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[1][TOP]
>UniRef100_P12852 Oxygen-evolving enhancer protein 3, chloroplastic n=2
Tax=Chlamydomonas reinhardtii RepID=PSBQ_CHLRE
Length = 199
Score = 242 bits (617), Expect = 1e-62
Identities = 127/128 (99%), Positives = 128/128 (100%)
Frame = +1
Query: 7 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD 186
MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD
Sbjct: 1 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD 60
Query: 187 RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVYIQKSY 366
RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDV+IQKSY
Sbjct: 61 RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSY 120
Query: 367 WTEAREQL 390
WTEAREQL
Sbjct: 121 WTEAREQL 128
[2][TOP]
>UniRef100_Q1WLV1 Chloroplast oxygen-evolving protein 3 n=1 Tax=Chlamydomonas incerta
RepID=Q1WLV1_CHLIN
Length = 200
Score = 228 bits (580), Expect = 2e-58
Identities = 121/129 (93%), Positives = 125/129 (96%), Gaps = 1/129 (0%)
Frame = +1
Query: 7 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALAL-TPVDLFD 183
MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAA A TPVDLFD
Sbjct: 1 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAAFAAATPVDLFD 60
Query: 184 DRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVYIQKS 363
DRS R+RGFDLIYEARDLDLPQNVREGFTQARASL+ETKKRVKESEARIDADLDV+I+KS
Sbjct: 61 DRSARERGFDLIYEARDLDLPQNVREGFTQARASLEETKKRVKESEARIDADLDVFIKKS 120
Query: 364 YWTEAREQL 390
YWTEAREQL
Sbjct: 121 YWTEAREQL 129
[3][TOP]
>UniRef100_Q41643 Oxygen-evolving enhancer protein 3, chloroplastic n=1 Tax=Volvox
carteri RepID=PSBQ_VOLCA
Length = 202
Score = 181 bits (459), Expect = 2e-44
Identities = 98/130 (75%), Positives = 108/130 (83%), Gaps = 2/130 (1%)
Frame = +1
Query: 7 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAV--APKAALALTPVDLF 180
MALA KVA+RPAVASRRG VVVRAS ESRRAVLGGLLAS V A+ A KA A TPVDLF
Sbjct: 1 MALAQKVASRPAVASRRGVVVVRASVESRRAVLGGLLASTVVALTSANKAQAAATPVDLF 60
Query: 181 DDRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVYIQK 360
DDR VR+ GFDLIYEARDLDL Q+ R+G QAR S+D T KRVKESE RIDADL+ +I+K
Sbjct: 61 DDRKVRETGFDLIYEARDLDLRQSARDGLDQARGSIDATIKRVKESETRIDADLEGFIKK 120
Query: 361 SYWTEAREQL 390
+YWTEAREQL
Sbjct: 121 NYWTEAREQL 130
[4][TOP]
>UniRef100_Q7XYI7 Oxygen-evolving enhancer protein 3 n=1 Tax=Bigelowiella natans
RepID=Q7XYI7_BIGNA
Length = 237
Score = 93.6 bits (231), Expect = 6e-18
Identities = 59/130 (45%), Positives = 77/130 (59%)
Frame = +1
Query: 1 AKMALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLF 180
+++ALA TR A S R V A+ RRAVLGGL +A A K+A AL V L
Sbjct: 45 SELALAQ---TRTAGVSCRN--VRTAAQMDRRAVLGGLFGTAAFGAA-KSAQALQDVQLI 98
Query: 181 DDRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVYIQK 360
DDR + GF++IYEARDL L Q+ R+G TQAR L ETKKR +E ++ + ++ K
Sbjct: 99 DDRKAKKNGFEIIYEARDLSLDQDTRDGMTQARTGLQETKKRAIGAEKKL-TEAGSFVDK 157
Query: 361 SYWTEAREQL 390
YW+E R L
Sbjct: 158 KYWSEGRTVL 167
[5][TOP]
>UniRef100_B5A4I8 Photosystem II oxygen evolving enhancer protein 3 n=1
Tax=Gymnochlora stellata RepID=B5A4I8_GYMST
Length = 222
Score = 93.6 bits (231), Expect = 6e-18
Identities = 54/122 (44%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
Frame = +1
Query: 28 ATRPAVASRRGAVVVRASGE-SRRAVLGGLLASAVAAVAPKAALALTPVDLFDDRSVRDR 204
ATR + R VRA + RR + GL + AV A A+T DL DDR +
Sbjct: 38 ATRASTGCRN----VRAQAQMDRRTAMTGLFGAM--AVGANKAFAVTSPDLIDDRKAKST 91
Query: 205 GFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVYIQKSYWTEARE 384
GFD+IYEARDL L Q+ R+GFTQAR+ L ETK RV ++E ++ + ++ K YWTE R
Sbjct: 92 GFDIIYEARDLSLDQDTRDGFTQARSGLKETKTRVMDAEKKL-TEAGAFVDKKYWTEGRN 150
Query: 385 QL 390
L
Sbjct: 151 VL 152
[6][TOP]
>UniRef100_C1EI28 Oxygen-evolving enhancer protein 3, chloroplast n=1 Tax=Micromonas
sp. RCC299 RepID=C1EI28_9CHLO
Length = 205
Score = 78.2 bits (191), Expect = 3e-13
Identities = 43/116 (37%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
Frame = +1
Query: 55 RGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDDRSVRDRGFDLIYEARD 234
+ +V V AS ++R+A LLA+ V A+ A+AL ++L D+R G LIYEARD
Sbjct: 26 KASVAVTASADARKAA--SLLAAGVIALQATPAMALNMIELQDERQTNKNGLQLIYEARD 83
Query: 235 LDLPQNVREG----FTQARASLDETKKRVKESEARIDADLDVYIQKSYWTEAREQL 390
L++ Q+VR+ F+ + + +T R ES R++ D+ Y+ K+YWT+A +L
Sbjct: 84 LNITQSVRQDGNSRFSFQKLTTAQTATRASESIKRLNTDVGEYVGKAYWTQAANEL 139
[7][TOP]
>UniRef100_C1N657 Oxygen-evolving enhancer protein 3, chloroplast n=1 Tax=Micromonas
pusilla CCMP1545 RepID=C1N657_9CHLO
Length = 205
Score = 72.0 bits (175), Expect = 2e-11
Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Frame = +1
Query: 25 VATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDDRSVRDR 204
V PAV VV + S++AV L + V A + ALAL ++L D R
Sbjct: 16 VVAAPAVRKAEKVSVVVKADMSKKAV--SLAVAGVVAFSAMPALALNQIELQDKRVTNKE 73
Query: 205 GFDLIYEARDLDLPQNVREG----FTQARASLDETKKRVKESEARIDADLDVYIQKSYWT 372
G LIYEARDL++ ++ R+ F + + ++TK R ES RI+ D+ Y++K+YW+
Sbjct: 74 GLQLIYEARDLNIAESTRQDGPSRFAFQKLNSNQTKARATESLNRINKDVPEYVEKAYWS 133
Query: 373 EAREQL 390
+A +L
Sbjct: 134 QAGMEL 139
[8][TOP]
>UniRef100_A4S8C8 PsbQ, PSII-Q, OEE3, photosystem II polypeptide, oxygen evolving
enhancer 3 n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S8C8_OSTLU
Length = 204
Score = 71.6 bits (174), Expect = 2e-11
Identities = 49/131 (37%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Frame = +1
Query: 10 ALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDDR 189
A+A K+ T +V + VV+AS + +AV + + V + P AA A T ++L D R
Sbjct: 14 AIAQKITTSKSVKAN---TVVKAS--ANKAVSLAAVTAVVLSATP-AAFAATGIELTDKR 67
Query: 190 SVRDRGFDLIYEARDLDLPQNVREG----FTQARASLDETKKRVKESEARIDADLDVYIQ 357
G LIYEARDL+L Q R F+ + S ET R ES RI+ D+ Y+
Sbjct: 68 VENQTGLQLIYEARDLELDQKPRSDGPSRFSFQKLSQKETAARATESVTRINKDVGEYVG 127
Query: 358 KSYWTEAREQL 390
K YWT+A +L
Sbjct: 128 KKYWTQASNEL 138
[9][TOP]
>UniRef100_UPI0000383963 COG0513: Superfamily II DNA and RNA helicases n=1
Tax=Magnetospirillum magnetotacticum MS-1
RepID=UPI0000383963
Length = 551
Score = 59.3 bits (142), Expect = 1e-07
Identities = 42/105 (40%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
Frame = -3
Query: 313 PSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSGHRTGRRGSEQGQPWGPR 134
P R RPG+R+ RG+ G G GRG R+ +RG P G + G R ++ GPR
Sbjct: 434 PPRQPQGRPGQRQGRPGGRGQEGRGEGRGEHRAHEARGGRPGG-QPGHRQDQRQDSRGPR 492
Query: 133 -RRQRSPADRPAPRGATRRRRAQPRHPGGRP---RRGG*QP*RRG 11
QRS RP G R + A+P+ GGRP RRG +P R G
Sbjct: 493 PDGQRSDQRRPERAGEGRPQGARPQ--GGRPNDGRRGDARPARSG 535
[10][TOP]
>UniRef100_B4VB08 Polyketide synthase type I n=1 Tax=Streptomyces sp. Mg1
RepID=B4VB08_9ACTO
Length = 1612
Score = 57.8 bits (138), Expect = 4e-07
Identities = 46/113 (40%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
Frame = -3
Query: 343 PGQRRCGPQTPSRA---------SWSRPGKR-EPG*SPRGRSGAGPGRGPRRSGRSRGRE 194
PG RR + P RA + PG+R +P GR+ GPG P R R+ G
Sbjct: 1470 PGVRRPARRRPHRAPRVAVRRRMDEAAPGRRRDPRRRAVGRTRRGPGGVPHRR-RTAGAP 1528
Query: 193 PSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGRPRRG 35
P HR R G+ + +P G RRR R PA R PR R RR R PG RPR+G
Sbjct: 1529 PRPHRAAR-GTRRRRP-GTRRRGR-PAVRDGPRRRPRGRRPDRRPPGARPRQG 1578
[11][TOP]
>UniRef100_UPI0000F2C98A PREDICTED: similar to CG9434-PA n=1 Tax=Monodelphis domestica
RepID=UPI0000F2C98A
Length = 412
Score = 57.4 bits (137), Expect = 5e-07
Identities = 46/128 (35%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
Frame = -3
Query: 388 AAREPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRS-G 212
A R + R G RP R +P A W RP SPRG + PG R S G
Sbjct: 118 APRGAEQPRPRGAERPRPRGTNRPSPRGAGWPRPRGAGRS-SPRGANWPSPGEAERPSPG 176
Query: 211 RSRGREPSG-HRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGRPRRG 35
+ P G +R RG+EQ +P G R + +RP+PRGA R PR G RG
Sbjct: 177 GAEWPRPRGTNRPSPRGAEQPRPRGAERPRPRGTNRPSPRGAGWPR---PRGAGRSSPRG 233
Query: 34 G*QP*RRG 11
P RG
Sbjct: 234 ANWPSPRG 241
Score = 55.5 bits (132), Expect = 2e-06
Identities = 49/131 (37%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
Frame = -3
Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRS-GRS 206
R + R G RP R +P A W RP SPRG + P R S G +
Sbjct: 192 RGAEQPRPRGAERPRPRGTNRPSPRGAGWPRPRGAGRS-SPRGANWPSPRGAERPSPGGA 250
Query: 205 RGREPSG-HRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRR--RRAQPRHPGG--RPR 41
P G +R RG+E+ +P G R A RP PRGA R R A PGG RPR
Sbjct: 251 EWPRPRGTNRPSPRGAERPRPRGTNRPSPRGAGRPRPRGARRSSPREANRPSPGGAERPR 310
Query: 40 -RGG*QP*RRG 11
RG +P RG
Sbjct: 311 PRGTNRPSPRG 321
[12][TOP]
>UniRef100_UPI0000DC1A1B UPI0000DC1A1B related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0000DC1A1B
Length = 491
Score = 57.4 bits (137), Expect = 5e-07
Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = -3
Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 203 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 262
Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 263 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 318
Query: 58 PGGRPRRGG*QP*RRGPS 5
P R R Q R G S
Sbjct: 319 PVRRRSRSRSQARRSGRS 336
[13][TOP]
>UniRef100_UPI0000DA333B PREDICTED: similar to serine/arginine repetitive matrix 2 n=1
Tax=Rattus norvegicus RepID=UPI0000DA333B
Length = 2707
Score = 57.4 bits (137), Expect = 5e-07
Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = -3
Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 510 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 569
Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 570 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 625
Query: 58 PGGRPRRGG*QP*RRGPS 5
P R R Q R G S
Sbjct: 626 PVRRRSRSRSQARRSGRS 643
[14][TOP]
>UniRef100_UPI0000484FB6 serine/arginine repetitive matrix 2 n=2 Tax=Mus musculus
RepID=UPI0000484FB6
Length = 2703
Score = 57.4 bits (137), Expect = 5e-07
Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = -3
Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 511 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 570
Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 571 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRS 626
Query: 58 PGGRPRRGG*QP*RRGPS 5
P R R Q R G S
Sbjct: 627 PVRRRSRSRSQARRSGRS 644
[15][TOP]
>UniRef100_Q3TR34 Putative uncharacterized protein (Fragment) n=1 Tax=Mus musculus
RepID=Q3TR34_MOUSE
Length = 493
Score = 57.4 bits (137), Expect = 5e-07
Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = -3
Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 205 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 264
Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 265 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRS 320
Query: 58 PGGRPRRGG*QP*RRGPS 5
P R R Q R G S
Sbjct: 321 PVRRRSRSRSQARRSGRS 338
[16][TOP]
>UniRef100_Q8BTI8-3 Isoform 3 of Serine/arginine repetitive matrix protein 2 n=1
Tax=Mus musculus RepID=Q8BTI8-3
Length = 2603
Score = 57.4 bits (137), Expect = 5e-07
Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = -3
Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 511 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 570
Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 571 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 626
Query: 58 PGGRPRRGG*QP*RRGPS 5
P R R Q R G S
Sbjct: 627 PVRRRSRSRSQARRSGRS 644
[17][TOP]
>UniRef100_Q8BTI8 Serine/arginine repetitive matrix protein 2 n=2 Tax=Mus musculus
RepID=SRRM2_MOUSE
Length = 2703
Score = 57.4 bits (137), Expect = 5e-07
Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
Frame = -3
Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 511 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 570
Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 571 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 626
Query: 58 PGGRPRRGG*QP*RRGPS 5
P R R Q R G S
Sbjct: 627 PVRRRSRSRSQARRSGRS 644
[18][TOP]
>UniRef100_B4V2Y2 Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1
RepID=B4V2Y2_9ACTO
Length = 576
Score = 57.0 bits (136), Expect = 6e-07
Identities = 55/149 (36%), Positives = 62/149 (41%), Gaps = 25/149 (16%)
Frame = -3
Query: 385 AREPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*S-----PRGRSGAGP-GRGP 224
A PQ R + RP R P P A RPG+R PG + P+G GP G P
Sbjct: 14 AARPQPGRAA---RPPHRVRLPGLPPPAPPLRPGERHPGHAVHRSPPQGAPRTGPRGTRP 70
Query: 223 RRSGRSRGREPSGHRTGRRGSEQGQPWGPRR----------------RQRSPADRPAPRG 92
R+G R R P GRR +G GPRR R+R RPA R
Sbjct: 71 GRAGAPRRRRPRP-ALGRRAPARGHRPGPRRQALAAALRRADRQSGLRERRLRARPAGRA 129
Query: 91 ATR---RRRAQPRHPGGRPRRGG*QP*RR 14
A R RRR PR G RPR P RR
Sbjct: 130 ARRRDDRRRHHPRPRGRRPRPPDGHPPRR 158
[19][TOP]
>UniRef100_UPI0001B4F57C transcriptional regulatory protein n=1 Tax=Streptomyces lividans TK24
RepID=UPI0001B4F57C
Length = 1271
Score = 56.6 bits (135), Expect = 8e-07
Identities = 43/123 (34%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Frame = -3
Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPR------ 221
R + RT+G TRPG+ P P A ++ +R R R A P R PR
Sbjct: 849 RRTRRGRTAGGTRPGRTAPRPAAPDAARAAQHPRRHRCLPRRPRPAARPRRRPRARTRLR 908
Query: 220 --RSGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGR 47
+ GR R P HR RRG +P P R P P A R R + R PGGR
Sbjct: 909 THQPGRPRPDGPGAHRPHRRGPALRRPVRPARGAGELGAEPLPVRAGRAAR-RHRRPGGR 967
Query: 46 PRR 38
P R
Sbjct: 968 PAR 970
[20][TOP]
>UniRef100_UPI00015FBA1A pseudogene n=1 Tax=Sorangium cellulosum 'So ce 56'
RepID=UPI00015FBA1A
Length = 1848
Score = 55.1 bits (131), Expect = 2e-06
Identities = 46/117 (39%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
Frame = -3
Query: 346 RPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRG----PRRSGRSRGREPSGHR 179
RPG RR P+ R + RP R G +P + GPGR RR R RGR P
Sbjct: 1076 RPGHRRGAPR--DRRALVRPPARAAGAAPGPAARLGPGRPRAARDRRPARGRGRSPL--- 1130
Query: 178 TGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRR-RAQPRHPGGRPRRG-G*QP*RR 14
PRRR RP G RRR R PR GRPRRG G +P RR
Sbjct: 1131 -------------PRRRPLDARPRPPAAGRGRRRGRGAPRSAPGRPRRGPGARPARR 1174
[21][TOP]
>UniRef100_UPI000179CC90 UPI000179CC90 related cluster n=1 Tax=Bos taurus
RepID=UPI000179CC90
Length = 2724
Score = 55.1 bits (131), Expect = 2e-06
Identities = 47/127 (37%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Frame = -3
Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206
R +S++ G +R QRR ++P R WSR + G S R G R P GRS
Sbjct: 510 RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGRSRSARRGRSHSRSPATRGRS 569
Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 570 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRS 625
Query: 58 PGGRPRR 38
P R R
Sbjct: 626 PVRRRSR 632
[22][TOP]
>UniRef100_P39881 Homeobox protein cut-like 1 (Fragment) n=1 Tax=Canis lupus familiaris
RepID=CUX1_CANFA
Length = 975
Score = 55.1 bits (131), Expect = 2e-06
Identities = 41/113 (36%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
Frame = -3
Query: 343 PGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSGHRTGRRG 164
PG P+ A+ S+ G E +P R A P +RS R RG P R G G
Sbjct: 787 PGAADAEESAPAAAAKSQGGPAEAAVAPEEREEA-PRPAEKRSRRPRGPGPGPGRRGGGG 845
Query: 163 SEQGQPWGPRRRQRSPADRPAPRG-ATRRRRAQPRHPGGRPRRGG*QP*RRGP 8
G P P R P+ RP R RRRR + RH G RR +P R GP
Sbjct: 846 PAPGAPAAPAAAARGPSRRPGARAKPRRRRRRRRRHARGGGRRYLSRPARGGP 898
[23][TOP]
>UniRef100_UPI00015558E9 PREDICTED: similar to splicing coactivator subunit SRm300, partial
n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015558E9
Length = 2677
Score = 54.7 bits (130), Expect = 3e-06
Identities = 48/143 (33%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
Frame = -3
Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGK-----REPG*SPRGRS--------GA 242
R +S + G +R QRR ++P R WSR R + RGRS G
Sbjct: 395 RRSRSPQRWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGRSRSTARRGRSRSKTPATRGR 454
Query: 241 GPGRGPRRSGRSRGREPSGHR------TGRRGSEQGQPWGPRRRQRSPADRPAPRGATRR 80
R P R GRSR R P+ R T RR + R R R+PA R + + R
Sbjct: 455 SRSRTPARRGRSRSRTPTRRRSRSRTSTRRRSRSRTPTRRGRSRSRTPARRRSRTRSPVR 514
Query: 79 RRAQPRHPGGRPRRGG*QP*RRG 11
RR++ R P R R P RRG
Sbjct: 515 RRSRTRSPVRRGRSRSRTPARRG 537
[24][TOP]
>UniRef100_UPI00015DEFCE predicted gene, EG381818 n=1 Tax=Mus musculus RepID=UPI00015DEFCE
Length = 446
Score = 54.7 bits (130), Expect = 3e-06
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Frame = -3
Query: 325 GPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSG---HRTGRRGSEQ 155
GPQ+P R ++ G PG P+G GP + P + G +G P G R + G++Q
Sbjct: 100 GPQSPPRPG-TQQGPPPPGPPPQG----GPQQRPPQPGNQQGPPPQGGHQQRPPQPGNQQ 154
Query: 154 GQP--WGPRRRQRSPADR--PAPRGATRRRRAQPRHPGGRPRRGG*Q 26
G P GP++R P ++ P P+G ++R QP + G P +GG Q
Sbjct: 155 GPPPQGGPQQRTPQPGNQQGPPPQGGPQQRPPQPGNQQGPPPQGGPQ 201
[25][TOP]
>UniRef100_B8A1Z2 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B8A1Z2_MAIZE
Length = 262
Score = 54.7 bits (130), Expect = 3e-06
Identities = 43/113 (38%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Frame = -3
Query: 364 RTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSG 185
R +G G R + P R + R +R+PG PRG GAGPGR R GR R R G
Sbjct: 86 RGAGRGGGGPGRGAARPPRRDAQQRRHQRQPGAGPRG--GAGPGRLRPRHGRERPRRGGG 143
Query: 184 HRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRR---RRAQPRHPGGRPRRG 35
+ RG+ G P PRR+ R R G R +R Q R G RRG
Sbjct: 144 RQA--RGARHGAP--PRRQHRVHGQRGRRAGRRRAAALQRVQGRRAGPGARRG 192
[26][TOP]
>UniRef100_Q21155 Rnp (Rrm rna binding domain) containing protein 5, confirmed by
transcript evidence n=1 Tax=Caenorhabditis elegans
RepID=Q21155_CAEEL
Length = 289
Score = 54.7 bits (130), Expect = 3e-06
Identities = 42/108 (38%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
Frame = -3
Query: 370 SSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPR-RSGRSRGRE 194
SS +SG + G G ++ S +S R R SPR R P RG R RS RG
Sbjct: 18 SSSSSGSSSSGSSSSGSRSSSSSSSGRSRSR----SPRRRDTRPPARGGRSRSPIRRGSP 73
Query: 193 PSGHRTGRRGSEQGQPWGPRRRQRSPA----DRPAPRGATRRRRAQPR 62
P G R R + P PRRR+ SP+ DR G+ +RRRA PR
Sbjct: 74 PRGARADRDRPMRPSPSPPRRRRPSPSPPRRDRRDRSGSRQRRRASPR 121
[27][TOP]
>UniRef100_UPI0000F2DB84 PREDICTED: similar to splicing coactivator subunit SRm300 n=1
Tax=Monodelphis domestica RepID=UPI0000F2DB84
Length = 2785
Score = 54.3 bits (129), Expect = 4e-06
Identities = 50/135 (37%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
Frame = -3
Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSR 203
R +S + G +R QRR ++P R WSR R R RS A GR RS +R
Sbjct: 522 RRSRSPQRWGRSRSPQRRGRSRSPQRPGWSR--SRNAQRRGRSRSAARRGRSRSRSPATR 579
Query: 202 GREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRHP 56
GR S R S P R R R+PA R PA RG +R RRR++ R P
Sbjct: 580 GRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRSP 639
Query: 55 GGRPRRGG*QP*RRG 11
R R P RRG
Sbjct: 640 VRRRSRTR-SPARRG 653
[28][TOP]
>UniRef100_UPI000184A2B2 Serine/arginine repetitive matrix protein 2 (Serine/arginine-rich
splicing factor-related nuclear matrix protein of 300
kDa) (Ser/Arg- related nuclear matrix protein)
(SR-related nuclear matrix protein of 300 kDa) (Splicing
coactivator subunit SRm300) (30 n=1 Tax=Canis lupus
familiaris RepID=UPI000184A2B2
Length = 2682
Score = 54.3 bits (129), Expect = 4e-06
Identities = 52/146 (35%), Positives = 63/146 (43%), Gaps = 19/146 (13%)
Frame = -3
Query: 385 AREPQSSRTSGCTRPGQRRCGPQTPSRASWSRPG--------------KREPG*SPRGRS 248
AR SRT P +RR +TP+R SR +R SP RS
Sbjct: 522 ARRRSRSRT-----PARRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRS 576
Query: 247 GAGPGRGPRRSGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATR----- 83
G R P R GRSR R P+ RRG + + P RR RS + PA RG +R
Sbjct: 577 GRSRSRTPARRGRSRSRTPA-----RRGRSRSRT--PARRGRSRSRTPARRGRSRSRTPA 629
Query: 82 RRRAQPRHPGGRPRRGG*QP*RRGPS 5
RRR++ R R R P RRG S
Sbjct: 630 RRRSRSRSVVRRGRSHSRTPQRRGRS 655
Score = 53.9 bits (128), Expect = 5e-06
Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
Frame = -3
Query: 385 AREPQSSRTS-----GCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGP 224
+R PQ R+ G +R QRR ++P R WSR + G S R G R P
Sbjct: 440 SRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSP 499
Query: 223 RRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQP 65
GRSR R P S RT RR S P R R R+PA R R T RRR++
Sbjct: 500 ATRGRSRSRTPARRARSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRT 559
Query: 64 RHPGGRPRR 38
R P R R
Sbjct: 560 RSPVRRRSR 568
[29][TOP]
>UniRef100_C4RGM0 Sodium/hydrogen exchanger n=1 Tax=Micromonospora sp. ATCC 39149
RepID=C4RGM0_9ACTO
Length = 666
Score = 54.3 bits (129), Expect = 4e-06
Identities = 50/137 (36%), Positives = 55/137 (40%), Gaps = 18/137 (13%)
Frame = -3
Query: 388 AAREPQSS--RTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRS 215
AAR PQ S R G P R P R + + G R G RG GA PG G RR
Sbjct: 44 AARRPQQSVRRVLGAADPAAARRRPAARLRRTGAAGGARHLGLRARG-GGAAPGAGRRR- 101
Query: 214 GRSRGREPSGHRTGRRGSEQGQPWGPRRR------QRSPADRPAPRGATRRRRAQPRHP- 56
R+ GH GRR EQ + P RR +R P G RRRR Q HP
Sbjct: 102 -----RDRVGHLRGRRRPEQARAGHPGRRAGAVRPERVPGGLRRGLGLGRRRRRQAGHPV 156
Query: 55 ---------GGRPRRGG 32
GR RGG
Sbjct: 157 RGADLWRHQPGRVGRGG 173
[30][TOP]
>UniRef100_Q9UQ39 RNA binding protein (Fragment) n=1 Tax=Homo sapiens
RepID=Q9UQ39_HUMAN
Length = 956
Score = 54.3 bits (129), Expect = 4e-06
Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
Frame = -3
Query: 385 AREPQSSRTS-----GCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGP 224
+R PQ R+ G +R QRR ++P R WSR + G S R G R P
Sbjct: 473 SRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSP 532
Query: 223 RRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQP 65
GRSR R P S RT RR S P R R R+PA R R T RRR++
Sbjct: 533 ATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRT 592
Query: 64 RHPGGRPRR 38
R P R R
Sbjct: 593 RSPVRRRSR 601
[31][TOP]
>UniRef100_Q9UQ35-2 Isoform 2 of Serine/arginine repetitive matrix protein 2 n=1
Tax=Homo sapiens RepID=Q9UQ35-2
Length = 2334
Score = 54.3 bits (129), Expect = 4e-06
Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
Frame = -3
Query: 385 AREPQSSRTS-----GCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGP 224
+R PQ R+ G +R QRR ++P R WSR + G S R G R P
Sbjct: 508 SRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSP 567
Query: 223 RRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQP 65
GRSR R P S RT RR S P R R R+PA R R T RRR++
Sbjct: 568 ATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRT 627
Query: 64 RHPGGRPRR 38
R P R R
Sbjct: 628 RSPVRRRSR 636
[32][TOP]
>UniRef100_Q9UQ35 Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo sapiens
RepID=SRRM2_HUMAN
Length = 2752
Score = 54.3 bits (129), Expect = 4e-06
Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
Frame = -3
Query: 385 AREPQSSRTS-----GCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGP 224
+R PQ R+ G +R QRR ++P R WSR + G S R G R P
Sbjct: 508 SRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSP 567
Query: 223 RRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQP 65
GRSR R P S RT RR S P R R R+PA R R T RRR++
Sbjct: 568 ATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRT 627
Query: 64 RHPGGRPRR 38
R P R R
Sbjct: 628 RSPVRRRSR 636
[33][TOP]
>UniRef100_UPI0000EB020D UPI0000EB020D related cluster n=1 Tax=Canis lupus familiaris
RepID=UPI0000EB020D
Length = 371
Score = 53.5 bits (127), Expect = 7e-06
Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
Frame = -3
Query: 346 RPGQRRCGPQTPSRASWSRPGKREPG*SPR--GRSGAGPGRGPRRSGRSRGREPSGHRTG 173
RPG R G SRA+ + P R G +PR G G P R RG P GH
Sbjct: 154 RPGPRPQGHPPWSRAAGTPPSSRAMGATPRRPGPRGHLPLIVQGRRDTPRGPGPRGH-PH 212
Query: 172 RRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGRPRRGG*QP*RRGP 8
R G + P R R RP PRG + RR HP RP G P R GP
Sbjct: 213 RPGPRESPPPPRRAGPRGHPHRPGPRGHSSRRPGPQGHPPHRPGPTGATPGRAGP 267
[34][TOP]
>UniRef100_B1VYN5 Translation initiation factor IF-2 n=1 Tax=Streptomyces griseus
subsp. griseus NBRC 13350 RepID=IF2_STRGG
Length = 1038
Score = 53.5 bits (127), Expect = 7e-06
Identities = 50/145 (34%), Positives = 60/145 (41%), Gaps = 29/145 (20%)
Frame = -3
Query: 388 AAREPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSG------------ 245
AA +PQ+ R +G T PG R P P+ A R G R+ G GR G
Sbjct: 146 AAPQPQAPRPAGAT-PGPRPT-PARPAPAGGQRDGGRDGGQRDGGRGGERGGDRPARPAG 203
Query: 244 -----------AGP--GRGPRRSGRSRGR-EPSGHRTG---RRGSEQGQPWGPRRRQRSP 116
AGP G P SG S G PS R G R G Q +P PR + P
Sbjct: 204 QGAPRPGGARPAGPRPGNNPFTSGGSTGMARPSAPRPGGAPRPGGGQERPGAPRPQGSGP 263
Query: 115 ADRPAPRGATRRRRAQPRHPGGRPR 41
P P+G + A+P PGG PR
Sbjct: 264 GGAPRPQGGQGQGGARPT-PGGMPR 287
[35][TOP]
>UniRef100_Q9EYM5 Competence factor ComEA n=1 Tax=Thermus thermophilus
RepID=Q9EYM5_THETH
Length = 298
Score = 53.1 bits (126), Expect = 9e-06
Identities = 48/139 (34%), Positives = 52/139 (37%), Gaps = 22/139 (15%)
Frame = +3
Query: 6 DGP---RL*GCYPPRRGLPPGCRGCARLRRVAPRGAGRSAGERCRRRGPQ---------- 146
DGP R G P GLPPG APRG G+ R + R PQ
Sbjct: 55 DGPGPGRRGGPLHPPEGLPPGGTQGLPRGAQAPRGPGQEGHRRPQARAPQAPRPGGQGPR 114
Query: 147 ---GCPCSDPRRPVR*PLGSRPRLRPDLRGPRP------GPAPERPRGLHPGSRFPGRDQ 299
G P +P R P G+ R P P P GP PE PR HPG R R
Sbjct: 115 LGGGAPGQNPLGGAR-PGGAPSRPYPHAPSPGPGNPQPFGPTPEAPRPPHPGLRGGLRGH 173
Query: 300 EAREGV*GPHRR*PGRVHP 356
GP PGR HP
Sbjct: 174 PPGRRPLGPRGSGPGRPHP 192