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[1][TOP] >UniRef100_P08475 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Chlamydomonas reinhardtii RepID=RBS2_CHLRE Length = 185 Score = 290 bits (741), Expect = 4e-77 Identities = 142/142 (100%), Positives = 142/142 (100%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 193 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF Sbjct: 1 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 60 Query: 194 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 373 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM Sbjct: 61 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 120 Query: 374 WKLPMFGCRDPMQVLREIVACT 439 WKLPMFGCRDPMQVLREIVACT Sbjct: 121 WKLPMFGCRDPMQVLREIVACT 142 [2][TOP] >UniRef100_P00873 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=2 Tax=Chlamydomonas reinhardtii RepID=RBS1_CHLRE Length = 185 Score = 287 bits (735), Expect = 2e-76 Identities = 140/142 (98%), Positives = 142/142 (100%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 193 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF Sbjct: 1 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 60 Query: 194 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 373 SYLPPL+DEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNESAIRFGSVSCLYYDNRYWTM Sbjct: 61 SYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTM 120 Query: 374 WKLPMFGCRDPMQVLREIVACT 439 WKLPMFGCRDPMQVLREIVACT Sbjct: 121 WKLPMFGCRDPMQVLREIVACT 142 [3][TOP] >UniRef100_Q84U90 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox carteri RepID=Q84U90_VOLCA Length = 185 Score = 275 bits (704), Expect = 9e-73 Identities = 130/142 (91%), Positives = 138/142 (97%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 193 MAA++AKSSV+A VARPARSSVRP+A LKPAVKAAPVAAPAQAN+MMVWTPVNNKMFETF Sbjct: 1 MAAIVAKSSVAAVVARPARSSVRPVAGLKPAVKAAPVAAPAQANKMMVWTPVNNKMFETF 60 Query: 194 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 373 SYLPPL+DEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNES +RFG VSCLYYDNRYWTM Sbjct: 61 SYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRFGPVSCLYYDNRYWTM 120 Query: 374 WKLPMFGCRDPMQVLREIVACT 439 WKLPMFGCRDPMQVLREIVACT Sbjct: 121 WKLPMFGCRDPMQVLREIVACT 142 [4][TOP] >UniRef100_Q84U92 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox carteri RepID=Q84U92_VOLCA Length = 185 Score = 272 bits (696), Expect = 7e-72 Identities = 127/142 (89%), Positives = 137/142 (96%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 193 MAA++AKSSV+ AV RPARSSVRP+A LKPA+KAAPVA+PAQAN+MMVWTPVNNKMFETF Sbjct: 1 MAAIVAKSSVATAVVRPARSSVRPVAVLKPAIKAAPVASPAQANKMMVWTPVNNKMFETF 60 Query: 194 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 373 SYLPPL+DEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNES +RFG VSCLYYDNRYWTM Sbjct: 61 SYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRFGPVSCLYYDNRYWTM 120 Query: 374 WKLPMFGCRDPMQVLREIVACT 439 WKLPMFGCRDPMQVLREIVACT Sbjct: 121 WKLPMFGCRDPMQVLREIVACT 142 [5][TOP] >UniRef100_Q84U91 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox carteri RepID=Q84U91_VOLCA Length = 185 Score = 269 bits (687), Expect = 8e-71 Identities = 127/142 (89%), Positives = 134/142 (94%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 193 MAAVIAKSSV+ AVARPARS VRP+A LKP+V+A PVA P QAN+MMVWTPVNNKMFETF Sbjct: 1 MAAVIAKSSVATAVARPARSGVRPVAVLKPSVRATPVATPTQANKMMVWTPVNNKMFETF 60 Query: 194 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 373 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNES +RFG VSCLYYDNRYWTM Sbjct: 61 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRFGPVSCLYYDNRYWTM 120 Query: 374 WKLPMFGCRDPMQVLREIVACT 439 WKLPMFGCRDPMQVLREIVACT Sbjct: 121 WKLPMFGCRDPMQVLREIVACT 142 [6][TOP] >UniRef100_A8JGP8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas reinhardtii RepID=A8JGP8_CHLRE Length = 188 Score = 217 bits (553), Expect(2) = 1e-68 Identities = 110/110 (100%), Positives = 110/110 (100%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 193 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF Sbjct: 1 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 60 Query: 194 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 343 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC Sbjct: 61 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 110 Score = 66.2 bits (160), Expect(2) = 1e-68 Identities = 30/30 (100%), Positives = 30/30 (100%) Frame = +1 Query: 352 RQPLLDHVEAAHVRLPRPHAGAARDRRLHQ 441 RQPLLDHVEAAHVRLPRPHAGAARDRRLHQ Sbjct: 111 RQPLLDHVEAAHVRLPRPHAGAARDRRLHQ 140 [7][TOP] >UniRef100_A8JGP5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas reinhardtii RepID=A8JGP5_CHLRE Length = 139 Score = 208 bits (529), Expect = 2e-52 Identities = 96/96 (100%), Positives = 96/96 (100%) Frame = +2 Query: 152 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 331 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG Sbjct: 1 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 60 Query: 332 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACT 439 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACT Sbjct: 61 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACT 96 [8][TOP] >UniRef100_Q5VBK1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Dunaliella tertiolecta RepID=Q5VBK1_DUNTE Length = 189 Score = 206 bits (523), Expect = 8e-52 Identities = 97/143 (67%), Positives = 119/143 (83%), Gaps = 1/143 (0%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPA-QANQMMVWTPVNNKMFET 190 MAA++AKS+ A +A+ +R++ + A+LKPAV+AAP A PA +ANQMMVW P+NNK FET Sbjct: 1 MAALLAKSASVAPMAKASRTATKVQASLKPAVRAAPKAQPAVRANQMMVWNPINNKQFET 60 Query: 191 FSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWT 370 FSYLPPL+ +QIA QVDYIV NGW PCLEFAE ++AYVS++SA+RFG+VS YYDNRYWT Sbjct: 61 FSYLPPLTADQIAKQVDYIVNNGWTPCLEFAEQNQAYVSSDSAVRFGAVSANYYDNRYWT 120 Query: 371 MWKLPMFGCRDPMQVLREIVACT 439 MWKLPMFGC DP QVL EI C+ Sbjct: 121 MWKLPMFGCTDPSQVLSEINKCS 143 [9][TOP] >UniRef100_Q5VBK0 Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit n=1 Tax=Dunaliella tertiolecta RepID=Q5VBK0_DUNTE Length = 188 Score = 197 bits (501), Expect = 3e-49 Identities = 99/144 (68%), Positives = 117/144 (81%), Gaps = 2/144 (1%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVA-APA-QANQMMVWTPVNNKMFE 187 MA++IAKS+ A VA +R+S + A+LKPAV+A P A APA +ANQMMVW P+NNK FE Sbjct: 1 MASLIAKSASVAPVA--SRTSTKVQASLKPAVRAVPKAQAPAVRANQMMVWQPINNKQFE 58 Query: 188 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 367 TFSYLPPL+ +QIA QVDYIV NGW PCLEFAE +AYVS++SA+RFG+VS YYDNRYW Sbjct: 59 TFSYLPPLTADQIARQVDYIVENGWTPCLEFAEEGQAYVSSDSAVRFGAVSANYYDNRYW 118 Query: 368 TMWKLPMFGCRDPMQVLREIVACT 439 TMWKLPMFGC DP QVL EI C+ Sbjct: 119 TMWKLPMFGCTDPSQVLSEINKCS 142 [10][TOP] >UniRef100_Q5XR40 Ribulose bisphosphate carboxylase small chain n=1 Tax=Dunaliella salina RepID=Q5XR40_DUNSA Length = 190 Score = 183 bits (465), Expect = 5e-45 Identities = 98/146 (67%), Positives = 111/146 (76%), Gaps = 4/146 (2%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARP-ARSSVRPMAALKPAV-KAAPVA-APA-QANQMMVWTPVNNKM 181 MAA+IAK+ AVA P +R S + A+LKPAV + AP A APA + NQMMVW PVNNK Sbjct: 1 MAALIAKTC--PAVATPISRGSTKVQASLKPAVTRPAPKAQAPAVRTNQMMVWRPVNNKQ 58 Query: 182 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 361 FETFSYLPPL+ +QIA QVDYIV NGWIPCLEF+E AYV+N + RFG VS YYDNR Sbjct: 59 FETFSYLPPLTADQIARQVDYIVGNGWIPCLEFSEESYAYVANTNTARFGPVSNNYYDNR 118 Query: 362 YWTMWKLPMFGCRDPMQVLREIVACT 439 YWTMWKLPMFGC DP QVL EI C+ Sbjct: 119 YWTMWKLPMFGCTDPAQVLMEIQKCS 144 [11][TOP] >UniRef100_C7FF11 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlorella pyrenoidosa RepID=C7FF11_CHLPY Length = 184 Score = 176 bits (447), Expect = 6e-43 Identities = 88/141 (62%), Positives = 101/141 (71%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 193 MA+ I+ S V A VA RS ++P AV + + + MMVWTPVNNK FETF Sbjct: 1 MASTISASLVKAPVATTQRSVLKPAGKTFKAVTVSN-GNVQKTSAMMVWTPVNNKFFETF 59 Query: 194 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 373 SYLPPLS +QIA QVDYIV NGW PCLEFA+ D AYVSN+S +RFG+VS Y DNRYWTM Sbjct: 60 SYLPPLSGDQIARQVDYIVLNGWTPCLEFADPDCAYVSNDSCVRFGNVSVGYQDNRYWTM 119 Query: 374 WKLPMFGCRDPMQVLREIVAC 436 WKLPMFGC DP QVL+EI C Sbjct: 120 WKLPMFGCTDPSQVLKEISNC 140 [12][TOP] >UniRef100_C7FF10 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlorella pyrenoidosa RepID=C7FF10_CHLPY Length = 181 Score = 168 bits (426), Expect = 2e-40 Identities = 79/137 (57%), Positives = 96/137 (70%), Gaps = 5/137 (3%) Frame = +2 Query: 41 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQAN-----QMMVWTPVNNKMFETFSYLP 205 ++ +A A +VRP+A LK A + + + M VWTP+NNKMFETFSYLP Sbjct: 1 MACTMAAIAPVAVRPVAGLKQAKNTSAARTVSNGSIQKTTAMQVWTPINNKMFETFSYLP 60 Query: 206 PLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLP 385 PL+D +I+ QVDYIV NGW PCLEFAES AY SNE+ IR + +CLYYDNRYWTMWKLP Sbjct: 61 PLTDAEISRQVDYIVNNGWTPCLEFAESASAYASNENCIRMNNTTCLYYDNRYWTMWKLP 120 Query: 386 MFGCRDPMQVLREIVAC 436 MFGC D QVL+E+ C Sbjct: 121 MFGCTDGHQVLQEVANC 137 [13][TOP] >UniRef100_P16133 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS5_ACECL Length = 184 Score = 168 bits (425), Expect = 2e-40 Identities = 84/142 (59%), Positives = 98/142 (69%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 193 MAA + ++ + ARSS P A A+ VA ++ +MMVW P NNKMFETF Sbjct: 1 MAAAMMNKTIVVSKDGCARSSSIPKVATNKMGFASAVAMK-KSREMMVWQPFNNKMFETF 59 Query: 194 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 373 SYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTM Sbjct: 60 SYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTM 119 Query: 374 WKLPMFGCRDPMQVLREIVACT 439 WKLPMFGC D QVL EI ACT Sbjct: 120 WKLPMFGCTDGSQVLSEIQACT 141 [14][TOP] >UniRef100_P17537 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Chlamydomonas moewusii RepID=RBS_CHLMO Length = 168 Score = 163 bits (412), Expect = 6e-39 Identities = 79/128 (61%), Positives = 95/128 (74%) Frame = +2 Query: 53 VARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAA 232 +A A SV AA + +AAPVAAPA A + VW PVNNK +ETFSYLPPL++++I Sbjct: 1 MASIAAKSVSLRAATR---RAAPVAAPADA-RFKVWQPVNNKQYETFSYLPPLTNQKIGR 56 Query: 233 QVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQ 412 QVDYI+ NGW PCLEFA+ ++VSN +A+R VS YYDNRYWTMWKLPMFGC DP Q Sbjct: 57 QVDYIINNGWTPCLEFADPSTSFVSNANAVRLQGVSAGYYDNRYWTMWKLPMFGCTDPSQ 116 Query: 413 VLREIVAC 436 VLRE+ AC Sbjct: 117 VLREVSAC 124 [15][TOP] >UniRef100_P16131 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS3_ACECL Length = 183 Score = 163 bits (412), Expect = 6e-39 Identities = 75/105 (71%), Positives = 81/105 (77%) Frame = +2 Query: 125 AAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYV 304 AA + MMVW P NNKMFETFSYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY Sbjct: 36 AAVQKCRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYA 95 Query: 305 SNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACT 439 NE+ IR G VS Y DNRYWTMWKLPMFGC D QVL EI ACT Sbjct: 96 GNENCIRMGPVSSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACT 140 [16][TOP] >UniRef100_Q30CC3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Haematococcus pluvialis RepID=Q30CC3_HAEPL Length = 141 Score = 161 bits (407), Expect = 2e-38 Identities = 69/93 (74%), Positives = 79/93 (84%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 MMVW P+NNK +ETFSYLPPL+ +QIA QVDY+V NGWIPCLEFA++ +AYVSN S +RF Sbjct: 1 MMVWQPINNKQYETFSYLPPLTSDQIARQVDYVVGNGWIPCLEFADASQAYVSNASTVRF 60 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 GSVS YYDNRYWT+WKLPMFGC DP VL EI Sbjct: 61 GSVSACYYDNRYWTLWKLPMFGCTDPSAVLTEI 93 [17][TOP] >UniRef100_P16132 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS4_ACECL Length = 182 Score = 161 bits (407), Expect = 2e-38 Identities = 77/127 (60%), Positives = 90/127 (70%), Gaps = 2/127 (1%) Frame = +2 Query: 65 ARSSVRPMAALKPAV--KAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQV 238 ++ +P A K ++ K A + +MMVW P NNKMFETFSYLPPL+DEQI+ QV Sbjct: 13 SKGCTKPSAVPKVSINRKGFLNTAMNKKREMMVWQPFNNKMFETFSYLPPLTDEQISKQV 72 Query: 239 DYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVL 418 DYI+AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTMWKLPMFGC D QVL Sbjct: 73 DYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVL 132 Query: 419 REIVACT 439 EI ACT Sbjct: 133 SEIQACT 139 [18][TOP] >UniRef100_Q38692 Ribulose bisphosphate carboxylase small chain 6, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS6_ACECL Length = 182 Score = 160 bits (405), Expect = 4e-38 Identities = 79/143 (55%), Positives = 99/143 (69%), Gaps = 2/143 (1%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPV--AAPAQANQMMVWTPVNNKMFET 190 A +++K+ +S+ + +P+A K ++ V +A + +MMVW P NNKMFET Sbjct: 3 ATMMSKTIISS------KQCSKPIAPPKVSINKGFVNTSAAIKNREMMVWQPFNNKMFET 56 Query: 191 FSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWT 370 FSYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY NE+ I G V+ Y DNRYWT Sbjct: 57 FSYLPPLTDEQISKQVDYILANAWTPCLEFAASDQAYAGNENCITMGPVASTYQDNRYWT 116 Query: 371 MWKLPMFGCRDPMQVLREIVACT 439 MWKLPMFGC D QVL EI ACT Sbjct: 117 MWKLPMFGCTDGSQVLTEIQACT 139 [19][TOP] >UniRef100_P16138 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Acetabularia acetabulum RepID=RBS5_ACEAT Length = 183 Score = 159 bits (403), Expect = 7e-38 Identities = 76/123 (61%), Positives = 87/123 (70%), Gaps = 3/123 (2%) Frame = +2 Query: 80 RPMAALKPAVKAAPVAAPAQANQ---MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIV 250 +P A K + A + N+ MMVW P NNKMFETFS+LPPL+DEQI+ QVDYI+ Sbjct: 18 KPAAVPKVVMSKGGFARTSAVNKNRDMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYIL 77 Query: 251 ANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIV 430 AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTMWKLPMFGC D QVL EI Sbjct: 78 ANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQ 137 Query: 431 ACT 439 ACT Sbjct: 138 ACT 140 [20][TOP] >UniRef100_C4P6Y2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ankistrodesmus convolutus RepID=C4P6Y2_9CHLO Length = 165 Score = 159 bits (402), Expect = 9e-38 Identities = 76/122 (62%), Positives = 89/122 (72%), Gaps = 1/122 (0%) Frame = +2 Query: 74 SVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVA 253 ++R A + A KA A PA+ MVW PVNNK FETFSYLPPL+DEQIA QVDYIV Sbjct: 2 ALRLTAGSRVAAKAPVAAKPAK---FMVWQPVNNKFFETFSYLPPLNDEQIARQVDYIVN 58 Query: 254 NGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIV 430 NGW PCLEF++S AY+SN + +R + YYDNRYWT+WKLPMFGC DP QVL+EI Sbjct: 59 NGWTPCLEFSDSQTAYMSNTNVVRIQNGATANYYDNRYWTLWKLPMFGCTDPSQVLKEIA 118 Query: 431 AC 436 AC Sbjct: 119 AC 120 [21][TOP] >UniRef100_P16137 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Acetabularia acetabulum RepID=RBS4_ACEAT Length = 182 Score = 159 bits (402), Expect = 9e-38 Identities = 83/142 (58%), Positives = 97/142 (68%), Gaps = 1/142 (0%) Frame = +2 Query: 17 AAVIAKSSV-SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 193 AA++ KS V S +PA + P A+ VA + +MMVW P NNKMFETF Sbjct: 3 AAMMNKSVVLSKQCTKPAAT---PKVVTSKRSFASTVAN--KNREMMVWQPFNNKMFETF 57 Query: 194 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 373 S+LPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTM Sbjct: 58 SFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTM 117 Query: 374 WKLPMFGCRDPMQVLREIVACT 439 WKLPMFGC D QVL EI ACT Sbjct: 118 WKLPMFGCTDGSQVLSEIQACT 139 [22][TOP] >UniRef100_P16136 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Acetabularia acetabulum RepID=RBS3_ACEAT Length = 182 Score = 159 bits (402), Expect = 9e-38 Identities = 82/144 (56%), Positives = 95/144 (65%), Gaps = 2/144 (1%) Frame = +2 Query: 14 MAAVIAKSSV--SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFE 187 MA+++ SV S A+P S P L A +A + MMVW P NNKMFE Sbjct: 1 MASIMMNKSVVLSKECAKPLAS---PKVTLNKRGFATTIATKNRG--MMVWQPFNNKMFE 55 Query: 188 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 367 TFS+LPPL+DEQI+ QVDYI+ N W PCLEFA SD+AY NE+ IR G V+ Y DNRYW Sbjct: 56 TFSFLPPLTDEQISKQVDYILINSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYW 115 Query: 368 TMWKLPMFGCRDPMQVLREIVACT 439 TMWKLPMFGC D QVL EI ACT Sbjct: 116 TMWKLPMFGCTDASQVLSEIQACT 139 [23][TOP] >UniRef100_P16134 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=2 Tax=Acetabularia acetabulum RepID=RBS1_ACEAT Length = 182 Score = 159 bits (402), Expect = 9e-38 Identities = 81/144 (56%), Positives = 96/144 (66%), Gaps = 2/144 (1%) Frame = +2 Query: 14 MAAVIAKSSV--SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFE 187 MA+++ SV S A+P + P L A +A + +MMVW P NNKMFE Sbjct: 1 MASIMMNKSVVLSKECAKPLAT---PKVTLNKRGFATTIAT--KNREMMVWQPFNNKMFE 55 Query: 188 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 367 TFS+LPPL+DEQI+ QVDYI+ N W PCLEFA SD+AY NE+ IR G V+ Y DNRYW Sbjct: 56 TFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYW 115 Query: 368 TMWKLPMFGCRDPMQVLREIVACT 439 TMWKLPMFGC D QVL EI ACT Sbjct: 116 TMWKLPMFGCTDGSQVLSEIQACT 139 [24][TOP] >UniRef100_Q9XFT5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas sp. HS-5 RepID=Q9XFT5_9CHLO Length = 158 Score = 158 bits (399), Expect = 2e-37 Identities = 71/110 (64%), Positives = 86/110 (78%) Frame = +2 Query: 110 KAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAES 289 KA PVAAP +A+ VW PVNNK +ETFSYLP L+ EQIA QVDY++ NG+ PCLEFA++ Sbjct: 13 KATPVAAP-RASAFKVWQPVNNKQYETFSYLPALTSEQIARQVDYVIRNGYTPCLEFADA 71 Query: 290 DKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACT 439 ++VSNE+ +RF VS YYDNRYWTMWKLPMFGC D QVL+E+ CT Sbjct: 72 AYSFVSNENTVRFSGVSANYYDNRYWTMWKLPMFGCTDAAQVLKEVALCT 121 [25][TOP] >UniRef100_Q38693 Ribulose bisphosphate carboxylase small chain 7, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS7_ACECL Length = 183 Score = 157 bits (397), Expect = 3e-37 Identities = 70/97 (72%), Positives = 78/97 (80%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 MMVW P NNKMFETFSYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY NE+ IR Sbjct: 44 MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRM 103 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACT 439 G V+ Y DNRYWTMWKLPMFGC D QVL ++ ACT Sbjct: 104 GPVASTYQDNRYWTMWKLPMFGCTDGSQVLSDMQACT 140 [26][TOP] >UniRef100_B3VSA1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Parietochloris incisa RepID=B3VSA1_9CHLO Length = 189 Score = 153 bits (386), Expect = 7e-36 Identities = 81/144 (56%), Positives = 105/144 (72%), Gaps = 6/144 (4%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQAN-----QMMVWTPVNN 175 MAA A S +SA VA A ++ R + AL PA +AA A +N QMMVW P NN Sbjct: 1 MAAACA-SLLSAPVAVVASAAPARSLKALAPA-RAATFAQKTVSNGIKTRQMMVWQPTNN 58 Query: 176 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 355 + FET S+LPPL+D+QIA QVDY++ NGW+PCLEF+E++ AYV++++ IR+G+V+ Y D Sbjct: 59 RYFETLSFLPPLTDDQIAKQVDYMINNGWVPCLEFSEANMAYVASDNCIRYGNVASGYQD 118 Query: 356 NRYWTMWKLPMFGCRDPMQVLREI 427 NRYWTM+KLPMFGC DP QVL EI Sbjct: 119 NRYWTMFKLPMFGCTDPGQVLTEI 142 [27][TOP] >UniRef100_P26985 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Batophora oerstedii RepID=RBS_BATOE Length = 175 Score = 150 bits (380), Expect = 3e-35 Identities = 66/102 (64%), Positives = 79/102 (77%) Frame = +2 Query: 134 AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNE 313 +++ MMVW P NNK FETFSYLPPL+D+QI QVDYI+ N W PCLEFA SD+AYV+++ Sbjct: 31 SKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFAGSDQAYVTHD 90 Query: 314 SAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACT 439 + +R G + Y DNRYWTMWKLPMFGC D QVL EI ACT Sbjct: 91 NTVRMGDCASTYQDNRYWTMWKLPMFGCIDGSQVLTEISACT 132 [28][TOP] >UniRef100_Q9ZRA1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Chloromonas sp. ANT3 RepID=Q9ZRA1_9CHLO Length = 140 Score = 149 bits (376), Expect = 9e-35 Identities = 64/94 (68%), Positives = 74/94 (78%) Frame = +2 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW PVNNK +ETFSYLP L+ EQIA QVDY++ NGW PCLEFA+ ++VSNE+ +RF Sbjct: 3 VWQPVNNKQYETFSYLPALTTEQIAKQVDYVIRNGWTPCLEFADPSSSFVSNENTVRFRG 62 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 S YYDNRYWTMWKLPMFGC D QVL+EI AC Sbjct: 63 ASSNYYDNRYWTMWKLPMFGCTDASQVLKEIAAC 96 [29][TOP] >UniRef100_Q9STC5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Euglena gracilis RepID=Q9STC5_EUGGR Length = 271 Score = 148 bits (374), Expect = 2e-34 Identities = 70/117 (59%), Positives = 81/117 (69%) Frame = +2 Query: 86 MAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWI 265 MA +KP K A V M VW PVNNK FETFSYLPPLSD QIA QVD I+A G Sbjct: 116 MAMMKP--KVAAVLPFTSEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLS 173 Query: 266 PCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC D QVLREI C Sbjct: 174 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISEC 230 [30][TOP] >UniRef100_P16881 Ribulose bisphosphate carboxylase small chain P8, chloroplastic n=1 Tax=Euglena gracilis RepID=RBS_EUGGR Length = 1273 Score = 148 bits (374), Expect = 2e-34 Identities = 70/117 (59%), Positives = 81/117 (69%) Frame = +2 Query: 86 MAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWI 265 MA +KP K A V M VW PVNNK FETFSYLPPLSD QIA QVD I+A G Sbjct: 116 MAMMKP--KVAAVLPFTSEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLS 173 Query: 266 PCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC D QVLREI C Sbjct: 174 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISEC 230 Score = 146 bits (368), Expect = 8e-34 Identities = 71/132 (53%), Positives = 87/132 (65%) Frame = +2 Query: 41 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 220 +S V RP+ SS + + +AA +M VW PVNNK FETFSYLPPLSD Sbjct: 827 ISFVVQRPSGSS---------SSSSWGMAAMTGEKEMKVWNPVNNKKFETFSYLPPLSDA 877 Query: 221 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 400 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 878 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 937 Query: 401 DPMQVLREIVAC 436 D QVLREI C Sbjct: 938 DASQVLREISEC 949 Score = 145 bits (367), Expect = 1e-33 Identities = 71/132 (53%), Positives = 85/132 (64%) Frame = +2 Query: 41 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 220 +S V RP+ SS +AA +M VW PVNNK FETFSYLPPLSD Sbjct: 1115 ISFVVQRPSGSSSSSWG----------MAAMTGEKEMKVWNPVNNKKFETFSYLPPLSDA 1164 Query: 221 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 400 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 1165 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 1224 Query: 401 DPMQVLREIVAC 436 D QVLREI C Sbjct: 1225 DASQVLREISEC 1236 Score = 145 bits (365), Expect = 2e-33 Identities = 71/132 (53%), Positives = 84/132 (63%) Frame = +2 Query: 41 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 220 +S V RP+ SS +AA M VW PVNNK FETFSYLPPLSD Sbjct: 253 ISFVVQRPSGSSSSSWG----------MAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 302 Query: 221 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 400 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 303 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 362 Query: 401 DPMQVLREIVAC 436 D QVLREI C Sbjct: 363 DASQVLREISEC 374 Score = 145 bits (365), Expect = 2e-33 Identities = 71/132 (53%), Positives = 84/132 (63%) Frame = +2 Query: 41 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 220 +S V RP+ SS +AA M VW PVNNK FETFSYLPPLSD Sbjct: 540 ISFVVQRPSGSSSSSWG----------MAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 589 Query: 221 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 400 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 590 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 649 Query: 401 DPMQVLREIVAC 436 D QVLREI C Sbjct: 650 DASQVLREISEC 661 Score = 145 bits (365), Expect = 2e-33 Identities = 71/132 (53%), Positives = 85/132 (64%) Frame = +2 Query: 41 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 220 +S V RP+ SS + +AA M VW PVNNK FETFSYLPPLSD Sbjct: 684 ISFVVQRPSGSS-----------SSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 732 Query: 221 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 400 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 733 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 792 Query: 401 DPMQVLREIVAC 436 D QVLREI C Sbjct: 793 DASQVLREISEC 804 Score = 145 bits (365), Expect = 2e-33 Identities = 71/132 (53%), Positives = 84/132 (63%) Frame = +2 Query: 41 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 220 +S V RP+ SS +AA M VW PVNNK FETFSYLPPLSD Sbjct: 971 ISFVVQRPSGSSSSSWG----------MAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 1020 Query: 221 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 400 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 1021 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 1080 Query: 401 DPMQVLREIVAC 436 D QVLREI C Sbjct: 1081 DASQVLREISEC 1092 Score = 143 bits (360), Expect = 7e-33 Identities = 70/132 (53%), Positives = 84/132 (63%) Frame = +2 Query: 41 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 220 +S V RP+ SS + +AA M VW PVNNK FETFSYLPPLSD Sbjct: 397 ISFVVQRPSGSS-----------SSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 445 Query: 221 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 400 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDN YWTMWKLPMFGC Sbjct: 446 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNHYWTMWKLPMFGCT 505 Query: 401 DPMQVLREIVAC 436 D QVLREI C Sbjct: 506 DASQVLREISEC 517 [31][TOP] >UniRef100_Q68BK9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris bacillaris RepID=Q68BK9_NANBA Length = 182 Score = 148 bits (373), Expect = 2e-34 Identities = 71/142 (50%), Positives = 90/142 (63%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 193 MA+ IA S+ + VA + + A V V + M+VWTP+NNK FETF Sbjct: 1 MASTIAFSTAAVRVAPITKVNATSTKARTAFVSNGTVK---KTTAMLVWTPINNKFFETF 57 Query: 194 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 373 S+LPPLSD +I QVDYIV NGW PCLEF++ + AY+ + + +R S Y DNRYW+M Sbjct: 58 SFLPPLSDSEITKQVDYIVRNGWTPCLEFSDPEGAYIGDTNTVRLQGTSAGYQDNRYWSM 117 Query: 374 WKLPMFGCRDPMQVLREIVACT 439 WKLPMFGC D QVL+EI CT Sbjct: 118 WKLPMFGCTDGSQVLKEIAGCT 139 [32][TOP] >UniRef100_Q68BL0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris bacillaris RepID=Q68BL0_NANBA Length = 182 Score = 147 bits (372), Expect = 3e-34 Identities = 70/142 (49%), Positives = 90/142 (63%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 193 MA+ IA S+ + +A + + A V V + M+VWTP+NNK FETF Sbjct: 1 MASTIAISTAAVRIAPITKVNAASTKARTAFVSNGTVK---KTTAMLVWTPINNKFFETF 57 Query: 194 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 373 S+LPPLSD +I QVDYIV NGW PCLEF++ + AY+ + + +R S Y DNRYW+M Sbjct: 58 SFLPPLSDSEITKQVDYIVRNGWTPCLEFSDPEGAYIGDTNTVRLQGTSAGYQDNRYWSM 117 Query: 374 WKLPMFGCRDPMQVLREIVACT 439 WKLPMFGC D QVL+EI CT Sbjct: 118 WKLPMFGCTDGSQVLKEIAGCT 139 [33][TOP] >UniRef100_Q68BK3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris bacillaris RepID=Q68BK3_NANBA Length = 180 Score = 144 bits (364), Expect = 2e-33 Identities = 74/142 (52%), Positives = 92/142 (64%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 193 MA+ +A + A+ RP + V+ A K V A + + MVWTPVNNK FETF Sbjct: 1 MASALA---FTPALVRP--TGVKTTVASKKNVFAVSNSTIKNTSAFMVWTPVNNKFFETF 55 Query: 194 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 373 S+LPPLS+ +I+ QVDY+V N + PCLEF+E + AYV + S IR S Y DNRYW M Sbjct: 56 SFLPPLSESEISKQVDYMVRNAFTPCLEFSEPENAYVGDASTIRLCGTSSGYQDNRYWPM 115 Query: 374 WKLPMFGCRDPMQVLREIVACT 439 WKLPMFGC D QVL+EI ACT Sbjct: 116 WKLPMFGCTDGSQVLKEIAACT 137 [34][TOP] >UniRef100_A7Y7F5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Chlorella pyrenoidosa RepID=A7Y7F5_CHLPY Length = 82 Score = 144 bits (363), Expect = 3e-33 Identities = 64/81 (79%), Positives = 69/81 (85%) Frame = +2 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW PVNNK FETFSYLPPLS +QIA QVDYIV NGW PCLEFA+ D AYVSN+S +RFG+ Sbjct: 1 VWKPVNNKFFETFSYLPPLSGDQIARQVDYIVLNGWTPCLEFADPDCAYVSNDSCVRFGN 60 Query: 335 VSCLYYDNRYWTMWKLPMFGC 397 VS Y DNRYWTMWKLPMFGC Sbjct: 61 VSVGYQDNRYWTMWKLPMFGC 81 [35][TOP] >UniRef100_C1E329 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas sp. RCC299 RepID=C1E329_9CHLO Length = 191 Score = 138 bits (347), Expect = 2e-31 Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 4/122 (3%) Frame = +2 Query: 86 MAALKPAVKAAPVAAPAQA---NQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVAN 256 ++A+ P + APV + +A N MMVW P NK FETFS+LPPLSD+++A QV Y++ N Sbjct: 4 ISAVAPVLNKAPVVSTGKAANTNSMMVWQPHGNKFFETFSFLPPLSDQEVARQVQYLLNN 63 Query: 257 GWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVA 433 GW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC +P +VL+EI A Sbjct: 64 GWTPCIEFESAAKAYADTHGWSGLDSSVTAGYYDNRYWVMWKLPMYGCTNPEEVLQEIRA 123 Query: 434 CT 439 CT Sbjct: 124 CT 125 [36][TOP] >UniRef100_C1E330 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas sp. RCC299 RepID=C1E330_9CHLO Length = 179 Score = 137 bits (346), Expect = 3e-31 Identities = 64/122 (52%), Positives = 83/122 (68%), Gaps = 4/122 (3%) Frame = +2 Query: 86 MAALKPAVKAAPVAAPAQA---NQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVAN 256 ++A+ P + APV + +A N MMVW P NK FETFS+LPPLSD+++A QV Y++ N Sbjct: 4 ISAVAPVLNKAPVVSTGKAANTNSMMVWQPHGNKFFETFSFLPPLSDQEVARQVQYLLNN 63 Query: 257 GWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVA 433 GW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC +P +VL+EI A Sbjct: 64 GWTPCIEFESAAKAYADTHGWSGLDSSVTAGYYDNRYWVMWKLPMYGCTNPDEVLQEIRA 123 Query: 434 CT 439 CT Sbjct: 124 CT 125 [37][TOP] >UniRef100_C1N9I5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N9I5_9CHLO Length = 186 Score = 136 bits (342), Expect = 8e-31 Identities = 65/126 (51%), Positives = 81/126 (64%), Gaps = 1/126 (0%) Frame = +2 Query: 65 ARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDY 244 A SV P+ A PAV + +++ M VW P NNK FETFS+LPPLSD++IA QV Y Sbjct: 3 ALCSVAPVVAKVPAVSTGKAS---KSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQVQY 59 Query: 245 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLR 421 ++ NGW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC P +VL Sbjct: 60 LINNGWAPCIEFEGAGKAYCDTHGWSGLDSSVNAGYYDNRYWVMWKLPMYGCTSPDEVLA 119 Query: 422 EIVACT 439 E+ ACT Sbjct: 120 EVRACT 125 [38][TOP] >UniRef100_C1N9I4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N9I4_9CHLO Length = 183 Score = 136 bits (342), Expect = 8e-31 Identities = 65/126 (51%), Positives = 81/126 (64%), Gaps = 1/126 (0%) Frame = +2 Query: 65 ARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDY 244 A SV P+ A PAV + +++ M VW P NNK FETFS+LPPLSD++IA QV Y Sbjct: 3 ALCSVAPVVAKVPAVSTGKAS---KSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQVQY 59 Query: 245 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLR 421 ++ NGW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC P +VL Sbjct: 60 LINNGWAPCIEFEGAGKAYCDTHGWSGLDSSVNAGYYDNRYWVMWKLPMYGCTSPDEVLA 119 Query: 422 EIVACT 439 E+ ACT Sbjct: 120 EVRACT 125 [39][TOP] >UniRef100_C1N9I3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N9I3_9CHLO Length = 204 Score = 136 bits (342), Expect = 8e-31 Identities = 65/126 (51%), Positives = 81/126 (64%), Gaps = 1/126 (0%) Frame = +2 Query: 65 ARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDY 244 A SV P+ A PAV + +++ M VW P NNK FETFS+LPPLSD++IA QV Y Sbjct: 3 ALCSVAPVVAKVPAVSTGKAS---KSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQVQY 59 Query: 245 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLR 421 ++ NGW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC P +VL Sbjct: 60 LINNGWAPCIEFEGAGKAYCDTHGWSGLDSSVNAGYYDNRYWVMWKLPMYGCTSPDEVLA 119 Query: 422 EIVACT 439 E+ ACT Sbjct: 120 EVRACT 125 [40][TOP] >UniRef100_Q7M229 Ribulose bisphosphate carboxylase small chain n=1 Tax=Euglena gracilis RepID=Q7M229_EUGGR Length = 138 Score = 135 bits (341), Expect = 1e-30 Identities = 62/100 (62%), Positives = 76/100 (76%), Gaps = 7/100 (7%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFA---ESDKA----YVS 307 M VW PVNNK +ETFSYLPPLSD +IA QVD I+A GWIPCLEF+ S++A Y++ Sbjct: 1 MKVWNPVNNKFWETFSYLPPLSDREIAKQVDMIIAKGWIPCLEFSLREISERAYPCCYIA 60 Query: 308 NESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 N++ +RF + YYDNRYWTMWKLPMFGC D QVL+E+ Sbjct: 61 NDNTVRFSCTAAGYYDNRYWTMWKLPMFGCTDASQVLKEL 100 [41][TOP] >UniRef100_P16129 Ribulose bisphosphate carboxylase small chain 1 (Fragment) n=1 Tax=Acetabularia peniculus RepID=RBS1_ACECL Length = 126 Score = 132 bits (332), Expect = 1e-29 Identities = 59/83 (71%), Positives = 66/83 (79%) Frame = +2 Query: 191 FSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWT 370 FSYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY N++ IR G V+ Y DNRYWT Sbjct: 1 FSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNDNCIRMGPVASTYQDNRYWT 60 Query: 371 MWKLPMFGCRDPMQVLREIVACT 439 MWKLPMFGC D QVL EI ACT Sbjct: 61 MWKLPMFGCTDGSQVLSEIQACT 83 [42][TOP] >UniRef100_Q33BU5 RuBisCO small subunits (Fragment) n=1 Tax=Chlorella pyrenoidosa RepID=Q33BU5_CHLPY Length = 124 Score = 129 bits (323), Expect = 1e-28 Identities = 56/80 (70%), Positives = 63/80 (78%) Frame = +2 Query: 197 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 376 YLPPL+D +I+ QVDYIV NGW PCLEFAES AY SNE+ IR + +CLYYDNRYWTMW Sbjct: 1 YLPPLTDAEISRQVDYIVNNGWTPCLEFAESTSAYASNENCIRMNNTTCLYYDNRYWTMW 60 Query: 377 KLPMFGCRDPMQVLREIVAC 436 KLPMFGC D QVL E+ C Sbjct: 61 KLPMFGCTDGHQVLAEVSNC 80 [43][TOP] >UniRef100_A4SA22 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4SA22_OSTLU Length = 169 Score = 127 bits (319), Expect = 4e-28 Identities = 59/123 (47%), Positives = 77/123 (62%), Gaps = 1/123 (0%) Frame = +2 Query: 71 SSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIV 250 S++ +A A A A MM+W P NKMFETFS+LPPLSD +I+ QV Y++ Sbjct: 2 SAITQASAQVAKTVAVTTGKVANAKSMMIWRPHGNKMFETFSFLPPLSDAEISKQVQYLL 61 Query: 251 ANGWIPCLEFAESDKAYVSNES-AIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 NGW PC+EF +S AY A S++ YYDNRYW MWKLPM+GC++P +V+ EI Sbjct: 62 NNGWTPCIEFEDSAHAYTDGHGWANMDTSINAGYYDNRYWVMWKLPMYGCQNPDEVIAEI 121 Query: 428 VAC 436 C Sbjct: 122 NTC 124 [44][TOP] >UniRef100_A9TKI7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TKI7_PHYPA Length = 181 Score = 125 bits (314), Expect = 1e-27 Identities = 72/157 (45%), Positives = 90/157 (57%), Gaps = 16/157 (10%) Frame = +2 Query: 14 MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------ 148 MA+V+A S+V S+AV+ +SV+ + LK + + A + Q Sbjct: 1 MASVVATSTVVAPAAFAASSSAVSTSESTSVKAFSGLKSSTLFSSKAQSLSSVQNGSRVQ 60 Query: 149 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 325 M VW P+ FETFSYLPPLSD+ IA QVDY++ IPCLEF +D +N S Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVDYMIQQKLIPCLEFDNADGVSRTNNS--- 117 Query: 326 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 S YYD RYWTMWKLPMFGC+DP QVLREI C Sbjct: 118 ----SPGYYDGRYWTMWKLPMFGCQDPAQVLREIEEC 150 [45][TOP] >UniRef100_Q00SG4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus tauri RepID=Q00SG4_OSTTA Length = 168 Score = 124 bits (310), Expect = 4e-27 Identities = 53/99 (53%), Positives = 69/99 (69%), Gaps = 1/99 (1%) Frame = +2 Query: 134 AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNE 313 A A MM+W P NKMFETFS+LPPLSD +IA Q Y++ NGW PC+EF +++ AY Sbjct: 22 ANAKSMMIWRPHGNKMFETFSFLPPLSDAEIAKQCQYLLNNGWTPCIEFEDAEHAYADGH 81 Query: 314 SAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 S++ LYYDNRYW MWKLPM+GC++ +VL E+ Sbjct: 82 GWSNLDSSINSLYYDNRYWVMWKLPMYGCQNTDEVLAEV 120 [46][TOP] >UniRef100_Q9SXH1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Physcomitrella patens RepID=Q9SXH1_PHYPA Length = 214 Score = 123 bits (309), Expect = 6e-27 Identities = 68/149 (45%), Positives = 85/149 (57%), Gaps = 8/149 (5%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAV-------KAAPVAAPAQANQMMVWTPV 169 + A +A S+ V P+ SS V+ + LK A K + V ++ M VW P+ Sbjct: 39 VVAPVALGGASSCVGAPSESSSVKAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPI 98 Query: 170 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 349 FETFSYLPPL+D+QIA QVDY++ IPC+EF +N S G+ S Y Sbjct: 99 GQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFS----GAGSSGY 154 Query: 350 YDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YD RYWTMWKLPMFGC D QVLREI C Sbjct: 155 YDGRYWTMWKLPMFGCTDSSQVLREIQEC 183 [47][TOP] >UniRef100_Q8S322 Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (Fragment) n=1 Tax=Acetabularia acetabulum RepID=Q8S322_ACEAT Length = 126 Score = 123 bits (309), Expect = 6e-27 Identities = 55/83 (66%), Positives = 64/83 (77%) Frame = +2 Query: 191 FSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWT 370 +S+LPPL+DEQI+ QVDYI+AN W CLEFA SD+AY N++ IR V+ Y DNRYWT Sbjct: 1 YSFLPPLTDEQISKQVDYILANSWTACLEFAASDQAYAGNDNCIRMRPVASTYQDNRYWT 60 Query: 371 MWKLPMFGCRDPMQVLREIVACT 439 MWKLPMFGC D QVL EI ACT Sbjct: 61 MWKLPMFGCTDGSQVLSEIQACT 83 [48][TOP] >UniRef100_B6RHQ3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Miscanthus x giganteus RepID=B6RHQ3_9POAL Length = 169 Score = 123 bits (309), Expect = 6e-27 Identities = 60/135 (44%), Positives = 79/135 (58%) Frame = +2 Query: 23 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 202 V+A S+ + A + +S+ A +P A V+ + M VW NK FET SYL Sbjct: 5 VMASSATAVAPFQGLKSTASLPVARRPTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64 Query: 203 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 382 PPL++EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKL Sbjct: 65 PPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117 Query: 383 PMFGCRDPMQVLREI 427 PMFGC D QV +E+ Sbjct: 118 PMFGCTDASQVYKEL 132 [49][TOP] >UniRef100_A9TCL7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TCL7_PHYPA Length = 184 Score = 123 bits (309), Expect = 6e-27 Identities = 70/151 (46%), Positives = 86/151 (56%), Gaps = 11/151 (7%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS----VRPMAALKPAV-------KAAPVAAPAQANQMMVWT 163 +AV A S+ AA + A S+ V+ + LKPA K V ++ M VW Sbjct: 7 SAVAAPVSLGAAASSVAASNESATVKAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWN 66 Query: 164 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 343 P+ FETFSYLPPL+D+QIA QVDY++ IPC+EF +N S G+ S Sbjct: 67 PIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFS----GAGSS 122 Query: 344 LYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D QVLREI C Sbjct: 123 GYYDGRYWTMWKLPMFGCTDSSQVLREIQEC 153 [50][TOP] >UniRef100_Q75WT7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=Q75WT7_PHYPA Length = 184 Score = 122 bits (307), Expect = 9e-27 Identities = 69/148 (46%), Positives = 86/148 (58%), Gaps = 7/148 (4%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKPAV-------KAAPVAAPAQANQMMVWTPVN 172 ++ +A SSV+A+ SSV+ + LK A + + V ++ M VW P+ Sbjct: 13 VSVTVASSSVAAS---RESSSVKAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIG 69 Query: 173 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 352 FETFSYLPPLSD+QIA QVDY++ IPC+EF +N S GS S YY Sbjct: 70 QPKFETFSYLPPLSDDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFS----GSGSSGYY 125 Query: 353 DNRYWTMWKLPMFGCRDPMQVLREIVAC 436 D RYWTMWKLPMFGC D QVLREI C Sbjct: 126 DGRYWTMWKLPMFGCTDSSQVLREIQEC 153 [51][TOP] >UniRef100_A9SCN2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCN2_PHYPA Length = 182 Score = 121 bits (304), Expect = 2e-26 Identities = 70/157 (44%), Positives = 92/157 (58%), Gaps = 16/157 (10%) Frame = +2 Query: 14 MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAV----KAAPVAAPAQANQ-- 148 MA+V+A SSV S++V+ +SV+ + LK A KA +++ ++ Sbjct: 1 MASVVAASSVVAPATFVAASSSVSNSKSNSVKAFSGLKSATLFTSKAETLSSVQNGSRVQ 60 Query: 149 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 325 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V++ R Sbjct: 61 CMQVWNPIGQTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFD------VNSNGVSR 114 Query: 326 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 + S YYD RYWTMWKLPMFGC+D QVLREI C Sbjct: 115 ANNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEEC 151 [52][TOP] >UniRef100_A9T9D5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T9D5_PHYPA Length = 182 Score = 121 bits (303), Expect = 3e-26 Identities = 67/148 (45%), Positives = 88/148 (59%), Gaps = 7/148 (4%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKP----AVKAAPVAAPAQANQ---MMVWTPVN 172 M A A ++ S+A + +SV+ + LK A KA +++ ++ M VW P+ Sbjct: 10 MVAPAAFTAASSAASTSESASVKAFSGLKSNTLFASKAQSLSSVQNGSRVQCMQVWNPIG 69 Query: 173 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 352 FETFSYLPPLSD+ IA QV+Y++ G IPCLEF V+ + R + S YY Sbjct: 70 MTKFETFSYLPPLSDDSIAKQVEYMIQQGLIPCLEFD------VNADGVSRTNNSSPGYY 123 Query: 353 DNRYWTMWKLPMFGCRDPMQVLREIVAC 436 D RYWTMWKLPMFGC+D QVLREI C Sbjct: 124 DGRYWTMWKLPMFGCQDSSQVLREIEEC 151 [53][TOP] >UniRef100_Q41373 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Saccharum sp. RepID=RBS_SACHY Length = 168 Score = 121 bits (303), Expect = 3e-26 Identities = 60/135 (44%), Positives = 78/135 (57%) Frame = +2 Query: 23 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 202 V+A S+ +AA + +S+ A + A V+ + M VW NK FET SYL Sbjct: 5 VMASSATAAAPFQGLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64 Query: 203 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 382 PPL+ EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKL Sbjct: 65 PPLTQEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117 Query: 383 PMFGCRDPMQVLREI 427 PMFGC D QV +E+ Sbjct: 118 PMFGCTDASQVYKEL 132 [54][TOP] >UniRef100_A9U4X7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U4X7_PHYPA Length = 182 Score = 120 bits (302), Expect = 4e-26 Identities = 70/157 (44%), Positives = 88/157 (56%), Gaps = 16/157 (10%) Frame = +2 Query: 14 MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------ 148 MA+++A S+V S+AV+ SSV+ + LK A + A + Q Sbjct: 1 MASIVAASTVVAPAAFAAASSAVSTSEASSVKAFSGLKSATLFSSKAQTLSSVQNGSRVQ 60 Query: 149 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 325 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQNLIPCLEFD------VNANGVSR 114 Query: 326 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 + S YYD RYWTMWKLPMFGC+D QVLREI C Sbjct: 115 TNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEEC 151 [55][TOP] >UniRef100_A9S3R8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S3R8_PHYPA Length = 181 Score = 120 bits (302), Expect = 4e-26 Identities = 71/157 (45%), Positives = 87/157 (55%), Gaps = 16/157 (10%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS---------VRPMAALKPAV-------KAAPVAAPAQAN 145 MA+++A S+V A A A SS V+ + LK A + + V ++ N Sbjct: 1 MASIVAASTVVAPAAFAAASSGVSTSESTSVKAFSGLKSATLFSSQSQQLSSVQNGSRVN 60 Query: 146 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 325 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF S N S Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSKGVTRENNS--- 117 Query: 326 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 S YYD RYWTMWKLPMFGC+D QVLREI C Sbjct: 118 ----SPGYYDGRYWTMWKLPMFGCQDSAQVLREIEEC 150 [56][TOP] >UniRef100_C5Y519 Ribulose bisphosphate carboxylase small chain n=1 Tax=Sorghum bicolor RepID=C5Y519_SORBI Length = 169 Score = 120 bits (301), Expect = 5e-26 Identities = 59/135 (43%), Positives = 78/135 (57%) Frame = +2 Query: 23 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 202 V+A S+ + A + +S+ A + A V+ + M VW NK FET SYL Sbjct: 5 VMASSATAVAPFQGLKSTATLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64 Query: 203 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 382 PPL++EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKL Sbjct: 65 PPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117 Query: 383 PMFGCRDPMQVLREI 427 PMFGC D QV +E+ Sbjct: 118 PMFGCTDASQVYKEL 132 [57][TOP] >UniRef100_A9U380 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U380_PHYPA Length = 156 Score = 120 bits (301), Expect = 5e-26 Identities = 68/145 (46%), Positives = 85/145 (58%), Gaps = 7/145 (4%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKPAV-------KAAPVAAPAQANQMMVWTPVN 172 ++ +A SSV+A+ SSV+ + LK A + + V ++ M VW P+ Sbjct: 17 VSVTVASSSVAAS---RESSSVKAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIG 73 Query: 173 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 352 FETFSYLPPLSD+QIA QVDY++ IPC+EF +N S GS S YY Sbjct: 74 QPKFETFSYLPPLSDDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFS----GSGSSGYY 129 Query: 353 DNRYWTMWKLPMFGCRDPMQVLREI 427 D RYWTMWKLPMFGC D QVLREI Sbjct: 130 DGRYWTMWKLPMFGCTDSSQVLREI 154 [58][TOP] >UniRef100_A9TT85 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TT85_PHYPA Length = 183 Score = 120 bits (301), Expect = 5e-26 Identities = 71/156 (45%), Positives = 87/156 (55%), Gaps = 15/156 (9%) Frame = +2 Query: 14 MAAVIAKS---SVSAAVARPAR-----SSVRPMAALKPAVKAAPVAAPAQANQ------- 148 MA+ +A S VS A A PA +SV+ + LK A + A + Q Sbjct: 1 MASAVASSVVAPVSLAAASPAAVSRDSTSVKAFSGLKSATLFSSQAQTLSSVQNGSRVQC 60 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW P+ FETFSYLPPL+D++IA QVDY++ IPC+EF +N S Sbjct: 61 MQVWNPIGQPKFETFSYLPPLTDDEIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFS---- 116 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 G+ S YYD RYWTMWKLPMFGC D QVLREI C Sbjct: 117 GAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQEC 152 [59][TOP] >UniRef100_Q43832 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Spinacia oleracea RepID=RBS2_SPIOL Length = 180 Score = 120 bits (301), Expect = 5e-26 Identities = 71/153 (46%), Positives = 88/153 (57%), Gaps = 12/153 (7%) Frame = +2 Query: 14 MAAVIAKSSVSAAVAR-PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMV 157 MA+ + S+ A V+R PA++S V P LK PA K +N M V Sbjct: 1 MASSVLSSAAVATVSRTPAQASMVAPFTGLKSTVGFPATKKNDDITSLASNGGRVQCMKV 60 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W N K +ET SYLPPL+ +Q+A QVDY++ N W+PCLEF E+D +V E G Sbjct: 61 WPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEF-ETDHGFVYREHHNSPG-- 117 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC DP QVL E+ C Sbjct: 118 ---YYDGRYWTMWKLPMFGCTDPAQVLNELEEC 147 [60][TOP] >UniRef100_A9U4X8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U4X8_PHYPA Length = 182 Score = 120 bits (300), Expect = 6e-26 Identities = 70/157 (44%), Positives = 87/157 (55%), Gaps = 16/157 (10%) Frame = +2 Query: 14 MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------ 148 MA+++A S+V S+AV SSV+ + LK A + A + Q Sbjct: 1 MASIVAASTVVAPAAFAAASSAVMTSEASSVKAFSGLKSATLFSSKAQTLSSVQNGSRVQ 60 Query: 149 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 325 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQNLIPCLEFD------VNANGVSR 114 Query: 326 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 + S YYD RYWTMWKLPMFGC+D QVLREI C Sbjct: 115 TNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEEC 151 [61][TOP] >UniRef100_O20253 Ribulose bisphosphate carboxylase small chain n=1 Tax=Spinacia oleracea RepID=O20253_SPIOL Length = 180 Score = 119 bits (298), Expect = 1e-25 Identities = 71/153 (46%), Positives = 88/153 (57%), Gaps = 12/153 (7%) Frame = +2 Query: 14 MAAVIAKSSVSAAVAR-PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMV 157 MA+ + S+ A V+R PA++S V P LK PA K +N M V Sbjct: 1 MASSVLSSARVATVSRTPAQASMVAPFTGLKSTVGFPATKKNDDITSLASNGGRVQCMKV 60 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W N K +ET SYLPPL+ +Q+A QVDY++ N W+PCLEF E+D +V E G Sbjct: 61 WPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEF-ETDHGFVYREHHNSPG-- 117 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC DP QVL E+ C Sbjct: 118 ---YYDGRYWTMWKLPMFGCTDPAQVLNELEEC 147 [62][TOP] >UniRef100_B6RHQ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Miscanthus x giganteus RepID=B6RHQ4_9POAL Length = 169 Score = 119 bits (297), Expect = 1e-25 Identities = 59/134 (44%), Positives = 77/134 (57%) Frame = +2 Query: 23 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 202 V+A S+ + A + +S+ A + A V+ + M VW NK FET SYL Sbjct: 5 VMASSATAVAPFQWLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64 Query: 203 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 382 PPL++EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKL Sbjct: 65 PPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117 Query: 383 PMFGCRDPMQVLRE 424 PMFGC D QV +E Sbjct: 118 PMFGCTDASQVYKE 131 [63][TOP] >UniRef100_A9SRS0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SRS0_PHYPA Length = 182 Score = 119 bits (297), Expect = 1e-25 Identities = 70/157 (44%), Positives = 87/157 (55%), Gaps = 16/157 (10%) Frame = +2 Query: 14 MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------ 148 MA++IA SSV S+AV+ +SV+ + LK + A + Q Sbjct: 1 MASIIAASSVVAPAALSAASSAVSTSESTSVKAFSGLKSTTLFSSKAQTLSSVQNGSRVQ 60 Query: 149 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 325 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFD------VNANGVSR 114 Query: 326 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 + S YYD RYWTMWKLPMFGC+D QVLREI C Sbjct: 115 ANNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEEC 151 [64][TOP] >UniRef100_P08706 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Solanum lycopersicum RepID=RBS1_SOLLC Length = 181 Score = 119 bits (297), Expect = 1e-25 Identities = 63/151 (41%), Positives = 88/151 (58%), Gaps = 13/151 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVK------------AAPVAAPAQANQMM 154 MA+ I S+ +A + A++S V P LK A + + + M Sbjct: 1 MASSIVSSAAAATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQ 60 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E+++ +V E+ G Sbjct: 61 VWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETERGFVYRENNSSPG- 118 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QVL E+ Sbjct: 119 ----YYDGRYWTMWKLPMFGCTDATQVLAEV 145 [65][TOP] >UniRef100_A9RG04 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RG04_PHYPA Length = 184 Score = 118 bits (296), Expect = 2e-25 Identities = 69/159 (43%), Positives = 88/159 (55%), Gaps = 18/159 (11%) Frame = +2 Query: 14 MAAVIAKSSV-----------SAAVARPARSSVRPMAALKP-------AVKAAPVAAPAQ 139 MA+V+A SS S+ V+ +SV+ + LK A K + V ++ Sbjct: 1 MASVVAASSAVAPAAAFVAASSSGVSTSEATSVKAFSGLKSTTLFSGNARKLSSVQNGSR 60 Query: 140 ANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESA 319 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V++ Sbjct: 61 VQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFD------VNSNGV 114 Query: 320 IRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 R + S YYD RYWTMWKLPMFGC+D QVLREI C Sbjct: 115 SRVNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEEC 153 [66][TOP] >UniRef100_A9RJ57 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJ57_PHYPA Length = 181 Score = 118 bits (295), Expect = 2e-25 Identities = 70/157 (44%), Positives = 89/157 (56%), Gaps = 16/157 (10%) Frame = +2 Query: 14 MAAVIAKSSVSA----AVARPARSS-----VRPMAALKPAV-------KAAPVAAPAQAN 145 MA+ +A S+V A A A PA S+ V+ + LK A ++ V ++ Sbjct: 1 MASTVAASAVVAPTAFAAASPAASTSGSTTVKAFSGLKSATVFSGKAQNSSSVQNGSRVQ 60 Query: 146 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 325 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF ++ +N S Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNANGVSRTNNS--- 117 Query: 326 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 S YYD RYWTMWKLPMFGC+D QVLREI C Sbjct: 118 ----SPGYYDGRYWTMWKLPMFGCQDSAQVLREIEEC 150 [67][TOP] >UniRef100_A7Q6D7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Vitis vinifera RepID=A7Q6D7_VITVI Length = 169 Score = 118 bits (295), Expect = 2e-25 Identities = 54/105 (51%), Positives = 66/105 (62%) Frame = +2 Query: 122 VAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAY 301 V+ ++ + M W P+NNK FET SYLPPLSD+ IA ++DY++ GWIPCLEF E + Sbjct: 39 VSNGSKTHCMKTWNPINNKKFETLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEVGYVF 98 Query: 302 VSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 N YYD RYWT+WKLPMFGC D QVL EI C Sbjct: 99 RKNSQIPG-------YYDGRYWTLWKLPMFGCNDASQVLNEIHEC 136 [68][TOP] >UniRef100_A9U377 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U377_PHYPA Length = 182 Score = 117 bits (294), Expect = 3e-25 Identities = 69/157 (43%), Positives = 86/157 (54%), Gaps = 16/157 (10%) Frame = +2 Query: 14 MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------ 148 MA+V+A S++ SA+V +SV+ + LK A A + Q Sbjct: 1 MASVVAASTIVAPAAFAAASASVGSADSTSVKAFSGLKSATLFTSKAQTLSSVQNRSRVQ 60 Query: 149 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 325 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFD------VNANGVSR 114 Query: 326 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 + S YYD RYWTMWKLPMFGC+D QVLREI C Sbjct: 115 TNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEEC 151 [69][TOP] >UniRef100_A9TWU8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TWU8_PHYPA Length = 183 Score = 117 bits (294), Expect = 3e-25 Identities = 66/148 (44%), Positives = 84/148 (56%), Gaps = 7/148 (4%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKP-------AVKAAPVAAPAQANQMMVWTPVN 172 + A A ++ S+AV+ SSV+ + LK A + V ++ M VW P+ Sbjct: 12 VVAPTAFAAASSAVSTSESSSVKAFSGLKSNTLFSSKAQTLSSVQNGSRVQCMQVWNPIG 71 Query: 173 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 352 FETFSYLPPLSD+ IA QV+Y++ IPCLEF ++ +N S S YY Sbjct: 72 MTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNANGVSRTNNS-------SPGYY 124 Query: 353 DNRYWTMWKLPMFGCRDPMQVLREIVAC 436 D RYWTMWKLPMFGC D QVLREI C Sbjct: 125 DGRYWTMWKLPMFGCNDSAQVLREIEEC 152 [70][TOP] >UniRef100_A9T3X7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T3X7_PHYPA Length = 179 Score = 117 bits (294), Expect = 3e-25 Identities = 69/153 (45%), Positives = 85/153 (55%), Gaps = 12/153 (7%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPAR-----SSVRPMAALKPAVKAAPVAAP-------AQANQMMV 157 MA+ + S+ AA A PA SSV+ + LK +A A ++ M V Sbjct: 1 MASAVVSVSIVAA-ASPASVCRESSSVKQFSGLKSTTLSASKARRLSSVHNGSRVQCMQV 59 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W P+ FETFSYLPPL+D+QIA QVD+++ IPC+EF +N S G Sbjct: 60 WNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFS----GPG 115 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 S YYD RYWTMWKLPMFGC D QVLREI C Sbjct: 116 SSGYYDGRYWTMWKLPMFGCTDSAQVLREIQEC 148 [71][TOP] >UniRef100_A9T3W5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T3W5_PHYPA Length = 179 Score = 117 bits (294), Expect = 3e-25 Identities = 67/152 (44%), Positives = 85/152 (55%), Gaps = 11/152 (7%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPA----RSSVRPMAALKP-------AVKAAPVAAPAQANQMMVW 160 MA+ + S+ AA + A SSV+ + LK A + + V ++ M VW Sbjct: 1 MASAVVSVSIVAAASPAAVCRESSSVKQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVW 60 Query: 161 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 340 P+ FETFSYLPPL+D+QIA QVD+++ IPC+EF +N S G S Sbjct: 61 NPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFS----GPGS 116 Query: 341 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D QVLREI C Sbjct: 117 SGYYDGRYWTMWKLPMFGCTDSAQVLREIQEC 148 [72][TOP] >UniRef100_O64416 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Marchantia paleacea RepID=RBS_MARPA Length = 180 Score = 117 bits (294), Expect = 3e-25 Identities = 63/147 (42%), Positives = 78/147 (53%), Gaps = 7/147 (4%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSSVRPMAALKPAV-------KAAPVAAPAQANQMMVWTPVNN 175 AAV+ + SAA + V A LK V + ++ + M VW P NN Sbjct: 8 AAVVTPFAASAASTTKSSQIVSVQAGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNN 67 Query: 176 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 355 FET SYLPPLS + +A Q+DY++ +GW PC+EF + R GS YYD Sbjct: 68 LKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQG-------TVTREGSTMPGYYD 120 Query: 356 NRYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLPMFGC D VLREI C Sbjct: 121 GRYWTMWKLPMFGCTDSASVLREIEEC 147 [73][TOP] >UniRef100_P19309 Ribulose bisphosphate carboxylase small chain SSU40A, chloroplastic n=1 Tax=Lemna gibba RepID=RBS3_LEMGI Length = 177 Score = 117 bits (294), Expect = 3e-25 Identities = 66/147 (44%), Positives = 84/147 (57%), Gaps = 16/147 (10%) Frame = +2 Query: 35 SSVSAAVAR--PARSSVRPMAALKPAVKAAPVAAPAQANQ--------------MMVWTP 166 +S +AAVAR PA+SS+ P A + +V P A +AN M VW P Sbjct: 7 ASTAAAVARAGPAQSSMVPFNACRSSV---PFPATRKANNNLSTLPGNGGRVSCMQVWPP 63 Query: 167 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 346 K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + S Sbjct: 64 EGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA-------SPG 116 Query: 347 YYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QV+ E+ Sbjct: 117 YYDGRYWTMWKLPMFGCTDASQVIAEV 143 [74][TOP] >UniRef100_Q43110 Ribulose bisphosphate carboxylase small chain n=1 Tax=Pteris vittata RepID=Q43110_PTEVI Length = 174 Score = 117 bits (293), Expect = 4e-25 Identities = 67/149 (44%), Positives = 82/149 (55%), Gaps = 8/149 (5%) Frame = +2 Query: 14 MAAVIAKSSVSA-AVARPARSSVRPMAALKPAVKAAPVAAPAQA-------NQMMVWTPV 169 MA ++A +VSA + A A S + + LK AP A A + M+VW P Sbjct: 1 MATMLAAMAVSAPSCAAAAESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPY 60 Query: 170 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 349 +NK FET SYLPPL+++QIA QV+Y+V GW PC+EF Y R Y Sbjct: 61 DNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGSVY-------REHFHGSGY 113 Query: 350 YDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YD RYW MWKLPMFGC D VLREI C Sbjct: 114 YDGRYWIMWKLPMFGCTDSGSVLREIAEC 142 [75][TOP] >UniRef100_Q3LFQ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Panax ginseng RepID=Q3LFQ4_PANGI Length = 183 Score = 117 bits (292), Expect = 5e-25 Identities = 69/155 (44%), Positives = 92/155 (59%), Gaps = 14/155 (9%) Frame = +2 Query: 14 MAAVIAKSSVSAAVAR--PARSS-VRPMAALKPAVKAAPV--------AAPAQANQ---M 151 MA+ + S+ AAV+R PA++S V P LK + A PV + P+ + M Sbjct: 1 MASSVISSATVAAVSRAVPAQASMVAPFTGLK-STAAFPVTRKVNDITSLPSNGGRVQCM 59 Query: 152 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 331 VW P+ K FET SYLP L+ EQ++ +VDY++ +GW+PCLEF E + +V E G Sbjct: 60 KVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEF-ELEHGFVYREHHHSPG 118 Query: 332 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D QVL+E+ C Sbjct: 119 -----YYDGRYWTMWKLPMFGCTDSSQVLKEVEEC 148 [76][TOP] >UniRef100_A9S8M6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S8M6_PHYPA Length = 182 Score = 117 bits (292), Expect = 5e-25 Identities = 69/158 (43%), Positives = 86/158 (54%), Gaps = 17/158 (10%) Frame = +2 Query: 14 MAAVIAKSSV----------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ----- 148 MA+V+A SS S+ V+ +SV+ + LK A + A + Q Sbjct: 1 MASVVAASSAVAPAAAFGAASSGVSTSEATSVKAFSGLKSATLFSGNAQTLSSVQNGSRV 60 Query: 149 --MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAI 322 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF S+ Sbjct: 61 QCMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSN-------GVS 113 Query: 323 RFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 R + S YYD RYWTMWKLPMFGC+D QVLREI C Sbjct: 114 RVNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEEC 151 [77][TOP] >UniRef100_P07179 Ribulose bisphosphate carboxylase small chain 2A, chloroplastic n=1 Tax=Solanum lycopersicum RepID=RBS2A_SOLLC Length = 180 Score = 117 bits (292), Expect = 5e-25 Identities = 65/151 (43%), Positives = 88/151 (58%), Gaps = 11/151 (7%) Frame = +2 Query: 8 LKMAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ------MM 154 + AAV +S+V+ A S V P LK P K + + A+ M Sbjct: 6 ISSAAVATRSNVTQA------SMVAPFTGLKSSATFPVTKKQNLDITSIASNGGRVSCMQ 59 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E++ +V E+ + Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYREN-----N 113 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 S YYD RYWTMWKLPMFGC D QVL E+ Sbjct: 114 KSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 144 [78][TOP] >UniRef100_A9YTZ8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Solanum tuberosum RepID=A9YTZ8_SOLTU Length = 181 Score = 116 bits (291), Expect = 7e-25 Identities = 62/149 (41%), Positives = 87/149 (58%), Gaps = 6/149 (4%) Frame = +2 Query: 8 LKMAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------MMVWTPV 169 + AAV +++V+ A + A + AA P + + + A+ M VW P+ Sbjct: 6 ISSAAVATRTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPI 65 Query: 170 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 349 N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ +V E+ G Y Sbjct: 66 NTKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSPG-----Y 119 Query: 350 YDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YD RYWTMWKLPMFGC D QVL E+ C Sbjct: 120 YDGRYWTMWKLPMFGCTDATQVLAEVQEC 148 [79][TOP] >UniRef100_A9S8M9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S8M9_PHYPA Length = 182 Score = 116 bits (291), Expect = 7e-25 Identities = 69/158 (43%), Positives = 85/158 (53%), Gaps = 17/158 (10%) Frame = +2 Query: 14 MAAVIAKSSV----------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ----- 148 MA V+A SS S+ V+ +SV+ + LK A + A + Q Sbjct: 1 MATVVAASSAVAPAAAFGAASSGVSTSEATSVKAFSGLKSATLFSGNAQTLSSVQNGSRV 60 Query: 149 --MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAI 322 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF S+ Sbjct: 61 QCMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSN-------GVS 113 Query: 323 RFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 R + S YYD RYWTMWKLPMFGC+D QVLREI C Sbjct: 114 RVNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEEC 151 [80][TOP] >UniRef100_B9S5G3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ricinus communis RepID=B9S5G3_RICCO Length = 181 Score = 116 bits (290), Expect = 9e-25 Identities = 66/144 (45%), Positives = 84/144 (58%), Gaps = 13/144 (9%) Frame = +2 Query: 35 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNN 175 SS S + + PA+++ V P LK A + PV A + M VW P+ Sbjct: 7 SSASVSRSSPAQATMVAPFTGLKSAA-SFPVTRKANNDITSIASNGGRVQCMQVWPPLGK 65 Query: 176 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 355 K FET SYLP L+DEQ+A +VDY++ GWIPCLEF E + +V E+ G YYD Sbjct: 66 KKFETLSYLPDLTDEQLAKEVDYLLRKGWIPCLEF-ELEHGFVYRENHRSPG-----YYD 119 Query: 356 NRYWTMWKLPMFGCRDPMQVLREI 427 RYWTMWKLPMFGC D QVL+E+ Sbjct: 120 GRYWTMWKLPMFGCSDSTQVLKEL 143 [81][TOP] >UniRef100_A9PI67 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa RepID=A9PI67_POPTR Length = 170 Score = 116 bits (290), Expect = 9e-25 Identities = 61/138 (44%), Positives = 77/138 (55%), Gaps = 7/138 (5%) Frame = +2 Query: 44 SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ-------MMVWTPVNNKMFETFSYL 202 ++AVA P +R + +P VA ++ M W P+NNK FE SYL Sbjct: 8 ASAVAAPGYHGLRALPTKQPFATKNSVARSSRTVSNGSKTFCMKTWNPINNKKFEALSYL 67 Query: 203 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 382 PPLS++ IA ++DY++ GWIPCLEF E V E + G YYD RYWT+WKL Sbjct: 68 PPLSEDSIAKEIDYMMKKGWIPCLEFDEVGS--VRREHSRMPG-----YYDGRYWTLWKL 120 Query: 383 PMFGCRDPMQVLREIVAC 436 PMFGC D QVL EI C Sbjct: 121 PMFGCTDSSQVLEEIHEC 138 [82][TOP] >UniRef100_P26576 Ribulose bisphosphate carboxylase small chain 2B, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBSB_SOLTU Length = 180 Score = 116 bits (290), Expect = 9e-25 Identities = 66/151 (43%), Positives = 88/151 (58%), Gaps = 13/151 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP------------AQANQMM 154 MA+ I S+ A A A++S V P LK + + PV+ + M Sbjct: 1 MASSIVSSAAVATRANGAQASMVGPFTGLK-STASFPVSRKQNLDITSIASNGGRVRCMQ 59 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+ + Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYREN-----N 113 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 S YYD RYWTMWKLPMFGC D QVL E+ Sbjct: 114 KSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 144 [83][TOP] >UniRef100_Q04450 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS2_MESCR Length = 180 Score = 116 bits (290), Expect = 9e-25 Identities = 63/149 (42%), Positives = 82/149 (55%), Gaps = 11/149 (7%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPA-----------QANQMMVW 160 MA++++ ++V S V P LK +V A PV + + M VW Sbjct: 1 MASMMSNAAVVGRTTPAQASMVAPFTGLK-SVSAFPVTKKSNDITSIASNGGRVQCMQVW 59 Query: 161 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 340 P+ K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G Sbjct: 60 PPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG--- 115 Query: 341 CLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC DP QV+ E+ Sbjct: 116 --YYDGRYWTMWKLPMFGCTDPSQVVAEL 142 [84][TOP] >UniRef100_A9YTZ7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Solanum tuberosum RepID=A9YTZ7_SOLTU Length = 181 Score = 115 bits (289), Expect = 1e-24 Identities = 62/149 (41%), Positives = 87/149 (58%), Gaps = 6/149 (4%) Frame = +2 Query: 8 LKMAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------MMVWTPV 169 + AAV +++V+ A + A + AA P + + + A+ M VW P+ Sbjct: 6 ISSAAVATRTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPI 65 Query: 170 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 349 N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ +V E+ G Y Sbjct: 66 NMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSPG-----Y 119 Query: 350 YDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YD RYWTMWKLPMFGC D QVL E+ C Sbjct: 120 YDGRYWTMWKLPMFGCTDTTQVLAEVQEC 148 [85][TOP] >UniRef100_P05348 Ribulose bisphosphate carboxylase small chain, chloroplastic n=2 Tax=Zea mays RepID=RBS_MAIZE Length = 170 Score = 115 bits (289), Expect = 1e-24 Identities = 58/135 (42%), Positives = 77/135 (57%) Frame = +2 Query: 23 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 202 ++A S+ + A + +S+ A + + V+ + M VW NK FET SYL Sbjct: 6 MMASSATAVAPFQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYL 65 Query: 203 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 382 PPLS + + QVDY++ NGWIPCLEF++ Y N S S YYD RYWTMWKL Sbjct: 66 PPLSTDDLLKQVDYLLRNGWIPCLEFSKVGFVYREN-------STSPCYYDGRYWTMWKL 118 Query: 383 PMFGCRDPMQVLREI 427 PMFGC D QV +E+ Sbjct: 119 PMFGCNDATQVYKEL 133 [86][TOP] >UniRef100_P32764 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBS3_SOLTU Length = 181 Score = 115 bits (289), Expect = 1e-24 Identities = 64/151 (42%), Positives = 85/151 (56%), Gaps = 13/151 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVK------------AAPVAAPAQANQMM 154 MA+ I S+ A + A++S V P LK A + + + M Sbjct: 1 MASSIVSSAAVATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQ 60 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+ G Sbjct: 61 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSPG- 118 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QVL E+ Sbjct: 119 ----YYDGRYWTMWKLPMFGCTDATQVLAEV 145 [87][TOP] >UniRef100_P05349 Ribulose bisphosphate carboxylase small chain 3B, chloroplastic n=1 Tax=Solanum lycopersicum RepID=RBS3B_SOLLC Length = 180 Score = 115 bits (289), Expect = 1e-24 Identities = 64/151 (42%), Positives = 88/151 (58%), Gaps = 13/151 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP------------AQANQMM 154 MA+ I S+ A A++S V P LK + + PV+ + + M Sbjct: 1 MASSIVSSAAVATRGNGAQASMVAPFTGLK-STASFPVSRKQNLDITSIASNGGRVSCMQ 59 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E++ +V E+ G Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYRENHKSPG- 117 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QVL E+ Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDATQVLAEV 144 [88][TOP] >UniRef100_P26574 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBS1_SOLTU Length = 181 Score = 115 bits (289), Expect = 1e-24 Identities = 62/149 (41%), Positives = 87/149 (58%), Gaps = 6/149 (4%) Frame = +2 Query: 8 LKMAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------MMVWTPV 169 + AAV +++V+ A + A + AA P + + + A+ M VW P+ Sbjct: 6 ISSAAVATRTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPI 65 Query: 170 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 349 N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ +V E+ G Y Sbjct: 66 NMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSPG-----Y 119 Query: 350 YDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YD RYWTMWKLPMFGC D QVL E+ C Sbjct: 120 YDGRYWTMWKLPMFGCTDATQVLAEVQEC 148 [89][TOP] >UniRef100_P10795 Ribulose bisphosphate carboxylase small chain 1A, chloroplastic n=2 Tax=Arabidopsis thaliana RepID=RBS1A_ARATH Length = 180 Score = 115 bits (289), Expect = 1e-24 Identities = 66/151 (43%), Positives = 88/151 (58%), Gaps = 14/151 (9%) Frame = +2 Query: 26 IAKSSVSAA--VARPARSS-VRPMAALK-----PAVKAAP------VAAPAQANQMMVWT 163 +A S +S+A VA PA+++ V P LK PA + A + + N M VW Sbjct: 1 MASSMLSSATMVASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWP 60 Query: 164 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 343 P+ K FET SYLP L+D ++A +VDY++ N WIPC+EF E + +V E G Sbjct: 61 PIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEF-ELEHGFVYREHGNSPG---- 115 Query: 344 LYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLP+FGC D QVL+E+ C Sbjct: 116 -YYDGRYWTMWKLPLFGCTDSAQVLKEVEEC 145 [90][TOP] >UniRef100_A0FIP7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Camellia sinensis RepID=A0FIP7_CAMSI Length = 176 Score = 115 bits (288), Expect = 2e-24 Identities = 65/150 (43%), Positives = 83/150 (55%), Gaps = 13/150 (8%) Frame = +2 Query: 26 IAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAP------------AQANQMMVWTP 166 +A S +S+AV PA++S+ P LK + A PV + M VW P Sbjct: 1 MAASIISSAVVAPAQASMAAPFTGLK-STSAFPVTRKLDTDITSLASNGGRVQCMKVWPP 59 Query: 167 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 346 + K FET SYLPPL+ Q+ +VDY++ GWIPCLEF+ V R + S Sbjct: 60 LGLKKFETLSYLPPLTQAQLGKEVDYLIRLGWIPCLEFS------VQGGFVYREHNKSPG 113 Query: 347 YYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D QVL+E+ C Sbjct: 114 YYDGRYWTMWKLPMFGCTDSSQVLKEVEEC 143 [91][TOP] >UniRef100_O65194 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Medicago sativa RepID=RBS_MEDSA Length = 180 Score = 115 bits (288), Expect = 2e-24 Identities = 53/100 (53%), Positives = 68/100 (68%) Frame = +2 Query: 137 QANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNES 316 + N M VW PV K FET SYLPPL++EQ+A +V+Y++ GWIPCLEF E +K +V E+ Sbjct: 54 RVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEF-ELEKGFVYREN 112 Query: 317 AIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 G YYD RYWTMW+LP+FG D QVL+E+ C Sbjct: 113 HRSPG-----YYDGRYWTMWRLPLFGATDSSQVLKELADC 147 [92][TOP] >UniRef100_P26575 Ribulose bisphosphate carboxylase small chain 2A, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBSA_SOLTU Length = 180 Score = 115 bits (288), Expect = 2e-24 Identities = 65/151 (43%), Positives = 87/151 (57%), Gaps = 13/151 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP------------AQANQMM 154 MA+ + S+ A A++S V P LK A + PV+ + M Sbjct: 1 MASSVMSSAAVATRGNGAQASMVAPFTGLKSAA-SFPVSRKQNLDITSIASNGGRVRCMQ 59 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+ + Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYREN-----N 113 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 S YYD RYWTMWKLPMFGC D QVL E+ Sbjct: 114 KSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 144 [93][TOP] >UniRef100_P19310 Ribulose bisphosphate carboxylase small chain SSU40B, chloroplastic n=1 Tax=Lemna gibba RepID=RBS4_LEMGI Length = 177 Score = 115 bits (288), Expect = 2e-24 Identities = 64/147 (43%), Positives = 84/147 (57%), Gaps = 16/147 (10%) Frame = +2 Query: 35 SSVSAAVAR--PARSSVRPMAALKPAVKAAPVAAPAQANQ--------------MMVWTP 166 +S +AAVAR PA++++ P A + +V P A +AN M VW P Sbjct: 7 ASTAAAVARAGPAQTNMVPFNACRSSV---PFPATRKANNDLSTLPSNGGRVSCMQVWPP 63 Query: 167 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 346 K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + S Sbjct: 64 EGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA-------SPG 116 Query: 347 YYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QV+ E+ Sbjct: 117 YYDGRYWTMWKLPMFGCTDASQVIAEV 143 [94][TOP] >UniRef100_Q9XGX4 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Amaranthus hypochondriacus RepID=RBS3_AMAHP Length = 180 Score = 115 bits (288), Expect = 2e-24 Identities = 62/142 (43%), Positives = 83/142 (58%), Gaps = 4/142 (2%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPA----QANQMMVWTPVNNKM 181 + AV+ S A + P + ++ +A+ K+ + + A + M VW PV K Sbjct: 10 ITAVVGASGAQANMVAPF-NGLKSIASFPVTRKSNDITSIASNGGRVQCMQVWPPVGKKK 68 Query: 182 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 361 FET SYLPPLSD Q+ AQV Y++ NGWIPC+EF E + +V E+ G Y D R Sbjct: 69 FETLSYLPPLSDAQLLAQVQYLLNNGWIPCIEF-ELEHPFVYRENHRSPG-----YQDGR 122 Query: 362 YWTMWKLPMFGCRDPMQVLREI 427 YWTMWKLPM+GC DP QVL E+ Sbjct: 123 YWTMWKLPMYGCTDPAQVLNEV 144 [95][TOP] >UniRef100_P69250 Ribulose bisphosphate carboxylase small chain, chloroplastic n=2 Tax=Nicotiana RepID=RBS1_NICSY Length = 180 Score = 115 bits (288), Expect = 2e-24 Identities = 65/152 (42%), Positives = 87/152 (57%), Gaps = 12/152 (7%) Frame = +2 Query: 8 LKMAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQM 151 L AAV +S+V+ A + V P LK A + PV+ + M Sbjct: 6 LSSAAVATRSNVAQA------NMVAPFTGLKSAA-SFPVSRKQNLDITSIASNGGRVQCM 58 Query: 152 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 331 VW P+N K +ET SYLP LS EQ+ ++V+Y++ NGW+PCLEF E++ +V E+ Sbjct: 59 QVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEF-ETEHGFVYREN----- 112 Query: 332 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 + S YYD RYWTMWKLPMFGC D QVL E+ Sbjct: 113 NKSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 144 [96][TOP] >UniRef100_P16032 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS1_MESCR Length = 182 Score = 115 bits (288), Expect = 2e-24 Identities = 68/151 (45%), Positives = 85/151 (56%), Gaps = 13/151 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVAR-PARSS-VRPMAALKPAVKAAPVAAP-----------AQANQMM 154 MA+ + S+ A V R PA++S V P LK +V A PV + M Sbjct: 1 MASSMVSSAAVATVNRTPAQASMVAPFNGLK-SVAAFPVTKKNNDITSVATNGGRVQCMQ 59 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P+ K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G Sbjct: 60 VWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG- 117 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC DP QV+ E+ Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDPSQVVAEL 144 [97][TOP] >UniRef100_O24574 Ribulose bisphosphate carboxylase small chain n=1 Tax=Zea mays RepID=O24574_MAIZE Length = 170 Score = 115 bits (287), Expect = 2e-24 Identities = 58/135 (42%), Positives = 76/135 (56%) Frame = +2 Query: 23 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 202 ++A S+ + A + +S+ A + V+ + M VW NK FET SYL Sbjct: 6 MMASSATAVAPFQGLKSAASLPVARRSTRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYL 65 Query: 203 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 382 PPLS + + QVDY++ NGWIPCLEF++ Y N S S YYD RYWTMWKL Sbjct: 66 PPLSTDDLLKQVDYLLRNGWIPCLEFSKLGFVYREN-------STSPCYYDGRYWTMWKL 118 Query: 383 PMFGCRDPMQVLREI 427 PMFGC D QV +E+ Sbjct: 119 PMFGCTDATQVYKEL 133 [98][TOP] >UniRef100_C6T529 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=C6T529_SOYBN Length = 172 Score = 115 bits (287), Expect = 2e-24 Identities = 53/96 (55%), Positives = 60/96 (62%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M W P+NNK FET SYLPPLSDE IA ++DY++ GWIPCLEF E N Sbjct: 48 MKTWNPINNKKFETLSYLPPLSDESIAKEIDYMLKKGWIPCLEFDELGCVRRENSHMPE- 106 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWT+WKLPMF C D QVL+EI C Sbjct: 107 ------YYDGRYWTLWKLPMFACSDSSQVLKEIHEC 136 [99][TOP] >UniRef100_Q08185 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS5_MESCR Length = 182 Score = 115 bits (287), Expect = 2e-24 Identities = 63/143 (44%), Positives = 81/143 (56%), Gaps = 10/143 (6%) Frame = +2 Query: 29 AKSSVSAAVARPARSSVRPMAALKPAVKAAPV----------AAPAQANQMMVWTPVNNK 178 A ++++AA + V P LK ++ A PV A+ Q MVW P+ K Sbjct: 9 AATTMAAATTTAQANMVAPFNGLK-SISAFPVTRKNNDITSVASNGGRVQCMVWPPLGMK 67 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G YYD Sbjct: 68 KFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG-----YYDG 121 Query: 359 RYWTMWKLPMFGCRDPMQVLREI 427 RYWTMWKLPMFGC DP QV+ E+ Sbjct: 122 RYWTMWKLPMFGCTDPSQVVAEL 144 [100][TOP] >UniRef100_P07180 Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic n=1 Tax=Solanum lycopersicum RepID=RBS3A_SOLLC Length = 180 Score = 115 bits (287), Expect = 2e-24 Identities = 63/151 (41%), Positives = 88/151 (58%), Gaps = 13/151 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP------------AQANQMM 154 MA+ + S+ A A++S V P LK + + PV+ + + M Sbjct: 1 MASSVMSSAAVATRGNGAQASMVAPFTGLK-STASFPVSRKQNLDITSIASNGGRVSCMQ 59 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E++ +V E+ G Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYRENHKSPG- 117 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QVL E+ Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDATQVLAEV 144 [101][TOP] >UniRef100_P19308 Ribulose bisphosphate carboxylase small chain SSU26, chloroplastic n=1 Tax=Lemna gibba RepID=RBS2_LEMGI Length = 177 Score = 115 bits (287), Expect = 2e-24 Identities = 65/151 (43%), Positives = 84/151 (55%), Gaps = 13/151 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MM 154 MA+ + S+ + A A PA+S+ V P L+ +V A P A N M Sbjct: 1 MASSMMASTAAVARAGPAQSNMVAPFNGLRSSV-AFPATRKANKNLSTLPSNGGKVSCMQ 59 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + Sbjct: 60 VWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA------ 113 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 S YYD RYWTMWKLPMFGC D QV+ E+ Sbjct: 114 -SPGYYDGRYWTMWKLPMFGCTDASQVIAEV 143 [102][TOP] >UniRef100_P10647 Ribulose bisphosphate carboxylase small chain C, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBS0_SOLTU Length = 181 Score = 115 bits (287), Expect = 2e-24 Identities = 64/151 (42%), Positives = 84/151 (55%), Gaps = 13/151 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVK------------AAPVAAPAQANQMM 154 MA+ I S+ A + A++S V P LK A + + + M Sbjct: 1 MASSIVSSAAVATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQ 60 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E G Sbjct: 61 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYREHNSSPG- 118 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QVL E+ Sbjct: 119 ----YYDGRYWTMWKLPMFGCTDGTQVLAEV 145 [103][TOP] >UniRef100_Q84NG4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Flaveria bidentis RepID=Q84NG4_FLABI Length = 173 Score = 114 bits (286), Expect = 3e-24 Identities = 65/146 (44%), Positives = 84/146 (57%), Gaps = 12/146 (8%) Frame = +2 Query: 35 SSVSAAVAR-PARSSVRPMAALKPAVKAAPVAA--------PAQANQ---MMVWTPVNNK 178 +S+ A VA P + V P LK A A PV P+ + M VW PV K Sbjct: 2 ASIPATVAAVPQTNMVAPFTGLK-ANAAFPVTKKVNGFSTLPSNGGRVQCMKVWPPVGKK 60 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD Sbjct: 61 KYETLSYLPELTEAQLAKEVDYLIRNKWVPCLEF-ELEHGFVYRENASSPG-----YYDG 114 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLPMFGC D QV++E+ C Sbjct: 115 RYWTMWKLPMFGCTDSAQVMKELQEC 140 [104][TOP] >UniRef100_Q96542 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Betula pendula RepID=RBS_BETVE Length = 182 Score = 114 bits (286), Expect = 3e-24 Identities = 71/156 (45%), Positives = 86/156 (55%), Gaps = 15/156 (9%) Frame = +2 Query: 14 MAAVIAKSSVSAAVAR--PARSS-VRPMAALKPAVKAAPVAAPA------------QANQ 148 MA + S+ AAV+R PA+SS V P LK + A PV + Sbjct: 1 MACSMISSATVAAVSRASPAQSSMVAPFTCLK-STSAFPVTQKTNNDITSIASNGGRVQC 59 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW P+ K FET SYLPPLS EQ+A +VDY++ IPCLEF E + +V E Sbjct: 60 MQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEF-ELEHGFVYREHNRSP 118 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 G YYD RYWTMWKLPMFGC D QVL+E+ C Sbjct: 119 G-----YYDGRYWTMWKLPMFGCNDSSQVLKELEEC 149 [105][TOP] >UniRef100_P19311 Ribulose bisphosphate carboxylase small chain SSU5A, chloroplastic n=1 Tax=Lemna gibba RepID=RBS5_LEMGI Length = 177 Score = 114 bits (286), Expect = 3e-24 Identities = 65/151 (43%), Positives = 85/151 (56%), Gaps = 13/151 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMM 154 MA+ + S+ + A A PA+SS V P L+ +V A P A + + M Sbjct: 1 MASSMMASTAAVARAGPAQSSMVAPFNGLRSSV-AFPATRKANNDLSTLPSNGGRVSCMQ 59 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + Sbjct: 60 VWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA------ 113 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 S YYD RYWTMWKLPMFGC D QV+ E+ Sbjct: 114 -SPGYYDGRYWTMWKLPMFGCTDASQVIAEV 143 [106][TOP] >UniRef100_P22433 Ribulose bisphosphate carboxylase small chain S41, chloroplastic n=1 Tax=Nicotiana sylvestris RepID=RBS2_NICSY Length = 181 Score = 114 bits (286), Expect = 3e-24 Identities = 64/152 (42%), Positives = 86/152 (56%), Gaps = 14/152 (9%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPAR--SSVRPMAALKPAVKAAPVAAP------------AQANQM 151 MA +I S+ + A A S + P LK A + PV+ + M Sbjct: 1 MAFLIMSSAAAVATGTNAAQASMIAPFTGLKSAT-SFPVSRKQNLDITSIASNGGRVQCM 59 Query: 152 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 331 VW P+N K +ET SYLP LS+EQ+ +V+Y++ NGW+PCLEF E++ +V E+ Sbjct: 60 QVWPPINKKKYETLSYLPDLSEEQLLREVEYLLKNGWVPCLEF-ETEHGFVYREN----- 113 Query: 332 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 + S YYD RYWTMWKLPMFGC D QVL E+ Sbjct: 114 NKSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 145 [107][TOP] >UniRef100_Q9SEB9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Lactuca sativa RepID=Q9SEB9_LACSA Length = 181 Score = 114 bits (285), Expect = 3e-24 Identities = 63/154 (40%), Positives = 87/154 (56%), Gaps = 13/154 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPA------------QANQMM 154 MA++ + + + + PA++S+ P LK V A PV A + M Sbjct: 1 MASISSSAVATVNRSTPAQASLAAPFTGLKSNV-AFPVTKKANNDFSSLPSNGGRVQCMK 59 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P+ K +ET SYLPPLSDE ++ ++DY++ N W+PCLEF E + +V E G Sbjct: 60 VWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEF-ELEHGFVYREHHHSPG- 117 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D QV++E+ C Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDSAQVMKEVGEC 147 [108][TOP] >UniRef100_B7FHB2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Medicago truncatula RepID=B7FHB2_MEDTR Length = 180 Score = 114 bits (285), Expect = 3e-24 Identities = 64/146 (43%), Positives = 83/146 (56%), Gaps = 18/146 (12%) Frame = +2 Query: 44 SAAVARPARSS------VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPV 169 SAAV +R+S V P LK + A PV + N M VW P+ Sbjct: 6 SAAVTTVSRASSTQANLVAPFTGLKSSA-AFPVTKKTNNDITSIASNGGRVNCMQVWPPI 64 Query: 170 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 349 K FET SYLPPL++EQ+A +V+Y++ GW+PCLEF E +K +V E+ G Y Sbjct: 65 GKKKFETLSYLPPLTEEQLAKEVEYLIRKGWVPCLEF-ELEKGFVYRENHSSPG-----Y 118 Query: 350 YDNRYWTMWKLPMFGCRDPMQVLREI 427 YD RYWTMWKLP+FG D QVL+E+ Sbjct: 119 YDGRYWTMWKLPLFGATDSSQVLKEL 144 [109][TOP] >UniRef100_A9TVU8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TVU8_PHYPA Length = 176 Score = 114 bits (285), Expect = 3e-24 Identities = 64/152 (42%), Positives = 87/152 (57%), Gaps = 11/152 (7%) Frame = +2 Query: 14 MAAVI----AKSSVSAAVARPARSSVRPMAALKPAV----KAAPVAAPAQANQ---MMVW 160 MA+++ A ++ S+ ++ +S + LK A KA +++ ++ M VW Sbjct: 1 MASIVVTPAAFAAASSGLSTSQSTSAKAFTGLKSATLFPSKAQTLSSVQNGSRVQCMQVW 60 Query: 161 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 340 P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF S+ R + S Sbjct: 61 NPIGQTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSN-------GVSRVNNSS 113 Query: 341 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC+D QVLREI C Sbjct: 114 PGYYDGRYWTMWKLPMFGCQDSAQVLREIEEC 145 [110][TOP] >UniRef100_P18960 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Silene latifolia subsp. alba RepID=RBS_SILPR Length = 177 Score = 114 bits (285), Expect = 3e-24 Identities = 63/153 (41%), Positives = 87/153 (56%), Gaps = 12/153 (7%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPA------------QANQMMV 157 MA++++ ++V A + V P + LK + A PV+ + + N M V Sbjct: 1 MASLMSNAAVVTASTAAQANMVAPFSGLK-STSAFPVSRKSNVDITSLATNGGRVNCMQV 59 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W P N K FET SYLP LS+E + +++Y++ GW+PCLEF E A+V E+ + Sbjct: 60 WPPRNLKKFETLSYLPTLSEESLLKEINYLLIKGWVPCLEF-EVGPAHVYREN-----NK 113 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 S YYD RYWTMWKLPMFGC D QV E+V C Sbjct: 114 SPGYYDGRYWTMWKLPMFGCTDASQVAAEVVEC 146 [111][TOP] >UniRef100_P26577 Ribulose bisphosphate carboxylase small chain 2C, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBSC_SOLTU Length = 180 Score = 114 bits (285), Expect = 3e-24 Identities = 64/151 (42%), Positives = 87/151 (57%), Gaps = 13/151 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP------------AQANQMM 154 MA+ + S+ A A++S V P LK + + PV+ + M Sbjct: 1 MASSVMSSAAVATRGNGAQASMVAPFTGLK-STASFPVSRKQNLDITSIASNGGRVRCMQ 59 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+ + Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYREN-----N 113 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 S YYD RYWTMWKLPMFGC D QVL E+ Sbjct: 114 KSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 144 [112][TOP] >UniRef100_Q08186 Ribulose bisphosphate carboxylase small chain 6, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS6_MESCR Length = 186 Score = 114 bits (285), Expect = 3e-24 Identities = 65/148 (43%), Positives = 82/148 (55%), Gaps = 12/148 (8%) Frame = +2 Query: 20 AVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVA---------APAQANQ---MMVWT 163 A +A ++ S + A S V P LK +V A PV P+ + M VW Sbjct: 9 AAVATTAASRSAGAQA-SMVAPFTGLK-SVSAFPVTRKSSNDLSTVPSNGGKVQCMQVWP 66 Query: 164 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 343 P+ K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G Sbjct: 67 PLGKKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG---- 121 Query: 344 LYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC DP QV+ E+ Sbjct: 122 -YYDGRYWTMWKLPMFGCTDPSQVVAEL 148 [113][TOP] >UniRef100_Q39746 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS4_FLAPR Length = 178 Score = 114 bits (285), Expect = 3e-24 Identities = 64/150 (42%), Positives = 88/150 (58%), Gaps = 11/150 (7%) Frame = +2 Query: 20 AVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTP 166 A I+ + + + A PA+++ V P LK PA K A + +N M VW P Sbjct: 2 ASISSTVATVSRAAPAQANMVAPFTGLKSNAAFPATKKANDFSTLPSNGGRVQCMKVWPP 61 Query: 167 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 346 + K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G Sbjct: 62 LGKKKYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG----- 115 Query: 347 YYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D QV++E+ C Sbjct: 116 YYDGRYWTMWKLPMFGCTDSAQVMKELQEC 145 [114][TOP] >UniRef100_Q39744 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS2_FLAPR Length = 178 Score = 114 bits (285), Expect = 3e-24 Identities = 64/150 (42%), Positives = 88/150 (58%), Gaps = 11/150 (7%) Frame = +2 Query: 20 AVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTP 166 A I+ + + + A PA+++ V P LK PA K A + +N M VW P Sbjct: 2 ASISSTVATVSRAAPAQANMVAPFTGLKSNVAFPATKKANDFSTLPSNGGRVQCMKVWPP 61 Query: 167 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 346 + K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G Sbjct: 62 LGKKRYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG----- 115 Query: 347 YYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D QV++E+ C Sbjct: 116 YYDGRYWTMWKLPMFGCTDSAQVMKELQEC 145 [115][TOP] >UniRef100_A9TWX2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TWX2_PHYPA Length = 182 Score = 114 bits (284), Expect = 4e-24 Identities = 68/157 (43%), Positives = 85/157 (54%), Gaps = 16/157 (10%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS---------VRPMAALK-------PAVKAAPVAAPAQAN 145 MA+ +A S+V A A SS V+ LK + K + V ++ Sbjct: 1 MASTVACSTVVAPAVFAAASSSVASSDSVTVKASTCLKGPTFFASKSQKLSSVQNGSRVQ 60 Query: 146 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 325 M VW P+ FETFSYLPPLSDE IA QV+Y++ IPCLEF ++++ R Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDEAIAKQVEYMIQQKLIPCLEFD------LNSKGVSR 114 Query: 326 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 + S YYD RYWTMWKLPMFGC D QVLREI C Sbjct: 115 DNNSSPGYYDGRYWTMWKLPMFGCNDSAQVLREIQEC 151 [116][TOP] >UniRef100_O48550 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Zantedeschia aethiopica RepID=RBS_ZANAE Length = 178 Score = 114 bits (284), Expect = 4e-24 Identities = 62/153 (40%), Positives = 84/153 (54%), Gaps = 11/153 (7%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ----------MMVW 160 MA+ + S+ + + PA+S+ V P A L + A +++ M VW Sbjct: 1 MASSMMVSTAAVSRTSPAQSNMVVPFAGLHSSAAFPVTRKFADSSKLPSNGLRVRCMQVW 60 Query: 161 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 340 P K FET SYLPPL+ EQ+ +VDY++ NGWIPC+EF + Y + S Sbjct: 61 PPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHN-------S 113 Query: 341 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACT 439 YYD RYWTMWKLPMFGC D QVL+E+ C+ Sbjct: 114 PGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECS 146 [117][TOP] >UniRef100_P07089 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Flaveria trinervia RepID=RBS_FLATR Length = 173 Score = 114 bits (284), Expect = 4e-24 Identities = 65/146 (44%), Positives = 84/146 (57%), Gaps = 12/146 (8%) Frame = +2 Query: 35 SSVSAAVAR-PARSSVRPMAALKPAVKAAPVAA--------PAQANQ---MMVWTPVNNK 178 +S+ A VA P + V P LK A A PV P+ + M VW PV K Sbjct: 2 ASIPATVAAVPQTNMVAPFTGLK-ANAAFPVTKKVNGFSTLPSNGGRVQCMKVWPPVGKK 60 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD Sbjct: 61 KYETLSYLPELTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENASSPG-----YYDG 114 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLPMFGC D QV++E+ C Sbjct: 115 RYWTMWKLPMFGCTDSAQVMKELQEC 140 [118][TOP] >UniRef100_Q08183 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS3_MESCR Length = 183 Score = 114 bits (284), Expect = 4e-24 Identities = 62/144 (43%), Positives = 79/144 (54%), Gaps = 11/144 (7%) Frame = +2 Query: 29 AKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP-----------AQANQMMVWTPVNN 175 A ++++AA + V P LK +V A PV + M VW P+ Sbjct: 9 AATTMAAATTTAQANMVAPFNGLK-SVSAFPVTRKNNDITSVASNGGRVQCMQVWPPLGK 67 Query: 176 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 355 K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G YYD Sbjct: 68 KKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG-----YYD 121 Query: 356 NRYWTMWKLPMFGCRDPMQVLREI 427 RYWTMWKLPMFGC DP QV+ E+ Sbjct: 122 GRYWTMWKLPMFGCTDPSQVVAEL 145 [119][TOP] >UniRef100_Q43115 Ribulose bisphosphate carboxylase small chain n=1 Tax=Malus x domestica x Pyrus communis RepID=Q43115_9ROSA Length = 179 Score = 113 bits (283), Expect = 6e-24 Identities = 65/150 (43%), Positives = 84/150 (56%), Gaps = 12/150 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA-----------QANQMMV 157 MA+ + S A V+ PA++ V P LK + A PV + + M V Sbjct: 1 MASSMISSGTVATVSAPAQARMVAPFTGLKSS-SAFPVTRKSNDITSIASNGGRVQCMQV 59 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W P+ K FET SYLPPLS E +A +VDY++ W+PCLEF E + +V E+ G Sbjct: 60 WPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEF-ELEHGFVYRENNRSPG-- 116 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QVL+E+ Sbjct: 117 ---YYDGRYWTMWKLPMFGCTDSSQVLKEL 143 [120][TOP] >UniRef100_P08705 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Helianthus annuus RepID=RBS_HELAN Length = 178 Score = 113 bits (283), Expect = 6e-24 Identities = 63/150 (42%), Positives = 87/150 (58%), Gaps = 16/150 (10%) Frame = +2 Query: 35 SSVSAAVARPARSS------VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTP 166 +S+S++VA +R++ V P LK P K A + +N M VW P Sbjct: 2 ASISSSVATVSRTAPAQANMVAPFTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPP 61 Query: 167 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 346 + K +ET SYLPPL++ Q+A +VDY++ W+PCLEF E + +V E+A G Sbjct: 62 LGLKKYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEF-ELEHGFVYRENARSPG----- 115 Query: 347 YYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D QV++E+ C Sbjct: 116 YYDGRYWTMWKLPMFGCTDSAQVMKELAEC 145 [121][TOP] >UniRef100_P26573 Ribulose bisphosphate carboxylase small chain 8B, chloroplastic n=1 Tax=Nicotiana plumbaginifolia RepID=RBS8_NICPL Length = 180 Score = 113 bits (283), Expect = 6e-24 Identities = 63/152 (41%), Positives = 86/152 (56%), Gaps = 12/152 (7%) Frame = +2 Query: 8 LKMAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQM 151 L AAV +S+V+ A + V P LK A + PV+ + M Sbjct: 6 LSSAAVATRSNVAQA------NMVAPFTGLKSAA-SFPVSRKQNLDITSIASNGGRVQCM 58 Query: 152 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 331 VW P+N K +ET SYLP LS EQ+ ++++Y++ +GW+PCLEF E+++ +V E G Sbjct: 59 QVWPPINKKKYETLSYLPDLSQEQLLSEIEYLLKSGWVPCLEF-ETERGFVYREHHHSPG 117 Query: 332 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QVL E+ Sbjct: 118 -----YYDGRYWTMWKLPMFGCTDATQVLAEV 144 [122][TOP] >UniRef100_B7ZYT6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Zea mays RepID=B7ZYT6_MAIZE Length = 153 Score = 113 bits (282), Expect = 7e-24 Identities = 52/94 (55%), Positives = 61/94 (64%) Frame = +2 Query: 146 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 325 +M VW NK FET SYLPPLS + + QVDY++ NGWIPCLEF++ Y N Sbjct: 30 RMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFSKLGFVYREN----- 84 Query: 326 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 S S YYD RYWTMWKLPMFGC D QV +E+ Sbjct: 85 --STSPCYYDGRYWTMWKLPMFGCTDATQVYKEL 116 [123][TOP] >UniRef100_Q42516 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Amaranthus hypochondriacus RepID=RBS1_AMAHP Length = 183 Score = 113 bits (282), Expect = 7e-24 Identities = 65/144 (45%), Positives = 80/144 (55%), Gaps = 11/144 (7%) Frame = +2 Query: 29 AKSSVSAAVARPARSSVRPMAALK-----PAVKAAP---VAAPAQANQ---MMVWTPVNN 175 A + +AA A S V P LK P K + + P+ + M VW PV Sbjct: 9 AAMATTAATAGAQASMVAPFNGLKSFATFPITKKSSNDFSSLPSNGGRVQCMQVWPPVGK 68 Query: 176 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 355 K FET SYLPPLSD Q+ AQV Y++ GWIPC+EF E + +V E+ G Y D Sbjct: 69 KKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEF-ELEHPFVYRENHRSPG-----YQD 122 Query: 356 NRYWTMWKLPMFGCRDPMQVLREI 427 RYWTMWKLPM+GC DP QVL E+ Sbjct: 123 GRYWTMWKLPMYGCTDPAQVLNEV 146 [124][TOP] >UniRef100_B9T1N0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ricinus communis RepID=B9T1N0_RICCO Length = 185 Score = 112 bits (281), Expect = 1e-23 Identities = 65/152 (42%), Positives = 88/152 (57%), Gaps = 14/152 (9%) Frame = +2 Query: 14 MAAVIAKSSVSAAVAR--PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ------M 151 MA+ + ++ A++ R PA++S V P LK P + AN M Sbjct: 1 MASSMLSTATVASLNRASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCM 60 Query: 152 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 331 VW P+ K FET SYLP L+ EQ+A +V+Y++ GW+PCLEF E + +V E+A G Sbjct: 61 QVWPPLGKKKFETLSYLPDLTREQLAKEVEYLLRKGWVPCLEF-ELEHGFVYRENARSPG 119 Query: 332 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D +QVL+E+ Sbjct: 120 -----YYDGRYWTMWKLPMFGCSDAVQVLKEL 146 [125][TOP] >UniRef100_A9YTZ9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Solanum tuberosum RepID=A9YTZ9_SOLTU Length = 181 Score = 112 bits (281), Expect = 1e-23 Identities = 61/149 (40%), Positives = 84/149 (56%), Gaps = 6/149 (4%) Frame = +2 Query: 8 LKMAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------MMVWTPV 169 + AAV +++V+ A + A + AA P + + + A+ M VW P+ Sbjct: 6 ISSAAVATRTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPI 65 Query: 170 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 349 N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ V E G Y Sbjct: 66 NTKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGIVYREKHKSPG-----Y 119 Query: 350 YDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YD RYW MWKLPMFGC D QVL E+ C Sbjct: 120 YDGRYWNMWKLPMFGCTDATQVLAEVQEC 148 [126][TOP] >UniRef100_Q08184 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS4_MESCR Length = 183 Score = 112 bits (281), Expect = 1e-23 Identities = 61/144 (42%), Positives = 79/144 (54%), Gaps = 11/144 (7%) Frame = +2 Query: 29 AKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP-----------AQANQMMVWTPVNN 175 A ++++AA + V P LK ++ A PV + M VW P+ Sbjct: 9 AATTMAAATTTAQANMVAPFNGLK-SISAFPVTRKNNDITSVASNGGRVQCMQVWPPLGM 67 Query: 176 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 355 K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G YYD Sbjct: 68 KKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG-----YYD 121 Query: 356 NRYWTMWKLPMFGCRDPMQVLREI 427 RYWTMWKLPMFGC DP QV+ E+ Sbjct: 122 GRYWTMWKLPMFGCTDPSQVVAEL 145 [127][TOP] >UniRef100_P10797 Ribulose bisphosphate carboxylase small chain 2B, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=RBS2B_ARATH Length = 181 Score = 112 bits (281), Expect = 1e-23 Identities = 63/146 (43%), Positives = 83/146 (56%), Gaps = 13/146 (8%) Frame = +2 Query: 38 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 178 S +A V PA+++ V P LK + + PV A + + M VW P+ K Sbjct: 7 SSTAVVTSPAQATMVAPFTGLKSSA-SFPVTRKANNDITSITSNGGRVSCMKVWPPIGKK 65 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 FET SYLP LSD ++A +VDY++ N WIPC+EF E + +V E G YYD Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG-----YYDG 119 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLP+FGC D QVL+E+ C Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVEEC 145 [128][TOP] >UniRef100_Q9AUJ3 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Flaveria palmeri RepID=Q9AUJ3_FLAPA Length = 131 Score = 112 bits (280), Expect = 1e-23 Identities = 51/96 (53%), Positives = 65/96 (67%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW PV K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A Sbjct: 9 MKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLIRNKWVPCLEF-ELEHGFVYRENASSP 67 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 G YYD RYWTMWKLPMFGC D QV++E+ C Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSAQVMKELQEC 98 [129][TOP] >UniRef100_Q9AQX3 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Flaveria palmeri RepID=Q9AQX3_FLAPA Length = 131 Score = 112 bits (280), Expect = 1e-23 Identities = 51/96 (53%), Positives = 65/96 (67%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW PV K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A Sbjct: 9 MKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLIRNKWVPCLEF-ELEHGFVYRENASSP 67 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 G YYD RYWTMWKLPMFGC D QV++E+ C Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSAQVMKELQEC 98 [130][TOP] >UniRef100_Q6RWD8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Capsicum annuum RepID=Q6RWD8_CAPAN Length = 180 Score = 112 bits (280), Expect = 1e-23 Identities = 50/93 (53%), Positives = 64/93 (68%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M+VW P+N K +ET SYLP LSDEQ+ +++Y++ GW+PCLEF E++ +V E Sbjct: 58 MLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEF-ETEHGFVYREHHRSP 116 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 G YYD RYWTMWKLPMFGC D QVL E+ Sbjct: 117 G-----YYDGRYWTMWKLPMFGCTDATQVLNEV 144 [131][TOP] >UniRef100_Q5ZF97 Ribulose bisphosphate carboxylase small chain n=1 Tax=Plantago major RepID=Q5ZF97_PLAMJ Length = 177 Score = 112 bits (280), Expect = 1e-23 Identities = 63/150 (42%), Positives = 84/150 (56%), Gaps = 9/150 (6%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQ----ANQMMVWTP 166 MA+ + +S +A R + V P A LK PA + A A+ M VW P Sbjct: 1 MASSMLSTSSTAVAGRAQATMVAPYAGLKSTSVFPATRKTGNAKLARNAGKVRCMQVWPP 60 Query: 167 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 346 + K +ET SYLP L+ EQ+A ++DY++ + WIPCLEF E + +V E+ G Sbjct: 61 LGKKKYETLSYLPDLTVEQLAKEIDYLLRSKWIPCLEF-ELEHGFVYRENNRSPG----- 114 Query: 347 YYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D QV+ E+ C Sbjct: 115 YYDGRYWTMWKLPMFGCTDASQVIAELEEC 144 [132][TOP] >UniRef100_B9T055 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ricinus communis RepID=B9T055_RICCO Length = 180 Score = 112 bits (280), Expect = 1e-23 Identities = 62/149 (41%), Positives = 81/149 (54%), Gaps = 12/149 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQMMVW 160 ++++ + S A P S V P LK + PV + + M VW Sbjct: 3 SSIVPSTMASLNRAAPQASMVAPFTGLKSS-SVFPVTRKQNNDITTLASNGGKVHCMQVW 61 Query: 161 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 340 PV K FET SYLPPLS+E +A +VDY++ GW+PCLEF E + +V E+ G Sbjct: 62 PPVGKKKFETLSYLPPLSEESLAKEVDYLLRMGWVPCLEF-ELEHGFVYRENHRSPG--- 117 Query: 341 CLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD R WTMWKLPMFGC D QVL+E+ Sbjct: 118 --YYDGRCWTMWKLPMFGCTDSSQVLKEL 144 [133][TOP] >UniRef100_A9XP21 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Sonneratia apetala RepID=A9XP21_9MYRT Length = 178 Score = 112 bits (280), Expect = 1e-23 Identities = 65/144 (45%), Positives = 84/144 (58%), Gaps = 13/144 (9%) Frame = +2 Query: 35 SSVSAAVAR--PARSS-VRPMAALKPAV------KAAPVAAPA----QANQMMVWTPVNN 175 SS + AV R PA++S V P LK + K A + + A + M VW P Sbjct: 2 SSATMAVNRTAPAQASMVAPFTGLKSSSAFPTTRKTADITSLASNGGRVQCMQVWPPEGL 61 Query: 176 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 355 K FET SYLP LS EQ+ +++Y++ NGW PCLEF+ AY E+ G YYD Sbjct: 62 KKFETLSYLPDLSREQLIKEIEYLIRNGWFPCLEFSCPAFAYPYRENHRSPG-----YYD 116 Query: 356 NRYWTMWKLPMFGCRDPMQVLREI 427 RYWTMWKLPMFGC DP+QV++E+ Sbjct: 117 GRYWTMWKLPMFGCTDPIQVIKEL 140 [134][TOP] >UniRef100_O65349 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Capsicum annuum RepID=RBS_CAPAN Length = 187 Score = 112 bits (280), Expect = 1e-23 Identities = 50/93 (53%), Positives = 64/93 (68%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M+VW P+N K +ET SYLP LSDEQ+ +++Y++ GW+PCLEF E++ +V E Sbjct: 58 MLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEF-ETEHGFVYREHHRSP 116 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 G YYD RYWTMWKLPMFGC D QVL E+ Sbjct: 117 G-----YYDGRYWTMWKLPMFGCTDATQVLNEV 144 [135][TOP] >UniRef100_O22573 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Fritillaria agrestis RepID=RBS3_FRIAG Length = 179 Score = 112 bits (280), Expect = 1e-23 Identities = 65/152 (42%), Positives = 84/152 (55%), Gaps = 12/152 (7%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA-----------QANQMMVW 160 +A + S +AA A PA++S V P LK A PA + M VW Sbjct: 4 SATMLSSVATAARAAPAQASMVAPFVGLKSASAFPVTQKPATGLSTLPSNGGRVQCMKVW 63 Query: 161 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 340 V K FET SYLP LS E + Q++Y++ NGW+PCLEF S + +VS ++ + S Sbjct: 64 PIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEF--SLEGFVSRDN-----NKS 116 Query: 341 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D QV++E C Sbjct: 117 PGYYDGRYWTMWKLPMFGCTDAAQVVKEAAEC 148 [136][TOP] >UniRef100_P10798 Ribulose bisphosphate carboxylase small chain 3B, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=RBS3B_ARATH Length = 181 Score = 112 bits (280), Expect = 1e-23 Identities = 63/146 (43%), Positives = 82/146 (56%), Gaps = 13/146 (8%) Frame = +2 Query: 38 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 178 S +A V PA+++ V P LK + A PV + + M VW P+ K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKK 65 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 FET SYLP LSD ++A +VDY++ N WIPC+EF E + +V E G YYD Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG-----YYDG 119 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLP+FGC D QVL+E+ C Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVEEC 145 [137][TOP] >UniRef100_Q9ZP07 Ribulose bisphosphate carboxylase small chain n=1 Tax=Cicer arietinum RepID=Q9ZP07_CICAR Length = 181 Score = 112 bits (279), Expect = 2e-23 Identities = 59/144 (40%), Positives = 81/144 (56%), Gaps = 16/144 (11%) Frame = +2 Query: 44 SAAVARPARSSVRPMAALKPAVKAAPVAA----------------PAQANQMMVWTPVNN 175 S+AV R+S P A+ P V +A + + M VW P+ Sbjct: 8 SSAVTTVKRASSVPSGAVAPFVGLKSMAGFPVRKVNNDITSIASNGGRVHCMQVWPPIGK 67 Query: 176 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 355 K FET SYLPPL++EQ+ +V+Y++ GW+PCLEF E +K +V E G YYD Sbjct: 68 KKFETLSYLPPLTEEQLLKEVEYLLRKGWVPCLEF-ELEKGFVYREHNNSPG-----YYD 121 Query: 356 NRYWTMWKLPMFGCRDPMQVLREI 427 RYWTMWKLP+FGC + +QVL+E+ Sbjct: 122 GRYWTMWKLPLFGCTEAVQVLKEL 145 [138][TOP] >UniRef100_Q84QE5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nicotiana tabacum RepID=Q84QE5_TOBAC Length = 180 Score = 112 bits (279), Expect = 2e-23 Identities = 62/152 (40%), Positives = 87/152 (57%), Gaps = 12/152 (7%) Frame = +2 Query: 8 LKMAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQM 151 L AAV +++V+ A + V P LK A + PV+ + M Sbjct: 6 LSSAAVATRTNVAQA------NMVAPFTGLKSAA-SFPVSRKQNLDITSIASNGGRVQCM 58 Query: 152 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 331 VW P K +ET SYLP LS+EQ+ ++++Y++ NGW+PCLEF E+++ +V E+ Sbjct: 59 QVWPPYGKKKYETLSYLPDLSEEQLLSEIEYLLKNGWVPCLEF-ETERGFVYREN----- 112 Query: 332 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 + S YYD RYWTMWKLPMFGC D QVL E+ Sbjct: 113 NKSPGYYDGRYWTMWKLPMFGCTDATQVLAEV 144 [139][TOP] >UniRef100_Q84NG5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Flaveria bidentis RepID=Q84NG5_FLABI Length = 173 Score = 112 bits (279), Expect = 2e-23 Identities = 63/146 (43%), Positives = 85/146 (58%), Gaps = 12/146 (8%) Frame = +2 Query: 35 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAA--------PAQANQ---MMVWTPVNNK 178 +S+ A A A+++ V P LK A A PV P+ + M VW PV K Sbjct: 2 ASIPATFATVAQANMVAPFTGLK-ANAAFPVTKKVNGFSTLPSNGGRVQCMKVWPPVGKK 60 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 +ET SYLP L++ Q+A ++DY++ N W+PCLEF E + +V E+A G YYD Sbjct: 61 KYETLSYLPELTEAQLAKEIDYLIRNKWVPCLEF-ELEHGFVYRENARSPG-----YYDG 114 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLPMFGC D QV++E+ C Sbjct: 115 RYWTMWKLPMFGCTDSAQVMKELQEC 140 [140][TOP] >UniRef100_B6RHQ5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Miscanthus x giganteus RepID=B6RHQ5_9POAL Length = 121 Score = 112 bits (279), Expect = 2e-23 Identities = 50/91 (54%), Positives = 60/91 (65%) Frame = +2 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW NK FET SYLPPL++EQ+ QVDY++ N W+PCLEF++ Y N S Sbjct: 1 VWPAYGNKKFETLSYLPPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------S 53 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 S YYD RYWTMWKLPMFGC D QV +E+ Sbjct: 54 TSPCYYDGRYWTMWKLPMFGCTDASQVYKEL 84 [141][TOP] >UniRef100_P17673 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Trifolium repens RepID=RBS_TRIRP Length = 178 Score = 112 bits (279), Expect = 2e-23 Identities = 50/101 (49%), Positives = 67/101 (66%) Frame = +2 Query: 134 AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNE 313 ++ N M VW PV K FET SYLPPL+DEQ+ +V+Y++ GW+PC+EF E +K +V + Sbjct: 51 SRVNCMQVWPPVGKKKFETLSYLPPLTDEQLLKEVEYLLRKGWVPCVEF-ELEKGFVHRQ 109 Query: 314 SAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 G YYD RYWTMW+LP+FG D QVL+E+ C Sbjct: 110 YNSSPG-----YYDGRYWTMWRLPLFGTTDAAQVLKEVAEC 145 [142][TOP] >UniRef100_Q40250 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Lactuca sativa RepID=RBS_LACSA Length = 181 Score = 112 bits (279), Expect = 2e-23 Identities = 51/96 (53%), Positives = 64/96 (66%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW P+ K +ET SYLPPLSDE ++ ++DY++ N WIPCLEF E + +V E Sbjct: 58 MKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEF-ELEHGFVYREHHHSP 116 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 G YYD RYWTMWKLPMFGC D QV++E+ C Sbjct: 117 G-----YYDGRYWTMWKLPMFGCTDSAQVMKEVGEC 147 [143][TOP] >UniRef100_Q39745 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS3_FLAPR Length = 173 Score = 112 bits (279), Expect = 2e-23 Identities = 62/145 (42%), Positives = 84/145 (57%), Gaps = 11/145 (7%) Frame = +2 Query: 35 SSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTPVNNKM 181 +S+ A VA A+++ V P LK P K + +N M VW P+ K Sbjct: 2 ASIPATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKR 61 Query: 182 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 361 +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD R Sbjct: 62 YETLSYLPNLTESQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYDGR 115 Query: 362 YWTMWKLPMFGCRDPMQVLREIVAC 436 YWTMWKLPMFGC D QV++E+ C Sbjct: 116 YWTMWKLPMFGCTDSAQVMKELQEC 140 [144][TOP] >UniRef100_Q39743 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS1_FLAPR Length = 173 Score = 112 bits (279), Expect = 2e-23 Identities = 64/146 (43%), Positives = 86/146 (58%), Gaps = 12/146 (8%) Frame = +2 Query: 35 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAA--------PAQANQ---MMVWTPVNNK 178 +S+ A VA A+++ V P LK A A PV P+ + M VW P+ K Sbjct: 2 ASIPATVATVAQANMVAPFTGLK-ANAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKK 60 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD Sbjct: 61 KYETLSYLPDLTEVQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYDG 114 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLPMFGC D QV++E+ C Sbjct: 115 RYWTMWKLPMFGCTDSAQVMKELQEC 140 [145][TOP] >UniRef100_C1JZ18 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Ageratina adenophora RepID=C1JZ18_9ASTR Length = 178 Score = 111 bits (278), Expect = 2e-23 Identities = 65/150 (43%), Positives = 86/150 (57%), Gaps = 11/150 (7%) Frame = +2 Query: 20 AVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTP 166 A I+ S + + A PA+++ V P LK PA K A + N M VW P Sbjct: 2 ASISSSVATVSRAAPAQANMVAPFTGLKSNAAFPATKKANDFSTLPNNGGRVQCMKVWPP 61 Query: 167 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 346 + K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E A G Sbjct: 62 LGLKKYETLSYLPTLTETQLAKEVDYLLRNKWVPCLEF-ELEHGFVYREHARSPG----- 115 Query: 347 YYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD R+WTMWKLPMFGC D QVL+E+ C Sbjct: 116 YYDGRHWTMWKLPMFGCTDSAQVLKEVGEC 145 [146][TOP] >UniRef100_P12468 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Glycine max RepID=RBS4_SOYBN Length = 178 Score = 111 bits (278), Expect = 2e-23 Identities = 64/148 (43%), Positives = 76/148 (51%), Gaps = 10/148 (6%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 163 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGLPTRKTNNDITSIASNGGRVQCMQVWP 60 Query: 164 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 343 PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSLG---- 115 Query: 344 LYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QVL+E+ Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKEL 142 [147][TOP] >UniRef100_Q9XGX5 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Amaranthus hypochondriacus RepID=RBS2_AMAHP Length = 184 Score = 111 bits (278), Expect = 2e-23 Identities = 53/93 (56%), Positives = 62/93 (66%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW PV K FET SYLPPLSD Q+ AQV Y++ GWIPC+EF E + +V E+ Sbjct: 61 MQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEF-ELEHPFVYRENHRSP 119 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 G Y D RYWTMWKLPM+GC DP QVL E+ Sbjct: 120 G-----YQDGRYWTMWKLPMYGCTDPAQVLNEV 147 [148][TOP] >UniRef100_P10796 Ribulose bisphosphate carboxylase small chain 1B, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=RBS1B_ARATH Length = 181 Score = 111 bits (278), Expect = 2e-23 Identities = 62/146 (42%), Positives = 83/146 (56%), Gaps = 13/146 (8%) Frame = +2 Query: 38 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 178 S +A V PA+++ V P LK + + PV A + + M VW P+ K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-SFPVTRKANNDITSITSNGGRVSCMKVWPPIGKK 65 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 FET SYLP L+D ++A +VDY++ N WIPC+EF E + +V E G YYD Sbjct: 66 KFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG-----YYDG 119 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLP+FGC D QVL+E+ C Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVEEC 145 [149][TOP] >UniRef100_Q8GRJ7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Coffea arabica RepID=Q8GRJ7_COFAR Length = 181 Score = 111 bits (277), Expect = 3e-23 Identities = 65/154 (42%), Positives = 87/154 (56%), Gaps = 13/154 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVAR--PARSS-VRPMAALKPAV------KAAPVAAPA----QANQMM 154 MA+ + S+ A R PA++S V P LK A K+ + + A + M Sbjct: 1 MASSMISSAAVATTTRASPAQASMVAPFNGLKAASSFPISKKSVDITSLATNGGRVQCMQ 60 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P K +ET SYLP L+DEQ+ ++DY++ +GW+PCLEF E +K +V E G Sbjct: 61 VWPPRGLKKYETLSYLPDLTDEQLLKEIDYLIRSGWVPCLEF-ELEKGFVYREYHRSPG- 118 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPM+GC D QVL E+ C Sbjct: 119 ----YYDGRYWTMWKLPMYGCTDATQVLNEVGEC 148 [150][TOP] >UniRef100_Q41351 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Stellaria longipes RepID=RBS_STELP Length = 180 Score = 111 bits (277), Expect = 3e-23 Identities = 62/150 (41%), Positives = 85/150 (56%), Gaps = 12/150 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ------MMV 157 MA+ I S+ A + A++S V P LK P + + + A+ M V Sbjct: 1 MASSIMSSAAVATRSNGAQASMVAPFTGLKSNASFPVSRKTNLDITSIASNGGRVRCMQV 60 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W P+N K +ET SYLP LS EQ+ ++++Y++ NGW+PCLEF E++ +V E G Sbjct: 61 WPPINMKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYREHTSSPG-- 117 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QV E+ Sbjct: 118 ---YYDGRYWTMWKLPMFGCTDATQVAAEV 144 [151][TOP] >UniRef100_Q02980 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Malus sp. RepID=RBS_MALSP Length = 183 Score = 111 bits (277), Expect = 3e-23 Identities = 66/154 (42%), Positives = 85/154 (55%), Gaps = 16/154 (10%) Frame = +2 Query: 14 MAAVIAKSSVSAAVA--RPARSSVR---PMAALKPAVKAAPVAAPA-----------QAN 145 MA+ + S A V+ RPA + R P LK + A+PV + + Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFTGLKSS-SASPVTRKSNDITSIASNGGRVQ 59 Query: 146 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 325 M VW P+ K FET SYLPPLS E +A +VDY++ W+PCLEF E + +V E+ Sbjct: 60 CMQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEF-ELEHGFVYRENHRS 118 Query: 326 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 G YYD RYWTMWKLPMFGC D QVL+E+ Sbjct: 119 PG-----YYDGRYWTMWKLPMFGCTDSSQVLKEL 147 [152][TOP] >UniRef100_Q39749 Ribulose bisphosphate carboxylase small chain 7, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS7_FLAPR Length = 173 Score = 111 bits (277), Expect = 3e-23 Identities = 62/145 (42%), Positives = 84/145 (57%), Gaps = 11/145 (7%) Frame = +2 Query: 35 SSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTPVNNKM 181 +S+ A VA A+++ V P LK P K + +N M VW P+ K Sbjct: 2 ASIPATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLASNGGRVQCMKVWPPLGKKR 61 Query: 182 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 361 +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD R Sbjct: 62 YETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYDGR 115 Query: 362 YWTMWKLPMFGCRDPMQVLREIVAC 436 YWTMWKLPMFGC D QV++E+ C Sbjct: 116 YWTMWKLPMFGCTDSAQVMKELQEC 140 [153][TOP] >UniRef100_Q39747 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS5_FLAPR Length = 173 Score = 111 bits (277), Expect = 3e-23 Identities = 62/145 (42%), Positives = 84/145 (57%), Gaps = 11/145 (7%) Frame = +2 Query: 35 SSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTPVNNKM 181 +S+ A VA A+++ V P LK P K + +N M VW P+ K Sbjct: 2 ASIPATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKR 61 Query: 182 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 361 +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD R Sbjct: 62 YETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYDGR 115 Query: 362 YWTMWKLPMFGCRDPMQVLREIVAC 436 YWTMWKLPMFGC D QV++E+ C Sbjct: 116 YWTMWKLPMFGCTDSAQVMKELQEC 140 [154][TOP] >UniRef100_Q00SG3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus tauri RepID=Q00SG3_OSTTA Length = 191 Score = 110 bits (276), Expect = 4e-23 Identities = 53/122 (43%), Positives = 69/122 (56%), Gaps = 24/122 (19%) Frame = +2 Query: 134 AQANQMMVWTPVNNK-----------------------MFETFSYLPPLSDEQIAAQVDY 244 A A MM+W P NK MFETFS+LPPLSD +IA Q Y Sbjct: 22 ANAKSMMIWRPHGNKYVSRKIKAHARGCVLAITRASRPMFETFSFLPPLSDAEIAKQCQY 81 Query: 245 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLR 421 ++ NGW PC+EF +++ AY S++ LYYDNRYW MWKLPM+GC++ +VL Sbjct: 82 LLNNGWTPCIEFEDAEHAYADGHGWSNLDSSINSLYYDNRYWVMWKLPMYGCQNTDEVLA 141 Query: 422 EI 427 E+ Sbjct: 142 EV 143 [155][TOP] >UniRef100_B7FMC2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Medicago truncatula RepID=B7FMC2_MEDTR Length = 181 Score = 110 bits (276), Expect = 4e-23 Identities = 62/151 (41%), Positives = 84/151 (55%), Gaps = 13/151 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPAR---SSVRPMAALK-----PAVKA-----APVAAPAQANQMM 154 MA+ + SS V R + +V P LK P K + + + N M Sbjct: 1 MASSMISSSAMTTVNRASSVQSGAVAPFVGLKSMAGFPVTKVNKDITSITSNGGRVNCMQ 60 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P+ K FET SYLPPL+ EQ+A +V+Y++ GW+ CLEF E++K +V E+ G Sbjct: 61 VWPPIGKKKFETLSYLPPLTREQLAKEVEYLIRKGWVACLEF-ETEKGFVYRENHSSPG- 118 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLP+FG D QVL+E+ Sbjct: 119 ----YYDGRYWTMWKLPLFGATDASQVLKEL 145 [156][TOP] >UniRef100_P08135 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Raphanus sativus RepID=RBS_RAPSA Length = 181 Score = 110 bits (276), Expect = 4e-23 Identities = 58/135 (42%), Positives = 75/135 (55%) Frame = +2 Query: 32 KSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPL 211 KSS + V R + + +A+ V M VW P+ K FET SYLP L Sbjct: 28 KSSAAFPVTRKTNTDITSIASNGGRVSC-----------MKVWPPIGKKKFETLSYLPDL 76 Query: 212 SDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMF 391 SD ++A +VDY++ N WIPC+EF E + +V E G YYD RYWTMWKLP+F Sbjct: 77 SDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDGRYWTMWKLPLF 130 Query: 392 GCRDPMQVLREIVAC 436 GC D QVL+E+ C Sbjct: 131 GCTDSAQVLKEVQEC 145 [157][TOP] >UniRef100_P19312 Ribulose bisphosphate carboxylase small chain SSU5B, chloroplastic n=1 Tax=Lemna gibba RepID=RBS6_LEMGI Length = 177 Score = 110 bits (276), Expect = 4e-23 Identities = 62/151 (41%), Positives = 84/151 (55%), Gaps = 13/151 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMM 154 MA+ + S+ + A PA+++ V P L+ +V A P A + + M Sbjct: 1 MASSMMASTAAVARVGPAQTNMVAPFNGLRSSV-AFPATRKANNDLSTLPSNGGRVSCMQ 59 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + Sbjct: 60 VWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA------ 113 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 S YYD RYWTMWKLPMFGC D QV+ E+ Sbjct: 114 -SPGYYDGRYWTMWKLPMFGCTDASQVIAEV 143 [158][TOP] >UniRef100_O22572 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Fritillaria agrestis RepID=RBS2_FRIAG Length = 179 Score = 110 bits (276), Expect = 4e-23 Identities = 66/153 (43%), Positives = 86/153 (56%), Gaps = 13/153 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAA---------PAQANQ---MMV 157 +A + S +AA PA++S V P LK A A PV P+ + M V Sbjct: 4 SATMLSSVATAACVAPAQASMVAPFVGLKSA-SAFPVTQKTVTGLSTLPSNGGRVQCMKV 62 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W V K FET SYLP LS E + Q++Y++ NGW+PCLEF S + +VS ++ + Sbjct: 63 WPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEF--SLEGFVSRDN-----NK 115 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 S YYD RYWTMWKLPMFGC D QV++E C Sbjct: 116 SPGYYDGRYWTMWKLPMFGCTDAAQVVKEAAEC 148 [159][TOP] >UniRef100_Q9S7X1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Fritillaria agrestis RepID=Q9S7X1_FRIAG Length = 147 Score = 110 bits (275), Expect = 5e-23 Identities = 64/146 (43%), Positives = 81/146 (55%), Gaps = 12/146 (8%) Frame = +2 Query: 35 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA-----------QANQMMVWTPVNNK 178 S +AA A PA++S V P LK A PA + M VW V K Sbjct: 5 SVATAARAAPAQASMVAPFVGLKSASAFPVTQKPATGLSTLPSNGGRVQCMKVWPIVGLK 64 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 FET SYLP LS E + Q++Y++ NGW+PCLEF S + +VS ++ + S YYD Sbjct: 65 KFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEF--SLEGFVSRDN-----NKSPGYYDG 117 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLPMFGC D QV++E C Sbjct: 118 RYWTMWKLPMFGCTDAAQVVKEAAEC 143 [160][TOP] >UniRef100_Q84LN2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Citrus limon RepID=Q84LN2_CITLI Length = 119 Score = 110 bits (275), Expect = 5e-23 Identities = 52/93 (55%), Positives = 63/93 (67%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW P K FET SYLPPLSDE + +++Y++ +GWIPCLEF E +K +V E Sbjct: 7 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLLRSGWIPCLEF-ELEKGWVYREHHRSP 65 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 G YYD RYWTMWKLPMFGC D QVL+E+ Sbjct: 66 G-----YYDGRYWTMWKLPMFGCTDATQVLKEV 93 [161][TOP] >UniRef100_Q5I8Y4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ammopiptanthus mongolicus RepID=Q5I8Y4_9FABA Length = 174 Score = 110 bits (275), Expect = 5e-23 Identities = 50/96 (52%), Positives = 64/96 (66%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M+VW P+ K FET SYLPPLS E + +V+Y++ GW+PCLEF E + +V E+ Sbjct: 50 MLVWPPLGRKKFETLSYLPPLSIESLTKEVEYLLRKGWVPCLEF-ELEHGFVYRENNRSP 108 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 G YYD RYWTMWKLPMFGC D QV++E+ C Sbjct: 109 G-----YYDGRYWTMWKLPMFGCSDASQVMKELEEC 139 [162][TOP] >UniRef100_Q306K0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica napus RepID=Q306K0_BRANA Length = 181 Score = 110 bits (275), Expect = 5e-23 Identities = 62/146 (42%), Positives = 82/146 (56%), Gaps = 13/146 (8%) Frame = +2 Query: 38 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 178 S +A V PA+++ V P LK + A PV A + + M VW PV K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKANNDITSIASNGGRVSCMKVWPPVGKK 65 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 FET SYLP L++ ++ +VDY++ N WIPC+EF E + +V E G YYD Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDG 119 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLP+FGC D QVL+E+ C Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQEC 145 [163][TOP] >UniRef100_C6SVL2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=C6SVL2_SOYBN Length = 178 Score = 110 bits (275), Expect = 5e-23 Identities = 64/148 (43%), Positives = 76/148 (51%), Gaps = 10/148 (6%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 163 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWA 60 Query: 164 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 343 PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSPG---- 115 Query: 344 LYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QVL+E+ Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKEL 142 [164][TOP] >UniRef100_A9NXP2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=A9NXP2_PICSI Length = 188 Score = 110 bits (275), Expect = 5e-23 Identities = 60/160 (37%), Positives = 89/160 (55%), Gaps = 19/160 (11%) Frame = +2 Query: 14 MAAVIAKSSVSAAVA---RPARSSVRPMAALKPAV---KAAPVAAPAQ------------ 139 MA+V+ S VS+ A P ++ V+ +A+ A+ K+ A A+ Sbjct: 1 MASVMMASMVSSTAALTTMPRKNGVQSLASSVSALNNLKSGSAAFSAKLEWEEKTTTNGS 60 Query: 140 -ANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNES 316 + M VW P+NN+ +ET SYLPPLS E + ++DY+++ GW+PCLEF + +N Sbjct: 61 RVHCMQVWPPINNRKYETLSYLPPLSQESLVKEIDYMISKGWVPCLEFDAVGQIQRTN-- 118 Query: 317 AIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 G + YYD RYW++WKLPMFGC + QVL E+ C Sbjct: 119 ----GVMVPGYYDGRYWSLWKLPMFGCTNSAQVLSELEEC 154 [165][TOP] >UniRef100_P24007 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pyrus pyrifolia RepID=RBS_PYRPY Length = 183 Score = 110 bits (275), Expect = 5e-23 Identities = 62/153 (40%), Positives = 82/153 (53%), Gaps = 15/153 (9%) Frame = +2 Query: 14 MAAVIAKSSVSAAVA--RPARSSVRPMAALKPAVKAAPVAAPAQANQ------------- 148 MA+ + S A V+ RPA + R +A ++ ++N Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFNGLKSSSAFPVTRKSNDITSIASNGGRVQC 60 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW P+ K FET SYLPPLS E +A +VDY++ W+PCLEF E + +V E+ Sbjct: 61 MQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEF-ELETGFVYRENHRSP 119 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 G YYD RYWTMWKLPMFGC D QVL+E+ Sbjct: 120 G-----YYDGRYWTMWKLPMFGCTDSSQVLKEL 147 [166][TOP] >UniRef100_Q39748 Ribulose bisphosphate carboxylase small chain 6, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS6_FLAPR Length = 173 Score = 110 bits (275), Expect = 5e-23 Identities = 63/146 (43%), Positives = 86/146 (58%), Gaps = 12/146 (8%) Frame = +2 Query: 35 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAA--------PAQANQ---MMVWTPVNNK 178 +S+ A VA A+++ V P LK A A PV P+ + M VW P+ K Sbjct: 2 ASIPATVAAVAQANMVAPFTGLK-ANAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKK 60 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 + T SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD Sbjct: 61 KYXTLSYLPNLTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYDG 114 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLPMFGC D +QV++E+ C Sbjct: 115 RYWTMWKLPMFGCTDSVQVMKELQEC 140 [167][TOP] >UniRef100_P27985 Ribulose bisphosphate carboxylase small chain F1, chloroplastic n=1 Tax=Brassica napus RepID=RBS2_BRANA Length = 181 Score = 110 bits (275), Expect = 5e-23 Identities = 62/146 (42%), Positives = 82/146 (56%), Gaps = 13/146 (8%) Frame = +2 Query: 38 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 178 S +A V PA+++ V P LK + A PV A + + M VW PV K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKANNDITSIASNGGRVSCMKVWPPVGKK 65 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 FET SYLP L++ ++ +VDY++ N WIPC+EF E + +V E G YYD Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDG 119 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLP+FGC D QVL+E+ C Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQEC 145 [168][TOP] >UniRef100_P00865 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Glycine max RepID=RBS1_SOYBN Length = 178 Score = 110 bits (275), Expect = 5e-23 Identities = 63/148 (42%), Positives = 77/148 (52%), Gaps = 10/148 (6%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 163 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWP 60 Query: 164 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 343 P+ K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E + S Sbjct: 61 PIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREH-----NRSP 114 Query: 344 LYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QVL+E+ Sbjct: 115 XYYDGRYWTMWKLPMFGCTDASQVLKEL 142 [169][TOP] >UniRef100_O24634 Ribulose bisphosphate carboxylase small chain 1/4, chloroplastic n=1 Tax=Fritillaria agrestis RepID=RBS1_FRIAG Length = 179 Score = 110 bits (275), Expect = 5e-23 Identities = 63/152 (41%), Positives = 83/152 (54%), Gaps = 12/152 (7%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA-----------QANQMMVW 160 ++ + S +AA A PA++S V P LK PA + M VW Sbjct: 4 SSTMLSSVATAACAAPAQASMVAPFVGLKSTSAFPVTQKPATGLSTLPSNGGRVQCMKVW 63 Query: 161 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 340 V K FET SYLP LS E + Q++Y++ NGW+PCLEF S + +VS ++ + S Sbjct: 64 PIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEF--SLEGFVSRDN-----NKS 116 Query: 341 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D QV++E C Sbjct: 117 PGYYDGRYWTMWKLPMFGCTDAAQVVKEAAEC 148 [170][TOP] >UniRef100_P05346 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Brassica napus RepID=RBS1_BRANA Length = 181 Score = 110 bits (275), Expect = 5e-23 Identities = 62/146 (42%), Positives = 82/146 (56%), Gaps = 13/146 (8%) Frame = +2 Query: 38 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 178 S +A V PA+++ V P LK + A PV A + + M VW PV K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSS-SAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKK 65 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 FET SYLP L++ ++ +VDY++ N WIPC+EF E + +V E G YYD Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDG 119 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLP+FGC D QVL+E+ C Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQEC 145 [171][TOP] >UniRef100_Q9FUJ5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=Q9FUJ5_SOYBN Length = 178 Score = 110 bits (274), Expect = 6e-23 Identities = 64/148 (43%), Positives = 76/148 (51%), Gaps = 10/148 (6%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 163 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDTISIASNGGRVQCMQVWP 60 Query: 164 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 343 PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSPG---- 115 Query: 344 LYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QVL+E+ Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKEL 142 [172][TOP] >UniRef100_Q9FUJ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=Q9FUJ4_SOYBN Length = 178 Score = 110 bits (274), Expect = 6e-23 Identities = 64/148 (43%), Positives = 76/148 (51%), Gaps = 10/148 (6%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 163 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWP 60 Query: 164 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 343 PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSPG---- 115 Query: 344 LYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QVL+E+ Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKEL 142 [173][TOP] >UniRef100_Q9AUJ5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Flaveria ramosissima RepID=Q9AUJ5_FLARA Length = 131 Score = 110 bits (274), Expect = 6e-23 Identities = 50/96 (52%), Positives = 65/96 (67%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW P+ K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A Sbjct: 9 MKVWPPLGKKKYETLSYLPDLTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSP 67 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 G YYD RYWTMWKLPMFGC D QV++E+ C Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSAQVMKELQEC 98 [174][TOP] >UniRef100_Q9AUJ2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Flaveria palmeri RepID=Q9AUJ2_FLAPA Length = 131 Score = 110 bits (274), Expect = 6e-23 Identities = 51/96 (53%), Positives = 64/96 (66%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW PV K +ET SYLP L++ Q+A +VDY+ N W+PCLEF E + +V E+A Sbjct: 9 MKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLHRNKWVPCLEF-ELEHGFVYRENASSP 67 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 G YYD RYWTMWKLPMFGC D QV++E+ C Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSAQVMKELQEC 98 [175][TOP] >UniRef100_Q39832 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=Q39832_SOYBN Length = 178 Score = 110 bits (274), Expect = 6e-23 Identities = 64/148 (43%), Positives = 76/148 (51%), Gaps = 10/148 (6%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 163 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWP 60 Query: 164 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 343 PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSPG---- 115 Query: 344 LYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QVL+E+ Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKEL 142 [176][TOP] >UniRef100_Q107A2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=Q107A2_MUSAC Length = 161 Score = 110 bits (274), Expect = 6e-23 Identities = 63/153 (41%), Positives = 86/153 (56%), Gaps = 13/153 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 157 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPGNGGRVQCMKV 59 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVGRENHRSPG-- 115 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D +QV++E+ C Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEEC 145 [177][TOP] >UniRef100_Q107A1 Ribulose bisphosphate carboxylase small chain (Fragment) n=3 Tax=Eumusa RepID=Q107A1_MUSAC Length = 161 Score = 110 bits (274), Expect = 6e-23 Identities = 63/153 (41%), Positives = 86/153 (56%), Gaps = 13/153 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 157 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPGNGGRVQCMKV 59 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVGRENHRSPG-- 115 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D +QV++E+ C Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEEC 145 [178][TOP] >UniRef100_Q106Z6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=Q106Z6_MUSAC Length = 161 Score = 110 bits (274), Expect = 6e-23 Identities = 63/153 (41%), Positives = 86/153 (56%), Gaps = 13/153 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 157 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPSNGGRVQCMKV 59 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVGRENHRSPG-- 115 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D +QV++E+ C Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEEC 145 [179][TOP] >UniRef100_Q106Z4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Musa acuminata RepID=Q106Z4_MUSAC Length = 180 Score = 110 bits (274), Expect = 6e-23 Identities = 63/153 (41%), Positives = 86/153 (56%), Gaps = 13/153 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 157 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 3 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPSNGGRVQCMKV 61 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 62 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVGRENHRSPG-- 117 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D +QV++E+ C Sbjct: 118 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEEC 147 [180][TOP] >UniRef100_A9XP95 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Sonneratia ovata RepID=A9XP95_9MYRT Length = 178 Score = 110 bits (274), Expect = 6e-23 Identities = 63/144 (43%), Positives = 84/144 (58%), Gaps = 13/144 (9%) Frame = +2 Query: 35 SSVSAAVAR--PARSSVR-PMAALKPAV------KAAPVAAPA----QANQMMVWTPVNN 175 SS + AV R PA++S+ P LK + K A + + A + M VW P Sbjct: 2 SSATMAVNRTAPAQASMAAPFTGLKSSSAFPTTRKTADITSLASNGGRVQCMQVWPPEGL 61 Query: 176 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 355 K FET SYLP L+ EQ+ +++Y++ NGW PCLEF+ AY E+ G YYD Sbjct: 62 KKFETLSYLPDLTREQLIKEIEYLIRNGWFPCLEFSCPAFAYPYRENHRSPG-----YYD 116 Query: 356 NRYWTMWKLPMFGCRDPMQVLREI 427 RYWTMWKLPMFGC DP+QV++E+ Sbjct: 117 GRYWTMWKLPMFGCTDPIQVIKEL 140 [181][TOP] >UniRef100_A9XP20 Ribulose bisphosphate carboxylase small chain (Fragment) n=2 Tax=Sonneratia alba RepID=A9XP20_9MYRT Length = 178 Score = 110 bits (274), Expect = 6e-23 Identities = 63/144 (43%), Positives = 84/144 (58%), Gaps = 13/144 (9%) Frame = +2 Query: 35 SSVSAAVAR--PARSS-VRPMAALKPAV------KAAPVAAPA----QANQMMVWTPVNN 175 SS + AV R PA++S V P LK + K A + + A + M VW P Sbjct: 2 SSATMAVNRTAPAQASMVAPFTGLKSSSAFPTTRKTADITSLASNGGRVQCMQVWPPEGL 61 Query: 176 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 355 K FET SYLP L+ EQ+ +++Y++ NGW PCLEF+ AY E+ G YYD Sbjct: 62 KKFETLSYLPDLTREQLIKEIEYLIRNGWFPCLEFSCPAFAYPYRENHRSPG-----YYD 116 Query: 356 NRYWTMWKLPMFGCRDPMQVLREI 427 RYWTMWKLPM+GC DP+QV++E+ Sbjct: 117 GRYWTMWKLPMYGCTDPIQVIKEL 140 [182][TOP] >UniRef100_A4SA23 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4SA23_OSTLU Length = 177 Score = 110 bits (274), Expect = 6e-23 Identities = 48/90 (53%), Positives = 64/90 (71%), Gaps = 1/90 (1%) Frame = +2 Query: 170 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNES-AIRFGSVSCL 346 + +MFETFS+LPPLSD +I+ QV Y++ NGW PC+EF +S AY A S++ Sbjct: 43 SRRMFETFSFLPPLSDAEISKQVQYLLNNGWTPCIEFEDSAHAYTDGHGWANMDTSINAG 102 Query: 347 YYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYDNRYW MWKLPM+GC++P +V+ EI C Sbjct: 103 YYDNRYWVMWKLPMYGCQNPDEVIAEINTC 132 [183][TOP] >UniRef100_Q9T4H0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Manihot esculenta RepID=Q9T4H0_MANES Length = 184 Score = 109 bits (273), Expect = 8e-23 Identities = 65/153 (42%), Positives = 85/153 (55%), Gaps = 15/153 (9%) Frame = +2 Query: 14 MAAVIAKSSVSAAVAR--PARSS-VRPMAALKPAVKAAPVAAPAQANQ------------ 148 MA + ++ A++ R PA++S V P LK + A P A+ Sbjct: 1 MATSMLSTATVASINRASPAQASMVAPFTGLK-STSAFPATTKTSADITSLASNGGRVQC 59 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW K FET SYLPPLS EQ+A+++DY++ +GWIPCLEF E + +V Sbjct: 60 MQVWPTRGKKKFETLSYLPPLSREQLASEIDYLLRSGWIPCLEF-ELEHGFVYRAHGSLP 118 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 G YYD RYWTMWKLPMFGC D QVL+E+ Sbjct: 119 G-----YYDGRYWTMWKLPMFGCTDSSQVLKEL 146 [184][TOP] >UniRef100_Q9AXP2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Citrus reticulata RepID=Q9AXP2_CITRE Length = 118 Score = 109 bits (273), Expect = 8e-23 Identities = 51/93 (54%), Positives = 62/93 (66%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW P K FET SYLPPLSDE + ++ Y++ +GWIPCLEF E +K +V E Sbjct: 2 MQVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEF-ELEKGWVYREHHSSP 60 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 G YYD RYWTMWKLPM+GC D QVL+E+ Sbjct: 61 G-----YYDGRYWTMWKLPMYGCTDATQVLKEV 88 [185][TOP] >UniRef100_Q43746 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica napus RepID=Q43746_BRANA Length = 181 Score = 109 bits (273), Expect = 8e-23 Identities = 65/152 (42%), Positives = 86/152 (56%), Gaps = 15/152 (9%) Frame = +2 Query: 26 IAKSSVSAA--VARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVW 160 +A S +S+A V+ PA+++ V P LK + A PV + N M VW Sbjct: 1 MASSMLSSATVVSSPAQAAMVAPFTGLKSSA-AFPVTRKTNTDITSIASNGGRVNCMKVW 59 Query: 161 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 340 PV K FET SYLP L+D ++A +VDY++ N WIPC+EF E + +V E G Sbjct: 60 PPVGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG--- 115 Query: 341 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 Y D RYWTMWKLP+FGC D QVL+E+ C Sbjct: 116 --YNDGRYWTMWKLPLFGCTDSAQVLKEVQEC 145 [186][TOP] >UniRef100_Q106Y3 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa acuminata RepID=Q106Y3_MUSAC Length = 161 Score = 109 bits (273), Expect = 8e-23 Identities = 63/153 (41%), Positives = 86/153 (56%), Gaps = 13/153 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 157 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPSNGGRVQCMEV 59 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVGRENHRSPG-- 115 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D +QV++E+ C Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEEC 145 [187][TOP] >UniRef100_C6T1Y2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=C6T1Y2_SOYBN Length = 178 Score = 109 bits (273), Expect = 8e-23 Identities = 63/148 (42%), Positives = 76/148 (51%), Gaps = 10/148 (6%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 163 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWP 60 Query: 164 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 343 P+ K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSPG---- 115 Query: 344 LYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QVL+E+ Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKEL 142 [188][TOP] >UniRef100_A4SA21 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4SA21_OSTLU Length = 134 Score = 109 bits (273), Expect = 8e-23 Identities = 48/88 (54%), Positives = 63/88 (71%), Gaps = 1/88 (1%) Frame = +2 Query: 176 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNES-AIRFGSVSCLYY 352 +MFETFS+LPPLSD +I+ QV Y++ NGW PC+EF +S AY A S++ YY Sbjct: 2 RMFETFSFLPPLSDAEISKQVQYLLNNGWTPCIEFEDSAHAYTDGHGWANMDTSINAGYY 61 Query: 353 DNRYWTMWKLPMFGCRDPMQVLREIVAC 436 DNRYW MWKLPM+GC++P +V+ EI C Sbjct: 62 DNRYWVMWKLPMYGCQNPDEVIAEINTC 89 [189][TOP] >UniRef100_O22645 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Fritillaria agrestis RepID=RBS5_FRIAG Length = 179 Score = 109 bits (273), Expect = 8e-23 Identities = 66/153 (43%), Positives = 86/153 (56%), Gaps = 13/153 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAA---------PAQANQ---MMV 157 +A + S +AA A PA++S V P LK A A PV P+ + M V Sbjct: 4 SATMLSSVATAACAAPAQASMVAPFVGLKSA-SAFPVTQKTATGLSTLPSNGGRVQCMKV 62 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W V K FET SYLP LS E + Q++Y++ NGW+PCLEF S + +VS ++ + Sbjct: 63 WPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEF--SLEGFVSRDN-----NK 115 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 S YYD RYWTMWKLPMFGC QV++E C Sbjct: 116 SPGYYDGRYWTMWKLPMFGCTGAAQVVKEAAEC 148 [190][TOP] >UniRef100_P00869 Ribulose bisphosphate carboxylase small chain 3C, chloroplastic n=1 Tax=Pisum sativum RepID=RBS2_PEA Length = 180 Score = 109 bits (273), Expect = 8e-23 Identities = 62/150 (41%), Positives = 85/150 (56%), Gaps = 12/150 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAA--VARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMV 157 MA++I+ S+V+ +R ++V P LK P K +N M V Sbjct: 1 MASMISSSAVTTVSRASRGQSAAVAPFGGLKSMTGFPVKKVNTDITSITSNGGRVKCMQV 60 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W P+ K FET SYLPPL+ +Q+ +V+Y++ GW+PCLEF E +K +V E + Sbjct: 61 WPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEF-ELEKGFVYREH-----NK 114 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 S YYD RYWTMWKLPMFG D QVL+E+ Sbjct: 115 SPGYYDGRYWTMWKLPMFGTTDASQVLKEL 144 [191][TOP] >UniRef100_Q5ZF94 Ribulose bisphosphate carboxylase small chain n=1 Tax=Plantago major RepID=Q5ZF94_PLAMJ Length = 174 Score = 109 bits (272), Expect = 1e-22 Identities = 61/140 (43%), Positives = 79/140 (56%), Gaps = 9/140 (6%) Frame = +2 Query: 44 SAAVARPARSSVRPMAALK------PAVKAAPVAAPAQANQ---MMVWTPVNNKMFETFS 196 SAA S V + LK A K V++P+ + M VW P K +ET S Sbjct: 8 SAATVTAQTSMVGQFSGLKFGSTFPIAKKTGRVSSPSSGLKVRCMQVWPPTGKKKYETLS 67 Query: 197 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 376 YLP L+ EQ+A ++DY++ + WIPCLEF E + +V E+A G YYD RYWTMW Sbjct: 68 YLPDLTVEQLAKEIDYLLRSKWIPCLEF-ELEHGFVYRENARSPG-----YYDGRYWTMW 121 Query: 377 KLPMFGCRDPMQVLREIVAC 436 KLPMFGC D QV+ E+ C Sbjct: 122 KLPMFGCTDASQVIAELEEC 141 [192][TOP] >UniRef100_O49131 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Fritillaria agrestis RepID=O49131_FRIAG Length = 147 Score = 109 bits (272), Expect = 1e-22 Identities = 63/146 (43%), Positives = 80/146 (54%), Gaps = 12/146 (8%) Frame = +2 Query: 35 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA-----------QANQMMVWTPVNNK 178 S +AA A PA++S V P LK PA + M VW V K Sbjct: 5 SVATAARAAPAQASMVAPFVGLKSTFAFPVTQKPATGLSTLPSNGGRVQCMKVWPIVGLK 64 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 FET SYLP LS E + Q++Y++ NGW+PCLEF S + +VS ++ + S YYD Sbjct: 65 KFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEF--SLEGFVSRDN-----NKSPGYYDG 117 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLPMFGC D QV++E C Sbjct: 118 RYWTMWKLPMFGCTDAAQVVKEAAEC 143 [193][TOP] >UniRef100_O49128 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Fritillaria agrestis RepID=O49128_FRIAG Length = 147 Score = 109 bits (272), Expect = 1e-22 Identities = 63/146 (43%), Positives = 80/146 (54%), Gaps = 12/146 (8%) Frame = +2 Query: 35 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA-----------QANQMMVWTPVNNK 178 S +AA A PA++S V P LK PA + M VW V K Sbjct: 5 SVATAARAAPAQASMVAPFVGLKSTSSFPVTQKPATGLSTLPSNGGRVQCMKVWPIVGLK 64 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 FET SYLP LS E + Q++Y++ NGW+PCLEF S + +VS ++ + S YYD Sbjct: 65 KFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEF--SLEGFVSRDN-----NKSPGYYDG 117 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLPMFGC D QV++E C Sbjct: 118 RYWTMWKLPMFGCTDAAQVVKEAAEC 143 [194][TOP] >UniRef100_B3H5S2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Arabidopsis thaliana RepID=B3H5S2_ARATH Length = 186 Score = 109 bits (272), Expect = 1e-22 Identities = 61/146 (41%), Positives = 81/146 (55%), Gaps = 13/146 (8%) Frame = +2 Query: 38 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 178 S +A V PA+++ V P LK + A PV + + M VW P+ K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKK 65 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 FET SYLP LSD ++A +VDY++ N WIPC+EF E + + R + YYD Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEF-ELEVINTKHGFVYREHGNTPGYYDG 124 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLP+FGC D QVL+E+ C Sbjct: 125 RYWTMWKLPLFGCTDSAQVLKEVEEC 150 [195][TOP] >UniRef100_P04714 Ribulose bisphosphate carboxylase small chain SSU8, chloroplastic n=1 Tax=Petunia x hybrida RepID=RBS1_PETHY Length = 180 Score = 109 bits (272), Expect = 1e-22 Identities = 60/149 (40%), Positives = 83/149 (55%), Gaps = 12/149 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQMMVW 160 ++VI+ ++V+ S V P LK AV + PV++ + M VW Sbjct: 3 SSVISSAAVATRTNVAQASMVAPFNGLKSAV-SFPVSSKQNLDITSIASNGGRVQCMQVW 61 Query: 161 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 340 P K +ET SYLP L+DEQ+ +++Y++ GW+PCLEF E++ +V E S Sbjct: 62 PPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEF-ETEHGFVYREY-----HAS 115 Query: 341 CLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QVL E+ Sbjct: 116 PRYYDGRYWTMWKLPMFGCTDATQVLGEL 144 [196][TOP] >UniRef100_Q6A160 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Limonium gibertii RepID=Q6A160_9CARY Length = 153 Score = 108 bits (271), Expect = 1e-22 Identities = 51/97 (52%), Positives = 63/97 (64%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW P K FET SYLPPL E +A ++ Y++ GW+PCLEF E +AY+ E Sbjct: 33 MQVWPPEGLKKFETLSYLPPLDREGLANEISYLMRMGWVPCLEF-EVGEAYIHREYHNLP 91 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACT 439 G YYD RYWTMWKLPM+GC DP QVL+E+ C+ Sbjct: 92 G-----YYDGRYWTMWKLPMYGCTDPAQVLKEVDECS 123 [197][TOP] >UniRef100_Q6A159 Ribulose bisphosphate carboxylase small chain n=1 Tax=Limonium gibertii RepID=Q6A159_9CARY Length = 154 Score = 108 bits (271), Expect = 1e-22 Identities = 51/97 (52%), Positives = 63/97 (64%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW P K FET SYLPPL E +A ++ Y++ GW+PCLEF E +AY+ E Sbjct: 33 MQVWPPEGLKKFETLSYLPPLDREGLANEISYLMRMGWVPCLEF-EVGEAYIHREYHNLP 91 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACT 439 G YYD RYWTMWKLPM+GC DP QVL+E+ C+ Sbjct: 92 G-----YYDGRYWTMWKLPMYGCTDPAQVLKEVDECS 123 [198][TOP] >UniRef100_Q106Z3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Musa acuminata RepID=Q106Z3_MUSAC Length = 181 Score = 108 bits (271), Expect = 1e-22 Identities = 68/156 (43%), Positives = 86/156 (55%), Gaps = 15/156 (9%) Frame = +2 Query: 14 MAAVIAKSSVSAAVAR--PARSS-VRPMAALKPAVKAAPVAAPAQANQ------------ 148 MA+ + SS +A V+R PA+SS V P LK + A PV A A+ Sbjct: 1 MASSVMVSSAAAVVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPSNGGRVQC 59 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ Sbjct: 60 MKVWPIEGKKKFETLSYLPTLVDEVLLKQIEYLLRSKWIPCLEF--SHEGFVWRENHRSP 117 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 G YYD RYWTMWKLPMFGC D QV +E+ C Sbjct: 118 G-----YYDGRYWTMWKLPMFGCTDATQVAKELEEC 148 [199][TOP] >UniRef100_Q106Y4 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa acuminata RepID=Q106Y4_MUSAC Length = 161 Score = 108 bits (271), Expect = 1e-22 Identities = 63/153 (41%), Positives = 86/153 (56%), Gaps = 13/153 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 157 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPGNGGRVQCMKV 59 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVWRENHRSPG-- 115 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D +QV++E+ C Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEEC 145 [200][TOP] >UniRef100_O50053 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Fritillaria agrestis RepID=O50053_FRIAG Length = 147 Score = 108 bits (271), Expect = 1e-22 Identities = 63/146 (43%), Positives = 80/146 (54%), Gaps = 12/146 (8%) Frame = +2 Query: 35 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA-----------QANQMMVWTPVNNK 178 S +AA A PA++S V P LK PA + M VW V K Sbjct: 5 SVATAARAAPAQASMVAPFVGLKSTSSFPVTQKPATGLSTLPSNGGRVQCMKVWPIVGLK 64 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 FET SYLP LS E + Q++Y++ NGW+PCLEF S + +VS ++ + S YYD Sbjct: 65 KFETLSYLPTLSVETLLKQIEYLIRNGWVPCLEF--SLEGFVSRDN-----NKSPGYYDG 117 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLPMFGC D QV++E C Sbjct: 118 RYWTMWKLPMFGCTDAAQVVKEAAEC 143 [201][TOP] >UniRef100_A7LIT5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Corchorus olitorius RepID=A7LIT5_9ROSI Length = 183 Score = 108 bits (271), Expect = 1e-22 Identities = 64/151 (42%), Positives = 82/151 (54%), Gaps = 13/151 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP------------AQANQMM 154 MA+ + S+ A PA+++ V P LK A A P + M Sbjct: 1 MASAMMSSATVVNRASPAQATLVAPFTGLKSA-SAFPTTRKNNRDITSIASNGGRVQCMQ 59 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P+ K FET SYLP L+ Q+A +VDY++ +GWIPCLEF E + +V E G Sbjct: 60 VWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSGWIPCLEF-ELEHGFVYREHHHSPG- 117 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QVL+E+ Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDSSQVLKEL 144 [202][TOP] >UniRef100_P00872 Ribulose bisphosphate carboxylase small chain SSU1, chloroplastic n=1 Tax=Lemna gibba RepID=RBS1_LEMGI Length = 173 Score = 108 bits (271), Expect = 1e-22 Identities = 58/142 (40%), Positives = 74/142 (52%), Gaps = 14/142 (9%) Frame = +2 Query: 44 SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ--------------MMVWTPVNNKM 181 +AAVAR + + A + A +AN M VW P K Sbjct: 5 TAAVARVRPAQTNMVGAFNGCRSSVAFPATRKANNDLSTLPSSGGRVSCMQVWPPEGLKK 64 Query: 182 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 361 FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + S YYD R Sbjct: 65 FETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYREN-------NASPGYYDGR 117 Query: 362 YWTMWKLPMFGCRDPMQVLREI 427 YWTMWKLPMFGC D QV+ E+ Sbjct: 118 YWTMWKLPMFGCTDASQVIAEV 139 [203][TOP] >UniRef100_Q9SPL1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Lactuca sativa RepID=Q9SPL1_LACSA Length = 174 Score = 108 bits (270), Expect = 2e-22 Identities = 50/96 (52%), Positives = 63/96 (65%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW P+ K +ET S LPPLSDE ++ ++DY++ N WIPCLEF E + +V E Sbjct: 58 MKVWPPIGLKKYETLSCLPPLSDEALSKEIDYLIRNKWIPCLEF-ELEHGFVYREHHHSP 116 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 G YYD RYWTMWKLPMFGC D QV++E+ C Sbjct: 117 G-----YYDGRYWTMWKLPMFGCTDSAQVMKEVGEC 147 [204][TOP] >UniRef100_Q107B2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa AAAB Group RepID=Q107B2_MUSPR Length = 161 Score = 108 bits (270), Expect = 2e-22 Identities = 63/153 (41%), Positives = 86/153 (56%), Gaps = 13/153 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 157 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPGNGGRVQCMKV 59 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEALVKQIEYLLRSRWIPCLEF--SHEGFVWRENHRSPG-- 115 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D +QV++E+ C Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKELEEC 145 [205][TOP] >UniRef100_Q96360 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Betula pendula RepID=Q96360_BETVE Length = 110 Score = 108 bits (269), Expect = 2e-22 Identities = 53/96 (55%), Positives = 62/96 (64%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW P+ K FET SYLPPLS EQ+A +VDY++ IPCLEF E + +V E Sbjct: 4 MQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEF-ELEHGFVYREHNRSP 62 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 G YYD RYWTMWKLPMFGC D QVL+E+ C Sbjct: 63 G-----YYDGRYWTMWKLPMFGCNDSSQVLKELEEC 93 [206][TOP] >UniRef100_Q8VX71 Ribulose bisphosphate carboxylase small chain n=1 Tax=Rumex obtusifolius RepID=Q8VX71_RUMOB Length = 181 Score = 108 bits (269), Expect = 2e-22 Identities = 55/140 (39%), Positives = 79/140 (56%), Gaps = 3/140 (2%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ---MMVWTPVNNKMFE 187 +A +A+ S + A + ++ +A K++ ++ P+ + M VW P FE Sbjct: 8 SATVARPSAAQATVIAPFTGLKNIATFPTTRKSSDLSFPSNGGKVRCMQVWPPEGKIKFE 67 Query: 188 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 367 T SYLPPLS+ + AQ++Y++ NGW+PCLEF V + R S YYD RYW Sbjct: 68 TLSYLPPLSEADLLAQINYLLINGWVPCLEFD------VGPGAVYREHHHSPGYYDGRYW 121 Query: 368 TMWKLPMFGCRDPMQVLREI 427 TMWKLPMFGC D QV+ E+ Sbjct: 122 TMWKLPMFGCTDATQVVAEL 141 [207][TOP] >UniRef100_Q107B8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa balbisiana RepID=Q107B8_MUSBA Length = 161 Score = 108 bits (269), Expect = 2e-22 Identities = 62/153 (40%), Positives = 86/153 (56%), Gaps = 13/153 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 157 ++++ S+ + + A PA+SS V P LK + A P+ A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPITRKANADLSHLPSNGGRVQCMKV 59 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEALVKQIEYLLRSRWIPCLEF--SHEGFVWRENHRSPG-- 115 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D +QV++E+ C Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKELEEC 145 [208][TOP] >UniRef100_Q107B7 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa balbisiana RepID=Q107B7_MUSBA Length = 161 Score = 108 bits (269), Expect = 2e-22 Identities = 62/153 (40%), Positives = 86/153 (56%), Gaps = 13/153 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 157 ++++ S+ + + A PA+SS V P LK + A P+ A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPITRKANADLSHLPSNGGRVQCMKV 59 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKRFETLSYLPTLVDEALVKQIEYLLRSRWIPCLEF--SHEGFVWRENHRSPG-- 115 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D +QV++E+ C Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKELEEC 145 [209][TOP] >UniRef100_Q107A5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa AAAB Group RepID=Q107A5_MUSPR Length = 161 Score = 108 bits (269), Expect = 2e-22 Identities = 62/153 (40%), Positives = 86/153 (56%), Gaps = 13/153 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 157 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPSNGGRVQCMKV 59 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W K FET SYLP L +E + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVNEPLVKQIEYLLRSKWIPCLEF--SHEGFVGRENHRSPG-- 115 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D +QV++E+ C Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEEC 145 [210][TOP] >UniRef100_A1YN03 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica rapa RepID=A1YN03_BRACM Length = 181 Score = 108 bits (269), Expect = 2e-22 Identities = 61/146 (41%), Positives = 81/146 (55%), Gaps = 13/146 (8%) Frame = +2 Query: 38 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 178 S +A V PA+++ V P LK + A PV A + + M VW PV K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSS-SAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKK 65 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 FET SYLP L++ ++ +VDY++ N WIPC+E E + +V E G YYD Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEL-ELEHGFVYREHGSTPG-----YYDG 119 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLP+FGC D QVL+E+ C Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQEC 145 [211][TOP] >UniRef100_P31333 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Gossypium hirsutum RepID=RBS_GOSHI Length = 182 Score = 108 bits (269), Expect = 2e-22 Identities = 66/156 (42%), Positives = 88/156 (56%), Gaps = 15/156 (9%) Frame = +2 Query: 14 MAAVIAKSSVSAAV--ARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQ 148 MA+ + S+ A V + PA+++ V P LK A A PV A + Sbjct: 1 MASSMISSATIATVNCSSPAQANMVAPFTGLKSA-SAFPVTRKANNDITSLASNGGRVQC 59 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW P+ K FET SYLP L+ Q+A +VDY++ + WIPCLEF E ++ +V ++ Sbjct: 60 MQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEF-ELEEGFVHR----KY 114 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 S+ YYD RYWTMWKLPMFGC D QVL E+ C Sbjct: 115 SSLP-TYYDGRYWTMWKLPMFGCTDSAQVLEELENC 149 [212][TOP] >UniRef100_O22077 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Fagus crenata RepID=RBS_FAGCR Length = 182 Score = 108 bits (269), Expect = 2e-22 Identities = 65/152 (42%), Positives = 87/152 (57%), Gaps = 14/152 (9%) Frame = +2 Query: 14 MAAVIAKSSVSAAVAR--PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ------M 151 MA+ + S+ A V+R PA+++ V P LK PA + + + A+ M Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCM 60 Query: 152 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 331 VW P+ + FET SYLPPLS E +A Q++Y++ GWIPCLEF E + +V E+ G Sbjct: 61 KVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEF-ELEHPFVYRENNRSPG 119 Query: 332 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYW MWKLPMFGC D QVL E+ Sbjct: 120 -----YYDGRYWVMWKLPMFGCTDATQVLAEL 146 [213][TOP] >UniRef100_P04715 Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic n=1 Tax=Petunia x hybrida RepID=RBS2_PETHY Length = 180 Score = 108 bits (269), Expect = 2e-22 Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 12/149 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQMMVW 160 ++V++ ++V+ + S V P LK A + PV+ + M VW Sbjct: 3 SSVMSSAAVATSTNAAQASMVAPFTGLKSAA-SFPVSRKQNLDITSIASNGGRVQCMQVW 61 Query: 161 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 340 P K +ET SYLP L+DEQ+ +++Y++ GW+PCLEF E++ +V E S Sbjct: 62 PPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEF-ETEHGFVYREY-----HAS 115 Query: 341 CLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QVL E+ Sbjct: 116 PRYYDGRYWTMWKLPMFGCTDATQVLGEL 144 [214][TOP] >UniRef100_Q9TLH3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Manihot esculenta RepID=Q9TLH3_MANES Length = 184 Score = 107 bits (268), Expect = 3e-22 Identities = 51/93 (54%), Positives = 62/93 (66%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW K FET SYLPPLS EQ+A+++DY++ +GWIPCLEF E + +V Sbjct: 60 MQVWPTRGKKKFETLSYLPPLSREQLASEIDYLLRSGWIPCLEF-ELEHGFVYRAHGSLP 118 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 G YYD RYWTMWKLPMFGC D QVL+E+ Sbjct: 119 G-----YYDGRYWTMWKLPMFGCTDSSQVLKEL 146 [215][TOP] >UniRef100_Q42823 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Glycine tabacina RepID=RBS_GLYTA Length = 178 Score = 107 bits (268), Expect = 3e-22 Identities = 63/148 (42%), Positives = 76/148 (51%), Gaps = 10/148 (6%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 163 MA+ + S V R +V P LK P K A +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGTVAPFTGLKSMAGFPTRKTNNDIASIASNGGRVQCMQVWP 60 Query: 164 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 343 K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 TTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHHRSPG---- 115 Query: 344 LYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D QVL+E+ Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKEL 142 [216][TOP] >UniRef100_Q7DM38 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Phaseolus vulgaris RepID=Q7DM38_PHAVU Length = 135 Score = 107 bits (267), Expect = 4e-22 Identities = 50/93 (53%), Positives = 63/93 (67%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 + VW V K FET SYLPPL+ +Q+A +VDY++ GW+PCLEF E + +V E Sbjct: 13 IQVWPTVGKKKFETLSYLPPLTKQQLAKEVDYLLRKGWVPCLEF-ELEHGFVYREH---- 67 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 + S YYD RYWTMWKLPMFGC D QVL+E+ Sbjct: 68 -NKSPGYYDGRYWTMWKLPMFGCTDSSQVLKEL 99 [217][TOP] >UniRef100_Q64FQ1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Fagus sylvatica RepID=Q64FQ1_FAGSY Length = 181 Score = 107 bits (267), Expect = 4e-22 Identities = 65/152 (42%), Positives = 87/152 (57%), Gaps = 14/152 (9%) Frame = +2 Query: 14 MAAVIAKSSVSAAVAR--PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ------M 151 MA+ + S+ A V+R PA+++ V P LK PA + + + A+ M Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATQKSNNDITSLASNGGRVQCM 60 Query: 152 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 331 VW P+ + FET SYLPPLS E +A Q++Y++ GWIPCLEF E + +V E+ G Sbjct: 61 KVWPPLGLQKFETLSYLPPLSLESLAKQIEYLILKGWIPCLEF-ELEHPFVYRENNRSPG 119 Query: 332 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYW MWKLPMFGC D QVL E+ Sbjct: 120 -----YYDGRYWVMWKLPMFGCTDATQVLAEL 146 [218][TOP] >UniRef100_Q43874 Ribulose bisphosphate carboxylase small chain n=1 Tax=Phaseolus vulgaris RepID=Q43874_PHAVU Length = 180 Score = 107 bits (267), Expect = 4e-22 Identities = 50/93 (53%), Positives = 63/93 (67%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 + VW V K FET SYLPPL+ +Q+A +VDY++ GW+PCLEF E + +V E Sbjct: 58 IQVWPTVGKKKFETLSYLPPLTKQQLAKEVDYLLRKGWVPCLEF-ELEHGFVYREH---- 112 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 + S YYD RYWTMWKLPMFGC D QVL+E+ Sbjct: 113 -NKSPGYYDGRYWTMWKLPMFGCTDSSQVLKEL 144 [219][TOP] >UniRef100_O49130 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Fritillaria agrestis RepID=O49130_FRIAG Length = 147 Score = 107 bits (267), Expect = 4e-22 Identities = 62/146 (42%), Positives = 79/146 (54%), Gaps = 12/146 (8%) Frame = +2 Query: 35 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA-----------QANQMMVWTPVNNK 178 S +AA PA++S V P LK PA + M VW V K Sbjct: 5 SVATAARTAPAQASMVAPFVGLKSTSAFPVTQKPATGLSTLPSNGGRVQCMKVWPIVGLK 64 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 FET SYLP LS E + Q++Y++ NGW+PCLEF S + +VS ++ + S YYD Sbjct: 65 KFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEF--SLEGFVSRDN-----NKSPGYYDG 117 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLPMFGC D QV++E C Sbjct: 118 RYWTMWKLPMFGCTDAAQVVKEAAEC 143 [220][TOP] >UniRef100_B1PLM0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Hevea brasiliensis RepID=B1PLM0_HEVBR Length = 183 Score = 107 bits (267), Expect = 4e-22 Identities = 64/152 (42%), Positives = 84/152 (55%), Gaps = 14/152 (9%) Frame = +2 Query: 14 MAAVIAKSSVSAAVAR--PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ------M 151 MA+ + ++ A + R PA++S V P LK P + + A+ M Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCM 60 Query: 152 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 331 VW P K FETF YLPPL+ EQ+A +V+Y+ GW+PCLEF E + V E G Sbjct: 61 QVWPPRGKKFFETFLYLPPLTREQLAKEVEYLFCKGWVPCLEF-ELEHGTVYREYHRSPG 119 Query: 332 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D +QVL+E+ Sbjct: 120 -----YYDGRYWTMWKLPMFGCTDAVQVLQEL 146 [221][TOP] >UniRef100_A9PJN7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa x Populus deltoides RepID=A9PJN7_9ROSI Length = 189 Score = 107 bits (267), Expect = 4e-22 Identities = 62/150 (41%), Positives = 85/150 (56%), Gaps = 13/150 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMV 157 ++VI+ ++V+ PA+++ V P LK + A PV A + M V Sbjct: 3 SSVISSAAVATVNRTPAQANMVAPFNGLK-STSAFPVTRKANNDITSIASNGGRVQCMQV 61 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W P K FET SYLP L+ EQ+A +++Y++ N W+PCLEF E +K +V E G Sbjct: 62 WPPTGLKKFETLSYLPDLTTEQLAREIEYLLRNKWVPCLEF-ELEKGWVYREHHQSPG-- 118 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC + QVL E+ Sbjct: 119 ---YYDGRYWTMWKLPMFGCTEASQVLIEL 145 [222][TOP] >UniRef100_A9PJL4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa x Populus deltoides RepID=A9PJL4_9ROSI Length = 181 Score = 107 bits (267), Expect = 4e-22 Identities = 62/150 (41%), Positives = 85/150 (56%), Gaps = 13/150 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMV 157 ++VI+ ++V+ PA+++ V P LK + A PV A + M V Sbjct: 3 SSVISSAAVATVNRTPAQANMVAPFNGLK-STSAFPVTRKANNDITSIASNGGRVQCMQV 61 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W P K FET SYLP L+ EQ+A +++Y++ N W+PCLEF E +K +V E G Sbjct: 62 WPPTGLKKFETLSYLPDLTTEQLAREIEYLLRNKWVPCLEF-ELEKGWVYREHHQSPG-- 118 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC + QVL E+ Sbjct: 119 ---YYDGRYWTMWKLPMFGCTEASQVLIEL 145 [223][TOP] >UniRef100_A9PHQ1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa RepID=A9PHQ1_POPTR Length = 181 Score = 107 bits (267), Expect = 4e-22 Identities = 62/150 (41%), Positives = 85/150 (56%), Gaps = 13/150 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMV 157 ++VI+ ++V+ PA+++ V P LK + A PV A + M V Sbjct: 3 SSVISSAAVATVNRTPAQANMVAPFNGLK-STSAFPVTRKANNDITSIASNGGRVQCMQV 61 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W P K FET SYLP L+ EQ+A +++Y++ N W+PCLEF E +K +V E G Sbjct: 62 WPPTGLKKFETLSYLPDLTTEQLAQEIEYLLRNKWVPCLEF-ELEKGWVYREHHQSPG-- 118 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC + QVL E+ Sbjct: 119 ---YYDGRYWTMWKLPMFGCTEASQVLIEL 145 [224][TOP] >UniRef100_A1YMW8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica rapa RepID=A1YMW8_BRACM Length = 162 Score = 107 bits (267), Expect = 4e-22 Identities = 56/135 (41%), Positives = 76/135 (56%) Frame = +2 Query: 32 KSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPL 211 KSS + V R A + + + V+ + + M VW PV K FET SYLP L Sbjct: 9 KSSSAFPVTRKANNDITSI-----------VSNGGRVSCMKVWPPVGKKKFETLSYLPDL 57 Query: 212 SDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMF 391 ++ ++ +VDY++ N WIPC+EF E + +V E G YYD RYWTMWKLP+F Sbjct: 58 TEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDGRYWTMWKLPLF 111 Query: 392 GCRDPMQVLREIVAC 436 GC D QVL+E+ C Sbjct: 112 GCTDSAQVLKEVQEC 126 [225][TOP] >UniRef100_Q42915 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Manihot esculenta RepID=RBS_MANES Length = 182 Score = 107 bits (267), Expect = 4e-22 Identities = 52/93 (55%), Positives = 64/93 (68%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW + K FET SYLPPL+ EQ+A++V+Y++ +GWIPCLEF E + V E A Sbjct: 60 MKVWPTLGMKKFETLSYLPPLTREQLASEVEYLLRSGWIPCLEF-ELEHGLVYREHARVP 118 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 G YYD RYWTMWKLPMFGC D QVL+E+ Sbjct: 119 G-----YYDGRYWTMWKLPMFGCTDAAQVLKEL 146 [226][TOP] >UniRef100_P07689 Ribulose bisphosphate carboxylase small chain 3A, chloroplastic n=1 Tax=Pisum sativum RepID=RBS3_PEA Length = 180 Score = 107 bits (267), Expect = 4e-22 Identities = 61/150 (40%), Positives = 84/150 (56%), Gaps = 12/150 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAA--VARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMV 157 MA++I+ S+V+ + ++V P LK P K +N M V Sbjct: 1 MASMISSSAVTTVSRASTVQSAAVAPFGGLKSMTGFPVKKVNTDITSITSNGGRVKCMQV 60 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W P+ K FET SYLPPL+ +Q+ +V+Y++ GW+PCLEF E +K +V E + Sbjct: 61 WPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEF-ELEKGFVYREH-----NK 114 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 S YYD RYWTMWKLPMFG D QVL+E+ Sbjct: 115 SPGYYDGRYWTMWKLPMFGTTDASQVLKEL 144 [227][TOP] >UniRef100_Q9AUJ6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Flaveria ramosissima RepID=Q9AUJ6_FLARA Length = 131 Score = 107 bits (266), Expect = 5e-22 Identities = 49/96 (51%), Positives = 64/96 (66%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW P+ K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+ Sbjct: 9 MKVWPPLGKKKYETLSYLPNLTETQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENHRSP 67 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 G YYD RYWTMWKLPMFGC D QV++E+ C Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSSQVMKELGEC 98 [228][TOP] >UniRef100_Q84Y16 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chrysanthemum x morifolium RepID=Q84Y16_CHRMO Length = 179 Score = 107 bits (266), Expect = 5e-22 Identities = 64/148 (43%), Positives = 82/148 (55%), Gaps = 14/148 (9%) Frame = +2 Query: 35 SSVSAAVARPAR---SSVRPMAALKPAVKAAPV--------AAPAQANQ---MMVWTPVN 172 SS A V R S V P LK V A PV + P+ + M VW P+ Sbjct: 6 SSAVATVNRTTSAQASMVAPFTGLKSNV-AFPVTKKSNDFSSLPSNGGRVQCMKVWPPLG 64 Query: 173 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 352 K +ET SYLPPL++ Q+A +V+Y++ N W+PCLEF E + + E+ G YY Sbjct: 65 LKKYETLSYLPPLTETQLAKEVEYLLRNKWVPCLEF-ELEHGFPYRENNRSPG-----YY 118 Query: 353 DNRYWTMWKLPMFGCRDPMQVLREIVAC 436 D RYWTMWKLPMFGC D QVL+E+ C Sbjct: 119 DGRYWTMWKLPMFGCNDASQVLKELNEC 146 [229][TOP] >UniRef100_Q42822 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Glycine tomentella RepID=RBS_GLYTO Length = 178 Score = 107 bits (266), Expect = 5e-22 Identities = 62/148 (41%), Positives = 77/148 (52%), Gaps = 10/148 (6%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 163 MA+ + S V R +V P LK P K A +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGTVAPFTGLKSMAGFPTRKTNNDIASIASNGGRVQCMQVWP 60 Query: 164 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 343 K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E+ G Sbjct: 61 TTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYRENHRSPG---- 115 Query: 344 LYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLP+FGC D QVL+E+ Sbjct: 116 -YYDGRYWTMWKLPVFGCTDASQVLKEL 142 [230][TOP] >UniRef100_P08474 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Cucumis sativus RepID=RBS_CUCSA Length = 189 Score = 107 bits (266), Expect = 5e-22 Identities = 64/152 (42%), Positives = 89/152 (58%), Gaps = 14/152 (9%) Frame = +2 Query: 14 MAAVIAKSSVSAAV--ARPARSS-VRPMAALKPA----------VKAAPVAAPAQANQMM 154 MA+ I S+ A+V A PA++S V P LK + V +A+ A Q M Sbjct: 1 MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCM 60 Query: 155 -VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 331 VW P+ + FET SYLP +S+EQ++ + DY++ NGW+PC+EF + +V E+ G Sbjct: 61 KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEF-DIGSGFVYRENHRSPG 119 Query: 332 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 +YD RYWTMWKLPMFGC D QV++EI Sbjct: 120 -----FYDGRYWTMWKLPMFGCTDSSQVIQEI 146 [231][TOP] >UniRef100_P00868 Ribulose bisphosphate carboxylase small chain, chloroplastic (Fragment) n=1 Tax=Pisum sativum RepID=RBS1_PEA Length = 136 Score = 107 bits (266), Expect = 5e-22 Identities = 49/93 (52%), Positives = 63/93 (67%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW P+ K FET SYLPPL+ +Q+ +V+Y++ GW+PCLEF E K +V E Sbjct: 14 MQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEF-ELLKGFVYGEH---- 68 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 + S YYD RYWTMWKLPMFG DP QV++E+ Sbjct: 69 -NKSPRYYDGRYWTMWKLPMFGTTDPAQVVKEV 100 [232][TOP] >UniRef100_Q9FRZ2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum aestivum RepID=Q9FRZ2_WHEAT Length = 175 Score = 106 bits (265), Expect = 7e-22 Identities = 57/137 (41%), Positives = 78/137 (56%), Gaps = 1/137 (0%) Frame = +2 Query: 20 AVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFS 196 AV+A S+ S A + +S+ P++ + + V+ + M VW K FET S Sbjct: 4 AVMASSATSVAPFQGLKSTAGLPVSRRSSSAGLSSVSNGGRIRCMQVWPIEGIKKFETLS 63 Query: 197 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 376 YLPPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMW Sbjct: 64 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMW 116 Query: 377 KLPMFGCRDPMQVLREI 427 KLPMFGC D QVL E+ Sbjct: 117 KLPMFGCTDATQVLNEV 133 [233][TOP] >UniRef100_Q42815 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine soja RepID=Q42815_GLYSO Length = 178 Score = 106 bits (265), Expect = 7e-22 Identities = 63/148 (42%), Positives = 75/148 (50%), Gaps = 10/148 (6%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 163 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWP 60 Query: 164 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 343 PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSPG---- 115 Query: 344 LYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD R WTMWKLPMFGC D QVL+E+ Sbjct: 116 -YYDGRCWTMWKLPMFGCTDASQVLKEL 142 [234][TOP] >UniRef100_Q2V327 Ribulose bisphosphate carboxylase small chain n=1 Tax=Arabidopsis thaliana RepID=Q2V327_ARATH Length = 174 Score = 106 bits (265), Expect = 7e-22 Identities = 60/146 (41%), Positives = 79/146 (54%), Gaps = 13/146 (8%) Frame = +2 Query: 38 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 178 S +A V PA+++ V P LK + A PV + + M VW P+ K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKK 65 Query: 179 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 358 FET SYLP LSD ++A +VDY++ N WIPC+EF + G+ YYD Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEF------------ELEHGNTPG-YYDG 112 Query: 359 RYWTMWKLPMFGCRDPMQVLREIVAC 436 RYWTMWKLP+FGC D QVL+E+ C Sbjct: 113 RYWTMWKLPLFGCTDSAQVLKEVEEC 138 [235][TOP] >UniRef100_A9PG69 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa RepID=A9PG69_POPTR Length = 182 Score = 106 bits (265), Expect = 7e-22 Identities = 62/151 (41%), Positives = 88/151 (58%), Gaps = 14/151 (9%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ-------------MM 154 +++I+ ++V+ PA+++ V P LK A A PV+ +AN M Sbjct: 4 SSMISSAAVATVNRTPAQANMVAPFNGLKSAA-AFPVST-RKANDITSIASNGGRVQCMQ 61 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P K FET SYLP L++E++A ++DY++ + W+PCLEF E +K +V E G Sbjct: 62 VWPPTGLKKFETLSYLPDLTEEELAKEIDYLLRSKWVPCLEF-ELEKGWVYREHHSSPG- 119 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC + QVL E+ Sbjct: 120 ----YYDGRYWTMWKLPMFGCTEASQVLLEL 146 [236][TOP] >UniRef100_Q40004 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Hordeum vulgare RepID=RBS_HORVU Length = 174 Score = 106 bits (265), Expect = 7e-22 Identities = 56/135 (41%), Positives = 76/135 (56%) Frame = +2 Query: 23 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 202 V+A S+ S A + +S+ + + +A V+ + M VW K FET SYL Sbjct: 5 VMASSATSVAPFQGLKSTAGLPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYL 64 Query: 203 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 382 PPLS E + QVDY++ + W+PCLEF++ + R + S YYD RYWTMWKL Sbjct: 65 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMWKL 117 Query: 383 PMFGCRDPMQVLREI 427 PMFGC D QVL E+ Sbjct: 118 PMFGCTDATQVLNEV 132 [237][TOP] >UniRef100_P29684 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Hevea brasiliensis RepID=RBS_HEVBR Length = 183 Score = 106 bits (265), Expect = 7e-22 Identities = 63/152 (41%), Positives = 85/152 (55%), Gaps = 14/152 (9%) Frame = +2 Query: 14 MAAVIAKSSVSAAVAR--PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ------M 151 MA+ + ++ A + R PA++S V P LK P + + A+ M Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCM 60 Query: 152 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 331 VW P K +ET SYLPPL+ EQ+A +V+Y++ GW+PCLEF E + V E G Sbjct: 61 QVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEF-ELEHGTVYREYHRSPG 119 Query: 332 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC D +QVL+E+ Sbjct: 120 -----YYDGRYWTMWKLPMFGCTDAVQVLQEL 146 [238][TOP] >UniRef100_Q9XQB5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Vigna radiata var. radiata RepID=Q9XQB5_PHAAU Length = 181 Score = 106 bits (264), Expect = 9e-22 Identities = 50/94 (53%), Positives = 63/94 (67%), Gaps = 1/94 (1%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDK-AYVSNESAIR 325 M VW + K FET SYLP L++EQ+ +VDY++ +GWIPCLEF S K A+ E+ Sbjct: 57 MQVWPTIGKKKFETLSYLPDLTEEQLGKEVDYLLRSGWIPCLEFELSHKDAFPHRENNRS 116 Query: 326 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 G YYD RYWTMWKLPM+GC D QVL+E+ Sbjct: 117 PG-----YYDGRYWTMWKLPMYGCTDSSQVLKEL 145 [239][TOP] >UniRef100_Q9SDY9 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena clauda RepID=Q9SDY9_9POAL Length = 168 Score = 106 bits (264), Expect = 9e-22 Identities = 54/135 (40%), Positives = 76/135 (56%) Frame = +2 Query: 23 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 202 V+A S+ S A + +S+ + + A V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSASSLGSVSNGGRIRCMQVWPTEGIKKFETLSYL 60 Query: 203 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 382 PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113 Query: 383 PMFGCRDPMQVLREI 427 PMFGC D QV++E+ Sbjct: 114 PMFGCTDASQVIKEV 128 [240][TOP] >UniRef100_Q9FRZ5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum aestivum RepID=Q9FRZ5_WHEAT Length = 175 Score = 106 bits (264), Expect = 9e-22 Identities = 56/137 (40%), Positives = 77/137 (56%), Gaps = 1/137 (0%) Frame = +2 Query: 20 AVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFS 196 AV+A S+ S A + +S+ P++ V+ + +M VW K FET S Sbjct: 4 AVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRRMQVWPIEGIKKFETLS 63 Query: 197 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 376 YLPPLS E + QVDY++ + W+PCLEF++ + R + S YYD RYWTMW Sbjct: 64 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMW 116 Query: 377 KLPMFGCRDPMQVLREI 427 KLPMFGC D QV+ E+ Sbjct: 117 KLPMFGCTDATQVINEV 133 [241][TOP] >UniRef100_A7YVW6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Actinidia chinensis RepID=A7YVW6_ACTCH Length = 176 Score = 106 bits (264), Expect = 9e-22 Identities = 58/144 (40%), Positives = 83/144 (57%), Gaps = 5/144 (3%) Frame = +2 Query: 17 AAVIAKSSVS----AAVARPARSSVRPMA-ALKPAVKAAPVAAPAQANQMMVWTPVNNKM 181 A+ I+ S+V+ A++A P P A +L +++ ++ + M VW P+ K Sbjct: 3 ASTISSSAVTSVTRASLASPFAGVKSPSAISLGRKLESGSRSSGFKVKCMQVWPPLGKKK 62 Query: 182 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 361 FET SYLPPL +E + Q+DY++ GWIPC+EF+ + +V E G YYD R Sbjct: 63 FETLSYLPPLPEEALLKQIDYLIRMGWIPCIEFSVGE-GFVYREHHHSPG-----YYDGR 116 Query: 362 YWTMWKLPMFGCRDPMQVLREIVA 433 YWTMWKLPM+GC D QV E+ A Sbjct: 117 YWTMWKLPMYGCTDSTQVRAEVEA 140 [242][TOP] >UniRef100_Q9SAX2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Aegilops sharonensis RepID=Q9SAX2_9POAL Length = 165 Score = 105 bits (263), Expect = 1e-21 Identities = 54/135 (40%), Positives = 75/135 (55%) Frame = +2 Query: 23 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 202 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRYMQVWPIEGIKKFETLSYL 60 Query: 203 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 382 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 383 PMFGCRDPMQVLREI 427 PMFGC D QVL E+ Sbjct: 114 PMFGCTDATQVLNEV 128 [243][TOP] >UniRef100_Q9FEE4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum aestivum RepID=Q9FEE4_WHEAT Length = 174 Score = 105 bits (263), Expect = 1e-21 Identities = 55/136 (40%), Positives = 76/136 (55%) Frame = +2 Query: 20 AVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 199 AV+A S+ + A + +S+ + + + V+ + M VW K FET SY Sbjct: 4 AVMASSATTVAPFQGLKSTAGLPVSRRSSGSLGRVSNGGRIRCMQVWPIEGIKKFETLSY 63 Query: 200 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 379 LPPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWK Sbjct: 64 LPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SSGYYDGRYWTMWK 116 Query: 380 LPMFGCRDPMQVLREI 427 LPMFGC D QVL E+ Sbjct: 117 LPMFGCTDATQVLNEV 132 [244][TOP] >UniRef100_Q9SDY8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena clauda RepID=Q9SDY8_9POAL Length = 168 Score = 105 bits (262), Expect = 2e-21 Identities = 54/135 (40%), Positives = 76/135 (56%) Frame = +2 Query: 23 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 202 V+A S+ S A + +S+ + + A V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSASSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 203 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 382 PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113 Query: 383 PMFGCRDPMQVLREI 427 PMFGC D QV++E+ Sbjct: 114 PMFGCTDASQVIKEV 128 [245][TOP] >UniRef100_Q8W2C5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Larrea tridentata RepID=Q8W2C5_LARTR Length = 107 Score = 105 bits (262), Expect = 2e-21 Identities = 49/93 (52%), Positives = 61/93 (65%) Frame = +2 Query: 149 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 328 M VW P K ET SYLPPLS E +A +++Y + GWIPCLEF+ + +V E++ Sbjct: 2 MKVWPPRGKKKLETLSYLPPLSIESLAKEIEYFIRKGWIPCLEFS-IESGFVYRETSRMP 60 Query: 329 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 G YYD RYWTMWKLPMFGC D +QVL E+ Sbjct: 61 G-----YYDGRYWTMWKLPMFGCTDAVQVLNEL 88 [246][TOP] >UniRef100_Q106Y5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa acuminata RepID=Q106Y5_MUSAC Length = 161 Score = 105 bits (262), Expect = 2e-21 Identities = 62/153 (40%), Positives = 85/153 (55%), Gaps = 13/153 (8%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 157 ++++ S+ + + A PA+SS V P LK + A V A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFRVTRKANADLSHLPSNGGRVQCMKV 59 Query: 158 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 337 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVWRENHRSPG-- 115 Query: 338 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D +QV++E+ C Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEEC 145 [247][TOP] >UniRef100_A9PJ78 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa x Populus deltoides RepID=A9PJ78_9ROSI Length = 182 Score = 105 bits (262), Expect = 2e-21 Identities = 61/151 (40%), Positives = 88/151 (58%), Gaps = 14/151 (9%) Frame = +2 Query: 17 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ-------------MM 154 +++I+ ++V+ PA+++ V P LK + A PV+ +AN M Sbjct: 4 SSMISSAAVATVHRTPAQANMVAPFNGLK-STAAFPVST-RKANDITSIASNGGRVQCMQ 61 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW P K FET SYLP L++E++A ++DY++ + W+PCLEF E +K +V E G Sbjct: 62 VWPPTGLKKFETLSYLPDLTEEELAKEIDYLLRSKWVPCLEF-ELEKGWVHREHHSSPG- 119 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 427 YYD RYWTMWKLPMFGC + QVL E+ Sbjct: 120 ----YYDGRYWTMWKLPMFGCTEASQVLVEL 146 [248][TOP] >UniRef100_A5JPN4 Ribulose bisphosphate carboxylase small chain n=2 Tax=Musa acuminata RepID=A5JPN4_MUSAC Length = 180 Score = 105 bits (262), Expect = 2e-21 Identities = 63/154 (40%), Positives = 83/154 (53%), Gaps = 13/154 (8%) Frame = +2 Query: 14 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MM 154 +++++ S+ + A PA+SS V P LK A A PV A+ M Sbjct: 2 VSSMMVSSAATFTRASPAQSSMVAPFTGLKSA-SAFPVTRKPNADLSHLPSNGGRVQCMK 60 Query: 155 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 334 VW K FET SYLP L DE + Q++Y++ + WIPCLEF K +V E+ G Sbjct: 61 VWPIEGLKKFETLSYLPTLKDEALLKQIEYLLRSKWIPCLEFCP--KGFVWRENHRSPG- 117 Query: 335 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVAC 436 YYD RYWTMWKLPMFGC D +QV +E+ C Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDAVQVAKEVEEC 147 [249][TOP] >UniRef100_P26667 Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=1 Tax=Triticum aestivum RepID=RBS2_WHEAT Length = 175 Score = 105 bits (262), Expect = 2e-21 Identities = 56/137 (40%), Positives = 78/137 (56%), Gaps = 1/137 (0%) Frame = +2 Query: 20 AVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFS 196 AV+A S+ + A + +S+ P++ + + V+ + M VW K FET S Sbjct: 4 AVMASSATTVAPFQGLKSTAGLPISCRSGSTGLSSVSNGGRIRCMQVWPIEGIKKFETLS 63 Query: 197 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 376 YLPPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMW Sbjct: 64 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMW 116 Query: 377 KLPMFGCRDPMQVLREI 427 KLPMFGC D QVL E+ Sbjct: 117 KLPMFGCTDATQVLNEV 133 [250][TOP] >UniRef100_P00871 Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic n=1 Tax=Triticum aestivum RepID=RBS1_WHEAT Length = 174 Score = 105 bits (262), Expect = 2e-21 Identities = 55/136 (40%), Positives = 76/136 (55%) Frame = +2 Query: 20 AVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 199 AV+A S+ + A + +S+ + + V+ + M VW K FET SY Sbjct: 4 AVMASSATTVAPFQGLKSTAGLPVSRRSRGSLGSVSNGGRIRCMQVWPIEGIKKFETLSY 63 Query: 200 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 379 LPPLS E ++ QVDY++ + W+PCLEF++ + + S S YYD RYWTMWK Sbjct: 64 LPPLSTEALSKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWK 116 Query: 380 LPMFGCRDPMQVLREI 427 LPMFGC D QVL E+ Sbjct: 117 LPMFGCTDATQVLNEV 132