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[1][TOP] >UniRef100_P12852 Oxygen-evolving enhancer protein 3, chloroplastic n=2 Tax=Chlamydomonas reinhardtii RepID=PSBQ_CHLRE Length = 199 Score = 242 bits (617), Expect = 1e-62 Identities = 127/128 (99%), Positives = 128/128 (100%) Frame = +1 Query: 7 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD 186 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD Sbjct: 1 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD 60 Query: 187 RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVYIQKSY 366 RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDV+IQKSY Sbjct: 61 RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSY 120 Query: 367 WTEAREQL 390 WTEAREQL Sbjct: 121 WTEAREQL 128 [2][TOP] >UniRef100_Q1WLV1 Chloroplast oxygen-evolving protein 3 n=1 Tax=Chlamydomonas incerta RepID=Q1WLV1_CHLIN Length = 200 Score = 228 bits (580), Expect = 2e-58 Identities = 121/129 (93%), Positives = 125/129 (96%), Gaps = 1/129 (0%) Frame = +1 Query: 7 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALAL-TPVDLFD 183 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAA A TPVDLFD Sbjct: 1 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAAFAAATPVDLFD 60 Query: 184 DRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVYIQKS 363 DRS R+RGFDLIYEARDLDLPQNVREGFTQARASL+ETKKRVKESEARIDADLDV+I+KS Sbjct: 61 DRSARERGFDLIYEARDLDLPQNVREGFTQARASLEETKKRVKESEARIDADLDVFIKKS 120 Query: 364 YWTEAREQL 390 YWTEAREQL Sbjct: 121 YWTEAREQL 129 [3][TOP] >UniRef100_Q41643 Oxygen-evolving enhancer protein 3, chloroplastic n=1 Tax=Volvox carteri RepID=PSBQ_VOLCA Length = 202 Score = 181 bits (459), Expect = 2e-44 Identities = 98/130 (75%), Positives = 108/130 (83%), Gaps = 2/130 (1%) Frame = +1 Query: 7 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAV--APKAALALTPVDLF 180 MALA KVA+RPAVASRRG VVVRAS ESRRAVLGGLLAS V A+ A KA A TPVDLF Sbjct: 1 MALAQKVASRPAVASRRGVVVVRASVESRRAVLGGLLASTVVALTSANKAQAAATPVDLF 60 Query: 181 DDRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVYIQK 360 DDR VR+ GFDLIYEARDLDL Q+ R+G QAR S+D T KRVKESE RIDADL+ +I+K Sbjct: 61 DDRKVRETGFDLIYEARDLDLRQSARDGLDQARGSIDATIKRVKESETRIDADLEGFIKK 120 Query: 361 SYWTEAREQL 390 +YWTEAREQL Sbjct: 121 NYWTEAREQL 130 [4][TOP] >UniRef100_Q7XYI7 Oxygen-evolving enhancer protein 3 n=1 Tax=Bigelowiella natans RepID=Q7XYI7_BIGNA Length = 237 Score = 93.6 bits (231), Expect = 6e-18 Identities = 59/130 (45%), Positives = 77/130 (59%) Frame = +1 Query: 1 AKMALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLF 180 +++ALA TR A S R V A+ RRAVLGGL +A A K+A AL V L Sbjct: 45 SELALAQ---TRTAGVSCRN--VRTAAQMDRRAVLGGLFGTAAFGAA-KSAQALQDVQLI 98 Query: 181 DDRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVYIQK 360 DDR + GF++IYEARDL L Q+ R+G TQAR L ETKKR +E ++ + ++ K Sbjct: 99 DDRKAKKNGFEIIYEARDLSLDQDTRDGMTQARTGLQETKKRAIGAEKKL-TEAGSFVDK 157 Query: 361 SYWTEAREQL 390 YW+E R L Sbjct: 158 KYWSEGRTVL 167 [5][TOP] >UniRef100_B5A4I8 Photosystem II oxygen evolving enhancer protein 3 n=1 Tax=Gymnochlora stellata RepID=B5A4I8_GYMST Length = 222 Score = 93.6 bits (231), Expect = 6e-18 Identities = 54/122 (44%), Positives = 71/122 (58%), Gaps = 1/122 (0%) Frame = +1 Query: 28 ATRPAVASRRGAVVVRASGE-SRRAVLGGLLASAVAAVAPKAALALTPVDLFDDRSVRDR 204 ATR + R VRA + RR + GL + AV A A+T DL DDR + Sbjct: 38 ATRASTGCRN----VRAQAQMDRRTAMTGLFGAM--AVGANKAFAVTSPDLIDDRKAKST 91 Query: 205 GFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVYIQKSYWTEARE 384 GFD+IYEARDL L Q+ R+GFTQAR+ L ETK RV ++E ++ + ++ K YWTE R Sbjct: 92 GFDIIYEARDLSLDQDTRDGFTQARSGLKETKTRVMDAEKKL-TEAGAFVDKKYWTEGRN 150 Query: 385 QL 390 L Sbjct: 151 VL 152 [6][TOP] >UniRef100_C1EI28 Oxygen-evolving enhancer protein 3, chloroplast n=1 Tax=Micromonas sp. RCC299 RepID=C1EI28_9CHLO Length = 205 Score = 78.2 bits (191), Expect = 3e-13 Identities = 43/116 (37%), Positives = 69/116 (59%), Gaps = 4/116 (3%) Frame = +1 Query: 55 RGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDDRSVRDRGFDLIYEARD 234 + +V V AS ++R+A LLA+ V A+ A+AL ++L D+R G LIYEARD Sbjct: 26 KASVAVTASADARKAA--SLLAAGVIALQATPAMALNMIELQDERQTNKNGLQLIYEARD 83 Query: 235 LDLPQNVREG----FTQARASLDETKKRVKESEARIDADLDVYIQKSYWTEAREQL 390 L++ Q+VR+ F+ + + +T R ES R++ D+ Y+ K+YWT+A +L Sbjct: 84 LNITQSVRQDGNSRFSFQKLTTAQTATRASESIKRLNTDVGEYVGKAYWTQAANEL 139 [7][TOP] >UniRef100_C1N657 Oxygen-evolving enhancer protein 3, chloroplast n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N657_9CHLO Length = 205 Score = 72.0 bits (175), Expect = 2e-11 Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 4/126 (3%) Frame = +1 Query: 25 VATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDDRSVRDR 204 V PAV VV + S++AV L + V A + ALAL ++L D R Sbjct: 16 VVAAPAVRKAEKVSVVVKADMSKKAV--SLAVAGVVAFSAMPALALNQIELQDKRVTNKE 73 Query: 205 GFDLIYEARDLDLPQNVREG----FTQARASLDETKKRVKESEARIDADLDVYIQKSYWT 372 G LIYEARDL++ ++ R+ F + + ++TK R ES RI+ D+ Y++K+YW+ Sbjct: 74 GLQLIYEARDLNIAESTRQDGPSRFAFQKLNSNQTKARATESLNRINKDVPEYVEKAYWS 133 Query: 373 EAREQL 390 +A +L Sbjct: 134 QAGMEL 139 [8][TOP] >UniRef100_A4S8C8 PsbQ, PSII-Q, OEE3, photosystem II polypeptide, oxygen evolving enhancer 3 n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4S8C8_OSTLU Length = 204 Score = 71.6 bits (174), Expect = 2e-11 Identities = 49/131 (37%), Positives = 69/131 (52%), Gaps = 4/131 (3%) Frame = +1 Query: 10 ALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDDR 189 A+A K+ T +V + VV+AS + +AV + + V + P AA A T ++L D R Sbjct: 14 AIAQKITTSKSVKAN---TVVKAS--ANKAVSLAAVTAVVLSATP-AAFAATGIELTDKR 67 Query: 190 SVRDRGFDLIYEARDLDLPQNVREG----FTQARASLDETKKRVKESEARIDADLDVYIQ 357 G LIYEARDL+L Q R F+ + S ET R ES RI+ D+ Y+ Sbjct: 68 VENQTGLQLIYEARDLELDQKPRSDGPSRFSFQKLSQKETAARATESVTRINKDVGEYVG 127 Query: 358 KSYWTEAREQL 390 K YWT+A +L Sbjct: 128 KKYWTQASNEL 138 [9][TOP] >UniRef100_UPI0000383963 COG0513: Superfamily II DNA and RNA helicases n=1 Tax=Magnetospirillum magnetotacticum MS-1 RepID=UPI0000383963 Length = 551 Score = 59.3 bits (142), Expect = 1e-07 Identities = 42/105 (40%), Positives = 54/105 (51%), Gaps = 4/105 (3%) Frame = -3 Query: 313 PSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSGHRTGRRGSEQGQPWGPR 134 P R RPG+R+ RG+ G G GRG R+ +RG P G + G R ++ GPR Sbjct: 434 PPRQPQGRPGQRQGRPGGRGQEGRGEGRGEHRAHEARGGRPGG-QPGHRQDQRQDSRGPR 492 Query: 133 -RRQRSPADRPAPRGATRRRRAQPRHPGGRP---RRGG*QP*RRG 11 QRS RP G R + A+P+ GGRP RRG +P R G Sbjct: 493 PDGQRSDQRRPERAGEGRPQGARPQ--GGRPNDGRRGDARPARSG 535 [10][TOP] >UniRef100_B4VB08 Polyketide synthase type I n=1 Tax=Streptomyces sp. Mg1 RepID=B4VB08_9ACTO Length = 1612 Score = 57.8 bits (138), Expect = 4e-07 Identities = 46/113 (40%), Positives = 56/113 (49%), Gaps = 10/113 (8%) Frame = -3 Query: 343 PGQRRCGPQTPSRA---------SWSRPGKR-EPG*SPRGRSGAGPGRGPRRSGRSRGRE 194 PG RR + P RA + PG+R +P GR+ GPG P R R+ G Sbjct: 1470 PGVRRPARRRPHRAPRVAVRRRMDEAAPGRRRDPRRRAVGRTRRGPGGVPHRR-RTAGAP 1528 Query: 193 PSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGRPRRG 35 P HR R G+ + +P G RRR R PA R PR R RR R PG RPR+G Sbjct: 1529 PRPHRAAR-GTRRRRP-GTRRRGR-PAVRDGPRRRPRGRRPDRRPPGARPRQG 1578 [11][TOP] >UniRef100_UPI0000F2C98A PREDICTED: similar to CG9434-PA n=1 Tax=Monodelphis domestica RepID=UPI0000F2C98A Length = 412 Score = 57.4 bits (137), Expect = 5e-07 Identities = 46/128 (35%), Positives = 56/128 (43%), Gaps = 2/128 (1%) Frame = -3 Query: 388 AAREPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRS-G 212 A R + R G RP R +P A W RP SPRG + PG R S G Sbjct: 118 APRGAEQPRPRGAERPRPRGTNRPSPRGAGWPRPRGAGRS-SPRGANWPSPGEAERPSPG 176 Query: 211 RSRGREPSG-HRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGRPRRG 35 + P G +R RG+EQ +P G R + +RP+PRGA R PR G RG Sbjct: 177 GAEWPRPRGTNRPSPRGAEQPRPRGAERPRPRGTNRPSPRGAGWPR---PRGAGRSSPRG 233 Query: 34 G*QP*RRG 11 P RG Sbjct: 234 ANWPSPRG 241 Score = 55.5 bits (132), Expect = 2e-06 Identities = 49/131 (37%), Positives = 58/131 (44%), Gaps = 7/131 (5%) Frame = -3 Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRS-GRS 206 R + R G RP R +P A W RP SPRG + P R S G + Sbjct: 192 RGAEQPRPRGAERPRPRGTNRPSPRGAGWPRPRGAGRS-SPRGANWPSPRGAERPSPGGA 250 Query: 205 RGREPSG-HRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRR--RRAQPRHPGG--RPR 41 P G +R RG+E+ +P G R A RP PRGA R R A PGG RPR Sbjct: 251 EWPRPRGTNRPSPRGAERPRPRGTNRPSPRGAGRPRPRGARRSSPREANRPSPGGAERPR 310 Query: 40 -RGG*QP*RRG 11 RG +P RG Sbjct: 311 PRGTNRPSPRG 321 [12][TOP] >UniRef100_UPI0000DC1A1B UPI0000DC1A1B related cluster n=1 Tax=Rattus norvegicus RepID=UPI0000DC1A1B Length = 491 Score = 57.4 bits (137), Expect = 5e-07 Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%) Frame = -3 Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206 R +S++ G +R QRR ++P R WSR + G S R G R P GRS Sbjct: 203 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 262 Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59 R R P+ R GR S P R R R+PA R PA RG +R RRR++ R Sbjct: 263 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 318 Query: 58 PGGRPRRGG*QP*RRGPS 5 P R R Q R G S Sbjct: 319 PVRRRSRSRSQARRSGRS 336 [13][TOP] >UniRef100_UPI0000DA333B PREDICTED: similar to serine/arginine repetitive matrix 2 n=1 Tax=Rattus norvegicus RepID=UPI0000DA333B Length = 2707 Score = 57.4 bits (137), Expect = 5e-07 Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%) Frame = -3 Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206 R +S++ G +R QRR ++P R WSR + G S R G R P GRS Sbjct: 510 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 569 Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59 R R P+ R GR S P R R R+PA R PA RG +R RRR++ R Sbjct: 570 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 625 Query: 58 PGGRPRRGG*QP*RRGPS 5 P R R Q R G S Sbjct: 626 PVRRRSRSRSQARRSGRS 643 [14][TOP] >UniRef100_UPI0000484FB6 serine/arginine repetitive matrix 2 n=2 Tax=Mus musculus RepID=UPI0000484FB6 Length = 2703 Score = 57.4 bits (137), Expect = 5e-07 Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%) Frame = -3 Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206 R +S++ G +R QRR ++P R WSR + G S R G R P GRS Sbjct: 511 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 570 Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59 R R P+ R GR S P R R R+PA R PA RG +R RRR++ R Sbjct: 571 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRS 626 Query: 58 PGGRPRRGG*QP*RRGPS 5 P R R Q R G S Sbjct: 627 PVRRRSRSRSQARRSGRS 644 [15][TOP] >UniRef100_Q3TR34 Putative uncharacterized protein (Fragment) n=1 Tax=Mus musculus RepID=Q3TR34_MOUSE Length = 493 Score = 57.4 bits (137), Expect = 5e-07 Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%) Frame = -3 Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206 R +S++ G +R QRR ++P R WSR + G S R G R P GRS Sbjct: 205 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 264 Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59 R R P+ R GR S P R R R+PA R PA RG +R RRR++ R Sbjct: 265 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRS 320 Query: 58 PGGRPRRGG*QP*RRGPS 5 P R R Q R G S Sbjct: 321 PVRRRSRSRSQARRSGRS 338 [16][TOP] >UniRef100_Q8BTI8-3 Isoform 3 of Serine/arginine repetitive matrix protein 2 n=1 Tax=Mus musculus RepID=Q8BTI8-3 Length = 2603 Score = 57.4 bits (137), Expect = 5e-07 Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%) Frame = -3 Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206 R +S++ G +R QRR ++P R WSR + G S R G R P GRS Sbjct: 511 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 570 Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59 R R P+ R GR S P R R R+PA R PA RG +R RRR++ R Sbjct: 571 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 626 Query: 58 PGGRPRRGG*QP*RRGPS 5 P R R Q R G S Sbjct: 627 PVRRRSRSRSQARRSGRS 644 [17][TOP] >UniRef100_Q8BTI8 Serine/arginine repetitive matrix protein 2 n=2 Tax=Mus musculus RepID=SRRM2_MOUSE Length = 2703 Score = 57.4 bits (137), Expect = 5e-07 Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%) Frame = -3 Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206 R +S++ G +R QRR ++P R WSR + G S R G R P GRS Sbjct: 511 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 570 Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59 R R P+ R GR S P R R R+PA R PA RG +R RRR++ R Sbjct: 571 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 626 Query: 58 PGGRPRRGG*QP*RRGPS 5 P R R Q R G S Sbjct: 627 PVRRRSRSRSQARRSGRS 644 [18][TOP] >UniRef100_B4V2Y2 Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1 RepID=B4V2Y2_9ACTO Length = 576 Score = 57.0 bits (136), Expect = 6e-07 Identities = 55/149 (36%), Positives = 62/149 (41%), Gaps = 25/149 (16%) Frame = -3 Query: 385 AREPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*S-----PRGRSGAGP-GRGP 224 A PQ R + RP R P P A RPG+R PG + P+G GP G P Sbjct: 14 AARPQPGRAA---RPPHRVRLPGLPPPAPPLRPGERHPGHAVHRSPPQGAPRTGPRGTRP 70 Query: 223 RRSGRSRGREPSGHRTGRRGSEQGQPWGPRR----------------RQRSPADRPAPRG 92 R+G R R P GRR +G GPRR R+R RPA R Sbjct: 71 GRAGAPRRRRPRP-ALGRRAPARGHRPGPRRQALAAALRRADRQSGLRERRLRARPAGRA 129 Query: 91 ATR---RRRAQPRHPGGRPRRGG*QP*RR 14 A R RRR PR G RPR P RR Sbjct: 130 ARRRDDRRRHHPRPRGRRPRPPDGHPPRR 158 [19][TOP] >UniRef100_UPI0001B4F57C transcriptional regulatory protein n=1 Tax=Streptomyces lividans TK24 RepID=UPI0001B4F57C Length = 1271 Score = 56.6 bits (135), Expect = 8e-07 Identities = 43/123 (34%), Positives = 52/123 (42%), Gaps = 8/123 (6%) Frame = -3 Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPR------ 221 R + RT+G TRPG+ P P A ++ +R R R A P R PR Sbjct: 849 RRTRRGRTAGGTRPGRTAPRPAAPDAARAAQHPRRHRCLPRRPRPAARPRRRPRARTRLR 908 Query: 220 --RSGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGR 47 + GR R P HR RRG +P P R P P A R R + R PGGR Sbjct: 909 THQPGRPRPDGPGAHRPHRRGPALRRPVRPARGAGELGAEPLPVRAGRAAR-RHRRPGGR 967 Query: 46 PRR 38 P R Sbjct: 968 PAR 970 [20][TOP] >UniRef100_UPI00015FBA1A pseudogene n=1 Tax=Sorangium cellulosum 'So ce 56' RepID=UPI00015FBA1A Length = 1848 Score = 55.1 bits (131), Expect = 2e-06 Identities = 46/117 (39%), Positives = 51/117 (43%), Gaps = 6/117 (5%) Frame = -3 Query: 346 RPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRG----PRRSGRSRGREPSGHR 179 RPG RR P+ R + RP R G +P + GPGR RR R RGR P Sbjct: 1076 RPGHRRGAPR--DRRALVRPPARAAGAAPGPAARLGPGRPRAARDRRPARGRGRSPL--- 1130 Query: 178 TGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRR-RAQPRHPGGRPRRG-G*QP*RR 14 PRRR RP G RRR R PR GRPRRG G +P RR Sbjct: 1131 -------------PRRRPLDARPRPPAAGRGRRRGRGAPRSAPGRPRRGPGARPARR 1174 [21][TOP] >UniRef100_UPI000179CC90 UPI000179CC90 related cluster n=1 Tax=Bos taurus RepID=UPI000179CC90 Length = 2724 Score = 55.1 bits (131), Expect = 2e-06 Identities = 47/127 (37%), Positives = 59/127 (46%), Gaps = 12/127 (9%) Frame = -3 Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206 R +S++ G +R QRR ++P R WSR + G S R G R P GRS Sbjct: 510 RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGRSRSARRGRSHSRSPATRGRS 569 Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59 R R P+ R GR S P R R R+PA R PA RG +R RRR++ R Sbjct: 570 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRS 625 Query: 58 PGGRPRR 38 P R R Sbjct: 626 PVRRRSR 632 [22][TOP] >UniRef100_P39881 Homeobox protein cut-like 1 (Fragment) n=1 Tax=Canis lupus familiaris RepID=CUX1_CANFA Length = 975 Score = 55.1 bits (131), Expect = 2e-06 Identities = 41/113 (36%), Positives = 49/113 (43%), Gaps = 1/113 (0%) Frame = -3 Query: 343 PGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSGHRTGRRG 164 PG P+ A+ S+ G E +P R A P +RS R RG P R G G Sbjct: 787 PGAADAEESAPAAAAKSQGGPAEAAVAPEEREEA-PRPAEKRSRRPRGPGPGPGRRGGGG 845 Query: 163 SEQGQPWGPRRRQRSPADRPAPRG-ATRRRRAQPRHPGGRPRRGG*QP*RRGP 8 G P P R P+ RP R RRRR + RH G RR +P R GP Sbjct: 846 PAPGAPAAPAAAARGPSRRPGARAKPRRRRRRRRRHARGGGRRYLSRPARGGP 898 [23][TOP] >UniRef100_UPI00015558E9 PREDICTED: similar to splicing coactivator subunit SRm300, partial n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015558E9 Length = 2677 Score = 54.7 bits (130), Expect = 3e-06 Identities = 48/143 (33%), Positives = 61/143 (42%), Gaps = 19/143 (13%) Frame = -3 Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGK-----REPG*SPRGRS--------GA 242 R +S + G +R QRR ++P R WSR R + RGRS G Sbjct: 395 RRSRSPQRWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGRSRSTARRGRSRSKTPATRGR 454 Query: 241 GPGRGPRRSGRSRGREPSGHR------TGRRGSEQGQPWGPRRRQRSPADRPAPRGATRR 80 R P R GRSR R P+ R T RR + R R R+PA R + + R Sbjct: 455 SRSRTPARRGRSRSRTPTRRRSRSRTSTRRRSRSRTPTRRGRSRSRTPARRRSRTRSPVR 514 Query: 79 RRAQPRHPGGRPRRGG*QP*RRG 11 RR++ R P R R P RRG Sbjct: 515 RRSRTRSPVRRGRSRSRTPARRG 537 [24][TOP] >UniRef100_UPI00015DEFCE predicted gene, EG381818 n=1 Tax=Mus musculus RepID=UPI00015DEFCE Length = 446 Score = 54.7 bits (130), Expect = 3e-06 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 7/107 (6%) Frame = -3 Query: 325 GPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSG---HRTGRRGSEQ 155 GPQ+P R ++ G PG P+G GP + P + G +G P G R + G++Q Sbjct: 100 GPQSPPRPG-TQQGPPPPGPPPQG----GPQQRPPQPGNQQGPPPQGGHQQRPPQPGNQQ 154 Query: 154 GQP--WGPRRRQRSPADR--PAPRGATRRRRAQPRHPGGRPRRGG*Q 26 G P GP++R P ++ P P+G ++R QP + G P +GG Q Sbjct: 155 GPPPQGGPQQRTPQPGNQQGPPPQGGPQQRPPQPGNQQGPPPQGGPQ 201 [25][TOP] >UniRef100_B8A1Z2 Putative uncharacterized protein n=1 Tax=Zea mays RepID=B8A1Z2_MAIZE Length = 262 Score = 54.7 bits (130), Expect = 3e-06 Identities = 43/113 (38%), Positives = 52/113 (46%), Gaps = 3/113 (2%) Frame = -3 Query: 364 RTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSG 185 R +G G R + P R + R +R+PG PRG GAGPGR R GR R R G Sbjct: 86 RGAGRGGGGPGRGAARPPRRDAQQRRHQRQPGAGPRG--GAGPGRLRPRHGRERPRRGGG 143 Query: 184 HRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRR---RRAQPRHPGGRPRRG 35 + RG+ G P PRR+ R R G R +R Q R G RRG Sbjct: 144 RQA--RGARHGAP--PRRQHRVHGQRGRRAGRRRAAALQRVQGRRAGPGARRG 192 [26][TOP] >UniRef100_Q21155 Rnp (Rrm rna binding domain) containing protein 5, confirmed by transcript evidence n=1 Tax=Caenorhabditis elegans RepID=Q21155_CAEEL Length = 289 Score = 54.7 bits (130), Expect = 3e-06 Identities = 42/108 (38%), Positives = 52/108 (48%), Gaps = 5/108 (4%) Frame = -3 Query: 370 SSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPR-RSGRSRGRE 194 SS +SG + G G ++ S +S R R SPR R P RG R RS RG Sbjct: 18 SSSSSGSSSSGSSSSGSRSSSSSSSGRSRSR----SPRRRDTRPPARGGRSRSPIRRGSP 73 Query: 193 PSGHRTGRRGSEQGQPWGPRRRQRSPA----DRPAPRGATRRRRAQPR 62 P G R R + P PRRR+ SP+ DR G+ +RRRA PR Sbjct: 74 PRGARADRDRPMRPSPSPPRRRRPSPSPPRRDRRDRSGSRQRRRASPR 121 [27][TOP] >UniRef100_UPI0000F2DB84 PREDICTED: similar to splicing coactivator subunit SRm300 n=1 Tax=Monodelphis domestica RepID=UPI0000F2DB84 Length = 2785 Score = 54.3 bits (129), Expect = 4e-06 Identities = 50/135 (37%), Positives = 60/135 (44%), Gaps = 11/135 (8%) Frame = -3 Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSR 203 R +S + G +R QRR ++P R WSR R R RS A GR RS +R Sbjct: 522 RRSRSPQRWGRSRSPQRRGRSRSPQRPGWSR--SRNAQRRGRSRSAARRGRSRSRSPATR 579 Query: 202 GREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRHP 56 GR S R S P R R R+PA R PA RG +R RRR++ R P Sbjct: 580 GRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRSP 639 Query: 55 GGRPRRGG*QP*RRG 11 R R P RRG Sbjct: 640 VRRRSRTR-SPARRG 653 [28][TOP] >UniRef100_UPI000184A2B2 Serine/arginine repetitive matrix protein 2 (Serine/arginine-rich splicing factor-related nuclear matrix protein of 300 kDa) (Ser/Arg- related nuclear matrix protein) (SR-related nuclear matrix protein of 300 kDa) (Splicing coactivator subunit SRm300) (30 n=1 Tax=Canis lupus familiaris RepID=UPI000184A2B2 Length = 2682 Score = 54.3 bits (129), Expect = 4e-06 Identities = 52/146 (35%), Positives = 63/146 (43%), Gaps = 19/146 (13%) Frame = -3 Query: 385 AREPQSSRTSGCTRPGQRRCGPQTPSRASWSRPG--------------KREPG*SPRGRS 248 AR SRT P +RR +TP+R SR +R SP RS Sbjct: 522 ARRRSRSRT-----PARRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRS 576 Query: 247 GAGPGRGPRRSGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATR----- 83 G R P R GRSR R P+ RRG + + P RR RS + PA RG +R Sbjct: 577 GRSRSRTPARRGRSRSRTPA-----RRGRSRSRT--PARRGRSRSRTPARRGRSRSRTPA 629 Query: 82 RRRAQPRHPGGRPRRGG*QP*RRGPS 5 RRR++ R R R P RRG S Sbjct: 630 RRRSRSRSVVRRGRSHSRTPQRRGRS 655 Score = 53.9 bits (128), Expect = 5e-06 Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 13/129 (10%) Frame = -3 Query: 385 AREPQSSRTS-----GCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGP 224 +R PQ R+ G +R QRR ++P R WSR + G S R G R P Sbjct: 440 SRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSP 499 Query: 223 RRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQP 65 GRSR R P S RT RR S P R R R+PA R R T RRR++ Sbjct: 500 ATRGRSRSRTPARRARSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRT 559 Query: 64 RHPGGRPRR 38 R P R R Sbjct: 560 RSPVRRRSR 568 [29][TOP] >UniRef100_C4RGM0 Sodium/hydrogen exchanger n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RGM0_9ACTO Length = 666 Score = 54.3 bits (129), Expect = 4e-06 Identities = 50/137 (36%), Positives = 55/137 (40%), Gaps = 18/137 (13%) Frame = -3 Query: 388 AAREPQSS--RTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRS 215 AAR PQ S R G P R P R + + G R G RG GA PG G RR Sbjct: 44 AARRPQQSVRRVLGAADPAAARRRPAARLRRTGAAGGARHLGLRARG-GGAAPGAGRRR- 101 Query: 214 GRSRGREPSGHRTGRRGSEQGQPWGPRRR------QRSPADRPAPRGATRRRRAQPRHP- 56 R+ GH GRR EQ + P RR +R P G RRRR Q HP Sbjct: 102 -----RDRVGHLRGRRRPEQARAGHPGRRAGAVRPERVPGGLRRGLGLGRRRRRQAGHPV 156 Query: 55 ---------GGRPRRGG 32 GR RGG Sbjct: 157 RGADLWRHQPGRVGRGG 173 [30][TOP] >UniRef100_Q9UQ39 RNA binding protein (Fragment) n=1 Tax=Homo sapiens RepID=Q9UQ39_HUMAN Length = 956 Score = 54.3 bits (129), Expect = 4e-06 Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 13/129 (10%) Frame = -3 Query: 385 AREPQSSRTS-----GCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGP 224 +R PQ R+ G +R QRR ++P R WSR + G S R G R P Sbjct: 473 SRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSP 532 Query: 223 RRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQP 65 GRSR R P S RT RR S P R R R+PA R R T RRR++ Sbjct: 533 ATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRT 592 Query: 64 RHPGGRPRR 38 R P R R Sbjct: 593 RSPVRRRSR 601 [31][TOP] >UniRef100_Q9UQ35-2 Isoform 2 of Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo sapiens RepID=Q9UQ35-2 Length = 2334 Score = 54.3 bits (129), Expect = 4e-06 Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 13/129 (10%) Frame = -3 Query: 385 AREPQSSRTS-----GCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGP 224 +R PQ R+ G +R QRR ++P R WSR + G S R G R P Sbjct: 508 SRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSP 567 Query: 223 RRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQP 65 GRSR R P S RT RR S P R R R+PA R R T RRR++ Sbjct: 568 ATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRT 627 Query: 64 RHPGGRPRR 38 R P R R Sbjct: 628 RSPVRRRSR 636 [32][TOP] >UniRef100_Q9UQ35 Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo sapiens RepID=SRRM2_HUMAN Length = 2752 Score = 54.3 bits (129), Expect = 4e-06 Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 13/129 (10%) Frame = -3 Query: 385 AREPQSSRTS-----GCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGP 224 +R PQ R+ G +R QRR ++P R WSR + G S R G R P Sbjct: 508 SRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSP 567 Query: 223 RRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQP 65 GRSR R P S RT RR S P R R R+PA R R T RRR++ Sbjct: 568 ATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRT 627 Query: 64 RHPGGRPRR 38 R P R R Sbjct: 628 RSPVRRRSR 636 [33][TOP] >UniRef100_UPI0000EB020D UPI0000EB020D related cluster n=1 Tax=Canis lupus familiaris RepID=UPI0000EB020D Length = 371 Score = 53.5 bits (127), Expect = 7e-06 Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 2/115 (1%) Frame = -3 Query: 346 RPGQRRCGPQTPSRASWSRPGKREPG*SPR--GRSGAGPGRGPRRSGRSRGREPSGHRTG 173 RPG R G SRA+ + P R G +PR G G P R RG P GH Sbjct: 154 RPGPRPQGHPPWSRAAGTPPSSRAMGATPRRPGPRGHLPLIVQGRRDTPRGPGPRGH-PH 212 Query: 172 RRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGRPRRGG*QP*RRGP 8 R G + P R R RP PRG + RR HP RP G P R GP Sbjct: 213 RPGPRESPPPPRRAGPRGHPHRPGPRGHSSRRPGPQGHPPHRPGPTGATPGRAGP 267 [34][TOP] >UniRef100_B1VYN5 Translation initiation factor IF-2 n=1 Tax=Streptomyces griseus subsp. griseus NBRC 13350 RepID=IF2_STRGG Length = 1038 Score = 53.5 bits (127), Expect = 7e-06 Identities = 50/145 (34%), Positives = 60/145 (41%), Gaps = 29/145 (20%) Frame = -3 Query: 388 AAREPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSG------------ 245 AA +PQ+ R +G T PG R P P+ A R G R+ G GR G Sbjct: 146 AAPQPQAPRPAGAT-PGPRPT-PARPAPAGGQRDGGRDGGQRDGGRGGERGGDRPARPAG 203 Query: 244 -----------AGP--GRGPRRSGRSRGR-EPSGHRTG---RRGSEQGQPWGPRRRQRSP 116 AGP G P SG S G PS R G R G Q +P PR + P Sbjct: 204 QGAPRPGGARPAGPRPGNNPFTSGGSTGMARPSAPRPGGAPRPGGGQERPGAPRPQGSGP 263 Query: 115 ADRPAPRGATRRRRAQPRHPGGRPR 41 P P+G + A+P PGG PR Sbjct: 264 GGAPRPQGGQGQGGARPT-PGGMPR 287 [35][TOP] >UniRef100_Q9EYM5 Competence factor ComEA n=1 Tax=Thermus thermophilus RepID=Q9EYM5_THETH Length = 298 Score = 53.1 bits (126), Expect = 9e-06 Identities = 48/139 (34%), Positives = 52/139 (37%), Gaps = 22/139 (15%) Frame = +3 Query: 6 DGP---RL*GCYPPRRGLPPGCRGCARLRRVAPRGAGRSAGERCRRRGPQ---------- 146 DGP R G P GLPPG APRG G+ R + R PQ Sbjct: 55 DGPGPGRRGGPLHPPEGLPPGGTQGLPRGAQAPRGPGQEGHRRPQARAPQAPRPGGQGPR 114 Query: 147 ---GCPCSDPRRPVR*PLGSRPRLRPDLRGPRP------GPAPERPRGLHPGSRFPGRDQ 299 G P +P R P G+ R P P P GP PE PR HPG R R Sbjct: 115 LGGGAPGQNPLGGAR-PGGAPSRPYPHAPSPGPGNPQPFGPTPEAPRPPHPGLRGGLRGH 173 Query: 300 EAREGV*GPHRR*PGRVHP 356 GP PGR HP Sbjct: 174 PPGRRPLGPRGSGPGRPHP 192