AV635511 ( HC047c06_r )

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[1][TOP]
>UniRef100_Q6SA05 Rubisco activase n=1 Tax=Chlamydomonas reinhardtii
           RepID=Q6SA05_CHLRE
          Length = 408

 Score =  271 bits (692), Expect = 2e-71
 Identities = 137/137 (100%), Positives = 137/137 (100%)
 Frame = +3

Query: 45  MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 224
           MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT
Sbjct: 1   MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 60

Query: 225 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 404
           RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK
Sbjct: 61  RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 120

Query: 405 NFMDLPKIKVPLILGIW 455
           NFMDLPKIKVPLILGIW
Sbjct: 121 NFMDLPKIKVPLILGIW 137

[2][TOP]
>UniRef100_P23489 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Chlamydomonas reinhardtii RepID=RCA_CHLRE
          Length = 408

 Score =  269 bits (687), Expect = 8e-71
 Identities = 136/137 (99%), Positives = 136/137 (99%)
 Frame = +3

Query: 45  MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 224
           MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVA SRKQMGRWRSIDAGVDASDDQQDIT
Sbjct: 1   MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVAPSRKQMGRWRSIDAGVDASDDQQDIT 60

Query: 225 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 404
           RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK
Sbjct: 61  RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 120

Query: 405 NFMDLPKIKVPLILGIW 455
           NFMDLPKIKVPLILGIW
Sbjct: 121 NFMDLPKIKVPLILGIW 137

[3][TOP]
>UniRef100_O04772 Rubisco activase n=1 Tax=Chlorococcum littorale RepID=O04772_CHLLO
          Length = 403

 Score =  177 bits (448), Expect = 4e-43
 Identities = 89/137 (64%), Positives = 108/137 (78%)
 Frame = +3

Query: 45  MQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDIT 224
           MQ+ MK++A    +  GA+ A ++VR   +    +S+ Q GRW +IDAG D SDDQQDIT
Sbjct: 1   MQMQMKNTAF---KATGAKTAPKAVR---VPACKASKSQAGRWAAIDAGNDMSDDQQDIT 54

Query: 225 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAK 404
           RGR+MVD LFQG    GGTH+AVLSS++YLS +  +FNN+EDGFYISPAFLDKMTIH+AK
Sbjct: 55  RGRDMVDSLFQGPGSGGGTHSAVLSSEDYLSTASRNFNNVEDGFYISPAFLDKMTIHVAK 114

Query: 405 NFMDLPKIKVPLILGIW 455
           NFMDLPKIKVPLILGIW
Sbjct: 115 NFMDLPKIKVPLILGIW 131

[4][TOP]
>UniRef100_C1MPQ3 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplast
           n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1MPQ3_9CHLO
          Length = 419

 Score =  133 bits (334), Expect = 7e-30
 Identities = 72/143 (50%), Positives = 91/143 (63%), Gaps = 8/143 (5%)
 Frame = +3

Query: 51  VTMKSSAVSGQRVGGARVATRSVRRAQLQVVASS-------RKQMGRWRSIDAGVDASDD 209
           VTM S      ++G    A   V R QL  V +        + QM RW+ +D   D SDD
Sbjct: 4   VTMSSMIAPVAKIG----AVGKVARHQLGSVPNQLGKGNGMKVQMSRWKGMDE--DISDD 57

Query: 210 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIED-GFYISPAFLDKM 386
           QQDI RGR MVD  FQGGFG GGT NA++   +Y+S      +N+ D G+YIS +++DK+
Sbjct: 58  QQDIARGRGMVDSKFQGGFGLGGTQNAIMQGSDYVSDGFKDLSNMSDEGYYISKSYMDKI 117

Query: 387 TIHIAKNFMDLPKIKVPLILGIW 455
           T+H+AKNFMDLPKIKVPLILGIW
Sbjct: 118 TVHVAKNFMDLPKIKVPLILGIW 140

[5][TOP]
>UniRef100_C1E4S4 Ribulose bisphosphate carboxylase/oxygenase activase,chloroplast
           n=1 Tax=Micromonas sp. RCC299 RepID=C1E4S4_9CHLO
          Length = 413

 Score =  132 bits (333), Expect = 9e-30
 Identities = 64/104 (61%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
 Frame = +3

Query: 147 SSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSR 326
           S    M RW+ +D   D SDDQQDI RGR MVD  FQGGFG GGTHNAV+SS +Y+S   
Sbjct: 38  SKTVMMSRWKGMDE--DISDDQQDIARGRNMVDSKFQGGFGLGGTHNAVMSSSDYVSDGF 95

Query: 327 ASFNNIED-GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
              +N+ D G+YIS  F+D+  +HIAKNFMDLPKIKVPLILG+W
Sbjct: 96  KDVSNMTDEGYYISKGFMDRFCVHIAKNFMDLPKIKVPLILGVW 139

[6][TOP]
>UniRef100_A4RW20 Predicted protein n=1 Tax=Ostreococcus lucimarinus CCE9901
           RepID=A4RW20_OSTLU
          Length = 415

 Score =  131 bits (330), Expect = 2e-29
 Identities = 67/140 (47%), Positives = 91/140 (65%), Gaps = 5/140 (3%)
 Frame = +3

Query: 51  VTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRK-QMGRWRSIDAGVDASDDQQDITR 227
           +T     V         VA ++   A++  V++  K +M RW+ +D  +D SDDQQDI R
Sbjct: 4   ITQPRCGVKANATAKRAVAPKTFLGARVSSVSNGSKVEMSRWKGMD--MDISDDQQDIAR 61

Query: 228 GREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASF----NNIEDGFYISPAFLDKMTIH 395
           GR MVD  FQG  G GGTHNAV+SSQ+YLS    ++    N   + FYISP+++DK+ +H
Sbjct: 62  GRNMVDSKFQGATGIGGTHNAVMSSQDYLSAGMKTYSAHDNITTENFYISPSYMDKVIVH 121

Query: 396 IAKNFMDLPKIKVPLILGIW 455
           +AKNFM LPKIKVP+ILG+W
Sbjct: 122 VAKNFMKLPKIKVPVILGVW 141

[7][TOP]
>UniRef100_Q01AY1 RuBisCO activase (IC) n=1 Tax=Ostreococcus tauri RepID=Q01AY1_OSTTA
          Length = 407

 Score =  130 bits (328), Expect = 4e-29
 Identities = 72/144 (50%), Positives = 94/144 (65%), Gaps = 4/144 (2%)
 Frame = +3

Query: 36  LRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQ 215
           +R    T K  AV+ +   GARV++         V   S+ +M RW+ +D  +D SDDQQ
Sbjct: 1   MRQANATTKR-AVAPKTFLGARVSS---------VSNGSKVEMSRWKGMD--MDISDDQQ 48

Query: 216 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASF----NNIEDGFYISPAFLDK 383
           DI RG+ MVD  FQGG G GGTHNAV+SSQ+YLS    ++    N   + FYIS +++DK
Sbjct: 49  DIARGKNMVDSKFQGGAGIGGTHNAVMSSQDYLSAGMKTYDGHDNITAENFYISKSYMDK 108

Query: 384 MTIHIAKNFMDLPKIKVPLILGIW 455
           + +HIAKNFM LPKIKVPLILG+W
Sbjct: 109 VVVHIAKNFMQLPKIKVPLILGVW 132

[8][TOP]
>UniRef100_A9RES5 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RES5_PHYPA
          Length = 477

 Score =  128 bits (321), Expect = 2e-28
 Identities = 76/161 (47%), Positives = 101/161 (62%), Gaps = 19/161 (11%)
 Frame = +3

Query: 30  SALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVAS-----------------SRK 158
           +AL++  V   +S V+   VG + V + +    + +V AS                 S K
Sbjct: 6   TALQSASVAQVNSGVAPSTVGKSAVPSSAFLGCKSKVPASAALGLAKGKSRVVAEAESSK 65

Query: 159 QMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN 338
           ++ RW  +  G D SDDQQDI RG+ +VD LFQG  G G T NAVLSS +Y+SQ + +++
Sbjct: 66  KVDRWAGL--GTDISDDQQDIQRGKGLVDALFQGPQGMG-TQNAVLSSWDYISQGQRTYS 122

Query: 339 --NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
             NI+DG YI+PAF+DK+ IHIAKNFMDLP IKVPLILGIW
Sbjct: 123 MDNIKDGLYIAPAFMDKLVIHIAKNFMDLPGIKVPLILGIW 163

[9][TOP]
>UniRef100_O98997 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Vigna radiata var. radiata RepID=RCA_PHAAU
          Length = 439

 Score =  127 bits (318), Expect = 5e-28
 Identities = 68/126 (53%), Positives = 84/126 (66%), Gaps = 2/126 (1%)
 Frame = +3

Query: 84  RVGGARVATRSVR--RAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQ 257
           RV  ++V   S +   A+ ++  S +    RW+ +    D SDDQQDITRG+ MVD LFQ
Sbjct: 44  RVPNSKVTNGSFKIVAAEKEIEESQQTNKDRWKGL--AYDISDDQQDITRGKGMVDPLFQ 101

Query: 258 GGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVP 437
               AG TH AV+SS EYLS      +NI+DGFYI+PAFLDK+ +HI KNFM LP IKVP
Sbjct: 102 APMDAG-THYAVMSSYEYLSTGLRQLDNIKDGFYIAPAFLDKLVVHITKNFMTLPNIKVP 160

Query: 438 LILGIW 455
           LILGIW
Sbjct: 161 LILGIW 166

[10][TOP]
>UniRef100_A9TJI2 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TJI2_PHYPA
          Length = 471

 Score =  125 bits (315), Expect = 1e-27
 Identities = 72/139 (51%), Positives = 95/139 (68%), Gaps = 5/139 (3%)
 Frame = +3

Query: 54  TMKSSAVSGQRVGGARVATRSVRRAQLQVVA---SSRKQMGRWRSIDAGVDASDDQQDIT 224
           T+ SSA  G +   +   T  +   + +VVA   SS+ ++ RW  +  G D SDDQQDI 
Sbjct: 21  TVPSSAFFGCKSKVSANGTLGIANGKSRVVAEAESSKTKVDRWAGL--GNDISDDQQDIQ 78

Query: 225 RGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHI 398
           RG+ MVD LFQG  G G T NA++SS  Y+SQ + +++  NI+DG YI+PAF+DK+ IHI
Sbjct: 79  RGKGMVDALFQGAQGLG-TQNAIMSSWGYVSQGQRTYSMDNIKDGLYIAPAFMDKLVIHI 137

Query: 399 AKNFMDLPKIKVPLILGIW 455
           AKNFM+LP IKVPLILGIW
Sbjct: 138 AKNFMNLPGIKVPLILGIW 156

[11][TOP]
>UniRef100_B9HMK4 Predicted protein (Fragment) n=1 Tax=Populus trichocarpa
           RepID=B9HMK4_POPTR
          Length = 438

 Score =  125 bits (314), Expect = 1e-27
 Identities = 72/144 (50%), Positives = 91/144 (63%), Gaps = 10/144 (6%)
 Frame = +3

Query: 54  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVASS-----RKQMGRWRSIDAGVDASDD 209
           T+ +SA  G   ++V  +R     +     +VVA       + +  RW  +    D SDD
Sbjct: 26  TVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVT--DMSDD 83

Query: 210 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDK 383
           QQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DGFYI+PAF+DK
Sbjct: 84  QQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGFYIAPAFMDK 142

Query: 384 MTIHIAKNFMDLPKIKVPLILGIW 455
           + +HI+KNFM LP IKVPLILGIW
Sbjct: 143 IVVHISKNFMSLPNIKVPLILGIW 166

[12][TOP]
>UniRef100_A9PFQ2 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=A9PFQ2_POPTR
          Length = 475

 Score =  125 bits (314), Expect = 1e-27
 Identities = 72/144 (50%), Positives = 91/144 (63%), Gaps = 10/144 (6%)
 Frame = +3

Query: 54  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVASS-----RKQMGRWRSIDAGVDASDD 209
           T+ +SA  G   ++V  +R     +     +VVA       + +  RW  +    D SDD
Sbjct: 26  TVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVT--DMSDD 83

Query: 210 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDK 383
           QQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DGFYI+PAF+DK
Sbjct: 84  QQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGFYIAPAFMDK 142

Query: 384 MTIHIAKNFMDLPKIKVPLILGIW 455
           + +HI+KNFM LP IKVPLILGIW
Sbjct: 143 IVVHISKNFMSLPNIKVPLILGIW 166

[13][TOP]
>UniRef100_O64981 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Phaseolus vulgaris RepID=RCA_PHAVU
          Length = 441

 Score =  124 bits (312), Expect = 3e-27
 Identities = 71/143 (49%), Positives = 94/143 (65%), Gaps = 12/143 (8%)
 Frame = +3

Query: 63  SSAVSG---QRVGGARVATRSVRRAQLQVVASSRK-------QMGRWRSIDAGVDASDDQ 212
           SSA  G   ++V  +RV    +     ++VA+ ++       +  RWR +    D SDDQ
Sbjct: 29  SSAFFGTSLKKVISSRVPNSKLTSGSFKIVAADKEIEETQQTEGDRWRGL--AYDVSDDQ 86

Query: 213 QDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKM 386
           QDITRG+ +VD LFQ    AG TH AV+SS +YLS    + +F+NI+DGFYI+PAFLDK+
Sbjct: 87  QDITRGKGLVDSLFQAPMDAG-THYAVISSHKYLSAGLRQYNFDNIKDGFYIAPAFLDKL 145

Query: 387 TIHIAKNFMDLPKIKVPLILGIW 455
            +HIAKNFM LP IKVPLILG+W
Sbjct: 146 VVHIAKNFMTLPNIKVPLILGVW 168

[14][TOP]
>UniRef100_B1PDJ9 Chloroplast rubisco activase n=1 Tax=Capsicum annuum
           RepID=B1PDJ9_CAPAN
          Length = 439

 Score =  124 bits (311), Expect = 3e-27
 Identities = 65/132 (49%), Positives = 88/132 (66%), Gaps = 4/132 (3%)
 Frame = +3

Query: 72  VSGQRVGGARVATRSVRRAQLQVVASSRKQMG--RWRSIDAGVDASDDQQDITRGREMVD 245
           V G+ +   +V+ RS+R    +     +KQ    RW+ +  G D SDDQQDI RG+ MVD
Sbjct: 40  VYGKGISSPKVSNRSLRIVAEEKEIDEKKQTDGDRWKGL--GTDVSDDQQDIARGKGMVD 97

Query: 246 DLFQGGFGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDL 419
            LFQ   G G TH+A+++S EYLSQ   + S +N  DGFYI+PAF+DK+ +HI KNF+ L
Sbjct: 98  SLFQAPTGTG-THHAIMNSYEYLSQGLKQYSMDNKLDGFYIAPAFMDKLVVHITKNFLQL 156

Query: 420 PKIKVPLILGIW 455
           P IK+PLILG+W
Sbjct: 157 PNIKIPLILGVW 168

[15][TOP]
>UniRef100_A9PJF4 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
           Populus deltoides RepID=A9PJF4_9ROSI
          Length = 461

 Score =  124 bits (311), Expect = 3e-27
 Identities = 71/144 (49%), Positives = 91/144 (63%), Gaps = 10/144 (6%)
 Frame = +3

Query: 54  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVASS-----RKQMGRWRSIDAGVDASDD 209
           T+ +SA  G   ++V  +R     +     +VVA       + +  RW  +    D SDD
Sbjct: 26  TVPTSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEEYDEEKQTEKDRWGGLVT--DMSDD 83

Query: 210 QQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDK 383
           QQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DG+YI+PAF+DK
Sbjct: 84  QQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGYYIAPAFMDK 142

Query: 384 MTIHIAKNFMDLPKIKVPLILGIW 455
           + +HI+KNFM LP IKVPLILGIW
Sbjct: 143 IVVHISKNFMSLPNIKVPLILGIW 166

[16][TOP]
>UniRef100_A9PJ06 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
           Populus deltoides RepID=A9PJ06_9ROSI
          Length = 476

 Score =  124 bits (311), Expect = 3e-27
 Identities = 71/141 (50%), Positives = 90/141 (63%), Gaps = 7/141 (4%)
 Frame = +3

Query: 54  TMKSSAVSG---QRVGGARVATRSVRRAQLQVVAS--SRKQMGRWRSIDAGVDASDDQQD 218
           T+ +SA  G   ++V  +R     +     +VVA    +KQ  + R      D SDDQQD
Sbjct: 26  TVPNSAFFGNSLKKVSSSRFTNSKISSGSFKVVAEYDEKKQTDKDRWGGLVTDMSDDQQD 85

Query: 219 ITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTI 392
           ITRG+ MVD LFQ   G G THN +LSS EYLSQ   ++N  N  DG+YI+PAF+DK+ +
Sbjct: 86  ITRGKGMVDSLFQAPQGTG-THNPILSSYEYLSQGLRTYNLDNNMDGYYIAPAFMDKLVV 144

Query: 393 HIAKNFMDLPKIKVPLILGIW 455
           HI+KNFM LP IKVPLILGIW
Sbjct: 145 HISKNFMSLPNIKVPLILGIW 165

[17][TOP]
>UniRef100_Q40460 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic n=1 Tax=Nicotiana tabacum RepID=RCA1_TOBAC
          Length = 442

 Score =  124 bits (310), Expect = 4e-27
 Identities = 69/132 (52%), Positives = 86/132 (65%), Gaps = 4/132 (3%)
 Frame = +3

Query: 72  VSGQRVGGARVATRSVRRAQLQVVASSRKQMG--RWRSIDAGVDASDDQQDITRGREMVD 245
           V G+ V   +V  +S+R    Q+    +KQ    RW+ +    D SDDQQDITRG+ MVD
Sbjct: 40  VYGKGVSSPKVTNKSLRIVAEQIDVDPKKQTDSDRWKGLVQ--DFSDDQQDITRGKGMVD 97

Query: 246 DLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDL 419
            LFQ   G G TH+AVL S EY+SQ    +N  N  DGFYI+PAF+DK+ +HI KNF+ L
Sbjct: 98  SLFQAPTGTG-THHAVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITKNFLKL 156

Query: 420 PKIKVPLILGIW 455
           P IKVPLILGIW
Sbjct: 157 PNIKVPLILGIW 168

[18][TOP]
>UniRef100_C5Y1T6 Putative uncharacterized protein Sb05g027880 n=1 Tax=Sorghum
           bicolor RepID=C5Y1T6_SORBI
          Length = 473

 Score =  122 bits (307), Expect = 1e-26
 Identities = 73/155 (47%), Positives = 95/155 (61%), Gaps = 4/155 (2%)
 Frame = +3

Query: 3   STTFRPFIQSALRTMQ-VTMKSSAVSGQRVGGAR--VATRSVRRAQLQVVASSRK-QMGR 170
           ST    F+ S     Q +T+ S     Q   G R  +  R++     Q V  +++ +  R
Sbjct: 19  STAANSFLGSNNNNKQKLTVSSIRKKKQHQQGGRGLIIIRAMAAVNKQEVDETKQTEQDR 78

Query: 171 WRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIED 350
           WR +    D SDDQQDITRG+ M+D LFQ   G  GTH AVLSS +Y+SQ    +N + D
Sbjct: 79  WRGL--AYDTSDDQQDITRGKGMIDSLFQAPMG-DGTHVAVLSSYDYISQGLRQYNTM-D 134

Query: 351 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           G+YI+PAF+DK+ +HIAKNFM LP IKVPLILGIW
Sbjct: 135 GYYIAPAFMDKLVLHIAKNFMTLPNIKVPLILGIW 169

[19][TOP]
>UniRef100_Q40565 Ribulose bisphosphate carboxylase/oxygenase activase 2,
           chloroplastic n=1 Tax=Nicotiana tabacum RepID=RCA2_TOBAC
          Length = 439

 Score =  122 bits (306), Expect = 1e-26
 Identities = 68/132 (51%), Positives = 86/132 (65%), Gaps = 4/132 (3%)
 Frame = +3

Query: 72  VSGQRVGGARVATRSVRRAQLQVVASSRKQM--GRWRSIDAGVDASDDQQDITRGREMVD 245
           V G+ V   +V  RS+R A  +  A  +KQ    RW+ +    D SDDQQDI RG+ MVD
Sbjct: 40  VYGKGVSSPKVTNRSLRIAAEEKDADPKKQTYSDRWKGLVQ--DFSDDQQDIARGKGMVD 97

Query: 246 DLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDL 419
            LFQ   G G TH+AVL S EY+SQ    +N  N  DGFYI+P+F+DK+ +HI KNF+ L
Sbjct: 98  SLFQAPTGTG-THHAVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITKNFLKL 156

Query: 420 PKIKVPLILGIW 455
           P IKVPLILG+W
Sbjct: 157 PNIKVPLILGVW 168

[20][TOP]
>UniRef100_Q9M4V3 Ribulose bisphosphate carboxylase activase B n=1 Tax=Triticum
           aestivum RepID=Q9M4V3_WHEAT
          Length = 432

 Score =  122 bits (305), Expect = 2e-26
 Identities = 65/126 (51%), Positives = 84/126 (66%), Gaps = 4/126 (3%)
 Frame = +3

Query: 90  GGARVATRSVRR--AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGG 263
           GG ++  R VR   A+ ++    +    RW+ +    D SDDQQDITRG+ +VD LFQ  
Sbjct: 36  GGNKINNRVVRAMAAKKELDEGKQTDADRWKGL--AYDISDDQQDITRGKGIVDSLFQAP 93

Query: 264 FGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVP 437
            G  GTH A+LSS EY+SQ   +  F+N  DG YI+PAF+DK+ +H+AKNFM LP IKVP
Sbjct: 94  MG-DGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVP 152

Query: 438 LILGIW 455
           LILGIW
Sbjct: 153 LILGIW 158

[21][TOP]
>UniRef100_Q9ATB9 Rubisco activase (Fragment) n=1 Tax=Zantedeschia aethiopica
           RepID=Q9ATB9_ZANAE
          Length = 435

 Score =  122 bits (305), Expect = 2e-26
 Identities = 69/153 (45%), Positives = 93/153 (60%), Gaps = 2/153 (1%)
 Frame = +3

Query: 3   STTFRPFIQSALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSI 182
           S T   F+ ++L+T+  ++          G  R +T +++     +  S + +  RW  +
Sbjct: 23  SVTRSGFLGTSLKTVNPSL----------GHGRTSTGTLKVMAADLDESKQTKTDRWAGL 72

Query: 183 DAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGF 356
               D SDDQQDITRG+ MVD LFQ   G  GTHN VLSS EY+S    SFN  N  +G 
Sbjct: 73  YT--DTSDDQQDITRGKGMVDSLFQAPMG-DGTHNPVLSSYEYISTGLRSFNLDNTVNGL 129

Query: 357 YISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           YI+PAF+DK+ +HI KNFM+LP IK+PLILGIW
Sbjct: 130 YIAPAFMDKLVVHITKNFMNLPNIKIPLILGIW 162

[22][TOP]
>UniRef100_Q42450 Ribulose bisphosphate carboxylase/oxygenase activase B,
           chloroplastic n=1 Tax=Hordeum vulgare RepID=RCAB_HORVU
          Length = 425

 Score =  122 bits (305), Expect = 2e-26
 Identities = 65/126 (51%), Positives = 85/126 (67%), Gaps = 4/126 (3%)
 Frame = +3

Query: 90  GGARVATRSVR--RAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGG 263
           GG ++ +R VR   A+ ++    +    RW+ +    D SDDQQDITRG+ +VD LFQ  
Sbjct: 30  GGNKMKSRVVRVMAAKKELDQGKQTDADRWKGL--AYDISDDQQDITRGKGIVDSLFQAP 87

Query: 264 FGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVP 437
            G  GTH A+LSS EY+SQ   +  F+N  DG YI+PAF+DK+ +H+AKNFM LP IKVP
Sbjct: 88  MG-DGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVP 146

Query: 438 LILGIW 455
           LILGIW
Sbjct: 147 LILGIW 152

[23][TOP]
>UniRef100_Q941B7 At2g39730/T5I7.3 n=1 Tax=Arabidopsis thaliana RepID=Q941B7_ARATH
          Length = 474

 Score =  121 bits (304), Expect = 2e-26
 Identities = 61/98 (62%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 341
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           + DGFYI+PAF+DK+ +HI KNF+ LP IKVPLILGIW
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIW 164

[24][TOP]
>UniRef100_Q8H172 At2g39730/T5I7.3 n=1 Tax=Arabidopsis thaliana RepID=Q8H172_ARATH
          Length = 474

 Score =  121 bits (304), Expect = 2e-26
 Identities = 61/98 (62%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 341
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           + DGFYI+PAF+DK+ +HI KNF+ LP IKVPLILGIW
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIW 164

[25][TOP]
>UniRef100_Q3EBJ5 Putative uncharacterized protein At2g39730.3 n=1 Tax=Arabidopsis
           thaliana RepID=Q3EBJ5_ARATH
          Length = 441

 Score =  121 bits (304), Expect = 2e-26
 Identities = 61/98 (62%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 341
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           + DGFYI+PAF+DK+ +HI KNF+ LP IKVPLILGIW
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIW 164

[26][TOP]
>UniRef100_P10896-2 Isoform Short of Ribulose bisphosphate carboxylase/oxygenase
           activase, chloroplastic n=1 Tax=Arabidopsis thaliana
           RepID=P10896-2
          Length = 446

 Score =  121 bits (304), Expect = 2e-26
 Identities = 61/98 (62%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 341
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           + DGFYI+PAF+DK+ +HI KNF+ LP IKVPLILGIW
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIW 164

[27][TOP]
>UniRef100_P10896 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Arabidopsis thaliana RepID=RCA_ARATH
          Length = 474

 Score =  121 bits (304), Expect = 2e-26
 Identities = 61/98 (62%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 341
           RWR +    D SDDQQDITRG+ MVD +FQ   G G TH+AVLSS EY+SQ    +N  N
Sbjct: 70  RWRGL--AYDTSDDQQDITRGKGMVDSVFQAPMGTG-THHAVLSSYEYVSQGLRQYNLDN 126

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           + DGFYI+PAF+DK+ +HI KNF+ LP IKVPLILGIW
Sbjct: 127 MMDGFYIAPAFMDKLVVHITKNFLTLPNIKVPLILGIW 164

[28][TOP]
>UniRef100_Q9ATC2 Rubisco activase (Fragment) n=2 Tax=Zantedeschia aethiopica
           RepID=Q9ATC2_ZANAE
          Length = 436

 Score =  121 bits (303), Expect = 3e-26
 Identities = 64/125 (51%), Positives = 82/125 (65%), Gaps = 2/125 (1%)
 Frame = +3

Query: 87  VGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGF 266
           +G  R +T +++     +  S + +  RW  +    D SDDQQDITRG+ MVD LFQ   
Sbjct: 5   LGHGRTSTGTLKVMAADLDESKQTKTDRWAGLYT--DTSDDQQDITRGKGMVDSLFQAPM 62

Query: 267 GAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPL 440
           G  GTHN VLSS EY+S    SFN  N  +G YI+PAF+DK+ +HI KNFM+LP IK+PL
Sbjct: 63  G-DGTHNPVLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLPNIKIPL 121

Query: 441 ILGIW 455
           ILGIW
Sbjct: 122 ILGIW 126

[29][TOP]
>UniRef100_Q9AXG0 Ribulose-1,5-bisphosphate carboxylase/oxygenase activase 2
           (Fragment) n=1 Tax=Gossypium hirsutum RepID=Q9AXG0_GOSHI
          Length = 435

 Score =  120 bits (302), Expect = 4e-26
 Identities = 62/115 (53%), Positives = 80/115 (69%), Gaps = 2/115 (1%)
 Frame = +3

Query: 117 VRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVL 296
           V  A+ ++   ++ +  RW+ +    D SDDQQDITRG+ MVD LFQ      GTH AV+
Sbjct: 14  VMAAEKEIDEETQTEKDRWKGL--AYDISDDQQDITRGKGMVDSLFQAPMN-DGTHYAVM 70

Query: 297 SSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           SS EY+SQ   ++N  N  DGFYI+PAF+DK+ +HI+KNFM LP IKVPLILGIW
Sbjct: 71  SSYEYISQGLKTYNLDNNMDGFYIAPAFMDKLVVHISKNFMSLPNIKVPLILGIW 125

[30][TOP]
>UniRef100_C5Y1T5 Putative uncharacterized protein Sb05g027870 n=1 Tax=Sorghum
           bicolor RepID=C5Y1T5_SORBI
          Length = 440

 Score =  120 bits (302), Expect = 4e-26
 Identities = 70/151 (46%), Positives = 95/151 (62%), Gaps = 6/151 (3%)
 Frame = +3

Query: 21  FIQSALRTMQVTMKSSAVSGQRVGGARVATRSVRR----AQLQVVASSRKQMGRWRSIDA 188
           F+   L   QV+  ++AV+      +  A  +V R    A  +V  + +    RW+ +  
Sbjct: 21  FLGKKLSKQQVSA-AAAVNYYHGKSSSSAAANVNRFKVMAAKEVDETKQSDQDRWKGL-- 77

Query: 189 GVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRA--SFNNIEDGFYI 362
             D SDDQQDITRG+ M+D LFQ   G  GTH AVLSS +Y+SQ +   SF+N+ DGFYI
Sbjct: 78  AYDVSDDQQDITRGKGMIDSLFQAPMG-DGTHVAVLSSYDYISQGQKTYSFDNMMDGFYI 136

Query: 363 SPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           S +F+DK+ +H++KNFM LP IKVPLILGIW
Sbjct: 137 SKSFMDKLVVHLSKNFMSLPNIKVPLILGIW 167

[31][TOP]
>UniRef100_C5J0I3 Chloroplast rubisco activase n=1 Tax=Cucumis sativus
           RepID=C5J0I3_CUCSA
          Length = 611

 Score =  120 bits (302), Expect = 4e-26
 Identities = 67/138 (48%), Positives = 88/138 (63%), Gaps = 7/138 (5%)
 Frame = +3

Query: 63  SSAVSGQRVG-GARVATRSVRRAQLQVVASS----RKQMGRWRSIDAGVDASDDQQDITR 227
           +SA  G R+   +R  T  +     ++VA      + +  +WR +    D SDDQQDITR
Sbjct: 27  NSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGL--AFDTSDDQQDITR 84

Query: 228 GREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRA--SFNNIEDGFYISPAFLDKMTIHIA 401
           G+ + D LFQ   G G THNAVLSS EY+S      S++N  DGFYI+PAF+DK+T+HI 
Sbjct: 85  GKGLADPLFQAPMGTG-THNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIV 143

Query: 402 KNFMDLPKIKVPLILGIW 455
           KNF+ LP IKVPLILG+W
Sbjct: 144 KNFLTLPNIKVPLILGVW 161

[32][TOP]
>UniRef100_Q01587 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Cucumis sativus RepID=RCA_CUCSA
          Length = 413

 Score =  120 bits (302), Expect = 4e-26
 Identities = 67/138 (48%), Positives = 88/138 (63%), Gaps = 7/138 (5%)
 Frame = +3

Query: 63  SSAVSGQRVG-GARVATRSVRRAQLQVVASS----RKQMGRWRSIDAGVDASDDQQDITR 227
           +SA  G R+   +R  T  +     ++VA      + +  +WR +    D SDDQQDITR
Sbjct: 27  NSAFLGSRLKVSSRFTTSKMVTGNFKIVAEQDEEKQTEKDKWRGL--AFDTSDDQQDITR 84

Query: 228 GREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRA--SFNNIEDGFYISPAFLDKMTIHIA 401
           G+ + D LFQ   G G THNAVLSS EY+S      S++N  DGFYI+PAF+DK+T+HI 
Sbjct: 85  GKGLADPLFQAPMGTG-THNAVLSSYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIV 143

Query: 402 KNFMDLPKIKVPLILGIW 455
           KNF+ LP IKVPLILG+W
Sbjct: 144 KNFLTLPNIKVPLILGVW 161

[33][TOP]
>UniRef100_Q308Y6 Ribulose-1,5-bisphosphate carboxylase/oxygenase activase alpha 2
           n=1 Tax=Gossypium hirsutum RepID=Q308Y6_GOSHI
          Length = 421

 Score =  120 bits (301), Expect = 5e-26
 Identities = 62/112 (55%), Positives = 78/112 (69%), Gaps = 2/112 (1%)
 Frame = +3

Query: 126 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 305
           A+ ++   ++ +  RW+ +    D SDDQQDITRG+ MVD LFQ      GTH AV+SS 
Sbjct: 3   AEKEIDEETQTEKDRWKGL--AYDISDDQQDITRGKGMVDSLFQAPMN-DGTHYAVMSSY 59

Query: 306 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           EYLSQ   ++N  N  DGFYI+PAF+DK+ +HI KNFM LP IKVPLILGIW
Sbjct: 60  EYLSQGLKTYNLDNNMDGFYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIW 111

[34][TOP]
>UniRef100_C0P5X6 Putative uncharacterized protein n=1 Tax=Zea mays
           RepID=C0P5X6_MAIZE
          Length = 463

 Score =  120 bits (301), Expect = 5e-26
 Identities = 65/119 (54%), Positives = 82/119 (68%), Gaps = 2/119 (1%)
 Frame = +3

Query: 105 ATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTH 284
           AT ++R   + V  +   +  RWR +   +D SDDQQDITRG+  VD LFQ   G  GTH
Sbjct: 45  ATTTIRVRAMAV--NKETEQDRWRGL--ALDTSDDQQDITRGKGRVDPLFQAPMG-DGTH 99

Query: 285 NAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
            AVLSS +Y+SQ     S +N+ DG+YI+PAF+DK+ +HIAKNFM LP IKVPLILGIW
Sbjct: 100 VAVLSSYDYISQGLRHYSLDNMMDGYYIAPAFMDKLVVHIAKNFMPLPNIKVPLILGIW 158

[35][TOP]
>UniRef100_A9UHW7 Rubisco activase n=1 Tax=Ipomoea batatas RepID=A9UHW7_IPOBA
          Length = 439

 Score =  119 bits (297), Expect = 1e-25
 Identities = 61/112 (54%), Positives = 80/112 (71%), Gaps = 2/112 (1%)
 Frame = +3

Query: 126 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 305
           AQ ++  S +    RW+ +    D SDDQQDITRG+ +VD LFQ   G G TH+AVLSS 
Sbjct: 57  AQPEIDESKQTHEDRWKGLVE--DISDDQQDITRGKGLVDTLFQAPMGTG-THHAVLSSY 113

Query: 306 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           EY+SQ + +++  N  DGFYI+PAF+DK+ +HI KNF+ LP IK+PLILGIW
Sbjct: 114 EYVSQGQKTYSLDNKLDGFYIAPAFMDKLVVHITKNFLKLPNIKIPLILGIW 165

[36][TOP]
>UniRef100_A9PG25 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=A9PG25_POPTR
          Length = 361

 Score =  119 bits (297), Expect = 1e-25
 Identities = 60/87 (68%), Positives = 69/87 (79%), Gaps = 2/87 (2%)
 Frame = +3

Query: 201 SDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAF 374
           SDDQQDITRG+ MVD LFQ   G G THN VLSS EYLSQ   ++N  N+ DGFYI+PAF
Sbjct: 2   SDDQQDITRGKGMVDSLFQAPQGTG-THNPVLSSYEYLSQGLRTYNLDNMMDGFYIAPAF 60

Query: 375 LDKMTIHIAKNFMDLPKIKVPLILGIW 455
           +DK+ +HI+KNFM LP IKVPLILGIW
Sbjct: 61  MDKIVVHISKNFMSLPNIKVPLILGIW 87

[37][TOP]
>UniRef100_A8W9B0 Chloroplast ribulose 1,5-bisphosphate carboxylase/oxygenase
           activase n=1 Tax=Flaveria bidentis RepID=A8W9B0_FLABI
          Length = 438

 Score =  119 bits (297), Expect = 1e-25
 Identities = 64/135 (47%), Positives = 85/135 (62%), Gaps = 1/135 (0%)
 Frame = +3

Query: 54  TMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGR 233
           ++K    S   V   + +T  +  A+ ++  + +    RWR +    D SDDQQDITRG+
Sbjct: 31  SLKKIVNSRHAVNNNKFSTFKIFAAEKEIEETKQTDKDRWRGL--AYDMSDDQQDITRGK 88

Query: 234 EMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTIHIAKNF 410
            MVD LFQ    +G TH AV+SS EY+S   R   +N  DGFYI+PAF+DK+ +HI KNF
Sbjct: 89  GMVDSLFQAPQDSG-THFAVMSSYEYISTGLRTYLDNNMDGFYIAPAFMDKLVVHITKNF 147

Query: 411 MDLPKIKVPLILGIW 455
           M LP IKVPLILG+W
Sbjct: 148 MTLPNIKVPLILGVW 162

[38][TOP]
>UniRef100_A9TBN9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TBN9_PHYPA
          Length = 455

 Score =  118 bits (296), Expect = 2e-25
 Identities = 68/147 (46%), Positives = 94/147 (63%), Gaps = 5/147 (3%)
 Frame = +3

Query: 30  SALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASS---RKQMGRWRSIDAGVDA 200
           SA  T + T+ SSA+ G     +   T  V + + +VV  +   +K++ RW  +  G D 
Sbjct: 21  SAQATSKSTLPSSALFGCSSKVSVNVTLGVAKGKSRVVCEAEGEKKKVDRWAGL--GNDI 78

Query: 201 SDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAF 374
           SDDQQDI RG+ MVD LFQG  G G T    +SS +Y+S ++ ++N  N  DG YI+PAF
Sbjct: 79  SDDQQDIQRGKGMVDALFQGATGLG-TQVVTMSSWDYVSTAQRTYNFDNTSDGLYIAPAF 137

Query: 375 LDKMTIHIAKNFMDLPKIKVPLILGIW 455
           +DK+ IH+ KNFM+LP IKVPLILG+W
Sbjct: 138 MDKLVIHVCKNFMNLPGIKVPLILGVW 164

[39][TOP]
>UniRef100_A9TBP0 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TBP0_PHYPA
          Length = 445

 Score =  118 bits (295), Expect = 2e-25
 Identities = 67/140 (47%), Positives = 92/140 (65%), Gaps = 6/140 (4%)
 Frame = +3

Query: 54  TMKSSAVSGQRVGGARVATRSVRRAQLQVVASS----RKQMGRWRSIDAGVDASDDQQDI 221
           T+ +SA  G +   +   T  V + + +VV  +    +K++ RW  +  G D SDDQQDI
Sbjct: 28  TLPNSAFLGCKSKVSANVTLGVAKGKSRVVCEAEGEKKKKVDRWAGL--GNDISDDQQDI 85

Query: 222 TRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIH 395
            RG+ MVD LFQG  G G T    +SS +Y+S  + ++N  N++DG YI+PAF+DK+ IH
Sbjct: 86  QRGKGMVDALFQGAVGLG-TQVVTMSSWDYVSTGQRTYNFDNMKDGLYIAPAFMDKLIIH 144

Query: 396 IAKNFMDLPKIKVPLILGIW 455
           IAKNFM+LP IKVPLILGIW
Sbjct: 145 IAKNFMNLPGIKVPLILGIW 164

[40][TOP]
>UniRef100_B9T427 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplast, putative n=1 Tax=Ricinus communis
           RepID=B9T427_RICCO
          Length = 474

 Score =  117 bits (293), Expect = 4e-25
 Identities = 64/124 (51%), Positives = 82/124 (66%), Gaps = 4/124 (3%)
 Frame = +3

Query: 96  ARVATRSVRRAQLQVVAS--SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFG 269
           +++  + +    L+V A    +KQ  + R      D SDDQQDITRG+ MVD LFQ   G
Sbjct: 42  SKIIHQKILSGNLKVSAEYDEQKQTDKDRWGGLAYDISDDQQDITRGKGMVDSLFQAPMG 101

Query: 270 AGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLI 443
            G TH AV+SS +YLSQ    +N  N  DGFYI+PAF+DK+ +HI KNF++LP IKVPLI
Sbjct: 102 TG-THYAVMSSYDYLSQGLRQYNLDNNMDGFYIAPAFMDKVVVHITKNFLNLPNIKVPLI 160

Query: 444 LGIW 455
           LGIW
Sbjct: 161 LGIW 164

[41][TOP]
>UniRef100_B9HT80 Predicted protein (Fragment) n=2 Tax=Populus trichocarpa
           RepID=B9HT80_POPTR
          Length = 424

 Score =  117 bits (292), Expect = 5e-25
 Identities = 61/103 (59%), Positives = 74/103 (71%), Gaps = 2/103 (1%)
 Frame = +3

Query: 153 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS 332
           +KQ  + R      D SDDQQDI+RG+ MVD LFQ   G G THN VL+S EYLSQ   +
Sbjct: 14  KKQTDKDRWGGLVTDMSDDQQDISRGKGMVDSLFQAPQGTG-THNPVLNSYEYLSQGLRT 72

Query: 333 FN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           +N  N  DGFYI+PAF+DK+ +HI+KNFM LP IKVPLILG+W
Sbjct: 73  YNLDNNMDGFYIAPAFMDKLVVHISKNFMSLPNIKVPLILGVW 115

[42][TOP]
>UniRef100_Q9ZT00 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=3 Tax=Zea mays RepID=RCA_MAIZE
          Length = 433

 Score =  117 bits (292), Expect = 5e-25
 Identities = 60/112 (53%), Positives = 79/112 (70%), Gaps = 2/112 (1%)
 Frame = +3

Query: 126 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 305
           A  +V  + +    RW+ +    D SDDQQDITRG+ +VD+LFQ   G  GTH AVLSS 
Sbjct: 52  AAKEVDETKQTDEDRWKGL--AYDISDDQQDITRGKGLVDNLFQAPMG-DGTHVAVLSSY 108

Query: 306 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           +Y+SQ + S+N  N+ DGFYI+  F+DK+ +H++KNFM LP IKVPLILGIW
Sbjct: 109 DYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIW 160

[43][TOP]
>UniRef100_C6T859 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6T859_SOYBN
          Length = 443

 Score =  116 bits (291), Expect = 7e-25
 Identities = 71/144 (49%), Positives = 88/144 (61%), Gaps = 13/144 (9%)
 Frame = +3

Query: 63  SSAVSG---QRVGGARVATRSVRRAQLQVVASSRKQ---------MGRWRSIDAGVDASD 206
           SSA  G   ++V  +RV    V     ++VA   K+           RW+ +    D SD
Sbjct: 29  SSAFFGTSLKKVIASRVPNSKVSGGSFKIVAVEEKKEIEETQQTDKDRWKGL--AYDISD 86

Query: 207 DQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDK 383
           DQQDITRG+ +VD LFQ    AG TH AV+SS EYLS   R   +N  DGFYI+PAF+DK
Sbjct: 87  DQQDITRGKGLVDSLFQAPQDAG-THYAVMSSYEYLSTGLRQYLDNKMDGFYIAPAFMDK 145

Query: 384 MTIHIAKNFMDLPKIKVPLILGIW 455
           + +HI+KNFM LP IKVPLILGIW
Sbjct: 146 LVVHISKNFMTLPNIKVPLILGIW 169

[44][TOP]
>UniRef100_B7EAB2 cDNA clone:J013001C24, full insert sequence n=2 Tax=Oryza sativa
           Japonica Group RepID=B7EAB2_ORYSJ
          Length = 433

 Score =  116 bits (291), Expect = 7e-25
 Identities = 61/98 (62%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 341
           RW+ +    D SDDQQDITRG+  VD LFQ   G  GTH AVLSS EYLSQ   +  F+N
Sbjct: 61  RWKGL--AYDISDDQQDITRGKGFVDSLFQAPTG-DGTHEAVLSSYEYLSQGLRTYDFDN 117

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
              GFYI+PAF+DK+ +HI+KNFM LP IKVPLILGIW
Sbjct: 118 TMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIW 155

[45][TOP]
>UniRef100_P93431 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=2 Tax=Oryza sativa RepID=RCA_ORYSJ
          Length = 466

 Score =  116 bits (291), Expect = 7e-25
 Identities = 61/98 (62%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 341
           RW+ +    D SDDQQDITRG+  VD LFQ   G  GTH AVLSS EYLSQ   +  F+N
Sbjct: 61  RWKGL--AYDISDDQQDITRGKGFVDSLFQAPTG-DGTHEAVLSSYEYLSQGLRTYDFDN 117

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
              GFYI+PAF+DK+ +HI+KNFM LP IKVPLILGIW
Sbjct: 118 TMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIW 155

[46][TOP]
>UniRef100_A7NYV5 Chromosome chr6 scaffold_3, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7NYV5_VITVI
          Length = 472

 Score =  116 bits (290), Expect = 9e-25
 Identities = 60/109 (55%), Positives = 75/109 (68%), Gaps = 2/109 (1%)
 Frame = +3

Query: 135 QVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYL 314
           ++  + + +  RW+ +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS EYL
Sbjct: 59  EIDENEQTEKDRWKGL--AYDVSDDQQDITRGKGMVDSLFQAPMQSG-THYAVMSSYEYL 115

Query: 315 SQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           S     +N  N  DGFYI+PAF+DK+ +HI KNFM LP IKVPLILGIW
Sbjct: 116 STGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIW 164

[47][TOP]
>UniRef100_A5C3D4 Putative uncharacterized protein n=1 Tax=Vitis vinifera
           RepID=A5C3D4_VITVI
          Length = 472

 Score =  116 bits (290), Expect = 9e-25
 Identities = 60/109 (55%), Positives = 75/109 (68%), Gaps = 2/109 (1%)
 Frame = +3

Query: 135 QVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYL 314
           ++  + + +  RW+ +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS EYL
Sbjct: 59  EIDENEQTEKDRWKGL--AYDVSDDQQDITRGKGMVDSLFQAPMQSG-THYAVMSSYEYL 115

Query: 315 SQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           S     +N  N  DGFYI+PAF+DK+ +HI KNFM LP IKVPLILGIW
Sbjct: 116 STGLRQYNLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIW 164

[48][TOP]
>UniRef100_Q06B50 Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase large protein isoform n=2 Tax=Acer rubrum
           RepID=Q06B50_ACERU
          Length = 474

 Score =  115 bits (289), Expect = 1e-24
 Identities = 66/141 (46%), Positives = 86/141 (60%), Gaps = 7/141 (4%)
 Frame = +3

Query: 54  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVA----SSRKQMGRWRSIDAGVDASDDQQ 215
           T+ +SA  G  +    +R     V     +VVA    + + +  +WR +    D SDDQQ
Sbjct: 27  TVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGL--AYDTSDDQQ 84

Query: 216 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTI 392
           DITRG+ +VD LFQ   G G TH AV+SS +Y+S   R    N  DGFYI+PAF+DK+ +
Sbjct: 85  DITRGKGLVDSLFQAPSGTG-THYAVMSSYDYISTGLRTYLENSMDGFYIAPAFMDKLVV 143

Query: 393 HIAKNFMDLPKIKVPLILGIW 455
           HI KNFM LP IK+PLILGIW
Sbjct: 144 HITKNFMSLPNIKIPLILGIW 164

[49][TOP]
>UniRef100_Q7X9A2 Rubisco activase alpha form n=1 Tax=Deschampsia antarctica
           RepID=Q7X9A2_DESAN
          Length = 465

 Score =  115 bits (287), Expect = 2e-24
 Identities = 57/98 (58%), Positives = 72/98 (73%), Gaps = 2/98 (2%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--RASFNN 341
           +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +  F+N
Sbjct: 61  KWKGL--AYDISDDQQDITRGKGIVDSLFQAPMG-DGTHEAVLSSYEYVSQGLKKYDFDN 117

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
              GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIW
Sbjct: 118 TMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIW 155

[50][TOP]
>UniRef100_Q7X9A1 Rubisco activase beta form n=1 Tax=Deschampsia antarctica
           RepID=Q7X9A1_DESAN
          Length = 428

 Score =  115 bits (287), Expect = 2e-24
 Identities = 57/98 (58%), Positives = 72/98 (73%), Gaps = 2/98 (2%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--RASFNN 341
           +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +  F+N
Sbjct: 61  KWKGL--AYDISDDQQDITRGKGIVDSLFQAPMG-DGTHEAVLSSYEYVSQGLKKYDFDN 117

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
              GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIW
Sbjct: 118 TMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIW 155

[51][TOP]
>UniRef100_Q05C31 Putative uncharacterized protein n=1 Tax=Homo sapiens
           RepID=Q05C31_HUMAN
          Length = 427

 Score =  115 bits (287), Expect = 2e-24
 Identities = 57/103 (55%), Positives = 74/103 (71%), Gaps = 2/103 (1%)
 Frame = +3

Query: 153 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 326
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +
Sbjct: 55  KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLKK 111

Query: 327 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
             F+N   GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIW
Sbjct: 112 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIW 154

[52][TOP]
>UniRef100_Q40281 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Malus x domestica RepID=RCA_MALDO
          Length = 437

 Score =  115 bits (287), Expect = 2e-24
 Identities = 62/126 (49%), Positives = 82/126 (65%), Gaps = 6/126 (4%)
 Frame = +3

Query: 96  ARVATRSVRRAQLQVVAS----SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGG 263
           +R     V    L++VAS     +    RW+ +    D SDDQQDITRG+  VD LFQ  
Sbjct: 42  SRFTNSKVSSGSLRIVASVDEDKQTDKDRWKGL--AFDTSDDQQDITRGKGKVDSLFQAP 99

Query: 264 FGAGGTHNAVLSSQEYLSQS--RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVP 437
            G+G TH A++SS EY+S    + +F+N  DG+YI+PAF+DK+ +HI KNFM LP +KVP
Sbjct: 100 QGSG-THFAIMSSYEYISTGLRQYNFDNNMDGYYIAPAFMDKLVVHITKNFMTLPNMKVP 158

Query: 438 LILGIW 455
           LILGIW
Sbjct: 159 LILGIW 164

[53][TOP]
>UniRef100_Q9AXG1 Ribulose-1,5-bisphosphate carboxylase/oxygenase activase 1 n=1
           Tax=Gossypium hirsutum RepID=Q9AXG1_GOSHI
          Length = 438

 Score =  114 bits (286), Expect = 3e-24
 Identities = 59/112 (52%), Positives = 76/112 (67%), Gaps = 2/112 (1%)
 Frame = +3

Query: 126 AQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQ 305
           A  ++   ++    RW+ +    D SDDQQDITRG+ MVD LFQ      GTH AV+SS 
Sbjct: 59  AAKEIDEDTQTDQDRWKGL--AYDISDDQQDITRGKGMVDSLFQAPMN-DGTHYAVMSSY 115

Query: 306 EYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           EY+SQ   +++  N  DGFYI+PAF+DK+ +HI KN+M LP IKVPLILGIW
Sbjct: 116 EYISQGLRTYDLDNNMDGFYIAPAFMDKLVVHITKNYMTLPNIKVPLILGIW 167

[54][TOP]
>UniRef100_Q40073 Ribulose bisphosphate carboxylase/oxygenase activase A,
           chloroplastic n=2 Tax=Hordeum vulgare RepID=RCAA_HORVU
          Length = 464

 Score =  114 bits (286), Expect = 3e-24
 Identities = 57/103 (55%), Positives = 74/103 (71%), Gaps = 2/103 (1%)
 Frame = +3

Query: 153 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 326
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G G TH AVLSS EY+SQ   +
Sbjct: 55  KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTGHG-THEAVLSSYEYVSQGLRK 111

Query: 327 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
             F+N   GFYI+PAF+DK+ +H++KNFM LP IK+PLILGIW
Sbjct: 112 YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIW 154

[55][TOP]
>UniRef100_O82428 Rubisco activase n=1 Tax=Datisca glomerata RepID=O82428_DATGL
          Length = 373

 Score =  114 bits (284), Expect = 4e-24
 Identities = 64/123 (52%), Positives = 77/123 (62%), Gaps = 3/123 (2%)
 Frame = +3

Query: 96  ARVATRSVRRAQLQVVASS--RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFG 269
           +R+    +    ++ VA     KQ  + R      D SDDQQDITRG+ MVD LFQ    
Sbjct: 43  SRLTNPRIAAGNIKAVADDDEEKQTSKDRWGGLAFDTSDDQQDITRGKGMVDSLFQAPMQ 102

Query: 270 AGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLIL 446
            G TH AV+SS EYLS   R   +N  DGFYI+PAF+DK+ +HI KNFM LP IKVPLIL
Sbjct: 103 TG-THYAVMSSYEYLSTGLRQYLDNNMDGFYIAPAFMDKLVVHITKNFMTLPNIKVPLIL 161

Query: 447 GIW 455
           GIW
Sbjct: 162 GIW 164

[56][TOP]
>UniRef100_C1K241 Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase n=1 Tax=Solenostemon scutellarioides
           RepID=C1K241_SOLSC
          Length = 436

 Score =  114 bits (284), Expect = 4e-24
 Identities = 58/118 (49%), Positives = 82/118 (69%), Gaps = 5/118 (4%)
 Frame = +3

Query: 117 VRRAQLQVVASSRKQM--GRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNA 290
           V     +VVA ++K     RW  +    D SDDQQDI RG+ MVD LFQ   G G TH+A
Sbjct: 48  VSSGSFKVVAEAKKPSPGDRWGGLIE--DVSDDQQDIVRGKGMVDSLFQAPSGMG-THDA 104

Query: 291 VLSSQEYLSQSRASFNNIE---DGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           +++S EY+SQ + ++++++   DG YI+PAF+DK+ +H++KNFM LP IKVPLILG+W
Sbjct: 105 IMNSYEYISQGQKTYDHLDNTLDGLYIAPAFMDKLVVHLSKNFMTLPNIKVPLILGVW 162

[57][TOP]
>UniRef100_A7PIQ8 Chromosome chr13 scaffold_17, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7PIQ8_VITVI
          Length = 438

 Score =  114 bits (284), Expect = 4e-24
 Identities = 68/142 (47%), Positives = 84/142 (59%), Gaps = 8/142 (5%)
 Frame = +3

Query: 54  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVASSRKQM----GRWRSIDAGVDASDDQQ 215
           ++ SSA  G  +    +R     V     +VVA     M     +W+ +    D SDDQQ
Sbjct: 27  SVPSSAFLGSSLKKVNSRFTHSKVSSGSFKVVAEVDDDMQTEKDKWKGL--AFDTSDDQQ 84

Query: 216 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMT 389
           DI RG+ MVD LFQ    AG TH AV+SS EY+S     +N  N  DGFYI+PAF+DK+ 
Sbjct: 85  DIVRGKGMVDSLFQAPMDAG-THYAVMSSYEYISTGLRQYNLDNNMDGFYIAPAFMDKLV 143

Query: 390 IHIAKNFMDLPKIKVPLILGIW 455
           +HI KNFM LP IKVPLILGIW
Sbjct: 144 VHITKNFMTLPNIKVPLILGIW 165

[58][TOP]
>UniRef100_B9SDY7 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplast, putative n=1 Tax=Ricinus communis
           RepID=B9SDY7_RICCO
          Length = 473

 Score =  113 bits (283), Expect = 6e-24
 Identities = 60/98 (61%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 341
           RW  +    D SDDQQDITRG+ MVD LFQ    AG TH AV+SS EYLS     +N  N
Sbjct: 69  RWGGL--AYDMSDDQQDITRGKGMVDSLFQAPQDAG-THYAVMSSYEYLSTGLRQYNLDN 125

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
             DGFYI+PAF+DK+ +HI KNFM LP IK+PLILGIW
Sbjct: 126 NMDGFYIAPAFMDKLVVHITKNFMTLPNIKIPLILGIW 163

[59][TOP]
>UniRef100_A9TLG8 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TLG8_PHYPA
          Length = 410

 Score =  113 bits (283), Expect = 6e-24
 Identities = 58/102 (56%), Positives = 75/102 (73%), Gaps = 2/102 (1%)
 Frame = +3

Query: 156 KQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASF 335
           K++ RW  +  G D SDDQQDI RG+ MVD LFQG  G G T    +SS +Y+S  + ++
Sbjct: 31  KKVDRWAGL--GNDISDDQQDIQRGKGMVDALFQGAVGLG-TQVVTMSSWDYVSTGQRTY 87

Query: 336 N--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           N  N++DG YI+PAF+DK+ IHIAKNFM+LP IKVPLILG+W
Sbjct: 88  NFDNMKDGLYIAPAFMDKLIIHIAKNFMNLPGIKVPLILGVW 129

[60][TOP]
>UniRef100_A7PNR4 Chromosome chr8 scaffold_23, whole genome shotgun sequence n=2
           Tax=Vitis vinifera RepID=A7PNR4_VITVI
          Length = 474

 Score =  113 bits (283), Expect = 6e-24
 Identities = 66/140 (47%), Positives = 85/140 (60%), Gaps = 6/140 (4%)
 Frame = +3

Query: 54  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVAS--SRKQMGRWRSIDAGVDASDDQQDI 221
           ++ SSA  G  +    +++A         +VVA     KQ  + +      D SDDQQDI
Sbjct: 26  SVPSSAFLGNSLKKVSSKIAHPRTSSGNFKVVAEVDEEKQTSKDKWKGLAFDESDDQQDI 85

Query: 222 TRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIH 395
           TRG+ MVD LFQ    +G TH AV+SS +Y+S     +N  N  DGFYI+PAF+DK+ +H
Sbjct: 86  TRGKGMVDSLFQAPMDSG-THYAVMSSYDYISTGLRQYNLDNTMDGFYIAPAFMDKLVVH 144

Query: 396 IAKNFMDLPKIKVPLILGIW 455
           I KNFM LP IKVPLILGIW
Sbjct: 145 ITKNFMTLPNIKVPLILGIW 164

[61][TOP]
>UniRef100_C6YBD7 Chloroplast ribulose-1,5-bisphosphate carboxylase activase
           (Fragment) n=1 Tax=Triticum aestivum RepID=C6YBD7_WHEAT
          Length = 360

 Score =  112 bits (281), Expect = 1e-23
 Identities = 56/103 (54%), Positives = 73/103 (70%), Gaps = 2/103 (1%)
 Frame = +3

Query: 153 RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 326
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +
Sbjct: 24  KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLKK 80

Query: 327 ASFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
             F+N   GFYI+PAF+DK+ +H++KNFM LP IK+P ILGIW
Sbjct: 81  YDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPRILGIW 123

[62][TOP]
>UniRef100_Q7X999 Ribulose bisphosphate carboxylase/oxygenase activase 2,
           chloroplastic n=1 Tax=Larrea tridentata RepID=RCA2_LARTR
          Length = 435

 Score =  112 bits (281), Expect = 1e-23
 Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 341
           +W+ +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS +Y+SQ    +N  N
Sbjct: 70  KWKGL--AYDISDDQQDITRGKGMVDTLFQAPMQSG-THYAVMSSYDYISQGLRQYNLDN 126

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
             DGFYI+PAF+DK+ +HI KNF+ LP IK+PLILGIW
Sbjct: 127 NMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIW 164

[63][TOP]
>UniRef100_Q7X9A0 Ribulose bisphosphate carboxylase/oxygenase activase 1,
           chloroplastic n=1 Tax=Larrea tridentata RepID=RCA1_LARTR
          Length = 476

 Score =  112 bits (281), Expect = 1e-23
 Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--N 341
           +W+ +    D SDDQQDITRG+ MVD LFQ    +G TH AV+SS +Y+SQ    +N  N
Sbjct: 70  KWKGL--AYDISDDQQDITRGKGMVDTLFQAPMQSG-THYAVMSSYDYISQGLRQYNLDN 126

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
             DGFYI+PAF+DK+ +HI KNF+ LP IK+PLILGIW
Sbjct: 127 NMDGFYIAPAFMDKLVVHITKNFLSLPNIKIPLILGIW 164

[64][TOP]
>UniRef100_Q06B48 Chloroplast ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase large protein isoform n=2 Tax=Acer rubrum
           RepID=Q06B48_ACERU
          Length = 474

 Score =  111 bits (278), Expect = 2e-23
 Identities = 64/141 (45%), Positives = 84/141 (59%), Gaps = 7/141 (4%)
 Frame = +3

Query: 54  TMKSSAVSGQRVG--GARVATRSVRRAQLQVVA----SSRKQMGRWRSIDAGVDASDDQQ 215
           T+ +SA  G  +    +R     V     +VVA    + + +  +WR +    D SDDQQ
Sbjct: 27  TVPTSAFFGTSLKKVASRFPNPKVHSGSFKVVAEIDENKQTEKDKWRGL--AYDTSDDQQ 84

Query: 216 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS-RASFNNIEDGFYISPAFLDKMTI 392
           DITRG+ +VD LFQ   G  GTH AV+SS +Y+S   R    N  DGFYI+P F+ K+ +
Sbjct: 85  DITRGKGLVDSLFQAPSGT-GTHYAVMSSYDYISTGLRTYLENSMDGFYIAPVFMGKLVV 143

Query: 393 HIAKNFMDLPKIKVPLILGIW 455
           HI KNFM LP IK+PLILGIW
Sbjct: 144 HITKNFMSLPNIKIPLILGIW 164

[65][TOP]
>UniRef100_O49074 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=1 Tax=Solanum pennellii RepID=RCA_SOLPN
          Length = 459

 Score =  111 bits (278), Expect = 2e-23
 Identities = 60/129 (46%), Positives = 86/129 (66%), Gaps = 4/129 (3%)
 Frame = +3

Query: 81  QRVGGARVATRSVRRAQLQVVASS--RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLF 254
           ++V    V++  V    L+VVA      +  RW+ +    + SDDQQDI RG+ +VD LF
Sbjct: 38  KKVYAKGVSSPKVSNRNLRVVAQEVDETKEDRWKGLYD--NTSDDQQDIARGKGLVDSLF 95

Query: 255 QGGFGAGGTHNAVLSSQEYLSQSRASF--NNIEDGFYISPAFLDKMTIHIAKNFMDLPKI 428
           Q   G G TH+A+++S EY+SQ+  ++  +N  DGFYI+PAF+DK+ +HI KNF+ LP I
Sbjct: 96  QAPTGTG-THHAIMNSYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITKNFLTLPNI 154

Query: 429 KVPLILGIW 455
           KVPLILG+W
Sbjct: 155 KVPLILGVW 163

[66][TOP]
>UniRef100_Q9M431 Rubisco activase (Fragment) n=1 Tax=Pinus halepensis
           RepID=Q9M431_PINHA
          Length = 226

 Score =  110 bits (275), Expect = 5e-23
 Identities = 53/86 (61%), Positives = 68/86 (79%), Gaps = 2/86 (2%)
 Frame = +3

Query: 204 DDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLS--QSRASFNNIEDGFYISPAFL 377
           DDQQDI RG+  VD LFQ   G+G THNA++SS +Y+S  Q   S +N+ DG+YI+PAF+
Sbjct: 1   DDQQDIRRGKGKVDSLFQAPMGSG-THNAIMSSYDYISTAQRTYSLDNMMDGYYIAPAFM 59

Query: 378 DKMTIHIAKNFMDLPKIKVPLILGIW 455
           DK+ +HI+KNFM+LP IKVPLILGIW
Sbjct: 60  DKLVVHISKNFMNLPNIKVPLILGIW 85

[67][TOP]
>UniRef100_A9NZT0 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=A9NZT0_PICSI
          Length = 363

 Score =  109 bits (272), Expect = 1e-22
 Identities = 52/98 (53%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 341
           +W+ +    D SDDQ DI RG+  VD LFQ   G+G THN V+S+ +Y+S ++ +  F+N
Sbjct: 73  KWKGL--AFDESDDQMDIRRGKGKVDSLFQAPMGSG-THNVVMSTYDYISTAQRTYDFDN 129

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
             DG+YI+P+F+DK+ +HI+KNFM+LP IKVPLILGIW
Sbjct: 130 TMDGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIW 167

[68][TOP]
>UniRef100_A9NV87 Putative uncharacterized protein n=2 Tax=Picea sitchensis
           RepID=A9NV87_PICSI
          Length = 480

 Score =  109 bits (272), Expect = 1e-22
 Identities = 52/98 (53%), Positives = 73/98 (74%), Gaps = 2/98 (2%)
 Frame = +3

Query: 168 RWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNN 341
           +W+ +    D SDDQ DI RG+  VD LFQ   G+G THN V+S+ +Y+S ++ +  F+N
Sbjct: 73  KWKGL--AFDESDDQMDIRRGKGKVDSLFQAPMGSG-THNVVMSTYDYISTAQRTYDFDN 129

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
             DG+YI+P+F+DK+ +HI+KNFM+LP IKVPLILGIW
Sbjct: 130 TMDGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIW 167

[69][TOP]
>UniRef100_Q8L5T3 Rubisco activase n=1 Tax=Chenopodium quinoa RepID=Q8L5T3_CHEQI
          Length = 438

 Score =  100 bits (249), Expect = 5e-20
 Identities = 56/122 (45%), Positives = 76/122 (62%), Gaps = 2/122 (1%)
 Frame = +3

Query: 96  ARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAG 275
           +R ++ +V+ A  +   S +    RW  +    D SDDQ DI RG+ MVD LFQ    +G
Sbjct: 49  SRASSMTVKAADYE--ESKQSNTDRWAHL--ATDISDDQLDIRRGKGMVDSLFQAPMDSG 104

Query: 276 GTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILG 449
            TH  V SS EY SQ    +N  N+   FYI+P+F+DK+ +HI KN+++LP IKVPLILG
Sbjct: 105 -THVPVQSSLEYESQGLRKYNIDNMLGNFYIAPSFMDKIVVHITKNYLNLPNIKVPLILG 163

Query: 450 IW 455
           IW
Sbjct: 164 IW 165

[70][TOP]
>UniRef100_C0PQ99 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=C0PQ99_PICSI
          Length = 368

 Score = 98.2 bits (243), Expect = 3e-19
 Identities = 46/82 (56%), Positives = 64/82 (78%), Gaps = 2/82 (2%)
 Frame = +3

Query: 216 DITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRAS--FNNIEDGFYISPAFLDKMT 389
           DI RG+  VD LFQ   G+G THN V+S+ +Y+S ++ +  F+N  DG+YI+P+F+DK+ 
Sbjct: 2   DIRRGKGKVDSLFQAPMGSG-THNVVMSTYDYISTAQRTYDFDNTMDGYYIAPSFMDKLL 60

Query: 390 IHIAKNFMDLPKIKVPLILGIW 455
           +HI+KNFM+LP IKVPLILGIW
Sbjct: 61  VHISKNFMNLPNIKVPLILGIW 82

[71][TOP]
>UniRef100_P10871 Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic
           n=2 Tax=Spinacia oleracea RepID=RCA_SPIOL
          Length = 472

 Score = 97.4 bits (241), Expect = 4e-19
 Identities = 53/116 (45%), Positives = 71/116 (61%), Gaps = 2/116 (1%)
 Frame = +3

Query: 114 SVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAV 293
           S R   + V A+  ++    +      D SDDQ DI RG+ MVD LFQ    AG TH  +
Sbjct: 48  SSRTTSMTVKAAENEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAG-THVPI 106

Query: 294 LSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
            SS EY SQ    ++  N+   FYI+PAF+DK+ +HI KNF++LP IK+PLILG+W
Sbjct: 107 QSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVW 162

[72][TOP]
>UniRef100_B9IFW9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IFW9_POPTR
          Length = 476

 Score = 95.9 bits (237), Expect = 1e-18
 Identities = 52/122 (42%), Positives = 75/122 (61%), Gaps = 2/122 (1%)
 Frame = +3

Query: 72  VSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVDASDDQQDITRGREMVDDL 251
           V G ++   R+ TR+++ A  +     +    +W+ +    D SDDQQDITRG+ MVD L
Sbjct: 40  VLGSKITNQRLLTRNLKLAA-EYDKEKQPSKDKWKGL--AFDTSDDQQDITRGKGMVDSL 96

Query: 252 FQGGFGAGGTHNAVLSSQEYLSQSRASF--NNIEDGFYISPAFLDKMTIHIAKNFMDLPK 425
           FQ   G G TH AV+SS +Y S+    +  +N  DGFYI+ +F+DK+ +HI KNF+ LP 
Sbjct: 97  FQAPMGTG-THYAVMSSYDYTSKGLRQYKLDNNMDGFYIASSFMDKLVVHITKNFLQLPN 155

Query: 426 IK 431
           IK
Sbjct: 156 IK 157

[73][TOP]
>UniRef100_Q9ATC1 Rubisco activase (Fragment) n=1 Tax=Zantedeschia aethiopica
           RepID=Q9ATC1_ZANAE
          Length = 334

 Score = 83.6 bits (205), Expect = 6e-15
 Identities = 39/61 (63%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
 Frame = +3

Query: 279 THNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGI 452
           THN VLSS EY+S    SFN  N  +G YI+PAF+DK+ +HI KNFM+LP IK+PLILGI
Sbjct: 1   THNPVLSSYEYISTGLRSFNLDNTVNGLYIAPAFMDKLVVHITKNFMNLPNIKIPLILGI 60

Query: 453 W 455
           W
Sbjct: 61  W 61

[74][TOP]
>UniRef100_A6H5A0 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H5A0_VIGUN
          Length = 236

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 29/42 (69%), Positives = 38/42 (90%)
 Frame = +3

Query: 330 SFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           +F+N++DG+YI+PAF+DK+ +HI KNFM LP IKVPLILGIW
Sbjct: 11  NFDNMKDGYYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIW 52

[75][TOP]
>UniRef100_A6H599 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H599_VIGUN
          Length = 214

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 29/42 (69%), Positives = 38/42 (90%)
 Frame = +3

Query: 330 SFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           +F+N++DG+YI+PAF+DK+ +HI KNFM LP IKVPLILGIW
Sbjct: 22  NFDNMKDGYYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIW 63

[76][TOP]
>UniRef100_A6H596 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H596_VIGUN
          Length = 251

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 29/42 (69%), Positives = 38/42 (90%)
 Frame = +3

Query: 330 SFNNIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           +F+N++DG+YI+PAF+DK+ +HI KNFM LP IKVPLILGIW
Sbjct: 11  NFDNMKDGYYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIW 52

[77][TOP]
>UniRef100_A6H5A1 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H5A1_VIGUN
          Length = 194

 Score = 66.6 bits (161), Expect = 8e-10
 Identities = 27/38 (71%), Positives = 34/38 (89%)
 Frame = +3

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           ++DG+YI+PAF+DK+ +HI KNFM LP IKVPLILGIW
Sbjct: 1   MKDGYYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIW 38

[78][TOP]
>UniRef100_A6H598 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H598_VIGUN
          Length = 244

 Score = 66.6 bits (161), Expect = 8e-10
 Identities = 27/38 (71%), Positives = 34/38 (89%)
 Frame = +3

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           ++DG+YI+PAF+DK+ +HI KNFM LP IKVPLILGIW
Sbjct: 1   MKDGYYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIW 38

[79][TOP]
>UniRef100_A6H597 Putative rubisco activase (Fragment) n=1 Tax=Vigna unguiculata
           RepID=A6H597_VIGUN
          Length = 229

 Score = 66.6 bits (161), Expect = 8e-10
 Identities = 27/38 (71%), Positives = 34/38 (89%)
 Frame = +3

Query: 342 IEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           ++DG+YI+PAF+DK+ +HI KNFM LP IKVPLILGIW
Sbjct: 1   MKDGYYIAPAFMDKLVVHITKNFMTLPNIKVPLILGIW 38

[80][TOP]
>UniRef100_A9NXN4 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=A9NXN4_PICSI
          Length = 310

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 26/36 (72%), Positives = 34/36 (94%)
 Frame = +3

Query: 348 DGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           DG+YI+P+F+DK+ +HI+KNFM+LP IKVPLILGIW
Sbjct: 2   DGYYIAPSFMDKLLVHISKNFMNLPNIKVPLILGIW 37

[81][TOP]
>UniRef100_Q9SX18 Rubisco activase (Fragment) n=1 Tax=Datisca glomerata
           RepID=Q9SX18_DATGL
          Length = 244

 Score = 63.2 bits (152), Expect = 9e-09
 Identities = 26/35 (74%), Positives = 30/35 (85%)
 Frame = +3

Query: 351 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           GFYI+PAF+DK+ +HI KNFM  P IKVPLILGIW
Sbjct: 1   GFYIAPAFMDKLVVHITKNFMTFPNIKVPLILGIW 35

[82][TOP]
>UniRef100_Q45YI8 Rubisco activase 2 n=1 Tax=Mesembryanthemum crystallinum
           RepID=Q45YI8_MESCR
          Length = 456

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
 Frame = +3

Query: 198 ASDDQQDITRGRE--MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPA 371
           A  D  +IT G    ++DDLF G F  G   + V    +Y  +   SF  +   +YI+P 
Sbjct: 110 AEADNTNITVGARPGVIDDLFTGNF-LGRDSDIVF---DYRQKVTRSFEYLRGDYYIAPV 165

Query: 372 FLDKMTIHIAKNFM-DLPKIKVPLILGIW 455
           FLD++  HI KNFM  L  +KVPLILGIW
Sbjct: 166 FLDQVVCHIVKNFMAHLLNVKVPLILGIW 194

[83][TOP]
>UniRef100_C5Y9J8 Putative uncharacterized protein Sb06g031390 n=1 Tax=Sorghum
           bicolor RepID=C5Y9J8_SORBI
          Length = 433

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 11/106 (10%)
 Frame = +3

Query: 171 WRSIDAGVD-------ASDDQQDITRGRE--MVDDLFQGGFGAGGTHNAVLSSQEYLSQS 323
           W S DA  D          D  ++T G    +VDDLF G F  G   + V    +Y  ++
Sbjct: 71  WESKDAEGDDYLYRLGKEADNLNVTVGARAGIVDDLFVGNF-LGKDSDIVF---DYRQKA 126

Query: 324 RASFNNIEDGFYISPAFLDKMTIHIAKNFMD--LPKIKVPLILGIW 455
             +F  ++  +YI+PAFLDK+  HI KN++   L  IK+PLILG+W
Sbjct: 127 TRTFEYLQGDYYIAPAFLDKVACHIVKNYIGHLLNNIKIPLILGVW 172

[84][TOP]
>UniRef100_Q9AST9 At1g73110/F3N23_39 n=1 Tax=Arabidopsis thaliana RepID=Q9AST9_ARATH
          Length = 432

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
 Frame = +3

Query: 198 ASDDQQDITRGRE--MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPA 371
           A  D  +I  G    M+DD+F G F  G   + V    +Y  ++  SF +++  +YI+P+
Sbjct: 86  AESDNVNIAVGARSGMIDDVFIGDF-LGKDSDIVF---DYRQKATRSFEHLQGDYYIAPS 141

Query: 372 FLDKMTIHIAKNFM-DLPKIKVPLILGIW 455
           FLDK+ +HI KN++     IK+PLILGIW
Sbjct: 142 FLDKVAVHIVKNYLAPSLNIKIPLILGIW 170

[85][TOP]
>UniRef100_Q9FUI0 Ribulose 1,5-bisphosphate carboxylase/oxygenase activase (Fragment)
           n=1 Tax=Zea mays RepID=Q9FUI0_MAIZE
          Length = 308

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = +3

Query: 351 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           GFYI+  F+DK+ +H++KNFM LP IKVPLILGIW
Sbjct: 1   GFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIW 35

[86][TOP]
>UniRef100_B8HYF8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Cyanothece
           sp. PCC 7425 RepID=B8HYF8_CYAP4
          Length = 423

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 23/34 (67%), Positives = 31/34 (91%)
 Frame = +3

Query: 351 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGI 452
           G+YI+P FLDK+++HI KN++DLP +KVPLILGI
Sbjct: 2   GYYIAPRFLDKLSVHITKNYLDLPNVKVPLILGI 35

[87][TOP]
>UniRef100_B5W427 Ribulose bisphosphate carboxylase small chain n=1 Tax=Arthrospira
           maxima CS-328 RepID=B5W427_SPIMA
          Length = 434

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 24/33 (72%), Positives = 31/33 (93%)
 Frame = +3

Query: 354 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGI 452
           +YISP FLDK+++HI KNF+D+P+IKVPLILGI
Sbjct: 3   YYISPRFLDKVSVHITKNFLDIPRIKVPLILGI 35

[88][TOP]
>UniRef100_B0CCB7 Ribulose bisphosphate carboxylase activase, putative n=1
           Tax=Acaryochloris marina MBIC11017 RepID=B0CCB7_ACAM1
          Length = 416

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 23/34 (67%), Positives = 30/34 (88%)
 Frame = +3

Query: 351 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGI 452
           G+Y+SP FLD++ +HI KNFMDLP ++VPLILGI
Sbjct: 2   GYYLSPRFLDRLAVHITKNFMDLPGLRVPLILGI 35

[89][TOP]
>UniRef100_Q7XN85 Os04g0658300 protein n=1 Tax=Oryza sativa Japonica Group
           RepID=Q7XN85_ORYSJ
          Length = 441

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
 Frame = +3

Query: 237 MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM- 413
           +VDDLF G F  G   + V    +Y  ++  +F  ++  +YI+P FLDK+  HI KN++ 
Sbjct: 110 IVDDLFVGNF-LGKDSDIVF---DYRQKATRTFEYLQGDYYIAPLFLDKVACHIVKNYLA 165

Query: 414 DLPKIKVPLILGIW 455
            +  IK+PLILGIW
Sbjct: 166 HILTIKIPLILGIW 179

[90][TOP]
>UniRef100_Q01HZ5 OSIGBa0132E09-OSIGBa0108L24.4 protein n=1 Tax=Oryza sativa
           RepID=Q01HZ5_ORYSA
          Length = 441

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
 Frame = +3

Query: 237 MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM- 413
           +VDDLF G F  G   + V    +Y  ++  +F  ++  +YI+P FLDK+  HI KN++ 
Sbjct: 110 IVDDLFVGNF-LGKDSDIVF---DYRQKATRTFEYLQGDYYIAPLFLDKVACHIVKNYLA 165

Query: 414 DLPKIKVPLILGIW 455
            +  IK+PLILGIW
Sbjct: 166 HILTIKIPLILGIW 179

[91][TOP]
>UniRef100_B9FCX4 Putative uncharacterized protein n=1 Tax=Oryza sativa Japonica
           Group RepID=B9FCX4_ORYSJ
          Length = 456

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
 Frame = +3

Query: 237 MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM- 413
           +VDDLF G F  G   + V    +Y  ++  +F  ++  +YI+P FLDK+  HI KN++ 
Sbjct: 110 IVDDLFVGNF-LGKDSDIVF---DYRQKATRTFEYLQGDYYIAPLFLDKVACHIVKNYLA 165

Query: 414 DLPKIKVPLILGIW 455
            +  IK+PLILGIW
Sbjct: 166 HILTIKIPLILGIW 179

[92][TOP]
>UniRef100_B8AVM5 Putative uncharacterized protein n=1 Tax=Oryza sativa Indica Group
           RepID=B8AVM5_ORYSI
          Length = 456

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
 Frame = +3

Query: 237 MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM- 413
           +VDDLF G F  G   + V    +Y  ++  +F  ++  +YI+P FLDK+  HI KN++ 
Sbjct: 110 IVDDLFVGNF-LGKDSDIVF---DYRQKATRTFEYLQGDYYIAPLFLDKVACHIVKNYLA 165

Query: 414 DLPKIKVPLILGIW 455
            +  IK+PLILGIW
Sbjct: 166 HILTIKIPLILGIW 179

[93][TOP]
>UniRef100_UPI000198412C PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI000198412C
          Length = 442

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
 Frame = +3

Query: 18  PFIQSALRTMQVTMKSSAVSGQRVGGARVATRSVRRAQLQVVASSRKQMGRWRSIDAGVD 197
           PF   AL +      +   +G   G  R++ +S   A        +   GR      G +
Sbjct: 46  PFSLRALNSSNNDNPTGESAGGEAGQRRISEQSSWEA--------KDSEGRDYLYRLGKE 97

Query: 198 ASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFL 377
           A +    +     ++DDLF G F  G   + V    +Y  +   SF  ++  +YI+P F+
Sbjct: 98  ADNMNIAVGARAGIIDDLFVGNF-LGRDSDIVF---DYRQKVTRSFEYLQGDYYIAPVFM 153

Query: 378 DKMTIHIAKNFM-DLPKIKVPLILGIW 455
           DK+  HI KN++  L    VPLILGIW
Sbjct: 154 DKVVCHIVKNYIAHLLNTNVPLILGIW 180

[94][TOP]
>UniRef100_C1MW61 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1MW61_9CHLO
          Length = 498

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 2/93 (2%)
 Frame = +3

Query: 183 DAGVDASDDQQDITRGREMVDDLFQGGFGAGGT--HNAVLSSQEYLSQSRASFNNIEDGF 356
           + G  +S+ + ++   + +VDD+F G   A      +A +++ E       S  N+ DG 
Sbjct: 93  ELGRQSSNLRTEVGARKGVVDDVFAGTANANFVLGADADIATGELRYTEARSLTNVVDGC 152

Query: 357 YISPAFLDKMTIHIAKNFMDLPKIKVPLILGIW 455
           Y+ P F+DK+ +H+ KN +     +VPLILGIW
Sbjct: 153 YVPPRFMDKVCVHLVKNHLAEGVGQVPLILGIW 185

[95][TOP]
>UniRef100_A9TYZ9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TYZ9_PHYPA
          Length = 458

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 35/86 (40%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
 Frame = +3

Query: 207 DQQDITRGRE--MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLD 380
           D  +IT G    M+D LF G F  G   + V    +Y  +   SF +I   +YI+PAF+D
Sbjct: 104 DNLNITVGARTGMIDSLFTGDF-LGKEADIVF---KYRQKVTRSFEHITGDYYIAPAFMD 159

Query: 381 KMTIHIAKNFMDLP-KIKVPLILGIW 455
           K+  HI KN++      KVPLILG+W
Sbjct: 160 KVVTHIVKNYLAAQIDGKVPLILGVW 185

[96][TOP]
>UniRef100_Q115H0 Ribulose 1,5-bisphosphate carboxylase small subunit n=1
           Tax=Trichodesmium erythraeum IMS101 RepID=Q115H0_TRIEI
          Length = 423

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 20/33 (60%), Positives = 30/33 (90%)
 Frame = +3

Query: 354 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGI 452
           +YISP F+DK+ +HI KNF+++P+I+VPLI+GI
Sbjct: 3   YYISPRFIDKLAVHITKNFLEIPRIRVPLIIGI 35

[97][TOP]
>UniRef100_B4WNZ5 Ribulose bisphosphate carboxylase, small subunit, putative n=1
           Tax=Synechococcus sp. PCC 7335 RepID=B4WNZ5_9SYNE
          Length = 455

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 21/33 (63%), Positives = 30/33 (90%)
 Frame = +3

Query: 354 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGI 452
           +YI+P FL+K+ +HI KN++DLP++KVPLILGI
Sbjct: 3   YYIAPRFLNKLAVHITKNYLDLPQVKVPLILGI 35

[98][TOP]
>UniRef100_B9GLS2 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9GLS2_POPTR
          Length = 428

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
 Frame = +3

Query: 237 MVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFNNIEDGFYISPAFLDKMTIHIAKNFM- 413
           +VD LF G F  G   + V    +Y  +   SF  ++  +YI+P FLDK+  HI KN++ 
Sbjct: 97  VVDSLFAGNF-LGKDSDIVF---DYRQKVTRSFEYLQGDYYIAPLFLDKVVCHIVKNYLA 152

Query: 414 DLPKIKVPLILGIW 455
               +KVPLILGIW
Sbjct: 153 HRLNVKVPLILGIW 166

[99][TOP]
>UniRef100_B2J8T8 Ribulose bisphosphate carboxylase, small chain n=1 Tax=Nostoc
           punctiforme PCC 73102 RepID=B2J8T8_NOSP7
          Length = 425

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 21/34 (61%), Positives = 29/34 (85%)
 Frame = +3

Query: 351 GFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGI 452
           G+YI+P FLDK+ +HI KNF+ LP ++VP+ILGI
Sbjct: 2   GYYIAPRFLDKLAVHITKNFLKLPGVRVPVILGI 35

[100][TOP]
>UniRef100_Q06721 Ribulose bisphosphate carboxylase/oxygenase activase n=1
           Tax=Anabaena sp. CA RepID=RCA_ANASC
          Length = 415

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 21/33 (63%), Positives = 29/33 (87%)
 Frame = +3

Query: 354 FYISPAFLDKMTIHIAKNFMDLPKIKVPLILGI 452
           +YI+P FLDK+ +HI KNF++LP ++VPLILGI
Sbjct: 3   YYIAPRFLDKLAVHITKNFLNLPGVRVPLILGI 35