AV638916 ( HC092e09_r )

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[1][TOP]
>UniRef100_P12852 Oxygen-evolving enhancer protein 3, chloroplastic n=2
           Tax=Chlamydomonas reinhardtii RepID=PSBQ_CHLRE
          Length = 199

 Score =  242 bits (617), Expect = 1e-62
 Identities = 127/128 (99%), Positives = 128/128 (100%)
 Frame = +1

Query: 7   MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD 186
           MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD
Sbjct: 1   MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD 60

Query: 187 RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVYIQKSY 366
           RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDV+IQKSY
Sbjct: 61  RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSY 120

Query: 367 WTEAREQL 390
           WTEAREQL
Sbjct: 121 WTEAREQL 128

[2][TOP]
>UniRef100_Q1WLV1 Chloroplast oxygen-evolving protein 3 n=1 Tax=Chlamydomonas incerta
           RepID=Q1WLV1_CHLIN
          Length = 200

 Score =  228 bits (580), Expect = 2e-58
 Identities = 121/129 (93%), Positives = 125/129 (96%), Gaps = 1/129 (0%)
 Frame = +1

Query: 7   MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALAL-TPVDLFD 183
           MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAA A  TPVDLFD
Sbjct: 1   MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAAFAAATPVDLFD 60

Query: 184 DRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVYIQKS 363
           DRS R+RGFDLIYEARDLDLPQNVREGFTQARASL+ETKKRVKESEARIDADLDV+I+KS
Sbjct: 61  DRSARERGFDLIYEARDLDLPQNVREGFTQARASLEETKKRVKESEARIDADLDVFIKKS 120

Query: 364 YWTEAREQL 390
           YWTEAREQL
Sbjct: 121 YWTEAREQL 129

[3][TOP]
>UniRef100_Q41643 Oxygen-evolving enhancer protein 3, chloroplastic n=1 Tax=Volvox
           carteri RepID=PSBQ_VOLCA
          Length = 202

 Score =  181 bits (459), Expect = 2e-44
 Identities = 98/130 (75%), Positives = 108/130 (83%), Gaps = 2/130 (1%)
 Frame = +1

Query: 7   MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAV--APKAALALTPVDLF 180
           MALA KVA+RPAVASRRG VVVRAS ESRRAVLGGLLAS V A+  A KA  A TPVDLF
Sbjct: 1   MALAQKVASRPAVASRRGVVVVRASVESRRAVLGGLLASTVVALTSANKAQAAATPVDLF 60

Query: 181 DDRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVYIQK 360
           DDR VR+ GFDLIYEARDLDL Q+ R+G  QAR S+D T KRVKESE RIDADL+ +I+K
Sbjct: 61  DDRKVRETGFDLIYEARDLDLRQSARDGLDQARGSIDATIKRVKESETRIDADLEGFIKK 120

Query: 361 SYWTEAREQL 390
           +YWTEAREQL
Sbjct: 121 NYWTEAREQL 130

[4][TOP]
>UniRef100_Q7XYI7 Oxygen-evolving enhancer protein 3 n=1 Tax=Bigelowiella natans
           RepID=Q7XYI7_BIGNA
          Length = 237

 Score = 93.6 bits (231), Expect = 6e-18
 Identities = 59/130 (45%), Positives = 77/130 (59%)
 Frame = +1

Query: 1   AKMALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLF 180
           +++ALA    TR A  S R   V  A+   RRAVLGGL  +A    A K+A AL  V L 
Sbjct: 45  SELALAQ---TRTAGVSCRN--VRTAAQMDRRAVLGGLFGTAAFGAA-KSAQALQDVQLI 98

Query: 181 DDRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVYIQK 360
           DDR  +  GF++IYEARDL L Q+ R+G TQAR  L ETKKR   +E ++  +   ++ K
Sbjct: 99  DDRKAKKNGFEIIYEARDLSLDQDTRDGMTQARTGLQETKKRAIGAEKKL-TEAGSFVDK 157

Query: 361 SYWTEAREQL 390
            YW+E R  L
Sbjct: 158 KYWSEGRTVL 167

[5][TOP]
>UniRef100_B5A4I8 Photosystem II oxygen evolving enhancer protein 3 n=1
           Tax=Gymnochlora stellata RepID=B5A4I8_GYMST
          Length = 222

 Score = 93.6 bits (231), Expect = 6e-18
 Identities = 54/122 (44%), Positives = 71/122 (58%), Gaps = 1/122 (0%)
 Frame = +1

Query: 28  ATRPAVASRRGAVVVRASGE-SRRAVLGGLLASAVAAVAPKAALALTPVDLFDDRSVRDR 204
           ATR +   R     VRA  +  RR  + GL  +   AV    A A+T  DL DDR  +  
Sbjct: 38  ATRASTGCRN----VRAQAQMDRRTAMTGLFGAM--AVGANKAFAVTSPDLIDDRKAKST 91

Query: 205 GFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVYIQKSYWTEARE 384
           GFD+IYEARDL L Q+ R+GFTQAR+ L ETK RV ++E ++  +   ++ K YWTE R 
Sbjct: 92  GFDIIYEARDLSLDQDTRDGFTQARSGLKETKTRVMDAEKKL-TEAGAFVDKKYWTEGRN 150

Query: 385 QL 390
            L
Sbjct: 151 VL 152

[6][TOP]
>UniRef100_C1EI28 Oxygen-evolving enhancer protein 3, chloroplast n=1 Tax=Micromonas
           sp. RCC299 RepID=C1EI28_9CHLO
          Length = 205

 Score = 78.2 bits (191), Expect = 3e-13
 Identities = 43/116 (37%), Positives = 69/116 (59%), Gaps = 4/116 (3%)
 Frame = +1

Query: 55  RGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDDRSVRDRGFDLIYEARD 234
           + +V V AS ++R+A    LLA+ V A+    A+AL  ++L D+R     G  LIYEARD
Sbjct: 26  KASVAVTASADARKAA--SLLAAGVIALQATPAMALNMIELQDERQTNKNGLQLIYEARD 83

Query: 235 LDLPQNVREG----FTQARASLDETKKRVKESEARIDADLDVYIQKSYWTEAREQL 390
           L++ Q+VR+     F+  + +  +T  R  ES  R++ D+  Y+ K+YWT+A  +L
Sbjct: 84  LNITQSVRQDGNSRFSFQKLTTAQTATRASESIKRLNTDVGEYVGKAYWTQAANEL 139

[7][TOP]
>UniRef100_C1N657 Oxygen-evolving enhancer protein 3, chloroplast n=1 Tax=Micromonas
           pusilla CCMP1545 RepID=C1N657_9CHLO
          Length = 205

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
 Frame = +1

Query: 25  VATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDDRSVRDR 204
           V   PAV       VV  +  S++AV   L  + V A +   ALAL  ++L D R     
Sbjct: 16  VVAAPAVRKAEKVSVVVKADMSKKAV--SLAVAGVVAFSAMPALALNQIELQDKRVTNKE 73

Query: 205 GFDLIYEARDLDLPQNVREG----FTQARASLDETKKRVKESEARIDADLDVYIQKSYWT 372
           G  LIYEARDL++ ++ R+     F   + + ++TK R  ES  RI+ D+  Y++K+YW+
Sbjct: 74  GLQLIYEARDLNIAESTRQDGPSRFAFQKLNSNQTKARATESLNRINKDVPEYVEKAYWS 133

Query: 373 EAREQL 390
           +A  +L
Sbjct: 134 QAGMEL 139

[8][TOP]
>UniRef100_A4S8C8 PsbQ, PSII-Q, OEE3, photosystem II polypeptide, oxygen evolving
           enhancer 3 n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4S8C8_OSTLU
          Length = 204

 Score = 71.6 bits (174), Expect = 2e-11
 Identities = 49/131 (37%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
 Frame = +1

Query: 10  ALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDDR 189
           A+A K+ T  +V +     VV+AS  + +AV    + + V +  P AA A T ++L D R
Sbjct: 14  AIAQKITTSKSVKAN---TVVKAS--ANKAVSLAAVTAVVLSATP-AAFAATGIELTDKR 67

Query: 190 SVRDRGFDLIYEARDLDLPQNVREG----FTQARASLDETKKRVKESEARIDADLDVYIQ 357
                G  LIYEARDL+L Q  R      F+  + S  ET  R  ES  RI+ D+  Y+ 
Sbjct: 68  VENQTGLQLIYEARDLELDQKPRSDGPSRFSFQKLSQKETAARATESVTRINKDVGEYVG 127

Query: 358 KSYWTEAREQL 390
           K YWT+A  +L
Sbjct: 128 KKYWTQASNEL 138

[9][TOP]
>UniRef100_UPI0000383963 COG0513: Superfamily II DNA and RNA helicases n=1
           Tax=Magnetospirillum magnetotacticum MS-1
           RepID=UPI0000383963
          Length = 551

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 42/105 (40%), Positives = 54/105 (51%), Gaps = 4/105 (3%)
 Frame = -3

Query: 313 PSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSGHRTGRRGSEQGQPWGPR 134
           P R    RPG+R+     RG+ G G GRG  R+  +RG  P G + G R  ++    GPR
Sbjct: 434 PPRQPQGRPGQRQGRPGGRGQEGRGEGRGEHRAHEARGGRPGG-QPGHRQDQRQDSRGPR 492

Query: 133 -RRQRSPADRPAPRGATRRRRAQPRHPGGRP---RRGG*QP*RRG 11
              QRS   RP   G  R + A+P+  GGRP   RRG  +P R G
Sbjct: 493 PDGQRSDQRRPERAGEGRPQGARPQ--GGRPNDGRRGDARPARSG 535

[10][TOP]
>UniRef100_B4VB08 Polyketide synthase type I n=1 Tax=Streptomyces sp. Mg1
            RepID=B4VB08_9ACTO
          Length = 1612

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 46/113 (40%), Positives = 56/113 (49%), Gaps = 10/113 (8%)
 Frame = -3

Query: 343  PGQRRCGPQTPSRA---------SWSRPGKR-EPG*SPRGRSGAGPGRGPRRSGRSRGRE 194
            PG RR   + P RA           + PG+R +P     GR+  GPG  P R  R+ G  
Sbjct: 1470 PGVRRPARRRPHRAPRVAVRRRMDEAAPGRRRDPRRRAVGRTRRGPGGVPHRR-RTAGAP 1528

Query: 193  PSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGRPRRG 35
            P  HR  R G+ + +P G RRR R PA R  PR   R RR   R PG RPR+G
Sbjct: 1529 PRPHRAAR-GTRRRRP-GTRRRGR-PAVRDGPRRRPRGRRPDRRPPGARPRQG 1578

[11][TOP]
>UniRef100_UPI0000F2C98A PREDICTED: similar to CG9434-PA n=1 Tax=Monodelphis domestica
           RepID=UPI0000F2C98A
          Length = 412

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 46/128 (35%), Positives = 56/128 (43%), Gaps = 2/128 (1%)
 Frame = -3

Query: 388 AAREPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRS-G 212
           A R  +  R  G  RP  R     +P  A W RP       SPRG +   PG   R S G
Sbjct: 118 APRGAEQPRPRGAERPRPRGTNRPSPRGAGWPRPRGAGRS-SPRGANWPSPGEAERPSPG 176

Query: 211 RSRGREPSG-HRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGRPRRG 35
            +    P G +R   RG+EQ +P G  R +    +RP+PRGA   R   PR  G    RG
Sbjct: 177 GAEWPRPRGTNRPSPRGAEQPRPRGAERPRPRGTNRPSPRGAGWPR---PRGAGRSSPRG 233

Query: 34  G*QP*RRG 11
              P  RG
Sbjct: 234 ANWPSPRG 241

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 49/131 (37%), Positives = 58/131 (44%), Gaps = 7/131 (5%)
 Frame = -3

Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRS-GRS 206
           R  +  R  G  RP  R     +P  A W RP       SPRG +   P    R S G +
Sbjct: 192 RGAEQPRPRGAERPRPRGTNRPSPRGAGWPRPRGAGRS-SPRGANWPSPRGAERPSPGGA 250

Query: 205 RGREPSG-HRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRR--RRAQPRHPGG--RPR 41
               P G +R   RG+E+ +P G  R     A RP PRGA R   R A    PGG  RPR
Sbjct: 251 EWPRPRGTNRPSPRGAERPRPRGTNRPSPRGAGRPRPRGARRSSPREANRPSPGGAERPR 310

Query: 40  -RGG*QP*RRG 11
            RG  +P  RG
Sbjct: 311 PRGTNRPSPRG 321

[12][TOP]
>UniRef100_UPI0000DC1A1B UPI0000DC1A1B related cluster n=1 Tax=Rattus norvegicus
           RepID=UPI0000DC1A1B
          Length = 491

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
 Frame = -3

Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206
           R  +S++  G +R  QRR   ++P R  WSR    +  G S   R G    R P   GRS
Sbjct: 203 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 262

Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59
           R R P+  R GR  S    P   R R R+PA R      PA RG +R     RRR++ R 
Sbjct: 263 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 318

Query: 58  PGGRPRRGG*QP*RRGPS 5
           P  R  R   Q  R G S
Sbjct: 319 PVRRRSRSRSQARRSGRS 336

[13][TOP]
>UniRef100_UPI0000DA333B PREDICTED: similar to serine/arginine repetitive matrix 2 n=1
           Tax=Rattus norvegicus RepID=UPI0000DA333B
          Length = 2707

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
 Frame = -3

Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206
           R  +S++  G +R  QRR   ++P R  WSR    +  G S   R G    R P   GRS
Sbjct: 510 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 569

Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59
           R R P+  R GR  S    P   R R R+PA R      PA RG +R     RRR++ R 
Sbjct: 570 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 625

Query: 58  PGGRPRRGG*QP*RRGPS 5
           P  R  R   Q  R G S
Sbjct: 626 PVRRRSRSRSQARRSGRS 643

[14][TOP]
>UniRef100_UPI0000484FB6 serine/arginine repetitive matrix 2 n=2 Tax=Mus musculus
           RepID=UPI0000484FB6
          Length = 2703

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
 Frame = -3

Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206
           R  +S++  G +R  QRR   ++P R  WSR    +  G S   R G    R P   GRS
Sbjct: 511 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 570

Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59
           R R P+  R GR  S    P   R R R+PA R      PA RG +R     RRR++ R 
Sbjct: 571 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRS 626

Query: 58  PGGRPRRGG*QP*RRGPS 5
           P  R  R   Q  R G S
Sbjct: 627 PVRRRSRSRSQARRSGRS 644

[15][TOP]
>UniRef100_Q3TR34 Putative uncharacterized protein (Fragment) n=1 Tax=Mus musculus
           RepID=Q3TR34_MOUSE
          Length = 493

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
 Frame = -3

Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206
           R  +S++  G +R  QRR   ++P R  WSR    +  G S   R G    R P   GRS
Sbjct: 205 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 264

Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59
           R R P+  R GR  S    P   R R R+PA R      PA RG +R     RRR++ R 
Sbjct: 265 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRS 320

Query: 58  PGGRPRRGG*QP*RRGPS 5
           P  R  R   Q  R G S
Sbjct: 321 PVRRRSRSRSQARRSGRS 338

[16][TOP]
>UniRef100_Q8BTI8-3 Isoform 3 of Serine/arginine repetitive matrix protein 2 n=1
           Tax=Mus musculus RepID=Q8BTI8-3
          Length = 2603

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
 Frame = -3

Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206
           R  +S++  G +R  QRR   ++P R  WSR    +  G S   R G    R P   GRS
Sbjct: 511 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 570

Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59
           R R P+  R GR  S    P   R R R+PA R      PA RG +R     RRR++ R 
Sbjct: 571 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 626

Query: 58  PGGRPRRGG*QP*RRGPS 5
           P  R  R   Q  R G S
Sbjct: 627 PVRRRSRSRSQARRSGRS 644

[17][TOP]
>UniRef100_Q8BTI8 Serine/arginine repetitive matrix protein 2 n=2 Tax=Mus musculus
           RepID=SRRM2_MOUSE
          Length = 2703

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 51/138 (36%), Positives = 63/138 (45%), Gaps = 12/138 (8%)
 Frame = -3

Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206
           R  +S++  G +R  QRR   ++P R  WSR    +  G S   R G    R P   GRS
Sbjct: 511 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 570

Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59
           R R P+  R GR  S    P   R R R+PA R      PA RG +R     RRR++ R 
Sbjct: 571 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRRRSRTRS 626

Query: 58  PGGRPRRGG*QP*RRGPS 5
           P  R  R   Q  R G S
Sbjct: 627 PVRRRSRSRSQARRSGRS 644

[18][TOP]
>UniRef100_B4V2Y2 Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1
           RepID=B4V2Y2_9ACTO
          Length = 576

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 55/149 (36%), Positives = 62/149 (41%), Gaps = 25/149 (16%)
 Frame = -3

Query: 385 AREPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*S-----PRGRSGAGP-GRGP 224
           A  PQ  R +   RP  R   P  P  A   RPG+R PG +     P+G    GP G  P
Sbjct: 14  AARPQPGRAA---RPPHRVRLPGLPPPAPPLRPGERHPGHAVHRSPPQGAPRTGPRGTRP 70

Query: 223 RRSGRSRGREPSGHRTGRRGSEQGQPWGPRR----------------RQRSPADRPAPRG 92
            R+G  R R P     GRR   +G   GPRR                R+R    RPA R 
Sbjct: 71  GRAGAPRRRRPRP-ALGRRAPARGHRPGPRRQALAAALRRADRQSGLRERRLRARPAGRA 129

Query: 91  ATR---RRRAQPRHPGGRPRRGG*QP*RR 14
           A R   RRR  PR  G RPR     P RR
Sbjct: 130 ARRRDDRRRHHPRPRGRRPRPPDGHPPRR 158

[19][TOP]
>UniRef100_UPI0001B4F57C transcriptional regulatory protein n=1 Tax=Streptomyces lividans TK24
            RepID=UPI0001B4F57C
          Length = 1271

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 43/123 (34%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
 Frame = -3

Query: 382  REPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPR------ 221
            R  +  RT+G TRPG+    P  P  A  ++  +R      R R  A P R PR      
Sbjct: 849  RRTRRGRTAGGTRPGRTAPRPAAPDAARAAQHPRRHRCLPRRPRPAARPRRRPRARTRLR 908

Query: 220  --RSGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGR 47
              + GR R   P  HR  RRG    +P  P R        P P  A R  R + R PGGR
Sbjct: 909  THQPGRPRPDGPGAHRPHRRGPALRRPVRPARGAGELGAEPLPVRAGRAAR-RHRRPGGR 967

Query: 46   PRR 38
            P R
Sbjct: 968  PAR 970

[20][TOP]
>UniRef100_UPI00015FBA1A pseudogene n=1 Tax=Sorangium cellulosum 'So ce 56'
            RepID=UPI00015FBA1A
          Length = 1848

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 46/117 (39%), Positives = 51/117 (43%), Gaps = 6/117 (5%)
 Frame = -3

Query: 346  RPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRG----PRRSGRSRGREPSGHR 179
            RPG RR  P+   R +  RP  R  G +P   +  GPGR      RR  R RGR P    
Sbjct: 1076 RPGHRRGAPR--DRRALVRPPARAAGAAPGPAARLGPGRPRAARDRRPARGRGRSPL--- 1130

Query: 178  TGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRR-RAQPRHPGGRPRRG-G*QP*RR 14
                         PRRR      RP   G  RRR R  PR   GRPRRG G +P RR
Sbjct: 1131 -------------PRRRPLDARPRPPAAGRGRRRGRGAPRSAPGRPRRGPGARPARR 1174

[21][TOP]
>UniRef100_UPI000179CC90 UPI000179CC90 related cluster n=1 Tax=Bos taurus
           RepID=UPI000179CC90
          Length = 2724

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 47/127 (37%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
 Frame = -3

Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 206
           R  +S++  G +R  QRR   ++P R  WSR    +  G S   R G    R P   GRS
Sbjct: 510 RRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGRSRSARRGRSHSRSPATRGRS 569

Query: 205 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 59
           R R P+  R GR  S    P   R R R+PA R      PA RG +R     RRR++ R 
Sbjct: 570 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRS 625

Query: 58  PGGRPRR 38
           P  R  R
Sbjct: 626 PVRRRSR 632

[22][TOP]
>UniRef100_P39881 Homeobox protein cut-like 1 (Fragment) n=1 Tax=Canis lupus familiaris
            RepID=CUX1_CANFA
          Length = 975

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 41/113 (36%), Positives = 49/113 (43%), Gaps = 1/113 (0%)
 Frame = -3

Query: 343  PGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSGHRTGRRG 164
            PG        P+ A+ S+ G  E   +P  R  A P    +RS R RG  P   R G  G
Sbjct: 787  PGAADAEESAPAAAAKSQGGPAEAAVAPEEREEA-PRPAEKRSRRPRGPGPGPGRRGGGG 845

Query: 163  SEQGQPWGPRRRQRSPADRPAPRG-ATRRRRAQPRHPGGRPRRGG*QP*RRGP 8
               G P  P    R P+ RP  R    RRRR + RH  G  RR   +P R GP
Sbjct: 846  PAPGAPAAPAAAARGPSRRPGARAKPRRRRRRRRRHARGGGRRYLSRPARGGP 898

[23][TOP]
>UniRef100_UPI00015558E9 PREDICTED: similar to splicing coactivator subunit SRm300, partial
           n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015558E9
          Length = 2677

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 48/143 (33%), Positives = 61/143 (42%), Gaps = 19/143 (13%)
 Frame = -3

Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGK-----REPG*SPRGRS--------GA 242
           R  +S +  G +R  QRR   ++P R  WSR        R    + RGRS        G 
Sbjct: 395 RRSRSPQRWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGRSRSTARRGRSRSKTPATRGR 454

Query: 241 GPGRGPRRSGRSRGREPSGHR------TGRRGSEQGQPWGPRRRQRSPADRPAPRGATRR 80
              R P R GRSR R P+  R      T RR   +      R R R+PA R +   +  R
Sbjct: 455 SRSRTPARRGRSRSRTPTRRRSRSRTSTRRRSRSRTPTRRGRSRSRTPARRRSRTRSPVR 514

Query: 79  RRAQPRHPGGRPRRGG*QP*RRG 11
           RR++ R P  R R     P RRG
Sbjct: 515 RRSRTRSPVRRGRSRSRTPARRG 537

[24][TOP]
>UniRef100_UPI00015DEFCE predicted gene, EG381818 n=1 Tax=Mus musculus RepID=UPI00015DEFCE
          Length = 446

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
 Frame = -3

Query: 325 GPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSG---HRTGRRGSEQ 155
           GPQ+P R   ++ G   PG  P+G    GP + P + G  +G  P G    R  + G++Q
Sbjct: 100 GPQSPPRPG-TQQGPPPPGPPPQG----GPQQRPPQPGNQQGPPPQGGHQQRPPQPGNQQ 154

Query: 154 GQP--WGPRRRQRSPADR--PAPRGATRRRRAQPRHPGGRPRRGG*Q 26
           G P   GP++R   P ++  P P+G  ++R  QP +  G P +GG Q
Sbjct: 155 GPPPQGGPQQRTPQPGNQQGPPPQGGPQQRPPQPGNQQGPPPQGGPQ 201

[25][TOP]
>UniRef100_B8A1Z2 Putative uncharacterized protein n=1 Tax=Zea mays
           RepID=B8A1Z2_MAIZE
          Length = 262

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 43/113 (38%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
 Frame = -3

Query: 364 RTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSG 185
           R +G    G  R   + P R +  R  +R+PG  PRG  GAGPGR   R GR R R   G
Sbjct: 86  RGAGRGGGGPGRGAARPPRRDAQQRRHQRQPGAGPRG--GAGPGRLRPRHGRERPRRGGG 143

Query: 184 HRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRR---RRAQPRHPGGRPRRG 35
            +   RG+  G P  PRR+ R    R    G  R    +R Q R  G   RRG
Sbjct: 144 RQA--RGARHGAP--PRRQHRVHGQRGRRAGRRRAAALQRVQGRRAGPGARRG 192

[26][TOP]
>UniRef100_Q21155 Rnp (Rrm rna binding domain) containing protein 5, confirmed by
           transcript evidence n=1 Tax=Caenorhabditis elegans
           RepID=Q21155_CAEEL
          Length = 289

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 42/108 (38%), Positives = 52/108 (48%), Gaps = 5/108 (4%)
 Frame = -3

Query: 370 SSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPR-RSGRSRGRE 194
           SS +SG +  G    G ++ S +S  R   R    SPR R    P RG R RS   RG  
Sbjct: 18  SSSSSGSSSSGSSSSGSRSSSSSSSGRSRSR----SPRRRDTRPPARGGRSRSPIRRGSP 73

Query: 193 PSGHRTGRRGSEQGQPWGPRRRQRSPA----DRPAPRGATRRRRAQPR 62
           P G R  R    +  P  PRRR+ SP+    DR    G+ +RRRA PR
Sbjct: 74  PRGARADRDRPMRPSPSPPRRRRPSPSPPRRDRRDRSGSRQRRRASPR 121

[27][TOP]
>UniRef100_UPI0000F2DB84 PREDICTED: similar to splicing coactivator subunit SRm300 n=1
           Tax=Monodelphis domestica RepID=UPI0000F2DB84
          Length = 2785

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 50/135 (37%), Positives = 60/135 (44%), Gaps = 11/135 (8%)
 Frame = -3

Query: 382 REPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSR 203
           R  +S +  G +R  QRR   ++P R  WSR   R      R RS A  GR   RS  +R
Sbjct: 522 RRSRSPQRWGRSRSPQRRGRSRSPQRPGWSR--SRNAQRRGRSRSAARRGRSRSRSPATR 579

Query: 202 GREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRHP 56
           GR  S     R  S    P   R R R+PA R      PA RG +R     RRR++ R P
Sbjct: 580 GRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRSP 639

Query: 55  GGRPRRGG*QP*RRG 11
             R  R    P RRG
Sbjct: 640 VRRRSRTR-SPARRG 653

[28][TOP]
>UniRef100_UPI000184A2B2 Serine/arginine repetitive matrix protein 2 (Serine/arginine-rich
           splicing factor-related nuclear matrix protein of 300
           kDa) (Ser/Arg- related nuclear matrix protein)
           (SR-related nuclear matrix protein of 300 kDa) (Splicing
           coactivator subunit SRm300) (30 n=1 Tax=Canis lupus
           familiaris RepID=UPI000184A2B2
          Length = 2682

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 52/146 (35%), Positives = 63/146 (43%), Gaps = 19/146 (13%)
 Frame = -3

Query: 385 AREPQSSRTSGCTRPGQRRCGPQTPSRASWSRPG--------------KREPG*SPRGRS 248
           AR    SRT     P +RR   +TP+R   SR                +R    SP  RS
Sbjct: 522 ARRRSRSRT-----PARRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRS 576

Query: 247 GAGPGRGPRRSGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATR----- 83
           G    R P R GRSR R P+     RRG  + +   P RR RS +  PA RG +R     
Sbjct: 577 GRSRSRTPARRGRSRSRTPA-----RRGRSRSRT--PARRGRSRSRTPARRGRSRSRTPA 629

Query: 82  RRRAQPRHPGGRPRRGG*QP*RRGPS 5
           RRR++ R    R R     P RRG S
Sbjct: 630 RRRSRSRSVVRRGRSHSRTPQRRGRS 655

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
 Frame = -3

Query: 385 AREPQSSRTS-----GCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGP 224
           +R PQ  R+      G +R  QRR   ++P R  WSR    +  G S   R G    R P
Sbjct: 440 SRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSP 499

Query: 223 RRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQP 65
              GRSR R P     S  RT  RR S    P   R R R+PA R   R  T  RRR++ 
Sbjct: 500 ATRGRSRSRTPARRARSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRT 559

Query: 64  RHPGGRPRR 38
           R P  R  R
Sbjct: 560 RSPVRRRSR 568

[29][TOP]
>UniRef100_C4RGM0 Sodium/hydrogen exchanger n=1 Tax=Micromonospora sp. ATCC 39149
           RepID=C4RGM0_9ACTO
          Length = 666

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 50/137 (36%), Positives = 55/137 (40%), Gaps = 18/137 (13%)
 Frame = -3

Query: 388 AAREPQSS--RTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRS 215
           AAR PQ S  R  G   P   R  P    R + +  G R  G   RG  GA PG G RR 
Sbjct: 44  AARRPQQSVRRVLGAADPAAARRRPAARLRRTGAAGGARHLGLRARG-GGAAPGAGRRR- 101

Query: 214 GRSRGREPSGHRTGRRGSEQGQPWGPRRR------QRSPADRPAPRGATRRRRAQPRHP- 56
                R+  GH  GRR  EQ +   P RR      +R P       G  RRRR Q  HP 
Sbjct: 102 -----RDRVGHLRGRRRPEQARAGHPGRRAGAVRPERVPGGLRRGLGLGRRRRRQAGHPV 156

Query: 55  ---------GGRPRRGG 32
                     GR  RGG
Sbjct: 157 RGADLWRHQPGRVGRGG 173

[30][TOP]
>UniRef100_Q9UQ39 RNA binding protein (Fragment) n=1 Tax=Homo sapiens
           RepID=Q9UQ39_HUMAN
          Length = 956

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
 Frame = -3

Query: 385 AREPQSSRTS-----GCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGP 224
           +R PQ  R+      G +R  QRR   ++P R  WSR    +  G S   R G    R P
Sbjct: 473 SRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSP 532

Query: 223 RRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQP 65
              GRSR R P     S  RT  RR S    P   R R R+PA R   R  T  RRR++ 
Sbjct: 533 ATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRT 592

Query: 64  RHPGGRPRR 38
           R P  R  R
Sbjct: 593 RSPVRRRSR 601

[31][TOP]
>UniRef100_Q9UQ35-2 Isoform 2 of Serine/arginine repetitive matrix protein 2 n=1
           Tax=Homo sapiens RepID=Q9UQ35-2
          Length = 2334

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
 Frame = -3

Query: 385 AREPQSSRTS-----GCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGP 224
           +R PQ  R+      G +R  QRR   ++P R  WSR    +  G S   R G    R P
Sbjct: 508 SRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSP 567

Query: 223 RRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQP 65
              GRSR R P     S  RT  RR S    P   R R R+PA R   R  T  RRR++ 
Sbjct: 568 ATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRT 627

Query: 64  RHPGGRPRR 38
           R P  R  R
Sbjct: 628 RSPVRRRSR 636

[32][TOP]
>UniRef100_Q9UQ35 Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo sapiens
           RepID=SRRM2_HUMAN
          Length = 2752

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 48/129 (37%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
 Frame = -3

Query: 385 AREPQSSRTS-----GCTRPGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGP 224
           +R PQ  R+      G +R  QRR   ++P R  WSR    +  G S   R G    R P
Sbjct: 508 SRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSP 567

Query: 223 RRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQP 65
              GRSR R P     S  RT  RR S    P   R R R+PA R   R  T  RRR++ 
Sbjct: 568 ATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRT 627

Query: 64  RHPGGRPRR 38
           R P  R  R
Sbjct: 628 RSPVRRRSR 636

[33][TOP]
>UniRef100_UPI0000EB020D UPI0000EB020D related cluster n=1 Tax=Canis lupus familiaris
           RepID=UPI0000EB020D
          Length = 371

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 43/115 (37%), Positives = 48/115 (41%), Gaps = 2/115 (1%)
 Frame = -3

Query: 346 RPGQRRCGPQTPSRASWSRPGKREPG*SPR--GRSGAGPGRGPRRSGRSRGREPSGHRTG 173
           RPG R  G    SRA+ + P  R  G +PR  G  G  P     R    RG  P GH   
Sbjct: 154 RPGPRPQGHPPWSRAAGTPPSSRAMGATPRRPGPRGHLPLIVQGRRDTPRGPGPRGH-PH 212

Query: 172 RRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGRPRRGG*QP*RRGP 8
           R G  +  P   R   R    RP PRG + RR     HP  RP   G  P R GP
Sbjct: 213 RPGPRESPPPPRRAGPRGHPHRPGPRGHSSRRPGPQGHPPHRPGPTGATPGRAGP 267

[34][TOP]
>UniRef100_B1VYN5 Translation initiation factor IF-2 n=1 Tax=Streptomyces griseus
           subsp. griseus NBRC 13350 RepID=IF2_STRGG
          Length = 1038

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 50/145 (34%), Positives = 60/145 (41%), Gaps = 29/145 (20%)
 Frame = -3

Query: 388 AAREPQSSRTSGCTRPGQRRCGPQTPSRASWSRPGKREPG*SPRGRSG------------ 245
           AA +PQ+ R +G T PG R   P  P+ A   R G R+ G    GR G            
Sbjct: 146 AAPQPQAPRPAGAT-PGPRPT-PARPAPAGGQRDGGRDGGQRDGGRGGERGGDRPARPAG 203

Query: 244 -----------AGP--GRGPRRSGRSRGR-EPSGHRTG---RRGSEQGQPWGPRRRQRSP 116
                      AGP  G  P  SG S G   PS  R G   R G  Q +P  PR +   P
Sbjct: 204 QGAPRPGGARPAGPRPGNNPFTSGGSTGMARPSAPRPGGAPRPGGGQERPGAPRPQGSGP 263

Query: 115 ADRPAPRGATRRRRAQPRHPGGRPR 41
              P P+G   +  A+P  PGG PR
Sbjct: 264 GGAPRPQGGQGQGGARPT-PGGMPR 287

[35][TOP]
>UniRef100_Q9EYM5 Competence factor ComEA n=1 Tax=Thermus thermophilus
           RepID=Q9EYM5_THETH
          Length = 298

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 48/139 (34%), Positives = 52/139 (37%), Gaps = 22/139 (15%)
 Frame = +3

Query: 6   DGP---RL*GCYPPRRGLPPGCRGCARLRRVAPRGAGRSAGERCRRRGPQ---------- 146
           DGP   R  G   P  GLPPG          APRG G+    R + R PQ          
Sbjct: 55  DGPGPGRRGGPLHPPEGLPPGGTQGLPRGAQAPRGPGQEGHRRPQARAPQAPRPGGQGPR 114

Query: 147 ---GCPCSDPRRPVR*PLGSRPRLRPDLRGPRP------GPAPERPRGLHPGSRFPGRDQ 299
              G P  +P    R P G+  R  P    P P      GP PE PR  HPG R   R  
Sbjct: 115 LGGGAPGQNPLGGAR-PGGAPSRPYPHAPSPGPGNPQPFGPTPEAPRPPHPGLRGGLRGH 173

Query: 300 EAREGV*GPHRR*PGRVHP 356
                  GP    PGR HP
Sbjct: 174 PPGRRPLGPRGSGPGRPHP 192