AV639710 ( HCL003e05_r )

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[1][TOP]
>UniRef100_A8IY03 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
           RepID=A8IY03_CHLRE
          Length = 1161

 Score =  177 bits (448), Expect = 4e-43
 Identities = 87/87 (100%), Positives = 87/87 (100%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ
Sbjct: 413 QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 472

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
           FEKTRKVSGPRALHPSQWGMLCPADTP
Sbjct: 473 FEKTRKVSGPRALHPSQWGMLCPADTP 499

[2][TOP]
>UniRef100_Q01FH9 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
           RepID=Q01FH9_OSTTA
          Length = 2569

 Score =  150 bits (380), Expect = 3e-35
 Identities = 70/87 (80%), Positives = 80/87 (91%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           QFD+ K IR DT++ GLE A+SSGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQ
Sbjct: 439 QFDILKCIRQDTLSNGLEHAISSGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQ 498

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
           FEKTRKVSGPRAL PSQWGMLCP+DTP
Sbjct: 499 FEKTRKVSGPRALQPSQWGMLCPSDTP 525

[3][TOP]
>UniRef100_C1N4K3 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N4K3_9CHLO
          Length = 1197

 Score =  150 bits (380), Expect = 3e-35
 Identities = 70/87 (80%), Positives = 80/87 (91%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           QFD+ K IR DT++ GLE A+SSGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQ
Sbjct: 461 QFDIIKCIRQDTLSNGLEHAISSGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQ 520

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
           FEKTRKVSGPRAL PSQWGMLCP+DTP
Sbjct: 521 FEKTRKVSGPRALQPSQWGMLCPSDTP 547

[4][TOP]
>UniRef100_C1FIF0 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
           RepID=C1FIF0_9CHLO
          Length = 1159

 Score =  150 bits (380), Expect = 3e-35
 Identities = 70/87 (80%), Positives = 80/87 (91%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           QFD+ K IR DT++ GLE A+SSGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQ
Sbjct: 423 QFDIIKCIRQDTLSNGLEHAISSGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQ 482

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
           FEKTRKVSGPRAL PSQWGMLCP+DTP
Sbjct: 483 FEKTRKVSGPRALQPSQWGMLCPSDTP 509

[5][TOP]
>UniRef100_A4RS40 DNA-directed RNA polymerase n=1 Tax=Ostreococcus lucimarinus
           CCE9901 RepID=A4RS40_OSTLU
          Length = 1146

 Score =  150 bits (380), Expect = 3e-35
 Identities = 70/87 (80%), Positives = 80/87 (91%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           QFD+ K IR DT++ GLE A+SSGNW ++RFRMERKGVTQVLSRLSFI+A+GMMTR+TSQ
Sbjct: 409 QFDILKCIRQDTLSNGLEHAISSGNWTVKRFRMERKGVTQVLSRLSFISALGMMTRITSQ 468

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
           FEKTRKVSGPRAL PSQWGMLCP+DTP
Sbjct: 469 FEKTRKVSGPRALQPSQWGMLCPSDTP 495

[6][TOP]
>UniRef100_A9RNX6 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
           patens RepID=A9RNX6_PHYPA
          Length = 1135

 Score =  145 bits (365), Expect = 2e-33
 Identities = 67/87 (77%), Positives = 78/87 (89%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           QFD+ K IR DT+T GLE A+SSGNW ++RF+M+RKGVTQV+SRLSFIAA+G MTR++SQ
Sbjct: 386 QFDIIKLIRPDTLTNGLEHAISSGNWAVKRFKMDRKGVTQVVSRLSFIAALGHMTRISSQ 445

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
           FEKTRKVSGPRAL PSQWGMLCP DTP
Sbjct: 446 FEKTRKVSGPRALQPSQWGMLCPCDTP 472

[7][TOP]
>UniRef100_B8BQM2 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana
           CCMP1335 RepID=B8BQM2_THAPS
          Length = 1108

 Score =  144 bits (364), Expect = 2e-33
 Identities = 66/86 (76%), Positives = 78/86 (90%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186
           FDV K IR D+I YG+ SA+SSGNW+++RFRM+R GVTQVLSRLS+I+A+GMMTR+ SQF
Sbjct: 367 FDVIKTIRPDSIAYGMMSAISSGNWVLKRFRMDRAGVTQVLSRLSYISALGMMTRVNSQF 426

Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264
           EKTRKVSGPR+L PSQWGMLCPADTP
Sbjct: 427 EKTRKVSGPRSLQPSQWGMLCPADTP 452

[8][TOP]
>UniRef100_B4LKV4 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
           RepID=B4LKV4_DROVI
          Length = 1137

 Score =  143 bits (361), Expect = 5e-33
 Identities = 68/88 (77%), Positives = 78/88 (88%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R   IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S
Sbjct: 405 AQFDVVKHMRAAQITVGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492

[9][TOP]
>UniRef100_B4J5G6 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
           RepID=B4J5G6_DROGR
          Length = 1137

 Score =  143 bits (361), Expect = 5e-33
 Identities = 68/88 (77%), Positives = 78/88 (88%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R   IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S
Sbjct: 405 AQFDVVKHMRAAQITVGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492

[10][TOP]
>UniRef100_Q28ZV6 DNA-directed RNA polymerase n=1 Tax=Drosophila pseudoobscura
           pseudoobscura RepID=Q28ZV6_DROPS
          Length = 1137

 Score =  143 bits (360), Expect = 7e-33
 Identities = 68/88 (77%), Positives = 78/88 (88%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R   IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S
Sbjct: 405 AQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492

[11][TOP]
>UniRef100_B4P5Q3 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
           RepID=B4P5Q3_DROYA
          Length = 1137

 Score =  143 bits (360), Expect = 7e-33
 Identities = 68/88 (77%), Positives = 78/88 (88%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R   IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S
Sbjct: 405 AQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492

[12][TOP]
>UniRef100_B4KPU7 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
           RepID=B4KPU7_DROMO
          Length = 1136

 Score =  143 bits (360), Expect = 7e-33
 Identities = 68/88 (77%), Positives = 78/88 (88%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R   IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S
Sbjct: 405 AQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492

[13][TOP]
>UniRef100_B4QC69 DNA-directed RNA polymerase n=2 Tax=melanogaster subgroup
           RepID=B4QC69_DROSI
          Length = 1137

 Score =  143 bits (360), Expect = 7e-33
 Identities = 68/88 (77%), Positives = 78/88 (88%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R   IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S
Sbjct: 405 AQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492

[14][TOP]
>UniRef100_B4GGQ4 DNA-directed RNA polymerase n=1 Tax=Drosophila persimilis
           RepID=B4GGQ4_DROPE
          Length = 1137

 Score =  143 bits (360), Expect = 7e-33
 Identities = 68/88 (77%), Positives = 78/88 (88%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R   IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S
Sbjct: 405 AQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492

[15][TOP]
>UniRef100_B3NS93 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
           RepID=B3NS93_DROER
          Length = 1137

 Score =  143 bits (360), Expect = 7e-33
 Identities = 68/88 (77%), Positives = 78/88 (88%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R   IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S
Sbjct: 405 AQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492

[16][TOP]
>UniRef100_B3MH37 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
           RepID=B3MH37_DROAN
          Length = 1137

 Score =  143 bits (360), Expect = 7e-33
 Identities = 68/88 (77%), Positives = 78/88 (88%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R   IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S
Sbjct: 405 AQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492

[17][TOP]
>UniRef100_P25167 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Drosophila
           melanogaster RepID=RPC2_DROME
          Length = 1137

 Score =  143 bits (360), Expect = 7e-33
 Identities = 68/88 (77%), Positives = 78/88 (88%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R   IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S
Sbjct: 405 AQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 464

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 465 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 492

[18][TOP]
>UniRef100_UPI00015B53C8 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
           polypeptide B n=1 Tax=Nasonia vitripennis
           RepID=UPI00015B53C8
          Length = 1127

 Score =  141 bits (355), Expect = 3e-32
 Identities = 66/88 (75%), Positives = 78/88 (88%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFD+ K +R D+IT GL  A+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S
Sbjct: 393 AQFDIVKHMRHDSITNGLAVAISSGNWTIKRFKMERHGVTQVLSRLSYISALGMMTRVNS 452

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 453 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 480

[19][TOP]
>UniRef100_UPI00004DA04E DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
           polymerase III subunit C2) (DNA-directed RNA polymerase
           III subunit B) (DNA-directed RNA polymerase III 127.6
           kDa polypeptide) (C128). n=1 Tax=Xenopus (Silurana)
           tropicalis RepID=UPI00004DA04E
          Length = 1136

 Score =  141 bits (355), Expect = 3e-32
 Identities = 65/88 (73%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+SSGNW ++RF+M+R+GVTQVLSRLS+IAA+GMMTR++S
Sbjct: 401 AQFDVVKHMRQDQITNGMVNAISSGNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISS 460

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 461 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 488

[20][TOP]
>UniRef100_B2GUR3 DNA-directed RNA polymerase n=1 Tax=Xenopus (Silurana) tropicalis
           RepID=B2GUR3_XENTR
          Length = 1134

 Score =  141 bits (355), Expect = 3e-32
 Identities = 65/88 (73%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+SSGNW ++RF+M+R+GVTQVLSRLS+IAA+GMMTR++S
Sbjct: 399 AQFDVVKHMRQDQITNGMVNAISSGNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISS 458

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 459 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 486

[21][TOP]
>UniRef100_B4MR22 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
           RepID=B4MR22_DROWI
          Length = 999

 Score =  141 bits (355), Expect = 3e-32
 Identities = 67/88 (76%), Positives = 78/88 (88%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R   IT GLESA+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S
Sbjct: 267 AQFDVVKHMRAAQITAGLESAISSGNWTIKRFKMERGGVTQVLSRLSYISALGMMTRVNS 326

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEK+RKVSGPR+L PSQWGMLCP+DTP
Sbjct: 327 QFEKSRKVSGPRSLQPSQWGMLCPSDTP 354

[22][TOP]
>UniRef100_UPI000051A146 PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6
           kDa polypeptide (RNA polymerase III subunit 2) (RPC2)
           isoform 1 n=1 Tax=Apis mellifera RepID=UPI000051A146
          Length = 1134

 Score =  140 bits (354), Expect = 3e-32
 Identities = 66/88 (75%), Positives = 77/88 (87%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFD+ K +R D IT GL  A+SSGNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S
Sbjct: 399 AQFDIVKHMRQDQITNGLAFAISSGNWTIKRFKMERHGVTQVLSRLSYISALGMMTRVNS 458

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 459 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 486

[23][TOP]
>UniRef100_Q7Q416 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anopheles gambiae
           RepID=Q7Q416_ANOGA
          Length = 1089

 Score =  140 bits (353), Expect = 4e-32
 Identities = 66/88 (75%), Positives = 78/88 (88%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R   IT GLE+A+S+GNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S
Sbjct: 393 AQFDVGKHMREALITAGLETAISTGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 452

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 453 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 480

[24][TOP]
>UniRef100_C3YYC3 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
           RepID=C3YYC3_BRAFL
          Length = 1137

 Score =  140 bits (353), Expect = 4e-32
 Identities = 64/88 (72%), Positives = 79/88 (89%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFD+ K +R D IT GL +A+S+GNW ++RF+M+R GVTQVLSRLSFI+A+GMMTR++S
Sbjct: 388 AQFDIVKHMRQDQITNGLVNAISTGNWTVKRFKMDRAGVTQVLSRLSFISALGMMTRISS 447

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 448 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 475

[25][TOP]
>UniRef100_UPI000180BF5A PREDICTED: similar to polymerase (RNA) III (DNA directed)
           polypeptide B n=1 Tax=Ciona intestinalis
           RepID=UPI000180BF5A
          Length = 1141

 Score =  140 bits (352), Expect = 6e-32
 Identities = 65/88 (73%), Positives = 78/88 (88%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV + +R D IT  L  A+SSGNWI++RF+MERKGVTQVL+RLS+I+A+GMMTR+ S
Sbjct: 400 AQFDVVRHMRQDLITTSLVIAISSGNWIVKRFKMERKGVTQVLTRLSYISALGMMTRIAS 459

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 460 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 487

[26][TOP]
>UniRef100_UPI00017B31AA UPI00017B31AA related cluster n=1 Tax=Tetraodon nigroviridis
           RepID=UPI00017B31AA
          Length = 1153

 Score =  140 bits (352), Expect = 6e-32
 Identities = 64/88 (72%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++S
Sbjct: 421 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISS 480

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 481 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 508

[27][TOP]
>UniRef100_UPI00017B31A9 UPI00017B31A9 related cluster n=1 Tax=Tetraodon nigroviridis
           RepID=UPI00017B31A9
          Length = 1132

 Score =  140 bits (352), Expect = 6e-32
 Identities = 64/88 (72%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++S
Sbjct: 397 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISS 456

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 457 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 484

[28][TOP]
>UniRef100_UPI00016E4F57 UPI00016E4F57 related cluster n=1 Tax=Takifugu rubripes
           RepID=UPI00016E4F57
          Length = 1132

 Score =  140 bits (352), Expect = 6e-32
 Identities = 64/88 (72%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++S
Sbjct: 397 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISS 456

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 457 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 484

[29][TOP]
>UniRef100_Q4S7G7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tetraodon
           nigroviridis RepID=Q4S7G7_TETNG
          Length = 1171

 Score =  140 bits (352), Expect = 6e-32
 Identities = 64/88 (72%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++S
Sbjct: 426 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISS 485

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 486 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 513

[30][TOP]
>UniRef100_A2BG99 DNA-directed RNA polymerase n=1 Tax=Danio rerio RepID=A2BG99_DANRE
          Length = 1130

 Score =  140 bits (352), Expect = 6e-32
 Identities = 64/88 (72%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++S
Sbjct: 395 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISS 454

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 455 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 482

[31][TOP]
>UniRef100_B7FVD4 DNA-directed RNA polymerase n=1 Tax=Phaeodactylum tricornutum CCAP
           1055/1 RepID=B7FVD4_PHATR
          Length = 1211

 Score =  140 bits (352), Expect = 6e-32
 Identities = 63/86 (73%), Positives = 78/86 (90%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186
           FDV K IR DTIT G+ +A+++GNW+++RFRM+R GVTQVLSRLS+++A+GMMTR+ SQF
Sbjct: 449 FDVVKTIRPDTITNGMINAIATGNWVLKRFRMDRAGVTQVLSRLSYMSALGMMTRINSQF 508

Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264
           EKTRKVSGPR+L PSQWGMLCPADTP
Sbjct: 509 EKTRKVSGPRSLQPSQWGMLCPADTP 534

[32][TOP]
>UniRef100_C0PUS9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Salmo salar
           RepID=C0PUS9_SALSA
          Length = 814

 Score =  139 bits (351), Expect = 8e-32
 Identities = 63/88 (71%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFD+ K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++S
Sbjct: 79  AQFDIVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISS 138

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 139 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 166

[33][TOP]
>UniRef100_UPI000194E18E PREDICTED: hypothetical protein n=1 Tax=Taeniopygia guttata
           RepID=UPI000194E18E
          Length = 1280

 Score =  139 bits (349), Expect = 1e-31
 Identities = 63/88 (71%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S
Sbjct: 545 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 604

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 605 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 632

[34][TOP]
>UniRef100_UPI0001560749 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
           (RNA polymerase III subunit C2) (DNA-directed RNA
           polymerase III subunit B) (DNA-directed RNA polymerase
           III 127.6 kDa polypeptide) (C128) n=1 Tax=Equus caballus
           RepID=UPI0001560749
          Length = 1133

 Score =  139 bits (349), Expect = 1e-31
 Identities = 63/88 (71%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S
Sbjct: 398 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 457

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485

[35][TOP]
>UniRef100_UPI000155CB1A PREDICTED: similar to Polymerase (RNA) III (DNA directed)
           polypeptide B n=1 Tax=Ornithorhynchus anatinus
           RepID=UPI000155CB1A
          Length = 1113

 Score =  139 bits (349), Expect = 1e-31
 Identities = 63/88 (71%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S
Sbjct: 378 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 437

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 438 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 465

[36][TOP]
>UniRef100_UPI0000E7F911 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
           polypeptide B n=1 Tax=Gallus gallus RepID=UPI0000E7F911
          Length = 1126

 Score =  139 bits (349), Expect = 1e-31
 Identities = 63/88 (71%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S
Sbjct: 391 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 450

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 451 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 478

[37][TOP]
>UniRef100_UPI0000E23379 PREDICTED: polymerase (RNA) III (DNA directed) polypeptide B
           isoform 2 n=1 Tax=Pan troglodytes RepID=UPI0000E23379
          Length = 1133

 Score =  139 bits (349), Expect = 1e-31
 Identities = 63/88 (71%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S
Sbjct: 398 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 457

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485

[38][TOP]
>UniRef100_UPI0000503D79 polymerase (RNA) III (DNA directed) polypeptide B n=2 Tax=Rattus
           norvegicus RepID=UPI0000503D79
          Length = 1133

 Score =  139 bits (349), Expect = 1e-31
 Identities = 63/88 (71%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S
Sbjct: 398 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 457

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485

[39][TOP]
>UniRef100_UPI00005EAC23 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
           polypeptide B n=1 Tax=Monodelphis domestica
           RepID=UPI00005EAC23
          Length = 1133

 Score =  139 bits (349), Expect = 1e-31
 Identities = 63/88 (71%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S
Sbjct: 398 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 457

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485

[40][TOP]
>UniRef100_UPI00005A223E PREDICTED: similar to DNA-directed RNA polymerase III subunit 127.6
           kDa polypeptide (RNA polymerase III subunit 2) (RPC2)
           n=1 Tax=Canis lupus familiaris RepID=UPI00005A223E
          Length = 1133

 Score =  139 bits (349), Expect = 1e-31
 Identities = 63/88 (71%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S
Sbjct: 398 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 457

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485

[41][TOP]
>UniRef100_UPI000179EFE0 UPI000179EFE0 related cluster n=1 Tax=Bos taurus
           RepID=UPI000179EFE0
          Length = 796

 Score =  139 bits (349), Expect = 1e-31
 Identities = 63/88 (71%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S
Sbjct: 61  AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 120

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 121 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 148

[42][TOP]
>UniRef100_UPI0000F339C2 PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
           (RNA polymerase III subunit C2) (DNA-directed RNA
           polymerase III subunit B) (DNA-directed RNA polymerase
           III 127.6 kDa polypeptide) (C128) n=1 Tax=Bos taurus
           RepID=UPI0000F339C2
          Length = 1133

 Score =  139 bits (349), Expect = 1e-31
 Identities = 63/88 (71%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S
Sbjct: 398 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 457

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485

[43][TOP]
>UniRef100_UPI0000ECD29F DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
           polymerase III subunit C2) (DNA-directed RNA polymerase
           III subunit B) (DNA-directed RNA polymerase III 127.6
           kDa polypeptide) (C128). n=1 Tax=Gallus gallus
           RepID=UPI0000ECD29F
          Length = 1132

 Score =  139 bits (349), Expect = 1e-31
 Identities = 63/88 (71%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S
Sbjct: 397 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 456

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 457 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 484

[44][TOP]
>UniRef100_B0WCT6 Putative uncharacterized protein n=1 Tax=Culex quinquefasciatus
           RepID=B0WCT6_CULQU
          Length = 928

 Score =  139 bits (349), Expect = 1e-31
 Identities = 64/88 (72%), Positives = 78/88 (88%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFD+ K +R   I+ GLE+A+S+GNW I+RF+MER GVTQVLSRLS+I+A+GMMTR+ S
Sbjct: 398 AQFDIVKHMRAALISTGLETAISTGNWTIKRFKMERAGVTQVLSRLSYISALGMMTRVNS 457

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485

[45][TOP]
>UniRef100_Q7Z3R8 DNA-directed RNA polymerase n=2 Tax=Homininae RepID=Q7Z3R8_HUMAN
          Length = 1133

 Score =  139 bits (349), Expect = 1e-31
 Identities = 63/88 (71%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S
Sbjct: 398 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 457

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485

[46][TOP]
>UniRef100_B3KV73 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KV73_HUMAN
          Length = 1075

 Score =  139 bits (349), Expect = 1e-31
 Identities = 63/88 (71%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S
Sbjct: 340 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 399

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 400 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 427

[47][TOP]
>UniRef100_B3KRQ8 DNA-directed RNA polymerase n=1 Tax=Homo sapiens RepID=B3KRQ8_HUMAN
          Length = 838

 Score =  139 bits (349), Expect = 1e-31
 Identities = 63/88 (71%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S
Sbjct: 103 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 162

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 163 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 190

[48][TOP]
>UniRef100_P59470 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Mus musculus
           RepID=RPC2_MOUSE
          Length = 1133

 Score =  139 bits (349), Expect = 1e-31
 Identities = 63/88 (71%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S
Sbjct: 398 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 457

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485

[49][TOP]
>UniRef100_Q9NW08 DNA-directed RNA polymerase III subunit RPC2 n=2 Tax=Homo sapiens
           RepID=RPC2_HUMAN
          Length = 1133

 Score =  139 bits (349), Expect = 1e-31
 Identities = 63/88 (71%), Positives = 80/88 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLS+I+A+GMMTR++S
Sbjct: 398 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISS 457

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 458 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 485

[50][TOP]
>UniRef100_UPI0000E487B4 PREDICTED: similar to Polymerase (RNA) III (DNA directed)
           polypeptide B n=1 Tax=Strongylocentrotus purpuratus
           RepID=UPI0000E487B4
          Length = 830

 Score =  138 bits (347), Expect = 2e-31
 Identities = 63/88 (71%), Positives = 78/88 (88%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFD+ K +R D IT GL +A+S+GNW ++RF+MER GVTQVLSRLS+I+ +GMMTR++S
Sbjct: 415 AQFDIVKYMRQDQITNGLITAISTGNWSVKRFKMERAGVTQVLSRLSYISCLGMMTRISS 474

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 475 QFEKTRKVSGPRSLQPSQWGMLCPSDTP 502

[51][TOP]
>UniRef100_A9V2W9 DNA-directed RNA polymerase n=1 Tax=Monosiga brevicollis
           RepID=A9V2W9_MONBE
          Length = 1097

 Score =  138 bits (347), Expect = 2e-31
 Identities = 65/88 (73%), Positives = 75/88 (85%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           A FD    +R D IT  L +A+SSGNWI++RF+MER GVT VLSRLSFIA++GMMTR+TS
Sbjct: 379 AAFDATNFMREDIITNSLRNAISSGNWILKRFKMERHGVTSVLSRLSFIASLGMMTRITS 438

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPR+L PSQWGMLCPADTP
Sbjct: 439 QFEKTRKVSGPRSLQPSQWGMLCPADTP 466

[52][TOP]
>UniRef100_UPI0000D56081 PREDICTED: similar to RNA polymerase III 128kD subunit CG8344-PA
           n=1 Tax=Tribolium castaneum RepID=UPI0000D56081
          Length = 1122

 Score =  136 bits (342), Expect = 8e-31
 Identities = 65/87 (74%), Positives = 76/87 (87%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           QFDV K +R+D IT  L  A+S+GNW I+RFRMER GVTQVLSRLS+I+A+GMMTR+ SQ
Sbjct: 391 QFDVVKYMRSDLITNCLVYAISTGNWTIKRFRMERLGVTQVLSRLSYISALGMMTRVNSQ 450

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
           FEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 451 FEKTRKVSGPRSLQPSQWGMLCPSDTP 477

[53][TOP]
>UniRef100_B7Q0E7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ixodes scapularis
           RepID=B7Q0E7_IXOSC
          Length = 1141

 Score =  134 bits (336), Expect = 4e-30
 Identities = 62/87 (71%), Positives = 77/87 (88%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           QFDV K +R D IT GL S++S+GNW ++RF+MER GVTQVL+RLS+I+A+GMMTR+ SQ
Sbjct: 408 QFDVVKYVRQDLITNGLVSSISTGNWTVKRFKMERIGVTQVLTRLSYISALGMMTRVNSQ 467

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
           FEKTRKVSGPR+L PSQ+GMLCP+DTP
Sbjct: 468 FEKTRKVSGPRSLQPSQFGMLCPSDTP 494

[54][TOP]
>UniRef100_UPI000186CFA7 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide,
           putative n=1 Tax=Pediculus humanus corporis
           RepID=UPI000186CFA7
          Length = 1137

 Score =  133 bits (335), Expect = 5e-30
 Identities = 61/88 (69%), Positives = 74/88 (84%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFD+ K +R D IT G  +A+S+GNW I+RFRM  +GVTQVLSRLS+I+A GMMTR+ S
Sbjct: 403 AQFDIVKHLRQDFITNGFSNAISTGNWTIKRFRMHTQGVTQVLSRLSYISAFGMMTRVNS 462

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
            FEKTRKVSGPR+LH +QWGMLCP+DTP
Sbjct: 463 HFEKTRKVSGPRSLHATQWGMLCPSDTP 490

[55][TOP]
>UniRef100_Q54IZ9 Ddi rpc2 intein n=1 Tax=Dictyostelium discoideum RepID=RPC2_DICDI
          Length = 1608

 Score =  133 bits (334), Expect = 7e-30
 Identities = 62/85 (72%), Positives = 73/85 (85%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           D+ K IRTDTIT G   A+SSG W ++RFRMER GV+QVLSRLS+I+ MGMMTR+ SQFE
Sbjct: 417 DLPKLIRTDTITNGFTHAISSGQWNLKRFRMERSGVSQVLSRLSYISCMGMMTRIQSQFE 476

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           KTRKV+GPR+L PSQWGMLCP+DTP
Sbjct: 477 KTRKVAGPRSLQPSQWGMLCPSDTP 501

[56][TOP]
>UniRef100_Q27492 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis elegans
           RepID=Q27492_CAEEL
          Length = 1154

 Score =  132 bits (332), Expect = 1e-29
 Identities = 62/88 (70%), Positives = 75/88 (85%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           A  D+ K +R D IT  + +A+S+GNWII+RFRMER GVTQVLSRLS+I+A+GMMTR+ S
Sbjct: 411 APLDIVKHMRQDMITNTIVNAMSTGNWIIKRFRMERLGVTQVLSRLSYISALGMMTRINS 470

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
            FEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 471 TFEKTRKVSGPRSLQPSQWGMLCPSDTP 498

[57][TOP]
>UniRef100_B6VBN7 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis brenneri
           RepID=B6VBN7_CAEBE
          Length = 1152

 Score =  132 bits (332), Expect = 1e-29
 Identities = 62/88 (70%), Positives = 75/88 (85%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           A  D+ K +R D IT  + +A+S+GNWII+RFRMER GVTQVLSRLS+I+A+GMMTR+ S
Sbjct: 410 APLDIVKHMRQDMITNTIVNAMSTGNWIIKRFRMERLGVTQVLSRLSYISALGMMTRINS 469

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
            FEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 470 TFEKTRKVSGPRSLQPSQWGMLCPSDTP 497

[58][TOP]
>UniRef100_B3S5S8 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
           RepID=B3S5S8_TRIAD
          Length = 1016

 Score =  132 bits (332), Expect = 1e-29
 Identities = 59/87 (67%), Positives = 76/87 (87%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           +FD+ K +R D IT G   AL++GNW I+R++M+R GVTQVLSRLS+++A+GMMTR++SQ
Sbjct: 300 EFDIVKYMRQDQITNGFNLALTTGNWSIKRYKMDRAGVTQVLSRLSYLSALGMMTRISSQ 359

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
           FEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 360 FEKTRKVSGPRSLQPSQWGMLCPSDTP 386

[59][TOP]
>UniRef100_A8WJV6 DNA-directed RNA polymerase n=1 Tax=Caenorhabditis briggsae AF16
           RepID=A8WJV6_CAEBR
          Length = 1160

 Score =  132 bits (332), Expect = 1e-29
 Identities = 62/88 (70%), Positives = 75/88 (85%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           A  D+ K +R D IT  + +A+S+GNWII+RFRMER GVTQVLSRLS+I+A+GMMTR+ S
Sbjct: 396 APLDIVKHMRQDMITNTIVNAMSTGNWIIKRFRMERLGVTQVLSRLSYISALGMMTRINS 455

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
            FEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 456 TFEKTRKVSGPRSLQPSQWGMLCPSDTP 483

[60][TOP]
>UniRef100_C5Z6F6 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
           RepID=C5Z6F6_SORBI
          Length = 1137

 Score =  132 bits (331), Expect = 2e-29
 Identities = 61/85 (71%), Positives = 72/85 (84%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           D ++ I  DTIT+GLE A+S+GNW I+RFRM RKGV+QVLSRLS++A +G MTR+T QFE
Sbjct: 391 DFSQLIMQDTITFGLERAISTGNWDIKRFRMHRKGVSQVLSRLSYMATLGYMTRITPQFE 450

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           KTRK SGPRAL PSQWGMLCP DTP
Sbjct: 451 KTRKTSGPRALQPSQWGMLCPCDTP 475

[61][TOP]
>UniRef100_C4QD48 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
           RepID=C4QD48_SCHMA
          Length = 1126

 Score =  130 bits (328), Expect = 4e-29
 Identities = 60/86 (69%), Positives = 75/86 (87%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186
           FD+++ I+T  IT  L  A+SSGNWII+RFRM R GVTQV+SRLS++AA+G MTRMTSQF
Sbjct: 377 FDISRHIKTWMITEQLNRAISSGNWIIKRFRMMRHGVTQVVSRLSYVAALGHMTRMTSQF 436

Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264
           EKTRKVSGPR++H SQWG++CP+DTP
Sbjct: 437 EKTRKVSGPRSIHASQWGLICPSDTP 462

[62][TOP]
>UniRef100_C4QD47 DNA-directed RNA polymerase n=1 Tax=Schistosoma mansoni
           RepID=C4QD47_SCHMA
          Length = 1128

 Score =  130 bits (328), Expect = 4e-29
 Identities = 60/86 (69%), Positives = 75/86 (87%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186
           FD+++ I+T  IT  L  A+SSGNWII+RFRM R GVTQV+SRLS++AA+G MTRMTSQF
Sbjct: 390 FDISRHIKTWMITEQLNRAISSGNWIIKRFRMMRHGVTQVVSRLSYVAALGHMTRMTSQF 449

Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264
           EKTRKVSGPR++H SQWG++CP+DTP
Sbjct: 450 EKTRKVSGPRSIHASQWGLICPSDTP 475

[63][TOP]
>UniRef100_UPI00017918AB PREDICTED: similar to DNA-directed RNA polymerase III subunit RPC2
           (RNA polymerase III subunit C2) (DNA-directed RNA
           polymerase III subunit B) (DNA-directed RNA polymerase
           III 127.6 kDa polypeptide) (C128) n=1 Tax=Acyrthosiphon
           pisum RepID=UPI00017918AB
          Length = 1112

 Score =  130 bits (327), Expect = 5e-29
 Identities = 61/86 (70%), Positives = 75/86 (87%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186
           FD+ K IRTDTIT  L  A+ +GNW I+RFRMER GVTQVL+RLS+++A+GMMTR+ SQF
Sbjct: 383 FDIIKYIRTDTITNALVFAIQTGNWSIKRFRMERHGVTQVLTRLSYLSAIGMMTRVNSQF 442

Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264
           EK+RKVSGPR+L PSQ+GMLCP+DTP
Sbjct: 443 EKSRKVSGPRSLQPSQFGMLCPSDTP 468

[64][TOP]
>UniRef100_B9Q403 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii VEG
           RepID=B9Q403_TOXGO
          Length = 1324

 Score =  130 bits (327), Expect = 5e-29
 Identities = 61/85 (71%), Positives = 72/85 (84%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           D  + + TD IT G+++ALS+GNW I+RFRMER GV+QVLSRLS+IA +GMMTR+ SQFE
Sbjct: 573 DCFRNLPTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLGMMTRINSQFE 632

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           K RKVSGPRAL PSQWGMLCP DTP
Sbjct: 633 KGRKVSGPRALQPSQWGMLCPCDTP 657

[65][TOP]
>UniRef100_B9PFT5 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii GT1
           RepID=B9PFT5_TOXGO
          Length = 1328

 Score =  130 bits (327), Expect = 5e-29
 Identities = 61/85 (71%), Positives = 72/85 (84%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           D  + + TD IT G+++ALS+GNW I+RFRMER GV+QVLSRLS+IA +GMMTR+ SQFE
Sbjct: 577 DCFRNLPTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLGMMTRINSQFE 636

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           K RKVSGPRAL PSQWGMLCP DTP
Sbjct: 637 KGRKVSGPRALQPSQWGMLCPCDTP 661

[66][TOP]
>UniRef100_B6KDI3 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
           RepID=B6KDI3_TOXGO
          Length = 1332

 Score =  130 bits (327), Expect = 5e-29
 Identities = 61/85 (71%), Positives = 72/85 (84%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           D  + + TD IT G+++ALS+GNW I+RFRMER GV+QVLSRLS+IA +GMMTR+ SQFE
Sbjct: 581 DCFRNLPTDIITRGMQTALSTGNWTIKRFRMERSGVSQVLSRLSYIATLGMMTRINSQFE 640

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           K RKVSGPRAL PSQWGMLCP DTP
Sbjct: 641 KGRKVSGPRALQPSQWGMLCPCDTP 665

[67][TOP]
>UniRef100_A8P4S3 DNA-directed RNA polymerase III subunit 127.6 kDa polypeptide,
           putative n=1 Tax=Brugia malayi RepID=A8P4S3_BRUMA
          Length = 1104

 Score =  130 bits (327), Expect = 5e-29
 Identities = 60/88 (68%), Positives = 73/88 (82%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           A  D+ K +R D IT  L  AL++GNW I+RF+MER+GVTQVLSRLS+I+ +GMMTR+ S
Sbjct: 392 APLDIVKHVRQDLITNALVDALATGNWTIKRFKMERQGVTQVLSRLSYISVLGMMTRINS 451

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
            FEKTRKVSGPR+L PSQWGMLCP+DTP
Sbjct: 452 TFEKTRKVSGPRSLQPSQWGMLCPSDTP 479

[68][TOP]
>UniRef100_B9IDF9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Populus trichocarpa
           RepID=B9IDF9_POPTR
          Length = 1141

 Score =  128 bits (322), Expect = 2e-28
 Identities = 60/88 (68%), Positives = 75/88 (85%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           ++FD ++ I  D+IT GLE ALS+GNW ++RFRM RKGVTQVL RLS++A++G MTR++ 
Sbjct: 395 SRFDFSQYIVRDSITNGLERALSTGNWDVKRFRMNRKGVTQVLVRLSYMASLGHMTRISP 454

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEK+RKVSGPRAL PSQWGMLCP DTP
Sbjct: 455 QFEKSRKVSGPRALQPSQWGMLCPCDTP 482

[69][TOP]
>UniRef100_Q84R88 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
           RepID=Q84R88_ORYSJ
          Length = 1174

 Score =  128 bits (321), Expect = 2e-28
 Identities = 59/85 (69%), Positives = 73/85 (85%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           D++  I+ + IT+GLE A+S+GNW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFE
Sbjct: 428 DLSLHIKENIITHGLERAISTGNWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFE 487

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           KTRK SGPRAL PSQWGMLCP DTP
Sbjct: 488 KTRKTSGPRALQPSQWGMLCPCDTP 512

[70][TOP]
>UniRef100_Q10JZ3 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
           RepID=Q10JZ3_ORYSJ
          Length = 1155

 Score =  128 bits (321), Expect = 2e-28
 Identities = 59/85 (69%), Positives = 73/85 (85%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           D++  I+ + IT+GLE A+S+GNW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFE
Sbjct: 409 DLSLHIKENIITHGLERAISTGNWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFE 468

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           KTRK SGPRAL PSQWGMLCP DTP
Sbjct: 469 KTRKTSGPRALQPSQWGMLCPCDTP 493

[71][TOP]
>UniRef100_Q10JZ2 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
           RepID=Q10JZ2_ORYSJ
          Length = 1039

 Score =  128 bits (321), Expect = 2e-28
 Identities = 59/85 (69%), Positives = 73/85 (85%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           D++  I+ + IT+GLE A+S+GNW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFE
Sbjct: 409 DLSLHIKENIITHGLERAISTGNWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFE 468

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           KTRK SGPRAL PSQWGMLCP DTP
Sbjct: 469 KTRKTSGPRALQPSQWGMLCPCDTP 493

[72][TOP]
>UniRef100_B3LB54 DNA-directed RNA polymerase n=1 Tax=Plasmodium knowlesi strain H
           RepID=B3LB54_PLAKH
          Length = 1401

 Score =  127 bits (318), Expect = 5e-28
 Identities = 58/85 (68%), Positives = 73/85 (85%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           DV +++  D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFE
Sbjct: 625 DVFRSLPKDIITRGMQAAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFE 684

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           K RKVSGPRAL PSQWG+LCP DTP
Sbjct: 685 KGRKVSGPRALQPSQWGVLCPCDTP 709

[73][TOP]
>UniRef100_A5K0G6 DNA-directed RNA polymerase n=1 Tax=Plasmodium vivax
           RepID=A5K0G6_PLAVI
          Length = 1427

 Score =  127 bits (318), Expect = 5e-28
 Identities = 58/85 (68%), Positives = 73/85 (85%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           DV +++  D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFE
Sbjct: 622 DVFRSLPKDIITRGMQAAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFE 681

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           K RKVSGPRAL PSQWG+LCP DTP
Sbjct: 682 KGRKVSGPRALQPSQWGVLCPCDTP 706

[74][TOP]
>UniRef100_B9SHS2 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
           RepID=B9SHS2_RICCO
          Length = 1139

 Score =  126 bits (316), Expect = 9e-28
 Identities = 59/88 (67%), Positives = 75/88 (85%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           ++FD+A+ I  D IT GLE  LS+GN+ ++RF+M RKG+TQVL RLS+IA++GMMTR++ 
Sbjct: 399 SRFDLAQYIVRDNITNGLERTLSTGNFDVKRFKMHRKGMTQVLVRLSYIASLGMMTRVSP 458

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEK+RKVSGPRAL PSQWGMLCP DTP
Sbjct: 459 QFEKSRKVSGPRALQPSQWGMLCPCDTP 486

[75][TOP]
>UniRef100_B6AC47 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium muris RN66
           RepID=B6AC47_9CRYT
          Length = 1219

 Score =  126 bits (316), Expect = 9e-28
 Identities = 58/85 (68%), Positives = 72/85 (84%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           D  + + TD IT G+++ALS+GNW I+RFRMER G+TQVLSR S+I+A+G+MTR+ SQFE
Sbjct: 473 DCFRNLPTDIITRGMQTALSTGNWSIKRFRMERSGMTQVLSRYSYISALGIMTRVDSQFE 532

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           K RKVSGPRAL PSQWG+LCP DTP
Sbjct: 533 KARKVSGPRALQPSQWGILCPCDTP 557

[76][TOP]
>UniRef100_Q0CN89 DNA-directed RNA polymerase n=1 Tax=Aspergillus terreus NIH2624
           RepID=Q0CN89_ASPTN
          Length = 1219

 Score =  126 bits (316), Expect = 9e-28
 Identities = 59/81 (72%), Positives = 72/81 (88%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           ++ T+ IT G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRK
Sbjct: 487 SMHTNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRK 546

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           VSGPRAL PSQ+GMLCPADTP
Sbjct: 547 VSGPRALQPSQFGMLCPADTP 567

[77][TOP]
>UniRef100_Q8I5X9 DNA-directed RNA polymerase n=1 Tax=Plasmodium falciparum 3D7
           RepID=Q8I5X9_PLAF7
          Length = 1450

 Score =  125 bits (315), Expect = 1e-27
 Identities = 58/85 (68%), Positives = 72/85 (84%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           DV + +  D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFE
Sbjct: 646 DVFRNLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFE 705

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           K RKVSGPRAL PSQWG+LCP DTP
Sbjct: 706 KGRKVSGPRALQPSQWGVLCPCDTP 730

[78][TOP]
>UniRef100_Q7RNH0 DNA-directed RNA polymerase n=1 Tax=Plasmodium yoelii yoelii
           RepID=Q7RNH0_PLAYO
          Length = 1323

 Score =  125 bits (315), Expect = 1e-27
 Identities = 58/85 (68%), Positives = 72/85 (84%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           DV + +  D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFE
Sbjct: 565 DVFRNLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFE 624

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           K RKVSGPRAL PSQWG+LCP DTP
Sbjct: 625 KGRKVSGPRALQPSQWGVLCPCDTP 649

[79][TOP]
>UniRef100_Q4YMS1 DNA-directed RNA polymerase III subunit, putative (Fragment) n=1
           Tax=Plasmodium berghei RepID=Q4YMS1_PLABE
          Length = 607

 Score =  125 bits (315), Expect = 1e-27
 Identities = 58/85 (68%), Positives = 72/85 (84%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           DV + +  D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFE
Sbjct: 451 DVFRNLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFE 510

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           K RKVSGPRAL PSQWG+LCP DTP
Sbjct: 511 KGRKVSGPRALQPSQWGVLCPCDTP 535

[80][TOP]
>UniRef100_Q4XDD3 DNA-directed RNA polymerase III subunit, putative (Fragment) n=1
           Tax=Plasmodium chabaudi RepID=Q4XDD3_PLACH
          Length = 432

 Score =  125 bits (315), Expect = 1e-27
 Identities = 58/85 (68%), Positives = 72/85 (84%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           DV + +  D IT G+++A+S+GNW I+RF+ME+ GV+QVLSRLSFIA +GMMTR+ SQFE
Sbjct: 300 DVFRNLPKDIITRGMQTAISTGNWNIKRFKMEKSGVSQVLSRLSFIACIGMMTRLNSQFE 359

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           K RKVSGPRAL PSQWG+LCP DTP
Sbjct: 360 KGRKVSGPRALQPSQWGVLCPCDTP 384

[81][TOP]
>UniRef100_Q4PBR7 DNA-directed RNA polymerase n=1 Tax=Ustilago maydis
           RepID=Q4PBR7_USTMA
          Length = 1169

 Score =  125 bits (315), Expect = 1e-27
 Identities = 58/77 (75%), Positives = 68/77 (88%)
 Frame = +1

Query: 34  DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 213
           D IT G   A+S+GNW ++RF+MER G+T VLSRLSFIAA+GMMTR++SQFEKTRKVSGP
Sbjct: 437 DYITSGFVRAISTGNWSLKRFKMERAGITHVLSRLSFIAALGMMTRISSQFEKTRKVSGP 496

Query: 214 RALHPSQWGMLCPADTP 264
           RAL PSQWGMLCP+DTP
Sbjct: 497 RALQPSQWGMLCPSDTP 513

[82][TOP]
>UniRef100_B0XMI5 DNA-directed RNA polymerase n=2 Tax=Aspergillus fumigatus
           RepID=B0XMI5_ASPFC
          Length = 1200

 Score =  125 bits (315), Expect = 1e-27
 Identities = 61/89 (68%), Positives = 75/89 (84%), Gaps = 2/89 (2%)
 Frame = +1

Query: 4   QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177
           QFD     ++ ++ IT G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++
Sbjct: 461 QFDAWTVMSMHSNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRIS 520

Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           SQFEKTRKVSGPRAL PSQ+GMLCPADTP
Sbjct: 521 SQFEKTRKVSGPRALQPSQFGMLCPADTP 549

[83][TOP]
>UniRef100_A1D510 DNA-directed RNA polymerase n=1 Tax=Neosartorya fischeri NRRL 181
           RepID=A1D510_NEOFI
          Length = 1200

 Score =  125 bits (315), Expect = 1e-27
 Identities = 61/89 (68%), Positives = 75/89 (84%), Gaps = 2/89 (2%)
 Frame = +1

Query: 4   QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177
           QFD     ++ ++ IT G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++
Sbjct: 461 QFDAWTVMSMHSNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRIS 520

Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           SQFEKTRKVSGPRAL PSQ+GMLCPADTP
Sbjct: 521 SQFEKTRKVSGPRALQPSQFGMLCPADTP 549

[84][TOP]
>UniRef100_Q5CPZ8 DNA-directed RNA polymerase n=1 Tax=Cryptosporidium parvum Iowa II
           RepID=Q5CPZ8_CRYPV
          Length = 1287

 Score =  125 bits (314), Expect = 1e-27
 Identities = 57/85 (67%), Positives = 72/85 (84%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           D  + + TD IT G+++ALS+GNW I+RFRMER G+TQVL+R S+IA++G+MTR+ SQFE
Sbjct: 531 DCFRNLPTDIITRGMQTALSTGNWSIKRFRMERSGMTQVLTRFSYIASLGIMTRVDSQFE 590

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           K RKVSGPRAL PSQWG+LCP DTP
Sbjct: 591 KARKVSGPRALQPSQWGILCPCDTP 615

[85][TOP]
>UniRef100_C5JTE0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis
           SLH14081 RepID=C5JTE0_AJEDS
          Length = 1204

 Score =  125 bits (314), Expect = 1e-27
 Identities = 62/89 (69%), Positives = 74/89 (83%), Gaps = 2/89 (2%)
 Frame = +1

Query: 4   QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177
           QFD     AI  + IT G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++
Sbjct: 464 QFDAYGVVAIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRIS 523

Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           SQFEKTRKVSGPRAL PSQ+GMLCP+DTP
Sbjct: 524 SQFEKTRKVSGPRALQPSQFGMLCPSDTP 552

[86][TOP]
>UniRef100_C5GKN6 DNA-directed RNA polymerase n=1 Tax=Ajellomyces dermatitidis ER-3
           RepID=C5GKN6_AJEDR
          Length = 1228

 Score =  125 bits (314), Expect = 1e-27
 Identities = 62/89 (69%), Positives = 74/89 (83%), Gaps = 2/89 (2%)
 Frame = +1

Query: 4   QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177
           QFD     AI  + IT G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++
Sbjct: 488 QFDAYGVVAIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRIS 547

Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           SQFEKTRKVSGPRAL PSQ+GMLCP+DTP
Sbjct: 548 SQFEKTRKVSGPRALQPSQFGMLCPSDTP 576

[87][TOP]
>UniRef100_C1HBD0 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
           Pb01 RepID=C1HBD0_PARBA
          Length = 1205

 Score =  125 bits (314), Expect = 1e-27
 Identities = 62/89 (69%), Positives = 74/89 (83%), Gaps = 2/89 (2%)
 Frame = +1

Query: 4   QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177
           QFD     AI  + IT G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++
Sbjct: 465 QFDAYGVVAIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRIS 524

Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           SQFEKTRKVSGPRAL PSQ+GMLCP+DTP
Sbjct: 525 SQFEKTRKVSGPRALQPSQFGMLCPSDTP 553

[88][TOP]
>UniRef100_C1GLZ2 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
           Pb18 RepID=C1GLZ2_PARBD
          Length = 1209

 Score =  125 bits (314), Expect = 1e-27
 Identities = 62/89 (69%), Positives = 74/89 (83%), Gaps = 2/89 (2%)
 Frame = +1

Query: 4   QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177
           QFD     AI  + IT G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++
Sbjct: 507 QFDAYGVVAIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRIS 566

Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           SQFEKTRKVSGPRAL PSQ+GMLCP+DTP
Sbjct: 567 SQFEKTRKVSGPRALQPSQFGMLCPSDTP 595

[89][TOP]
>UniRef100_C0SI08 DNA-directed RNA polymerase n=1 Tax=Paracoccidioides brasiliensis
           Pb03 RepID=C0SI08_PARBP
          Length = 1232

 Score =  125 bits (314), Expect = 1e-27
 Identities = 62/89 (69%), Positives = 74/89 (83%), Gaps = 2/89 (2%)
 Frame = +1

Query: 4   QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177
           QFD     AI  + IT G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++
Sbjct: 507 QFDAYGVVAIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRIS 566

Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           SQFEKTRKVSGPRAL PSQ+GMLCP+DTP
Sbjct: 567 SQFEKTRKVSGPRALQPSQFGMLCPSDTP 595

[90][TOP]
>UniRef100_C0P0A1 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus G186AR
           RepID=C0P0A1_AJECG
          Length = 1227

 Score =  125 bits (314), Expect = 1e-27
 Identities = 62/89 (69%), Positives = 74/89 (83%), Gaps = 2/89 (2%)
 Frame = +1

Query: 4   QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177
           QFD     AI  + IT G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++
Sbjct: 487 QFDAYGVVAIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRIS 546

Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           SQFEKTRKVSGPRAL PSQ+GMLCP+DTP
Sbjct: 547 SQFEKTRKVSGPRALQPSQFGMLCPSDTP 575

[91][TOP]
>UniRef100_A6R9I0 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus NAm1
           RepID=A6R9I0_AJECN
          Length = 1186

 Score =  125 bits (314), Expect = 1e-27
 Identities = 62/89 (69%), Positives = 74/89 (83%), Gaps = 2/89 (2%)
 Frame = +1

Query: 4   QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177
           QFD     AI  + IT G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++
Sbjct: 455 QFDAYGVVAIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRIS 514

Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           SQFEKTRKVSGPRAL PSQ+GMLCP+DTP
Sbjct: 515 SQFEKTRKVSGPRALQPSQFGMLCPSDTP 543

[92][TOP]
>UniRef100_B8MJE1 DNA-directed RNA polymerase n=1 Tax=Talaromyces stipitatus ATCC
           10500 RepID=B8MJE1_TALSN
          Length = 1212

 Score =  125 bits (313), Expect = 2e-27
 Identities = 58/81 (71%), Positives = 72/81 (88%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           A+  + IT+G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRK
Sbjct: 479 ALHGNHITHGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRK 538

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           VSGPRAL PSQ+GMLCP+DTP
Sbjct: 539 VSGPRALQPSQFGMLCPSDTP 559

[93][TOP]
>UniRef100_C4M3E3 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS
           RepID=C4M3E3_ENTHI
          Length = 1122

 Score =  124 bits (312), Expect = 3e-27
 Identities = 56/86 (65%), Positives = 71/86 (82%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186
           FD+ K I    IT GL  +LS+GNW+++RF M+R G+TQVLSRLS+I+A+GMMTR+ S F
Sbjct: 395 FDIIKCISPHRITQGLIHSLSTGNWVLKRFNMDRAGITQVLSRLSYISALGMMTRLNSHF 454

Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264
           EKTRKVSGPR+L  SQWGM+CP+DTP
Sbjct: 455 EKTRKVSGPRSLQGSQWGMVCPSDTP 480

[94][TOP]
>UniRef100_B0EDI3 DNA-directed RNA polymerase n=1 Tax=Entamoeba dispar SAW760
           RepID=B0EDI3_ENTDI
          Length = 1115

 Score =  124 bits (312), Expect = 3e-27
 Identities = 56/86 (65%), Positives = 71/86 (82%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186
           FD+ K I    IT GL  +LS+GNW+++RF M+R G+TQVLSRLS+I+A+GMMTR+ S F
Sbjct: 414 FDIIKCISPHRITQGLIHSLSTGNWVLKRFNMDRAGITQVLSRLSYISALGMMTRLNSHF 473

Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264
           EKTRKVSGPR+L  SQWGM+CP+DTP
Sbjct: 474 EKTRKVSGPRSLQGSQWGMVCPSDTP 499

[95][TOP]
>UniRef100_C4JMP0 DNA-directed RNA polymerase n=1 Tax=Uncinocarpus reesii 1704
           RepID=C4JMP0_UNCRE
          Length = 1202

 Score =  124 bits (312), Expect = 3e-27
 Identities = 59/81 (72%), Positives = 71/81 (87%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI  + IT G+  A+S+GNW ++RFRMER GVT VLSRLS+I+A+GMMTR++SQFEKTRK
Sbjct: 470 AIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYISALGMMTRISSQFEKTRK 529

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           VSGPRAL PSQ+GMLCPADTP
Sbjct: 530 VSGPRALQPSQFGMLCPADTP 550

[96][TOP]
>UniRef100_C6HGH3 DNA-directed RNA polymerase n=1 Tax=Ajellomyces capsulatus H143
           RepID=C6HGH3_AJECH
          Length = 1227

 Score =  124 bits (311), Expect = 3e-27
 Identities = 61/89 (68%), Positives = 74/89 (83%), Gaps = 2/89 (2%)
 Frame = +1

Query: 4   QFDV--AKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177
           QFD     AI  + IT G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GM+TR++
Sbjct: 487 QFDAYGVVAIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMLTRIS 546

Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           SQFEKTRKVSGPRAL PSQ+GMLCP+DTP
Sbjct: 547 SQFEKTRKVSGPRALQPSQFGMLCPSDTP 575

[97][TOP]
>UniRef100_A2Q8V9 DNA-directed RNA polymerase n=1 Tax=Aspergillus niger CBS 513.88
           RepID=A2Q8V9_ASPNC
          Length = 1225

 Score =  124 bits (311), Expect = 3e-27
 Identities = 58/80 (72%), Positives = 71/80 (88%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           + ++ IT G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKV
Sbjct: 494 MHSNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKV 553

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GMLCPADTP
Sbjct: 554 SGPRALQPSQFGMLCPADTP 573

[98][TOP]
>UniRef100_B6QHR9 DNA-directed RNA polymerase n=1 Tax=Penicillium marneffei ATCC
           18224 RepID=B6QHR9_PENMQ
          Length = 1212

 Score =  124 bits (310), Expect = 4e-27
 Identities = 57/75 (76%), Positives = 69/75 (92%)
 Frame = +1

Query: 40  ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRA 219
           IT+G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPRA
Sbjct: 485 ITHGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRA 544

Query: 220 LHPSQWGMLCPADTP 264
           L PSQ+GMLCP+DTP
Sbjct: 545 LQPSQFGMLCPSDTP 559

[99][TOP]
>UniRef100_B6HTA4 DNA-directed RNA polymerase n=1 Tax=Penicillium chrysogenum
           Wisconsin 54-1255 RepID=B6HTA4_PENCW
          Length = 1208

 Score =  124 bits (310), Expect = 4e-27
 Identities = 58/75 (77%), Positives = 68/75 (90%)
 Frame = +1

Query: 40  ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRA 219
           IT G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPRA
Sbjct: 483 ITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRA 542

Query: 220 LHPSQWGMLCPADTP 264
           L PSQ+GMLCPADTP
Sbjct: 543 LQPSQFGMLCPADTP 557

[100][TOP]
>UniRef100_A8PVW9 DNA-directed RNA polymerase n=1 Tax=Malassezia globosa CBS 7966
           RepID=A8PVW9_MALGO
          Length = 1131

 Score =  124 bits (310), Expect = 4e-27
 Identities = 57/77 (74%), Positives = 68/77 (88%)
 Frame = +1

Query: 34  DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 213
           D IT G   A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGP
Sbjct: 409 DYITAGFVRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGP 468

Query: 214 RALHPSQWGMLCPADTP 264
           RAL PSQWGMLCP+DTP
Sbjct: 469 RALQPSQWGMLCPSDTP 485

[101][TOP]
>UniRef100_A1CS37 DNA-directed RNA polymerase n=1 Tax=Aspergillus clavatus
           RepID=A1CS37_ASPCL
          Length = 1246

 Score =  124 bits (310), Expect = 4e-27
 Identities = 58/75 (77%), Positives = 68/75 (90%)
 Frame = +1

Query: 40  ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRA 219
           IT G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPRA
Sbjct: 521 ITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRA 580

Query: 220 LHPSQWGMLCPADTP 264
           L PSQ+GMLCPADTP
Sbjct: 581 LQPSQFGMLCPADTP 595

[102][TOP]
>UniRef100_C5K7V0 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
           RepID=C5K7V0_9ALVE
          Length = 1159

 Score =  123 bits (309), Expect = 6e-27
 Identities = 57/85 (67%), Positives = 72/85 (84%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           DV + I ++ IT G+  A+SSGNW I+RFR++R GV+QVLSR SFIAA+G MTR+ SQFE
Sbjct: 417 DVLRDIDSERITRGMNRAISSGNWNIKRFRIDRSGVSQVLSRFSFIAALGAMTRVKSQFE 476

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           K+RK++GPRAL PSQWGMLCP+DTP
Sbjct: 477 KSRKLAGPRALQPSQWGMLCPSDTP 501

[103][TOP]
>UniRef100_Q1DTS7 DNA-directed RNA polymerase n=2 Tax=Coccidioides RepID=Q1DTS7_COCIM
          Length = 1233

 Score =  123 bits (309), Expect = 6e-27
 Identities = 58/81 (71%), Positives = 71/81 (87%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI  + IT G+  A+S+GNW ++RFRMER GVT VLSRLS+I+A+GMMTR++SQFEKTRK
Sbjct: 501 AIHGNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYISALGMMTRISSQFEKTRK 560

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           VSGPRAL PSQ+GMLCP+DTP
Sbjct: 561 VSGPRALQPSQFGMLCPSDTP 581

[104][TOP]
>UniRef100_A7QMF0 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
           RepID=A7QMF0_VITVI
          Length = 1146

 Score =  123 bits (308), Expect = 7e-27
 Identities = 55/88 (62%), Positives = 74/88 (84%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           ++FD ++ I  D+IT GLE  LS+GNW ++RFRM RKG++QV++RLS+I ++G MT+++ 
Sbjct: 391 SRFDFSQFIVRDSITVGLERTLSTGNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISP 450

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEK+RKVSGPRAL PSQWGMLCP DTP
Sbjct: 451 QFEKSRKVSGPRALQPSQWGMLCPCDTP 478

[105][TOP]
>UniRef100_Q5KC33 DNA-directed RNA polymerase n=1 Tax=Filobasidiella neoformans
           RepID=Q5KC33_CRYNE
          Length = 1129

 Score =  123 bits (308), Expect = 7e-27
 Identities = 60/88 (68%), Positives = 70/88 (79%), Gaps = 2/88 (2%)
 Frame = +1

Query: 7   FDVAKAIRT--DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           FD    IR   D IT     ++S+GNW ++RF +ER GVT VLSRLSFIAA+GMMTR++S
Sbjct: 404 FDAGTLIRQGGDPITQAFVRSISTGNWSLKRFHVERAGVTHVLSRLSFIAALGMMTRISS 463

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
           QFEKTRKVSGPRAL PSQWGMLCP+DTP
Sbjct: 464 QFEKTRKVSGPRALQPSQWGMLCPSDTP 491

[106][TOP]
>UniRef100_Q2GW04 DNA-directed RNA polymerase n=1 Tax=Chaetomium globosum
           RepID=Q2GW04_CHAGB
          Length = 1155

 Score =  123 bits (308), Expect = 7e-27
 Identities = 57/75 (76%), Positives = 65/75 (86%)
 Frame = +1

Query: 40  ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRA 219
           IT GL  A+ SGNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPRA
Sbjct: 428 ITQGLNRAIQSGNWNVKRFNMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRA 487

Query: 220 LHPSQWGMLCPADTP 264
           L PSQWGMLCP+DTP
Sbjct: 488 LQPSQWGMLCPSDTP 502

[107][TOP]
>UniRef100_B0D7Q0 DNA-directed RNA polymerase n=1 Tax=Laccaria bicolor S238N-H82
           RepID=B0D7Q0_LACBS
          Length = 1142

 Score =  123 bits (308), Expect = 7e-27
 Identities = 58/90 (64%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
 Frame = +1

Query: 1   AQFDVAKAIRT--DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRM 174
           ++FD    ++   D +T G   A+S+GNW ++RF+MER GVT VLSRLSFI+A+GMMTR+
Sbjct: 409 SEFDAYNTMQMQGDHLTSGFVRAISTGNWSLKRFKMERAGVTHVLSRLSFISALGMMTRI 468

Query: 175 TSQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           +SQFEKTRKVSGPRAL PSQWG+LCP+DTP
Sbjct: 469 SSQFEKTRKVSGPRALQPSQWGVLCPSDTP 498

[108][TOP]
>UniRef100_A8NJT3 DNA-directed RNA polymerase n=1 Tax=Coprinopsis cinerea
           okayama7#130 RepID=A8NJT3_COPC7
          Length = 1140

 Score =  123 bits (308), Expect = 7e-27
 Identities = 58/90 (64%), Positives = 74/90 (82%), Gaps = 2/90 (2%)
 Frame = +1

Query: 1   AQFDVAKAIRT--DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRM 174
           ++FD    ++   D +T G   A+S+GNW ++RF+MER GVT VLSRLSFI+A+GMMTR+
Sbjct: 407 SEFDAFNTMQMQGDHLTSGFVRAISTGNWSLKRFKMERAGVTHVLSRLSFISALGMMTRI 466

Query: 175 TSQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           +SQFEKTRKVSGPRAL PSQWG+LCP+DTP
Sbjct: 467 SSQFEKTRKVSGPRALQPSQWGVLCPSDTP 496

[109][TOP]
>UniRef100_UPI0001985A70 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI0001985A70
          Length = 1142

 Score =  120 bits (302), Expect = 4e-26
 Identities = 55/91 (60%), Positives = 75/91 (82%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1   AQFDVAKAIR---TDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTR 171
           ++FD ++ +R    D+IT GLE  LS+GNW ++RFRM RKG++QV++RLS+I ++G MT+
Sbjct: 396 SRFDFSQCLRFIVRDSITVGLERTLSTGNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTK 455

Query: 172 MTSQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           ++ QFEK+RKVSGPRAL PSQWGMLCP DTP
Sbjct: 456 ISPQFEKSRKVSGPRALQPSQWGMLCPCDTP 486

[110][TOP]
>UniRef100_Q2URF4 DNA-directed RNA polymerase n=1 Tax=Aspergillus oryzae
           RepID=Q2URF4_ASPOR
          Length = 1180

 Score =  120 bits (302), Expect = 4e-26
 Identities = 57/81 (70%), Positives = 71/81 (87%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           ++ ++ IT G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRK
Sbjct: 448 SMHSNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRK 507

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           VSGPRAL PSQ+GMLC ADTP
Sbjct: 508 VSGPRALQPSQFGMLCLADTP 528

[111][TOP]
>UniRef100_B8MYG2 DNA-directed RNA polymerase n=1 Tax=Aspergillus flavus NRRL3357
           RepID=B8MYG2_ASPFN
          Length = 1218

 Score =  120 bits (302), Expect = 4e-26
 Identities = 57/81 (70%), Positives = 71/81 (87%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           ++ ++ IT G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRK
Sbjct: 486 SMHSNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRK 545

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           VSGPRAL PSQ+GMLC ADTP
Sbjct: 546 VSGPRALQPSQFGMLCLADTP 566

[112][TOP]
>UniRef100_C5FVS4 DNA-directed RNA polymerase n=1 Tax=Microsporum canis CBS 113480
           RepID=C5FVS4_NANOT
          Length = 1211

 Score =  120 bits (301), Expect = 5e-26
 Identities = 57/81 (70%), Positives = 70/81 (86%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI  + IT G+  A+++GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRK
Sbjct: 479 AIHGNHITQGMNRAIATGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRK 538

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           VSGPRAL PSQ+GMLC +DTP
Sbjct: 539 VSGPRALQPSQFGMLCTSDTP 559

[113][TOP]
>UniRef100_B6JW67 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
           yFS275 RepID=B6JW67_SCHJY
          Length = 1160

 Score =  120 bits (301), Expect = 5e-26
 Identities = 57/77 (74%), Positives = 68/77 (88%)
 Frame = +1

Query: 34  DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 213
           D IT G+  ALS+GNW ++RF+MER GVT VLSRLSFI+A+GMMTR+TSQFEKTRKVSGP
Sbjct: 433 DHITQGMVRALSTGNWSLKRFKMERAGVTHVLSRLSFISALGMMTRITSQFEKTRKVSGP 492

Query: 214 RALHPSQWGMLCPADTP 264
           R+L PSQ+GMLC +DTP
Sbjct: 493 RSLQPSQFGMLCTSDTP 509

[114][TOP]
>UniRef100_UPI00003BE866 hypothetical protein DEHA0G24574g n=1 Tax=Debaryomyces hansenii
           CBS767 RepID=UPI00003BE866
          Length = 1165

 Score =  120 bits (300), Expect = 6e-26
 Identities = 56/80 (70%), Positives = 70/80 (87%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           I ++ IT GL  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV
Sbjct: 429 IHSNNITMGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 488

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GMLC ADTP
Sbjct: 489 SGPRALQPSQFGMLCTADTP 508

[115][TOP]
>UniRef100_Q9P6E7 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
           RepID=Q9P6E7_NEUCR
          Length = 1155

 Score =  120 bits (300), Expect = 6e-26
 Identities = 54/75 (72%), Positives = 65/75 (86%)
 Frame = +1

Query: 40  ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRA 219
           I++GL  A+ SGNW ++RF M R G+T VLSRLS+IAA+GMMTR++SQFEKTRKVSGPRA
Sbjct: 428 ISHGLNRAIQSGNWTVKRFNMNRAGITHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRA 487

Query: 220 LHPSQWGMLCPADTP 264
           L PSQWGMLC +DTP
Sbjct: 488 LQPSQWGMLCTSDTP 502

[116][TOP]
>UniRef100_Q59M52 DNA-directed RNA polymerase n=1 Tax=Candida albicans
           RepID=Q59M52_CANAL
          Length = 1157

 Score =  120 bits (300), Expect = 6e-26
 Identities = 56/80 (70%), Positives = 70/80 (87%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           I ++ IT GL  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV
Sbjct: 426 IHSNNITMGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 485

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GMLC ADTP
Sbjct: 486 SGPRALQPSQFGMLCTADTP 505

[117][TOP]
>UniRef100_C5M3E6 DNA-directed RNA polymerase n=1 Tax=Candida tropicalis MYA-3404
           RepID=C5M3E6_CANTT
          Length = 1159

 Score =  120 bits (300), Expect = 6e-26
 Identities = 56/80 (70%), Positives = 70/80 (87%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           I ++ IT GL  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV
Sbjct: 427 IHSNNITMGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 486

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GMLC ADTP
Sbjct: 487 SGPRALQPSQFGMLCTADTP 506

[118][TOP]
>UniRef100_B9WLY1 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
           RepID=B9WLY1_CANDC
          Length = 1157

 Score =  120 bits (300), Expect = 6e-26
 Identities = 56/80 (70%), Positives = 70/80 (87%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           I ++ IT GL  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV
Sbjct: 426 IHSNNITMGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 485

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GMLC ADTP
Sbjct: 486 SGPRALQPSQFGMLCTADTP 505

[119][TOP]
>UniRef100_B5RUZ7 DNA-directed RNA polymerase n=1 Tax=Debaryomyces hansenii
           RepID=B5RUZ7_DEBHA
          Length = 1165

 Score =  120 bits (300), Expect = 6e-26
 Identities = 56/80 (70%), Positives = 70/80 (87%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           I ++ IT GL  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV
Sbjct: 429 IHSNNITMGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 488

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GMLC ADTP
Sbjct: 489 SGPRALQPSQFGMLCTADTP 508

[120][TOP]
>UniRef100_B2B0Z1 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
           RepID=B2B0Z1_PODAN
          Length = 1160

 Score =  120 bits (300), Expect = 6e-26
 Identities = 56/75 (74%), Positives = 64/75 (85%)
 Frame = +1

Query: 40  ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRA 219
           IT GL  A+ SGNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGPRA
Sbjct: 433 ITQGLNRAIQSGNWTVKRFGMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGPRA 492

Query: 220 LHPSQWGMLCPADTP 264
           L PSQWGMLC +DTP
Sbjct: 493 LQPSQWGMLCTSDTP 507

[121][TOP]
>UniRef100_A5E0Z1 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
           RepID=A5E0Z1_LODEL
          Length = 1157

 Score =  120 bits (300), Expect = 6e-26
 Identities = 56/80 (70%), Positives = 70/80 (87%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           I ++ IT GL  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV
Sbjct: 425 IHSNNITMGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 484

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GMLC ADTP
Sbjct: 485 SGPRALQPSQFGMLCTADTP 504

[122][TOP]
>UniRef100_A4R1B6 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
           RepID=A4R1B6_MAGGR
          Length = 1158

 Score =  120 bits (300), Expect = 6e-26
 Identities = 55/75 (73%), Positives = 65/75 (86%)
 Frame = +1

Query: 40  ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRA 219
           IT G+  A+SSGNW ++RF M R GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPRA
Sbjct: 430 ITAGMNRAISSGNWTVKRFNMNRAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPRA 489

Query: 220 LHPSQWGMLCPADTP 264
           L PSQWGMLC +DTP
Sbjct: 490 LQPSQWGMLCTSDTP 504

[123][TOP]
>UniRef100_C8VU19 DNA-directed RNA polymerase III, beta subunit, putative
           (AFU_orthologue; AFUA_1G02460) n=2 Tax=Emericella
           nidulans RepID=C8VU19_EMENI
          Length = 1225

 Score =  119 bits (299), Expect = 8e-26
 Identities = 56/80 (70%), Positives = 70/80 (87%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           + ++ IT G+  A+S+GNW ++RFRMER GVT VLSRLS+IAA+GMMTR++SQFEKTRKV
Sbjct: 494 MHSNHITQGMNRAISTGNWSLKRFRMERAGVTHVLSRLSYIAALGMMTRISSQFEKTRKV 553

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GM+C ADTP
Sbjct: 554 SGPRALQPSQFGMICLADTP 573

[124][TOP]
>UniRef100_Q6FLJ9 DNA-directed RNA polymerase n=1 Tax=Candida glabrata
           RepID=Q6FLJ9_CANGA
          Length = 1133

 Score =  119 bits (298), Expect = 1e-25
 Identities = 55/80 (68%), Positives = 70/80 (87%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           + ++ IT GL  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV
Sbjct: 412 VHSNNITSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 471

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GMLC ADTP
Sbjct: 472 SGPRALQPSQFGMLCTADTP 491

[125][TOP]
>UniRef100_C5DY85 DNA-directed RNA polymerase n=1 Tax=Zygosaccharomyces rouxii CBS
           732 RepID=C5DY85_ZYGRC
          Length = 1143

 Score =  119 bits (298), Expect = 1e-25
 Identities = 55/80 (68%), Positives = 70/80 (87%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           + ++ IT GL  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV
Sbjct: 421 VHSNNITSGLSRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 480

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GMLC ADTP
Sbjct: 481 SGPRALQPSQFGMLCTADTP 500

[126][TOP]
>UniRef100_A7TQC8 DNA-directed RNA polymerase n=1 Tax=Vanderwaltozyma polyspora DSM
           70294 RepID=A7TQC8_VANPO
          Length = 1139

 Score =  119 bits (298), Expect = 1e-25
 Identities = 55/80 (68%), Positives = 70/80 (87%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           + ++ IT GL  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV
Sbjct: 417 VHSNNITSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 476

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GMLC ADTP
Sbjct: 477 SGPRALQPSQFGMLCTADTP 496

[127][TOP]
>UniRef100_P22276 DNA-directed RNA polymerase III subunit RPC2 n=5 Tax=Saccharomyces
           cerevisiae RepID=RPC2_YEAST
          Length = 1149

 Score =  119 bits (298), Expect = 1e-25
 Identities = 55/80 (68%), Positives = 70/80 (87%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           + ++ IT GL  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV
Sbjct: 424 VHSNNITSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 483

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GMLC ADTP
Sbjct: 484 SGPRALQPSQFGMLCTADTP 503

[128][TOP]
>UniRef100_UPI000023E0C8 hypothetical protein FG00843.1 n=1 Tax=Gibberella zeae PH-1
           RepID=UPI000023E0C8
          Length = 1157

 Score =  119 bits (297), Expect = 1e-25
 Identities = 54/77 (70%), Positives = 65/77 (84%)
 Frame = +1

Query: 34  DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 213
           + I YG+  A+ +GNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGP
Sbjct: 425 NNIGYGINRAIQTGNWNVKRFNMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGP 484

Query: 214 RALHPSQWGMLCPADTP 264
           RAL PSQWGMLC +DTP
Sbjct: 485 RALQPSQWGMLCTSDTP 501

[129][TOP]
>UniRef100_Q0V2J8 DNA-directed RNA polymerase n=1 Tax=Phaeosphaeria nodorum
           RepID=Q0V2J8_PHANO
          Length = 1443

 Score =  119 bits (297), Expect = 1e-25
 Identities = 54/81 (66%), Positives = 71/81 (87%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           ++  + IT G+E A+++GNW ++RF+M+R GVT VLSRLS+IAA+GMMTR++SQFEKTRK
Sbjct: 723 SVHKNHITMGIERAIATGNWSLKRFKMDRAGVTHVLSRLSYIAALGMMTRISSQFEKTRK 782

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           VSGPRAL PSQ+GMLC +DTP
Sbjct: 783 VSGPRALQPSQFGMLCTSDTP 803

[130][TOP]
>UniRef100_A3LP81 DNA-directed RNA polymerase n=1 Tax=Pichia stipitis
           RepID=A3LP81_PICST
          Length = 1155

 Score =  119 bits (297), Expect = 1e-25
 Identities = 55/80 (68%), Positives = 70/80 (87%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           I ++ IT GL  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV
Sbjct: 426 IHSNNITMGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 485

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GMLC +DTP
Sbjct: 486 SGPRALQPSQFGMLCTSDTP 505

[131][TOP]
>UniRef100_C9SKJ8 DNA-directed RNA polymerase III subunit RPC2 n=1 Tax=Verticillium
           albo-atrum VaMs.102 RepID=C9SKJ8_9PEZI
          Length = 1105

 Score =  118 bits (296), Expect = 2e-25
 Identities = 53/77 (68%), Positives = 65/77 (84%)
 Frame = +1

Query: 34  DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 213
           + I  G+  A+ +GNW ++RF M R GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGP
Sbjct: 426 NNIGQGINRAIQTGNWTVKRFNMNRAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGP 485

Query: 214 RALHPSQWGMLCPADTP 264
           RAL PSQWGMLCP+DTP
Sbjct: 486 RALQPSQWGMLCPSDTP 502

[132][TOP]
>UniRef100_B7XI25 DNA-directed RNA polymerase n=1 Tax=Enterocytozoon bieneusi H348
           RepID=B7XI25_ENTBH
          Length = 1107

 Score =  118 bits (296), Expect = 2e-25
 Identities = 53/80 (66%), Positives = 66/80 (82%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           ++T +IT  L  A+SSGNW ++RF+MER GVT VL+R S+I A+GMMT++ S FEKTRKV
Sbjct: 389 LQTGSITTTLSRAISSGNWNLKRFKMERSGVTHVLTRYSYITALGMMTKINSHFEKTRKV 448

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPR+LHPS WGM CPADTP
Sbjct: 449 SGPRSLHPSSWGMFCPADTP 468

[133][TOP]
>UniRef100_B2W234 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
           Pt-1C-BFP RepID=B2W234_PYRTR
          Length = 1167

 Score =  118 bits (296), Expect = 2e-25
 Identities = 54/81 (66%), Positives = 71/81 (87%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           ++  + IT G+E A+++GNW ++RF+M+R GVT VLSRLS+IAA+GMMTR++SQFEKTRK
Sbjct: 487 SVHKNHITMGVERAIATGNWSLKRFKMDRAGVTHVLSRLSYIAALGMMTRISSQFEKTRK 546

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           VSGPRAL PSQ+GMLC +DTP
Sbjct: 547 VSGPRALQPSQFGMLCTSDTP 567

[134][TOP]
>UniRef100_UPI000151B156 DNA-directed RNA polymerase III 130 kDa polypeptide n=1 Tax=Pichia
           guilliermondii ATCC 6260 RepID=UPI000151B156
          Length = 1156

 Score =  118 bits (295), Expect = 2e-25
 Identities = 54/80 (67%), Positives = 70/80 (87%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           I ++ IT G+  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV
Sbjct: 424 IHSNNITMGMNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 483

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GMLC +DTP
Sbjct: 484 SGPRALQPSQFGMLCTSDTP 503

[135][TOP]
>UniRef100_Q75B52 DNA-directed RNA polymerase n=1 Tax=Eremothecium gossypii
           RepID=Q75B52_ASHGO
          Length = 1141

 Score =  118 bits (295), Expect = 2e-25
 Identities = 54/80 (67%), Positives = 70/80 (87%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           + ++ IT GL  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV
Sbjct: 419 VHSNNITSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 478

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GMLC +DTP
Sbjct: 479 SGPRALQPSQFGMLCTSDTP 498

[136][TOP]
>UniRef100_C7YHY2 Predicted protein n=1 Tax=Nectria haematococca mpVI 77-13-4
           RepID=C7YHY2_NECH7
          Length = 1156

 Score =  118 bits (295), Expect = 2e-25
 Identities = 54/77 (70%), Positives = 65/77 (84%)
 Frame = +1

Query: 34  DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 213
           +TI  G+  A+ +GNW ++RF M R GVT VLSRLS+IAA+GMMTR++SQFEKTRKVSGP
Sbjct: 425 NTIGIGINRAIQTGNWSVKRFNMNRAGVTHVLSRLSYIAALGMMTRISSQFEKTRKVSGP 484

Query: 214 RALHPSQWGMLCPADTP 264
           RAL PSQWGMLC +DTP
Sbjct: 485 RALQPSQWGMLCTSDTP 501

[137][TOP]
>UniRef100_C4Y486 DNA-directed RNA polymerase n=1 Tax=Clavispora lusitaniae ATCC
           42720 RepID=C4Y486_CLAL4
          Length = 1159

 Score =  118 bits (295), Expect = 2e-25
 Identities = 54/80 (67%), Positives = 70/80 (87%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           I ++ IT G+  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV
Sbjct: 426 IHSNNITMGMNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 485

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GMLC +DTP
Sbjct: 486 SGPRALQPSQFGMLCTSDTP 505

[138][TOP]
>UniRef100_A5DLE5 DNA-directed RNA polymerase n=1 Tax=Pichia guilliermondii
           RepID=A5DLE5_PICGU
          Length = 1156

 Score =  118 bits (295), Expect = 2e-25
 Identities = 54/80 (67%), Positives = 70/80 (87%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           I ++ IT G+  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV
Sbjct: 424 IHSNNITMGMNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 483

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GMLC +DTP
Sbjct: 484 SGPRALQPSQFGMLCTSDTP 503

[139][TOP]
>UniRef100_Q4MYU5 DNA-directed RNA polymerase n=1 Tax=Theileria parva
           RepID=Q4MYU5_THEPA
          Length = 1244

 Score =  117 bits (294), Expect = 3e-25
 Identities = 54/85 (63%), Positives = 72/85 (84%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           D+   + TD IT G+++A+++GNW I+RFRME+ GV+QVLSRLS+I+++GMMT+  SQFE
Sbjct: 488 DIFGLMPTDIITNGMQNAIATGNWNIKRFRMEKSGVSQVLSRLSYISSIGMMTKTDSQFE 547

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           K RKVSGPRAL PSQ+G+LCP DTP
Sbjct: 548 KGRKVSGPRALQPSQFGILCPCDTP 572

[140][TOP]
>UniRef100_C4R793 DNA-directed RNA polymerase n=1 Tax=Pichia pastoris GS115
           RepID=C4R793_PICPG
          Length = 1158

 Score =  117 bits (294), Expect = 3e-25
 Identities = 56/90 (62%), Positives = 75/90 (83%), Gaps = 2/90 (2%)
 Frame = +1

Query: 1   AQFDVAKAIR--TDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRM 174
           ++FD   +I   ++ IT G+  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR+
Sbjct: 420 SEFDALLSINVHSNNITTGINRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRI 479

Query: 175 TSQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           +SQFEK+RKVSGPRAL PSQ+GMLC +DTP
Sbjct: 480 SSQFEKSRKVSGPRALQPSQFGMLCTSDTP 509

[141][TOP]
>UniRef100_Q10233 DNA-directed RNA polymerase III subunit RPC2 n=1
           Tax=Schizosaccharomyces pombe RepID=RPC2_SCHPO
          Length = 1165

 Score =  117 bits (294), Expect = 3e-25
 Identities = 55/80 (68%), Positives = 69/80 (86%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           + +D IT G+  ALS+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR+TSQFEKTRKV
Sbjct: 435 VHSDHITQGMVRALSTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRITSQFEKTRKV 494

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPR+L  SQ+GMLC +DTP
Sbjct: 495 SGPRSLQASQFGMLCTSDTP 514

[142][TOP]
>UniRef100_Q4UB41 DNA-directed RNA polymerase n=1 Tax=Theileria annulata
           RepID=Q4UB41_THEAN
          Length = 1244

 Score =  117 bits (293), Expect = 4e-25
 Identities = 54/85 (63%), Positives = 72/85 (84%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           D+   + TD IT G+++A+++GNW I+RFRME+ GV+QVLSRLS+I+++GMMT+  SQFE
Sbjct: 487 DIFGLMPTDIITNGMQNAIATGNWNIKRFRMEKTGVSQVLSRLSYISSIGMMTKTDSQFE 546

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           K RKVSGPRAL PSQ+G+LCP DTP
Sbjct: 547 KGRKVSGPRALQPSQFGILCPCDTP 571

[143][TOP]
>UniRef100_Q6CLR1 DNA-directed RNA polymerase n=1 Tax=Kluyveromyces lactis
           RepID=Q6CLR1_KLULA
          Length = 1142

 Score =  117 bits (293), Expect = 4e-25
 Identities = 53/80 (66%), Positives = 70/80 (87%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           + ++ IT G+  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV
Sbjct: 420 VHSNNITTGMNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 479

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GMLC +DTP
Sbjct: 480 SGPRALQPSQFGMLCTSDTP 499

[144][TOP]
>UniRef100_A7EEL3 DNA-directed RNA polymerase n=1 Tax=Sclerotinia sclerotiorum 1980
           UF-70 RepID=A7EEL3_SCLS1
          Length = 1230

 Score =  117 bits (293), Expect = 4e-25
 Identities = 54/75 (72%), Positives = 67/75 (89%)
 Frame = +1

Query: 40  ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRA 219
           IT G+  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEKTRKVSGPRA
Sbjct: 503 ITIGMNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKTRKVSGPRA 562

Query: 220 LHPSQWGMLCPADTP 264
           L PSQ+GMLC +DTP
Sbjct: 563 LQPSQFGMLCTSDTP 577

[145][TOP]
>UniRef100_UPI00005DC295 NRPC2; DNA binding / DNA-directed RNA polymerase/ ribonucleoside
           binding n=1 Tax=Arabidopsis thaliana RepID=UPI00005DC295
          Length = 1161

 Score =  117 bits (292), Expect = 5e-25
 Identities = 55/91 (60%), Positives = 74/91 (81%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1   AQFDVAKAIRTDT---ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTR 171
           ++FD ++ +  D+   I+ GLE  LS+GN+ I+RFRM RKG+TQVL+RLSFI +MG +T+
Sbjct: 406 SRFDFSQCLNKDSRYSISLGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITK 465

Query: 172 MTSQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           ++ QFEK+RKVSGPR+L PSQWGMLCP DTP
Sbjct: 466 ISPQFEKSRKVSGPRSLQPSQWGMLCPCDTP 496

[146][TOP]
>UniRef100_Q9FKF1 DNA-directed RNA polymerase n=1 Tax=Arabidopsis thaliana
           RepID=Q9FKF1_ARATH
          Length = 1194

 Score =  117 bits (292), Expect = 5e-25
 Identities = 55/91 (60%), Positives = 74/91 (81%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1   AQFDVAKAIRTDT---ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTR 171
           ++FD ++ +  D+   I+ GLE  LS+GN+ I+RFRM RKG+TQVL+RLSFI +MG +T+
Sbjct: 427 SRFDFSQCLNKDSRYSISLGLERTLSTGNFDIKRFRMHRKGMTQVLTRLSFIGSMGFITK 486

Query: 172 MTSQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           ++ QFEK+RKVSGPR+L PSQWGMLCP DTP
Sbjct: 487 ISPQFEKSRKVSGPRSLQPSQWGMLCPCDTP 517

[147][TOP]
>UniRef100_C5DEU3 DNA-directed RNA polymerase n=1 Tax=Lachancea thermotolerans CBS
           6340 RepID=C5DEU3_LACTC
          Length = 1144

 Score =  116 bits (291), Expect = 7e-25
 Identities = 53/80 (66%), Positives = 70/80 (87%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           + ++ I+ GL  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR++SQFEK+RKV
Sbjct: 422 VHSNNISSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRKV 481

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRAL PSQ+GMLC +DTP
Sbjct: 482 SGPRALQPSQFGMLCTSDTP 501

[148][TOP]
>UniRef100_C4V6K7 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
           RepID=C4V6K7_NOSCE
          Length = 1091

 Score =  116 bits (291), Expect = 7e-25
 Identities = 53/80 (66%), Positives = 66/80 (82%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           ++T+ IT  ++ A+SSGNW +RRFRM+R GVT VL R S+I+A+GMMT++ S FEKTRKV
Sbjct: 390 LQTNIITTSMQRAISSGNWNLRRFRMDRSGVTHVLIRHSYISAVGMMTKVNSHFEKTRKV 449

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPRALH S WGM CPADTP
Sbjct: 450 SGPRALHTSSWGMFCPADTP 469

[149][TOP]
>UniRef100_Q4QD43 DNA-directed RNA polymerase n=1 Tax=Leishmania major
           RepID=Q4QD43_LEIMA
          Length = 1132

 Score =  116 bits (290), Expect = 9e-25
 Identities = 51/79 (64%), Positives = 65/79 (82%)
 Frame = +1

Query: 28  RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 207
           + + I  G+  A+SSG W ++RF M R+G+TQVLSRLS+IA++GMMTR+ S FEKTRKVS
Sbjct: 419 KMEVIQNGMRMAISSGRWDLKRFNMNRQGITQVLSRLSYIASLGMMTRLASSFEKTRKVS 478

Query: 208 GPRALHPSQWGMLCPADTP 264
           GPR+L PSQWGM+CP DTP
Sbjct: 479 GPRSLQPSQWGMVCPCDTP 497

[150][TOP]
>UniRef100_Q6CEE6 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
           RepID=Q6CEE6_YARLI
          Length = 1169

 Score =  116 bits (290), Expect = 9e-25
 Identities = 56/90 (62%), Positives = 73/90 (81%), Gaps = 2/90 (2%)
 Frame = +1

Query: 1   AQFDVAKAIRTD--TITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRM 174
           + FD    + T   +IT G+  A+S+GNW ++RF+MER GVT VLSRLS+I+A+GMMTR+
Sbjct: 423 SMFDALLNLETHRGSITSGMNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRI 482

Query: 175 TSQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           +SQFEK+RKVSGPRAL PSQ+GMLC +DTP
Sbjct: 483 SSQFEKSRKVSGPRALQPSQFGMLCTSDTP 512

[151][TOP]
>UniRef100_A4HBG9 DNA-directed RNA polymerase n=1 Tax=Leishmania braziliensis
           RepID=A4HBG9_LEIBR
          Length = 1125

 Score =  115 bits (289), Expect = 1e-24
 Identities = 51/79 (64%), Positives = 64/79 (81%)
 Frame = +1

Query: 28  RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 207
           + + I  G+  A+SSG W ++RF M R+G+TQVLSRLS+IA +GMMTR+ S FEKTRKVS
Sbjct: 412 KMEVIQNGMRMAISSGRWDLKRFNMNRQGITQVLSRLSYIACLGMMTRLASSFEKTRKVS 471

Query: 208 GPRALHPSQWGMLCPADTP 264
           GPR+L PSQWGM+CP DTP
Sbjct: 472 GPRSLQPSQWGMVCPCDTP 490

[152][TOP]
>UniRef100_Q6E6F3 DNA-directed RNA polymerase n=1 Tax=Antonospora locustae
           RepID=Q6E6F3_ANTLO
          Length = 1014

 Score =  115 bits (287), Expect = 2e-24
 Identities = 52/80 (65%), Positives = 65/80 (81%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           ++ + I+     A+S+GNW +RRFRMER GVTQVLSRLS+IA +G M ++ SQFEKTRK+
Sbjct: 318 LQVNLISNSFVRAISTGNWTVRRFRMERAGVTQVLSRLSYIAMIGSMAKIQSQFEKTRKI 377

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPR+LH S WGMLCPADTP
Sbjct: 378 SGPRSLHTSSWGMLCPADTP 397

[153][TOP]
>UniRef100_Q4D9P5 DNA-directed RNA polymerase n=1 Tax=Trypanosoma cruzi
           RepID=Q4D9P5_TRYCR
          Length = 1130

 Score =  114 bits (284), Expect = 4e-24
 Identities = 50/79 (63%), Positives = 64/79 (81%)
 Frame = +1

Query: 28  RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 207
           + + I  G+  ALSSG W ++RF M R+G+TQVLSRLS+IA +GMMTR+ S FEK+RK+S
Sbjct: 417 KLEVIQSGMRVALSSGRWELKRFNMSRQGITQVLSRLSYIACIGMMTRLASSFEKSRKIS 476

Query: 208 GPRALHPSQWGMLCPADTP 264
           GPR+L PSQWGM+CP DTP
Sbjct: 477 GPRSLQPSQWGMVCPCDTP 495

[154][TOP]
>UniRef100_Q236N3 DNA-directed RNA polymerase n=1 Tax=Tetrahymena thermophila SB210
           RepID=Q236N3_TETTH
          Length = 1141

 Score =  114 bits (284), Expect = 4e-24
 Identities = 51/77 (66%), Positives = 67/77 (87%)
 Frame = +1

Query: 34  DTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGP 213
           D IT GL +A+S+GNW I+RFRM+  GVTQVL+R+S+IAA+GMMTRM SQF+K+RK++GP
Sbjct: 403 DIITQGLNNAISTGNWTIKRFRMDTVGVTQVLARISYIAAIGMMTRMNSQFKKSRKLTGP 462

Query: 214 RALHPSQWGMLCPADTP 264
           R+L  S WG++CPADTP
Sbjct: 463 RSLLGSHWGLVCPADTP 479

[155][TOP]
>UniRef100_Q8SQY8 DNA-directed RNA polymerase n=1 Tax=Encephalitozoon cuniculi
           RepID=Q8SQY8_ENCCU
          Length = 1110

 Score =  114 bits (284), Expect = 4e-24
 Identities = 52/80 (65%), Positives = 65/80 (81%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           ++ + IT  L  A+S+GNW ++RFRMER GVT VLSR S+I+A+GMMT++ S FEKTRKV
Sbjct: 390 LQANMITSTLARAISTGNWNLKRFRMERSGVTHVLSRHSYISALGMMTKINSHFEKTRKV 449

Query: 205 SGPRALHPSQWGMLCPADTP 264
           SGPR+LH S WGMLCP DTP
Sbjct: 450 SGPRSLHTSSWGMLCPVDTP 469

[156][TOP]
>UniRef100_C9ZHX4 DNA-directed RNA polymerase III, putative n=2 Tax=Trypanosoma
           brucei RepID=C9ZHX4_TRYBG
          Length = 1129

 Score =  112 bits (281), Expect = 1e-23
 Identities = 49/79 (62%), Positives = 64/79 (81%)
 Frame = +1

Query: 28  RTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVS 207
           + + I  G+  ALSSG W ++RF M R+G+TQVLSRLS+I+ +GMMTR+ S FEK+RK+S
Sbjct: 416 KMEVIQNGMRVALSSGRWELKRFNMSRQGITQVLSRLSYISCIGMMTRLASSFEKSRKIS 475

Query: 208 GPRALHPSQWGMLCPADTP 264
           GPR+L PSQWGM+CP DTP
Sbjct: 476 GPRSLQPSQWGMVCPCDTP 494

[157][TOP]
>UniRef100_A7AM79 DNA-directed RNA polymerase, beta subunit, putative n=1 Tax=Babesia
           bovis RepID=A7AM79_BABBO
          Length = 1171

 Score =  112 bits (280), Expect = 1e-23
 Identities = 51/85 (60%), Positives = 68/85 (80%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           D   ++ TD IT G+++ +S+GNW I+RFR+ER GV+Q+LSRLS+I+ +GMMT+  SQFE
Sbjct: 451 DCLVSLPTDIITRGMQATISTGNWNIKRFRIERSGVSQILSRLSYISCLGMMTKTNSQFE 510

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           K RKVS PRAL PSQ G++CP DTP
Sbjct: 511 KGRKVSKPRALQPSQLGLICPCDTP 535

[158][TOP]
>UniRef100_A9BK45 DNA-directed RNA polymerase n=1 Tax=Cryptophyta RepID=A9BK45_9CRYP
          Length = 1100

 Score =  110 bits (274), Expect = 6e-23
 Identities = 47/80 (58%), Positives = 66/80 (82%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           +R D IT GLE + S+GNWI+++ ++E+ GVTQ LSRLSFI+++ ++T++TSQ EK RK+
Sbjct: 398 LRQDIITNGLEYSFSTGNWIVKKLKIEKNGVTQTLSRLSFISSISIVTKITSQNEKIRKI 457

Query: 205 SGPRALHPSQWGMLCPADTP 264
            GPR+LH SQWGM+CP DTP
Sbjct: 458 RGPRSLHSSQWGMICPTDTP 477

[159][TOP]
>UniRef100_UPI00006A103B DNA-directed RNA polymerase III subunit RPC2 (EC 2.7.7.6) (RNA
           polymerase III subunit C2) (DNA-directed RNA polymerase
           III subunit B) (DNA-directed RNA polymerase III 127.6
           kDa polypeptide) (C128). n=1 Tax=Xenopus (Silurana)
           tropicalis RepID=UPI00006A103B
          Length = 1122

 Score =  109 bits (273), Expect = 8e-23
 Identities = 52/72 (72%), Positives = 65/72 (90%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+SSGNW ++RF+M+R+GVTQVLSRLS+IAA+GMMTR++S
Sbjct: 401 AQFDVVKHMRQDQITNGMVNAISSGNWSLKRFKMDRQGVTQVLSRLSYIAALGMMTRISS 460

Query: 181 QFEKTRKVSGPR 216
           QFEKTRKVSGPR
Sbjct: 461 QFEKTRKVSGPR 472

[160][TOP]
>UniRef100_A2E3T5 DNA-directed RNA polymerase n=1 Tax=Trichomonas vaginalis G3
           RepID=A2E3T5_TRIVA
          Length = 1142

 Score =  105 bits (263), Expect = 1e-21
 Identities = 46/85 (54%), Positives = 71/85 (83%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           ++A+A+ ++TIT+GL+ A+SSGNW I RF+M R GV+Q+L R+S++  + M+TR++S FE
Sbjct: 406 NIAQAMHSETITHGLKYAISSGNWNITRFKMMRAGVSQLLGRMSYLQFVSMVTRISSHFE 465

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
           KT+KV+G R L+PSQ+G +CP+DTP
Sbjct: 466 KTQKVAGARLLYPSQFGFICPSDTP 490

[161][TOP]
>UniRef100_B9F8X6 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
           RepID=B9F8X6_ORYSJ
          Length = 1115

 Score =  105 bits (261), Expect = 2e-21
 Identities = 50/75 (66%), Positives = 64/75 (85%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           D++  I+ + IT+GLE A+S+GNW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFE
Sbjct: 469 DLSLHIKENIITHGLERAISTGNWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFE 528

Query: 190 KTRKVSGPRALHPSQ 234
           KTRK SGPRAL PSQ
Sbjct: 529 KTRKTSGPRALQPSQ 543

[162][TOP]
>UniRef100_B8AR02 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
           RepID=B8AR02_ORYSI
          Length = 1117

 Score =  105 bits (261), Expect = 2e-21
 Identities = 50/75 (66%), Positives = 64/75 (85%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           D++  I+ + IT+GLE A+S+GNW I+RFRM RKGV+QVLSRLS++A++G MTR+T QFE
Sbjct: 471 DLSLHIKENIITHGLERAISTGNWDIKRFRMHRKGVSQVLSRLSYMASLGYMTRITPQFE 530

Query: 190 KTRKVSGPRALHPSQ 234
           KTRK SGPRAL PSQ
Sbjct: 531 KTRKTSGPRALQPSQ 545

[163][TOP]
>UniRef100_C5KAB2 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
           RepID=C5KAB2_9ALVE
          Length = 1140

 Score =  103 bits (256), Expect = 8e-21
 Identities = 53/92 (57%), Positives = 67/92 (72%), Gaps = 6/92 (6%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESAL------SSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMT 168
           F    + R    T GL+S        ++GN  I+RFR++R GV+QVLSR SFIAA+G MT
Sbjct: 396 FQQTSSARAGRSTVGLDSGYPDVLLRATGN--IKRFRIDRSGVSQVLSRFSFIAALGAMT 453

Query: 169 RMTSQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           R+ SQFEK+RK++GPRAL PSQWGMLCP+DTP
Sbjct: 454 RVKSQFEKSRKLAGPRALQPSQWGMLCPSDTP 485

[164][TOP]
>UniRef100_A0D7M6 DNA-directed RNA polymerase n=1 Tax=Paramecium tetraurelia
           RepID=A0D7M6_PARTE
          Length = 1131

 Score =  101 bits (251), Expect = 3e-20
 Identities = 46/75 (61%), Positives = 62/75 (82%)
 Frame = +1

Query: 40  ITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKVSGPRA 219
           IT GL  A+ +G W I+RF M+R+GVTQ+L+R+S+ +A+GM+T+M SQ +KT KVSGPRA
Sbjct: 398 ITKGLNRAIKTGKWTIQRFHMDRQGVTQLLARISYTSALGMLTKMRSQVQKTLKVSGPRA 457

Query: 220 LHPSQWGMLCPADTP 264
           L  SQ+GM+CPADTP
Sbjct: 458 LVGSQFGMICPADTP 472

[165][TOP]
>UniRef100_UPI00016E4F58 UPI00016E4F58 related cluster n=1 Tax=Takifugu rubripes
           RepID=UPI00016E4F58
          Length = 1118

 Score = 99.8 bits (247), Expect = 9e-20
 Identities = 47/71 (66%), Positives = 61/71 (85%)
 Frame = +1

Query: 1   AQFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           AQFDV K +R D IT G+ +A+S+GNW ++RF+M+R+GVTQVLSRLSFI+A+GMMTR++S
Sbjct: 397 AQFDVVKHMRQDQITNGMVNAISTGNWSLKRFKMDRQGVTQVLSRLSFISALGMMTRISS 456

Query: 181 QFEKTRKVSGP 213
           QFEKTRK   P
Sbjct: 457 QFEKTRKSDTP 467

[166][TOP]
>UniRef100_Q98S96 DNA-directed RNA polymerase n=1 Tax=Guillardia theta
           RepID=Q98S96_GUITH
          Length = 1049

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 39/80 (48%), Positives = 61/80 (76%)
 Frame = +1

Query: 25  IRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRKV 204
           I++D I+YG+E+A  +GNW I ++ +++ G+TQ+LSRLSF+++  M+ + +S FEKTRK 
Sbjct: 377 IKSDFISYGIENAFITGNWKINKYGIDKNGITQILSRLSFMSSFSMLLKTSSNFEKTRKS 436

Query: 205 SGPRALHPSQWGMLCPADTP 264
             PR LHP+QW  +C +DTP
Sbjct: 437 ISPRNLHPTQWRFICTSDTP 456

[167][TOP]
>UniRef100_C6LZ34 DNA-directed RNA polymerase n=1 Tax=Giardia intestinalis ATCC 50581
           RepID=C6LZ34_GIALA
          Length = 1239

 Score = 92.0 bits (227), Expect = 2e-17
 Identities = 43/86 (50%), Positives = 60/86 (69%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186
           +DV   +    IT    SA+S+GNW I R  ++R GV+QVLSRLS+I+ +G +TR++S F
Sbjct: 493 YDVVSLVDPSIITRAFNSAISTGNWKIERIGVDRVGVSQVLSRLSYISTLGQVTRLSSTF 552

Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264
           +K  K SGPR L+ SQ G+ CP+DTP
Sbjct: 553 DKAMKSSGPRMLNFSQMGIFCPSDTP 578

[168][TOP]
>UniRef100_A8B2N4 DNA-directed RNA polymerase n=1 Tax=Giardia lamblia ATCC 50803
           RepID=A8B2N4_GIALA
          Length = 1238

 Score = 91.7 bits (226), Expect = 2e-17
 Identities = 41/86 (47%), Positives = 61/86 (70%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186
           +D+   +    IT    SA+S+GNW I +  ++R GV+Q+LSRLS+I+A+G +TR++S F
Sbjct: 492 YDIVSLVDPSIITRAFNSAISTGNWKIEKIGVDRVGVSQILSRLSYISALGQVTRLSSTF 551

Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264
           +K  K SGPR L+ SQ G+ CP+DTP
Sbjct: 552 DKAMKSSGPRMLNFSQMGIFCPSDTP 577

[169][TOP]
>UniRef100_C5LU72 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
           RepID=C5LU72_9ALVE
          Length = 1171

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 40/88 (45%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
 Frame = +1

Query: 7   FDVAKAIRT-DTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           FD+  AIR+  +IT GL   L++GNW I +  +  R GV+QVL+RL+F++ M  + RM +
Sbjct: 416 FDLNSAIRSASSITDGLRYQLATGNWGIDKSGKSVRTGVSQVLNRLTFMSTMSHLRRMNT 475

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
             E++ K++ PR LH + WGM+CPA+TP
Sbjct: 476 PLERSGKLAKPRQLHNTHWGMICPAETP 503

[170][TOP]
>UniRef100_C5LHP3 DNA-directed RNA polymerase n=1 Tax=Perkinsus marinus ATCC 50983
           RepID=C5LHP3_9ALVE
          Length = 993

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 40/88 (45%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
 Frame = +1

Query: 7   FDVAKAIRT-DTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           FD+  AIR+  +IT GL   L++GNW I +  +  R GV+QVL+RL+F++ M  + RM +
Sbjct: 454 FDLNSAIRSASSITDGLRYQLATGNWGIDKSGKSVRTGVSQVLNRLTFMSTMSHLRRMNT 513

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
             E++ K++ PR LH + WGM+CPA+TP
Sbjct: 514 PLERSGKLAKPRQLHNTHWGMICPAETP 541

[171][TOP]
>UniRef100_Q1L6D8 DNA-directed RNA polymerase (Fragment) n=2 Tax=Dianthus
           RepID=Q1L6D8_DIACA
          Length = 674

 Score = 77.8 bits (190), Expect = 4e-13
 Identities = 36/81 (44%), Positives = 54/81 (66%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL++ + +  + R+ S   +  K
Sbjct: 57  AIKAKTITSGLKYSLATGNWGAANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 116

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH SQWGM+CPA+TP
Sbjct: 117 LAKPRQLHNSQWGMMCPAETP 137

[172][TOP]
>UniRef100_UPI0001926137 PREDICTED: similar to predicted protein n=1 Tax=Hydra
           magnipapillata RepID=UPI0001926137
          Length = 1426

 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 37/87 (42%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F +  AI+T TIT GL  +L++GNW   ++    R GV+QVL+RL+F + +  + R+ S 
Sbjct: 434 FKIELAIKTKTITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSP 493

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH + WGM+CPA+TP
Sbjct: 494 IGRDGKLARPRQLHNTHWGMICPAETP 520

[173][TOP]
>UniRef100_C1ML14 DNA-directed RNA polymerase n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1ML14_9CHLO
          Length = 1172

 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 36/87 (41%), Positives = 57/87 (65%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           +  +  A++  TIT GL+ +L++GNW  +  +  R GV+QVL+RLSF + +  + R+ S 
Sbjct: 425 EIQLTLAVKAKTITSGLKYSLATGNWGAQGAQDIRAGVSQVLNRLSFSSTLSHLRRLNSP 484

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH S WGM+CPA+TP
Sbjct: 485 IGREGKLAKPRQLHNSHWGMVCPAETP 511

[174][TOP]
>UniRef100_B8Y3L8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Arthonia caesia
           RepID=B8Y3L8_9PEZI
          Length = 685

 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 37/88 (42%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTS 180
           +F++A AI+ +TIT GL  +L++GNW  ++   + K GV+QVLSR +F AA+  + R  +
Sbjct: 28  EFNLAMAIKPNTITQGLRYSLATGNWGDQKKAAKAKAGVSQVLSRYTFAAALSHLRRTNT 87

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WG++CPA+TP
Sbjct: 88  PIGRDGKIAKPRQLHNTHWGLVCPAETP 115

[175][TOP]
>UniRef100_A1YIE4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix
           frontalis RepID=A1YIE4_NEOFR
          Length = 915

 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 36/88 (40%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIR-RFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           +F++  AIR +TIT GL+ +L++GNW  + +F   R GV+QVL+R +F + +  + R+ +
Sbjct: 240 EFNLNVAIRPNTITDGLKYSLATGNWGAQSKFMQSRAGVSQVLNRYTFASTLSHLRRLNT 299

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 300 PIGRDGKLAKPRQLHNTHWGMVCPAETP 327

[176][TOP]
>UniRef100_Q8SR75 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Encephalitozoon
           cuniculi RepID=RPB2_ENCCU
          Length = 1141

 Score = 77.4 bits (189), Expect = 5e-13
 Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTS 180
           +F++A  ++   IT G   AL++GNW  +   M+ R GV QVL+R +F++ +  + R+ +
Sbjct: 400 EFNIALGLKASIITQGFRYALATGNWGDQAKAMQTRAGVAQVLNRYNFVSTLSHLRRVNT 459

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
             EK  K++ PR LH + WGM+CPA+TP
Sbjct: 460 PIEKEGKLAAPRQLHNTHWGMVCPAETP 487

[177][TOP]
>UniRef100_Q1L6E0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coriaria sarmentosa
           RepID=Q1L6E0_9ROSI
          Length = 952

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 36/81 (44%), Positives = 54/81 (66%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL++ + +  + R+ S   +  K
Sbjct: 334 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 393

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH SQWGM+CPA+TP
Sbjct: 394 LAKPRQLHNSQWGMMCPAETP 414

[178][TOP]
>UniRef100_Q1L6B6 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Nepenthes maxima RepID=Q1L6B6_9CARY
          Length = 667

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 36/81 (44%), Positives = 54/81 (66%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL++ + +  + R+ S   +  K
Sbjct: 335 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 394

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH SQWGM+CPA+TP
Sbjct: 395 LAKPRQLHNSQWGMMCPAETP 415

[179][TOP]
>UniRef100_Q1L5Z0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nicotiana sylvestris
           RepID=Q1L5Z0_NICSY
          Length = 1087

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 36/81 (44%), Positives = 54/81 (66%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL++ + +  + R+ S   +  K
Sbjct: 341 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 400

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH SQWGM+CPA+TP
Sbjct: 401 LAKPRQLHNSQWGMMCPAETP 421

[180][TOP]
>UniRef100_Q1L5Y9 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida
           RepID=Q1L5Y9_PETHY
          Length = 1195

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 36/81 (44%), Positives = 54/81 (66%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL++ + +  + R+ S   +  K
Sbjct: 442 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 501

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH SQWGM+CPA+TP
Sbjct: 502 LAKPRQLHNSQWGMMCPAETP 522

[181][TOP]
>UniRef100_Q1L5B7 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Camellia japonica RepID=Q1L5B7_9ERIC
          Length = 417

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 36/81 (44%), Positives = 54/81 (66%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL++ + +  + R+ S   +  K
Sbjct: 334 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 393

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH SQWGM+CPA+TP
Sbjct: 394 LAKPRQLHNSQWGMMCPAETP 414

[182][TOP]
>UniRef100_Q1L5B5 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum
           RepID=Q1L5B5_RHOMC
          Length = 1191

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 36/81 (44%), Positives = 54/81 (66%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL++ + +  + R+ S   +  K
Sbjct: 438 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 497

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH SQWGM+CPA+TP
Sbjct: 498 LAKPRQLHNSQWGMMCPAETP 518

[183][TOP]
>UniRef100_Q1L5B3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Astilbe sp.
           Yoshikawa s.n. RepID=Q1L5B3_9MAGN
          Length = 951

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 36/81 (44%), Positives = 54/81 (66%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL++ + +  + R+ S   +  K
Sbjct: 334 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 393

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH SQWGM+CPA+TP
Sbjct: 394 LAKPRQLHNSQWGMMCPAETP 414

[184][TOP]
>UniRef100_Q1L5A9 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Liquidambar acalycina RepID=Q1L5A9_9MAGN
          Length = 453

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 36/81 (44%), Positives = 54/81 (66%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL++ + +  + R+ S   +  K
Sbjct: 334 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 393

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH SQWGM+CPA+TP
Sbjct: 394 LAKPRQLHNSQWGMMCPAETP 414

[185][TOP]
>UniRef100_Q1L5A7 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Spinacia oleracea RepID=Q1L5A7_SPIOL
          Length = 495

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 36/81 (44%), Positives = 54/81 (66%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL++ + +  + R+ S   +  K
Sbjct: 398 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 457

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH SQWGM+CPA+TP
Sbjct: 458 LAKPRQLHNSQWGMMCPAETP 478

[186][TOP]
>UniRef100_C1E1U0 DNA-directed RNA polymerase n=1 Tax=Micromonas sp. RCC299
           RepID=C1E1U0_9CHLO
          Length = 1178

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 36/81 (44%), Positives = 55/81 (67%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           A++  TIT GL+ +L++GNW  +  +  R GV+QVL+RLSF + +  + R+ S   +  K
Sbjct: 438 AVKAKTITSGLKYSLATGNWGAQGAQDIRAGVSQVLNRLSFSSTLSHLRRLNSPIGREGK 497

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH S WGM+CPA+TP
Sbjct: 498 LAKPRQLHNSHWGMVCPAETP 518

[187][TOP]
>UniRef100_B9RZ91 DNA-directed RNA polymerase n=1 Tax=Ricinus communis
           RepID=B9RZ91_RICCO
          Length = 1194

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 36/81 (44%), Positives = 54/81 (66%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL++ + +  + R+ S   +  K
Sbjct: 441 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 500

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH SQWGM+CPA+TP
Sbjct: 501 LAKPRQLHNSQWGMMCPAETP 521

[188][TOP]
>UniRef100_B9H2V2 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
           RepID=B9H2V2_POPTR
          Length = 690

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 36/81 (44%), Positives = 54/81 (66%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL++ + +  + R+ S   +  K
Sbjct: 438 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 497

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH SQWGM+CPA+TP
Sbjct: 498 LAKPRQLHNSQWGMMCPAETP 518

[189][TOP]
>UniRef100_Q27548 DNA-directed RNA polymerase (Fragment) n=1 Tax=Crassostrea gigas
           RepID=Q27548_CRAGI
          Length = 859

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 37/87 (42%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  AI+T  IT GL+ +L++GNW   ++    R GV+QVL+RL+F + +  + R+ S 
Sbjct: 236 FNLELAIKTRIITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSP 295

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH +QWGM+CPA+TP
Sbjct: 296 IGRDGKLARPRQLHNTQWGMICPAETP 322

[190][TOP]
>UniRef100_B3S2W9 DNA-directed RNA polymerase n=1 Tax=Trichoplax adhaerens
           RepID=B3S2W9_TRIAD
          Length = 1196

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 36/87 (41%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  AI+T  IT GL  +L++GNW   ++    R GV+QVL+RL+F++ +  + R+ S 
Sbjct: 417 FNLELAIKTKIITDGLRYSLATGNWGDQKKAHQSRAGVSQVLNRLTFVSTLSHLRRLNSP 476

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH + WGM+CPA+TP
Sbjct: 477 IGRDGKLARPRQLHNTHWGMICPAETP 503

[191][TOP]
>UniRef100_A7ATA0 DNA-directed RNA polymerase n=1 Tax=Babesia bovis
           RepID=A7ATA0_BABBO
          Length = 1207

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 39/89 (43%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
 Frame = +1

Query: 4   QFDVAKAIRTDT-ITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMT 177
           +FDVA A+R+ T IT+GL+  L +GNW   R  ++ R GV+QVL+RL+F + +  + R+ 
Sbjct: 470 EFDVAGAVRSATQITHGLQYQLLTGNWGRDRDGKVVRTGVSQVLNRLTFASYLSHLRRLN 529

Query: 178 SQFEKTRKVSGPRALHPSQWGMLCPADTP 264
           +   +  K++ PR LH + WGM+CPA+TP
Sbjct: 530 TPLGREGKIAKPRQLHNTHWGMICPAETP 558

[192][TOP]
>UniRef100_Q207F5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tremellodendron
           pallidum RepID=Q207F5_9HOMO
          Length = 716

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 36/87 (41%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTSQ 183
           FDV++AI+  TI+ GL+ +L++GNW  ++  M  K GV+QVL+R +F + +  + R  + 
Sbjct: 42  FDVSRAIKVATISNGLKYSLATGNWGDQQHAMSSKAGVSQVLNRYTFASTLSHLRRCNTP 101

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH + WGM+CPA+TP
Sbjct: 102 LGREGKIAKPRQLHNTHWGMVCPAETP 128

[193][TOP]
>UniRef100_Q0MT73 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Wallemia muriae RepID=Q0MT73_WALMU
          Length = 365

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 34/88 (38%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           +F++ +A++ +TIT GL+ +L++GNW   ++F   R GV+QVL+R +F + +  + R  +
Sbjct: 40  EFNLNQAVKANTITNGLKYSLATGNWGDQKKFXQARAGVSQVLNRYTFASTLSHLRRCNT 99

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 100 PIGRDGKIAKPRQLHNTHWGMVCPAETP 127

[194][TOP]
>UniRef100_Q0MT72 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Wallemia sebi RepID=Q0MT72_WALSE
          Length = 374

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 34/88 (38%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           +F++ +A++ +TIT GL+ +L++GNW   ++F   R GV+QVL+R +F + +  + R  +
Sbjct: 46  EFNLNQAVKANTITNGLKYSLATGNWGDQKKFMQARAGVSQVLNRYTFASTLSHLRRCNT 105

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 106 PIGRDGKIAKPRQLHNTHWGMVCPAETP 133

[195][TOP]
>UniRef100_Q42877 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Solanum
           lycopersicum RepID=RPB2_SOLLC
          Length = 1191

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 36/81 (44%), Positives = 54/81 (66%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL++ + +  + R+ S   +  K
Sbjct: 438 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 497

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH SQWGM+CPA+TP
Sbjct: 498 LAKPRQLHNSQWGMMCPAETP 518

[196][TOP]
>UniRef100_P38420 DNA-directed RNA polymerase II subunit RPB2 n=1 Tax=Arabidopsis
           thaliana RepID=RPB2_ARATH
          Length = 1188

 Score = 77.0 bits (188), Expect = 6e-13
 Identities = 36/81 (44%), Positives = 54/81 (66%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL++ + +  + R+ S   +  K
Sbjct: 439 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 498

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH SQWGM+CPA+TP
Sbjct: 499 LAKPRQLHNSQWGMMCPAETP 519

[197][TOP]
>UniRef100_A9SJE5 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
           patens RepID=A9SJE5_PHYPA
          Length = 1185

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 35/87 (40%), Positives = 57/87 (65%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           + ++A A++  TIT GL+ +L++GNW        R GV+QVL+RL++ + +  + R+ S 
Sbjct: 426 EINLAYAVKAKTITSGLKYSLATGNWGQANTAGVRAGVSQVLNRLTYASTLSHLRRLNSP 485

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH S WGM+CPA+TP
Sbjct: 486 IGREGKLAKPRQLHNSHWGMMCPAETP 512

[198][TOP]
>UniRef100_Q27670 DNA-directed RNA polymerase (Fragment) n=1 Tax=Helobdella stagnalis
           RepID=Q27670_9ANNE
          Length = 859

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 37/87 (42%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  AI+T TIT GL+ +L++GNW   ++    R GV+QVL+RL+F + +  + R+ S 
Sbjct: 236 FNLELAIKTRTITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSP 295

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH + WGM+CPA+TP
Sbjct: 296 IGRDGKLARPRQLHNTLWGMICPAETP 322

[199][TOP]
>UniRef100_Q2I5U9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces arbuscula
           RepID=Q2I5U9_ALLAR
          Length = 584

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 37/88 (42%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTS 180
           +F++  AI ++TIT GL  AL++GNW  ++  ME R GV+QVL+R +F + +  + R+ +
Sbjct: 24  EFNLNMAINSNTITNGLRYALATGNWGDQKKFMETRAGVSQVLNRYTFASTLSHLRRLNT 83

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 84  PIGREGKLAKPRQLHNTHWGMVCPAETP 111

[200][TOP]
>UniRef100_C4V8X8 DNA-directed RNA polymerase n=1 Tax=Nosema ceranae BRL01
           RepID=C4V8X8_NOSCE
          Length = 1143

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 34/87 (39%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++A  ++  TI  G   A+++GNW  +   M+ K GV QVL+R +F++ +  + R+ + 
Sbjct: 401 FNIALGLKASTIAQGFRYAIATGNWGDQAHAMQSKAGVAQVLNRYNFVSTLSHLRRVNTP 460

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
            EK  K++ PR LH + WGM+CPA+TP
Sbjct: 461 IEKEGKLAKPRQLHNTHWGMICPAETP 487

[201][TOP]
>UniRef100_A1YIE3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix
           frontalis RepID=A1YIE3_NEOFR
          Length = 915

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 35/88 (39%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIR-RFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           +F++  AIR +TI+ GL+ +L++GNW  + +F   R GV+QVL+R +F + +  + R+ +
Sbjct: 240 EFNLNSAIRPNTISDGLKYSLATGNWGAQSKFMQSRAGVSQVLNRYTFASTLSHLRRLNT 299

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 300 PIGRDGKLAKPRQLHNTHWGMVCPAETP 327

[202][TOP]
>UniRef100_A1YID6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus
           RepID=A1YID6_ALLMA
          Length = 896

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 37/88 (42%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTS 180
           +F++  AI ++TIT GL  AL++GNW  ++  ME R GV+QVL+R +F + +  + R+ +
Sbjct: 229 EFNLNMAINSNTITNGLRYALATGNWGDQKKFMETRAGVSQVLNRYTFASTLSHLRRLNT 288

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 289 PIGREGKLAKPRQLHNTHWGMVCPAETP 316

[203][TOP]
>UniRef100_A1YID5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Allomyces macrogynus
           RepID=A1YID5_ALLMA
          Length = 867

 Score = 76.6 bits (187), Expect = 8e-13
 Identities = 37/88 (42%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTS 180
           +F++  AI ++TIT GL  AL++GNW  ++  ME R GV+QVL+R +F + +  + R+ +
Sbjct: 229 EFNLNMAINSNTITNGLRYALATGNWGDQKKFMETRAGVSQVLNRYTFASTLSHLRRLNT 288

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 289 PIGREGKLAKPRQLHNTHWGMVCPAETP 316

[204][TOP]
>UniRef100_Q1L6E5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Callistemon
           subulatus RepID=Q1L6E5_9MYRT
          Length = 952

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 36/81 (44%), Positives = 54/81 (66%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL++ + +  + R+ S   +  K
Sbjct: 334 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLPHLRRLNSPIGREGK 393

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH SQWGM+CPA+TP
Sbjct: 394 LAKPRQLHNSQWGMMCPAETP 414

[205][TOP]
>UniRef100_Q1L6C3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Homalocladium
           platycladum RepID=Q1L6C3_9CARY
          Length = 875

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 36/81 (44%), Positives = 54/81 (66%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL++ + +  + R+ S   +  K
Sbjct: 334 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTYASTLSHLRRLNSPTGREGK 393

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH SQWGM+CPA+TP
Sbjct: 394 LAKPRQLHNSQWGMMCPAETP 414

[206][TOP]
>UniRef100_Q1L5Z4 DNA-directed RNA polymerase n=1 Tax=Nicotiana sylvestris
           RepID=Q1L5Z4_NICSY
          Length = 1203

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 36/81 (44%), Positives = 53/81 (65%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL+F + +  + R+ S   +  K
Sbjct: 452 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGK 511

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH S WGM+CPA+TP
Sbjct: 512 LAKPRQLHNSHWGMMCPAETP 532

[207][TOP]
>UniRef100_Q1L5Z2 DNA-directed RNA polymerase n=1 Tax=Petunia x hybrida
           RepID=Q1L5Z2_PETHY
          Length = 1203

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 36/81 (44%), Positives = 53/81 (65%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL+F + +  + R+ S   +  K
Sbjct: 452 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGK 511

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH S WGM+CPA+TP
Sbjct: 512 LAKPRQLHNSHWGMMCPAETP 532

[208][TOP]
>UniRef100_Q1L5Z1 DNA-directed RNA polymerase n=1 Tax=Solanum lycopersicum
           RepID=Q1L5Z1_SOLLC
          Length = 1205

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 36/81 (44%), Positives = 53/81 (65%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL+F + +  + R+ S   +  K
Sbjct: 457 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGK 516

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH S WGM+CPA+TP
Sbjct: 517 LAKPRQLHNSHWGMMCPAETP 537

[209][TOP]
>UniRef100_Q1L5B1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Liriodendron
           tulipifera RepID=Q1L5B1_LIRTU
          Length = 942

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 36/81 (44%), Positives = 53/81 (65%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL+F + +  + R+ S   +  K
Sbjct: 326 AIKAKTITSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGK 385

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH S WGM+CPA+TP
Sbjct: 386 LAKPRQLHNSHWGMMCPAETP 406

[210][TOP]
>UniRef100_Q0MX37 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Tilletia goloskokovii RepID=Q0MX37_9BASI
          Length = 355

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 36/87 (41%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTSQ 183
           F+++ AI++ TIT GL+ +L++GNW  ++  M+ K GV+QVL+R +F + +  + R  + 
Sbjct: 44  FNLSTAIKSATITNGLKYSLATGNWGDQKKAMQAKAGVSQVLNRYTFASTLSHLRRCNTP 103

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH S WGM+CPA+TP
Sbjct: 104 IGRDGKIAKPRQLHNSHWGMVCPAETP 130

[211][TOP]
>UniRef100_Q1L6E4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chimonanthus praecox
           RepID=Q1L6E4_9MAGN
          Length = 906

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 35/81 (43%), Positives = 53/81 (65%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  T+T GL+ +L++GNW        R GV+QVL+RL+F + +  + R+ S   +  K
Sbjct: 334 AIKAKTVTSGLKYSLATGNWGQANAAGTRAGVSQVLNRLTFASTLSHLRRLNSPIGREGK 393

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH S WGM+CPA+TP
Sbjct: 394 LAKPRQLHNSHWGMMCPAETP 414

[212][TOP]
>UniRef100_Q6RYG8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phragmidium sp. MB
           RepID=Q6RYG8_9BASI
          Length = 931

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 35/87 (40%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  A++++TIT GL+ +L++GNW  ++  M+ K GV+QVL+R +F + +  + R  + 
Sbjct: 239 FNLNAAVKSNTITNGLKYSLATGNWGDQKKAMQAKAGVSQVLNRYTFASTLSHLRRCNTP 298

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH S WGM+CPA+TP
Sbjct: 299 IGRDGKIAKPRQLHNSHWGMVCPAETP 325

[213][TOP]
>UniRef100_Q308L1 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Endocronartium harknessii RepID=Q308L1_9BASI
          Length = 299

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 35/87 (40%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  A++++TIT GL+ +L++GNW  ++  M+ R GV+QVL+R +F + +  + R  + 
Sbjct: 22  FNLNTAVKSNTITNGLKYSLATGNWGDQKKAMQARAGVSQVLNRYTFASTLSHLRRCNTP 81

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH S WGM+CPA+TP
Sbjct: 82  IGRDGKIAKPRQLHNSHWGMVCPAETP 108

[214][TOP]
>UniRef100_Q2I5U8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coelomomyces
           stegomyiae RepID=Q2I5U8_9FUNG
          Length = 1080

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 37/87 (42%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  AI ++TIT GL  AL++GNW  ++  ME R GV+QVL+R +F + +  + R+ + 
Sbjct: 40  FNLNMAINSNTITNGLRYALATGNWGDQKKFMETRAGVSQVLNRYTFASTLSHLRRLNTP 99

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH + WGM+CPA+TP
Sbjct: 100 IGREGKLAKPRQLHNTHWGMVCPAETP 126

[215][TOP]
>UniRef100_Q2I5T8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Endogone pisiformis
           RepID=Q2I5T8_9FUNG
          Length = 720

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 34/88 (38%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTS 180
           +F++  A++++TIT GL+ +L++GNW  ++  M+ K GV+QVL+R +F + +  + R  +
Sbjct: 39  EFNLTLAVKSNTITNGLKYSLATGNWGDQKKAMQSKAGVSQVLNRYTFASTLSHLRRCNT 98

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 99  PIGRDGKIAKPRQLHNTHWGMVCPAETP 126

[216][TOP]
>UniRef100_Q2I5T7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum
           RepID=Q2I5T7_9FUNG
          Length = 720

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 34/88 (38%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTS 180
           +F++  A++++TIT GL+ +L++GNW  ++  M+ R GV+QVL+R +F + +  + R  +
Sbjct: 39  EFNLTLAVKSNTITNGLKYSLATGNWGDQKKAMQARAGVSQVLNRYTFASTLSHLRRCNT 98

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 99  PIGRDGKIAKPRQLHNTHWGMVCPAETP 126

[217][TOP]
>UniRef100_Q0MT74 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Wallemia ichthyophaga RepID=Q0MT74_WALIC
          Length = 365

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 34/88 (38%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           +F++ +A++ +TIT GL+ +L++GNW   ++F   R GV+QVL+R +F + +  + R  +
Sbjct: 40  EFNLNQAVKANTITNGLKYSLATGNWGDQKKFMQARAGVSQVLNRYTFASTLSHLRRCNT 99

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA TP
Sbjct: 100 PIGRDGKIAKPRQLHNTHWGMVCPAXTP 127

[218][TOP]
>UniRef100_B3XZD8 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Polyporus tubiformis RepID=B3XZD8_9APHY
          Length = 286

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 34/88 (38%), Positives = 60/88 (68%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTS 180
           +FD+++A++  TIT GL+ +L++GNW  ++  M  K GV+QVL+R ++ + +  + R  +
Sbjct: 26  EFDLSRAVKHTTITNGLKYSLATGNWGDQKKSMSAKAGVSQVLNRYTYASTLSHLRRCNT 85

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 86  PLGREGKIAKPRQLHNTHWGMVCPAETP 113

[219][TOP]
>UniRef100_A1YID8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coelomomyces
           stegomyiae RepID=A1YID8_9FUNG
          Length = 862

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 37/87 (42%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  AI ++TIT GL  AL++GNW  ++  ME R GV+QVL+R +F + +  + R+ + 
Sbjct: 230 FNLNMAINSNTITNGLRYALATGNWGDQKKFMETRAGVSQVLNRYTFASTLSHLRRLNTP 289

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH + WGM+CPA+TP
Sbjct: 290 IGREGKLAKPRQLHNTHWGMVCPAETP 316

[220][TOP]
>UniRef100_A1YID1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum
           RepID=A1YID1_9FUNG
          Length = 883

 Score = 75.9 bits (185), Expect = 1e-12
 Identities = 34/88 (38%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTS 180
           +F++  A++++TIT GL+ +L++GNW  ++  M+ R GV+QVL+R +F + +  + R  +
Sbjct: 233 EFNLTLAVKSNTITNGLKYSLATGNWGDQKKAMQARAGVSQVLNRYTFASTLSHLRRCNT 292

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 293 PIGRDGKIAKPRQLHNTHWGMVCPAETP 320

[221][TOP]
>UniRef100_UPI0001865901 hypothetical protein BRAFLDRAFT_125505 n=1 Tax=Branchiostoma
           floridae RepID=UPI0001865901
          Length = 1176

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  AI+T  IT GL+ +L++GNW   ++    R GV+QVL+RL+F + +  + R+ S 
Sbjct: 431 FNLELAIKTRIITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSP 490

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH S WGM+CPA+TP
Sbjct: 491 IGRDGKLAKPRQLHNSLWGMICPAETP 517

[222][TOP]
>UniRef100_Q1L5B4 DNA-directed RNA polymerase n=1 Tax=Rhododendron macrophyllum
           RepID=Q1L5B4_RHOMC
          Length = 1207

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 35/81 (43%), Positives = 53/81 (65%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW        R GV+QVL+RL++ + +  + R+ S   +  K
Sbjct: 456 AIKAKTITSGLKYSLATGNWGQANSAGSRAGVSQVLNRLTYASTLSHLRRLNSPIGREGK 515

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH S WGM+CPA+TP
Sbjct: 516 LAKPRQLHNSHWGMMCPAETP 536

[223][TOP]
>UniRef100_Q01GR3 DNA-directed RNA polymerase n=1 Tax=Ostreococcus tauri
           RepID=Q01GR3_OSTTA
          Length = 999

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 36/81 (44%), Positives = 55/81 (67%)
 Frame = +1

Query: 22  AIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFEKTRK 201
           AI+  TIT GL+ +L++GNW  +  +  R GV+QVL+RLS+ + +  + R+ S   +  K
Sbjct: 277 AIKAKTITQGLKYSLATGNWGSQGAQDIRAGVSQVLNRLSYSSTLSHLRRINSPIGREGK 336

Query: 202 VSGPRALHPSQWGMLCPADTP 264
           ++ PR LH S WGM+CPA+TP
Sbjct: 337 LAKPRQLHNSLWGMICPAETP 357

[224][TOP]
>UniRef100_Q27826 DNA-directed RNA polymerase n=1 Tax=Euplotes octocarinatus
           RepID=Q27826_EUPOC
          Length = 1194

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 34/86 (39%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRF-RMERKGVTQVLSRLSFIAAMGMMTRMTSQF 186
           ++ KA + D I+ GL+ AL++GNW       + + GV+QVL+RL+F + +  + R+ +  
Sbjct: 456 NITKAFKKDIISDGLKYALATGNWGTNAAGEVSKTGVSQVLNRLTFASTLSHLRRLNTPL 515

Query: 187 EKTRKVSGPRALHPSQWGMLCPADTP 264
           +K+ K++ PR LH + WGM+CPA+TP
Sbjct: 516 QKSGKLTKPRQLHNTHWGMVCPAETP 541

[225][TOP]
>UniRef100_C4LUK7 DNA-directed RNA polymerase n=1 Tax=Entamoeba histolytica HM-1:IMSS
           RepID=C4LUK7_ENTHI
          Length = 1170

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 37/85 (43%), Positives = 51/85 (60%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           + AK +   TIT     AL +GNW     +  R GV QVLSRL+F +A+  + +++S  E
Sbjct: 421 EYAKPLSFPTITTDFTKALGTGNWPQPGGKESRHGVAQVLSRLTFTSALAYLRKISSPVE 480

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
             RK   PR LH +QWG +CPA+TP
Sbjct: 481 GKRKTQKPRQLHNTQWGYICPAETP 505

[226][TOP]
>UniRef100_C3Y5U9 DNA-directed RNA polymerase n=1 Tax=Branchiostoma floridae
           RepID=C3Y5U9_BRAFL
          Length = 1104

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  AI+T  IT GL+ +L++GNW   ++    R GV+QVL+RL+F + +  + R+ S 
Sbjct: 431 FNLELAIKTRIITDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRLNSP 490

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH S WGM+CPA+TP
Sbjct: 491 IGRDGKLAKPRQLHNSLWGMICPAETP 517

[227][TOP]
>UniRef100_B4R0H5 DNA-directed RNA polymerase n=1 Tax=Drosophila simulans
           RepID=B4R0H5_DROSI
          Length = 1176

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  AI+T+ IT GL  +L++GNW   ++    R GV+QVL+RL+F + +  + R+ S 
Sbjct: 430 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 489

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH + WGMLCPA+TP
Sbjct: 490 IGRDGKLAKPRQLHNTLWGMLCPAETP 516

[228][TOP]
>UniRef100_B4PTC0 DNA-directed RNA polymerase n=1 Tax=Drosophila yakuba
           RepID=B4PTC0_DROYA
          Length = 1176

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  AI+T+ IT GL  +L++GNW   ++    R GV+QVL+RL+F + +  + R+ S 
Sbjct: 430 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 489

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH + WGMLCPA+TP
Sbjct: 490 IGRDGKLAKPRQLHNTLWGMLCPAETP 516

[229][TOP]
>UniRef100_B4N9I3 DNA-directed RNA polymerase n=1 Tax=Drosophila willistoni
           RepID=B4N9I3_DROWI
          Length = 1176

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  AI+T+ IT GL  +L++GNW   ++    R GV+QVL+RL+F + +  + R+ S 
Sbjct: 430 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 489

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH + WGMLCPA+TP
Sbjct: 490 IGRDGKLAKPRQLHNTLWGMLCPAETP 516

[230][TOP]
>UniRef100_B4M040 DNA-directed RNA polymerase n=1 Tax=Drosophila virilis
           RepID=B4M040_DROVI
          Length = 1176

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  AI+T+ IT GL  +L++GNW   ++    R GV+QVL+RL+F + +  + R+ S 
Sbjct: 430 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 489

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH + WGMLCPA+TP
Sbjct: 490 IGRDGKLAKPRQLHNTLWGMLCPAETP 516

[231][TOP]
>UniRef100_B4KDW5 DNA-directed RNA polymerase n=1 Tax=Drosophila mojavensis
           RepID=B4KDW5_DROMO
          Length = 1176

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  AI+T+ IT GL  +L++GNW   ++    R GV+QVL+RL+F + +  + R+ S 
Sbjct: 430 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 489

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH + WGMLCPA+TP
Sbjct: 490 IGRDGKLAKPRQLHNTLWGMLCPAETP 516

[232][TOP]
>UniRef100_B4K015 DNA-directed RNA polymerase n=1 Tax=Drosophila grimshawi
           RepID=B4K015_DROGR
          Length = 1175

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  AI+T+ IT GL  +L++GNW   ++    R GV+QVL+RL+F + +  + R+ S 
Sbjct: 429 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 488

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH + WGMLCPA+TP
Sbjct: 489 IGRDGKLAKPRQLHNTLWGMLCPAETP 515

[233][TOP]
>UniRef100_Q298X6 DNA-directed RNA polymerase n=2 Tax=pseudoobscura subgroup
           RepID=Q298X6_DROPS
          Length = 1176

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  AI+T+ IT GL  +L++GNW   ++    R GV+QVL+RL+F + +  + R+ S 
Sbjct: 430 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 489

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH + WGMLCPA+TP
Sbjct: 490 IGRDGKLAKPRQLHNTLWGMLCPAETP 516

[234][TOP]
>UniRef100_B3P0M0 DNA-directed RNA polymerase n=1 Tax=Drosophila erecta
           RepID=B3P0M0_DROER
          Length = 1176

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  AI+T+ IT GL  +L++GNW   ++    R GV+QVL+RL+F + +  + R+ S 
Sbjct: 430 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 489

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH + WGMLCPA+TP
Sbjct: 490 IGRDGKLAKPRQLHNTLWGMLCPAETP 516

[235][TOP]
>UniRef100_B3LYR3 DNA-directed RNA polymerase n=1 Tax=Drosophila ananassae
           RepID=B3LYR3_DROAN
          Length = 1176

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  AI+T+ IT GL  +L++GNW   ++    R GV+QVL+RL+F + +  + R+ S 
Sbjct: 430 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 489

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH + WGMLCPA+TP
Sbjct: 490 IGRDGKLAKPRQLHNTLWGMLCPAETP 516

[236][TOP]
>UniRef100_B0EG45 DNA-directed RNA polymerase n=1 Tax=Entamoeba dispar SAW760
           RepID=B0EG45_ENTDI
          Length = 1170

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 37/85 (43%), Positives = 51/85 (60%)
 Frame = +1

Query: 10  DVAKAIRTDTITYGLESALSSGNWIIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQFE 189
           + AK +   TIT     AL +GNW     +  R GV QVLSRL+F +A+  + +++S  E
Sbjct: 421 EYAKPLSFPTITSDFTKALGTGNWPQPGGKESRHGVAQVLSRLTFTSALAYLRKISSPVE 480

Query: 190 KTRKVSGPRALHPSQWGMLCPADTP 264
             RK   PR LH +QWG +CPA+TP
Sbjct: 481 GKRKTQKPRQLHNTQWGYICPAETP 505

[237][TOP]
>UniRef100_Q6RYG2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ustilago maydis
           RepID=Q6RYG2_USTMA
          Length = 887

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTS 180
           +F +  A+++ TIT GL  +L++GNW  ++  M+ K GV+QVL+R +F + +  + R  +
Sbjct: 236 EFHIQAAVKSSTITNGLRYSLATGNWGDQKKAMQAKAGVSQVLNRFAFASTLSHLRRTNT 295

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 296 PIGRDGKIAKPRQLHNTHWGMVCPAETP 323

[238][TOP]
>UniRef100_Q5RLZ8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tilletiaria anomala
           RepID=Q5RLZ8_9BASI
          Length = 605

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 33/87 (37%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F +++A++  TIT GL+ ++++GNW   ++F   R GV+QVL+R +F + +  + R  + 
Sbjct: 40  FHISQAVKAATITNGLKYSIATGNWGDQKKFMQARAGVSQVLNRYTFASTLSHLRRCNTP 99

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH + WGM+CPA+TP
Sbjct: 100 IGRDGKIAKPRQLHNTHWGMVCPAETP 126

[239][TOP]
>UniRef100_Q308L3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cintractia
           sorghi-vulgaris RepID=Q308L3_9BASI
          Length = 676

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTS 180
           +F +  A+++ TIT GL  +L++GNW  ++  M+ K GV+QVL+R +F + +  + R  +
Sbjct: 39  EFHIQAAVKSSTITNGLRYSLATGNWGDQKKAMQAKAGVSQVLNRFAFASTLSHLRRTNT 98

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 99  PIGRDGKIAKPRQLHNTHWGMVCPAETP 126

[240][TOP]
>UniRef100_Q2I5U1 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Spizellomyces punctatus RepID=Q2I5U1_SPIPN
          Length = 721

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 34/88 (38%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           +F++  AI+  TIT GL+ +L++GNW   ++F   R GV+QVL+R ++ + +  + R+ +
Sbjct: 39  EFNLTMAIKGGTITRGLQYSLATGNWGDQKKFMQARAGVSQVLNRYTYASTLSHLRRLNT 98

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 99  PIGRDGKLAKPRQLHNTHWGMVCPAETP 126

[241][TOP]
>UniRef100_Q0PIL9 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Moesziomyces bullatus RepID=Q0PIL9_9BASI
          Length = 355

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTS 180
           +F +  A+++ TIT GL  +L++GNW  ++  M+ K GV+QVL+R +F + +  + R  +
Sbjct: 40  EFHIQAAVKSSTITNGLRYSLATGNWGDQKKAMQAKAGVSQVLNRFAFASTLSHLRRTNT 99

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 100 PIGRDGKIAKPRQLHNTHWGMVCPAETP 127

[242][TOP]
>UniRef100_Q0MX48 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Sakaguchia dacryoidea RepID=Q0MX48_9BASI
          Length = 362

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 36/87 (41%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTSQ 183
           F +  AI+ +TIT GL+ +L++GNW  ++  M+ K GV+QVL+R +F + +  + R  + 
Sbjct: 47  FHLENAIKPNTITNGLKYSLATGNWGDQKKAMQAKAGVSQVLNRYTFASTLSHLRRCNTP 106

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH S WGM+CPA+TP
Sbjct: 107 IGRDGKIAKPRQLHNSHWGMVCPAETP 133

[243][TOP]
>UniRef100_Q0MX40 DNA-directed RNA polymerase (Fragment) n=1 Tax=Sporisorium
           reilianum RepID=Q0MX40_9BASI
          Length = 608

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTS 180
           +F +  A+++ TIT GL  +L++GNW  ++  M+ K GV+QVL+R +F + +  + R  +
Sbjct: 43  EFHIQAAVKSSTITNGLRYSLATGNWGDQKKAMQAKAGVSQVLNRFAFASTLSHLRRTNT 102

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 103 PIGRDGKIAKPRQLHNTHWGMVCPAETP 130

[244][TOP]
>UniRef100_Q0MTB7 RNA polymerase II second largest subunit (Fragment) n=1
           Tax=Ustanciosporium standleyanum RepID=Q0MTB7_9BASI
          Length = 358

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTS 180
           +F +  A+++ TIT GL  +L++GNW  ++  M+ K GV+QVL+R +F + +  + R  +
Sbjct: 46  EFHIQAAVKSSTITNGLRYSLATGNWGDQKKAMQAKAGVSQVLNRFAFASTLSHLRRTNT 105

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 106 PIGRDGKIAKPRQLHNTHWGMVCPAETP 133

[245][TOP]
>UniRef100_Q0MTB4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ustilago tritici
           RepID=Q0MTB4_9BASI
          Length = 635

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 34/88 (38%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRMERK-GVTQVLSRLSFIAAMGMMTRMTS 180
           +F +  A+++ TIT GL  +L++GNW  ++  M+ K GV+QVL+R +F + +  + R  +
Sbjct: 43  EFHIQAAVKSSTITNGLRYSLATGNWGDQKKAMQAKAGVSQVLNRFAFASTLSHLRRTNT 102

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 103 PIGRDGKIAKPRQLHNTHWGMVCPAETP 130

[246][TOP]
>UniRef100_A1YIE2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Monoblepharis
           macrandra RepID=A1YIE2_9FUNG
          Length = 879

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 35/88 (39%), Positives = 59/88 (67%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTS 180
           +F++  A++   IT GL+ +L++GNW  +R  M+ R GV+QVLSR ++ + +  + R+ S
Sbjct: 236 EFNMVSAVQHQIITRGLQFSLATGNWGDQRKMMQTRAGVSQVLSRYTYASTLSHLRRLNS 295

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 296 PIGREGKLAKPRQLHNTHWGMVCPAETP 323

[247][TOP]
>UniRef100_A1YID9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Entophlyctis
           confervae-glomeratae RepID=A1YID9_9FUNG
          Length = 886

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 33/88 (37%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTS 180
           +F++A A+++ TIT GL+ +L++GNW   ++F   + GV+QVL+R ++ + +  + R+ +
Sbjct: 237 EFNLAMALKSATITKGLQYSLATGNWGDQKKFMSAKAGVSQVLNRYTYASTLSHLRRLNT 296

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WGM+CPA+TP
Sbjct: 297 PIGRDGKLAKPRQLHNTHWGMVCPAETP 324

[248][TOP]
>UniRef100_A1YIC9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Furculomyces
           boomerangus RepID=A1YIC9_9FUNG
          Length = 906

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 34/88 (38%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4   QFDVAKAIRTDTITYGLESALSSGNWIIRRFRME-RKGVTQVLSRLSFIAAMGMMTRMTS 180
           +F++  AI+++TIT GL+ +L++GNW  ++  M+ R GV+QVL+R +F + +  + R  +
Sbjct: 235 EFNLTMAIKSNTITAGLKYSLATGNWGDQKKSMQSRTGVSQVLNRYTFASTLSHLRRCNT 294

Query: 181 QFEKTRKVSGPRALHPSQWGMLCPADTP 264
              +  K++ PR LH + WG++CPA+TP
Sbjct: 295 PIGRDGKIAKPRQLHNTHWGLVCPAETP 322

[249][TOP]
>UniRef100_P08266 DNA-directed RNA polymerase II subunit RPB2 n=2 Tax=melanogaster
           subgroup RepID=RPB2_DROME
          Length = 1176

 Score = 75.5 bits (184), Expect = 2e-12
 Identities = 37/87 (42%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F++  AI+T+ IT GL  +L++GNW   ++    R GV+QVL+RL+F + +  + R+ S 
Sbjct: 430 FNLELAIKTNIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLSHLRRVNSP 489

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH + WGMLCPA+TP
Sbjct: 490 IGRDGKLAKPRQLHNTLWGMLCPAETP 516

[250][TOP]
>UniRef100_UPI0000221AC5 hypothetical protein CBG18197 n=1 Tax=Caenorhabditis briggsae AF16
           RepID=UPI0000221AC5
          Length = 1194

 Score = 75.1 bits (183), Expect = 2e-12
 Identities = 36/87 (41%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
 Frame = +1

Query: 7   FDVAKAIRTDTITYGLESALSSGNW-IIRRFRMERKGVTQVLSRLSFIAAMGMMTRMTSQ 183
           F +   ++T TIT GL  +L++GNW   ++    R GV+QVL+RL++ A +  + R  S 
Sbjct: 436 FALDVCVKTSTITRGLAYSLATGNWGDQKKAHQSRAGVSQVLNRLTYTATLSHLRRANSP 495

Query: 184 FEKTRKVSGPRALHPSQWGMLCPADTP 264
             +  K++ PR LH +QWGM+CPA+TP
Sbjct: 496 IGREGKLAKPRQLHNTQWGMVCPAETP 522