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[1][TOP] >UniRef100_A8J8B2 Plastid-specific ribosomal protein 1 n=1 Tax=Chlamydomonas reinhardtii RepID=A8J8B2_CHLRE Length = 286 Score = 285 bits (730), Expect = 8e-76 Identities = 146/147 (99%), Positives = 146/147 (99%), Gaps = 1/147 (0%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID Sbjct: 95 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 154 Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQR 362 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQR Sbjct: 155 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQR 214 Query: 363 QFAELNRIYPANVMRSKTVVL-DPITV 440 QFAELNRIYPANVMRSKTVVL DPITV Sbjct: 215 QFAELNRIYPANVMRSKTVVLADPITV 241 [2][TOP] >UniRef100_Q5MCR1 Chloroplast-specific ribosome-associated protein n=1 Tax=Volvox carteri f. nagariensis RepID=Q5MCR1_VOLCA Length = 232 Score = 167 bits (423), Expect = 3e-40 Identities = 79/110 (71%), Positives = 96/110 (87%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 KA+ NF+HTLKEVDVTLSARGGDTGTHGKKEQKV+VTI+TLRNGVVRVED E+NLYAAID Sbjct: 99 KAIQNFAHTLKEVDVTLSARGGDTGTHGKKEQKVDVTIFTLRNGVVRVEDRESNLYAAID 158 Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQ 332 LVCDKIR+KL ++KEKAI++G WPG+AGPKE+V+ + +++TQ Sbjct: 159 LVCDKIRSKLTRVKEKAITKGKWPGKAGPKENVEGRRTSKSTSRCQVETQ 208 [3][TOP] >UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO Length = 284 Score = 85.1 bits (209), Expect = 2e-15 Identities = 51/124 (41%), Positives = 75/124 (60%), Gaps = 2/124 (1%) Frame = +3 Query: 3 KAVANFS-HTLKEVDVTLSARGG-DTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAA 176 KAVA+F H ++EVDV S+RGG D T G QK EVT+YT RNG++R E+ ++LYA+ Sbjct: 105 KAVAHFDQHDVREVDVRCSSRGGADKKTPGGALQKTEVTVYT-RNGIIRSEEEADDLYAS 163 Query: 177 IDLVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQL 356 ID V DK+ KL+K+KEK IS+ + PK D + + + + D +E + Sbjct: 164 IDAVSDKLERKLRKVKEKKISKRPKHNKNAPKAQTDAIVEEMQAADEALADESMDYDEVV 223 Query: 357 QRQF 368 + +F Sbjct: 224 REKF 227 [4][TOP] >UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum bicolor RepID=C5WRX8_SORBI Length = 310 Score = 79.0 bits (193), Expect = 2e-13 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 2/148 (1%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 +AV+ H ++EVDV LSARGG+ G G K + E+T+++ R+GV+R E+ + YA+ID Sbjct: 97 RAVSKHCHLVREVDVRLSARGGELG-RGPKTSRCEITLFSKRHGVLRAEEDAESTYASID 155 Query: 183 LVCDKIRAKLQKIKEK--AISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQL 356 L I+ KL+KIKEK + R G G E+ + +D L + +E Sbjct: 156 LAAAIIKRKLRKIKEKETEVRRDGDGGAGGAWEE----------ELPLLDDDLVEADELA 205 Query: 357 QRQFAELNRIYPANVMRSKTVVLDPITV 440 AE + A V+R+K + P+TV Sbjct: 206 AAVGAEDEQTVVAKVVRTKVFEMPPLTV 233 [5][TOP] >UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1 Tax=Ricinus communis RepID=B9SEK8_RICCO Length = 311 Score = 79.0 bits (193), Expect = 2e-13 Identities = 51/130 (39%), Positives = 74/130 (56%), Gaps = 17/130 (13%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 KAV SH ++EVDV LS RGG+ G G K ++ EVT++T ++GV+R E+ +YA+ID Sbjct: 113 KAVQKHSHLVREVDVRLSVRGGEFGK-GPKIRRCEVTLFTKKHGVIRAEEDAETIYASID 171 Query: 183 LVCDKIRAKLQKIKEKAISRGAW-----------PGRAGPKEDVDE------EDFQEYLK 311 LV I+ KL+KIKEK G P K+D DE ++ ++Y+ Sbjct: 172 LVSSIIQRKLRKIKEKVSDHGRHMKGFNRLKVREPVAEPVKDDTDEVDGVLGDEDEDYID 231 Query: 312 EVKMDTQLFD 341 EV + T+ FD Sbjct: 232 EV-VRTKYFD 240 [6][TOP] >UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea RepID=RR30_SPIOL Length = 302 Score = 79.0 bits (193), Expect = 2e-13 Identities = 41/81 (50%), Positives = 58/81 (71%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 K+VA SH ++EVDV LSARGGD + G K ++ EVT++T R+GV+R E+ +LY++ID Sbjct: 100 KSVAKHSHLVREVDVRLSARGGDL-SKGPKLRRCEVTLFTKRHGVIRAEEDAESLYSSID 158 Query: 183 LVCDKIRAKLQKIKEKAISRG 245 LV I+ KL+KIK+K G Sbjct: 159 LVSSIIQRKLRKIKDKVSDHG 179 [7][TOP] >UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TA00_PHYPA Length = 297 Score = 77.8 bits (190), Expect = 3e-13 Identities = 54/143 (37%), Positives = 83/143 (58%) Frame = +3 Query: 6 AVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDL 185 AV N S +KEVDV +S RGG+TG G++ Q+ EVT++T ++GVVR E+ ++YA+ID Sbjct: 114 AVHNQSALVKEVDVRMSVRGGETG-RGERLQRCEVTLFTKKHGVVRAEEEAESMYASIDR 172 Query: 186 VCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQRQ 365 V D I KL+KIKEK G P + P+ + EV + ++ D + L+R+ Sbjct: 173 VSDVISRKLRKIKEKDGGHGR-PAKYSPR-----------IGEV-LSNEVVDLDPILERK 219 Query: 366 FAELNRIYPANVMRSKTVVLDPI 434 +L P V+R+K + P+ Sbjct: 220 PDDL----PDEVVRTKYFEMRPM 238 [8][TOP] >UniRef100_C1N7A9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N7A9_9CHLO Length = 245 Score = 77.4 bits (189), Expect = 5e-13 Identities = 48/91 (52%), Positives = 60/91 (65%), Gaps = 1/91 (1%) Frame = +3 Query: 3 KAVANFS-HTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAI 179 KAV++F H ++EVDVT SAR G Q +VT+YT RNGVVR E+ +NLYA+I Sbjct: 71 KAVSHFDMHDVREVDVTCSARSEKQ--QGGDLQMTQVTVYT-RNGVVRSEEEADNLYASI 127 Query: 180 DLVCDKIRAKLQKIKEKAISRGAWPGRAGPK 272 D V DKI KL+KIKEK S+ A +A PK Sbjct: 128 DAVSDKIERKLRKIKEKKNSKKAGKTKANPK 158 [9][TOP] >UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR Length = 306 Score = 77.0 bits (188), Expect = 6e-13 Identities = 48/127 (37%), Positives = 73/127 (57%), Gaps = 14/127 (11%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 KAV SH ++EVDV LS RGG+ G G + ++ EVT++T R+GVVR E+ +YA+ID Sbjct: 111 KAVQKHSHLVREVDVRLSVRGGELGK-GPRIRRCEVTLFTNRHGVVRAEEDAETIYASID 169 Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGR--------------AGPKEDVDEEDFQEYLKEVK 320 LV I+ KL+KIKEK G G ++V +++ ++ ++EV Sbjct: 170 LVSSIIQRKLRKIKEKESDHGRHMKGFNRLKVREPVPQVVEGDADEVSQQEVEDSIEEV- 228 Query: 321 MDTQLFD 341 + T+ FD Sbjct: 229 VRTKFFD 235 [10][TOP] >UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis thaliana RepID=Q9FLV3_ARATH Length = 365 Score = 76.6 bits (187), Expect = 8e-13 Identities = 51/146 (34%), Positives = 81/146 (55%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 K+V SH ++EVDV LS RGG+ G G + ++ EVT++T ++GVVR E+ +YA ID Sbjct: 164 KSVQKHSHLVREVDVRLSVRGGEFGK-GPRIRRCEVTLFTKKHGVVRAEEDAETVYACID 222 Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQR 362 LV I+ KL+KIKEK G + + V E + +++V+ T EE+ + Sbjct: 223 LVSTIIQRKLRKIKEKDSDHGRHM-KGFNRLKVREPVIEPVVEDVEDSTDSSVGEEEEED 281 Query: 363 QFAELNRIYPANVMRSKTVVLDPITV 440 + ++R+KT + P+TV Sbjct: 282 DLIK-------EIVRTKTFEMPPLTV 300 [11][TOP] >UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ Length = 309 Score = 75.9 bits (185), Expect = 1e-12 Identities = 52/153 (33%), Positives = 81/153 (52%), Gaps = 7/153 (4%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 +AVA S +KEVDV LSARGG+ + G K + E+T++T R+GV+R E+ + YA+ID Sbjct: 106 RAVAKHSQLVKEVDVRLSARGGEL-SRGPKICRCEITLFTKRHGVIRAEEDAESTYASID 164 Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKE-------DVDEEDFQEYLKEVKMDTQLFD 341 L I+ KL+KIKEK G P D +++D Q LK+++ D Sbjct: 165 LASSIIKRKLRKIKEKETDVRHLKGTKPPVSDWPPSLLDNNDDDAQAQLKDLEEAVGAED 224 Query: 342 KEEQLQRQFAELNRIYPANVMRSKTVVLDPITV 440 ++ L + V+R+K + P++V Sbjct: 225 EDTVLTK------------VVRTKVFEMPPLSV 245 [12][TOP] >UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum RepID=Q672Q2_SOLLC Length = 311 Score = 75.9 bits (185), Expect = 1e-12 Identities = 50/146 (34%), Positives = 81/146 (55%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 KAV SH +EVDV LS RGG+ G G K ++ EVT++T ++GV+R E+ ++Y +ID Sbjct: 110 KAVQKHSHLAREVDVRLSVRGGELGK-GPKIRRCEVTLFTKKHGVIRAEEDGESIYGSID 168 Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQR 362 +V I+ KL+KIKEK RG + D E V+ D + +EE+++ Sbjct: 169 MVSSIIQRKLRKIKEKDSDRGRHMKGFDRLKVRDPEALL-----VQEDLETLSQEEEVED 223 Query: 363 QFAELNRIYPANVMRSKTVVLDPITV 440 ++ + V+R K+ + P++V Sbjct: 224 DKSD---GFVTEVVRKKSFDMPPLSV 246 [13][TOP] >UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis RepID=B8LMC5_PICSI Length = 321 Score = 75.9 bits (185), Expect = 1e-12 Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 9/153 (5%) Frame = +3 Query: 6 AVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDL 185 AV ++ ++EVDV LS RGG+ G G K ++ EVT++T ++GVVR E+ +YA+ID+ Sbjct: 114 AVQKHANLVREVDVRLSIRGGEVGK-GPKIRRCEVTLFTKKHGVVRAEEEAETIYASIDI 172 Query: 186 VCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQ---------LF 338 V D IR KL+KIKEK G P + + E L V MD + L Sbjct: 173 VSDIIRRKLRKIKEKD------GGHGRPSKMRKQPKLGELLSTVVMDVKETRDKELDDLA 226 Query: 339 DKEEQLQRQFAELNRIYPANVMRSKTVVLDPIT 437 D EE + +L+ V+R+K + P++ Sbjct: 227 DVEEMRYEKIDDLS----DEVVRTKYFEMPPMS 255 [14][TOP] >UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RWK9_PHYPA Length = 221 Score = 75.9 bits (185), Expect = 1e-12 Identities = 41/75 (54%), Positives = 54/75 (72%) Frame = +3 Query: 6 AVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDL 185 AV N S +KEVDV +S RGG+TG GK Q+ EVT++T ++GVVR E+ ++YA+ID Sbjct: 36 AVHNQSALVKEVDVRMSVRGGETGRGGKL-QRCEVTLFTKKHGVVRAEEEAESMYASIDR 94 Query: 186 VCDKIRAKLQKIKEK 230 V D I KL+KIKEK Sbjct: 95 VSDVISRKLRKIKEK 109 [15][TOP] >UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group RepID=C6YXL0_ORYSJ Length = 321 Score = 75.5 bits (184), Expect = 2e-12 Identities = 52/152 (34%), Positives = 80/152 (52%), Gaps = 7/152 (4%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 +AVA S +KEVDV LSARGG+ + G K + E+T++T R+GV+R E+ + YA+ID Sbjct: 106 RAVAKHSQLVKEVDVRLSARGGEL-SRGPKICRCEITLFTKRHGVIRAEEDAESTYASID 164 Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKE-------DVDEEDFQEYLKEVKMDTQLFD 341 L I+ KL+KIKEK G P D +++D Q LK+++ D Sbjct: 165 LASSIIKRKLRKIKEKETDVRHLKGTKPPVSDWPPSLLDNNDDDAQAQLKDLEEAVGAED 224 Query: 342 KEEQLQRQFAELNRIYPANVMRSKTVVLDPIT 437 ++ L R V+R+K + P++ Sbjct: 225 EDTVLTR------------VVRTKVFEMPPLS 244 [16][TOP] >UniRef100_C6TFU4 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6TFU4_SOYBN Length = 208 Score = 75.1 bits (183), Expect = 2e-12 Identities = 39/81 (48%), Positives = 52/81 (64%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 KAV SH ++EVDV LS RGG G + ++ EVT++T R+GVVR E+ + Y +ID Sbjct: 95 KAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSID 154 Query: 183 LVCDKIRAKLQKIKEKAISRG 245 LV I+ KL+KIKEK G Sbjct: 155 LVSSIIQRKLRKIKEKVSDHG 175 [17][TOP] >UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max RepID=C6T7E3_SOYBN Length = 291 Score = 75.1 bits (183), Expect = 2e-12 Identities = 39/81 (48%), Positives = 52/81 (64%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 KAV SH ++EVDV LS RGG G + ++ EVT++T R+GVVR E+ + Y +ID Sbjct: 95 KAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRCEVTLFTKRHGVVRAEEDAESTYGSID 154 Query: 183 LVCDKIRAKLQKIKEKAISRG 245 LV I+ KL+KIKEK G Sbjct: 155 LVSSIIQRKLRKIKEKVSDHG 175 [18][TOP] >UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera RepID=UPI0001984F94 Length = 298 Score = 74.7 bits (182), Expect = 3e-12 Identities = 40/81 (49%), Positives = 54/81 (66%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 KAV SH ++EVDV LS RGG+ G G K ++ EVT++T ++GVVR E+ LY +ID Sbjct: 103 KAVQKHSHLVREVDVRLSIRGGELGK-GPKIRRCEVTLFTKKHGVVRAEEHAETLYGSID 161 Query: 183 LVCDKIRAKLQKIKEKAISRG 245 +V I+ KL+KIKEK G Sbjct: 162 MVSSIIQRKLRKIKEKDSDHG 182 [19][TOP] >UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays RepID=B6TYP8_MAIZE Length = 309 Score = 74.7 bits (182), Expect = 3e-12 Identities = 54/147 (36%), Positives = 79/147 (53%), Gaps = 1/147 (0%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 +AV+ H ++EVDV LSARGG+ G G K + E+T++T R+GV+R E+ + YA+ID Sbjct: 97 RAVSKHCHLVREVDVRLSARGGELG-RGPKTSRCEITLFTKRHGVLRAEEDAESTYASID 155 Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDV-DEEDFQEYLKEVKMDTQLFDKEEQLQ 359 L ++ KL+KIKEK R G + V DE + L + D D E + Sbjct: 156 LAAAIVKRKLRKIKEKETE----VRRGGDADGVWDEIPPADLLPPAEAD----DLEAAVG 207 Query: 360 RQFAELNRIYPANVMRSKTVVLDPITV 440 AE A V+R+K + P+TV Sbjct: 208 ---AEDEETVLAKVVRTKVFEMPPLTV 231 [20][TOP] >UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1 Tax=Vitis vinifera RepID=A7QEV5_VITVI Length = 230 Score = 74.7 bits (182), Expect = 3e-12 Identities = 40/81 (49%), Positives = 54/81 (66%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 KAV SH ++EVDV LS RGG+ G G K ++ EVT++T ++GVVR E+ LY +ID Sbjct: 35 KAVQKHSHLVREVDVRLSIRGGELGK-GPKIRRCEVTLFTKKHGVVRAEEHAETLYGSID 93 Query: 183 LVCDKIRAKLQKIKEKAISRG 245 +V I+ KL+KIKEK G Sbjct: 94 MVSSIIQRKLRKIKEKDSDHG 114 [21][TOP] >UniRef100_Q10AC8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative, expressed n=1 Tax=Oryza sativa Japonica Group RepID=Q10AC8_ORYSJ Length = 241 Score = 73.9 bits (180), Expect = 5e-12 Identities = 47/127 (37%), Positives = 71/127 (55%), Gaps = 7/127 (5%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 +AVA S +KEVDV LSARGG+ + G K + E+T++T R+GV+R E+ + YA+ID Sbjct: 106 RAVAKHSQLVKEVDVRLSARGGEL-SRGPKICRCEITLFTKRHGVIRAEEDAESTYASID 164 Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKE-------DVDEEDFQEYLKEVKMDTQLFD 341 L I+ KL+KIKEK G P D +++D Q LK+++ D Sbjct: 165 LASSIIKRKLRKIKEKETDVRHLKGTKPPVSDWPPSLLDNNDDDAQAQLKDLEEAVGAED 224 Query: 342 KEEQLQR 362 ++ L + Sbjct: 225 EDTVLTK 231 [22][TOP] >UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum RepID=C9EFD1_SOLTU Length = 280 Score = 73.9 bits (180), Expect = 5e-12 Identities = 49/146 (33%), Positives = 81/146 (55%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 KAV SH +EVDV LS RGG+ G G K ++ EVT++T ++GV+R E+ ++Y +ID Sbjct: 82 KAVQKHSHLAREVDVRLSVRGGELGK-GPKIRRCEVTLFTKKHGVIRAEEDAESIYGSID 140 Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQR 362 +V I+ KL+KIKEK G + D E + V+ D + +EE+++ Sbjct: 141 MVSSIIQRKLRKIKEKDSDHGRHMKGFDRLKVRDPE-----VLLVQEDLETLPQEEEVED 195 Query: 363 QFAELNRIYPANVMRSKTVVLDPITV 440 + + + V+R K+ + P++V Sbjct: 196 D--DKSDGFVTEVVRKKSFDMPPLSV 219 [23][TOP] >UniRef100_A9PJW3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x Populus deltoides RepID=A9PJW3_9ROSI Length = 268 Score = 72.4 bits (176), Expect = 1e-11 Identities = 45/119 (37%), Positives = 68/119 (57%), Gaps = 14/119 (11%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 KAV SH ++ VDV LS RGG+ G G + ++ EVT++T R+GVVR E+ +YA+ID Sbjct: 110 KAVQKSSHLVRGVDVRLSVRGGELGK-GPRIRRCEVTLFTKRHGVVRAEEDAETIYASID 168 Query: 183 LVCDKIRAKLQKIKEKAISRGAW-----------PGRAGPKEDVDE---EDFQEYLKEV 317 L I+ KL+KIK+K G P ++D DE ++ ++Y++EV Sbjct: 169 LASSIIQRKLRKIKDKESDHGRHMKGFNRLKVREPMHQVVEDDADEVSQQEDEDYIEEV 227 [24][TOP] >UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR Length = 231 Score = 71.6 bits (174), Expect = 2e-11 Identities = 48/146 (32%), Positives = 78/146 (53%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 KAV SH ++ VDV LS RGG+ G G + ++ EVT++T R+GVVR E+ ++A+ID Sbjct: 35 KAVQKSSHLVRGVDVRLSVRGGELGK-GPRIRRCEVTLFTKRHGVVRAEEDAETIHASID 93 Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQR 362 LV I+ KL+KIK+K G + + +E + +V ++ + +Q Sbjct: 94 LVSSIIQRKLRKIKDKESDHGR------HMKGFNRLKVREPMHQVVVEDDADEVSQQEDE 147 Query: 363 QFAELNRIYPANVMRSKTVVLDPITV 440 + E V+R+K + P+TV Sbjct: 148 DYIE-------EVVRTKYFDMPPLTV 166 [25][TOP] >UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa RepID=A9PHY3_POPTR Length = 306 Score = 71.6 bits (174), Expect = 2e-11 Identities = 48/146 (32%), Positives = 78/146 (53%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 KAV SH ++ VDV LS RGG+ G G + ++ EVT++T R+GVVR E+ ++A+ID Sbjct: 110 KAVQKSSHLVRGVDVRLSVRGGELGK-GPRIRRCEVTLFTKRHGVVRAEEDAETIHASID 168 Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQR 362 LV I+ KL+KIK+K G + + +E + +V ++ + +Q Sbjct: 169 LVSSIIQRKLRKIKDKESDHGR------HMKGFNRLKVREPMHQVVVEDDADEVSQQEDE 222 Query: 363 QFAELNRIYPANVMRSKTVVLDPITV 440 + E V+R+K + P+TV Sbjct: 223 DYIE-------EVVRTKYFDMPPLTV 241 [26][TOP] >UniRef100_B9NF07 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NF07_POPTR Length = 127 Score = 61.2 bits (147), Expect = 3e-08 Identities = 34/77 (44%), Positives = 47/77 (61%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 KAV FSH ++EVD LS RGG+ G + I R+GVVR E+ +YA ID Sbjct: 17 KAVQKFSHLVREVDARLSVRGGELGKGPR--------IRKCRHGVVRAEEDSETIYATID 68 Query: 183 LVCDKIRAKLQKIKEKA 233 LV I++KL+K+KE++ Sbjct: 69 LVLSIIQSKLRKMKEES 85 [27][TOP] >UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1 RepID=Q8DKM6_THEEB Length = 209 Score = 60.5 bits (145), Expect = 6e-08 Identities = 35/77 (45%), Positives = 50/77 (64%), Gaps = 1/77 (1%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAI 179 +A ++F + + EVDV LS AR T +Q EVT++ + V+R E++ NLYA+I Sbjct: 26 RATSHFQNVINEVDVHLSVARNRSTAP----KQTAEVTVF-VNGSVIRAEESSENLYASI 80 Query: 180 DLVCDKIRAKLQKIKEK 230 DLV DKI KL+K+KEK Sbjct: 81 DLVADKIARKLRKLKEK 97 [28][TOP] >UniRef100_B0A7Y1 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A7Y1_9CLOT Length = 187 Score = 60.1 bits (144), Expect = 8e-08 Identities = 32/71 (45%), Positives = 45/71 (63%) Frame = +3 Query: 18 FSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCDK 197 + H EV VT+SAR K +QK+EVTI + ++R ED+E NLYAAID+V DK Sbjct: 36 YLHEDTEVKVTVSAR--------KAKQKIEVTIIPINGPIIRAEDSEENLYAAIDVVYDK 87 Query: 198 IRAKLQKIKEK 230 + +L++ K K Sbjct: 88 LNKQLRRYKNK 98 [29][TOP] >UniRef100_B6G1P8 Putative uncharacterized protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1P8_9CLOT Length = 190 Score = 59.3 bits (142), Expect = 1e-07 Identities = 40/106 (37%), Positives = 59/106 (55%) Frame = +3 Query: 36 EVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCDKIRAKLQ 215 EV VT+SA GK QKVEV I + +RVE+ ++NLY AIDLVCDK+ ++ Sbjct: 44 EVKVTVSA--------GKNRQKVEVMIPNVNGHTIRVEEEQDNLYPAIDLVCDKLSRQII 95 Query: 216 KIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQ 353 K K+K +R PG + + EE QE EV+ + ++ ++ Sbjct: 96 KYKDKFKTR--VPGNFSIRYEGIEELAQELDYEVEEPEVVIERRKK 139 [30][TOP] >UniRef100_UPI00017F5F53 putative RNA-binding protein n=1 Tax=Clostridium difficile QCD-23m63 RepID=UPI00017F5F53 Length = 183 Score = 58.9 bits (141), Expect = 2e-07 Identities = 31/72 (43%), Positives = 45/72 (62%) Frame = +3 Query: 15 NFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCD 194 N+ H +V VT+SAR K QK+EVTI T+ ++R ED + NLY AID+V D Sbjct: 29 NYIHPDTDVKVTVSAR--------KARQKIEVTIATVNGPIIRAEDMQENLYTAIDVVYD 80 Query: 195 KIRAKLQKIKEK 230 K+ +L+K K++ Sbjct: 81 KLSKQLKKYKKR 92 [31][TOP] >UniRef100_C9XIR4 Putative RNA-binding protein n=3 Tax=Clostridium difficile RepID=C9XIR4_CLODI Length = 183 Score = 58.9 bits (141), Expect = 2e-07 Identities = 31/72 (43%), Positives = 45/72 (62%) Frame = +3 Query: 15 NFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCD 194 N+ H +V VT+SAR K QK+EVTI T+ ++R ED + NLY AID+V D Sbjct: 29 NYIHPDTDVKVTVSAR--------KARQKIEVTIATVNGPIIRAEDMQENLYTAIDVVYD 80 Query: 195 KIRAKLQKIKEK 230 K+ +L+K K++ Sbjct: 81 KLSKQLKKYKKR 92 [32][TOP] >UniRef100_Q18CN1 Putative RNA-binding protein n=1 Tax=Clostridium difficile 630 RepID=Q18CN1_CLOD6 Length = 183 Score = 58.9 bits (141), Expect = 2e-07 Identities = 31/72 (43%), Positives = 45/72 (62%) Frame = +3 Query: 15 NFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCD 194 N+ H +V VT+SAR K QK+EVTI T+ ++R ED + NLY AID+V D Sbjct: 29 NYIHPDTDVKVTVSAR--------KARQKIEVTIATVNGPIIRAEDMQENLYTAIDVVYD 80 Query: 195 KIRAKLQKIKEK 230 K+ +L+K K++ Sbjct: 81 KLSKQLKKYKKR 92 [33][TOP] >UniRef100_UPI00017F60C6 putative sigma 54 modulation protein n=1 Tax=Clostridium difficile QCD-23m63 RepID=UPI00017F60C6 Length = 185 Score = 58.5 bits (140), Expect = 2e-07 Identities = 31/65 (47%), Positives = 42/65 (64%) Frame = +3 Query: 36 EVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCDKIRAKLQ 215 EV VT+SA+ K QKVEVTI + ++R ED E++LYAAID+VCDK+ ++ Sbjct: 36 EVKVTVSAK--------KDRQKVEVTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVV 87 Query: 216 KIKEK 230 K K K Sbjct: 88 KYKTK 92 [34][TOP] >UniRef100_UPI00017F5ACC putative sigma 54 modulation protein n=1 Tax=Clostridium difficile ATCC 43255 RepID=UPI00017F5ACC Length = 185 Score = 58.5 bits (140), Expect = 2e-07 Identities = 31/65 (47%), Positives = 42/65 (64%) Frame = +3 Query: 36 EVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCDKIRAKLQ 215 EV VT+SA+ K QKVEVTI + ++R ED E++LYAAID+VCDK+ ++ Sbjct: 36 EVKVTVSAK--------KDRQKVEVTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVV 87 Query: 216 KIKEK 230 K K K Sbjct: 88 KYKTK 92 [35][TOP] >UniRef100_C9XLM7 Putative sigma 54 modulation protein n=3 Tax=Clostridium difficile RepID=C9XLM7_CLODI Length = 187 Score = 58.5 bits (140), Expect = 2e-07 Identities = 31/65 (47%), Positives = 42/65 (64%) Frame = +3 Query: 36 EVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCDKIRAKLQ 215 EV VT+SA+ K QKVEVTI + ++R ED E++LYAAID+VCDK+ ++ Sbjct: 36 EVKVTVSAK--------KDRQKVEVTIIPINGQIIRAEDVEDDLYAAIDIVCDKLSRQVV 87 Query: 216 KIKEK 230 K K K Sbjct: 88 KYKTK 92 [36][TOP] >UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7 Length = 207 Score = 58.2 bits (139), Expect = 3e-07 Identities = 42/98 (42%), Positives = 53/98 (54%), Gaps = 3/98 (3%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKE--QKVEVTIYTLRNG-VVRVEDAENNLYA 173 KAV+++ L E+DV LS H K Q EVTIY NG V+R E+ NLYA Sbjct: 26 KAVSHYQSFLTEIDVHLSV-----AKHAKSNPRQTAEVTIYA--NGTVIRAEECNENLYA 78 Query: 174 AIDLVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDE 287 +IDLV DKI +L+K KEK R G+ E D+ Sbjct: 79 SIDLVSDKITRQLKKYKEKLRDR---KGQLSTAETADQ 113 [37][TOP] >UniRef100_B7KLI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Cyanothece sp. PCC 7424 RepID=B7KLI5_CYAP7 Length = 199 Score = 58.2 bits (139), Expect = 3e-07 Identities = 42/104 (40%), Positives = 59/104 (56%), Gaps = 2/104 (1%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179 KAV +F +VDV LS + + K EVT+Y NG V+R ++ NLYA+I Sbjct: 26 KAVKHFQTLTTKVDVHLSVA---KNARIQNKHKAEVTVYA--NGTVIRAQEGSENLYASI 80 Query: 180 DLVCDKIRAKLQKIKEKAISRGAW-PGRAGPKEDVDEEDFQEYL 308 DLV DKI +L+K KE+ + + A P +AG E V +E +E L Sbjct: 81 DLVSDKIARQLRKYKERKLEQNAHSPVKAG--EVVQQETIEENL 122 [38][TOP] >UniRef100_Q00W70 Chloroplast-specific ribosomal protein (ISS) n=1 Tax=Ostreococcus tauri RepID=Q00W70_OSTTA Length = 184 Score = 58.2 bits (139), Expect = 3e-07 Identities = 39/99 (39%), Positives = 51/99 (51%), Gaps = 8/99 (8%) Frame = +3 Query: 21 SHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAIDLVCDKI 200 S ++EVDV SARGG+ G+ G E K EVT+ R + + NLYA ID D + Sbjct: 82 SRDIREVDVRCSARGGE-GSKGGVEHKTEVTVLMTRGPTLHADGVGENLYATIDQCADIV 140 Query: 201 RAKLQKIKEKAISRGAWPGR--AGPK------EDVDEED 293 ++K KEK +GA A PK EDVD +D Sbjct: 141 TRSIRKHKEKHGGKGARHAAHDASPKEALLDAEDVDGDD 179 [39][TOP] >UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp. JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB Length = 190 Score = 57.4 bits (137), Expect = 5e-07 Identities = 52/147 (35%), Positives = 70/147 (47%), Gaps = 1/147 (0%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179 +AV++F+ EVDV LS Q EVT+Y NG V+R E++ NLYA+I Sbjct: 27 RAVSHFAQITSEVDVNLSVA---RNPRISASQSAEVTVYA--NGTVIRAEESSENLYASI 81 Query: 180 DLVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQ 359 D V DK+ KL+K KE+ G R PK V + T + E Q Sbjct: 82 DRVADKLARKLRKYKER---NGIHRVRHTPKTSVAVAQ--------QPVTDPLNTERQ-- 128 Query: 360 RQFAELNRIYPANVMRSKTVVLDPITV 440 AEL PA V+R+K + P+TV Sbjct: 129 ---AEL----PAEVVRTKYFAMPPMTV 148 [40][TOP] >UniRef100_P47908 Light repressed protein A n=1 Tax=Synechococcus sp. PCC 7002 RepID=LRTA_SYNP2 Length = 193 Score = 57.4 bits (137), Expect = 5e-07 Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 1/147 (0%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179 KA +F +VDV LS T + K EVT+Y NG V+R ++ NLYA+I Sbjct: 26 KATKHFQTFATKVDVHLSVANNARITD---KHKAEVTVYA--NGTVIRAQEGSENLYASI 80 Query: 180 DLVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQ 359 DLV DKI +L+K KEK G K V E+ + ++ D + D+ +L Sbjct: 81 DLVSDKIARQLRKYKEK---------NFGKKTHVQEKTSEVLPEDPVPDNLIGDRAPEL- 130 Query: 360 RQFAELNRIYPANVMRSKTVVLDPITV 440 P+ V+R K + P+T+ Sbjct: 131 ----------PSEVVRMKYFAMPPMTI 147 [41][TOP] >UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120 RepID=Q8YSA5_ANASP Length = 213 Score = 57.0 bits (136), Expect = 6e-07 Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 1/77 (1%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAI 179 KAV +F + EVDV LS AR T Q EVTIY V+R E++ NLYA+I Sbjct: 26 KAVNHFQNITNEVDVHLSVARNPRINTR----QAAEVTIYA-NGSVIRAEESSENLYASI 80 Query: 180 DLVCDKIRAKLQKIKEK 230 DLV DKI +L+K KE+ Sbjct: 81 DLVADKISRQLRKYKER 97 [42][TOP] >UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1 Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT Length = 213 Score = 57.0 bits (136), Expect = 6e-07 Identities = 37/77 (48%), Positives = 46/77 (59%), Gaps = 1/77 (1%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAI 179 KAV +F + EVDV LS AR T Q EVTIY V+R E++ NLYA+I Sbjct: 26 KAVNHFQNITNEVDVHLSVARNPRINTR----QAAEVTIYA-NGSVIRAEESSENLYASI 80 Query: 180 DLVCDKIRAKLQKIKEK 230 DLV DKI +L+K KE+ Sbjct: 81 DLVADKISRQLRKYKER 97 [43][TOP] >UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4 Length = 209 Score = 57.0 bits (136), Expect = 6e-07 Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 1/147 (0%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 KA +F + E+DV LS +Q EVTIYT V+R E++ NLYA+ID Sbjct: 26 KAANHFQNLTTEIDVHLSVA---RNPRINPKQTAEVTIYT-NGSVIRAEESSENLYASID 81 Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLF-DKEEQLQ 359 LV DKI +L+K KE+ ++D +E + V + T L D+ +L Sbjct: 82 LVSDKIARQLRKFKER-------------RQDKHSRSKEEPVVSVPLVTDLTGDRTPEL- 127 Query: 360 RQFAELNRIYPANVMRSKTVVLDPITV 440 P V+R+K + P+T+ Sbjct: 128 ----------PEEVVRTKYFAMPPMTL 144 [44][TOP] >UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA Length = 212 Score = 57.0 bits (136), Expect = 6e-07 Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 1/81 (1%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179 KAV++F EVDV LS Q EVTIY NG V+R +++ NLYA+I Sbjct: 26 KAVSHFQQLTNEVDVHLSVA---RNPRINPRQTAEVTIYA--NGTVIRAQESSENLYASI 80 Query: 180 DLVCDKIRAKLQKIKEKAISR 242 DLV DKI +L+K KEK +++ Sbjct: 81 DLVADKIARQLRKYKEKRMAK 101 [45][TOP] >UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus PCC 6301 RepID=Q5N179_SYNP6 Length = 207 Score = 56.6 bits (135), Expect = 8e-07 Identities = 41/98 (41%), Positives = 53/98 (54%), Gaps = 3/98 (3%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKE--QKVEVTIYTLRNG-VVRVEDAENNLYA 173 KAV+++ L E+DV LS H K Q EVTIY NG V+R E+ NLYA Sbjct: 26 KAVSHYQSFLTEIDVHLSV-----AKHAKSNPRQTAEVTIYA--NGTVIRAEECNENLYA 78 Query: 174 AIDLVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDE 287 +IDLV DKI +L+K KE+ R G+ E D+ Sbjct: 79 SIDLVSDKITRQLKKYKEELRDR---KGQLSTAETADQ 113 [46][TOP] >UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1 Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE Length = 224 Score = 56.6 bits (135), Expect = 8e-07 Identities = 47/146 (32%), Positives = 68/146 (46%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 KA A+F + +VDV LS + +Q EVT++ L N VVR E++ +LYA+ID Sbjct: 26 KATAHFQTLINKVDVCLSVQNNPRIA---PKQTAEVTVF-LNNVVVRAEESSESLYASID 81 Query: 183 LVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQR 362 +V DK+ +L+K KEK R V D + + + D E L Sbjct: 82 MVTDKLTRQLRKYKEKR--------RDQDHATVRPTDVDATINAPDITSHNADISEVLNH 133 Query: 363 QFAELNRIYPANVMRSKTVVLDPITV 440 Q P V+RSK + P+TV Sbjct: 134 Q-----PKLPDTVVRSKYFAMPPMTV 154 [47][TOP] >UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP Length = 213 Score = 56.6 bits (135), Expect = 8e-07 Identities = 34/76 (44%), Positives = 46/76 (60%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 KAV++F + EVDV LS T +Q EVTI+ V+R E++ NLYA+ID Sbjct: 26 KAVSHFQNITNEVDVHLSVARNPRIT---TKQAAEVTIFA-NGSVIRAEESSENLYASID 81 Query: 183 LVCDKIRAKLQKIKEK 230 LV DKI +L+K KE+ Sbjct: 82 LVADKIARQLRKYKER 97 [48][TOP] >UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp. JA-3-3Ab RepID=Q2JS19_SYNJA Length = 191 Score = 55.8 bits (133), Expect = 1e-06 Identities = 53/147 (36%), Positives = 70/147 (47%), Gaps = 1/147 (0%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179 +AV +F+ EVDV LS Q EVT+Y NG V+R E++ NLYA+I Sbjct: 27 RAVKHFAQITSEVDVNLSVA---RNPRISANQSAEVTVYA--NGTVIRAEESSENLYASI 81 Query: 180 DLVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQ 359 D V DK+ KL+K KE+ G R PK V Q+ L T + E Q Sbjct: 82 DRVADKLARKLRKYKER---NGVHRIRHSPKTSVAVA--QQPL------TDPLNTERQ-- 128 Query: 360 RQFAELNRIYPANVMRSKTVVLDPITV 440 AEL P V+R+K + P+TV Sbjct: 129 ---AEL----PPEVVRTKYFAMPPMTV 148 [49][TOP] >UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc punctiforme PCC 73102 RepID=B2IVM1_NOSP7 Length = 214 Score = 55.8 bits (133), Expect = 1e-06 Identities = 36/77 (46%), Positives = 45/77 (58%), Gaps = 1/77 (1%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAI 179 KA ++F EVDV LS AR T Q EVTIY V+R E++ NLYA+I Sbjct: 26 KAASHFQSITNEVDVHLSVARNPRINTR----QAAEVTIYA-NGSVIRAEESSENLYASI 80 Query: 180 DLVCDKIRAKLQKIKEK 230 DLV DKI +L+K KE+ Sbjct: 81 DLVADKIARQLRKYKER 97 [50][TOP] >UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO Length = 199 Score = 55.8 bits (133), Expect = 1e-06 Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAI 179 KAV +F +VDV LS A+ G + + K EVT+Y V+R ++ NLYA+I Sbjct: 26 KAVKHFQAITTKVDVHLSVAKNGRV----QNKHKAEVTVYA-NGAVIRAQEGSENLYASI 80 Query: 180 DLVCDKIRAKLQKIKEKAISRGAW 251 DLV DKI +L+K KE+ + + A+ Sbjct: 81 DLVSDKIARQLRKYKERRLEQKAY 104 [51][TOP] >UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1 Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI Length = 215 Score = 55.5 bits (132), Expect = 2e-06 Identities = 37/81 (45%), Positives = 47/81 (58%), Gaps = 1/81 (1%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179 KAV +F EVDV LS +Q EVTIY NG V+R +++ NLYA+I Sbjct: 26 KAVNHFQQLTTEVDVHLSVA---RNPRINPKQTAEVTIYA--NGTVIRAQESSENLYASI 80 Query: 180 DLVCDKIRAKLQKIKEKAISR 242 DLV DKI +L+K KEK S+ Sbjct: 81 DLVADKIARQLRKYKEKRQSK 101 [52][TOP] >UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1 Tax=Microcoleus chthonoplastes PCC 7420 RepID=B4VJW0_9CYAN Length = 215 Score = 55.5 bits (132), Expect = 2e-06 Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 1/77 (1%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAI 179 KAV +F + EVDV LS AR T +Q EVTIY + V+R +++ +LYA+I Sbjct: 26 KAVNHFQNMTTEVDVHLSVARNPRINT----KQTAEVTIYANKT-VIRAQESSEDLYASI 80 Query: 180 DLVCDKIRAKLQKIKEK 230 DLV DKI+ +L+K KEK Sbjct: 81 DLVADKIQRQLRKYKEK 97 [53][TOP] >UniRef100_B0CDL4 High light inducible protein n=1 Tax=Acaryochloris marina MBIC11017 RepID=B0CDL4_ACAM1 Length = 212 Score = 54.7 bits (130), Expect = 3e-06 Identities = 32/81 (39%), Positives = 48/81 (59%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAID 182 KA ++ + E+DV LS T +Q EVT++ + V+R E++ NLYA+ID Sbjct: 26 KAANHYQNLTTEIDVHLSVARNPRIT---TKQTAEVTLF-VNGSVIRAEESSENLYASID 81 Query: 183 LVCDKIRAKLQKIKEKAISRG 245 LV DKI +L+K KEK ++G Sbjct: 82 LVADKIARQLRKYKEKRQTKG 102 [54][TOP] >UniRef100_A8YEZ8 LrtA protein n=1 Tax=Microcystis aeruginosa PCC 7806 RepID=A8YEZ8_MICAE Length = 199 Score = 54.7 bits (130), Expect = 3e-06 Identities = 46/148 (31%), Positives = 68/148 (45%), Gaps = 2/148 (1%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179 KAV +F+ +VDV LS + K EVT+Y NG V+R ++ NLYA+I Sbjct: 26 KAVKHFNGITTKVDVHLSV---EKNARIPDRHKAEVTVYA--NGTVIRAQEGSENLYASI 80 Query: 180 DLVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLF-DKEEQL 356 DLV DKI +L+K KE+ + E ++E +D L D+ +L Sbjct: 81 DLVSDKIARQLRKYKERLVDH----------RTHSTVKTSEVVQEKPLDDNLIGDRTPEL 130 Query: 357 QRQFAELNRIYPANVMRSKTVVLDPITV 440 PA V+R K + P+T+ Sbjct: 131 -----------PAEVVRMKYFAMPPMTI 147 [55][TOP] >UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC 6803 RepID=LRTA_SYNY3 Length = 191 Score = 54.3 bits (129), Expect = 4e-06 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 1/147 (0%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179 +AV +F + +VDV LS T+ + K EVT+Y NG V+R ++ NLYA+I Sbjct: 26 RAVKHFQNLTTKVDVHLSVARNARITN---KHKAEVTVYA--NGTVIRAQEGSENLYASI 80 Query: 180 DLVCDKIRAKLQKIKEKAISRGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLFDKEEQLQ 359 DLV DKI +L+K KE+ + G E V+++ +E L + D+ +L Sbjct: 81 DLVADKIARQLRKYKERI--QDKQHGNVKTSEIVEDKPVEENL--------IGDRAPEL- 129 Query: 360 RQFAELNRIYPANVMRSKTVVLDPITV 440 P+ V+R K + P+ + Sbjct: 130 ----------PSEVLRMKYFAMPPMAI 146 [56][TOP] >UniRef100_UPI0001B4E6E7 oxidoreductase n=1 Tax=Streptomyces lividans TK24 RepID=UPI0001B4E6E7 Length = 400 Score = 53.9 bits (128), Expect = 5e-06 Identities = 45/135 (33%), Positives = 57/135 (42%), Gaps = 2/135 (1%) Frame = +1 Query: 10 LPTSRTRSRRWTSRCPLAAATPAPTARRSRR*R*PFTRCATAWCAWRMRRTTCTLPSIWF 189 LP SR RS T P A P P A P+ RCA RR C+ S W Sbjct: 210 LPHSRLRSSGGTPIAPSTPAAPTPQASHRWATSSPYRRCARPGTPGGSRRPRCS--SAWT 267 Query: 190 ATRSAPSSRRSRRRPSAAAPG-PAAPAPRRTWMRRTSRSTSRRS-RWTLSCLTRRSSCSA 363 AT PS +R R S + G PA+ P RTW + + S RW T + S+ Sbjct: 268 AT--VPSGPTARGRRSTRSSGAPASARPSRTWRPSACAAGAGTSPRWARRPRTSHACTSS 325 Query: 364 SSPS*TASTPPTSCA 408 ++ + A PP S A Sbjct: 326 ATATGPAPPPPPSSA 340 [57][TOP] >UniRef100_UPI0000E7FCDE PREDICTED: frizzled homolog 8 (Drosophila) n=1 Tax=Gallus gallus RepID=UPI0000E7FCDE Length = 275 Score = 53.9 bits (128), Expect = 5e-06 Identities = 51/162 (31%), Positives = 65/162 (40%), Gaps = 18/162 (11%) Frame = +1 Query: 4 RPLPTSRTRSRRWTSRCPLAAATPAPTARRSRR*R*PFTRCATAWCAWRMRRTTCTLPSI 183 RP S + RR R + A+P PT CA C R T S Sbjct: 53 RPAAASASGPRRAARRSCASTASPGPTG------------CAATGCRSRAAPTR----SA 96 Query: 184 WFATRSAPSSRRSRRRPSA---AAPGPAA-----------PAPRRTWMRRTSRSTSRRSR 321 W T +AP+S R RRRP + AAPGPAA P PR RR + + +R Sbjct: 97 W--TTTAPTSPRPRRRPPSPPSAAPGPAAPPGRPPRPPPRPRPRPRARRRPASRAASAAR 154 Query: 322 WTLSCLTRRSSCSASSPS*TASTPPTSCAPRP----WCSTPS 435 C T + C+ TA T P+SC+ W S P+ Sbjct: 155 LWCRCPTSGTRCT------TAPTTPSSCSSTSCAWWWASPPA 190 [58][TOP] >UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106 RepID=A0YIH4_9CYAN Length = 212 Score = 53.9 bits (128), Expect = 5e-06 Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 1/77 (1%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179 KAV+++ EVDV LS +Q EVTIY NG V+R +++ NLYA+I Sbjct: 26 KAVSHYQQLTNEVDVHLSIA---RNPRINPKQTAEVTIYA--NGTVIRAQESSENLYASI 80 Query: 180 DLVCDKIRAKLQKIKEK 230 DLV DKI +L+K K+K Sbjct: 81 DLVADKIARQLRKFKDK 97 [59][TOP] >UniRef100_B0JSS1 Light repressed protein A homolog n=1 Tax=Microcystis aeruginosa NIES-843 RepID=B0JSS1_MICAN Length = 199 Score = 53.5 bits (127), Expect = 7e-06 Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 3/149 (2%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG-VVRVEDAENNLYAAI 179 KAV +F+ +VDV LS + + EVT+Y NG V+R ++ NLYA+I Sbjct: 26 KAVKHFNGITTKVDVHLSV---EKNARIPDRHRAEVTVYA--NGTVIRAQEGSENLYASI 80 Query: 180 DLVCDKIRAKLQKIKEKAIS-RGAWPGRAGPKEDVDEEDFQEYLKEVKMDTQLF-DKEEQ 353 DLV DKI +L+K KE+ + R P + E ++E +D L D+ + Sbjct: 81 DLVSDKIARQLRKYKERLVDHRTNAPVKT-----------SEVVQEKPLDGSLIGDRTPE 129 Query: 354 LQRQFAELNRIYPANVMRSKTVVLDPITV 440 L PA V+R K + P+T+ Sbjct: 130 L-----------PAEVVRMKYFAMPPMTI 147 [60][TOP] >UniRef100_B9YPU1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax='Nostoc azollae' 0708 RepID=B9YPU1_ANAAZ Length = 214 Score = 53.5 bits (127), Expect = 7e-06 Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 1/77 (1%) Frame = +3 Query: 3 KAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLYAAI 179 +AV +F EV+V LS AR T +Q EVTIY V+R E++ NLYA+I Sbjct: 26 RAVNHFQSITNEVNVHLSVARNPRIST----KQAAEVTIYA-NGSVIRAEESSENLYASI 80 Query: 180 DLVCDKIRAKLQKIKEK 230 DLV DKI +L+K KE+ Sbjct: 81 DLVADKIARQLRKYKER 97