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[1][TOP]
>UniRef100_A8J8B2 Plastid-specific ribosomal protein 1 n=1 Tax=Chlamydomonas
reinhardtii RepID=A8J8B2_CHLRE
Length = 286
Score = 290 bits (743), Expect = 3e-77
Identities = 151/151 (100%), Positives = 151/151 (100%)
Frame = +1
Query: 67 MALTLHQQRMAQIACRQQASGRVSVRPVLQLASTRVPVPYGPNMAVVATRPARSGLVVRA 246
MALTLHQQRMAQIACRQQASGRVSVRPVLQLASTRVPVPYGPNMAVVATRPARSGLVVRA
Sbjct: 1 MALTLHQQRMAQIACRQQASGRVSVRPVLQLASTRVPVPYGPNMAVVATRPARSGLVVRA 60
Query: 247 QSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGT 426
QSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGT
Sbjct: 61 QSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGT 120
Query: 427 HGKKEQKVEVTIYTLRNGVVRVEDAENNLYA 519
HGKKEQKVEVTIYTLRNGVVRVEDAENNLYA
Sbjct: 121 HGKKEQKVEVTIYTLRNGVVRVEDAENNLYA 151
[2][TOP]
>UniRef100_Q5MCR1 Chloroplast-specific ribosome-associated protein n=1 Tax=Volvox
carteri f. nagariensis RepID=Q5MCR1_VOLCA
Length = 232
Score = 176 bits (446), Expect = 9e-43
Identities = 105/158 (66%), Positives = 119/158 (75%), Gaps = 7/158 (4%)
Frame = +1
Query: 67 MALTLHQQRMAQIACRQQA---SGRVSVRPVLQLASTRVPVPY----GPNMAVVATRPAR 225
MAL L QQ++A C+++A G V RP + ASTR P + G V A RP+R
Sbjct: 1 MALLL-QQQVAHGLCKKRAVGPCGAVLHRPCVTPASTRPPSTFQSVEGLAPVVGAGRPSR 59
Query: 226 SGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSA 405
SG VV A A A TVRIIIQGRKLPVT+AIK YVEEKVAKA+ NF+HTLKEVDVTLSA
Sbjct: 60 SGFVVHA--AAKTASTVRIIIQGRKLPVTNAIKEYVEEKVAKAIQNFAHTLKEVDVTLSA 117
Query: 406 RGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYA 519
RGGDTGTHGKKEQKV+VTI+TLRNGVVRVED E+NLYA
Sbjct: 118 RGGDTGTHGKKEQKVDVTIFTLRNGVVRVEDRESNLYA 155
[3][TOP]
>UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TA00_PHYPA
Length = 297
Score = 89.7 bits (221), Expect = 1e-16
Identities = 49/96 (51%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Frame = +1
Query: 241 RAQSAKAAAGT---VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARG 411
R + A GT VR++IQG+ L +TDAIK YVEEKV AV N S +KEVDV +S RG
Sbjct: 74 RVTTCMAWGGTLAGVRLVIQGKHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRG 133
Query: 412 GDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYA 519
G+TG G++ Q+ EVT++T ++GVVR E+ ++YA
Sbjct: 134 GETG-RGERLQRCEVTLFTKKHGVVRAEEEAESMYA 168
[4][TOP]
>UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWK9_PHYPA
Length = 221
Score = 89.4 bits (220), Expect = 1e-16
Identities = 47/86 (54%), Positives = 62/86 (72%)
Frame = +1
Query: 262 AAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKE 441
A VR++IQG+ L +TDAIK YVEEKV AV N S +KEVDV +S RGG+TG G K
Sbjct: 6 ALAGVRLVIQGKHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRGGETG-RGGKL 64
Query: 442 QKVEVTIYTLRNGVVRVEDAENNLYA 519
Q+ EVT++T ++GVVR E+ ++YA
Sbjct: 65 QRCEVTLFTKKHGVVRAEEEAESMYA 90
[5][TOP]
>UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea
RepID=RR30_SPIOL
Length = 302
Score = 89.4 bits (220), Expect = 1e-16
Identities = 48/111 (43%), Positives = 75/111 (67%)
Frame = +1
Query: 187 GPNMAVVATRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANF 366
G N+AV + + +R+ V S +V++I+QGR L V+D ++ +VE+KV K+VA
Sbjct: 46 GLNVAVKSVQISRNKPNVVCMSWDGPLSSVKLILQGRNLEVSDNVRSHVEDKVGKSVAKH 105
Query: 367 SHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYA 519
SH ++EVDV LSARGGD + G K ++ EVT++T R+GV+R E+ +LY+
Sbjct: 106 SHLVREVDVRLSARGGDL-SKGPKLRRCEVTLFTKRHGVIRAEEDAESLYS 155
[6][TOP]
>UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO
Length = 284
Score = 85.1 bits (209), Expect = 3e-15
Identities = 53/104 (50%), Positives = 72/104 (69%), Gaps = 2/104 (1%)
Frame = +1
Query: 214 RPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANF-SHTLKEVD 390
R A S VV S +A+A T ++I+QGR L +TD+I+ Y EEK+ KAVA+F H ++EVD
Sbjct: 63 RAAGSNRVV--VSVEASAST-KVIVQGRHLEITDSIREYAEEKINKAVAHFDQHDVREVD 119
Query: 391 VTLSARGG-DTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYA 519
V S+RGG D T G QK EVT+YT RNG++R E+ ++LYA
Sbjct: 120 VRCSSRGGADKKTPGGALQKTEVTVYT-RNGIIRSEEEADDLYA 162
[7][TOP]
>UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR
Length = 306
Score = 84.7 bits (208), Expect = 3e-15
Identities = 50/116 (43%), Positives = 73/116 (62%), Gaps = 5/116 (4%)
Frame = +1
Query: 187 GPNMAVVAT-RPARSGLVVRAQSAKAA----AGTVRIIIQGRKLPVTDAIKLYVEEKVAK 351
G NM+ + R AR+ L S K + +V++IIQG+ L +TD +K +VE+KV K
Sbjct: 52 GKNMSFIELGRTARTPLTHGGCSVKMSWDGPLHSVKLIIQGKNLELTDTVKRHVEDKVGK 111
Query: 352 AVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYA 519
AV SH ++EVDV LS RGG+ G G + ++ EVT++T R+GVVR E+ +YA
Sbjct: 112 AVQKHSHLVREVDVRLSVRGGELG-KGPRIRRCEVTLFTNRHGVVRAEEDAETIYA 166
[8][TOP]
>UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9SEK8_RICCO
Length = 311
Score = 83.6 bits (205), Expect = 8e-15
Identities = 45/115 (39%), Positives = 69/115 (60%)
Frame = +1
Query: 175 PVPYGPNMAVVATRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKA 354
P+ G N+ + R V S + +V++I QG+ L +TD +K +VE+KV KA
Sbjct: 57 PLKLGSNVKYFENKRGRRSAV--RMSWEGPLSSVKLITQGKNLELTDTVKKHVEDKVGKA 114
Query: 355 VANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYA 519
V SH ++EVDV LS RGG+ G G K ++ EVT++T ++GV+R E+ +YA
Sbjct: 115 VQKHSHLVREVDVRLSVRGGEFG-KGPKIRRCEVTLFTKKHGVIRAEEDAETIYA 168
[9][TOP]
>UniRef100_C6TFU4 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TFU4_SOYBN
Length = 208
Score = 82.8 bits (203), Expect = 1e-14
Identities = 40/82 (48%), Positives = 58/82 (70%)
Frame = +1
Query: 271 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 450
+V++IIQG+ L +TDA+K +VE+KV KAV SH ++EVDV LS RGG G + ++
Sbjct: 69 SVKLIIQGKNLELTDAVKRHVEDKVGKAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRC 128
Query: 451 EVTIYTLRNGVVRVEDAENNLY 516
EVT++T R+GVVR E+ + Y
Sbjct: 129 EVTLFTKRHGVVRAEEDAESTY 150
[10][TOP]
>UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984F94
Length = 298
Score = 82.0 bits (201), Expect = 2e-14
Identities = 46/103 (44%), Positives = 65/103 (63%)
Frame = +1
Query: 208 ATRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEV 387
AT L VR S +V++I+QG+ L +TD ++ +VEEKV KAV SH ++EV
Sbjct: 57 ATTRQTKPLAVR-MSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREV 115
Query: 388 DVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLY 516
DV LS RGG+ G G K ++ EVT++T ++GVVR E+ LY
Sbjct: 116 DVRLSIRGGELG-KGPKIRRCEVTLFTKKHGVVRAEEHAETLY 157
[11][TOP]
>UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QEV5_VITVI
Length = 230
Score = 81.6 bits (200), Expect = 3e-14
Identities = 40/82 (48%), Positives = 59/82 (71%)
Frame = +1
Query: 271 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 450
+V++I+QG+ L +TD ++ +VEEKV KAV SH ++EVDV LS RGG+ G G K ++
Sbjct: 9 SVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGGELG-KGPKIRRC 67
Query: 451 EVTIYTLRNGVVRVEDAENNLY 516
EVT++T ++GVVR E+ LY
Sbjct: 68 EVTLFTKKHGVVRAEEHAETLY 89
[12][TOP]
>UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LMC5_PICSI
Length = 321
Score = 81.3 bits (199), Expect = 4e-14
Identities = 40/83 (48%), Positives = 59/83 (71%)
Frame = +1
Query: 271 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 450
+VR+IIQG+ +TDA+K Y+EEKV AV ++ ++EVDV LS RGG+ G G K ++
Sbjct: 87 SVRLIIQGKNFQLTDAVKAYIEEKVGIAVQKHANLVREVDVRLSIRGGEVG-KGPKIRRC 145
Query: 451 EVTIYTLRNGVVRVEDAENNLYA 519
EVT++T ++GVVR E+ +YA
Sbjct: 146 EVTLFTKKHGVVRAEEEAETIYA 168
[13][TOP]
>UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T7E3_SOYBN
Length = 291
Score = 80.9 bits (198), Expect = 5e-14
Identities = 39/82 (47%), Positives = 57/82 (69%)
Frame = +1
Query: 271 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 450
+V++ IQG+ L +TDA+K +VE+KV KAV SH ++EVDV LS RGG G + ++
Sbjct: 69 SVKLTIQGKNLELTDAVKQHVEDKVGKAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRC 128
Query: 451 EVTIYTLRNGVVRVEDAENNLY 516
EVT++T R+GVVR E+ + Y
Sbjct: 129 EVTLFTKRHGVVRAEEDAESTY 150
[14][TOP]
>UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis
thaliana RepID=Q9FLV3_ARATH
Length = 365
Score = 80.5 bits (197), Expect = 6e-14
Identities = 44/99 (44%), Positives = 66/99 (66%)
Frame = +1
Query: 223 RSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLS 402
RS L V+ S +V++IIQG+ L +++ IK +VEEKV K+V SH ++EVDV LS
Sbjct: 123 RSSLAVK-MSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLS 181
Query: 403 ARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYA 519
RGG+ G G + ++ EVT++T ++GVVR E+ +YA
Sbjct: 182 VRGGEFG-KGPRIRRCEVTLFTKKHGVVRAEEDAETVYA 219
[15][TOP]
>UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum
RepID=C9EFD1_SOLTU
Length = 280
Score = 80.5 bits (197), Expect = 6e-14
Identities = 39/82 (47%), Positives = 59/82 (71%)
Frame = +1
Query: 271 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 450
+V++I+QG+ L +T A+K YVEEK+ KAV SH +EVDV LS RGG+ G G K ++
Sbjct: 56 SVKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGGELG-KGPKIRRC 114
Query: 451 EVTIYTLRNGVVRVEDAENNLY 516
EVT++T ++GV+R E+ ++Y
Sbjct: 115 EVTLFTKKHGVIRAEEDAESIY 136
[16][TOP]
>UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum
RepID=Q672Q2_SOLLC
Length = 311
Score = 80.1 bits (196), Expect = 8e-14
Identities = 39/82 (47%), Positives = 59/82 (71%)
Frame = +1
Query: 271 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 450
+V++I+QG+ L +T A+K YVEEK+ KAV SH +EVDV LS RGG+ G G K ++
Sbjct: 84 SVKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGGELG-KGPKIRRC 142
Query: 451 EVTIYTLRNGVVRVEDAENNLY 516
EVT++T ++GV+R E+ ++Y
Sbjct: 143 EVTLFTKKHGVIRAEEDGESIY 164
[17][TOP]
>UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays
RepID=B6TYP8_MAIZE
Length = 309
Score = 79.0 bits (193), Expect = 2e-13
Identities = 43/108 (39%), Positives = 69/108 (63%)
Frame = +1
Query: 196 MAVVATRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHT 375
+AV ATR R + VR + +VR+I+Q R +++ +K ++E+KV +AV+ H
Sbjct: 47 VAVDATRRRRVSVSVR-MAWDGPLSSVRLIMQSRNAKLSEKLKEHIEDKVGRAVSKHCHL 105
Query: 376 LKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYA 519
++EVDV LSARGG+ G G K + E+T++T R+GV+R E+ + YA
Sbjct: 106 VREVDVRLSARGGELG-RGPKTSRCEITLFTKRHGVLRAEEDAESTYA 152
[18][TOP]
>UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ
Length = 309
Score = 78.6 bits (192), Expect = 2e-13
Identities = 42/106 (39%), Positives = 65/106 (61%)
Frame = +1
Query: 202 VVATRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLK 381
++A RS V S +VR+I+QGR + + + +K ++EEK +AVA S +K
Sbjct: 57 LLAAESRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVK 116
Query: 382 EVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYA 519
EVDV LSARGG+ + G K + E+T++T R+GV+R E+ + YA
Sbjct: 117 EVDVRLSARGGEL-SRGPKICRCEITLFTKRHGVIRAEEDAESTYA 161
[19][TOP]
>UniRef100_Q10AC8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative,
expressed n=1 Tax=Oryza sativa Japonica Group
RepID=Q10AC8_ORYSJ
Length = 241
Score = 78.6 bits (192), Expect = 2e-13
Identities = 42/106 (39%), Positives = 65/106 (61%)
Frame = +1
Query: 202 VVATRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLK 381
++A RS V S +VR+I+QGR + + + +K ++EEK +AVA S +K
Sbjct: 57 LLAAESRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVK 116
Query: 382 EVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYA 519
EVDV LSARGG+ + G K + E+T++T R+GV+R E+ + YA
Sbjct: 117 EVDVRLSARGGEL-SRGPKICRCEITLFTKRHGVIRAEEDAESTYA 161
[20][TOP]
>UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group
RepID=C6YXL0_ORYSJ
Length = 321
Score = 78.6 bits (192), Expect = 2e-13
Identities = 42/106 (39%), Positives = 65/106 (61%)
Frame = +1
Query: 202 VVATRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLK 381
++A RS V S +VR+I+QGR + + + +K ++EEK +AVA S +K
Sbjct: 57 LLAAESRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVK 116
Query: 382 EVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYA 519
EVDV LSARGG+ + G K + E+T++T R+GV+R E+ + YA
Sbjct: 117 EVDVRLSARGGEL-SRGPKICRCEITLFTKRHGVIRAEEDAESTYA 161
[21][TOP]
>UniRef100_A9PJW3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJW3_9ROSI
Length = 268
Score = 78.6 bits (192), Expect = 2e-13
Identities = 39/83 (46%), Positives = 59/83 (71%)
Frame = +1
Query: 271 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 450
+V++IIQG+ L ++D +K +VE+KV KAV SH ++ VDV LS RGG+ G G + ++
Sbjct: 84 SVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGGELG-KGPRIRRC 142
Query: 451 EVTIYTLRNGVVRVEDAENNLYA 519
EVT++T R+GVVR E+ +YA
Sbjct: 143 EVTLFTKRHGVVRAEEDAETIYA 165
[22][TOP]
>UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum
bicolor RepID=C5WRX8_SORBI
Length = 310
Score = 77.8 bits (190), Expect = 4e-13
Identities = 36/83 (43%), Positives = 60/83 (72%)
Frame = +1
Query: 271 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 450
+VR+I+QGR + ++D +K ++E+KV +AV+ H ++EVDV LSARGG+ G G K +
Sbjct: 71 SVRLIMQGRNVKLSDKLKEHIEDKVGRAVSKHCHLVREVDVRLSARGGELG-RGPKTSRC 129
Query: 451 EVTIYTLRNGVVRVEDAENNLYA 519
E+T+++ R+GV+R E+ + YA
Sbjct: 130 EITLFSKRHGVLRAEEDAESTYA 152
[23][TOP]
>UniRef100_C1N7A9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N7A9_9CHLO
Length = 245
Score = 76.6 bits (187), Expect = 9e-13
Identities = 47/98 (47%), Positives = 64/98 (65%), Gaps = 4/98 (4%)
Frame = +1
Query: 238 VRAQSAKAAAGTVR---IIIQGRKLPVTDAIKLYVEEKVAKAVANFS-HTLKEVDVTLSA 405
VRA A+A A + +I+QGR L +T+AI+ Y E+K+ KAV++F H ++EVDVT SA
Sbjct: 31 VRASGARAMAAPAKGTKVIVQGRHLEITEAIRDYCEQKINKAVSHFDMHDVREVDVTCSA 90
Query: 406 RGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYA 519
R G Q +VT+YT RNGVVR E+ +NLYA
Sbjct: 91 R--SEKQQGGDLQMTQVTVYT-RNGVVRSEEEADNLYA 125
[24][TOP]
>UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR
Length = 231
Score = 76.6 bits (187), Expect = 9e-13
Identities = 38/83 (45%), Positives = 59/83 (71%)
Frame = +1
Query: 271 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 450
+V++IIQG+ L ++D +K +VE+KV KAV SH ++ VDV LS RGG+ G G + ++
Sbjct: 9 SVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGGELG-KGPRIRRC 67
Query: 451 EVTIYTLRNGVVRVEDAENNLYA 519
EVT++T R+GVVR E+ ++A
Sbjct: 68 EVTLFTKRHGVVRAEEDAETIHA 90
[25][TOP]
>UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PHY3_POPTR
Length = 306
Score = 76.6 bits (187), Expect = 9e-13
Identities = 38/83 (45%), Positives = 59/83 (71%)
Frame = +1
Query: 271 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 450
+V++IIQG+ L ++D +K +VE+KV KAV SH ++ VDV LS RGG+ G G + ++
Sbjct: 84 SVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGGELG-KGPRIRRC 142
Query: 451 EVTIYTLRNGVVRVEDAENNLYA 519
EVT++T R+GVVR E+ ++A
Sbjct: 143 EVTLFTKRHGVVRAEEDAETIHA 165
[26][TOP]
>UniRef100_Q00W70 Chloroplast-specific ribosomal protein (ISS) n=1 Tax=Ostreococcus
tauri RepID=Q00W70_OSTTA
Length = 184
Score = 63.2 bits (152), Expect = 1e-08
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Frame = +1
Query: 241 RAQSAKAAAGT-VRIIIQGRKLPVTDAIKLYVEEKVAKAVANF-SHTLKEVDVTLSARGG 414
RA KA+ T V++++QG L +T AI YV K+ +A ++ S ++EVDV SARGG
Sbjct: 38 RAVQTKASTNTDVKMLVQGLHLEITPAIDEYVRSKIGRACSHVDSRDIREVDVRCSARGG 97
Query: 415 DTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYA 519
+ G+ G E K EVT+ R + + NLYA
Sbjct: 98 E-GSKGGVEHKTEVTVLMTRGPTLHADGVGENLYA 131
[27][TOP]
>UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB
Length = 190
Score = 62.4 bits (150), Expect = 2e-08
Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +1
Query: 277 RIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEV 456
+++IQG+ + +TDAI+ YV+EK+ +AV++F+ EVDV LS Q EV
Sbjct: 3 KLVIQGKNVEITDAIRSYVQEKIERAVSHFAQITSEVDVNLSVA---RNPRISASQSAEV 59
Query: 457 TIYTLRNG-VVRVEDAENNLYA 519
T+Y NG V+R E++ NLYA
Sbjct: 60 TVYA--NGTVIRAEESSENLYA 79
[28][TOP]
>UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA
Length = 212
Score = 62.0 bits (149), Expect = 2e-08
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 453
++++IQG+ L +TDAI YV++K+AKAV++F EVDV LS Q E
Sbjct: 1 MKLVIQGKNLEITDAIHEYVQQKIAKAVSHFQQLTNEVDVHLSVA---RNPRINPRQTAE 57
Query: 454 VTIYTLRNG-VVRVEDAENNLYA 519
VTIY NG V+R +++ NLYA
Sbjct: 58 VTIYA--NGTVIRAQESSENLYA 78
[29][TOP]
>UniRef100_B0A7Y1 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM
16795 RepID=B0A7Y1_9CLOT
Length = 187
Score = 62.0 bits (149), Expect = 2e-08
Identities = 35/82 (42%), Positives = 53/82 (64%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 453
++I+I G+K+ +TD IK VE+K++K + + H EV VT+SAR K +QK+E
Sbjct: 7 MKILITGKKIELTDGIKGAVEDKLSK-LDRYLHEDTEVKVTVSAR--------KAKQKIE 57
Query: 454 VTIYTLRNGVVRVEDAENNLYA 519
VTI + ++R ED+E NLYA
Sbjct: 58 VTIIPINGPIIRAEDSEENLYA 79
[30][TOP]
>UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-3-3Ab RepID=Q2JS19_SYNJA
Length = 191
Score = 61.6 bits (148), Expect = 3e-08
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +1
Query: 277 RIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEV 456
+++IQG+ + +TDAI+ YV+EK+ +AV +F+ EVDV LS Q EV
Sbjct: 3 KLVIQGKNVEITDAIRSYVQEKIERAVKHFAQITSEVDVNLSVA---RNPRISANQSAEV 59
Query: 457 TIYTLRNG-VVRVEDAENNLYA 519
T+Y NG V+R E++ NLYA
Sbjct: 60 TVYA--NGTVIRAEESSENLYA 79
[31][TOP]
>UniRef100_UPI00017F5F53 putative RNA-binding protein n=1 Tax=Clostridium difficile
QCD-23m63 RepID=UPI00017F5F53
Length = 183
Score = 60.5 bits (145), Expect = 7e-08
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 453
+ III G+++ +TDAIK +E K++K + N+ H +V VT+SAR K QK+E
Sbjct: 1 MNIIISGKQIELTDAIKNKIESKLSK-LDNYIHPDTDVKVTVSAR--------KARQKIE 51
Query: 454 VTIYTLRNGVVRVEDAENNLY 516
VTI T+ ++R ED + NLY
Sbjct: 52 VTIATVNGPIIRAEDMQENLY 72
[32][TOP]
>UniRef100_C9XIR4 Putative RNA-binding protein n=3 Tax=Clostridium difficile
RepID=C9XIR4_CLODI
Length = 183
Score = 60.1 bits (144), Expect = 9e-08
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 453
+ III G+++ +TDAIK +E K++K + N+ H +V VT+SAR K QK+E
Sbjct: 1 MNIIISGKQIELTDAIKNKIETKLSK-LDNYIHPDTDVKVTVSAR--------KARQKIE 51
Query: 454 VTIYTLRNGVVRVEDAENNLY 516
VTI T+ ++R ED + NLY
Sbjct: 52 VTIATVNGPIIRAEDMQENLY 72
[33][TOP]
>UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YSA5_ANASP
Length = 213
Score = 60.1 bits (144), Expect = 9e-08
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKV 450
++++I G+ + +TDAI+ YV +K+ KAV +F + EVDV LS AR T Q
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAVNHFQNITNEVDVHLSVARNPRINT----RQAA 56
Query: 451 EVTIYTLRNGVVRVEDAENNLYA 519
EVTIY V+R E++ NLYA
Sbjct: 57 EVTIYA-NGSVIRAEESSENLYA 78
[34][TOP]
>UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT
Length = 213
Score = 60.1 bits (144), Expect = 9e-08
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKV 450
++++I G+ + +TDAI+ YV +K+ KAV +F + EVDV LS AR T Q
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAVNHFQNITNEVDVHLSVARNPRINT----RQAA 56
Query: 451 EVTIYTLRNGVVRVEDAENNLYA 519
EVTIY V+R E++ NLYA
Sbjct: 57 EVTIYA-NGSVIRAEESSENLYA 78
[35][TOP]
>UniRef100_Q18CN1 Putative RNA-binding protein n=1 Tax=Clostridium difficile 630
RepID=Q18CN1_CLOD6
Length = 183
Score = 60.1 bits (144), Expect = 9e-08
Identities = 34/81 (41%), Positives = 51/81 (62%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 453
+ III G+++ +TDAIK +E K++K + N+ H +V VT+SAR K QK+E
Sbjct: 1 MNIIISGKQIELTDAIKNKIETKLSK-LDNYIHPDTDVKVTVSAR--------KARQKIE 51
Query: 454 VTIYTLRNGVVRVEDAENNLY 516
VTI T+ ++R ED + NLY
Sbjct: 52 VTIATVNGPIIRAEDMQENLY 72
[36][TOP]
>UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP
Length = 213
Score = 59.7 bits (143), Expect = 1e-07
Identities = 32/82 (39%), Positives = 50/82 (60%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 453
++++I G+ + +TDAI+ YV +K+ KAV++F + EVDV LS T +Q E
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAVSHFQNITNEVDVHLSVARNPRIT---TKQAAE 57
Query: 454 VTIYTLRNGVVRVEDAENNLYA 519
VTI+ V+R E++ NLYA
Sbjct: 58 VTIFA-NGSVIRAEESSENLYA 78
[37][TOP]
>UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4
Length = 209
Score = 58.9 bits (141), Expect = 2e-07
Identities = 31/82 (37%), Positives = 49/82 (59%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 453
++++I G+ + +TDAI+ YV++K+ KA +F + E+DV LS +Q E
Sbjct: 1 MKLVIHGKNIEITDAIRDYVQQKIEKAANHFQNLTTEIDVHLSVA---RNPRINPKQTAE 57
Query: 454 VTIYTLRNGVVRVEDAENNLYA 519
VTIYT V+R E++ NLYA
Sbjct: 58 VTIYT-NGSVIRAEESSENLYA 78
[38][TOP]
>UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE
Length = 224
Score = 58.9 bits (141), Expect = 2e-07
Identities = 31/82 (37%), Positives = 52/82 (63%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 453
++++IQG+ + +TDAI+ +V +K+ KA A+F + +VDV LS + +Q E
Sbjct: 1 MKLVIQGKNIEITDAIRSHVHQKIEKATAHFQTLINKVDVCLSVQ---NNPRIAPKQTAE 57
Query: 454 VTIYTLRNGVVRVEDAENNLYA 519
VT++ L N VVR E++ +LYA
Sbjct: 58 VTVF-LNNVVVRAEESSESLYA 78
[39][TOP]
>UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DKM6_THEEB
Length = 209
Score = 58.5 bits (140), Expect = 3e-07
Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKV 450
+R++I G+ + +TD I+ Y+ +K+ +A ++F + + EVDV LS AR T +Q
Sbjct: 1 MRLVIHGKNIDITDGIRSYLNQKIERATSHFQNVINEVDVHLSVARNRSTA----PKQTA 56
Query: 451 EVTIYTLRNGVVRVEDAENNLYA 519
EVT++ + V+R E++ NLYA
Sbjct: 57 EVTVF-VNGSVIRAEESSENLYA 78
[40][TOP]
>UniRef100_B9NF07 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NF07_POPTR
Length = 127
Score = 58.2 bits (139), Expect = 3e-07
Identities = 31/73 (42%), Positives = 43/73 (58%)
Frame = +1
Query: 301 LPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG 480
+ +TD +K +VE+KV KAV FSH ++EVD LS RGG+ G + I R+G
Sbjct: 1 MQLTDTVKEHVEDKVGKAVQKFSHLVREVDARLSVRGGELGKGPR--------IRKCRHG 52
Query: 481 VVRVEDAENNLYA 519
VVR E+ +YA
Sbjct: 53 VVRAEEDSETIYA 65
[41][TOP]
>UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Microcoleus chthonoplastes PCC 7420
RepID=B4VJW0_9CYAN
Length = 215
Score = 57.4 bits (137), Expect = 6e-07
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKV 450
++++IQG+ + +TD+I+ YV +K+ KAV +F + EVDV LS AR T +Q
Sbjct: 1 MKLVIQGKNIEITDSIREYVNQKIEKAVNHFQNMTTEVDVHLSVARNPRINT----KQTA 56
Query: 451 EVTIYTLRNGVVRVEDAENNLYA 519
EVTIY + V+R +++ +LYA
Sbjct: 57 EVTIYANKT-VIRAQESSEDLYA 78
[42][TOP]
>UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC
6803 RepID=LRTA_SYNY3
Length = 191
Score = 57.4 bits (137), Expect = 6e-07
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 453
++++IQG + VT+AI YVEEKV +AV +F + +VDV LS T+ + K E
Sbjct: 1 MKLLIQGNNITVTEAIHDYVEEKVERAVKHFQNLTTKVDVHLSVARNARITN---KHKAE 57
Query: 454 VTIYTLRNG-VVRVEDAENNLYA 519
VT+Y NG V+R ++ NLYA
Sbjct: 58 VTVYA--NGTVIRAQEGSENLYA 78
[43][TOP]
>UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc
punctiforme PCC 73102 RepID=B2IVM1_NOSP7
Length = 214
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKV 450
++++I + + +TDAI+ YV +K+ KA ++F EVDV LS AR T Q
Sbjct: 1 MKLVIHSKNIEITDAIREYVHQKIEKAASHFQSITNEVDVHLSVARNPRINT----RQAA 56
Query: 451 EVTIYTLRNGVVRVEDAENNLYA 519
EVTIY V+R E++ NLYA
Sbjct: 57 EVTIYA-NGSVIRAEESSENLYA 78
[44][TOP]
>UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc
azollae' 0708 RepID=B9YPU1_ANAAZ
Length = 214
Score = 56.6 bits (135), Expect = 1e-06
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKV 450
++++I G+ + +TDAI+ YV +K+ +AV +F EV+V LS AR T +Q
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIERAVNHFQSITNEVNVHLSVARNPRIST----KQAA 56
Query: 451 EVTIYTLRNGVVRVEDAENNLYA 519
EVTIY V+R E++ NLYA
Sbjct: 57 EVTIYA-NGSVIRAEESSENLYA 78
[45][TOP]
>UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YIH4_9CYAN
Length = 212
Score = 56.6 bits (135), Expect = 1e-06
Identities = 32/83 (38%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 453
+++++QG+ L +T+AI YV +K+ KAV+++ EVDV LS +Q E
Sbjct: 1 MKLVVQGKNLEITEAIHEYVHQKITKAVSHYQQLTNEVDVHLSIA---RNPRINPKQTAE 57
Query: 454 VTIYTLRNG-VVRVEDAENNLYA 519
VTIY NG V+R +++ NLYA
Sbjct: 58 VTIYA--NGTVIRAQESSENLYA 78
[46][TOP]
>UniRef100_UPI00017F60C6 putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
QCD-23m63 RepID=UPI00017F60C6
Length = 185
Score = 56.2 bits (134), Expect = 1e-06
Identities = 32/82 (39%), Positives = 51/82 (62%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 453
++II+ GR++ +TD IK YV+ K+++ + + EV VT+SA+ K QKVE
Sbjct: 1 MQIIVSGRQMKLTDGIKGYVDGKLSR-LEKYLDPESEVKVTVSAK--------KDRQKVE 51
Query: 454 VTIYTLRNGVVRVEDAENNLYA 519
VTI + ++R ED E++LYA
Sbjct: 52 VTIIPINGQIIRAEDVEDDLYA 73
[47][TOP]
>UniRef100_UPI00017F5ACC putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
ATCC 43255 RepID=UPI00017F5ACC
Length = 185
Score = 56.2 bits (134), Expect = 1e-06
Identities = 32/82 (39%), Positives = 51/82 (62%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 453
++II+ GR++ +TD IK YV+ K+++ + + EV VT+SA+ K QKVE
Sbjct: 1 MQIIVSGRQMKLTDGIKGYVDGKLSR-LEKYLDPESEVKVTVSAK--------KDRQKVE 51
Query: 454 VTIYTLRNGVVRVEDAENNLYA 519
VTI + ++R ED E++LYA
Sbjct: 52 VTIIPINGQIIRAEDVEDDLYA 73
[48][TOP]
>UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI
Length = 215
Score = 56.2 bits (134), Expect = 1e-06
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 453
++++IQG+ + +TD+I YV +K+ KAV +F EVDV LS +Q E
Sbjct: 1 MKLVIQGKNIEITDSIHEYVNQKIEKAVNHFQQLTTEVDVHLSVA---RNPRINPKQTAE 57
Query: 454 VTIYTLRNG-VVRVEDAENNLYA 519
VTIY NG V+R +++ NLYA
Sbjct: 58 VTIYA--NGTVIRAQESSENLYA 78
[49][TOP]
>UniRef100_C9XLM7 Putative sigma 54 modulation protein n=3 Tax=Clostridium difficile
RepID=C9XLM7_CLODI
Length = 187
Score = 56.2 bits (134), Expect = 1e-06
Identities = 32/82 (39%), Positives = 51/82 (62%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 453
++II+ GR++ +TD IK YV+ K+++ + + EV VT+SA+ K QKVE
Sbjct: 1 MQIIVSGRQMKLTDGIKGYVDGKLSR-LEKYLDPESEVKVTVSAK--------KDRQKVE 51
Query: 454 VTIYTLRNGVVRVEDAENNLYA 519
VTI + ++R ED E++LYA
Sbjct: 52 VTIIPINGQIIRAEDVEDDLYA 73
[50][TOP]
>UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO
Length = 199
Score = 56.2 bits (134), Expect = 1e-06
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKV 450
++++IQG + VT+AI YV+EK+ KAV +F +VDV LS A+ G + + K
Sbjct: 1 MKLLIQGNNITVTEAIHDYVQEKLEKAVKHFQAITTKVDVHLSVAKNGRV----QNKHKA 56
Query: 451 EVTIYTLRNGVVRVEDAENNLYA 519
EVT+Y V+R ++ NLYA
Sbjct: 57 EVTVYA-NGAVIRAQEGSENLYA 78
[51][TOP]
>UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus
PCC 6301 RepID=Q5N179_SYNP6
Length = 207
Score = 55.5 bits (132), Expect = 2e-06
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKK--EQK 447
+++++QG + VT AI YV++K+ KAV+++ L E+DV LS H K Q
Sbjct: 1 MKLVVQGTNIDVTAAIHDYVQQKLDKAVSHYQSFLTEIDVHLS-----VAKHAKSNPRQT 55
Query: 448 VEVTIYTLRNG-VVRVEDAENNLYA 519
EVTIY NG V+R E+ NLYA
Sbjct: 56 AEVTIYA--NGTVIRAEECNENLYA 78
[52][TOP]
>UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7
Length = 207
Score = 55.5 bits (132), Expect = 2e-06
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKK--EQK 447
+++++QG + VT AI YV++K+ KAV+++ L E+DV LS H K Q
Sbjct: 1 MKLVVQGTNIDVTAAIHDYVQQKLDKAVSHYQSFLTEIDVHLS-----VAKHAKSNPRQT 55
Query: 448 VEVTIYTLRNG-VVRVEDAENNLYA 519
EVTIY NG V+R E+ NLYA
Sbjct: 56 AEVTIYA--NGTVIRAEECNENLYA 78
[53][TOP]
>UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0CDL4_ACAM1
Length = 212
Score = 54.7 bits (130), Expect = 4e-06
Identities = 28/82 (34%), Positives = 49/82 (59%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 453
++++I G+ + +TDAI+ YV +K+ KA ++ + E+DV LS T +Q E
Sbjct: 1 MKLVIHGKNIEITDAIREYVHQKIEKAANHYQNLTTEIDVHLSVARNPRIT---TKQTAE 57
Query: 454 VTIYTLRNGVVRVEDAENNLYA 519
VT++ + V+R E++ NLYA
Sbjct: 58 VTLF-VNGSVIRAEESSENLYA 78
[54][TOP]
>UniRef100_A8YEZ8 LrtA protein n=1 Tax=Microcystis aeruginosa PCC 7806
RepID=A8YEZ8_MICAE
Length = 199
Score = 54.7 bits (130), Expect = 4e-06
Identities = 33/83 (39%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 453
++++IQG + VT+AI YVE+K+ KAV +F+ +VDV LS + K E
Sbjct: 1 MKLLIQGNNIAVTEAIHDYVEQKLEKAVKHFNGITTKVDVHLSV---EKNARIPDRHKAE 57
Query: 454 VTIYTLRNG-VVRVEDAENNLYA 519
VT+Y NG V+R ++ NLYA
Sbjct: 58 VTVYA--NGTVIRAQEGSENLYA 78
[55][TOP]
>UniRef100_B7KLI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7424 RepID=B7KLI5_CYAP7
Length = 199
Score = 53.5 bits (127), Expect = 8e-06
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Frame = +1
Query: 274 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 453
++++IQG + VT+AI YV++K+ KAV +F +VDV LS + + K E
Sbjct: 1 MKLLIQGNNITVTEAIHDYVQQKLEKAVKHFQTLTTKVDVHLSVA---KNARIQNKHKAE 57
Query: 454 VTIYTLRNG-VVRVEDAENNLYA 519
VT+Y NG V+R ++ NLYA
Sbjct: 58 VTVYA--NGTVIRAQEGSENLYA 78