AV639034 ( HC094b09_r )

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[1][TOP]
>UniRef100_P12852 Oxygen-evolving enhancer protein 3, chloroplastic n=2
           Tax=Chlamydomonas reinhardtii RepID=PSBQ_CHLRE
          Length = 199

 Score =  140 bits (354), Expect = 3e-32
 Identities = 92/136 (67%), Positives = 92/136 (67%), Gaps = 6/136 (4%)
 Frame = +3

Query: 3   KVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKGCPGSDP------RSTCS 164
           KVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPK      P      RS   
Sbjct: 6   KVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDDRSVRD 65

Query: 165 MTARFATAAST*STRPATWTCPRTSARASPRLALPWDETKKRVKESEARIDADLDVFIQK 344
                   A      P       T ARAS       DETKKRVKESEARIDADLDVFIQK
Sbjct: 66  RGFDLIYEARDLDL-PQNVREGFTQARAS------LDETKKRVKESEARIDADLDVFIQK 118

Query: 345 SYWTEAREQLRRQVGT 392
           SYWTEAREQLRRQVGT
Sbjct: 119 SYWTEAREQLRRQVGT 134

[2][TOP]
>UniRef100_Q1WLV1 Chloroplast oxygen-evolving protein 3 n=1 Tax=Chlamydomonas incerta
           RepID=Q1WLV1_CHLIN
          Length = 200

 Score =  135 bits (341), Expect = 1e-30
 Identities = 89/136 (65%), Positives = 92/136 (67%), Gaps = 7/136 (5%)
 Frame = +3

Query: 3   KVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKGCPGS-------DPRSTC 161
           KVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPK    +       D RS  
Sbjct: 6   KVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAAFAAATPVDLFDDRSAR 65

Query: 162 SMTARFATAAST*STRPATWTCPRTSARASPRLALPWDETKKRVKESEARIDADLDVFIQ 341
                    A      P       T ARAS       +ETKKRVKESEARIDADLDVFI+
Sbjct: 66  ERGFDLIYEARD-LDLPQNVREGFTQARAS------LEETKKRVKESEARIDADLDVFIK 118

Query: 342 KSYWTEAREQLRRQVG 389
           KSYWTEAREQLRRQVG
Sbjct: 119 KSYWTEAREQLRRQVG 134

[3][TOP]
>UniRef100_Q41643 Oxygen-evolving enhancer protein 3, chloroplastic n=1 Tax=Volvox
           carteri RepID=PSBQ_VOLCA
          Length = 202

 Score =  108 bits (269), Expect = 2e-22
 Identities = 71/135 (52%), Positives = 82/135 (60%), Gaps = 5/135 (3%)
 Frame = +3

Query: 3   KVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKGCPGSDPRSTCSMTARFA 182
           KVA+RPAVASRRG VVVRAS ESRRAVLGGLLAS V A+       +  ++  +    F 
Sbjct: 6   KVASRPAVASRRGVVVVRASVESRRAVLGGLLASTVVALTS----ANKAQAAATPVDLFD 61

Query: 183 TAAST*STRPATWTCPRTSARASPRLALPW-----DETKKRVKESEARIDADLDVFIQKS 347
                 +     +       R S R  L       D T KRVKESE RIDADL+ FI+K+
Sbjct: 62  DRKVRETGFDLIYEARDLDLRQSARDGLDQARGSIDATIKRVKESETRIDADLEGFIKKN 121

Query: 348 YWTEAREQLRRQVGT 392
           YWTEAREQLRRQVGT
Sbjct: 122 YWTEAREQLRRQVGT 136

[4][TOP]
>UniRef100_B5A4I8 Photosystem II oxygen evolving enhancer protein 3 n=1
           Tax=Gymnochlora stellata RepID=B5A4I8_GYMST
          Length = 222

 Score = 56.6 bits (135), Expect(2) = 7e-13
 Identities = 25/39 (64%), Positives = 30/39 (76%)
 Frame = +2

Query: 155 DLFDDRSVRDRGFDLIYEARDLDLPQNVREGFTQARASL 271
           DL DDR  +  GFD+IYEARDL L Q+ R+GFTQAR+ L
Sbjct: 81  DLIDDRKAKSTGFDIIYEARDLSLDQDTRDGFTQARSGL 119

 Score = 40.4 bits (93), Expect(2) = 7e-13
 Identities = 19/39 (48%), Positives = 25/39 (64%)
 Frame = +3

Query: 276 ETKKRVKESEARIDADLDVFIQKSYWTEAREQLRRQVGT 392
           ETK RV ++E ++  +   F+ K YWTE R  LRR VGT
Sbjct: 121 ETKTRVMDAEKKL-TEAGAFVDKKYWTEGRNVLRRLVGT 158

[5][TOP]
>UniRef100_C1EI28 Oxygen-evolving enhancer protein 3, chloroplast n=1 Tax=Micromonas
           sp. RCC299 RepID=C1EI28_9CHLO
          Length = 205

 Score = 43.5 bits (101), Expect(2) = 9e-08
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = +3

Query: 276 ETKKRVKESEARIDADLDVFIQKSYWTEAREQLRRQVGT 392
           +T  R  ES  R++ D+  ++ K+YWT+A  +LRRQVGT
Sbjct: 107 QTATRASESIKRLNTDVGEYVGKAYWTQAANELRRQVGT 145

 Score = 36.2 bits (82), Expect(2) = 9e-08
 Identities = 15/31 (48%), Positives = 22/31 (70%)
 Frame = +2

Query: 152 VDLFDDRSVRDRGFDLIYEARDLDLPQNVRE 244
           ++L D+R     G  LIYEARDL++ Q+VR+
Sbjct: 62  IELQDERQTNKNGLQLIYEARDLNITQSVRQ 92

[6][TOP]
>UniRef100_A4S8C8 PsbQ, PSII-Q, OEE3, photosystem II polypeptide, oxygen evolving
           enhancer 3 n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4S8C8_OSTLU
          Length = 204

 Score = 45.1 bits (105), Expect(2) = 7e-07
 Identities = 20/39 (51%), Positives = 26/39 (66%)
 Frame = +3

Query: 276 ETKKRVKESEARIDADLDVFIQKSYWTEAREQLRRQVGT 392
           ET  R  ES  RI+ D+  ++ K YWT+A  +LRRQVGT
Sbjct: 106 ETAARATESVTRINKDVGEYVGKKYWTQASNELRRQVGT 144

 Score = 31.6 bits (70), Expect(2) = 7e-07
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +2

Query: 152 VDLFDDRSVRDRGFDLIYEARDLDLPQNVR 241
           ++L D R     G  LIYEARDL+L Q  R
Sbjct: 61  IELTDKRVENQTGLQLIYEARDLELDQKPR 90

[7][TOP]
>UniRef100_UPI000179CC90 UPI000179CC90 related cluster n=1 Tax=Bos taurus
           RepID=UPI000179CC90
          Length = 2724

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 48/135 (35%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
 Frame = -3

Query: 381 GGAAAREPQ-----SSRTSG*TRPGQRRCGPQTPSRASWSRPREARAWVKPSRTFWGRSR 217
           G + +R PQ     S++  G +R  QRR   ++P R  WSR R A+   +      GRS 
Sbjct: 500 GHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGRSRSARRGRSH 559

Query: 216 SRAS*IRSKPRSRTE----RSSNRSTGGQSQGSPWGPRRRQRSPADRPAPRGATR----- 64
           SR+   R + RSRT     RS +R+   +   S    RRR RS    PA RG +R     
Sbjct: 560 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRT--PARRGRSRSRTPA 617

Query: 63  RRRAQPRHPGGRPRR 19
           RRR++ R P  R  R
Sbjct: 618 RRRSRTRSPVRRRSR 632

[8][TOP]
>UniRef100_UPI0000DC1A1B UPI0000DC1A1B related cluster n=1 Tax=Rattus norvegicus
           RepID=UPI0000DC1A1B
          Length = 491

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
 Frame = -3

Query: 381 GGAAAREPQ-----SSRTSG*TRPGQRRCGPQTPSRASWSRPREARAWVKPSRTFWGRSR 217
           G + +R PQ     S++  G +R  QRR   ++P R  WSR R  +   +      GRS 
Sbjct: 193 GHSRSRSPQWRRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 252

Query: 216 SRAS*IRSKPRSRTE----RSSNRSTGGQSQGSPWGPRRRQRSPADRPAPRGATR----- 64
           SR+   R + RSRT     RS +R+   +   S    RRR RS    PA RG +R     
Sbjct: 253 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRT--PARRGRSRSRTPT 310

Query: 63  RRRAQPRHPGGRPRR 19
           RRR++ R P  R  R
Sbjct: 311 RRRSRTRSPVRRRSR 325

[9][TOP]
>UniRef100_UPI0000DA333B PREDICTED: similar to serine/arginine repetitive matrix 2 n=1
           Tax=Rattus norvegicus RepID=UPI0000DA333B
          Length = 2707

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
 Frame = -3

Query: 381 GGAAAREPQ-----SSRTSG*TRPGQRRCGPQTPSRASWSRPREARAWVKPSRTFWGRSR 217
           G + +R PQ     S++  G +R  QRR   ++P R  WSR R  +   +      GRS 
Sbjct: 500 GHSRSRSPQWRRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 559

Query: 216 SRAS*IRSKPRSRTE----RSSNRSTGGQSQGSPWGPRRRQRSPADRPAPRGATR----- 64
           SR+   R + RSRT     RS +R+   +   S    RRR RS    PA RG +R     
Sbjct: 560 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRT--PARRGRSRSRTPT 617

Query: 63  RRRAQPRHPGGRPRR 19
           RRR++ R P  R  R
Sbjct: 618 RRRSRTRSPVRRRSR 632

[10][TOP]
>UniRef100_UPI0000484FB6 serine/arginine repetitive matrix 2 n=2 Tax=Mus musculus
           RepID=UPI0000484FB6
          Length = 2703

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
 Frame = -3

Query: 381 GGAAAREPQ-----SSRTSG*TRPGQRRCGPQTPSRASWSRPREARAWVKPSRTFWGRSR 217
           G + +R PQ     S++  G +R  QRR   ++P R  WSR R  +   +      GRS 
Sbjct: 501 GHSRSRSPQWRRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 560

Query: 216 SRAS*IRSKPRSRTE----RSSNRSTGGQSQGSPWGPRRRQRSPADRPAPRGATR----- 64
           SR+   R + RSRT     RS +R+   +   S    RRR RS    PA RG +R     
Sbjct: 561 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRT--PARRGRSRSRTPA 618

Query: 63  RRRAQPRHPGGRPRR 19
           RRR++ R P  R  R
Sbjct: 619 RRRSRTRSPVRRRSR 633

[11][TOP]
>UniRef100_UPI000184A2B2 Serine/arginine repetitive matrix protein 2 (Serine/arginine-rich
           splicing factor-related nuclear matrix protein of 300
           kDa) (Ser/Arg- related nuclear matrix protein)
           (SR-related nuclear matrix protein of 300 kDa) (Splicing
           coactivator subunit SRm300) (30 n=1 Tax=Canis lupus
           familiaris RepID=UPI000184A2B2
          Length = 2682

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
 Frame = -3

Query: 381 GGAAAREPQ-----SSRTSG*TRPGQRRCGPQTPSRASWSRPREARAWVKPSRTFWGRSR 217
           G + +R PQ     S++  G +R  QRR   ++P R  WSR R  +   +      GRS 
Sbjct: 436 GHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 495

Query: 216 SRAS*IRSKPRSRT----ERSSNRSTGGQSQGSPWGPRRRQRSPADRPAPRGATR----- 64
           SR+   R + RSRT     RS +R+   +   S    RRR RS    PA RG +R     
Sbjct: 496 SRSPATRGRSRSRTPARRARSRSRTPARRRSRSRTPARRRSRSRT--PARRGRSRSRTPA 553

Query: 63  RRRAQPRHPGGRPRR 19
           RRR++ R P  R  R
Sbjct: 554 RRRSRTRSPVRRRSR 568

[12][TOP]
>UniRef100_Q9UQ39 RNA binding protein (Fragment) n=1 Tax=Homo sapiens
           RepID=Q9UQ39_HUMAN
          Length = 956

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
 Frame = -3

Query: 381 GGAAAREPQ-----SSRTSG*TRPGQRRCGPQTPSRASWSRPREARAWVKPSRTFWGRSR 217
           G + +R PQ     S++  G +R  QRR   ++P R  WSR R  +   +      GRS 
Sbjct: 469 GHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 528

Query: 216 SRAS*IRSKPRSRTE----RSSNRSTGGQSQGSPWGPRRRQRSPADRPAPRGATR----- 64
           SR+   R + RSRT     RS +R+   +   S    RRR RS    PA RG +R     
Sbjct: 529 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRT--PARRGRSRSRTPA 586

Query: 63  RRRAQPRHPGGRPRR 19
           RRR++ R P  R  R
Sbjct: 587 RRRSRTRSPVRRRSR 601

[13][TOP]
>UniRef100_Q8BTI8-3 Isoform 3 of Serine/arginine repetitive matrix protein 2 n=1
           Tax=Mus musculus RepID=Q8BTI8-3
          Length = 2603

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
 Frame = -3

Query: 381 GGAAAREPQ-----SSRTSG*TRPGQRRCGPQTPSRASWSRPREARAWVKPSRTFWGRSR 217
           G + +R PQ     S++  G +R  QRR   ++P R  WSR R  +   +      GRS 
Sbjct: 501 GHSRSRSPQWRRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 560

Query: 216 SRAS*IRSKPRSRTE----RSSNRSTGGQSQGSPWGPRRRQRSPADRPAPRGATR----- 64
           SR+   R + RSRT     RS +R+   +   S    RRR RS    PA RG +R     
Sbjct: 561 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRT--PARRGRSRSRTPT 618

Query: 63  RRRAQPRHPGGRPRR 19
           RRR++ R P  R  R
Sbjct: 619 RRRSRTRSPVRRRSR 633

[14][TOP]
>UniRef100_Q8BTI8 Serine/arginine repetitive matrix protein 2 n=2 Tax=Mus musculus
           RepID=SRRM2_MOUSE
          Length = 2703

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
 Frame = -3

Query: 381 GGAAAREPQ-----SSRTSG*TRPGQRRCGPQTPSRASWSRPREARAWVKPSRTFWGRSR 217
           G + +R PQ     S++  G +R  QRR   ++P R  WSR R  +   +      GRS 
Sbjct: 501 GHSRSRSPQWRRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 560

Query: 216 SRAS*IRSKPRSRTE----RSSNRSTGGQSQGSPWGPRRRQRSPADRPAPRGATR----- 64
           SR+   R + RSRT     RS +R+   +   S    RRR RS    PA RG +R     
Sbjct: 561 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRT--PARRGRSRSRTPT 618

Query: 63  RRRAQPRHPGGRPRR 19
           RRR++ R P  R  R
Sbjct: 619 RRRSRTRSPVRRRSR 633

[15][TOP]
>UniRef100_Q9UQ35-2 Isoform 2 of Serine/arginine repetitive matrix protein 2 n=1
           Tax=Homo sapiens RepID=Q9UQ35-2
          Length = 2334

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
 Frame = -3

Query: 381 GGAAAREPQ-----SSRTSG*TRPGQRRCGPQTPSRASWSRPREARAWVKPSRTFWGRSR 217
           G + +R PQ     S++  G +R  QRR   ++P R  WSR R  +   +      GRS 
Sbjct: 504 GHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 563

Query: 216 SRAS*IRSKPRSRTE----RSSNRSTGGQSQGSPWGPRRRQRSPADRPAPRGATR----- 64
           SR+   R + RSRT     RS +R+   +   S    RRR RS    PA RG +R     
Sbjct: 564 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRT--PARRGRSRSRTPA 621

Query: 63  RRRAQPRHPGGRPRR 19
           RRR++ R P  R  R
Sbjct: 622 RRRSRTRSPVRRRSR 636

[16][TOP]
>UniRef100_Q9UQ35 Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo sapiens
           RepID=SRRM2_HUMAN
          Length = 2752

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 47/135 (34%), Positives = 64/135 (47%), Gaps = 14/135 (10%)
 Frame = -3

Query: 381 GGAAAREPQ-----SSRTSG*TRPGQRRCGPQTPSRASWSRPREARAWVKPSRTFWGRSR 217
           G + +R PQ     S++  G +R  QRR   ++P R  WSR R  +   +      GRS 
Sbjct: 504 GHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 563

Query: 216 SRAS*IRSKPRSRTE----RSSNRSTGGQSQGSPWGPRRRQRSPADRPAPRGATR----- 64
           SR+   R + RSRT     RS +R+   +   S    RRR RS    PA RG +R     
Sbjct: 564 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRT--PARRGRSRSRTPA 621

Query: 63  RRRAQPRHPGGRPRR 19
           RRR++ R P  R  R
Sbjct: 622 RRRSRTRSPVRRRSR 636

[17][TOP]
>UniRef100_Q3TR34 Putative uncharacterized protein (Fragment) n=1 Tax=Mus musculus
           RepID=Q3TR34_MOUSE
          Length = 493

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 44/125 (35%), Positives = 60/125 (48%), Gaps = 9/125 (7%)
 Frame = -3

Query: 366 REPQSSRTSG*TRPGQRRCGPQTPSRASWSRPREARAWVKPSRTFWGRSRSRAS*IRSKP 187
           R  +S++  G +R  QRR   ++P R  WSR R  +   +      GRS SR+   R + 
Sbjct: 205 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 264

Query: 186 RSRTE----RSSNRSTGGQSQGSPWGPRRRQRSPADRPAPRGATR-----RRRAQPRHPG 34
           RSRT     RS +R+   +   S    RRR RS    PA RG +R     RRR++ R P 
Sbjct: 265 RSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRT--PARRGRSRSRTPARRRSRTRSPV 322

Query: 33  GRPRR 19
            R  R
Sbjct: 323 RRRSR 327