374 Score = 77.0 bits (188), Expect = 6e-13 Identities = 34/88 (38%), Positives = 60/88 (68%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 +F++ +A++ +TIT GL+ +L++GNW ++F R GV+QVL+R +F + + + R + Sbjct: 46 EFNLNQAVKANTITNGLKYSLATGNWGDQKKFMQARAGVSQVLNRYTFASTLSHLRRCNT 105 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 106 PIGRDGKIAKPRQLHNTHWGMVCPAETP 133 [195][TOP] >UniRef100_Q42877 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Solanum lycopersicum RepID=RPB2_SOLLC Length = 1191 Score = 77.0 bits (188), Expect = 6e-13 Identities = 36/81 (44%), Positives = 54/81 (66%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL++ + + + R+ S + K Sbjct: 438 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 497 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH SQWGM+CPA+TP Sbjct: 498 LAKPRQLHNSQWGMMCPAETP 518 [196][TOP] >UniRef100_P38420 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Arabidopsis thaliana RepID=RPB2_ARATH Length = 1188 Score = 77.0 bits (188), Expect = 6e-13 Identities = 36/81 (44%), Positives = 54/81 (66%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL++ + + + R+ S + K Sbjct: 439 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 498 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH SQWGM+CPA+TP Sbjct: 499 LAKPRQLHNSQWGMMCPAETP 519 [197][TOP] >UniRef100_A9SJE5 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SJE5_PHYPA Length = 1185 Score = 76.6 bits (187), Expect = 8e-13 Identities = 35/87 (40%), Positives = 57/87 (65%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 + ++A A++ TIT GL+ +L++GNW R GV+QVL+RL++ + + + R+ S Sbjct: 426 EINLAYAVKAKTITSGLKYSLATGNWGQANTAGVRAGVSQVLNRLTYASTLSHLRRLNSP 485 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH S WGM+CPA+TP Sbjct: 486 IGREGKLAKPRQLHNSHWGMMCPAETP 512 [198][TOP] >UniRef100_Q27670 DNA-directed RNA polymerase (Fragment) n=1 Tax=Helobdella stagnalis RepID=Q27670_9ANNE Length = 859 Score = 76.6 bits (187), Expect = 8e-13 Identities = 37/87 (42%), Positives = 59/87 (67%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ AI+T TIT GL+ +L++GNW ++ R GV+QVL+RL+F + + + R+ S Sbjct: 236 FNLELAIKTRTITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSP 295 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 296 IGRDGKLARPRQLHNTLWGMICPAETP 322 [199][TOP] >UniRef100_Q2I5U9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces arbuscula RepID=Q2I5U9_ALLAR Length = 584 Score = 76.6 bits (187), Expect = 8e-13 Identities = 37/88 (42%), Positives = 60/88 (68%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTS 180 +F++ AI ++TIT GL AL++GNW ++ ME R GV+QVL+R +F + + + R+ + Sbjct: 24 EFNLNMAINSNTITNGLRYALATGNWGDQKKFMETRAGVSQVLNRYTFASTLSHLRRLNT 83 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 84 PIGREGKLAKPRQLHNTHWGMVCPAETP 111 [200][TOP] >UniRef100_C4V8X8 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01 RepID=C4V8X8_NOSCE Length = 1143 Score = 76.6 bits (187), Expect = 8e-13 Identities = 34/87 (39%), Positives = 56/87 (64%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTSQ 183 F++A ++ TI G A+++GNW + M+ K GV QVL+R +F++ + + R+ + Sbjct: 401 FNIALGLKASTIAQGFRYAIATGNWGDQAHAMQSKAGVAQVLNRYNFVSTLSHLRRVNTP 460 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 EK K++ PR LH + WGM+CPA+TP Sbjct: 461 IEKEGKLAKPRQLHNTHWGMICPAETP 487 [201][TOP] >UniRef100_A1YIE3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix frontalis RepID=A1YIE3_NEOFR Length = 915 Score = 76.6 bits (187), Expect = 8e-13 Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIR-RFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 +F++ AIR +TI+ GL+ +L++GNW + +F R GV+QVL+R +F + + + R+ + Sbjct: 240 EFNLNSAIRPNTISDGLKYSLATGNWGAQSKFMQSRAGVSQVLNRYTFASTLSHLRRLNT 299 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 300 PIGRDGKLAKPRQLHNTHWGMVCPAETP 327 [202][TOP] >UniRef100_A1YID6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus RepID=A1YID6_ALLMA Length = 896 Score = 76.6 bits (187), Expect = 8e-13 Identities = 37/88 (42%), Positives = 60/88 (68%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTS 180 +F++ AI ++TIT GL AL++GNW ++ ME R GV+QVL+R +F + + + R+ + Sbjct: 229 EFNLNMAINSNTITNGLRYALATGNWGDQKKFMETRAGVSQVLNRYTFASTLSHLRRLNT 288 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 289 PIGREGKLAKPRQLHNTHWGMVCPAETP 316 [203][TOP] >UniRef100_A1YID5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus RepID=A1YID5_ALLMA Length = 867 Score = 76.6 bits (187), Expect = 8e-13 Identities = 37/88 (42%), Positives = 60/88 (68%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTS 180 +F++ AI ++TIT GL AL++GNW ++ ME R GV+QVL+R +F + + + R+ + Sbjct: 229 EFNLNMAINSNTITNGLRYALATGNWGDQKKFMETRAGVSQVLNRYTFASTLSHLRRLNT 288 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 289 PIGREGKLAKPRQLHNTHWGMVCPAETP 316 [204][TOP] >UniRef100_Q1L6E5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Callistemon subulatus RepID=Q1L6E5_9MYRT Length = 952 Score = 76.3 bits (186), Expect = 1e-12 Identities = 36/81 (44%), Positives = 54/81 (66%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL++ + + + R+ S + K Sbjct: 334 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLPHLRRLNSPIGREGK 393 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH SQWGM+CPA+TP Sbjct: 394 LAKPRQLHNSQWGMMCPAETP 414 [205][TOP] >UniRef100_Q1L6C3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Homalocladium platycladum RepID=Q1L6C3_9CARY Length = 875 Score = 76.3 bits (186), Expect = 1e-12 Identities = 36/81 (44%), Positives = 54/81 (66%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL++ + + + R+ S + K Sbjct: 334 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPTGREGK 393 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH SQWGM+CPA+TP Sbjct: 394 LAKPRQLHNSQWGMMCPAETP 414 [206][TOP] >UniRef100_Q1L5Z4 DNA-directed RNA polymerase n=1 Tax=Nicotiana sylvestris RepID=Q1L5Z4_NICSY Length = 1203 Score = 76.3 bits (186), Expect = 1e-12 Identities = 36/81 (44%), Positives = 53/81 (65%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL+F + + + R+ S + K Sbjct: 452 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGK 511 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH S WGM+CPA+TP Sbjct: 512 LAKPRQLHNSHWGMMCPAETP 532 [207][TOP] >UniRef100_Q1L5Z2 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida RepID=Q1L5Z2_PETHY Length = 1203 Score = 76.3 bits (186), Expect = 1e-12 Identities = 36/81 (44%), Positives = 53/81 (65%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL+F + + + R+ S + K Sbjct: 452 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGK 511 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH S WGM+CPA+TP Sbjct: 512 LAKPRQLHNSHWGMMCPAETP 532 [208][TOP] >UniRef100_Q1L5Z1 DNA-directed RNA polymerase n=1 Tax=Solanum lycopersicum RepID=Q1L5Z1_SOLLC Length = 1205 Score = 76.3 bits (186), Expect = 1e-12 Identities = 36/81 (44%), Positives = 53/81 (65%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL+F + + + R+ S + K Sbjct: 457 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGK 516 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH S WGM+CPA+TP Sbjct: 517 LAKPRQLHNSHWGMMCPAETP 537 [209][TOP] >UniRef100_Q1L5B1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Liriodendron tulipifera RepID=Q1L5B1_LIRTU Length = 942 Score = 76.3 bits (186), Expect = 1e-12 Identities = 36/81 (44%), Positives = 53/81 (65%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL+F + + + R+ S + K Sbjct: 326 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGK 385 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH S WGM+CPA+TP Sbjct: 386 LAKPRQLHNSHWGMMCPAETP 406 [210][TOP] >UniRef100_Q0MX37 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Tilletia goloskokovii RepID=Q0MX37_9BASI Length = 355 Score = 76.3 bits (186), Expect = 1e-12 Identities = 36/87 (41%), Positives = 60/87 (68%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTSQ 183 F+++ AI++ TIT GL+ +L++GNW ++ M+ K GV+QVL+R +F + + + R + Sbjct: 44 FNLSTAIKSATITNGLKYSLATGNWGDQKKAMQAKAGVSQVLNRYTFASTLSHLRRCNTP 103 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH S WGM+CPA+TP Sbjct: 104 IGRDGKIAKPRQLHNSHWGMVCPAETP 130 [211][TOP] >UniRef100_Q1L6E4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chimonanthus praecox RepID=Q1L6E4_9MAGN Length = 906 Score = 75.9 bits (185), Expect = 1e-12 Identities = 35/81 (43%), Positives = 53/81 (65%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ T+T GL+ +L++GNW R GV+QVL+RL+F + + + R+ S + K Sbjct: 334 AIKAKTVTSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGK 393 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH S WGM+CPA+TP Sbjct: 394 LAKPRQLHNSHWGMMCPAETP 414 [212][TOP] >UniRef100_Q6RYG8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phragmidium sp. MB RepID=Q6RYG8_9BASI Length = 931 Score = 75.9 bits (185), Expect = 1e-12 Identities = 35/87 (40%), Positives = 60/87 (68%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ A++++TIT GL+ +L++GNW ++ M+ K GV+QVL+R +F + + + R + Sbjct: 239 FNLNAAVKSNTITNGLKYSLATGNWGDQKKAMQAKAGVSQVLNRYTFASTLSHLRRCNTP 298 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH S WGM+CPA+TP Sbjct: 299 IGRDGKIAKPRQLHNSHWGMVCPAETP 325 [213][TOP] >UniRef100_Q308L1 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Endocronartium harknessii RepID=Q308L1_9BASI Length = 299 Score = 75.9 bits (185), Expect = 1e-12 Identities = 35/87 (40%), Positives = 60/87 (68%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ A++++TIT GL+ +L++GNW ++ M+ R GV+QVL+R +F + + + R + Sbjct: 22 FNLNTAVKSNTITNGLKYSLATGNWGDQKKAMQARAGVSQVLNRYTFASTLSHLRRCNTP 81 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH S WGM+CPA+TP Sbjct: 82 IGRDGKIAKPRQLHNSHWGMVCPAETP 108 [214][TOP] >UniRef100_Q2I5U8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coelomomyces stegomyiae RepID=Q2I5U8_9FUNG Length = 1080 Score = 75.9 bits (185), Expect = 1e-12 Identities = 37/87 (42%), Positives = 59/87 (67%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ AI ++TIT GL AL++GNW ++ ME R GV+QVL+R +F + + + R+ + Sbjct: 40 FNLNMAINSNTITNGLRYALATGNWGDQKKFMETRAGVSQVLNRYTFASTLSHLRRLNTP 99 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 100 IGREGKLAKPRQLHNTHWGMVCPAETP 126 [215][TOP] >UniRef100_Q2I5T8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Endogone pisiformis RepID=Q2I5T8_9FUNG Length = 720 Score = 75.9 bits (185), Expect = 1e-12 Identities = 34/88 (38%), Positives = 61/88 (69%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTS 180 +F++ A++++TIT GL+ +L++GNW ++ M+ K GV+QVL+R +F + + + R + Sbjct: 39 EFNLTLAVKSNTITNGLKYSLATGNWGDQKKAMQSKAGVSQVLNRYTFASTLSHLRRCNT 98 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 99 PIGRDGKIAKPRQLHNTHWGMVCPAETP 126 [216][TOP] >UniRef100_Q2I5T7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum RepID=Q2I5T7_9FUNG Length = 720 Score = 75.9 bits (185), Expect = 1e-12 Identities = 34/88 (38%), Positives = 61/88 (69%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTS 180 +F++ A++++TIT GL+ +L++GNW ++ M+ R GV+QVL+R +F + + + R + Sbjct: 39 EFNLTLAVKSNTITNGLKYSLATGNWGDQKKAMQARAGVSQVLNRYTFASTLSHLRRCNT 98 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 99 PIGRDGKIAKPRQLHNTHWGMVCPAETP 126 [217][TOP] >UniRef100_Q0MT74 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Wallemia ichthyophaga RepID=Q0MT74_WALIC Length = 365 Score = 75.9 bits (185), Expect = 1e-12 Identities = 34/88 (38%), Positives = 59/88 (67%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 +F++ +A++ +TIT GL+ +L++GNW ++F R GV+QVL+R +F + + + R + Sbjct: 40 EFNLNQAVKANTITNGLKYSLATGNWGDQKKFMQARAGVSQVLNRYTFASTLSHLRRCNT 99 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA TP Sbjct: 100 PIGRDGKIAKPRQLHNTHWGMVCPAXTP 127 [218][TOP] >UniRef100_B3XZD8 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Polyporus tubiformis RepID=B3XZD8_9APHY Length = 286 Score = 75.9 bits (185), Expect = 1e-12 Identities = 34/88 (38%), Positives = 60/88 (68%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTS 180 +FD+++A++ TIT GL+ +L++GNW ++ M K GV+QVL+R ++ + + + R + Sbjct: 26 EFDLSRAVKHTTITNGLKYSLATGNWGDQKKSMSAKAGVSQVLNRYTYASTLSHLRRCNT 85 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 86 PLGREGKIAKPRQLHNTHWGMVCPAETP 113 [219][TOP] >UniRef100_A1YID8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coelomomyces stegomyiae RepID=A1YID8_9FUNG Length = 862 Score = 75.9 bits (185), Expect = 1e-12 Identities = 37/87 (42%), Positives = 59/87 (67%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ AI ++TIT GL AL++GNW ++ ME R GV+QVL+R +F + + + R+ + Sbjct: 230 FNLNMAINSNTITNGLRYALATGNWGDQKKFMETRAGVSQVLNRYTFASTLSHLRRLNTP 289 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 290 IGREGKLAKPRQLHNTHWGMVCPAETP 316 [220][TOP] >UniRef100_A1YID1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum RepID=A1YID1_9FUNG Length = 883 Score = 75.9 bits (185), Expect = 1e-12 Identities = 34/88 (38%), Positives = 61/88 (69%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTS 180 +F++ A++++TIT GL+ +L++GNW ++ M+ R GV+QVL+R +F + + + R + Sbjct: 233 EFNLTLAVKSNTITNGLKYSLATGNWGDQKKAMQARAGVSQVLNRYTFASTLSHLRRCNT 292 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 293 PIGRDGKIAKPRQLHNTHWGMVCPAETP 320 [221][TOP] >UniRef100_UPI0001865901 hypothetical protein BRAFLDRAFT_125505 n=1 Tax=Branchiostoma floridae RepID=UPI0001865901 Length = 1176 Score = 75.5 bits (184), Expect = 2e-12 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ AI+T IT GL+ +L++GNW ++ R GV+QVL+RL+F + + + R+ S Sbjct: 431 FNLELAIKTRIITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSP 490 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH S WGM+CPA+TP Sbjct: 491 IGRDGKLAKPRQLHNSLWGMICPAETP 517 [222][TOP] >UniRef100_Q1L5B4 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum RepID=Q1L5B4_RHOMC Length = 1207 Score = 75.5 bits (184), Expect = 2e-12 Identities = 35/81 (43%), Positives = 53/81 (65%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW R GV+QVL+RL++ + + + R+ S + K Sbjct: 456 AIKAKTITSGLKYSLATGNWGQANSAGSRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 515 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH S WGM+CPA+TP Sbjct: 516 LAKPRQLHNSHWGMMCPAETP 536 [223][TOP] >UniRef100_Q01GR3 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri RepID=Q01GR3_OSTTA Length = 999 Score = 75.5 bits (184), Expect = 2e-12 Identities = 36/81 (44%), Positives = 55/81 (67%) Frame = +1 Query: 22 AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201 AI+ TIT GL+ +L++GNW + + R GV+QVL+RLS+ + + + R+ S + K Sbjct: 277 AIKAKTITQGLKYSLATGNWGSQGAQDIRAGVSQVLNRLSYSSTLSHLRRINSPIGREGK 336 Query: 202 VSGPRALHPSQWGMLCPADTP 264 ++ PR LH S WGM+CPA+TP Sbjct: 337 LAKPRQLHNSLWGMICPAETP 357 [224][TOP] >UniRef100_Q27826 DNA-directed RNA polymerase n=1 Tax=Euplotes octocarinatus RepID=Q27826_EUPOC Length = 1194 Score = 75.5 bits (184), Expect = 2e-12 Identities = 34/86 (39%), Positives = 58/86 (67%), Gaps = 1/86 (1%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRF-RMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186 ++ KA + D I+ GL+ AL++GNW + + GV+QVL+RL+F + + + R+ + Sbjct: 456 NITKAFKKDIISDGLKYALATGNWGTNAAGEVSKTGVSQVLNRLTFASTLSHLRRLNTPL 515 Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264 +K+ K++ PR LH + WGM+CPA+TP Sbjct: 516 QKSGKLTKPRQLHNTHWGMVCPAETP 541 [225][TOP] >UniRef100_C4LUK7 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS RepID=C4LUK7_ENTHI Length = 1170 Score = 75.5 bits (184), Expect = 2e-12 Identities = 37/85 (43%), Positives = 51/85 (60%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 + AK + TIT AL +GNW + R GV QVLSRL+F +A+ + +++S E Sbjct: 421 EYAKPLSFPTITTDFTKALGTGNWPQPGGKESRHGVAQVLSRLTFTSALAYLRKISSPVE 480 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 RK PR LH +QWG +CPA+TP Sbjct: 481 GKRKTQKPRQLHNTQWGYICPAETP 505 [226][TOP] >UniRef100_C3Y5U9 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae RepID=C3Y5U9_BRAFL Length = 1104 Score = 75.5 bits (184), Expect = 2e-12 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ AI+T IT GL+ +L++GNW ++ R GV+QVL+RL+F + + + R+ S Sbjct: 431 FNLELAIKTRIITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSP 490 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH S WGM+CPA+TP Sbjct: 491 IGRDGKLAKPRQLHNSLWGMICPAETP 517 [227][TOP] >UniRef100_B4R0H5 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans RepID=B4R0H5_DROSI Length = 1176 Score = 75.5 bits (184), Expect = 2e-12 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ AI+T+ IT GL +L++GNW ++ R GV+QVL+RL+F + + + R+ S Sbjct: 430 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 489 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGMLCPA+TP Sbjct: 490 IGRDGKLAKPRQLHNTLWGMLCPAETP 516 [228][TOP] >UniRef100_B4PTC0 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba RepID=B4PTC0_DROYA Length = 1176 Score = 75.5 bits (184), Expect = 2e-12 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ AI+T+ IT GL +L++GNW ++ R GV+QVL+RL+F + + + R+ S Sbjct: 430 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 489 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGMLCPA+TP Sbjct: 490 IGRDGKLAKPRQLHNTLWGMLCPAETP 516 [229][TOP] >UniRef100_B4N9I3 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni RepID=B4N9I3_DROWI Length = 1176 Score = 75.5 bits (184), Expect = 2e-12 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ AI+T+ IT GL +L++GNW ++ R GV+QVL+RL+F + + + R+ S Sbjct: 430 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 489 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGMLCPA+TP Sbjct: 490 IGRDGKLAKPRQLHNTLWGMLCPAETP 516 [230][TOP] >UniRef100_B4M040 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis RepID=B4M040_DROVI Length = 1176 Score = 75.5 bits (184), Expect = 2e-12 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ AI+T+ IT GL +L++GNW ++ R GV+QVL+RL+F + + + R+ S Sbjct: 430 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 489 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGMLCPA+TP Sbjct: 490 IGRDGKLAKPRQLHNTLWGMLCPAETP 516 [231][TOP] >UniRef100_B4KDW5 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis RepID=B4KDW5_DROMO Length = 1176 Score = 75.5 bits (184), Expect = 2e-12 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ AI+T+ IT GL +L++GNW ++ R GV+QVL+RL+F + + + R+ S Sbjct: 430 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 489 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGMLCPA+TP Sbjct: 490 IGRDGKLAKPRQLHNTLWGMLCPAETP 516 [232][TOP] >UniRef100_B4K015 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi RepID=B4K015_DROGR Length = 1175 Score = 75.5 bits (184), Expect = 2e-12 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ AI+T+ IT GL +L++GNW ++ R GV+QVL+RL+F + + + R+ S Sbjct: 429 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 488 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGMLCPA+TP Sbjct: 489 IGRDGKLAKPRQLHNTLWGMLCPAETP 515 [233][TOP] >UniRef100_Q298X6 DNA-directed RNA polymerase n=2 Tax=pseudoobscura subgroup RepID=Q298X6_DROPS Length = 1176 Score = 75.5 bits (184), Expect = 2e-12 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ AI+T+ IT GL +L++GNW ++ R GV+QVL+RL+F + + + R+ S Sbjct: 430 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 489 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGMLCPA+TP Sbjct: 490 IGRDGKLAKPRQLHNTLWGMLCPAETP 516 [234][TOP] >UniRef100_B3P0M0 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta RepID=B3P0M0_DROER Length = 1176 Score = 75.5 bits (184), Expect = 2e-12 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ AI+T+ IT GL +L++GNW ++ R GV+QVL+RL+F + + + R+ S Sbjct: 430 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 489 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGMLCPA+TP Sbjct: 490 IGRDGKLAKPRQLHNTLWGMLCPAETP 516 [235][TOP] >UniRef100_B3LYR3 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae RepID=B3LYR3_DROAN Length = 1176 Score = 75.5 bits (184), Expect = 2e-12 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ AI+T+ IT GL +L++GNW ++ R GV+QVL+RL+F + + + R+ S Sbjct: 430 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 489 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGMLCPA+TP Sbjct: 490 IGRDGKLAKPRQLHNTLWGMLCPAETP 516 [236][TOP] >UniRef100_B0EG45 DNA-directed RNA polymerase n=1 Tax=Entamoeba dispar SAW760 RepID=B0EG45_ENTDI Length = 1170 Score = 75.5 bits (184), Expect = 2e-12 Identities = 37/85 (43%), Positives = 51/85 (60%) Frame = +1 Query: 10 DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189 + AK + TIT AL +GNW + R GV QVLSRL+F +A+ + +++S E Sbjct: 421 EYAKPLSFPTITSDFTKALGTGNWPQPGGKESRHGVAQVLSRLTFTSALAYLRKISSPVE 480 Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264 RK PR LH +QWG +CPA+TP Sbjct: 481 GKRKTQKPRQLHNTQWGYICPAETP 505 [237][TOP] >UniRef100_Q6RYG2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ustilago maydis RepID=Q6RYG2_USTMA Length = 887 Score = 75.5 bits (184), Expect = 2e-12 Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTS 180 +F + A+++ TIT GL +L++GNW ++ M+ K GV+QVL+R +F + + + R + Sbjct: 236 EFHIQAAVKSSTITNGLRYSLATGNWGDQKKAMQAKAGVSQVLNRFAFASTLSHLRRTNT 295 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 296 PIGRDGKIAKPRQLHNTHWGMVCPAETP 323 [238][TOP] >UniRef100_Q5RLZ8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tilletiaria anomala RepID=Q5RLZ8_9BASI Length = 605 Score = 75.5 bits (184), Expect = 2e-12 Identities = 33/87 (37%), Positives = 58/87 (66%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F +++A++ TIT GL+ ++++GNW ++F R GV+QVL+R +F + + + R + Sbjct: 40 FHISQAVKAATITNGLKYSIATGNWGDQKKFMQARAGVSQVLNRYTFASTLSHLRRCNTP 99 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 100 IGRDGKIAKPRQLHNTHWGMVCPAETP 126 [239][TOP] >UniRef100_Q308L3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cintractia sorghi-vulgaris RepID=Q308L3_9BASI Length = 676 Score = 75.5 bits (184), Expect = 2e-12 Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTS 180 +F + A+++ TIT GL +L++GNW ++ M+ K GV+QVL+R +F + + + R + Sbjct: 39 EFHIQAAVKSSTITNGLRYSLATGNWGDQKKAMQAKAGVSQVLNRFAFASTLSHLRRTNT 98 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 99 PIGRDGKIAKPRQLHNTHWGMVCPAETP 126 [240][TOP] >UniRef100_Q2I5U1 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Spizellomyces punctatus RepID=Q2I5U1_SPIPN Length = 721 Score = 75.5 bits (184), Expect = 2e-12 Identities = 34/88 (38%), Positives = 59/88 (67%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 +F++ AI+ TIT GL+ +L++GNW ++F R GV+QVL+R ++ + + + R+ + Sbjct: 39 EFNLTMAIKGGTITRGLQYSLATGNWGDQKKFMQARAGVSQVLNRYTYASTLSHLRRLNT 98 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 99 PIGRDGKLAKPRQLHNTHWGMVCPAETP 126 [241][TOP] >UniRef100_Q0PIL9 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Moesziomyces bullatus RepID=Q0PIL9_9BASI Length = 355 Score = 75.5 bits (184), Expect = 2e-12 Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTS 180 +F + A+++ TIT GL +L++GNW ++ M+ K GV+QVL+R +F + + + R + Sbjct: 40 EFHIQAAVKSSTITNGLRYSLATGNWGDQKKAMQAKAGVSQVLNRFAFASTLSHLRRTNT 99 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 100 PIGRDGKIAKPRQLHNTHWGMVCPAETP 127 [242][TOP] >UniRef100_Q0MX48 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Sakaguchia dacryoidea RepID=Q0MX48_9BASI Length = 362 Score = 75.5 bits (184), Expect = 2e-12 Identities = 36/87 (41%), Positives = 58/87 (66%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTSQ 183 F + AI+ +TIT GL+ +L++GNW ++ M+ K GV+QVL+R +F + + + R + Sbjct: 47 FHLENAIKPNTITNGLKYSLATGNWGDQKKAMQAKAGVSQVLNRYTFASTLSHLRRCNTP 106 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH S WGM+CPA+TP Sbjct: 107 IGRDGKIAKPRQLHNSHWGMVCPAETP 133 [243][TOP] >UniRef100_Q0MX40 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sporisorium reilianum RepID=Q0MX40_9BASI Length = 608 Score = 75.5 bits (184), Expect = 2e-12 Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTS 180 +F + A+++ TIT GL +L++GNW ++ M+ K GV+QVL+R +F + + + R + Sbjct: 43 EFHIQAAVKSSTITNGLRYSLATGNWGDQKKAMQAKAGVSQVLNRFAFASTLSHLRRTNT 102 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 103 PIGRDGKIAKPRQLHNTHWGMVCPAETP 130 [244][TOP] >UniRef100_Q0MTB7 RNA polymerase II second largest subunit (Fragment) n=1 Tax=Ustanciosporium standleyanum RepID=Q0MTB7_9BASI Length = 358 Score = 75.5 bits (184), Expect = 2e-12 Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTS 180 +F + A+++ TIT GL +L++GNW ++ M+ K GV+QVL+R +F + + + R + Sbjct: 46 EFHIQAAVKSSTITNGLRYSLATGNWGDQKKAMQAKAGVSQVLNRFAFASTLSHLRRTNT 105 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 106 PIGRDGKIAKPRQLHNTHWGMVCPAETP 133 [245][TOP] >UniRef100_Q0MTB4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ustilago tritici RepID=Q0MTB4_9BASI Length = 635 Score = 75.5 bits (184), Expect = 2e-12 Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTS 180 +F + A+++ TIT GL +L++GNW ++ M+ K GV+QVL+R +F + + + R + Sbjct: 43 EFHIQAAVKSSTITNGLRYSLATGNWGDQKKAMQAKAGVSQVLNRFAFASTLSHLRRTNT 102 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 103 PIGRDGKIAKPRQLHNTHWGMVCPAETP 130 [246][TOP] >UniRef100_A1YIE2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis macrandra RepID=A1YIE2_9FUNG Length = 879 Score = 75.5 bits (184), Expect = 2e-12 Identities = 35/88 (39%), Positives = 59/88 (67%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTS 180 +F++ A++ IT GL+ +L++GNW +R M+ R GV+QVLSR ++ + + + R+ S Sbjct: 236 EFNMVSAVQHQIITRGLQFSLATGNWGDQRKMMQTRAGVSQVLSRYTYASTLSHLRRLNS 295 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 296 PIGREGKLAKPRQLHNTHWGMVCPAETP 323 [247][TOP] >UniRef100_A1YID9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Entophlyctis confervae-glomeratae RepID=A1YID9_9FUNG Length = 886 Score = 75.5 bits (184), Expect = 2e-12 Identities = 33/88 (37%), Positives = 61/88 (69%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180 +F++A A+++ TIT GL+ +L++GNW ++F + GV+QVL+R ++ + + + R+ + Sbjct: 237 EFNLAMALKSATITKGLQYSLATGNWGDQKKFMSAKAGVSQVLNRYTYASTLSHLRRLNT 296 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGM+CPA+TP Sbjct: 297 PIGRDGKLAKPRQLHNTHWGMVCPAETP 324 [248][TOP] >UniRef100_A1YIC9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Furculomyces boomerangus RepID=A1YIC9_9FUNG Length = 906 Score = 75.5 bits (184), Expect = 2e-12 Identities = 34/88 (38%), Positives = 61/88 (69%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTS 180 +F++ AI+++TIT GL+ +L++GNW ++ M+ R GV+QVL+R +F + + + R + Sbjct: 235 EFNLTMAIKSNTITAGLKYSLATGNWGDQKKSMQSRTGVSQVLNRYTFASTLSHLRRCNT 294 Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WG++CPA+TP Sbjct: 295 PIGRDGKIAKPRQLHNTHWGLVCPAETP 322 [249][TOP] >UniRef100_P08266 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=melanogaster subgroup RepID=RPB2_DROME Length = 1176 Score = 75.5 bits (184), Expect = 2e-12 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F++ AI+T+ IT GL +L++GNW ++ R GV+QVL+RL+F + + + R+ S Sbjct: 430 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 489 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH + WGMLCPA+TP Sbjct: 490 IGRDGKLAKPRQLHNTLWGMLCPAETP 516 [250][TOP] >UniRef100_UPI0000221AC5 hypothetical protein CBG18197 n=1 Tax=Caenorhabditis briggsae AF16 RepID=UPI0000221AC5 Length = 1194 Score = 75.1 bits (183), Expect = 2e-12 Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 1/87 (1%) Frame = +1 Query: 7 FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183 F + ++T TIT GL +L++GNW ++ R GV+QVL+RL++ A + + R S Sbjct: 436 FALDVCVKTSTITRGLAYSLATGNWGDQKKAHQSRAGVSQVLNRLTYTATLSHLRRANSP 495 Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264 + K++ PR LH +QWGM+CPA+TP Sbjct: 496 IGREGKLAKPRQLHNTQWGMVCPAETP 522