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[1][TOP]
>UniRef100_A8J8B2 Plastid-specific ribosomal protein 1 n=1 Tax=Chlamydomonas
reinhardtii RepID=A8J8B2_CHLRE
Length = 286
Score = 285 bits (730), Expect = 8e-76
Identities = 146/147 (99%), Positives = 146/147 (99%), Gaps = 1/147 (0%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID
Sbjct: 95 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 154
Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQR 362
LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQR
Sbjct: 155 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQR 214
Query: 363 QFAELNRIYPANVMRSKTVVL-DPITV 440
QFAELNRIYPANVMRSKTVVL DPITV
Sbjct: 215 QFAELNRIYPANVMRSKTVVLADPITV 241
[2][TOP]
>UniRef100_Q5MCR1 Chloroplast-specific ribosome-associated protein n=1 Tax=Volvox
carteri f. nagariensis RepID=Q5MCR1_VOLCA
Length = 232
Score = 167 bits (423), Expect = 3e-40
Identities = 79/110 (71%), Positives = 96/110 (87%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
KA+ NF+HTLKEVDVTLSARGGDTGTHGKKEQKV+VTI+TLRNGVVRVED E+NLYAAID
Sbjct: 99 KAIQNFAHTLKEVDVTLSARGGDTGTHGKKEQKVDVTIFTLRNGVVRVEDRESNLYAAID 158
Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQ 332
LVCDKIR+KL ++KEKAI++G WPG+AGPKE+V+ + +++TQ
Sbjct: 159 LVCDKIRSKLTRVKEKAITKGKWPGKAGPKENVEGRRTSKSTSRCQVETQ 208
[3][TOP]
>UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO
Length = 284
Score = 85.1 bits (209), Expect = 2e-15
Identities = 51/124 (41%), Positives = 75/124 (60%), Gaps = 2/124 (1%)
Frame = +3
Query: 3 KAVANFS-HTLKEVDVTLSARGG-DTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAA 176
KAVA+F H ++EVDV S+RGG D T G QK EVT+YT RNG++R E+ ++LYA+
Sbjct: 105 KAVAHFDQHDVREVDVRCSSRGGADKKTPGGALQKTEVTVYT-RNGIIRSEEEADDLYAS 163
Query: 177 IDLVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQL 356
ID V DK+ KL+K+KEK IS+ + PK D + + + + D +E +
Sbjct: 164 IDAVSDKLERKLRKVKEKKISKRPKHNKNAPKAQTDAIVEEMQAADEALADESMDYDEVV 223
Query: 357 QRQF 368
+ +F
Sbjct: 224 REKF 227
[4][TOP]
>UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum
bicolor RepID=C5WRX8_SORBI
Length = 310
Score = 79.0 bits (193), Expect = 2e-13
Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 2/148 (1%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
+AV+ H ++EVDV LSARGG+ G G K + E+T+++ R+GV+R E+ + YA+ID
Sbjct: 97 RAVSKHCHLVREVDVRLSARGGELG-RGPKTSRCEITLFSKRHGVLRAEEDAESTYASID 155
Query: 183 LVCDKIRAKLQKIKEK--AISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQL 356
L I+ KL+KIKEK + R G G E+ + +D L + +E
Sbjct: 156 LAAAIIKRKLRKIKEKETEVRRDGDGGAGGAWEE----------ELPLLDDDLVEADELA 205
Query: 357 QRQFAELNRIYPANVMRSKTVVLDPITV 440
AE + A V+R+K + P+TV
Sbjct: 206 AAVGAEDEQTVVAKVVRTKVFEMPPLTV 233
[5][TOP]
>UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1
Tax=Ricinus communis RepID=B9SEK8_RICCO
Length = 311
Score = 79.0 bits (193), Expect = 2e-13
Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 17/130 (13%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
KAV SH ++EVDV LS RGG+ G G K ++ EVT++T ++GV+R E+ +YA+ID
Sbjct: 113 KAVQKHSHLVREVDVRLSVRGGEFGK-GPKIRRCEVTLFTKKHGVIRAEEDAETIYASID 171
Query: 183 LVCDKIRAKLQKIKEKAISRGAW-----------PGRAGPKEDVDE------EDFQEYLK 311
LV I+ KL+KIKEK G P K+D DE ++ ++Y+
Sbjct: 172 LVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVAEPVKDDTDEVDGVLGDEDEDYID 231
Query: 312 EVKMDTQLFD 341
EV + T+ FD
Sbjct: 232 EV-VRTKYFD 240
[6][TOP]
>UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea
RepID=RR30_SPIOL
Length = 302
Score = 79.0 bits (193), Expect = 2e-13
Identities = 41/81 (50%), Positives = 58/81 (71%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
K+VA SH ++EVDV LSARGGD + G K ++ EVT++T R+GV+R E+ +LY++ID
Sbjct: 100 KSVAKHSHLVREVDVRLSARGGDL-SKGPKLRRCEVTLFTKRHGVIRAEEDAESLYSSID 158
Query: 183 LVCDKIRAKLQKIKEKAISRG 245
LV I+ KL+KIK+K G
Sbjct: 159 LVSSIIQRKLRKIKDKVSDHG 179
[7][TOP]
>UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9TA00_PHYPA
Length = 297
Score = 77.8 bits (190), Expect = 3e-13
Identities = 54/143 (37%), Positives = 83/143 (58%)
Frame = +3
Query: 6 AVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDL 185
AV N S +KEVDV +S RGG+TG G++ Q+ EVT++T ++GVVR E+ ++YA+ID
Sbjct: 114 AVHNQSALVKEVDVRMSVRGGETG-RGERLQRCEVTLFTKKHGVVRAEEEAESMYASIDR 172
Query: 186 VCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQRQ 365
V D I KL+KIKEK G P + P+ + EV + ++ D + L+R+
Sbjct: 173 VSDVISRKLRKIKEKDGGHGR-PAKYSPR-----------IGEV-LSNEVVDLDPILERK 219
Query: 366 FAELNRIYPANVMRSKTVVLDPI 434
+L P V+R+K + P+
Sbjct: 220 PDDL----PDEVVRTKYFEMRPM 238
[8][TOP]
>UniRef100_C1N7A9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N7A9_9CHLO
Length = 245
Score = 77.4 bits (189), Expect = 5e-13
Identities = 48/91 (52%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Frame = +3
Query: 3 KAVANFS-HTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAI 179
KAV++F H ++EVDVT SAR G Q +VT+YT RNGVVR E+ +NLYA+I
Sbjct: 71 KAVSHFDMHDVREVDVTCSARSEKQ--QGGDLQMTQVTVYT-RNGVVRSEEEADNLYASI 127
Query: 180 DLVCDKIRAKLQKIKEKAISRGAWPGRAGPK 272
D V DKI KL+KIKEK S+ A +A PK
Sbjct: 128 DAVSDKIERKLRKIKEKKNSKKAGKTKANPK 158
[9][TOP]
>UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR
Length = 306
Score = 77.0 bits (188), Expect = 6e-13
Identities = 48/127 (37%), Positives = 73/127 (57%), Gaps = 14/127 (11%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
KAV SH ++EVDV LS RGG+ G G + ++ EVT++T R+GVVR E+ +YA+ID
Sbjct: 111 KAVQKHSHLVREVDVRLSVRGGELGK-GPRIRRCEVTLFTNRHGVVRAEEDAETIYASID 169
Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGR--------------AGPKEDVDEEDFQEYLKEVK 320
LV I+ KL+KIKEK G G ++V +++ ++ ++EV
Sbjct: 170 LVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVREPVPQVVEGDADEVSQQEVEDSIEEV- 228
Query: 321 MDTQLFD 341
+ T+ FD
Sbjct: 229 VRTKFFD 235
[10][TOP]
>UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis
thaliana RepID=Q9FLV3_ARATH
Length = 365
Score = 76.6 bits (187), Expect = 8e-13
Identities = 51/146 (34%), Positives = 81/146 (55%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
K+V SH ++EVDV LS RGG+ G G + ++ EVT++T ++GVVR E+ +YA ID
Sbjct: 164 KSVQKHSHLVREVDVRLSVRGGEFGK-GPRIRRCEVTLFTKKHGVVRAEEDAETVYACID 222
Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQR 362
LV I+ KL+KIKEK G + + V E + +++V+ T EE+ +
Sbjct: 223 LVSTIIQRKLRKIKEKDSDHGRHM-KGFNRLKVREPVIEPVVEDVEDSTDSSVGEEEEED 281
Query: 363 QFAELNRIYPANVMRSKTVVLDPITV 440
+ ++R+KT + P+TV
Sbjct: 282 DLIK-------EIVRTKTFEMPPLTV 300
[11][TOP]
>UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ
Length = 309
Score = 75.9 bits (185), Expect = 1e-12
Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 7/153 (4%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
+AVA S +KEVDV LSARGG+ + G K + E+T++T R+GV+R E+ + YA+ID
Sbjct: 106 RAVAKHSQLVKEVDVRLSARGGEL-SRGPKICRCEITLFTKRHGVIRAEEDAESTYASID 164
Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKE-------DVDEEDFQEYLKEVKMDTQLFD 341
L I+ KL+KIKEK G P D +++D Q LK+++ D
Sbjct: 165 LASSIIKRKLRKIKEKETDVRHLKGTKPPVSDWPPSLLDNNDDDAQAQLKDLEEAVGAED 224
Query: 342 KEEQLQRQFAELNRIYPANVMRSKTVVLDPITV 440
++ L + V+R+K + P++V
Sbjct: 225 EDTVLTK------------VVRTKVFEMPPLSV 245
[12][TOP]
>UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum
RepID=Q672Q2_SOLLC
Length = 311
Score = 75.9 bits (185), Expect = 1e-12
Identities = 50/146 (34%), Positives = 81/146 (55%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
KAV SH +EVDV LS RGG+ G G K ++ EVT++T ++GV+R E+ ++Y +ID
Sbjct: 110 KAVQKHSHLAREVDVRLSVRGGELGK-GPKIRRCEVTLFTKKHGVIRAEEDGESIYGSID 168
Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQR 362
+V I+ KL+KIKEK RG + D E V+ D + +EE+++
Sbjct: 169 MVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVRDPEALL-----VQEDLETLSQEEEVED 223
Query: 363 QFAELNRIYPANVMRSKTVVLDPITV 440
++ + V+R K+ + P++V
Sbjct: 224 DKSD---GFVTEVVRKKSFDMPPLSV 246
[13][TOP]
>UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
RepID=B8LMC5_PICSI
Length = 321
Score = 75.9 bits (185), Expect = 1e-12
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 9/153 (5%)
Frame = +3
Query: 6 AVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDL 185
AV ++ ++EVDV LS RGG+ G G K ++ EVT++T ++GVVR E+ +YA+ID+
Sbjct: 114 AVQKHANLVREVDVRLSIRGGEVGK-GPKIRRCEVTLFTKKHGVVRAEEEAETIYASIDI 172
Query: 186 VCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQ---------LF 338
V D IR KL+KIKEK G P + + E L V MD + L
Sbjct: 173 VSDIIRRKLRKIKEKD------GGHGRPSKMRKQPKLGELLSTVVMDVKETRDKELDDLA 226
Query: 339 DKEEQLQRQFAELNRIYPANVMRSKTVVLDPIT 437
D EE + +L+ V+R+K + P++
Sbjct: 227 DVEEMRYEKIDDLS----DEVVRTKYFEMPPMS 255
[14][TOP]
>UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
RepID=A9RWK9_PHYPA
Length = 221
Score = 75.9 bits (185), Expect = 1e-12
Identities = 41/75 (54%), Positives = 54/75 (72%)
Frame = +3
Query: 6 AVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDL 185
AV N S +KEVDV +S RGG+TG GK Q+ EVT++T ++GVVR E+ ++YA+ID
Sbjct: 36 AVHNQSALVKEVDVRMSVRGGETGRGGKL-QRCEVTLFTKKHGVVRAEEEAESMYASIDR 94
Query: 186 VCDKIRAKLQKIKEK 230
V D I KL+KIKEK
Sbjct: 95 VSDVISRKLRKIKEK 109
[15][TOP]
>UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group
RepID=C6YXL0_ORYSJ
Length = 321
Score = 75.5 bits (184), Expect = 2e-12
Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 7/152 (4%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
+AVA S +KEVDV LSARGG+ + G K + E+T++T R+GV+R E+ + YA+ID
Sbjct: 106 RAVAKHSQLVKEVDVRLSARGGEL-SRGPKICRCEITLFTKRHGVIRAEEDAESTYASID 164
Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKE-------DVDEEDFQEYLKEVKMDTQLFD 341
L I+ KL+KIKEK G P D +++D Q LK+++ D
Sbjct: 165 LASSIIKRKLRKIKEKETDVRHLKGTKPPVSDWPPSLLDNNDDDAQAQLKDLEEAVGAED 224
Query: 342 KEEQLQRQFAELNRIYPANVMRSKTVVLDPIT 437
++ L R V+R+K + P++
Sbjct: 225 EDTVLTR------------VVRTKVFEMPPLS 244
[16][TOP]
>UniRef100_C6TFU4 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6TFU4_SOYBN
Length = 208
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/81 (48%), Positives = 52/81 (64%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
KAV SH ++EVDV LS RGG G + ++ EVT++T R+GVVR E+ + Y +ID
Sbjct: 95 KAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSID 154
Query: 183 LVCDKIRAKLQKIKEKAISRG 245
LV I+ KL+KIKEK G
Sbjct: 155 LVSSIIQRKLRKIKEKVSDHG 175
[17][TOP]
>UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max
RepID=C6T7E3_SOYBN
Length = 291
Score = 75.1 bits (183), Expect = 2e-12
Identities = 39/81 (48%), Positives = 52/81 (64%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
KAV SH ++EVDV LS RGG G + ++ EVT++T R+GVVR E+ + Y +ID
Sbjct: 95 KAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSID 154
Query: 183 LVCDKIRAKLQKIKEKAISRG 245
LV I+ KL+KIKEK G
Sbjct: 155 LVSSIIQRKLRKIKEKVSDHG 175
[18][TOP]
>UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
RepID=UPI0001984F94
Length = 298
Score = 74.7 bits (182), Expect = 3e-12
Identities = 40/81 (49%), Positives = 54/81 (66%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
KAV SH ++EVDV LS RGG+ G G K ++ EVT++T ++GVVR E+ LY +ID
Sbjct: 103 KAVQKHSHLVREVDVRLSIRGGELGK-GPKIRRCEVTLFTKKHGVVRAEEHAETLYGSID 161
Query: 183 LVCDKIRAKLQKIKEKAISRG 245
+V I+ KL+KIKEK G
Sbjct: 162 MVSSIIQRKLRKIKEKDSDHG 182
[19][TOP]
>UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays
RepID=B6TYP8_MAIZE
Length = 309
Score = 74.7 bits (182), Expect = 3e-12
Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 1/147 (0%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
+AV+ H ++EVDV LSARGG+ G G K + E+T++T R+GV+R E+ + YA+ID
Sbjct: 97 RAVSKHCHLVREVDVRLSARGGELG-RGPKTSRCEITLFTKRHGVLRAEEDAESTYASID 155
Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDV-DEEDFQEYLKEVKMDTQLFDKEEQLQ 359
L ++ KL+KIKEK R G + V DE + L + D D E +
Sbjct: 156 LAAAIVKRKLRKIKEKETE----VRRGGDADGVWDEIPPADLLPPAEAD----DLEAAVG 207
Query: 360 RQFAELNRIYPANVMRSKTVVLDPITV 440
AE A V+R+K + P+TV
Sbjct: 208 ---AEDEETVLAKVVRTKVFEMPPLTV 231
[20][TOP]
>UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1
Tax=Vitis vinifera RepID=A7QEV5_VITVI
Length = 230
Score = 74.7 bits (182), Expect = 3e-12
Identities = 40/81 (49%), Positives = 54/81 (66%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
KAV SH ++EVDV LS RGG+ G G K ++ EVT++T ++GVVR E+ LY +ID
Sbjct: 35 KAVQKHSHLVREVDVRLSIRGGELGK-GPKIRRCEVTLFTKKHGVVRAEEHAETLYGSID 93
Query: 183 LVCDKIRAKLQKIKEKAISRG 245
+V I+ KL+KIKEK G
Sbjct: 94 MVSSIIQRKLRKIKEKDSDHG 114
[21][TOP]
>UniRef100_Q10AC8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative,
expressed n=1 Tax=Oryza sativa Japonica Group
RepID=Q10AC8_ORYSJ
Length = 241
Score = 73.9 bits (180), Expect = 5e-12
Identities = 47/127 (37%), Positives = 71/127 (55%), Gaps = 7/127 (5%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
+AVA S +KEVDV LSARGG+ + G K + E+T++T R+GV+R E+ + YA+ID
Sbjct: 106 RAVAKHSQLVKEVDVRLSARGGEL-SRGPKICRCEITLFTKRHGVIRAEEDAESTYASID 164
Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKE-------DVDEEDFQEYLKEVKMDTQLFD 341
L I+ KL+KIKEK G P D +++D Q LK+++ D
Sbjct: 165 LASSIIKRKLRKIKEKETDVRHLKGTKPPVSDWPPSLLDNNDDDAQAQLKDLEEAVGAED 224
Query: 342 KEEQLQR 362
++ L +
Sbjct: 225 EDTVLTK 231
[22][TOP]
>UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum
RepID=C9EFD1_SOLTU
Length = 280
Score = 73.9 bits (180), Expect = 5e-12
Identities = 49/146 (33%), Positives = 81/146 (55%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
KAV SH +EVDV LS RGG+ G G K ++ EVT++T ++GV+R E+ ++Y +ID
Sbjct: 82 KAVQKHSHLAREVDVRLSVRGGELGK-GPKIRRCEVTLFTKKHGVIRAEEDAESIYGSID 140
Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQR 362
+V I+ KL+KIKEK G + D E + V+ D + +EE+++
Sbjct: 141 MVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPE-----VLLVQEDLETLPQEEEVED 195
Query: 363 QFAELNRIYPANVMRSKTVVLDPITV 440
+ + + V+R K+ + P++V
Sbjct: 196 D--DKSDGFVTEVVRKKSFDMPPLSV 219
[23][TOP]
>UniRef100_A9PJW3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
Populus deltoides RepID=A9PJW3_9ROSI
Length = 268
Score = 72.4 bits (176), Expect = 1e-11
Identities = 45/119 (37%), Positives = 68/119 (57%), Gaps = 14/119 (11%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
KAV SH ++ VDV LS RGG+ G G + ++ EVT++T R+GVVR E+ +YA+ID
Sbjct: 110 KAVQKSSHLVRGVDVRLSVRGGELGK-GPRIRRCEVTLFTKRHGVVRAEEDAETIYASID 168
Query: 183 LVCDKIRAKLQKIKEKAISRGAW-----------PGRAGPKEDVDE---EDFQEYLKEV 317
L I+ KL+KIK+K G P ++D DE ++ ++Y++EV
Sbjct: 169 LASSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMHQVVEDDADEVSQQEDEDYIEEV 227
[24][TOP]
>UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR
Length = 231
Score = 71.6 bits (174), Expect = 2e-11
Identities = 48/146 (32%), Positives = 78/146 (53%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
KAV SH ++ VDV LS RGG+ G G + ++ EVT++T R+GVVR E+ ++A+ID
Sbjct: 35 KAVQKSSHLVRGVDVRLSVRGGELGK-GPRIRRCEVTLFTKRHGVVRAEEDAETIHASID 93
Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQR 362
LV I+ KL+KIK+K G + + +E + +V ++ + +Q
Sbjct: 94 LVSSIIQRKLRKIKDKESDHGR------HMKGFNRLKVREPMHQVVVEDDADEVSQQEDE 147
Query: 363 QFAELNRIYPANVMRSKTVVLDPITV 440
+ E V+R+K + P+TV
Sbjct: 148 DYIE-------EVVRTKYFDMPPLTV 166
[25][TOP]
>UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
RepID=A9PHY3_POPTR
Length = 306
Score = 71.6 bits (174), Expect = 2e-11
Identities = 48/146 (32%), Positives = 78/146 (53%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
KAV SH ++ VDV LS RGG+ G G + ++ EVT++T R+GVVR E+ ++A+ID
Sbjct: 110 KAVQKSSHLVRGVDVRLSVRGGELGK-GPRIRRCEVTLFTKRHGVVRAEEDAETIHASID 168
Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQR 362
LV I+ KL+KIK+K G + + +E + +V ++ + +Q
Sbjct: 169 LVSSIIQRKLRKIKDKESDHGR------HMKGFNRLKVREPMHQVVVEDDADEVSQQEDE 222
Query: 363 QFAELNRIYPANVMRSKTVVLDPITV 440
+ E V+R+K + P+TV
Sbjct: 223 DYIE-------EVVRTKYFDMPPLTV 241
[26][TOP]
>UniRef100_B9NF07 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NF07_POPTR
Length = 127
Score = 61.2 bits (147), Expect = 3e-08
Identities = 34/77 (44%), Positives = 47/77 (61%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
KAV FSH ++EVD LS RGG+ G + I R+GVVR E+ +YA ID
Sbjct: 17 KAVQKFSHLVREVDARLSVRGGELGKGPR--------IRKCRHGVVRAEEDSETIYATID 68
Query: 183 LVCDKIRAKLQKIKEKA 233
LV I++KL+K+KE++
Sbjct: 69 LVLSIIQSKLRKMKEES 85
[27][TOP]
>UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1
RepID=Q8DKM6_THEEB
Length = 209
Score = 60.5 bits (145), Expect = 6e-08
Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 1/77 (1%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAI 179
+A ++F + + EVDV LS AR T +Q EVT++ + V+R E++ NLYA+I
Sbjct: 26 RATSHFQNVINEVDVHLSVARNRSTAP----KQTAEVTVF-VNGSVIRAEESSENLYASI 80
Query: 180 DLVCDKIRAKLQKIKEK 230
DLV DKI KL+K+KEK
Sbjct: 81 DLVADKIARKLRKLKEK 97
[28][TOP]
>UniRef100_B0A7Y1 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM
16795 RepID=B0A7Y1_9CLOT
Length = 187
Score = 60.1 bits (144), Expect = 8e-08
Identities = 32/71 (45%), Positives = 45/71 (63%)
Frame = +3
Query: 18 FSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCDK 197
+ H EV VT+SAR K +QK+EVTI + ++R ED+E NLYAAID+V DK
Sbjct: 36 YLHEDTEVKVTVSAR--------KAKQKIEVTIIPINGPIIRAEDSEENLYAAIDVVYDK 87
Query: 198 IRAKLQKIKEK 230
+ +L++ K K
Sbjct: 88 LNKQLRRYKNK 98
[29][TOP]
>UniRef100_B6G1P8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM
13275 RepID=B6G1P8_9CLOT
Length = 190
Score = 59.3 bits (142), Expect = 1e-07
Identities = 40/106 (37%), Positives = 59/106 (55%)
Frame = +3
Query: 36 EVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCDKIRAKLQ 215
EV VT+SA GK QKVEV I + +RVE+ ++NLY AIDLVCDK+ ++
Sbjct: 44 EVKVTVSA--------GKNRQKVEVMIPNVNGHTIRVEEEQDNLYPAIDLVCDKLSRQII 95
Query: 216 KIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQ 353
K K+K +R PG + + EE QE EV+ + ++ ++
Sbjct: 96 KYKDKFKTR--VPGNFSIRYEGIEELAQELDYEVEEPEVVIERRKK 139
[30][TOP]
>UniRef100_UPI00017F5F53 putative RNA-binding protein n=1 Tax=Clostridium difficile
QCD-23m63 RepID=UPI00017F5F53
Length = 183
Score = 58.9 bits (141), Expect = 2e-07
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +3
Query: 15 NFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCD 194
N+ H +V VT+SAR K QK+EVTI T+ ++R ED + NLY AID+V D
Sbjct: 29 NYIHPDTDVKVTVSAR--------KARQKIEVTIATVNGPIIRAEDMQENLYTAIDVVYD 80
Query: 195 KIRAKLQKIKEK 230
K+ +L+K K++
Sbjct: 81 KLSKQLKKYKKR 92
[31][TOP]
>UniRef100_C9XIR4 Putative RNA-binding protein n=3 Tax=Clostridium difficile
RepID=C9XIR4_CLODI
Length = 183
Score = 58.9 bits (141), Expect = 2e-07
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +3
Query: 15 NFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCD 194
N+ H +V VT+SAR K QK+EVTI T+ ++R ED + NLY AID+V D
Sbjct: 29 NYIHPDTDVKVTVSAR--------KARQKIEVTIATVNGPIIRAEDMQENLYTAIDVVYD 80
Query: 195 KIRAKLQKIKEK 230
K+ +L+K K++
Sbjct: 81 KLSKQLKKYKKR 92
[32][TOP]
>UniRef100_Q18CN1 Putative RNA-binding protein n=1 Tax=Clostridium difficile 630
RepID=Q18CN1_CLOD6
Length = 183
Score = 58.9 bits (141), Expect = 2e-07
Identities = 31/72 (43%), Positives = 45/72 (62%)
Frame = +3
Query: 15 NFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCD 194
N+ H +V VT+SAR K QK+EVTI T+ ++R ED + NLY AID+V D
Sbjct: 29 NYIHPDTDVKVTVSAR--------KARQKIEVTIATVNGPIIRAEDMQENLYTAIDVVYD 80
Query: 195 KIRAKLQKIKEK 230
K+ +L+K K++
Sbjct: 81 KLSKQLKKYKKR 92
[33][TOP]
>UniRef100_UPI00017F60C6 putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
QCD-23m63 RepID=UPI00017F60C6
Length = 185
Score = 58.5 bits (140), Expect = 2e-07
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +3
Query: 36 EVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCDKIRAKLQ 215
EV VT+SA+ K QKVEVTI + ++R ED E++LYAAID+VCDK+ ++
Sbjct: 36 EVKVTVSAK--------KDRQKVEVTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVV 87
Query: 216 KIKEK 230
K K K
Sbjct: 88 KYKTK 92
[34][TOP]
>UniRef100_UPI00017F5ACC putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
ATCC 43255 RepID=UPI00017F5ACC
Length = 185
Score = 58.5 bits (140), Expect = 2e-07
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +3
Query: 36 EVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCDKIRAKLQ 215
EV VT+SA+ K QKVEVTI + ++R ED E++LYAAID+VCDK+ ++
Sbjct: 36 EVKVTVSAK--------KDRQKVEVTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVV 87
Query: 216 KIKEK 230
K K K
Sbjct: 88 KYKTK 92
[35][TOP]
>UniRef100_C9XLM7 Putative sigma 54 modulation protein n=3 Tax=Clostridium difficile
RepID=C9XLM7_CLODI
Length = 187
Score = 58.5 bits (140), Expect = 2e-07
Identities = 31/65 (47%), Positives = 42/65 (64%)
Frame = +3
Query: 36 EVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCDKIRAKLQ 215
EV VT+SA+ K QKVEVTI + ++R ED E++LYAAID+VCDK+ ++
Sbjct: 36 EVKVTVSAK--------KDRQKVEVTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVV 87
Query: 216 KIKEK 230
K K K
Sbjct: 88 KYKTK 92
[36][TOP]
>UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7
Length = 207
Score = 58.2 bits (139), Expect = 3e-07
Identities = 42/98 (42%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKE--QKVEVTIYTLRNG-VVRVEDAENNLYA 173
KAV+++ L E+DV LS H K Q EVTIY NG V+R E+ NLYA
Sbjct: 26 KAVSHYQSFLTEIDVHLSV-----AKHAKSNPRQTAEVTIYA--NGTVIRAEECNENLYA 78
Query: 174 AIDLVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDE 287
+IDLV DKI +L+K KEK R G+ E D+
Sbjct: 79 SIDLVSDKITRQLKKYKEKLRDR---KGQLSTAETADQ 113
[37][TOP]
>UniRef100_B7KLI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7424 RepID=B7KLI5_CYAP7
Length = 199
Score = 58.2 bits (139), Expect = 3e-07
Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179
KAV +F +VDV LS + + K EVT+Y NG V+R ++ NLYA+I
Sbjct: 26 KAVKHFQTLTTKVDVHLSVA---KNARIQNKHKAEVTVYA--NGTVIRAQEGSENLYASI 80
Query: 180 DLVCDKIRAKLQKIKEKAISRGAW-PGRAGPKEDVDEEDFQEYL 308
DLV DKI +L+K KE+ + + A P +AG E V +E +E L
Sbjct: 81 DLVSDKIARQLRKYKERKLEQNAHSPVKAG--EVVQQETIEENL 122
[38][TOP]
>UniRef100_Q00W70 Chloroplast-specific ribosomal protein (ISS) n=1 Tax=Ostreococcus
tauri RepID=Q00W70_OSTTA
Length = 184
Score = 58.2 bits (139), Expect = 3e-07
Identities = 39/99 (39%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Frame = +3
Query: 21 SHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCDKI 200
S ++EVDV SARGG+ G+ G E K EVT+ R + + NLYA ID D +
Sbjct: 82 SRDIREVDVRCSARGGE-GSKGGVEHKTEVTVLMTRGPTLHADGVGENLYATIDQCADIV 140
Query: 201 RAKLQKIKEKAISRGAWPGR--AGPK------EDVDEED 293
++K KEK +GA A PK EDVD +D
Sbjct: 141 TRSIRKHKEKHGGKGARHAAHDASPKEALLDAEDVDGDD 179
[39][TOP]
>UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB
Length = 190
Score = 57.4 bits (137), Expect = 5e-07
Identities = 52/147 (35%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179
+AV++F+ EVDV LS Q EVT+Y NG V+R E++ NLYA+I
Sbjct: 27 RAVSHFAQITSEVDVNLSVA---RNPRISASQSAEVTVYA--NGTVIRAEESSENLYASI 81
Query: 180 DLVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQ 359
D V DK+ KL+K KE+ G R PK V + T + E Q
Sbjct: 82 DRVADKLARKLRKYKER---NGIHRVRHTPKTSVAVAQ--------QPVTDPLNTERQ-- 128
Query: 360 RQFAELNRIYPANVMRSKTVVLDPITV 440
AEL PA V+R+K + P+TV
Sbjct: 129 ---AEL----PAEVVRTKYFAMPPMTV 148
[40][TOP]
>UniRef100_P47908 Light repressed protein A n=1 Tax=Synechococcus sp. PCC 7002
RepID=LRTA_SYNP2
Length = 193
Score = 57.4 bits (137), Expect = 5e-07
Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 1/147 (0%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179
KA +F +VDV LS T + K EVT+Y NG V+R ++ NLYA+I
Sbjct: 26 KATKHFQTFATKVDVHLSVANNARITD---KHKAEVTVYA--NGTVIRAQEGSENLYASI 80
Query: 180 DLVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQ 359
DLV DKI +L+K KEK G K V E+ + ++ D + D+ +L
Sbjct: 81 DLVSDKIARQLRKYKEK---------NFGKKTHVQEKTSEVLPEDPVPDNLIGDRAPEL- 130
Query: 360 RQFAELNRIYPANVMRSKTVVLDPITV 440
P+ V+R K + P+T+
Sbjct: 131 ----------PSEVVRMKYFAMPPMTI 147
[41][TOP]
>UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120
RepID=Q8YSA5_ANASP
Length = 213
Score = 57.0 bits (136), Expect = 6e-07
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAI 179
KAV +F + EVDV LS AR T Q EVTIY V+R E++ NLYA+I
Sbjct: 26 KAVNHFQNITNEVDVHLSVARNPRINTR----QAAEVTIYA-NGSVIRAEESSENLYASI 80
Query: 180 DLVCDKIRAKLQKIKEK 230
DLV DKI +L+K KE+
Sbjct: 81 DLVADKISRQLRKYKER 97
[42][TOP]
>UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT
Length = 213
Score = 57.0 bits (136), Expect = 6e-07
Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAI 179
KAV +F + EVDV LS AR T Q EVTIY V+R E++ NLYA+I
Sbjct: 26 KAVNHFQNITNEVDVHLSVARNPRINTR----QAAEVTIYA-NGSVIRAEESSENLYASI 80
Query: 180 DLVCDKIRAKLQKIKEK 230
DLV DKI +L+K KE+
Sbjct: 81 DLVADKISRQLRKYKER 97
[43][TOP]
>UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4
Length = 209
Score = 57.0 bits (136), Expect = 6e-07
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 1/147 (0%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
KA +F + E+DV LS +Q EVTIYT V+R E++ NLYA+ID
Sbjct: 26 KAANHFQNLTTEIDVHLSVA---RNPRINPKQTAEVTIYT-NGSVIRAEESSENLYASID 81
Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLF-DKEEQLQ 359
LV DKI +L+K KE+ ++D +E + V + T L D+ +L
Sbjct: 82 LVSDKIARQLRKFKER-------------RQDKHSRSKEEPVVSVPLVTDLTGDRTPEL- 127
Query: 360 RQFAELNRIYPANVMRSKTVVLDPITV 440
P V+R+K + P+T+
Sbjct: 128 ----------PEEVVRTKYFAMPPMTL 144
[44][TOP]
>UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA
Length = 212
Score = 57.0 bits (136), Expect = 6e-07
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179
KAV++F EVDV LS Q EVTIY NG V+R +++ NLYA+I
Sbjct: 26 KAVSHFQQLTNEVDVHLSVA---RNPRINPRQTAEVTIYA--NGTVIRAQESSENLYASI 80
Query: 180 DLVCDKIRAKLQKIKEKAISR 242
DLV DKI +L+K KEK +++
Sbjct: 81 DLVADKIARQLRKYKEKRMAK 101
[45][TOP]
>UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus
PCC 6301 RepID=Q5N179_SYNP6
Length = 207
Score = 56.6 bits (135), Expect = 8e-07
Identities = 41/98 (41%), Positives = 53/98 (54%), Gaps = 3/98 (3%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKE--QKVEVTIYTLRNG-VVRVEDAENNLYA 173
KAV+++ L E+DV LS H K Q EVTIY NG V+R E+ NLYA
Sbjct: 26 KAVSHYQSFLTEIDVHLSV-----AKHAKSNPRQTAEVTIYA--NGTVIRAEECNENLYA 78
Query: 174 AIDLVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDE 287
+IDLV DKI +L+K KE+ R G+ E D+
Sbjct: 79 SIDLVSDKITRQLKKYKEELRDR---KGQLSTAETADQ 113
[46][TOP]
>UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE
Length = 224
Score = 56.6 bits (135), Expect = 8e-07
Identities = 47/146 (32%), Positives = 68/146 (46%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
KA A+F + +VDV LS + +Q EVT++ L N VVR E++ +LYA+ID
Sbjct: 26 KATAHFQTLINKVDVCLSVQNNPRIA---PKQTAEVTVF-LNNVVVRAEESSESLYASID 81
Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQR 362
+V DK+ +L+K KEK R V D + + + D E L
Sbjct: 82 MVTDKLTRQLRKYKEKR--------RDQDHATVRPTDVDATINAPDITSHNADISEVLNH 133
Query: 363 QFAELNRIYPANVMRSKTVVLDPITV 440
Q P V+RSK + P+TV
Sbjct: 134 Q-----PKLPDTVVRSKYFAMPPMTV 154
[47][TOP]
>UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP
Length = 213
Score = 56.6 bits (135), Expect = 8e-07
Identities = 34/76 (44%), Positives = 46/76 (60%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
KAV++F + EVDV LS T +Q EVTI+ V+R E++ NLYA+ID
Sbjct: 26 KAVSHFQNITNEVDVHLSVARNPRIT---TKQAAEVTIFA-NGSVIRAEESSENLYASID 81
Query: 183 LVCDKIRAKLQKIKEK 230
LV DKI +L+K KE+
Sbjct: 82 LVADKIARQLRKYKER 97
[48][TOP]
>UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
JA-3-3Ab RepID=Q2JS19_SYNJA
Length = 191
Score = 55.8 bits (133), Expect = 1e-06
Identities = 53/147 (36%), Positives = 70/147 (47%), Gaps = 1/147 (0%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179
+AV +F+ EVDV LS Q EVT+Y NG V+R E++ NLYA+I
Sbjct: 27 RAVKHFAQITSEVDVNLSVA---RNPRISANQSAEVTVYA--NGTVIRAEESSENLYASI 81
Query: 180 DLVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQ 359
D V DK+ KL+K KE+ G R PK V Q+ L T + E Q
Sbjct: 82 DRVADKLARKLRKYKER---NGVHRIRHSPKTSVAVA--QQPL------TDPLNTERQ-- 128
Query: 360 RQFAELNRIYPANVMRSKTVVLDPITV 440
AEL P V+R+K + P+TV
Sbjct: 129 ---AEL----PPEVVRTKYFAMPPMTV 148
[49][TOP]
>UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc
punctiforme PCC 73102 RepID=B2IVM1_NOSP7
Length = 214
Score = 55.8 bits (133), Expect = 1e-06
Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAI 179
KA ++F EVDV LS AR T Q EVTIY V+R E++ NLYA+I
Sbjct: 26 KAASHFQSITNEVDVHLSVARNPRINTR----QAAEVTIYA-NGSVIRAEESSENLYASI 80
Query: 180 DLVCDKIRAKLQKIKEK 230
DLV DKI +L+K KE+
Sbjct: 81 DLVADKIARQLRKYKER 97
[50][TOP]
>UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO
Length = 199
Score = 55.8 bits (133), Expect = 1e-06
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAI 179
KAV +F +VDV LS A+ G + + K EVT+Y V+R ++ NLYA+I
Sbjct: 26 KAVKHFQAITTKVDVHLSVAKNGRV----QNKHKAEVTVYA-NGAVIRAQEGSENLYASI 80
Query: 180 DLVCDKIRAKLQKIKEKAISRGAW 251
DLV DKI +L+K KE+ + + A+
Sbjct: 81 DLVSDKIARQLRKYKERRLEQKAY 104
[51][TOP]
>UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI
Length = 215
Score = 55.5 bits (132), Expect = 2e-06
Identities = 37/81 (45%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179
KAV +F EVDV LS +Q EVTIY NG V+R +++ NLYA+I
Sbjct: 26 KAVNHFQQLTTEVDVHLSVA---RNPRINPKQTAEVTIYA--NGTVIRAQESSENLYASI 80
Query: 180 DLVCDKIRAKLQKIKEKAISR 242
DLV DKI +L+K KEK S+
Sbjct: 81 DLVADKIARQLRKYKEKRQSK 101
[52][TOP]
>UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1
Tax=Microcoleus chthonoplastes PCC 7420
RepID=B4VJW0_9CYAN
Length = 215
Score = 55.5 bits (132), Expect = 2e-06
Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAI 179
KAV +F + EVDV LS AR T +Q EVTIY + V+R +++ +LYA+I
Sbjct: 26 KAVNHFQNMTTEVDVHLSVARNPRINT----KQTAEVTIYANKT-VIRAQESSEDLYASI 80
Query: 180 DLVCDKIRAKLQKIKEK 230
DLV DKI+ +L+K KEK
Sbjct: 81 DLVADKIQRQLRKYKEK 97
[53][TOP]
>UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017
RepID=B0CDL4_ACAM1
Length = 212
Score = 54.7 bits (130), Expect = 3e-06
Identities = 32/81 (39%), Positives = 48/81 (59%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182
KA ++ + E+DV LS T +Q EVT++ + V+R E++ NLYA+ID
Sbjct: 26 KAANHYQNLTTEIDVHLSVARNPRIT---TKQTAEVTLF-VNGSVIRAEESSENLYASID 81
Query: 183 LVCDKIRAKLQKIKEKAISRG 245
LV DKI +L+K KEK ++G
Sbjct: 82 LVADKIARQLRKYKEKRQTKG 102
[54][TOP]
>UniRef100_A8YEZ8 LrtA protein n=1 Tax=Microcystis aeruginosa PCC 7806
RepID=A8YEZ8_MICAE
Length = 199
Score = 54.7 bits (130), Expect = 3e-06
Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 2/148 (1%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179
KAV +F+ +VDV LS + K EVT+Y NG V+R ++ NLYA+I
Sbjct: 26 KAVKHFNGITTKVDVHLSV---EKNARIPDRHKAEVTVYA--NGTVIRAQEGSENLYASI 80
Query: 180 DLVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLF-DKEEQL 356
DLV DKI +L+K KE+ + E ++E +D L D+ +L
Sbjct: 81 DLVSDKIARQLRKYKERLVDH----------RTHSTVKTSEVVQEKPLDDNLIGDRTPEL 130
Query: 357 QRQFAELNRIYPANVMRSKTVVLDPITV 440
PA V+R K + P+T+
Sbjct: 131 -----------PAEVVRMKYFAMPPMTI 147
[55][TOP]
>UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC
6803 RepID=LRTA_SYNY3
Length = 191
Score = 54.3 bits (129), Expect = 4e-06
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 1/147 (0%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179
+AV +F + +VDV LS T+ + K EVT+Y NG V+R ++ NLYA+I
Sbjct: 26 RAVKHFQNLTTKVDVHLSVARNARITN---KHKAEVTVYA--NGTVIRAQEGSENLYASI 80
Query: 180 DLVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQ 359
DLV DKI +L+K KE+ + G E V+++ +E L + D+ +L
Sbjct: 81 DLVADKIARQLRKYKERI--QDKQHGNVKTSEIVEDKPVEENL--------IGDRAPEL- 129
Query: 360 RQFAELNRIYPANVMRSKTVVLDPITV 440
P+ V+R K + P+ +
Sbjct: 130 ----------PSEVLRMKYFAMPPMAI 146
[56][TOP]
>UniRef100_UPI0001B4E6E7 oxidoreductase n=1 Tax=Streptomyces lividans TK24
RepID=UPI0001B4E6E7
Length = 400
Score = 53.9 bits (128), Expect = 5e-06
Identities = 45/135 (33%), Positives = 57/135 (42%), Gaps = 2/135 (1%)
Frame = +1
Query: 10 LPTSRTRSRRWTSRCPLAAATPAPTARRSRR*R*PFTRCATAWCAWRMRRTTCTLPSIWF 189
LP SR RS T P A P P A P+ RCA RR C+ S W
Sbjct: 210 LPHSRLRSSGGTPIAPSTPAAPTPQASHRWATSSPYRRCARPGTPGGSRRPRCS--SAWT 267
Query: 190 ATRSAPSSRRSRRRPSAAAPG-PAAPAPRRTWMRRTSRSTSRRS-RWTLSCLTRRSSCSA 363
AT PS +R R S + G PA+ P RTW + + S RW T + S+
Sbjct: 268 AT--VPSGPTARGRRSTRSSGAPASARPSRTWRPSACAAGAGTSPRWARRPRTSHACTSS 325
Query: 364 SSPS*TASTPPTSCA 408
++ + A PP S A
Sbjct: 326 ATATGPAPPPPPSSA 340
[57][TOP]
>UniRef100_UPI0000E7FCDE PREDICTED: frizzled homolog 8 (Drosophila) n=1 Tax=Gallus gallus
RepID=UPI0000E7FCDE
Length = 275
Score = 53.9 bits (128), Expect = 5e-06
Identities = 51/162 (31%), Positives = 65/162 (40%), Gaps = 18/162 (11%)
Frame = +1
Query: 4 RPLPTSRTRSRRWTSRCPLAAATPAPTARRSRR*R*PFTRCATAWCAWRMRRTTCTLPSI 183
RP S + RR R + A+P PT CA C R T S
Sbjct: 53 RPAAASASGPRRAARRSCASTASPGPTG------------CAATGCRSRAAPTR----SA 96
Query: 184 WFATRSAPSSRRSRRRPSA---AAPGPAA-----------PAPRRTWMRRTSRSTSRRSR 321
W T +AP+S R RRRP + AAPGPAA P PR RR + + +R
Sbjct: 97 W--TTTAPTSPRPRRRPPSPPSAAPGPAAPPGRPPRPPPRPRPRPRARRRPASRAASAAR 154
Query: 322 WTLSCLTRRSSCSASSPS*TASTPPTSCAPRP----WCSTPS 435
C T + C+ TA T P+SC+ W S P+
Sbjct: 155 LWCRCPTSGTRCT------TAPTTPSSCSSTSCAWWWASPPA 190
[58][TOP]
>UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106
RepID=A0YIH4_9CYAN
Length = 212
Score = 53.9 bits (128), Expect = 5e-06
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179
KAV+++ EVDV LS +Q EVTIY NG V+R +++ NLYA+I
Sbjct: 26 KAVSHYQQLTNEVDVHLSIA---RNPRINPKQTAEVTIYA--NGTVIRAQESSENLYASI 80
Query: 180 DLVCDKIRAKLQKIKEK 230
DLV DKI +L+K K+K
Sbjct: 81 DLVADKIARQLRKFKDK 97
[59][TOP]
>UniRef100_B0JSS1 Light repressed protein A homolog n=1 Tax=Microcystis aeruginosa
NIES-843 RepID=B0JSS1_MICAN
Length = 199
Score = 53.5 bits (127), Expect = 7e-06
Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179
KAV +F+ +VDV LS + + EVT+Y NG V+R ++ NLYA+I
Sbjct: 26 KAVKHFNGITTKVDVHLSV---EKNARIPDRHRAEVTVYA--NGTVIRAQEGSENLYASI 80
Query: 180 DLVCDKIRAKLQKIKEKAIS-RGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLF-DKEEQ 353
DLV DKI +L+K KE+ + R P + E ++E +D L D+ +
Sbjct: 81 DLVSDKIARQLRKYKERLVDHRTNAPVKT-----------SEVVQEKPLDGSLIGDRTPE 129
Query: 354 LQRQFAELNRIYPANVMRSKTVVLDPITV 440
L PA V+R K + P+T+
Sbjct: 130 L-----------PAEVVRMKYFAMPPMTI 147
[60][TOP]
>UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc
azollae' 0708 RepID=B9YPU1_ANAAZ
Length = 214
Score = 53.5 bits (127), Expect = 7e-06
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +3
Query: 3 KAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAI 179
+AV +F EV+V LS AR T +Q EVTIY V+R E++ NLYA+I
Sbjct: 26 RAVNHFQSITNEVNVHLSVARNPRIST----KQAAEVTIYA-NGSVIRAEESSENLYASI 80
Query: 180 DLVCDKIRAKLQKIKEK 230
DLV DKI +L+K KE+
Sbjct: 81 DLVADKIARQLRKYKER 97