AV637454 ( HC073d01_r )

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[1][TOP]
>UniRef100_Q6SA05 Rubisco activase n=1 Tax=Chlamydomonas reinhardtii
           RepID=Q6SA05_CHLRE
          Length = 408

 Score =  252 bits (643), Expect = 1e-65
 Identities = 128/128 (100%), Positives = 128/128 (100%)
 Frame = +1

Query: 43  MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 222
           MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT
Sbjct: 1   MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 60

Query: 223 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 402
           RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK
Sbjct: 61  RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 120

Query: 403 NFMDLPKI 426
           NFMDLPKI
Sbjct: 121 NFMDLPKI 128

[2][TOP]
>UniRef100_P23489 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Chlamydomonas reinhardtii RepID=RCA_CHLRE
          Length = 408

 Score =  250 bits (638), Expect = 4e-65
 Identities = 127/128 (99%), Positives = 127/128 (99%)
 Frame = +1

Query: 43  MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 222
           MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVA SRKQMGRWRSIDAGVDASDDQQDIT
Sbjct: 1   MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVAPSRKQMGRWRSIDAGVDASDDQQDIT 60

Query: 223 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 402
           RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK
Sbjct: 61  RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 120

Query: 403 NFMDLPKI 426
           NFMDLPKI
Sbjct: 121 NFMDLPKI 128

[3][TOP]
>UniRef100_O04772 Rubisco activase n=1 Tax=Chlorococcum littorale RepID=O04772_CHLLO
          Length = 403

 Score =  158 bits (399), Expect = 2e-37
 Identities = 80/128 (62%), Positives = 99/128 (77%)
 Frame = +1

Query: 43  MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 222
           MQ+ MK++A    +  GA+ A ++VR   +    +S+ Q GRW +IDAG D SDDQQDIT
Sbjct: 1   MQMQMKNTAF---KATGAKTAPKAVR---VPACKASKSQAGRWAAIDAGNDMSDDQQDIT 54

Query: 223 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 402
           RGR+MVD LFQG    GGTH+AVLSS++YLS +  +FNN+EDGFYISPAFLDKMTIH+AK
Sbjct: 55  RGRDMVDSLFQGPGSGGGTHSAVLSSEDYLSTASRNFNNVEDGFYISPAFLDKMTIHVAK 114

Query: 403 NFMDLPKI 426
           NFMDLPKI
Sbjct: 115 NFMDLPKI 122

[4][TOP]
>UniRef100_C1MPQ3 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast
           n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MPQ3_9CHLO
          Length = 419

 Score =  114 bits (285), Expect = 3e-24
 Identities = 63/134 (47%), Positives = 82/134 (61%), Gaps = 8/134 (5%)
 Frame = +1

Query: 49  VTMKSSAVSGQRVGGARVATRSVRRAQLQVVASS-------RKQMGRWRSIDAGVDASDD 207
           VTM S      ++G    A   V R QL  V +        + QM RW+ +D   D SDD
Sbjct: 4   VTMSSMIAPVAKIG----AVGKVARHQLGSVPNQLGKGNGMKVQMSRWKGMDE--DISDD 57

Query: 208 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIED-GFYISPAFLDKM 384
           QQDI RGR MVD  FQGGFG GGT NA++   +Y+S      +N+ D G+YIS +++DK+
Sbjct: 58  QQDIARGRGMVDSKFQGGFGLGGTQNAIMQGSDYVSDGFKDLSNMSDEGYYISKSYMDKI 117

Query: 385 TIHIAKNFMDLPKI 426
           T+H+AKNFMDLPKI
Sbjct: 118 TVHVAKNFMDLPKI 131

[5][TOP]
>UniRef100_C1E4S4 Ribulose bisphosphate carboxylase/oxygenase activase,chloroplast
           n=1 Tax=Micromonas sp. RCC299 RepID=C1E4S4_9CHLO
          Length = 413

 Score =  114 bits (285), Expect = 3e-24
 Identities = 56/95 (58%), Positives = 67/95 (70%), Gaps = 1/95 (1%)
 Frame = +1

Query: 145 SSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSR 324
           S    M RW+ +D   D SDDQQDI RGR MVD  FQGGFG GGTHNAV+SS +Y+S   
Sbjct: 38  SKTVMMSRWKGMDE--DISDDQQDIARGRNMVDSKFQGGFGLGGTHNAVMSSSDYVSDGF 95

Query: 325 ASFNNIED-GFYISPAFLDKMTIHIAKNFMDLPKI 426
              +N+ D G+YIS  F+D+  +HIAKNFMDLPKI
Sbjct: 96  KDVSNMTDEGYYISKGFMDRFCVHIAKNFMDLPKI 130

[6][TOP]
>UniRef100_A4RW20 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4RW20_OSTLU
          Length = 415

 Score =  114 bits (285), Expect = 3e-24
 Identities = 60/131 (45%), Positives = 82/131 (62%), Gaps = 5/131 (3%)
 Frame = +1

Query: 49  VTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRK-QMGRWRSIDAGVDASDDQQDITR 225
           +T     V         VA ++   A++  V++  K +M RW+ +D  +D SDDQQDI R
Sbjct: 4   ITQPRCGVKANATAKRAVAPKTFLGARVSSVSNGSKVEMSRWKGMD--MDISDDQQDIAR 61

Query: 226 GREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASF----NNIEDGFYISPAFLDKMTIH 393
           GR MVD  FQG  G GGTHNAV+SSQ+YLS    ++    N   + FYISP+++DK+ +H
Sbjct: 62  GRNMVDSKFQGATGIGGTHNAVMSSQDYLSAGMKTYSAHDNITTENFYISPSYMDKVIVH 121

Query: 394 IAKNFMDLPKI 426
           +AKNFM LPKI
Sbjct: 122 VAKNFMKLPKI 132

[7][TOP]
>UniRef100_Q01AY1 RuBisCO activase (IC) n=1 Tax=Ostreococcus tauri RepID=Q01AY1_OSTTA
          Length = 407

 Score =  112 bits (280), Expect = 1e-23
 Identities = 64/135 (47%), Positives = 85/135 (62%), Gaps = 4/135 (2%)
 Frame = +1

Query: 34  LRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQ 213
           +R    T K  AV+ +   GARV++         V   S+ +M RW+ +D  +D SDDQQ
Sbjct: 1   MRQANATTKR-AVAPKTFLGARVSS---------VSNGSKVEMSRWKGMD--MDISDDQQ 48

Query: 214 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASF----NNIEDGFYISPAFLDK 381
           DI RG+ MVD  FQGG G GGTHNAV+SSQ+YLS    ++    N   + FYIS +++DK
Sbjct: 49  DIARGKNMVDSKFQGGAGIGGTHNAVMSSQDYLSAGMKTYDGHDNITAENFYISKSYMDK 108

Query: 382 MTIHIAKNFMDLPKI 426
           + +HIAKNFM LPKI
Sbjct: 109 VVVHIAKNFMQLPKI 123

[8][TOP]
>UniRef100_A9RES5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RES5_PHYPA
          Length = 477

 Score =  109 bits (272), Expect = 1e-22
 Identities = 67/152 (44%), Positives = 92/152 (60%), Gaps = 19/152 (12%)
 Frame = +1

Query: 28  SALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVAS-----------------SRK 156
           +AL++  V   +S V+   VG + V + +    + +V AS                 S K
Sbjct: 6   TALQSASVAQVNSGVAPSTVGKSAVPSSAFLGCKSKVPASAALGLAKGKSRVVAEAESSK 65

Query: 157 QMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN 336
           ++ RW  +  G D SDDQQDI RG+ +VD LFQG  G G T NAVLSS +Y+SQ + +++
Sbjct: 66  KVDRWAGL--GTDISDDQQDIQRGKGLVDALFQGPQGMG-TQNAVLSSWDYISQGQRTYS 122

Query: 337 --NIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
             NI+DG YI+PAF+DK+ IHIAKNFMDLP I
Sbjct: 123 MDNIKDGLYIAPAFMDKLVIHIAKNFMDLPGI 154

[9][TOP]
>UniRef100_O98997 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Vigna radiata var. radiata RepID=RCA_PHAAU
          Length = 439

 Score =  108 bits (269), Expect = 2e-22
 Identities = 59/117 (50%), Positives = 75/117 (64%), Gaps = 2/117 (1%)
 Frame = +1

Query: 82  RVGGARVATRSVR--RAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQ 255
           RV  ++V   S +   A+ ++  S +    RW+ +    D SDDQQDITRG+ MVD LFQ
Sbjct: 44  RVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGL--AYDISDDQQDITRGKGMVDPLFQ 101

Query: 256 GGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
               AG TH AV+SS EYLS      +NI+DGFYI+PAFLDK+ +HI KNFM LP I
Sbjct: 102 APMDAG-THYAVMSSYEYLSTGLRQLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNI 157

[10][TOP]
>UniRef100_A9TJI2 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TJI2_PHYPA
          Length = 471

 Score =  107 bits (266), Expect = 5e-22
 Identities = 63/130 (48%), Positives = 86/130 (66%), Gaps = 5/130 (3%)
 Frame = +1

Query: 52  TMKSSAVSGQRVGGARVATRSVRRAQLQVVA---SSRKQMGRWRSIDAGVDASDDQQDIT 222
           T+ SSA  G +   +   T  +   + +VVA   SS+ ++ RW  +  G D SDDQQDI 
Sbjct: 21  TVPSSAFFGCKSKVSANGTLGIANGKSRVVAEAESSKTKVDRWAGL--GNDISDDQQDIQ 78

Query: 223 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHI 396
           RG+ MVD LFQG  G G T NA++SS  Y+SQ + +++  NI+DG YI+PAF+DK+ IHI
Sbjct: 79  RGKGMVDALFQGAQGLG-TQNAIMSSWGYVSQGQRTYSMDNIKDGLYIAPAFMDKLVIHI 137

Query: 397 AKNFMDLPKI 426
           AKNFM+LP I
Sbjct: 138 AKNFMNLPGI 147

[11][TOP]
>UniRef100_B9HMK4 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
           RepID=B9HMK4_POPTR
          Length = 438

 Score =  106 bits (265), Expect = 7e-22
 Identities = 63/135 (46%), Positives = 82/135 (60%), Gaps = 10/135 (7%)
 Frame = +1

Query: 52  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVASS-----RKQMGRWRSIDAGVDASDD 207
           T+ +SA  G   ++V  +R     +     +VVA       + +  RW  +    D SDD
Sbjct: 26  TVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVT--DMSDD 83

Query: 208 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDK 381
           QQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DGFYI+PAF+DK
Sbjct: 84  QQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGFYIAPAFMDK 142

Query: 382 MTIHIAKNFMDLPKI 426
           + +HI+KNFM LP I
Sbjct: 143 IVVHISKNFMSLPNI 157

[12][TOP]
>UniRef100_A9PFQ2 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=A9PFQ2_POPTR
          Length = 475

 Score =  106 bits (265), Expect = 7e-22
 Identities = 63/135 (46%), Positives = 82/135 (60%), Gaps = 10/135 (7%)
 Frame = +1

Query: 52  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVASS-----RKQMGRWRSIDAGVDASDD 207
           T+ +SA  G   ++V  +R     +     +VVA       + +  RW  +    D SDD
Sbjct: 26  TVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVT--DMSDD 83

Query: 208 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDK 381
           QQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DGFYI+PAF+DK
Sbjct: 84  QQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGFYIAPAFMDK 142

Query: 382 MTIHIAKNFMDLPKI 426
           + +HI+KNFM LP I
Sbjct: 143 IVVHISKNFMSLPNI 157

[13][TOP]
>UniRef100_B1PDJ9 Chloroplast rubisco activase n=1 Tax=Capsicum annuum
           RepID=B1PDJ9_CAPAN
          Length = 439

 Score =  106 bits (264), Expect = 9e-22
 Identities = 58/123 (47%), Positives = 79/123 (64%), Gaps = 4/123 (3%)
 Frame = +1

Query: 70  VSGQRVGGARVATRSVRRAQLQVVASSRKQMG--RWRSIDAGVDASDDQQDITRGREMVD 243
           V G+ +   +V+ RS+R    +     +KQ    RW+ +  G D SDDQQDI RG+ MVD
Sbjct: 40  VYGKGISSPKVSNRSLRIVAEEKEIDEKKQTDGDRWKGL--GTDVSDDQQDIARGKGMVD 97

Query: 244 DLFQGGFGAGGTHNAVLSSQEYLSQ--SRASFNNIEDGFYISPAFLDKMTIHIAKNFMDL 417
            LFQ   G  GTH+A+++S EYLSQ   + S +N  DGFYI+PAF+DK+ +HI KNF+ L
Sbjct: 98  SLFQAPTGT-GTHHAIMNSYEYLSQGLKQYSMDNKLDGFYIAPAFMDKLVVHITKNFLQL 156

Query: 418 PKI 426
           P I
Sbjct: 157 PNI 159

[14][TOP]
>UniRef100_O64981 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Phaseolus vulgaris RepID=RCA_PHAVU
          Length = 441

 Score =  106 bits (264), Expect = 9e-22
 Identities = 63/134 (47%), Positives = 85/134 (63%), Gaps = 12/134 (8%)
 Frame = +1

Query: 61  SSAVSG---QRVGGARVATRSVRRAQLQVVASSRK-------QMGRWRSIDAGVDASDDQ 210
           SSA  G   ++V  +RV    +     ++VA+ ++       +  RWR +    D SDDQ
Sbjct: 29  SSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGL--AYDVSDDQ 86

Query: 211 QDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKM 384
           QDITRG+ +VD LFQ    AG TH AV+SS +YLS    + +F+NI+DGFYI+PAFLDK+
Sbjct: 87  QDITRGKGLVDSLFQAPMDAG-THYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKL 145

Query: 385 TIHIAKNFMDLPKI 426
            +HIAKNFM LP I
Sbjct: 146 VVHIAKNFMTLPNI 159

[15][TOP]
>UniRef100_A9PJF4 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
           Populus deltoides RepID=A9PJF4_9ROSI
          Length = 461

 Score =  105 bits (262), Expect = 2e-21
 Identities = 62/135 (45%), Positives = 82/135 (60%), Gaps = 10/135 (7%)
 Frame = +1

Query: 52  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVASS-----RKQMGRWRSIDAGVDASDD 207
           T+ +SA  G   ++V  +R     +     +VVA       + +  RW  +    D SDD
Sbjct: 26  TVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVT--DMSDD 83

Query: 208 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDK 381
           QQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DG+YI+PAF+DK
Sbjct: 84  QQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGYYIAPAFMDK 142

Query: 382 MTIHIAKNFMDLPKI 426
           + +HI+KNFM LP I
Sbjct: 143 IVVHISKNFMSLPNI 157

[16][TOP]
>UniRef100_A9PJ06 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
           Populus deltoides RepID=A9PJ06_9ROSI
          Length = 476

 Score =  105 bits (262), Expect = 2e-21
 Identities = 62/132 (46%), Positives = 81/132 (61%), Gaps = 7/132 (5%)
 Frame = +1

Query: 52  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVAS--SRKQMGRWRSIDAGVDASDDQQD 216
           T+ +SA  G   ++V  +R     +     +VVA    +KQ  + R      D SDDQQD
Sbjct: 26  TVPNSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEYDEKKQTDKDRWGGLVTDMSDDQQD 85

Query: 217 ITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTI 390
           ITRG+ MVD LFQ   G G THN +LSS EYLSQ   ++N  N  DG+YI+PAF+DK+ +
Sbjct: 86  ITRGKGMVDSLFQAPQGTG-THNPILSSYEYLSQGLRTYNLDNNMDGYYIAPAFMDKLVV 144

Query: 391 HIAKNFMDLPKI 426
           HI+KNFM LP I
Sbjct: 145 HISKNFMSLPNI 156

[17][TOP]
>UniRef100_Q40460 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic n=1 Tax=Nicotiana tabacum RepID=RCA1_TOBAC
          Length = 442

 Score =  105 bits (261), Expect = 2e-21
 Identities = 60/123 (48%), Positives = 77/123 (62%), Gaps = 4/123 (3%)
 Frame = +1

Query: 70  VSGQRVGGARVATRSVRRAQLQVVASSRKQMG--RWRSIDAGVDASDDQQDITRGREMVD 243
           V G+ V   +V  +S+R    Q+    +KQ    RW+ +    D SDDQQDITRG+ MVD
Sbjct: 40  VYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQ--DFSDDQQDITRGKGMVD 97

Query: 244 DLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDL 417
            LFQ   G  GTH+AVL S EY+SQ    +N  N  DGFYI+PAF+DK+ +HI KNF+ L
Sbjct: 98  SLFQAPTGT-GTHHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKL 156

Query: 418 PKI 426
           P I
Sbjct: 157 PNI 159

[18][TOP]
>UniRef100_Q40565 Ribulose bisphosphate carboxylase/oxygenase activase 2,
           chloroplastic n=1 Tax=Nicotiana tabacum RepID=RCA2_TOBAC
          Length = 439

 Score =  103 bits (258), Expect = 5e-21
 Identities = 60/123 (48%), Positives = 77/123 (62%), Gaps = 4/123 (3%)
 Frame = +1

Query: 70  VSGQRVGGARVATRSVRRAQLQVVASSRKQM--GRWRSIDAGVDASDDQQDITRGREMVD 243
           V G+ V   +V  RS+R A  +  A  +KQ    RW+ +    D SDDQQDI RG+ MVD
Sbjct: 40  VYGKGVSSPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQ--DFSDDQQDIARGKGMVD 97

Query: 244 DLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDL 417
            LFQ   G G TH+AVL S EY+SQ    +N  N  DGFYI+P+F+DK+ +HI KNF+ L
Sbjct: 98  SLFQAPTGTG-THHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKL 156

Query: 418 PKI 426
           P I
Sbjct: 157 PNI 159

[19][TOP]
>UniRef100_C5Y1T6 Putative uncharacterized protein Sb05g027880 n=1 Tax=Sorghum
           bicolor RepID=C5Y1T6_SORBI
          Length = 473

 Score =  103 bits (257), Expect = 6e-21
 Identities = 56/117 (47%), Positives = 76/117 (64%), Gaps = 1/117 (0%)
 Frame = +1

Query: 79  QRVGGARVATRSVRRAQLQVVASSRK-QMGRWRSIDAGVDASDDQQDITRGREMVDDLFQ 255
           Q+ G   +  R++     Q V  +++ +  RWR +    D SDDQQDITRG+ M+D LFQ
Sbjct: 48  QQGGRGLIIIRAMAAVNKQEVDETKQTEQDRWRGL--AYDTSDDQQDITRGKGMIDSLFQ 105

Query: 256 GGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
              G  GTH AVLSS +Y+SQ    +N + DG+YI+PAF+DK+ +HIAKNFM LP I
Sbjct: 106 APMG-DGTHVAVLSSYDYISQGLRQYNTM-DGYYIAPAFMDKLVLHIAKNFMTLPNI 160

[20][TOP]
>UniRef100_Q9M4V3 Ribulose bisphosphate carboxylase activase B n=1 Tax=Triticum
           aestivum RepID=Q9M4V3_WHEAT
          Length = 432

 Score =  103 bits (256), Expect = 8e-21
 Identities = 56/117 (47%), Positives = 75/117 (64%), Gaps = 4/117 (3%)
 Frame = +1

Query: 88  GGARVATRSVRR--AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGG 261
           GG ++  R VR   A+ ++    +    RW+ +    D SDDQQDITRG+ +VD LFQ  
Sbjct: 36  GGNKINNRVVRAMAAKKELDEGKQTDADRWKGL--AYDISDDQQDITRGKGIVDSLFQAP 93

Query: 262 FGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
            G  GTH A+LSS EY+SQ   +  F+N  DG YI+PAF+DK+ +H+AKNFM LP I
Sbjct: 94  MG-DGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNI 149

[21][TOP]
>UniRef100_Q42450 Ribulose bisphosphate carboxylase/oxygenase activase B,
           chloroplastic n=1 Tax=Hordeum vulgare RepID=RCAB_HORVU
          Length = 425

 Score =  103 bits (256), Expect = 8e-21
 Identities = 56/117 (47%), Positives = 76/117 (64%), Gaps = 4/117 (3%)
 Frame = +1

Query: 88  GGARVATRSVR--RAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGG 261
           GG ++ +R VR   A+ ++    +    RW+ +    D SDDQQDITRG+ +VD LFQ  
Sbjct: 30  GGNKMKSRVVRVMAAKKELDQGKQTDADRWKGL--AYDISDDQQDITRGKGIVDSLFQAP 87

Query: 262 FGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
            G  GTH A+LSS EY+SQ   +  F+N  DG YI+PAF+DK+ +H+AKNFM LP I
Sbjct: 88  MG-DGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNI 143

[22][TOP]
>UniRef100_Q9ATC2 Rubisco activase (Fragment) n=2 Tax=Zantedeschia aethiopica
           RepID=Q9ATC2_ZANAE
          Length = 436

 Score =  102 bits (255), Expect = 1e-20
 Identities = 56/116 (48%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
 Frame = +1

Query: 85  VGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGF 264
           +G  R +T +++     +  S + +  RW  +    D SDDQQDITRG+ MVD LFQ   
Sbjct: 5   LGHGRTSTGTLKVMAADLDESKQTKTDRWAGLYT--DTSDDQQDITRGKGMVDSLFQAPM 62

Query: 265 GAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           G  GTHN VLSS EY+S    SFN  N  +G YI+PAF+DK+ +HI KNFM+LP I
Sbjct: 63  G-DGTHNPVLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLPNI 117

[23][TOP]
>UniRef100_Q9ATB9 Rubisco activase (Fragment) n=1 Tax=Zantedeschia aethiopica
           RepID=Q9ATB9_ZANAE
          Length = 435

 Score =  102 bits (255), Expect = 1e-20
 Identities = 56/116 (48%), Positives = 73/116 (62%), Gaps = 2/116 (1%)
 Frame = +1

Query: 85  VGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGF 264
           +G  R +T +++     +  S + +  RW  +    D SDDQQDITRG+ MVD LFQ   
Sbjct: 41  LGHGRTSTGTLKVMAADLDESKQTKTDRWAGLYT--DTSDDQQDITRGKGMVDSLFQAPM 98

Query: 265 GAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           G  GTHN VLSS EY+S    SFN  N  +G YI+PAF+DK+ +HI KNFM+LP I
Sbjct: 99  G-DGTHNPVLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLPNI 153

[24][TOP]
>UniRef100_Q941B7 At2g39730/T5I7.3 n=1 Tax=Arabidopsis thaliana RepID=Q941B7_ARATH
          Length = 474

 Score =  102 bits (255), Expect = 1e-20
 Identities = 52/89 (58%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
 Frame = +1

Query: 166 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 339
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 340 IEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           + DGFYI+PAF+DK+ +HI KNF+ LP I
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNI 155

[25][TOP]
>UniRef100_Q8H172 At2g39730/T5I7.3 n=1 Tax=Arabidopsis thaliana RepID=Q8H172_ARATH
          Length = 474

 Score =  102 bits (255), Expect = 1e-20
 Identities = 52/89 (58%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
 Frame = +1

Query: 166 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 339
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 340 IEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           + DGFYI+PAF+DK+ +HI KNF+ LP I
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNI 155

[26][TOP]
>UniRef100_Q3EBJ5 Putative uncharacterized protein At2g39730.3 n=1 Tax=Arabidopsis
           thaliana RepID=Q3EBJ5_ARATH
          Length = 441

 Score =  102 bits (255), Expect = 1e-20
 Identities = 52/89 (58%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
 Frame = +1

Query: 166 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 339
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 340 IEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           + DGFYI+PAF+DK+ +HI KNF+ LP I
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNI 155

[27][TOP]
>UniRef100_P10896-2 Isoform Short of Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic n=1 Tax=Arabidopsis thaliana
           RepID=P10896-2
          Length = 446

 Score =  102 bits (255), Expect = 1e-20
 Identities = 52/89 (58%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
 Frame = +1

Query: 166 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 339
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 340 IEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           + DGFYI+PAF+DK+ +HI KNF+ LP I
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNI 155

[28][TOP]
>UniRef100_P10896 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Arabidopsis thaliana RepID=RCA_ARATH
          Length = 474

 Score =  102 bits (255), Expect = 1e-20
 Identities = 52/89 (58%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
 Frame = +1

Query: 166 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 339
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 340 IEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           + DGFYI+PAF+DK+ +HI KNF+ LP I
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNI 155

[29][TOP]
>UniRef100_C5J0I3 Chloroplast rubisco activase n=1 Tax=Cucumis sativus
           RepID=C5J0I3_CUCSA
          Length = 611

 Score =  102 bits (254), Expect = 1e-20
 Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 7/129 (5%)
 Frame = +1

Query: 61  SSAVSGQRVG-GARVATRSVRRAQLQVVASS----RKQMGRWRSIDAGVDASDDQQDITR 225
           +SA  G R+   +R  T  +     ++VA      + +  +WR +    D SDDQQDITR
Sbjct: 27  NSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGL--AFDTSDDQQDITR 84

Query: 226 GREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRA--SFNNIEDGFYISPAFLDKMTIHIA 399
           G+ + D LFQ   G G THNAVLSS EY+S      S++N  DGFYI+PAF+DK+T+HI 
Sbjct: 85  GKGLADPLFQAPMGTG-THNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIV 143

Query: 400 KNFMDLPKI 426
           KNF+ LP I
Sbjct: 144 KNFLTLPNI 152

[30][TOP]
>UniRef100_Q01587 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Cucumis sativus RepID=RCA_CUCSA
          Length = 413

 Score =  102 bits (254), Expect = 1e-20
 Identities = 59/129 (45%), Positives = 79/129 (61%), Gaps = 7/129 (5%)
 Frame = +1

Query: 61  SSAVSGQRVG-GARVATRSVRRAQLQVVASS----RKQMGRWRSIDAGVDASDDQQDITR 225
           +SA  G R+   +R  T  +     ++VA      + +  +WR +    D SDDQQDITR
Sbjct: 27  NSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGL--AFDTSDDQQDITR 84

Query: 226 GREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRA--SFNNIEDGFYISPAFLDKMTIHIA 399
           G+ + D LFQ   G G THNAVLSS EY+S      S++N  DGFYI+PAF+DK+T+HI 
Sbjct: 85  GKGLADPLFQAPMGTG-THNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIV 143

Query: 400 KNFMDLPKI 426
           KNF+ LP I
Sbjct: 144 KNFLTLPNI 152

[31][TOP]
>UniRef100_Q9AXG0 Ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2
           (Fragment) n=1 Tax=Gossypium hirsutum RepID=Q9AXG0_GOSHI
          Length = 435

 Score =  102 bits (253), Expect = 2e-20
 Identities = 53/106 (50%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
 Frame = +1

Query: 115 VRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVL 294
           V  A+ ++   ++ +  RW+ +    D SDDQQDITRG+ MVD LFQ      GTH AV+
Sbjct: 14  VMAAEKEIDEETQTEKDRWKGL--AYDISDDQQDITRGKGMVDSLFQAPMN-DGTHYAVM 70

Query: 295 SSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           SS EY+SQ   ++N  N  DGFYI+PAF+DK+ +HI+KNFM LP I
Sbjct: 71  SSYEYISQGLKTYNLDNNMDGFYIAPAFMDKLVVHISKNFMSLPNI 116

[32][TOP]
>UniRef100_C5Y1T5 Putative uncharacterized protein Sb05g027870 n=1 Tax=Sorghum
           bicolor RepID=C5Y1T5_SORBI
          Length = 440

 Score =  102 bits (253), Expect = 2e-20
 Identities = 61/142 (42%), Positives = 86/142 (60%), Gaps = 6/142 (4%)
 Frame = +1

Query: 19  FIQSALRTMQVTMKSSAVSGQRVGGARVATRSVRR----AQLQVVASSRKQMGRWRSIDA 186
           F+   L   QV+  ++AV+      +  A  +V R    A  +V  + +    RW+ +  
Sbjct: 21  FLGKKLSKQQVSA-AAAVNYYHGKSSSSAAANVNRFKVMAAKEVDETKQSDQDRWKGL-- 77

Query: 187 GVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRA--SFNNIEDGFYI 360
             D SDDQQDITRG+ M+D LFQ   G  GTH AVLSS +Y+SQ +   SF+N+ DGFYI
Sbjct: 78  AYDVSDDQQDITRGKGMIDSLFQAPMG-DGTHVAVLSSYDYISQGQKTYSFDNMMDGFYI 136

Query: 361 SPAFLDKMTIHIAKNFMDLPKI 426
           S +F+DK+ +H++KNFM LP I
Sbjct: 137 SKSFMDKLVVHLSKNFMSLPNI 158

[33][TOP]
>UniRef100_Q308Y6 Ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2
           n=1 Tax=Gossypium hirsutum RepID=Q308Y6_GOSHI
          Length = 421

 Score =  101 bits (252), Expect = 2e-20
 Identities = 53/103 (51%), Positives = 69/103 (66%), Gaps = 2/103 (1%)
 Frame = +1

Query: 124 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 303
           A+ ++   ++ +  RW+ +    D SDDQQDITRG+ MVD LFQ      GTH AV+SS 
Sbjct: 3   AEKEIDEETQTEKDRWKGL--AYDISDDQQDITRGKGMVDSLFQAPMN-DGTHYAVMSSY 59

Query: 304 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           EYLSQ   ++N  N  DGFYI+PAF+DK+ +HI KNFM LP I
Sbjct: 60  EYLSQGLKTYNLDNNMDGFYIAPAFMDKLVVHITKNFMSLPNI 102

[34][TOP]
>UniRef100_C0P5X6 Putative uncharacterized protein n=1 Tax=Zea mays
           RepID=C0P5X6_MAIZE
          Length = 463

 Score =  101 bits (252), Expect = 2e-20
 Identities = 56/110 (50%), Positives = 73/110 (66%), Gaps = 2/110 (1%)
 Frame = +1

Query: 103 ATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTH 282
           AT ++R   + V  +   +  RWR +   +D SDDQQDITRG+  VD LFQ   G  GTH
Sbjct: 45  ATTTIRVRAMAV--NKETEQDRWRGL--ALDTSDDQQDITRGKGRVDPLFQAPMG-DGTH 99

Query: 283 NAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
            AVLSS +Y+SQ     S +N+ DG+YI+PAF+DK+ +HIAKNFM LP I
Sbjct: 100 VAVLSSYDYISQGLRHYSLDNMMDGYYIAPAFMDKLVVHIAKNFMPLPNI 149

[35][TOP]
>UniRef100_A9UHW7 Rubisco activase n=1 Tax=Ipomoea batatas RepID=A9UHW7_IPOBA
          Length = 439

 Score =  100 bits (249), Expect = 5e-20
 Identities = 53/103 (51%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
 Frame = +1

Query: 124 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 303
           AQ ++  S +    RW+ +    D SDDQQDITRG+ +VD LFQ   G G TH+AVLSS 
Sbjct: 57  AQPEIDESKQTHEDRWKGLVE--DISDDQQDITRGKGLVDTLFQAPMGTG-THHAVLSSY 113

Query: 304 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           EY+SQ + +++  N  DGFYI+PAF+DK+ +HI KNF+ LP I
Sbjct: 114 EYVSQGQKTYSLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNI 156

[36][TOP]
>UniRef100_A8W9B0 Chloroplast ribulose 1,5-bisphosphate carboxylase/oxygenase
           activase n=1 Tax=Flaveria bidentis RepID=A8W9B0_FLABI
          Length = 438

 Score =  100 bits (249), Expect = 5e-20
 Identities = 56/126 (44%), Positives = 76/126 (60%), Gaps = 1/126 (0%)
 Frame = +1

Query: 52  TMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGR 231
           ++K    S   V   + +T  +  A+ ++  + +    RWR +    D SDDQQDITRG+
Sbjct: 31  SLKKIVNSRHAVNNNKFSTFKIFAAEKEIEETKQTDKDRWRGL--AYDMSDDQQDITRGK 88

Query: 232 EMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTIHIAKNF 408
            MVD LFQ    +G TH AV+SS EY+S   R   +N  DGFYI+PAF+DK+ +HI KNF
Sbjct: 89  GMVDSLFQAPQDSG-THFAVMSSYEYISTGLRTYLDNNMDGFYIAPAFMDKLVVHITKNF 147

Query: 409 MDLPKI 426
           M LP I
Sbjct: 148 MTLPNI 153

[37][TOP]
>UniRef100_A9TBN9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TBN9_PHYPA
          Length = 455

 Score =  100 bits (248), Expect = 7e-20
 Identities = 60/138 (43%), Positives = 85/138 (61%), Gaps = 5/138 (3%)
 Frame = +1

Query: 28  SALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASS---RKQMGRWRSIDAGVDA 198
           SA  T + T+ SSA+ G     +   T  V + + +VV  +   +K++ RW  +  G D 
Sbjct: 21  SAQATSKSTLPSSALFGCSSKVSVNVTLGVAKGKSRVVCEAEGEKKKVDRWAGL--GNDI 78

Query: 199 SDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAF 372
           SDDQQDI RG+ MVD LFQG  G G T    +SS +Y+S ++ ++N  N  DG YI+PAF
Sbjct: 79  SDDQQDIQRGKGMVDALFQGATGLG-TQVVTMSSWDYVSTAQRTYNFDNTSDGLYIAPAF 137

Query: 373 LDKMTIHIAKNFMDLPKI 426
           +DK+ IH+ KNFM+LP I
Sbjct: 138 MDKLVIHVCKNFMNLPGI 155

[38][TOP]
>UniRef100_A9PG25 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=A9PG25_POPTR
          Length = 361

 Score =  100 bits (248), Expect = 7e-20
 Identities = 51/78 (65%), Positives = 60/78 (76%), Gaps = 2/78 (2%)
 Frame = +1

Query: 199 SDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAF 372
           SDDQQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DGFYI+PAF
Sbjct: 2   SDDQQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGFYIAPAF 60

Query: 373 LDKMTIHIAKNFMDLPKI 426
           +DK+ +HI+KNFM LP I
Sbjct: 61  MDKIVVHISKNFMSLPNI 78

[39][TOP]
>UniRef100_A9TBP0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TBP0_PHYPA
          Length = 445

 Score = 99.4 bits (246), Expect = 1e-19
 Identities = 58/131 (44%), Positives = 83/131 (63%), Gaps = 6/131 (4%)
 Frame = +1

Query: 52  TMKSSAVSGQRVGGARVATRSVRRAQLQVVASS----RKQMGRWRSIDAGVDASDDQQDI 219
           T+ +SA  G +   +   T  V + + +VV  +    +K++ RW  +  G D SDDQQDI
Sbjct: 28  TLPNSAFLGCKSKVSANVTLGVAKGKSRVVCEAEGEKKKKVDRWAGL--GNDISDDQQDI 85

Query: 220 TRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIH 393
            RG+ MVD LFQG  G G T    +SS +Y+S  + ++N  N++DG YI+PAF+DK+ IH
Sbjct: 86  QRGKGMVDALFQGAVGLG-TQVVTMSSWDYVSTGQRTYNFDNMKDGLYIAPAFMDKLIIH 144

Query: 394 IAKNFMDLPKI 426
           IAKNFM+LP I
Sbjct: 145 IAKNFMNLPGI 155

[40][TOP]
>UniRef100_B9T427 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplast, putative n=1 Tax=Ricinus communis
           RepID=B9T427_RICCO
          Length = 474

 Score = 98.6 bits (244), Expect = 2e-19
 Identities = 55/115 (47%), Positives = 73/115 (63%), Gaps = 4/115 (3%)
 Frame = +1

Query: 94  ARVATRSVRRAQLQVVAS--SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFG 267
           +++  + +    L+V A    +KQ  + R      D SDDQQDITRG+ MVD LFQ   G
Sbjct: 42  SKIIHQKILSGNLKVSAEYDEQKQTDKDRWGGLAYDISDDQQDITRGKGMVDSLFQAPMG 101

Query: 268 AGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
            G TH AV+SS +YLSQ    +N  N  DGFYI+PAF+DK+ +HI KNF++LP I
Sbjct: 102 TG-THYAVMSSYDYLSQGLRQYNLDNNMDGFYIAPAFMDKVVVHITKNFLNLPNI 155

[41][TOP]
>UniRef100_B9HT80 Predicted protein (Fragment) n=2 Tax=Populus trichocarpa
           RepID=B9HT80_POPTR
          Length = 424

 Score = 98.6 bits (244), Expect = 2e-19
 Identities = 53/94 (56%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
 Frame = +1

Query: 151 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS 330
           +KQ  + R      D SDDQQDI+RG+ MVD LFQ   G G THN VL+S EYLSQ   +
Sbjct: 14  KKQTDKDRWGGLVTDMSDDQQDISRGKGMVDSLFQAPQGTG-THNPVLNSYEYLSQGLRT 72

Query: 331 FN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           +N  N  DGFYI+PAF+DK+ +HI+KNFM LP I
Sbjct: 73  YNLDNNMDGFYIAPAFMDKLVVHISKNFMSLPNI 106

[42][TOP]
>UniRef100_Q9ZT00 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=3 Tax=Zea mays RepID=RCA_MAIZE
          Length = 433

 Score = 98.2 bits (243), Expect = 3e-19
 Identities = 51/103 (49%), Positives = 70/103 (67%), Gaps = 2/103 (1%)
 Frame = +1

Query: 124 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 303
           A  +V  + +    RW+ +    D SDDQQDITRG+ +VD+LFQ   G  GTH AVLSS 
Sbjct: 52  AAKEVDETKQTDEDRWKGL--AYDISDDQQDITRGKGLVDNLFQAPMG-DGTHVAVLSSY 108

Query: 304 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           +Y+SQ + S+N  N+ DGFYI+  F+DK+ +H++KNFM LP I
Sbjct: 109 DYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNI 151

[43][TOP]
>UniRef100_C6T859 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6T859_SOYBN
          Length = 443

 Score = 97.8 bits (242), Expect = 3e-19
 Identities = 62/135 (45%), Positives = 79/135 (58%), Gaps = 13/135 (9%)
 Frame = +1

Query: 61  SSAVSG---QRVGGARVATRSVRRAQLQVVASSRKQ---------MGRWRSIDAGVDASD 204
           SSA  G   ++V  +RV    V     ++VA   K+           RW+ +    D SD
Sbjct: 29  SSAFFGTSLKKVIASRVPNSKVSGGSFKIVAVEEKKEIEETQQTDKDRWKGL--AYDISD 86

Query: 205 DQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDK 381
           DQQDITRG+ +VD LFQ    AG TH AV+SS EYLS   R   +N  DGFYI+PAF+DK
Sbjct: 87  DQQDITRGKGLVDSLFQAPQDAG-THYAVMSSYEYLSTGLRQYLDNKMDGFYIAPAFMDK 145

Query: 382 MTIHIAKNFMDLPKI 426
           + +HI+KNFM LP I
Sbjct: 146 LVVHISKNFMTLPNI 160

[44][TOP]
>UniRef100_B7EAB2 cDNA clone:J013001C24, full insert sequence n=2 Tax=Oryza sativa
           Japonica Group RepID=B7EAB2_ORYSJ
          Length = 433

 Score = 97.8 bits (242), Expect = 3e-19
 Identities = 52/89 (58%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
 Frame = +1

Query: 166 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 339
           RW+ +    D SDDQQDITRG+  VD LFQ   G  GTH AVLSS EYLSQ   +  F+N
Sbjct: 61  RWKGL--AYDISDDQQDITRGKGFVDSLFQAPTG-DGTHEAVLSSYEYLSQGLRTYDFDN 117

Query: 340 IEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
              GFYI+PAF+DK+ +HI+KNFM LP I
Sbjct: 118 TMGGFYIAPAFMDKLVVHISKNFMTLPNI 146

[45][TOP]
>UniRef100_P93431 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=2 Tax=Oryza sativa RepID=RCA_ORYSJ
          Length = 466

 Score = 97.8 bits (242), Expect = 3e-19
 Identities = 52/89 (58%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
 Frame = +1

Query: 166 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 339
           RW+ +    D SDDQQDITRG+  VD LFQ   G  GTH AVLSS EYLSQ   +  F+N
Sbjct: 61  RWKGL--AYDISDDQQDITRGKGFVDSLFQAPTG-DGTHEAVLSSYEYLSQGLRTYDFDN 117

Query: 340 IEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
              GFYI+PAF+DK+ +HI+KNFM LP I
Sbjct: 118 TMGGFYIAPAFMDKLVVHISKNFMTLPNI 146

[46][TOP]
>UniRef100_Q06B50 Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase large protein isoform n=2 Tax=Acer rubrum
           RepID=Q06B50_ACERU
          Length = 474

 Score = 97.4 bits (241), Expect = 4e-19
 Identities = 58/132 (43%), Positives = 77/132 (58%), Gaps = 7/132 (5%)
 Frame = +1

Query: 52  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVA----SSRKQMGRWRSIDAGVDASDDQQ 213
           T+ +SA  G  +    +R     V     +VVA    + + +  +WR +    D SDDQQ
Sbjct: 27  TVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGL--AYDTSDDQQ 84

Query: 214 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTI 390
           DITRG+ +VD LFQ   G G TH AV+SS +Y+S   R    N  DGFYI+PAF+DK+ +
Sbjct: 85  DITRGKGLVDSLFQAPSGTG-THYAVMSSYDYISTGLRTYLENSMDGFYIAPAFMDKLVV 143

Query: 391 HIAKNFMDLPKI 426
           HI KNFM LP I
Sbjct: 144 HITKNFMSLPNI 155

[47][TOP]
>UniRef100_A7NYV5 Chromosome chr6 scaffold_3, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7NYV5_VITVI
          Length = 472

 Score = 97.4 bits (241), Expect = 4e-19
 Identities = 51/100 (51%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
 Frame = +1

Query: 133 QVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYL 312
           ++  + + +  RW+ +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS EYL
Sbjct: 59  EIDENEQTEKDRWKGL--AYDVSDDQQDITRGKGMVDSLFQAPMQSG-THYAVMSSYEYL 115

Query: 313 SQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           S     +N  N  DGFYI+PAF+DK+ +HI KNFM LP I
Sbjct: 116 STGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNI 155

[48][TOP]
>UniRef100_A5C3D4 Putative uncharacterized protein n=1 Tax=Vitis vinifera
           RepID=A5C3D4_VITVI
          Length = 472

 Score = 97.4 bits (241), Expect = 4e-19
 Identities = 51/100 (51%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
 Frame = +1

Query: 133 QVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYL 312
           ++  + + +  RW+ +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS EYL
Sbjct: 59  EIDENEQTEKDRWKGL--AYDVSDDQQDITRGKGMVDSLFQAPMQSG-THYAVMSSYEYL 115

Query: 313 SQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           S     +N  N  DGFYI+PAF+DK+ +HI KNFM LP I
Sbjct: 116 STGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNI 155

[49][TOP]
>UniRef100_Q7X9A2 Rubisco activase alpha form n=1 Tax=Deschampsia antarctica
           RepID=Q7X9A2_DESAN
          Length = 465

 Score = 96.7 bits (239), Expect = 7e-19
 Identities = 49/89 (55%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
 Frame = +1

Query: 166 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--RASFNN 339
           +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +  F+N
Sbjct: 61  KWKGL--AYDISDDQQDITRGKGIVDSLFQAPMG-DGTHEAVLSSYEYVSQGLKKYDFDN 117

Query: 340 IEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
              GFYI+PAF+DK+ +H++KNFM LP I
Sbjct: 118 TMGGFYIAPAFMDKLVVHLSKNFMTLPNI 146

[50][TOP]
>UniRef100_Q7X9A1 Rubisco activase beta form n=1 Tax=Deschampsia antarctica
           RepID=Q7X9A1_DESAN
          Length = 428

 Score = 96.7 bits (239), Expect = 7e-19
 Identities = 49/89 (55%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
 Frame = +1

Query: 166 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--RASFNN 339
           +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +  F+N
Sbjct: 61  KWKGL--AYDISDDQQDITRGKGIVDSLFQAPMG-DGTHEAVLSSYEYVSQGLKKYDFDN 117

Query: 340 IEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
              GFYI+PAF+DK+ +H++KNFM LP I
Sbjct: 118 TMGGFYIAPAFMDKLVVHLSKNFMTLPNI 146

[51][TOP]
>UniRef100_C6YBD7 Chloroplast ribulose-1,5-bisphosphate carboxylase activase
           (Fragment) n=1 Tax=Triticum aestivum RepID=C6YBD7_WHEAT
          Length = 360

 Score = 96.7 bits (239), Expect = 7e-19
 Identities = 49/94 (52%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
 Frame = +1

Query: 151 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 324
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +
Sbjct: 24  KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLKK 80

Query: 325 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
             F+N   GFYI+PAF+DK+ +H++KNFM LP I
Sbjct: 81  YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNI 114

[52][TOP]
>UniRef100_Q05C31 Putative uncharacterized protein n=1 Tax=Homo sapiens
           RepID=Q05C31_HUMAN
          Length = 427

 Score = 96.7 bits (239), Expect = 7e-19
 Identities = 49/94 (52%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
 Frame = +1

Query: 151 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 324
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +
Sbjct: 55  KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLKK 111

Query: 325 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
             F+N   GFYI+PAF+DK+ +H++KNFM LP I
Sbjct: 112 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNI 145

[53][TOP]
>UniRef100_Q40281 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Malus x domestica RepID=RCA_MALDO
          Length = 437

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 53/117 (45%), Positives = 73/117 (62%), Gaps = 6/117 (5%)
 Frame = +1

Query: 94  ARVATRSVRRAQLQVVAS----SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGG 261
           +R     V    L++VAS     +    RW+ +    D SDDQQDITRG+  VD LFQ  
Sbjct: 42  SRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGL--AFDTSDDQQDITRGKGKVDSLFQAP 99

Query: 262 FGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
            G+G TH A++SS EY+S    + +F+N  DG+YI+PAF+DK+ +HI KNFM LP +
Sbjct: 100 QGSG-THFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNM 155

[54][TOP]
>UniRef100_Q40073 Ribulose bisphosphate carboxylase/oxygenase activase A,
           chloroplastic n=2 Tax=Hordeum vulgare RepID=RCAA_HORVU
          Length = 464

 Score = 96.3 bits (238), Expect = 1e-18
 Identities = 49/94 (52%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
 Frame = +1

Query: 151 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 324
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G G TH AVLSS EY+SQ   +
Sbjct: 55  KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTGHG-THEAVLSSYEYVSQGLRK 111

Query: 325 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
             F+N   GFYI+PAF+DK+ +H++KNFM LP I
Sbjct: 112 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNI 145

[55][TOP]
>UniRef100_Q9AXG1 Ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 n=1
           Tax=Gossypium hirsutum RepID=Q9AXG1_GOSHI
          Length = 438

 Score = 95.9 bits (237), Expect = 1e-18
 Identities = 50/103 (48%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
 Frame = +1

Query: 124 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 303
           A  ++   ++    RW+ +    D SDDQQDITRG+ MVD LFQ      GTH AV+SS 
Sbjct: 59  AAKEIDEDTQTDQDRWKGL--AYDISDDQQDITRGKGMVDSLFQAPMN-DGTHYAVMSSY 115

Query: 304 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           EY+SQ   +++  N  DGFYI+PAF+DK+ +HI KN+M LP I
Sbjct: 116 EYISQGLRTYDLDNNMDGFYIAPAFMDKLVVHITKNYMTLPNI 158

[56][TOP]
>UniRef100_C1K241 Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase n=1 Tax=Solenostemon scutellarioides
           RepID=C1K241_SOLSC
          Length = 436

 Score = 95.5 bits (236), Expect = 2e-18
 Identities = 50/109 (45%), Positives = 73/109 (66%), Gaps = 5/109 (4%)
 Frame = +1

Query: 115 VRRAQLQVVASSRKQM--GRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNA 288
           V     +VVA ++K     RW  +    D SDDQQDI RG+ MVD LFQ   G G TH+A
Sbjct: 48  VSSGSFKVVAEAKKPSPGDRWGGLIE--DVSDDQQDIVRGKGMVDSLFQAPSGMG-THDA 104

Query: 289 VLSSQEYLSQSRASFNNIE---DGFYISPAFLDKMTIHIAKNFMDLPKI 426
           +++S EY+SQ + ++++++   DG YI+PAF+DK+ +H++KNFM LP I
Sbjct: 105 IMNSYEYISQGQKTYDHLDNTLDGLYIAPAFMDKLVVHLSKNFMTLPNI 153

[57][TOP]
>UniRef100_O82428 Rubisco activase n=1 Tax=Datisca glomerata RepID=O82428_DATGL
          Length = 373

 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 55/114 (48%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
 Frame = +1

Query: 94  ARVATRSVRRAQLQVVASS--RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFG 267
           +R+    +    ++ VA     KQ  + R      D SDDQQDITRG+ MVD LFQ    
Sbjct: 43  SRLTNPRIAAGNIKAVADDDEEKQTSKDRWGGLAFDTSDDQQDITRGKGMVDSLFQAPMQ 102

Query: 268 AGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
            G TH AV+SS EYLS   R   +N  DGFYI+PAF+DK+ +HI KNFM LP I
Sbjct: 103 TG-THYAVMSSYEYLSTGLRQYLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNI 155

[58][TOP]
>UniRef100_B9SDY7 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplast, putative n=1 Tax=Ricinus communis
           RepID=B9SDY7_RICCO
          Length = 473

 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 52/89 (58%), Positives = 60/89 (67%), Gaps = 2/89 (2%)
 Frame = +1

Query: 166 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 339
           RW  +    D SDDQQDITRG+ MVD LFQ    AG TH AV+SS EYLS     +N  N
Sbjct: 69  RWGGL--AYDMSDDQQDITRGKGMVDSLFQAPQDAG-THYAVMSSYEYLSTGLRQYNLDN 125

Query: 340 IEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
             DGFYI+PAF+DK+ +HI KNFM LP I
Sbjct: 126 NMDGFYIAPAFMDKLVVHITKNFMTLPNI 154

[59][TOP]
>UniRef100_A9TLG8 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TLG8_PHYPA
          Length = 410

 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 50/93 (53%), Positives = 66/93 (70%), Gaps = 2/93 (2%)
 Frame = +1

Query: 154 KQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASF 333
           K++ RW  +  G D SDDQQDI RG+ MVD LFQG  G G T    +SS +Y+S  + ++
Sbjct: 31  KKVDRWAGL--GNDISDDQQDIQRGKGMVDALFQGAVGLG-TQVVTMSSWDYVSTGQRTY 87

Query: 334 N--NIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           N  N++DG YI+PAF+DK+ IHIAKNFM+LP I
Sbjct: 88  NFDNMKDGLYIAPAFMDKLIIHIAKNFMNLPGI 120

[60][TOP]
>UniRef100_A7PIQ8 Chromosome chr13 scaffold_17, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7PIQ8_VITVI
          Length = 438

 Score = 95.1 bits (235), Expect = 2e-18
 Identities = 59/133 (44%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
 Frame = +1

Query: 52  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVASSRKQM----GRWRSIDAGVDASDDQQ 213
           ++ SSA  G  +    +R     V     +VVA     M     +W+ +    D SDDQQ
Sbjct: 27  SVPSSAFLGSSLKKVNSRFTHSKVSSGSFKVVAEVDDDMQTEKDKWKGL--AFDTSDDQQ 84

Query: 214 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMT 387
           DI RG+ MVD LFQ    AG TH AV+SS EY+S     +N  N  DGFYI+PAF+DK+ 
Sbjct: 85  DIVRGKGMVDSLFQAPMDAG-THYAVMSSYEYISTGLRQYNLDNNMDGFYIAPAFMDKLV 143

Query: 388 IHIAKNFMDLPKI 426
           +HI KNFM LP I
Sbjct: 144 VHITKNFMTLPNI 156

[61][TOP]
>UniRef100_A7PNR4 Chromosome chr8 scaffold_23, whole genome shotgun sequence n=2
           Tax=Vitis vinifera RepID=A7PNR4_VITVI
          Length = 474

 Score = 94.7 bits (234), Expect = 3e-18
 Identities = 57/131 (43%), Positives = 76/131 (58%), Gaps = 6/131 (4%)
 Frame = +1

Query: 52  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVAS--SRKQMGRWRSIDAGVDASDDQQDI 219
           ++ SSA  G  +    +++A         +VVA     KQ  + +      D SDDQQDI
Sbjct: 26  SVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEVDEEKQTSKDKWKGLAFDESDDQQDI 85

Query: 220 TRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIH 393
           TRG+ MVD LFQ    +G TH AV+SS +Y+S     +N  N  DGFYI+PAF+DK+ +H
Sbjct: 86  TRGKGMVDSLFQAPMDSG-THYAVMSSYDYISTGLRQYNLDNTMDGFYIAPAFMDKLVVH 144

Query: 394 IAKNFMDLPKI 426
           I KNFM LP I
Sbjct: 145 ITKNFMTLPNI 155

[62][TOP]
>UniRef100_Q7X999 Ribulose bisphosphate carboxylase/oxygenase activase 2,
           chloroplastic n=1 Tax=Larrea tridentata RepID=RCA2_LARTR
          Length = 435

 Score = 94.4 bits (233), Expect = 4e-18
 Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
 Frame = +1

Query: 166 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 339
           +W+ +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS +Y+SQ    +N  N
Sbjct: 70  KWKGL--AYDISDDQQDITRGKGMVDTLFQAPMQSG-THYAVMSSYDYISQGLRQYNLDN 126

Query: 340 IEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
             DGFYI+PAF+DK+ +HI KNF+ LP I
Sbjct: 127 NMDGFYIAPAFMDKLVVHITKNFLSLPNI 155

[63][TOP]
>UniRef100_Q7X9A0 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic n=1 Tax=Larrea tridentata RepID=RCA1_LARTR
          Length = 476

 Score = 94.4 bits (233), Expect = 4e-18
 Identities = 48/89 (53%), Positives = 62/89 (69%), Gaps = 2/89 (2%)
 Frame = +1

Query: 166 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 339
           +W+ +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS +Y+SQ    +N  N
Sbjct: 70  KWKGL--AYDISDDQQDITRGKGMVDTLFQAPMQSG-THYAVMSSYDYISQGLRQYNLDN 126

Query: 340 IEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
             DGFYI+PAF+DK+ +HI KNF+ LP I
Sbjct: 127 NMDGFYIAPAFMDKLVVHITKNFLSLPNI 155

[64][TOP]
>UniRef100_B9IFW9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IFW9_POPTR
          Length = 476

 Score = 94.0 bits (232), Expect = 5e-18
 Identities = 51/121 (42%), Positives = 74/121 (61%), Gaps = 2/121 (1%)
 Frame = +1

Query: 70  VSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDL 249
           V G ++   R+ TR+++ A  +     +    +W+ +    D SDDQQDITRG+ MVD L
Sbjct: 40  VLGSKITNQRLLTRNLKLAA-EYDKEKQPSKDKWKGL--AFDTSDDQQDITRGKGMVDSL 96

Query: 250 FQGGFGAGGTHNAVLSSQEYLSQSRASF--NNIEDGFYISPAFLDKMTIHIAKNFMDLPK 423
           FQ   G G TH AV+SS +Y S+    +  +N  DGFYI+ +F+DK+ +HI KNF+ LP 
Sbjct: 97  FQAPMGTG-THYAVMSSYDYTSKGLRQYKLDNNMDGFYIASSFMDKLVVHITKNFLQLPN 155

Query: 424 I 426
           I
Sbjct: 156 I 156

[65][TOP]
>UniRef100_Q06B48 Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase large protein isoform n=2 Tax=Acer rubrum
           RepID=Q06B48_ACERU
          Length = 474

 Score = 93.2 bits (230), Expect = 8e-18
 Identities = 56/132 (42%), Positives = 75/132 (56%), Gaps = 7/132 (5%)
 Frame = +1

Query: 52  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVA----SSRKQMGRWRSIDAGVDASDDQQ 213
           T+ +SA  G  +    +R     V     +VVA    + + +  +WR +    D SDDQQ
Sbjct: 27  TVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGL--AYDTSDDQQ 84

Query: 214 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTI 390
           DITRG+ +VD LFQ   G  GTH AV+SS +Y+S   R    N  DGFYI+P F+ K+ +
Sbjct: 85  DITRGKGLVDSLFQAPSGT-GTHYAVMSSYDYISTGLRTYLENSMDGFYIAPVFMGKLVV 143

Query: 391 HIAKNFMDLPKI 426
           HI KNFM LP I
Sbjct: 144 HITKNFMSLPNI 155

[66][TOP]
>UniRef100_O49074 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Solanum pennellii RepID=RCA_SOLPN
          Length = 459

 Score = 93.2 bits (230), Expect = 8e-18
 Identities = 52/120 (43%), Positives = 77/120 (64%), Gaps = 4/120 (3%)
 Frame = +1

Query: 79  QRVGGARVATRSVRRAQLQVVASS--RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLF 252
           ++V    V++  V    L+VVA      +  RW+ +    + SDDQQDI RG+ +VD LF
Sbjct: 38  KKVYAKGVSSPKVSNRNLRVVAQEVDETKEDRWKGLYD--NTSDDQQDIARGKGLVDSLF 95

Query: 253 QGGFGAGGTHNAVLSSQEYLSQSRASF--NNIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           Q   G G TH+A+++S EY+SQ+  ++  +N  DGFYI+PAF+DK+ +HI KNF+ LP I
Sbjct: 96  QAPTGTG-THHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNI 154

[67][TOP]
>UniRef100_Q9M431 Rubisco activase (Fragment) n=1 Tax=Pinus halepensis
           RepID=Q9M431_PINHA
          Length = 226

 Score = 91.7 bits (226), Expect = 2e-17
 Identities = 44/77 (57%), Positives = 59/77 (76%), Gaps = 2/77 (2%)
 Frame = +1

Query: 202 DDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLS--QSRASFNNIEDGFYISPAFL 375
           DDQQDI RG+  VD LFQ   G+G THNA++SS +Y+S  Q   S +N+ DG+YI+PAF+
Sbjct: 1   DDQQDIRRGKGKVDSLFQAPMGSG-THNAIMSSYDYISTAQRTYSLDNMMDGYYIAPAFM 59

Query: 376 DKMTIHIAKNFMDLPKI 426
           DK+ +HI+KNFM+LP I
Sbjct: 60  DKLVVHISKNFMNLPNI 76

[68][TOP]
>UniRef100_A9NZT0 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=A9NZT0_PICSI
          Length = 363

 Score = 90.5 bits (223), Expect = 5e-17
 Identities = 43/89 (48%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
 Frame = +1

Query: 166 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 339
           +W+ +    D SDDQ DI RG+  VD LFQ   G+G THN V+S+ +Y+S ++ +  F+N
Sbjct: 73  KWKGL--AFDESDDQMDIRRGKGKVDSLFQAPMGSG-THNVVMSTYDYISTAQRTYDFDN 129

Query: 340 IEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
             DG+YI+P+F+DK+ +HI+KNFM+LP I
Sbjct: 130 TMDGYYIAPSFMDKLLVHISKNFMNLPNI 158

[69][TOP]
>UniRef100_A9NV87 Putative uncharacterized protein n=2 Tax=Picea sitchensis
           RepID=A9NV87_PICSI
          Length = 480

 Score = 90.5 bits (223), Expect = 5e-17
 Identities = 43/89 (48%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
 Frame = +1

Query: 166 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 339
           +W+ +    D SDDQ DI RG+  VD LFQ   G+G THN V+S+ +Y+S ++ +  F+N
Sbjct: 73  KWKGL--AFDESDDQMDIRRGKGKVDSLFQAPMGSG-THNVVMSTYDYISTAQRTYDFDN 129

Query: 340 IEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
             DG+YI+P+F+DK+ +HI+KNFM+LP I
Sbjct: 130 TMDGYYIAPSFMDKLLVHISKNFMNLPNI 158

[70][TOP]
>UniRef100_Q8L5T3 Rubisco activase n=1 Tax=Chenopodium quinoa RepID=Q8L5T3_CHEQI
          Length = 438

 Score = 81.6 bits (200), Expect = 2e-14
 Identities = 47/113 (41%), Positives = 67/113 (59%), Gaps = 2/113 (1%)
 Frame = +1

Query: 94  ARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAG 273
           +R ++ +V+ A  +   S +    RW  +    D SDDQ DI RG+ MVD LFQ    +G
Sbjct: 49  SRASSMTVKAADYE--ESKQSNTDRWAHL--ATDISDDQLDIRRGKGMVDSLFQAPMDSG 104

Query: 274 GTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
            TH  V SS EY SQ    +N  N+   FYI+P+F+DK+ +HI KN+++LP I
Sbjct: 105 -THVPVQSSLEYESQGLRKYNIDNMLGNFYIAPSFMDKIVVHITKNYLNLPNI 156

[71][TOP]
>UniRef100_C0PQ99 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=C0PQ99_PICSI
          Length = 368

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 37/73 (50%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
 Frame = +1

Query: 214 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNNIEDGFYISPAFLDKMT 387
           DI RG+  VD LFQ   G+G THN V+S+ +Y+S ++ +  F+N  DG+YI+P+F+DK+ 
Sbjct: 2   DIRRGKGKVDSLFQAPMGSG-THNVVMSTYDYISTAQRTYDFDNTMDGYYIAPSFMDKLL 60

Query: 388 IHIAKNFMDLPKI 426
           +HI+KNFM+LP I
Sbjct: 61  VHISKNFMNLPNI 73

[72][TOP]
>UniRef100_P10871 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=2 Tax=Spinacia oleracea RepID=RCA_SPIOL
          Length = 472

 Score = 79.3 bits (194), Expect = 1e-13
 Identities = 46/107 (42%), Positives = 62/107 (57%), Gaps = 2/107 (1%)
 Frame = +1

Query: 112 SVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAV 291
           S R   + V A+  ++    +      D SDDQ DI RG+ MVD LFQ    AG TH  +
Sbjct: 48  SSRTTSMTVKAAENEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAG-THVPI 106

Query: 292 LSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
            SS EY SQ    ++  N+   FYI+PAF+DK+ +HI KNF++LP I
Sbjct: 107 QSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNI 153

[73][TOP]
>UniRef100_Q9ATC1 Rubisco activase (Fragment) n=1 Tax=Zantedeschia aethiopica
           RepID=Q9ATC1_ZANAE
          Length = 334

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 31/52 (59%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
 Frame = +1

Query: 277 THNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           THN VLSS EY+S    SFN  N  +G YI+PAF+DK+ +HI KNFM+LP I
Sbjct: 1   THNPVLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLPNI 52

[74][TOP]
>UniRef100_A6H5A0 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H5A0_VIGUN
          Length = 236

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 20/33 (60%), Positives = 29/33 (87%)
 Frame = +1

Query: 328 SFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           +F+N++DG+YI+PAF+DK+ +HI KNFM LP I
Sbjct: 11  NFDNMKDGYYIAPAFMDKLVVHITKNFMTLPNI 43

[75][TOP]
>UniRef100_A6H599 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H599_VIGUN
          Length = 214

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 20/33 (60%), Positives = 29/33 (87%)
 Frame = +1

Query: 328 SFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           +F+N++DG+YI+PAF+DK+ +HI KNFM LP I
Sbjct: 22  NFDNMKDGYYIAPAFMDKLVVHITKNFMTLPNI 54

[76][TOP]
>UniRef100_A6H596 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H596_VIGUN
          Length = 251

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 20/33 (60%), Positives = 29/33 (87%)
 Frame = +1

Query: 328 SFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKI 426
           +F+N++DG+YI+PAF+DK+ +HI KNFM LP I
Sbjct: 11  NFDNMKDGYYIAPAFMDKLVVHITKNFMTLPNI 43