AV638121 ( HC082b12_r )

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[1][TOP]
>UniRef100_Q6SA05 Rubisco activase n=1 Tax=Chlamydomonas reinhardtii
           RepID=Q6SA05_CHLRE
          Length = 408

 Score =  250 bits (639), Expect = 3e-65
 Identities = 127/127 (100%), Positives = 127/127 (100%)
 Frame = +3

Query: 54  MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 233
           MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT
Sbjct: 1   MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 60

Query: 234 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 413
           RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK
Sbjct: 61  RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 120

Query: 414 NFMDLPK 434
           NFMDLPK
Sbjct: 121 NFMDLPK 127

[2][TOP]
>UniRef100_P23489 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Chlamydomonas reinhardtii RepID=RCA_CHLRE
          Length = 408

 Score =  248 bits (634), Expect = 1e-64
 Identities = 126/127 (99%), Positives = 126/127 (99%)
 Frame = +3

Query: 54  MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 233
           MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVA SRKQMGRWRSIDAGVDASDDQQDIT
Sbjct: 1   MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVAPSRKQMGRWRSIDAGVDASDDQQDIT 60

Query: 234 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 413
           RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK
Sbjct: 61  RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 120

Query: 414 NFMDLPK 434
           NFMDLPK
Sbjct: 121 NFMDLPK 127

[3][TOP]
>UniRef100_O04772 Rubisco activase n=1 Tax=Chlorococcum littorale RepID=O04772_CHLLO
          Length = 403

 Score =  156 bits (395), Expect = 6e-37
 Identities = 79/127 (62%), Positives = 98/127 (77%)
 Frame = +3

Query: 54  MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 233
           MQ+ MK++A    +  GA+ A ++VR   +    +S+ Q GRW +IDAG D SDDQQDIT
Sbjct: 1   MQMQMKNTAF---KATGAKTAPKAVR---VPACKASKSQAGRWAAIDAGNDMSDDQQDIT 54

Query: 234 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 413
           RGR+MVD LFQG    GGTH+AVLSS++YLS +  +FNN+EDGFYISPAFLDKMTIH+AK
Sbjct: 55  RGRDMVDSLFQGPGSGGGTHSAVLSSEDYLSTASRNFNNVEDGFYISPAFLDKMTIHVAK 114

Query: 414 NFMDLPK 434
           NFMDLPK
Sbjct: 115 NFMDLPK 121

[4][TOP]
>UniRef100_C1MPQ3 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast
           n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MPQ3_9CHLO
          Length = 419

 Score =  112 bits (281), Expect = 1e-23
 Identities = 62/133 (46%), Positives = 81/133 (60%), Gaps = 8/133 (6%)
 Frame = +3

Query: 60  VTMKSSAVSGQRVGGARVATRSVRRAQLQVVASS-------RKQMGRWRSIDAGVDASDD 218
           VTM S      ++G    A   V R QL  V +        + QM RW+ +D   D SDD
Sbjct: 4   VTMSSMIAPVAKIG----AVGKVARHQLGSVPNQLGKGNGMKVQMSRWKGMDE--DISDD 57

Query: 219 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIED-GFYISPAFLDKM 395
           QQDI RGR MVD  FQGGFG GGT NA++   +Y+S      +N+ D G+YIS +++DK+
Sbjct: 58  QQDIARGRGMVDSKFQGGFGLGGTQNAIMQGSDYVSDGFKDLSNMSDEGYYISKSYMDKI 117

Query: 396 TIHIAKNFMDLPK 434
           T+H+AKNFMDLPK
Sbjct: 118 TVHVAKNFMDLPK 130

[5][TOP]
>UniRef100_C1E4S4 Ribulose bisphosphate carboxylase/oxygenase activase,chloroplast
           n=1 Tax=Micromonas sp. RCC299 RepID=C1E4S4_9CHLO
          Length = 413

 Score =  112 bits (281), Expect = 1e-23
 Identities = 55/94 (58%), Positives = 66/94 (70%), Gaps = 1/94 (1%)
 Frame = +3

Query: 156 SSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSR 335
           S    M RW+ +D   D SDDQQDI RGR MVD  FQGGFG GGTHNAV+SS +Y+S   
Sbjct: 38  SKTVMMSRWKGMDE--DISDDQQDIARGRNMVDSKFQGGFGLGGTHNAVMSSSDYVSDGF 95

Query: 336 ASFNNIED-GFYISPAFLDKMTIHIAKNFMDLPK 434
              +N+ D G+YIS  F+D+  +HIAKNFMDLPK
Sbjct: 96  KDVSNMTDEGYYISKGFMDRFCVHIAKNFMDLPK 129

[6][TOP]
>UniRef100_A4RW20 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4RW20_OSTLU
          Length = 415

 Score =  112 bits (281), Expect = 1e-23
 Identities = 59/130 (45%), Positives = 81/130 (62%), Gaps = 5/130 (3%)
 Frame = +3

Query: 60  VTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRK-QMGRWRSIDAGVDASDDQQDITR 236
           +T     V         VA ++   A++  V++  K +M RW+ +D  +D SDDQQDI R
Sbjct: 4   ITQPRCGVKANATAKRAVAPKTFLGARVSSVSNGSKVEMSRWKGMD--MDISDDQQDIAR 61

Query: 237 GREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASF----NNIEDGFYISPAFLDKMTIH 404
           GR MVD  FQG  G GGTHNAV+SSQ+YLS    ++    N   + FYISP+++DK+ +H
Sbjct: 62  GRNMVDSKFQGATGIGGTHNAVMSSQDYLSAGMKTYSAHDNITTENFYISPSYMDKVIVH 121

Query: 405 IAKNFMDLPK 434
           +AKNFM LPK
Sbjct: 122 VAKNFMKLPK 131

[7][TOP]
>UniRef100_Q01AY1 RuBisCO activase (IC) n=1 Tax=Ostreococcus tauri RepID=Q01AY1_OSTTA
          Length = 407

 Score =  110 bits (276), Expect = 4e-23
 Identities = 63/134 (47%), Positives = 84/134 (62%), Gaps = 4/134 (2%)
 Frame = +3

Query: 45  LRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQ 224
           +R    T K  AV+ +   GARV++         V   S+ +M RW+ +D  +D SDDQQ
Sbjct: 1   MRQANATTKR-AVAPKTFLGARVSS---------VSNGSKVEMSRWKGMD--MDISDDQQ 48

Query: 225 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASF----NNIEDGFYISPAFLDK 392
           DI RG+ MVD  FQGG G GGTHNAV+SSQ+YLS    ++    N   + FYIS +++DK
Sbjct: 49  DIARGKNMVDSKFQGGAGIGGTHNAVMSSQDYLSAGMKTYDGHDNITAENFYISKSYMDK 108

Query: 393 MTIHIAKNFMDLPK 434
           + +HIAKNFM LPK
Sbjct: 109 VVVHIAKNFMQLPK 122

[8][TOP]
>UniRef100_A9RES5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RES5_PHYPA
          Length = 477

 Score =  108 bits (271), Expect = 1e-22
 Identities = 67/144 (46%), Positives = 88/144 (61%), Gaps = 3/144 (2%)
 Frame = +3

Query: 9   PSTTFRPFI-QSALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWR 185
           PST  +  +  SA    +  + +SA  G   G +RV             A S K++ RW 
Sbjct: 22  PSTVGKSAVPSSAFLGCKSKVPASAALGLAKGKSRVVAE----------AESSKKVDRWA 71

Query: 186 SIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIED 359
            +  G D SDDQQDI RG+ +VD LFQG  G G T NAVLSS +Y+SQ + +++  NI+D
Sbjct: 72  GL--GTDISDDQQDIQRGKGLVDALFQGPQGMG-TQNAVLSSWDYISQGQRTYSMDNIKD 128

Query: 360 GFYISPAFLDKMTIHIAKNFMDLP 431
           G YI+PAF+DK+ IHIAKNFMDLP
Sbjct: 129 GLYIAPAFMDKLVIHIAKNFMDLP 152

[9][TOP]
>UniRef100_O98997 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Vigna radiata var. radiata RepID=RCA_PHAAU
          Length = 439

 Score =  106 bits (265), Expect = 7e-22
 Identities = 58/115 (50%), Positives = 74/115 (64%), Gaps = 2/115 (1%)
 Frame = +3

Query: 93  RVGGARVATRSVR--RAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQ 266
           RV  ++V   S +   A+ ++  S +    RW+ +    D SDDQQDITRG+ MVD LFQ
Sbjct: 44  RVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGL--AYDISDDQQDITRGKGMVDPLFQ 101

Query: 267 GGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFMDLP 431
               AG TH AV+SS EYLS      +NI+DGFYI+PAFLDK+ +HI KNFM LP
Sbjct: 102 APMDAG-THYAVMSSYEYLSTGLRQLDNIKDGFYIAPAFLDKLVVHITKNFMTLP 155

[10][TOP]
>UniRef100_A9TJI2 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TJI2_PHYPA
          Length = 471

 Score =  106 bits (264), Expect = 9e-22
 Identities = 62/128 (48%), Positives = 85/128 (66%), Gaps = 5/128 (3%)
 Frame = +3

Query: 63  TMKSSAVSGQRVGGARVATRSVRRAQLQVVA---SSRKQMGRWRSIDAGVDASDDQQDIT 233
           T+ SSA  G +   +   T  +   + +VVA   SS+ ++ RW  +  G D SDDQQDI 
Sbjct: 21  TVPSSAFFGCKSKVSANGTLGIANGKSRVVAEAESSKTKVDRWAGL--GNDISDDQQDIQ 78

Query: 234 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHI 407
           RG+ MVD LFQG  G G T NA++SS  Y+SQ + +++  NI+DG YI+PAF+DK+ IHI
Sbjct: 79  RGKGMVDALFQGAQGLG-TQNAIMSSWGYVSQGQRTYSMDNIKDGLYIAPAFMDKLVIHI 137

Query: 408 AKNFMDLP 431
           AKNFM+LP
Sbjct: 138 AKNFMNLP 145

[11][TOP]
>UniRef100_B9HMK4 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
           RepID=B9HMK4_POPTR
          Length = 438

 Score =  105 bits (261), Expect = 2e-21
 Identities = 62/133 (46%), Positives = 81/133 (60%), Gaps = 10/133 (7%)
 Frame = +3

Query: 63  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVASS-----RKQMGRWRSIDAGVDASDD 218
           T+ +SA  G   ++V  +R     +     +VVA       + +  RW  +    D SDD
Sbjct: 26  TVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVT--DMSDD 83

Query: 219 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDK 392
           QQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DGFYI+PAF+DK
Sbjct: 84  QQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGFYIAPAFMDK 142

Query: 393 MTIHIAKNFMDLP 431
           + +HI+KNFM LP
Sbjct: 143 IVVHISKNFMSLP 155

[12][TOP]
>UniRef100_A9PFQ2 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=A9PFQ2_POPTR
          Length = 475

 Score =  105 bits (261), Expect = 2e-21
 Identities = 62/133 (46%), Positives = 81/133 (60%), Gaps = 10/133 (7%)
 Frame = +3

Query: 63  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVASS-----RKQMGRWRSIDAGVDASDD 218
           T+ +SA  G   ++V  +R     +     +VVA       + +  RW  +    D SDD
Sbjct: 26  TVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVT--DMSDD 83

Query: 219 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDK 392
           QQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DGFYI+PAF+DK
Sbjct: 84  QQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGFYIAPAFMDK 142

Query: 393 MTIHIAKNFMDLP 431
           + +HI+KNFM LP
Sbjct: 143 IVVHISKNFMSLP 155

[13][TOP]
>UniRef100_B1PDJ9 Chloroplast rubisco activase n=1 Tax=Capsicum annuum
           RepID=B1PDJ9_CAPAN
          Length = 439

 Score =  104 bits (260), Expect = 3e-21
 Identities = 57/121 (47%), Positives = 78/121 (64%), Gaps = 4/121 (3%)
 Frame = +3

Query: 81  VSGQRVGGARVATRSVRRAQLQVVASSRKQMG--RWRSIDAGVDASDDQQDITRGREMVD 254
           V G+ +   +V+ RS+R    +     +KQ    RW+ +  G D SDDQQDI RG+ MVD
Sbjct: 40  VYGKGISSPKVSNRSLRIVAEEKEIDEKKQTDGDRWKGL--GTDVSDDQQDIARGKGMVD 97

Query: 255 DLFQGGFGAGGTHNAVLSSQEYLSQ--SRASFNNIEDGFYISPAFLDKMTIHIAKNFMDL 428
            LFQ   G  GTH+A+++S EYLSQ   + S +N  DGFYI+PAF+DK+ +HI KNF+ L
Sbjct: 98  SLFQAPTGT-GTHHAIMNSYEYLSQGLKQYSMDNKLDGFYIAPAFMDKLVVHITKNFLQL 156

Query: 429 P 431
           P
Sbjct: 157 P 157

[14][TOP]
>UniRef100_O64981 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Phaseolus vulgaris RepID=RCA_PHAVU
          Length = 441

 Score =  104 bits (260), Expect = 3e-21
 Identities = 62/132 (46%), Positives = 84/132 (63%), Gaps = 12/132 (9%)
 Frame = +3

Query: 72  SSAVSG---QRVGGARVATRSVRRAQLQVVASSRK-------QMGRWRSIDAGVDASDDQ 221
           SSA  G   ++V  +RV    +     ++VA+ ++       +  RWR +    D SDDQ
Sbjct: 29  SSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGL--AYDVSDDQ 86

Query: 222 QDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKM 395
           QDITRG+ +VD LFQ    AG TH AV+SS +YLS    + +F+NI+DGFYI+PAFLDK+
Sbjct: 87  QDITRGKGLVDSLFQAPMDAG-THYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKL 145

Query: 396 TIHIAKNFMDLP 431
            +HIAKNFM LP
Sbjct: 146 VVHIAKNFMTLP 157

[15][TOP]
>UniRef100_A9PJF4 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
           Populus deltoides RepID=A9PJF4_9ROSI
          Length = 461

 Score =  103 bits (258), Expect = 5e-21
 Identities = 61/133 (45%), Positives = 81/133 (60%), Gaps = 10/133 (7%)
 Frame = +3

Query: 63  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVASS-----RKQMGRWRSIDAGVDASDD 218
           T+ +SA  G   ++V  +R     +     +VVA       + +  RW  +    D SDD
Sbjct: 26  TVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVT--DMSDD 83

Query: 219 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDK 392
           QQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DG+YI+PAF+DK
Sbjct: 84  QQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGYYIAPAFMDK 142

Query: 393 MTIHIAKNFMDLP 431
           + +HI+KNFM LP
Sbjct: 143 IVVHISKNFMSLP 155

[16][TOP]
>UniRef100_A9PJ06 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
           Populus deltoides RepID=A9PJ06_9ROSI
          Length = 476

 Score =  103 bits (258), Expect = 5e-21
 Identities = 61/130 (46%), Positives = 80/130 (61%), Gaps = 7/130 (5%)
 Frame = +3

Query: 63  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVAS--SRKQMGRWRSIDAGVDASDDQQD 227
           T+ +SA  G   ++V  +R     +     +VVA    +KQ  + R      D SDDQQD
Sbjct: 26  TVPNSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEYDEKKQTDKDRWGGLVTDMSDDQQD 85

Query: 228 ITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTI 401
           ITRG+ MVD LFQ   G G THN +LSS EYLSQ   ++N  N  DG+YI+PAF+DK+ +
Sbjct: 86  ITRGKGMVDSLFQAPQGTG-THNPILSSYEYLSQGLRTYNLDNNMDGYYIAPAFMDKLVV 144

Query: 402 HIAKNFMDLP 431
           HI+KNFM LP
Sbjct: 145 HISKNFMSLP 154

[17][TOP]
>UniRef100_Q40460 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic n=1 Tax=Nicotiana tabacum RepID=RCA1_TOBAC
          Length = 442

 Score =  103 bits (257), Expect = 6e-21
 Identities = 59/121 (48%), Positives = 76/121 (62%), Gaps = 4/121 (3%)
 Frame = +3

Query: 81  VSGQRVGGARVATRSVRRAQLQVVASSRKQMG--RWRSIDAGVDASDDQQDITRGREMVD 254
           V G+ V   +V  +S+R    Q+    +KQ    RW+ +    D SDDQQDITRG+ MVD
Sbjct: 40  VYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQ--DFSDDQQDITRGKGMVD 97

Query: 255 DLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDL 428
            LFQ   G  GTH+AVL S EY+SQ    +N  N  DGFYI+PAF+DK+ +HI KNF+ L
Sbjct: 98  SLFQAPTGT-GTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKL 156

Query: 429 P 431
           P
Sbjct: 157 P 157

[18][TOP]
>UniRef100_C5Y1T6 Putative uncharacterized protein Sb05g027880 n=1 Tax=Sorghum
           bicolor RepID=C5Y1T6_SORBI
          Length = 473

 Score =  102 bits (254), Expect = 1e-20
 Identities = 63/144 (43%), Positives = 85/144 (59%), Gaps = 4/144 (2%)
 Frame = +3

Query: 12  STTFRPFIQSALRTMQ-VTMKSSAVSGQRVGGAR--VATRSVRRAQLQVVASSRK-QMGR 179
           ST    F+ S     Q +T+ S     Q   G R  +  R++     Q V  +++ +  R
Sbjct: 19  STAANSFLGSNNNNKQKLTVSSIRKKKQHQQGGRGLIIIRAMAAVNKQEVDETKQTEQDR 78

Query: 180 WRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIED 359
           WR +    D SDDQQDITRG+ M+D LFQ   G  GTH AVLSS +Y+SQ    +N + D
Sbjct: 79  WRGL--AYDTSDDQQDITRGKGMIDSLFQAPMG-DGTHVAVLSSYDYISQGLRQYNTM-D 134

Query: 360 GFYISPAFLDKMTIHIAKNFMDLP 431
           G+YI+PAF+DK+ +HIAKNFM LP
Sbjct: 135 GYYIAPAFMDKLVLHIAKNFMTLP 158

[19][TOP]
>UniRef100_Q40565 Ribulose bisphosphate carboxylase/oxygenase activase 2,
           chloroplastic n=1 Tax=Nicotiana tabacum RepID=RCA2_TOBAC
          Length = 439

 Score =  102 bits (254), Expect = 1e-20
 Identities = 59/121 (48%), Positives = 76/121 (62%), Gaps = 4/121 (3%)
 Frame = +3

Query: 81  VSGQRVGGARVATRSVRRAQLQVVASSRKQM--GRWRSIDAGVDASDDQQDITRGREMVD 254
           V G+ V   +V  RS+R A  +  A  +KQ    RW+ +    D SDDQQDI RG+ MVD
Sbjct: 40  VYGKGVSSPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQ--DFSDDQQDIARGKGMVD 97

Query: 255 DLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDL 428
            LFQ   G G TH+AVL S EY+SQ    +N  N  DGFYI+P+F+DK+ +HI KNF+ L
Sbjct: 98  SLFQAPTGTG-THHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKL 156

Query: 429 P 431
           P
Sbjct: 157 P 157

[20][TOP]
>UniRef100_Q9ATB9 Rubisco activase (Fragment) n=1 Tax=Zantedeschia aethiopica
           RepID=Q9ATB9_ZANAE
          Length = 435

 Score =  102 bits (253), Expect = 2e-20
 Identities = 60/142 (42%), Positives = 83/142 (58%), Gaps = 2/142 (1%)
 Frame = +3

Query: 12  STTFRPFIQSALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSI 191
           S T   F+ ++L+T+  ++          G  R +T +++     +  S + +  RW  +
Sbjct: 23  SVTRSGFLGTSLKTVNPSL----------GHGRTSTGTLKVMAADLDESKQTKTDRWAGL 72

Query: 192 DAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGF 365
               D SDDQQDITRG+ MVD LFQ   G  GTHN VLSS EY+S    SFN  N  +G 
Sbjct: 73  YT--DTSDDQQDITRGKGMVDSLFQAPMG-DGTHNPVLSSYEYISTGLRSFNLDNTVNGL 129

Query: 366 YISPAFLDKMTIHIAKNFMDLP 431
           YI+PAF+DK+ +HI KNFM+LP
Sbjct: 130 YIAPAFMDKLVVHITKNFMNLP 151

[21][TOP]
>UniRef100_Q9M4V3 Ribulose bisphosphate carboxylase activase B n=1 Tax=Triticum
           aestivum RepID=Q9M4V3_WHEAT
          Length = 432

 Score =  101 bits (252), Expect = 2e-20
 Identities = 55/115 (47%), Positives = 74/115 (64%), Gaps = 4/115 (3%)
 Frame = +3

Query: 99  GGARVATRSVRR--AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGG 272
           GG ++  R VR   A+ ++    +    RW+ +    D SDDQQDITRG+ +VD LFQ  
Sbjct: 36  GGNKINNRVVRAMAAKKELDEGKQTDADRWKGL--AYDISDDQQDITRGKGIVDSLFQAP 93

Query: 273 FGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLP 431
            G  GTH A+LSS EY+SQ   +  F+N  DG YI+PAF+DK+ +H+AKNFM LP
Sbjct: 94  MG-DGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLP 147

[22][TOP]
>UniRef100_Q42450 Ribulose bisphosphate carboxylase/oxygenase activase B,
           chloroplastic n=1 Tax=Hordeum vulgare RepID=RCAB_HORVU
          Length = 425

 Score =  101 bits (252), Expect = 2e-20
 Identities = 55/115 (47%), Positives = 75/115 (65%), Gaps = 4/115 (3%)
 Frame = +3

Query: 99  GGARVATRSVR--RAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGG 272
           GG ++ +R VR   A+ ++    +    RW+ +    D SDDQQDITRG+ +VD LFQ  
Sbjct: 30  GGNKMKSRVVRVMAAKKELDQGKQTDADRWKGL--AYDISDDQQDITRGKGIVDSLFQAP 87

Query: 273 FGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLP 431
            G  GTH A+LSS EY+SQ   +  F+N  DG YI+PAF+DK+ +H+AKNFM LP
Sbjct: 88  MG-DGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLP 141

[23][TOP]
>UniRef100_Q9ATC2 Rubisco activase (Fragment) n=2 Tax=Zantedeschia aethiopica
           RepID=Q9ATC2_ZANAE
          Length = 436

 Score =  101 bits (251), Expect = 3e-20
 Identities = 55/114 (48%), Positives = 72/114 (63%), Gaps = 2/114 (1%)
 Frame = +3

Query: 96  VGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGF 275
           +G  R +T +++     +  S + +  RW  +    D SDDQQDITRG+ MVD LFQ   
Sbjct: 5   LGHGRTSTGTLKVMAADLDESKQTKTDRWAGLYT--DTSDDQQDITRGKGMVDSLFQAPM 62

Query: 276 GAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLP 431
           G  GTHN VLSS EY+S    SFN  N  +G YI+PAF+DK+ +HI KNFM+LP
Sbjct: 63  G-DGTHNPVLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLP 115

[24][TOP]
>UniRef100_Q941B7 At2g39730/T5I7.3 n=1 Tax=Arabidopsis thaliana RepID=Q941B7_ARATH
          Length = 474

 Score =  101 bits (251), Expect = 3e-20
 Identities = 51/87 (58%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
 Frame = +3

Query: 177 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 350
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 351 IEDGFYISPAFLDKMTIHIAKNFMDLP 431
           + DGFYI+PAF+DK+ +HI KNF+ LP
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLP 153

[25][TOP]
>UniRef100_Q8H172 At2g39730/T5I7.3 n=1 Tax=Arabidopsis thaliana RepID=Q8H172_ARATH
          Length = 474

 Score =  101 bits (251), Expect = 3e-20
 Identities = 51/87 (58%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
 Frame = +3

Query: 177 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 350
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 351 IEDGFYISPAFLDKMTIHIAKNFMDLP 431
           + DGFYI+PAF+DK+ +HI KNF+ LP
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLP 153

[26][TOP]
>UniRef100_Q3EBJ5 Putative uncharacterized protein At2g39730.3 n=1 Tax=Arabidopsis
           thaliana RepID=Q3EBJ5_ARATH
          Length = 441

 Score =  101 bits (251), Expect = 3e-20
 Identities = 51/87 (58%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
 Frame = +3

Query: 177 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 350
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 351 IEDGFYISPAFLDKMTIHIAKNFMDLP 431
           + DGFYI+PAF+DK+ +HI KNF+ LP
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLP 153

[27][TOP]
>UniRef100_P10896-2 Isoform Short of Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic n=1 Tax=Arabidopsis thaliana
           RepID=P10896-2
          Length = 446

 Score =  101 bits (251), Expect = 3e-20
 Identities = 51/87 (58%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
 Frame = +3

Query: 177 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 350
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 351 IEDGFYISPAFLDKMTIHIAKNFMDLP 431
           + DGFYI+PAF+DK+ +HI KNF+ LP
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLP 153

[28][TOP]
>UniRef100_P10896 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Arabidopsis thaliana RepID=RCA_ARATH
          Length = 474

 Score =  101 bits (251), Expect = 3e-20
 Identities = 51/87 (58%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
 Frame = +3

Query: 177 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 350
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 351 IEDGFYISPAFLDKMTIHIAKNFMDLP 431
           + DGFYI+PAF+DK+ +HI KNF+ LP
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLP 153

[29][TOP]
>UniRef100_C5J0I3 Chloroplast rubisco activase n=1 Tax=Cucumis sativus
           RepID=C5J0I3_CUCSA
          Length = 611

 Score =  100 bits (250), Expect = 4e-20
 Identities = 58/127 (45%), Positives = 78/127 (61%), Gaps = 7/127 (5%)
 Frame = +3

Query: 72  SSAVSGQRVG-GARVATRSVRRAQLQVVASS----RKQMGRWRSIDAGVDASDDQQDITR 236
           +SA  G R+   +R  T  +     ++VA      + +  +WR +    D SDDQQDITR
Sbjct: 27  NSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGL--AFDTSDDQQDITR 84

Query: 237 GREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRA--SFNNIEDGFYISPAFLDKMTIHIA 410
           G+ + D LFQ   G G THNAVLSS EY+S      S++N  DGFYI+PAF+DK+T+HI 
Sbjct: 85  GKGLADPLFQAPMGTG-THNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIV 143

Query: 411 KNFMDLP 431
           KNF+ LP
Sbjct: 144 KNFLTLP 150

[30][TOP]
>UniRef100_Q01587 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Cucumis sativus RepID=RCA_CUCSA
          Length = 413

 Score =  100 bits (250), Expect = 4e-20
 Identities = 58/127 (45%), Positives = 78/127 (61%), Gaps = 7/127 (5%)
 Frame = +3

Query: 72  SSAVSGQRVG-GARVATRSVRRAQLQVVASS----RKQMGRWRSIDAGVDASDDQQDITR 236
           +SA  G R+   +R  T  +     ++VA      + +  +WR +    D SDDQQDITR
Sbjct: 27  NSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGL--AFDTSDDQQDITR 84

Query: 237 GREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRA--SFNNIEDGFYISPAFLDKMTIHIA 410
           G+ + D LFQ   G G THNAVLSS EY+S      S++N  DGFYI+PAF+DK+T+HI 
Sbjct: 85  GKGLADPLFQAPMGTG-THNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIV 143

Query: 411 KNFMDLP 431
           KNF+ LP
Sbjct: 144 KNFLTLP 150

[31][TOP]
>UniRef100_Q9AXG0 Ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2
           (Fragment) n=1 Tax=Gossypium hirsutum RepID=Q9AXG0_GOSHI
          Length = 435

 Score =  100 bits (249), Expect = 5e-20
 Identities = 52/104 (50%), Positives = 70/104 (67%), Gaps = 2/104 (1%)
 Frame = +3

Query: 126 VRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVL 305
           V  A+ ++   ++ +  RW+ +    D SDDQQDITRG+ MVD LFQ      GTH AV+
Sbjct: 14  VMAAEKEIDEETQTEKDRWKGL--AYDISDDQQDITRGKGMVDSLFQAPMN-DGTHYAVM 70

Query: 306 SSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLP 431
           SS EY+SQ   ++N  N  DGFYI+PAF+DK+ +HI+KNFM LP
Sbjct: 71  SSYEYISQGLKTYNLDNNMDGFYIAPAFMDKLVVHISKNFMSLP 114

[32][TOP]
>UniRef100_C5Y1T5 Putative uncharacterized protein Sb05g027870 n=1 Tax=Sorghum
           bicolor RepID=C5Y1T5_SORBI
          Length = 440

 Score =  100 bits (249), Expect = 5e-20
 Identities = 60/140 (42%), Positives = 85/140 (60%), Gaps = 6/140 (4%)
 Frame = +3

Query: 30  FIQSALRTMQVTMKSSAVSGQRVGGARVATRSVRR----AQLQVVASSRKQMGRWRSIDA 197
           F+   L   QV+  ++AV+      +  A  +V R    A  +V  + +    RW+ +  
Sbjct: 21  FLGKKLSKQQVSA-AAAVNYYHGKSSSSAAANVNRFKVMAAKEVDETKQSDQDRWKGL-- 77

Query: 198 GVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRA--SFNNIEDGFYI 371
             D SDDQQDITRG+ M+D LFQ   G  GTH AVLSS +Y+SQ +   SF+N+ DGFYI
Sbjct: 78  AYDVSDDQQDITRGKGMIDSLFQAPMG-DGTHVAVLSSYDYISQGQKTYSFDNMMDGFYI 136

Query: 372 SPAFLDKMTIHIAKNFMDLP 431
           S +F+DK+ +H++KNFM LP
Sbjct: 137 SKSFMDKLVVHLSKNFMSLP 156

[33][TOP]
>UniRef100_Q308Y6 Ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2
           n=1 Tax=Gossypium hirsutum RepID=Q308Y6_GOSHI
          Length = 421

 Score =  100 bits (248), Expect = 7e-20
 Identities = 52/101 (51%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
 Frame = +3

Query: 135 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 314
           A+ ++   ++ +  RW+ +    D SDDQQDITRG+ MVD LFQ      GTH AV+SS 
Sbjct: 3   AEKEIDEETQTEKDRWKGL--AYDISDDQQDITRGKGMVDSLFQAPMN-DGTHYAVMSSY 59

Query: 315 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLP 431
           EYLSQ   ++N  N  DGFYI+PAF+DK+ +HI KNFM LP
Sbjct: 60  EYLSQGLKTYNLDNNMDGFYIAPAFMDKLVVHITKNFMSLP 100

[34][TOP]
>UniRef100_C0P5X6 Putative uncharacterized protein n=1 Tax=Zea mays
           RepID=C0P5X6_MAIZE
          Length = 463

 Score =  100 bits (248), Expect = 7e-20
 Identities = 55/108 (50%), Positives = 72/108 (66%), Gaps = 2/108 (1%)
 Frame = +3

Query: 114 ATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTH 293
           AT ++R   + V  +   +  RWR +   +D SDDQQDITRG+  VD LFQ   G  GTH
Sbjct: 45  ATTTIRVRAMAV--NKETEQDRWRGL--ALDTSDDQQDITRGKGRVDPLFQAPMG-DGTH 99

Query: 294 NAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLP 431
            AVLSS +Y+SQ     S +N+ DG+YI+PAF+DK+ +HIAKNFM LP
Sbjct: 100 VAVLSSYDYISQGLRHYSLDNMMDGYYIAPAFMDKLVVHIAKNFMPLP 147

[35][TOP]
>UniRef100_A9TBN9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TBN9_PHYPA
          Length = 455

 Score = 99.4 bits (246), Expect = 1e-19
 Identities = 59/136 (43%), Positives = 84/136 (61%), Gaps = 5/136 (3%)
 Frame = +3

Query: 39  SALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASS---RKQMGRWRSIDAGVDA 209
           SA  T + T+ SSA+ G     +   T  V + + +VV  +   +K++ RW  +  G D 
Sbjct: 21  SAQATSKSTLPSSALFGCSSKVSVNVTLGVAKGKSRVVCEAEGEKKKVDRWAGL--GNDI 78

Query: 210 SDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAF 383
           SDDQQDI RG+ MVD LFQG  G G T    +SS +Y+S ++ ++N  N  DG YI+PAF
Sbjct: 79  SDDQQDIQRGKGMVDALFQGATGLG-TQVVTMSSWDYVSTAQRTYNFDNTSDGLYIAPAF 137

Query: 384 LDKMTIHIAKNFMDLP 431
           +DK+ IH+ KNFM+LP
Sbjct: 138 MDKLVIHVCKNFMNLP 153

[36][TOP]
>UniRef100_A9UHW7 Rubisco activase n=1 Tax=Ipomoea batatas RepID=A9UHW7_IPOBA
          Length = 439

 Score = 99.0 bits (245), Expect = 1e-19
 Identities = 52/101 (51%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
 Frame = +3

Query: 135 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 314
           AQ ++  S +    RW+ +    D SDDQQDITRG+ +VD LFQ   G G TH+AVLSS 
Sbjct: 57  AQPEIDESKQTHEDRWKGLVE--DISDDQQDITRGKGLVDTLFQAPMGTG-THHAVLSSY 113

Query: 315 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLP 431
           EY+SQ + +++  N  DGFYI+PAF+DK+ +HI KNF+ LP
Sbjct: 114 EYVSQGQKTYSLDNKLDGFYIAPAFMDKLVVHITKNFLKLP 154

[37][TOP]
>UniRef100_A8W9B0 Chloroplast ribulose 1,5-bisphosphate carboxylase/oxygenase
           activase n=1 Tax=Flaveria bidentis RepID=A8W9B0_FLABI
          Length = 438

 Score = 99.0 bits (245), Expect = 1e-19
 Identities = 55/124 (44%), Positives = 75/124 (60%), Gaps = 1/124 (0%)
 Frame = +3

Query: 63  TMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGR 242
           ++K    S   V   + +T  +  A+ ++  + +    RWR +    D SDDQQDITRG+
Sbjct: 31  SLKKIVNSRHAVNNNKFSTFKIFAAEKEIEETKQTDKDRWRGL--AYDMSDDQQDITRGK 88

Query: 243 EMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTIHIAKNF 419
            MVD LFQ    +G TH AV+SS EY+S   R   +N  DGFYI+PAF+DK+ +HI KNF
Sbjct: 89  GMVDSLFQAPQDSG-THFAVMSSYEYISTGLRTYLDNNMDGFYIAPAFMDKLVVHITKNF 147

Query: 420 MDLP 431
           M LP
Sbjct: 148 MTLP 151

[38][TOP]
>UniRef100_A9TBP0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TBP0_PHYPA
          Length = 445

 Score = 98.6 bits (244), Expect = 2e-19
 Identities = 57/129 (44%), Positives = 82/129 (63%), Gaps = 6/129 (4%)
 Frame = +3

Query: 63  TMKSSAVSGQRVGGARVATRSVRRAQLQVVASS----RKQMGRWRSIDAGVDASDDQQDI 230
           T+ +SA  G +   +   T  V + + +VV  +    +K++ RW  +  G D SDDQQDI
Sbjct: 28  TLPNSAFLGCKSKVSANVTLGVAKGKSRVVCEAEGEKKKKVDRWAGL--GNDISDDQQDI 85

Query: 231 TRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIH 404
            RG+ MVD LFQG  G G T    +SS +Y+S  + ++N  N++DG YI+PAF+DK+ IH
Sbjct: 86  QRGKGMVDALFQGAVGLG-TQVVTMSSWDYVSTGQRTYNFDNMKDGLYIAPAFMDKLIIH 144

Query: 405 IAKNFMDLP 431
           IAKNFM+LP
Sbjct: 145 IAKNFMNLP 153

[39][TOP]
>UniRef100_A9PG25 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=A9PG25_POPTR
          Length = 361

 Score = 98.6 bits (244), Expect = 2e-19
 Identities = 50/76 (65%), Positives = 59/76 (77%), Gaps = 2/76 (2%)
 Frame = +3

Query: 210 SDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAF 383
           SDDQQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DGFYI+PAF
Sbjct: 2   SDDQQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGFYIAPAF 60

Query: 384 LDKMTIHIAKNFMDLP 431
           +DK+ +HI+KNFM LP
Sbjct: 61  MDKIVVHISKNFMSLP 76

[40][TOP]
>UniRef100_B9T427 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplast, putative n=1 Tax=Ricinus communis
           RepID=B9T427_RICCO
          Length = 474

 Score = 97.1 bits (240), Expect = 6e-19
 Identities = 54/113 (47%), Positives = 72/113 (63%), Gaps = 4/113 (3%)
 Frame = +3

Query: 105 ARVATRSVRRAQLQVVAS--SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFG 278
           +++  + +    L+V A    +KQ  + R      D SDDQQDITRG+ MVD LFQ   G
Sbjct: 42  SKIIHQKILSGNLKVSAEYDEQKQTDKDRWGGLAYDISDDQQDITRGKGMVDSLFQAPMG 101

Query: 279 AGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLP 431
            G TH AV+SS +YLSQ    +N  N  DGFYI+PAF+DK+ +HI KNF++LP
Sbjct: 102 TG-THYAVMSSYDYLSQGLRQYNLDNNMDGFYIAPAFMDKVVVHITKNFLNLP 153

[41][TOP]
>UniRef100_B9HT80 Predicted protein (Fragment) n=2 Tax=Populus trichocarpa
           RepID=B9HT80_POPTR
          Length = 424

 Score = 97.1 bits (240), Expect = 6e-19
 Identities = 52/92 (56%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
 Frame = +3

Query: 162 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS 341
           +KQ  + R      D SDDQQDI+RG+ MVD LFQ   G G THN VL+S EYLSQ   +
Sbjct: 14  KKQTDKDRWGGLVTDMSDDQQDISRGKGMVDSLFQAPQGTG-THNPVLNSYEYLSQGLRT 72

Query: 342 FN--NIEDGFYISPAFLDKMTIHIAKNFMDLP 431
           +N  N  DGFYI+PAF+DK+ +HI+KNFM LP
Sbjct: 73  YNLDNNMDGFYIAPAFMDKLVVHISKNFMSLP 104

[42][TOP]
>UniRef100_Q9ZT00 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=3 Tax=Zea mays RepID=RCA_MAIZE
          Length = 433

 Score = 96.7 bits (239), Expect = 7e-19
 Identities = 50/101 (49%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
 Frame = +3

Query: 135 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 314
           A  +V  + +    RW+ +    D SDDQQDITRG+ +VD+LFQ   G  GTH AVLSS 
Sbjct: 52  AAKEVDETKQTDEDRWKGL--AYDISDDQQDITRGKGLVDNLFQAPMG-DGTHVAVLSSY 108

Query: 315 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLP 431
           +Y+SQ + S+N  N+ DGFYI+  F+DK+ +H++KNFM LP
Sbjct: 109 DYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLP 149

[43][TOP]
>UniRef100_C6T859 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6T859_SOYBN
          Length = 443

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 61/133 (45%), Positives = 78/133 (58%), Gaps = 13/133 (9%)
 Frame = +3

Query: 72  SSAVSG---QRVGGARVATRSVRRAQLQVVASSRKQ---------MGRWRSIDAGVDASD 215
           SSA  G   ++V  +RV    V     ++VA   K+           RW+ +    D SD
Sbjct: 29  SSAFFGTSLKKVIASRVPNSKVSGGSFKIVAVEEKKEIEETQQTDKDRWKGL--AYDISD 86

Query: 216 DQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDK 392
           DQQDITRG+ +VD LFQ    AG TH AV+SS EYLS   R   +N  DGFYI+PAF+DK
Sbjct: 87  DQQDITRGKGLVDSLFQAPQDAG-THYAVMSSYEYLSTGLRQYLDNKMDGFYIAPAFMDK 145

Query: 393 MTIHIAKNFMDLP 431
           + +HI+KNFM LP
Sbjct: 146 LVVHISKNFMTLP 158

[44][TOP]
>UniRef100_B7EAB2 cDNA clone:J013001C24, full insert sequence n=2 Tax=Oryza sativa
           Japonica Group RepID=B7EAB2_ORYSJ
          Length = 433

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 51/87 (58%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
 Frame = +3

Query: 177 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 350
           RW+ +    D SDDQQDITRG+  VD LFQ   G  GTH AVLSS EYLSQ   +  F+N
Sbjct: 61  RWKGL--AYDISDDQQDITRGKGFVDSLFQAPTG-DGTHEAVLSSYEYLSQGLRTYDFDN 117

Query: 351 IEDGFYISPAFLDKMTIHIAKNFMDLP 431
              GFYI+PAF+DK+ +HI+KNFM LP
Sbjct: 118 TMGGFYIAPAFMDKLVVHISKNFMTLP 144

[45][TOP]
>UniRef100_P93431 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=2 Tax=Oryza sativa RepID=RCA_ORYSJ
          Length = 466

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 51/87 (58%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
 Frame = +3

Query: 177 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 350
           RW+ +    D SDDQQDITRG+  VD LFQ   G  GTH AVLSS EYLSQ   +  F+N
Sbjct: 61  RWKGL--AYDISDDQQDITRGKGFVDSLFQAPTG-DGTHEAVLSSYEYLSQGLRTYDFDN 117

Query: 351 IEDGFYISPAFLDKMTIHIAKNFMDLP 431
              GFYI+PAF+DK+ +HI+KNFM LP
Sbjct: 118 TMGGFYIAPAFMDKLVVHISKNFMTLP 144

[46][TOP]
>UniRef100_Q06B50 Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase large protein isoform n=2 Tax=Acer rubrum
           RepID=Q06B50_ACERU
          Length = 474

 Score = 95.9 bits (237), Expect = 1e-18
 Identities = 57/130 (43%), Positives = 76/130 (58%), Gaps = 7/130 (5%)
 Frame = +3

Query: 63  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVA----SSRKQMGRWRSIDAGVDASDDQQ 224
           T+ +SA  G  +    +R     V     +VVA    + + +  +WR +    D SDDQQ
Sbjct: 27  TVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGL--AYDTSDDQQ 84

Query: 225 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTI 401
           DITRG+ +VD LFQ   G G TH AV+SS +Y+S   R    N  DGFYI+PAF+DK+ +
Sbjct: 85  DITRGKGLVDSLFQAPSGTG-THYAVMSSYDYISTGLRTYLENSMDGFYIAPAFMDKLVV 143

Query: 402 HIAKNFMDLP 431
           HI KNFM LP
Sbjct: 144 HITKNFMSLP 153

[47][TOP]
>UniRef100_A7NYV5 Chromosome chr6 scaffold_3, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7NYV5_VITVI
          Length = 472

 Score = 95.9 bits (237), Expect = 1e-18
 Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
 Frame = +3

Query: 144 QVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYL 323
           ++  + + +  RW+ +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS EYL
Sbjct: 59  EIDENEQTEKDRWKGL--AYDVSDDQQDITRGKGMVDSLFQAPMQSG-THYAVMSSYEYL 115

Query: 324 SQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLP 431
           S     +N  N  DGFYI+PAF+DK+ +HI KNFM LP
Sbjct: 116 STGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLP 153

[48][TOP]
>UniRef100_A5C3D4 Putative uncharacterized protein n=1 Tax=Vitis vinifera
           RepID=A5C3D4_VITVI
          Length = 472

 Score = 95.9 bits (237), Expect = 1e-18
 Identities = 50/98 (51%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
 Frame = +3

Query: 144 QVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYL 323
           ++  + + +  RW+ +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS EYL
Sbjct: 59  EIDENEQTEKDRWKGL--AYDVSDDQQDITRGKGMVDSLFQAPMQSG-THYAVMSSYEYL 115

Query: 324 SQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLP 431
           S     +N  N  DGFYI+PAF+DK+ +HI KNFM LP
Sbjct: 116 STGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLP 153

[49][TOP]
>UniRef100_Q40281 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Malus x domestica RepID=RCA_MALDO
          Length = 437

 Score = 95.9 bits (237), Expect = 1e-18
 Identities = 53/115 (46%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
 Frame = +3

Query: 105 ARVATRSVRRAQLQVVAS----SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGG 272
           +R     V    L++VAS     +    RW+ +    D SDDQQDITRG+  VD LFQ  
Sbjct: 42  SRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGL--AFDTSDDQQDITRGKGKVDSLFQAP 99

Query: 273 FGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLP 431
            G+G TH A++SS EY+S    + +F+N  DG+YI+PAF+DK+ +HI KNFM LP
Sbjct: 100 QGSG-THFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLP 153

[50][TOP]
>UniRef100_Q7X9A2 Rubisco activase alpha form n=1 Tax=Deschampsia antarctica
           RepID=Q7X9A2_DESAN
          Length = 465

 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 48/87 (55%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
 Frame = +3

Query: 177 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--RASFNN 350
           +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +  F+N
Sbjct: 61  KWKGL--AYDISDDQQDITRGKGIVDSLFQAPMG-DGTHEAVLSSYEYVSQGLKKYDFDN 117

Query: 351 IEDGFYISPAFLDKMTIHIAKNFMDLP 431
              GFYI+PAF+DK+ +H++KNFM LP
Sbjct: 118 TMGGFYIAPAFMDKLVVHLSKNFMTLP 144

[51][TOP]
>UniRef100_Q7X9A1 Rubisco activase beta form n=1 Tax=Deschampsia antarctica
           RepID=Q7X9A1_DESAN
          Length = 428

 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 48/87 (55%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
 Frame = +3

Query: 177 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--RASFNN 350
           +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +  F+N
Sbjct: 61  KWKGL--AYDISDDQQDITRGKGIVDSLFQAPMG-DGTHEAVLSSYEYVSQGLKKYDFDN 117

Query: 351 IEDGFYISPAFLDKMTIHIAKNFMDLP 431
              GFYI+PAF+DK+ +H++KNFM LP
Sbjct: 118 TMGGFYIAPAFMDKLVVHLSKNFMTLP 144

[52][TOP]
>UniRef100_C6YBD7 Chloroplast ribulose-1,5-bisphosphate carboxylase activase
           (Fragment) n=1 Tax=Triticum aestivum RepID=C6YBD7_WHEAT
          Length = 360

 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 48/92 (52%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
 Frame = +3

Query: 162 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 335
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +
Sbjct: 24  KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLKK 80

Query: 336 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLP 431
             F+N   GFYI+PAF+DK+ +H++KNFM LP
Sbjct: 81  YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLP 112

[53][TOP]
>UniRef100_Q05C31 Putative uncharacterized protein n=1 Tax=Homo sapiens
           RepID=Q05C31_HUMAN
          Length = 427

 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 48/92 (52%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
 Frame = +3

Query: 162 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 335
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +
Sbjct: 55  KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLKK 111

Query: 336 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLP 431
             F+N   GFYI+PAF+DK+ +H++KNFM LP
Sbjct: 112 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLP 143

[54][TOP]
>UniRef100_Q40073 Ribulose bisphosphate carboxylase/oxygenase activase A,
           chloroplastic n=2 Tax=Hordeum vulgare RepID=RCAA_HORVU
          Length = 464

 Score = 94.7 bits (234), Expect = 3e-18
 Identities = 48/92 (52%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
 Frame = +3

Query: 162 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 335
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G G TH AVLSS EY+SQ   +
Sbjct: 55  KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTGHG-THEAVLSSYEYVSQGLRK 111

Query: 336 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLP 431
             F+N   GFYI+PAF+DK+ +H++KNFM LP
Sbjct: 112 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLP 143

[55][TOP]
>UniRef100_Q9AXG1 Ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 n=1
           Tax=Gossypium hirsutum RepID=Q9AXG1_GOSHI
          Length = 438

 Score = 94.4 bits (233), Expect = 4e-18
 Identities = 49/101 (48%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
 Frame = +3

Query: 135 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 314
           A  ++   ++    RW+ +    D SDDQQDITRG+ MVD LFQ      GTH AV+SS 
Sbjct: 59  AAKEIDEDTQTDQDRWKGL--AYDISDDQQDITRGKGMVDSLFQAPMN-DGTHYAVMSSY 115

Query: 315 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLP 431
           EY+SQ   +++  N  DGFYI+PAF+DK+ +HI KN+M LP
Sbjct: 116 EYISQGLRTYDLDNNMDGFYIAPAFMDKLVVHITKNYMTLP 156

[56][TOP]
>UniRef100_A9TLG8 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TLG8_PHYPA
          Length = 410

 Score = 94.4 bits (233), Expect = 4e-18
 Identities = 49/91 (53%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
 Frame = +3

Query: 165 KQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASF 344
           K++ RW  +  G D SDDQQDI RG+ MVD LFQG  G G T    +SS +Y+S  + ++
Sbjct: 31  KKVDRWAGL--GNDISDDQQDIQRGKGMVDALFQGAVGLG-TQVVTMSSWDYVSTGQRTY 87

Query: 345 N--NIEDGFYISPAFLDKMTIHIAKNFMDLP 431
           N  N++DG YI+PAF+DK+ IHIAKNFM+LP
Sbjct: 88  NFDNMKDGLYIAPAFMDKLIIHIAKNFMNLP 118

[57][TOP]
>UniRef100_O82428 Rubisco activase n=1 Tax=Datisca glomerata RepID=O82428_DATGL
          Length = 373

 Score = 94.0 bits (232), Expect = 5e-18
 Identities = 62/144 (43%), Positives = 78/144 (54%), Gaps = 1/144 (0%)
 Frame = +3

Query: 3   LLPSTTFRPFIQSALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRW 182
           LLP+T F     S+L+ M            R+   R+A  +++           KQ  + 
Sbjct: 27  LLPNTAF---FGSSLKKMN----------SRLTNPRIAAGNIKAVADD---DEEKQTSKD 70

Query: 183 RSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIED 359
           R      D SDDQQDITRG+ MVD LFQ     G TH AV+SS EYLS   R   +N  D
Sbjct: 71  RWGGLAFDTSDDQQDITRGKGMVDSLFQAPMQTG-THYAVMSSYEYLSTGLRQYLDNNMD 129

Query: 360 GFYISPAFLDKMTIHIAKNFMDLP 431
           GFYI+PAF+DK+ +HI KNFM LP
Sbjct: 130 GFYIAPAFMDKLVVHITKNFMTLP 153

[58][TOP]
>UniRef100_C1K241 Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase n=1 Tax=Solenostemon scutellarioides
           RepID=C1K241_SOLSC
          Length = 436

 Score = 94.0 bits (232), Expect = 5e-18
 Identities = 49/107 (45%), Positives = 72/107 (67%), Gaps = 5/107 (4%)
 Frame = +3

Query: 126 VRRAQLQVVASSRKQM--GRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNA 299
           V     +VVA ++K     RW  +    D SDDQQDI RG+ MVD LFQ   G G TH+A
Sbjct: 48  VSSGSFKVVAEAKKPSPGDRWGGLIE--DVSDDQQDIVRGKGMVDSLFQAPSGMG-THDA 104

Query: 300 VLSSQEYLSQSRASFNNIE---DGFYISPAFLDKMTIHIAKNFMDLP 431
           +++S EY+SQ + ++++++   DG YI+PAF+DK+ +H++KNFM LP
Sbjct: 105 IMNSYEYISQGQKTYDHLDNTLDGLYIAPAFMDKLVVHLSKNFMTLP 151

[59][TOP]
>UniRef100_B9SDY7 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplast, putative n=1 Tax=Ricinus communis
           RepID=B9SDY7_RICCO
          Length = 473

 Score = 93.6 bits (231), Expect = 6e-18
 Identities = 51/87 (58%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
 Frame = +3

Query: 177 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 350
           RW  +    D SDDQQDITRG+ MVD LFQ    AG TH AV+SS EYLS     +N  N
Sbjct: 69  RWGGL--AYDMSDDQQDITRGKGMVDSLFQAPQDAG-THYAVMSSYEYLSTGLRQYNLDN 125

Query: 351 IEDGFYISPAFLDKMTIHIAKNFMDLP 431
             DGFYI+PAF+DK+ +HI KNFM LP
Sbjct: 126 NMDGFYIAPAFMDKLVVHITKNFMTLP 152

[60][TOP]
>UniRef100_B9IFW9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IFW9_POPTR
          Length = 476

 Score = 93.6 bits (231), Expect = 6e-18
 Identities = 55/143 (38%), Positives = 81/143 (56%), Gaps = 2/143 (1%)
 Frame = +3

Query: 9   PSTTFRPFIQSALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRS 188
           PS     F  ++L+T         V G ++   R+ TR+++ A  +     +    +W+ 
Sbjct: 25  PSWPTSAFFDNSLKT---------VLGSKITNQRLLTRNLKLAA-EYDKEKQPSKDKWKG 74

Query: 189 IDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASF--NNIEDG 362
           +    D SDDQQDITRG+ MVD LFQ   G  GTH AV+SS +Y S+    +  +N  DG
Sbjct: 75  L--AFDTSDDQQDITRGKGMVDSLFQAPMGT-GTHYAVMSSYDYTSKGLRQYKLDNNMDG 131

Query: 363 FYISPAFLDKMTIHIAKNFMDLP 431
           FYI+ +F+DK+ +HI KNF+ LP
Sbjct: 132 FYIASSFMDKLVVHITKNFLQLP 154

[61][TOP]
>UniRef100_A7PIQ8 Chromosome chr13 scaffold_17, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7PIQ8_VITVI
          Length = 438

 Score = 93.6 bits (231), Expect = 6e-18
 Identities = 58/131 (44%), Positives = 74/131 (56%), Gaps = 8/131 (6%)
 Frame = +3

Query: 63  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVASSRKQM----GRWRSIDAGVDASDDQQ 224
           ++ SSA  G  +    +R     V     +VVA     M     +W+ +    D SDDQQ
Sbjct: 27  SVPSSAFLGSSLKKVNSRFTHSKVSSGSFKVVAEVDDDMQTEKDKWKGL--AFDTSDDQQ 84

Query: 225 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMT 398
           DI RG+ MVD LFQ    AG TH AV+SS EY+S     +N  N  DGFYI+PAF+DK+ 
Sbjct: 85  DIVRGKGMVDSLFQAPMDAG-THYAVMSSYEYISTGLRQYNLDNNMDGFYIAPAFMDKLV 143

Query: 399 IHIAKNFMDLP 431
           +HI KNFM LP
Sbjct: 144 VHITKNFMTLP 154

[62][TOP]
>UniRef100_A7PNR4 Chromosome chr8 scaffold_23, whole genome shotgun sequence n=2
           Tax=Vitis vinifera RepID=A7PNR4_VITVI
          Length = 474

 Score = 93.2 bits (230), Expect = 8e-18
 Identities = 56/129 (43%), Positives = 75/129 (58%), Gaps = 6/129 (4%)
 Frame = +3

Query: 63  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVAS--SRKQMGRWRSIDAGVDASDDQQDI 230
           ++ SSA  G  +    +++A         +VVA     KQ  + +      D SDDQQDI
Sbjct: 26  SVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEVDEEKQTSKDKWKGLAFDESDDQQDI 85

Query: 231 TRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIH 404
           TRG+ MVD LFQ    +G TH AV+SS +Y+S     +N  N  DGFYI+PAF+DK+ +H
Sbjct: 86  TRGKGMVDSLFQAPMDSG-THYAVMSSYDYISTGLRQYNLDNTMDGFYIAPAFMDKLVVH 144

Query: 405 IAKNFMDLP 431
           I KNFM LP
Sbjct: 145 ITKNFMTLP 153

[63][TOP]
>UniRef100_Q7X999 Ribulose bisphosphate carboxylase/oxygenase activase 2,
           chloroplastic n=1 Tax=Larrea tridentata RepID=RCA2_LARTR
          Length = 435

 Score = 93.2 bits (230), Expect = 8e-18
 Identities = 58/145 (40%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
 Frame = +3

Query: 3   LLPSTTFRPFIQSALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRW 182
           L+PST F  F  S  ++     K+S+      G  ++  + +   Q       +    +W
Sbjct: 27  LVPSTAF--FGSSLKKSAAKFPKASS------GNFKIVAQEISEDQ-------QTDKDKW 71

Query: 183 RSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIE 356
           + +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS +Y+SQ    +N  N  
Sbjct: 72  KGL--AYDISDDQQDITRGKGMVDTLFQAPMQSG-THYAVMSSYDYISQGLRQYNLDNNM 128

Query: 357 DGFYISPAFLDKMTIHIAKNFMDLP 431
           DGFYI+PAF+DK+ +HI KNF+ LP
Sbjct: 129 DGFYIAPAFMDKLVVHITKNFLSLP 153

[64][TOP]
>UniRef100_Q7X9A0 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic n=1 Tax=Larrea tridentata RepID=RCA1_LARTR
          Length = 476

 Score = 93.2 bits (230), Expect = 8e-18
 Identities = 58/145 (40%), Positives = 82/145 (56%), Gaps = 2/145 (1%)
 Frame = +3

Query: 3   LLPSTTFRPFIQSALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRW 182
           L+PST F  F  S  ++     K+S+      G  ++  + +   Q       +    +W
Sbjct: 27  LVPSTAF--FGSSLKKSAAKFPKASS------GNFKIVAQEISEDQ-------QTDKDKW 71

Query: 183 RSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIE 356
           + +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS +Y+SQ    +N  N  
Sbjct: 72  KGL--AYDISDDQQDITRGKGMVDTLFQAPMQSG-THYAVMSSYDYISQGLRQYNLDNNM 128

Query: 357 DGFYISPAFLDKMTIHIAKNFMDLP 431
           DGFYI+PAF+DK+ +HI KNF+ LP
Sbjct: 129 DGFYIAPAFMDKLVVHITKNFLSLP 153

[65][TOP]
>UniRef100_Q06B48 Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase large protein isoform n=2 Tax=Acer rubrum
           RepID=Q06B48_ACERU
          Length = 474

 Score = 91.7 bits (226), Expect = 2e-17
 Identities = 55/130 (42%), Positives = 74/130 (56%), Gaps = 7/130 (5%)
 Frame = +3

Query: 63  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVA----SSRKQMGRWRSIDAGVDASDDQQ 224
           T+ +SA  G  +    +R     V     +VVA    + + +  +WR +    D SDDQQ
Sbjct: 27  TVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGL--AYDTSDDQQ 84

Query: 225 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTI 401
           DITRG+ +VD LFQ   G  GTH AV+SS +Y+S   R    N  DGFYI+P F+ K+ +
Sbjct: 85  DITRGKGLVDSLFQAPSGT-GTHYAVMSSYDYISTGLRTYLENSMDGFYIAPVFMGKLVV 143

Query: 402 HIAKNFMDLP 431
           HI KNFM LP
Sbjct: 144 HITKNFMSLP 153

[66][TOP]
>UniRef100_O49074 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Solanum pennellii RepID=RCA_SOLPN
          Length = 459

 Score = 91.7 bits (226), Expect = 2e-17
 Identities = 51/118 (43%), Positives = 76/118 (64%), Gaps = 4/118 (3%)
 Frame = +3

Query: 90  QRVGGARVATRSVRRAQLQVVASS--RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLF 263
           ++V    V++  V    L+VVA      +  RW+ +    + SDDQQDI RG+ +VD LF
Sbjct: 38  KKVYAKGVSSPKVSNRNLRVVAQEVDETKEDRWKGLYD--NTSDDQQDIARGKGLVDSLF 95

Query: 264 QGGFGAGGTHNAVLSSQEYLSQSRASF--NNIEDGFYISPAFLDKMTIHIAKNFMDLP 431
           Q   G G TH+A+++S EY+SQ+  ++  +N  DGFYI+PAF+DK+ +HI KNF+ LP
Sbjct: 96  QAPTGTG-THHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLP 152

[67][TOP]
>UniRef100_Q9M431 Rubisco activase (Fragment) n=1 Tax=Pinus halepensis
           RepID=Q9M431_PINHA
          Length = 226

 Score = 90.1 bits (222), Expect = 7e-17
 Identities = 43/75 (57%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
 Frame = +3

Query: 213 DDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLS--QSRASFNNIEDGFYISPAFL 386
           DDQQDI RG+  VD LFQ   G+G THNA++SS +Y+S  Q   S +N+ DG+YI+PAF+
Sbjct: 1   DDQQDIRRGKGKVDSLFQAPMGSG-THNAIMSSYDYISTAQRTYSLDNMMDGYYIAPAFM 59

Query: 387 DKMTIHIAKNFMDLP 431
           DK+ +HI+KNFM+LP
Sbjct: 60  DKLVVHISKNFMNLP 74

[68][TOP]
>UniRef100_A9NZT0 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=A9NZT0_PICSI
          Length = 363

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 42/87 (48%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
 Frame = +3

Query: 177 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 350
           +W+ +    D SDDQ DI RG+  VD LFQ   G+G THN V+S+ +Y+S ++ +  F+N
Sbjct: 73  KWKGL--AFDESDDQMDIRRGKGKVDSLFQAPMGSG-THNVVMSTYDYISTAQRTYDFDN 129

Query: 351 IEDGFYISPAFLDKMTIHIAKNFMDLP 431
             DG+YI+P+F+DK+ +HI+KNFM+LP
Sbjct: 130 TMDGYYIAPSFMDKLLVHISKNFMNLP 156

[69][TOP]
>UniRef100_A9NV87 Putative uncharacterized protein n=2 Tax=Picea sitchensis
           RepID=A9NV87_PICSI
          Length = 480

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 42/87 (48%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
 Frame = +3

Query: 177 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 350
           +W+ +    D SDDQ DI RG+  VD LFQ   G+G THN V+S+ +Y+S ++ +  F+N
Sbjct: 73  KWKGL--AFDESDDQMDIRRGKGKVDSLFQAPMGSG-THNVVMSTYDYISTAQRTYDFDN 129

Query: 351 IEDGFYISPAFLDKMTIHIAKNFMDLP 431
             DG+YI+P+F+DK+ +HI+KNFM+LP
Sbjct: 130 TMDGYYIAPSFMDKLLVHISKNFMNLP 156

[70][TOP]
>UniRef100_Q8L5T3 Rubisco activase n=1 Tax=Chenopodium quinoa RepID=Q8L5T3_CHEQI
          Length = 438

 Score = 80.1 bits (196), Expect = 7e-14
 Identities = 46/111 (41%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
 Frame = +3

Query: 105 ARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAG 284
           +R ++ +V+ A  +   S +    RW  +    D SDDQ DI RG+ MVD LFQ    +G
Sbjct: 49  SRASSMTVKAADYE--ESKQSNTDRWAHL--ATDISDDQLDIRRGKGMVDSLFQAPMDSG 104

Query: 285 GTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLP 431
            TH  V SS EY SQ    +N  N+   FYI+P+F+DK+ +HI KN+++LP
Sbjct: 105 -THVPVQSSLEYESQGLRKYNIDNMLGNFYIAPSFMDKIVVHITKNYLNLP 154

[71][TOP]
>UniRef100_C0PQ99 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=C0PQ99_PICSI
          Length = 368

 Score = 77.8 bits (190), Expect = 4e-13
 Identities = 36/71 (50%), Positives = 54/71 (76%), Gaps = 2/71 (2%)
 Frame = +3

Query: 225 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNNIEDGFYISPAFLDKMT 398
           DI RG+  VD LFQ   G+G THN V+S+ +Y+S ++ +  F+N  DG+YI+P+F+DK+ 
Sbjct: 2   DIRRGKGKVDSLFQAPMGSG-THNVVMSTYDYISTAQRTYDFDNTMDGYYIAPSFMDKLL 60

Query: 399 IHIAKNFMDLP 431
           +HI+KNFM+LP
Sbjct: 61  VHISKNFMNLP 71

[72][TOP]
>UniRef100_P10871 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=2 Tax=Spinacia oleracea RepID=RCA_SPIOL
          Length = 472

 Score = 77.8 bits (190), Expect = 4e-13
 Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 2/105 (1%)
 Frame = +3

Query: 123 SVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAV 302
           S R   + V A+  ++    +      D SDDQ DI RG+ MVD LFQ    AG TH  +
Sbjct: 48  SSRTTSMTVKAAENEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAG-THVPI 106

Query: 303 LSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLP 431
            SS EY SQ    ++  N+   FYI+PAF+DK+ +HI KNF++LP
Sbjct: 107 QSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLP 151

[73][TOP]
>UniRef100_Q9ATC1 Rubisco activase (Fragment) n=1 Tax=Zantedeschia aethiopica
           RepID=Q9ATC1_ZANAE
          Length = 334

 Score = 63.5 bits (153), Expect = 7e-09
 Identities = 30/50 (60%), Positives = 37/50 (74%), Gaps = 2/50 (4%)
 Frame = +3

Query: 288 THNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLP 431
           THN VLSS EY+S    SFN  N  +G YI+PAF+DK+ +HI KNFM+LP
Sbjct: 1   THNPVLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLP 50