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[1][TOP] >UniRef100_P08475 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Chlamydomonas reinhardtii RepID=RBS2_CHLRE Length = 185 Score = 310 bits (793), Expect = 4e-83 Identities = 152/152 (100%), Positives = 152/152 (100%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 184 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF Sbjct: 1 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 60 Query: 185 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 364 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM Sbjct: 61 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 120 Query: 365 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL Sbjct: 121 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 152 [2][TOP] >UniRef100_P00873 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=2 Tax=Chlamydomonas reinhardtii RepID=RBS1_CHLRE Length = 185 Score = 307 bits (787), Expect = 2e-82 Identities = 150/152 (98%), Positives = 152/152 (100%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 184 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF Sbjct: 1 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 60 Query: 185 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 364 SYLPPL+DEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNESAIRFGSVSCLYYDNRYWTM Sbjct: 61 SYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTM 120 Query: 365 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL Sbjct: 121 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 152 [3][TOP] >UniRef100_Q84U90 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox carteri RepID=Q84U90_VOLCA Length = 185 Score = 295 bits (756), Expect = 8e-79 Identities = 140/152 (92%), Positives = 148/152 (97%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 184 MAA++AKSSV+A VARPARSSVRP+A LKPAVKAAPVAAPAQAN+MMVWTPVNNKMFETF Sbjct: 1 MAAIVAKSSVAAVVARPARSSVRPVAGLKPAVKAAPVAAPAQANKMMVWTPVNNKMFETF 60 Query: 185 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 364 SYLPPL+DEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNES +RFG VSCLYYDNRYWTM Sbjct: 61 SYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRFGPVSCLYYDNRYWTM 120 Query: 365 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL Sbjct: 121 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 152 [4][TOP] >UniRef100_Q84U92 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox carteri RepID=Q84U92_VOLCA Length = 185 Score = 292 bits (748), Expect = 7e-78 Identities = 137/152 (90%), Positives = 147/152 (96%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 184 MAA++AKSSV+ AV RPARSSVRP+A LKPA+KAAPVA+PAQAN+MMVWTPVNNKMFETF Sbjct: 1 MAAIVAKSSVATAVVRPARSSVRPVAVLKPAIKAAPVASPAQANKMMVWTPVNNKMFETF 60 Query: 185 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 364 SYLPPL+DEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNES +RFG VSCLYYDNRYWTM Sbjct: 61 SYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRFGPVSCLYYDNRYWTM 120 Query: 365 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL Sbjct: 121 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 152 [5][TOP] >UniRef100_Q84U91 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox carteri RepID=Q84U91_VOLCA Length = 185 Score = 289 bits (739), Expect = 8e-77 Identities = 137/152 (90%), Positives = 144/152 (94%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 184 MAAVIAKSSV+ AVARPARS VRP+A LKP+V+A PVA P QAN+MMVWTPVNNKMFETF Sbjct: 1 MAAVIAKSSVATAVARPARSGVRPVAVLKPSVRATPVATPTQANKMMVWTPVNNKMFETF 60 Query: 185 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 364 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNES +RFG VSCLYYDNRYWTM Sbjct: 61 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRFGPVSCLYYDNRYWTM 120 Query: 365 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL Sbjct: 121 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 152 [6][TOP] >UniRef100_A8JGP8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas reinhardtii RepID=A8JGP8_CHLRE Length = 188 Score = 217 bits (553), Expect(2) = 2e-74 Identities = 110/110 (100%), Positives = 110/110 (100%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 184 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF Sbjct: 1 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 60 Query: 185 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 334 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC Sbjct: 61 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 110 Score = 85.9 bits (211), Expect(2) = 2e-74 Identities = 39/39 (100%), Positives = 39/39 (100%) Frame = +1 Query: 343 RQPLLDHVEAAHVRLPRPHAGAARDRRLHQGLPRCLRAP 459 RQPLLDHVEAAHVRLPRPHAGAARDRRLHQGLPRCLRAP Sbjct: 111 RQPLLDHVEAAHVRLPRPHAGAARDRRLHQGLPRCLRAP 149 [7][TOP] >UniRef100_A8JGP5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas reinhardtii RepID=A8JGP5_CHLRE Length = 139 Score = 228 bits (581), Expect = 2e-58 Identities = 106/106 (100%), Positives = 106/106 (100%) Frame = +2 Query: 143 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 322 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG Sbjct: 1 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 60 Query: 323 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL Sbjct: 61 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 106 [8][TOP] >UniRef100_Q5VBK1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Dunaliella tertiolecta RepID=Q5VBK1_DUNTE Length = 189 Score = 219 bits (559), Expect = 6e-56 Identities = 103/153 (67%), Positives = 128/153 (83%), Gaps = 1/153 (0%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPA-QANQMMVWTPVNNKMFET 181 MAA++AKS+ A +A+ +R++ + A+LKPAV+AAP A PA +ANQMMVW P+NNK FET Sbjct: 1 MAALLAKSASVAPMAKASRTATKVQASLKPAVRAAPKAQPAVRANQMMVWNPINNKQFET 60 Query: 182 FSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWT 361 FSYLPPL+ +QIA QVDYIV NGW PCLEFAE ++AYVS++SA+RFG+VS YYDNRYWT Sbjct: 61 FSYLPPLTADQIAKQVDYIVNNGWTPCLEFAEQNQAYVSSDSAVRFGAVSANYYDNRYWT 120 Query: 362 MWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 MWKLPMFGC DP QVL EI C++AFP++Y RL Sbjct: 121 MWKLPMFGCTDPSQVLSEINKCSRAFPESYQRL 153 [9][TOP] >UniRef100_Q5VBK0 Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit n=1 Tax=Dunaliella tertiolecta RepID=Q5VBK0_DUNTE Length = 188 Score = 211 bits (536), Expect = 3e-53 Identities = 105/154 (68%), Positives = 126/154 (81%), Gaps = 2/154 (1%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVA-APA-QANQMMVWTPVNNKMFE 178 MA++IAKS+ A VA +R+S + A+LKPAV+A P A APA +ANQMMVW P+NNK FE Sbjct: 1 MASLIAKSASVAPVA--SRTSTKVQASLKPAVRAVPKAQAPAVRANQMMVWQPINNKQFE 58 Query: 179 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 358 TFSYLPPL+ +QIA QVDYIV NGW PCLEFAE +AYVS++SA+RFG+VS YYDNRYW Sbjct: 59 TFSYLPPLTADQIARQVDYIVENGWTPCLEFAEEGQAYVSSDSAVRFGAVSANYYDNRYW 118 Query: 359 TMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 TMWKLPMFGC DP QVL EI C++AFP++Y RL Sbjct: 119 TMWKLPMFGCTDPSQVLSEINKCSRAFPNSYQRL 152 [10][TOP] >UniRef100_Q5XR40 Ribulose bisphosphate carboxylase small chain n=1 Tax=Dunaliella salina RepID=Q5XR40_DUNSA Length = 190 Score = 198 bits (504), Expect = 1e-49 Identities = 105/156 (67%), Positives = 120/156 (76%), Gaps = 4/156 (2%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARP-ARSSVRPMAALKPAV-KAAPVA-APA-QANQMMVWTPVNNKM 172 MAA+IAK+ AVA P +R S + A+LKPAV + AP A APA + NQMMVW PVNNK Sbjct: 1 MAALIAKTC--PAVATPISRGSTKVQASLKPAVTRPAPKAQAPAVRTNQMMVWRPVNNKQ 58 Query: 173 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 352 FETFSYLPPL+ +QIA QVDYIV NGWIPCLEF+E AYV+N + RFG VS YYDNR Sbjct: 59 FETFSYLPPLTADQIARQVDYIVGNGWIPCLEFSEESYAYVANTNTARFGPVSNNYYDNR 118 Query: 353 YWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YWTMWKLPMFGC DP QVL EI C++AFP+AY RL Sbjct: 119 YWTMWKLPMFGCTDPAQVLMEIQKCSRAFPEAYQRL 154 [11][TOP] >UniRef100_C7FF11 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlorella pyrenoidosa RepID=C7FF11_CHLPY Length = 184 Score = 194 bits (494), Expect = 2e-48 Identities = 96/152 (63%), Positives = 111/152 (73%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 184 MA+ I+ S V A VA RS ++P AV + + + MMVWTPVNNK FETF Sbjct: 1 MASTISASLVKAPVATTQRSVLKPAGKTFKAVTVSN-GNVQKTSAMMVWTPVNNKFFETF 59 Query: 185 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 364 SYLPPLS +QIA QVDYIV NGW PCLEFA+ D AYVSN+S +RFG+VS Y DNRYWTM Sbjct: 60 SYLPPLSGDQIARQVDYIVLNGWTPCLEFADPDCAYVSNDSCVRFGNVSVGYQDNRYWTM 119 Query: 365 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 WKLPMFGC DP QVL+EI C +AFPDAY+RL Sbjct: 120 WKLPMFGCTDPSQVLKEISNCERAFPDAYIRL 151 [12][TOP] >UniRef100_P16133 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS5_ACECL Length = 184 Score = 187 bits (476), Expect = 2e-46 Identities = 93/152 (61%), Positives = 108/152 (71%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 184 MAA + ++ + ARSS P A A+ VA ++ +MMVW P NNKMFETF Sbjct: 1 MAAAMMNKTIVVSKDGCARSSSIPKVATNKMGFASAVAMK-KSREMMVWQPFNNKMFETF 59 Query: 185 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 364 SYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTM Sbjct: 60 SYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTM 119 Query: 365 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 WKLPMFGC D QVL EI ACTKAFPDAY+RL Sbjct: 120 WKLPMFGCTDGSQVLSEIQACTKAFPDAYIRL 151 [13][TOP] >UniRef100_C7FF10 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlorella pyrenoidosa RepID=C7FF10_CHLPY Length = 181 Score = 186 bits (471), Expect = 9e-46 Identities = 86/148 (58%), Positives = 106/148 (71%), Gaps = 5/148 (3%) Frame = +2 Query: 32 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQAN-----QMMVWTPVNNKMFETFSYLP 196 ++ +A A +VRP+A LK A + + + M VWTP+NNKMFETFSYLP Sbjct: 1 MACTMAAIAPVAVRPVAGLKQAKNTSAARTVSNGSIQKTTAMQVWTPINNKMFETFSYLP 60 Query: 197 PLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLP 376 PL+D +I+ QVDYIV NGW PCLEFAES AY SNE+ IR + +CLYYDNRYWTMWKLP Sbjct: 61 PLTDAEISRQVDYIVNNGWTPCLEFAESASAYASNENCIRMNNTTCLYYDNRYWTMWKLP 120 Query: 377 MFGCRDPMQVLREIVACTKAFPDAYVRL 460 MFGC D QVL+E+ C +AFPDAY+R+ Sbjct: 121 MFGCTDGHQVLQEVANCRRAFPDAYIRM 148 [14][TOP] >UniRef100_P16131 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS3_ACECL Length = 183 Score = 182 bits (463), Expect = 8e-45 Identities = 84/115 (73%), Positives = 91/115 (79%) Frame = +2 Query: 116 AAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYV 295 AA + MMVW P NNKMFETFSYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY Sbjct: 36 AAVQKCRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYA 95 Query: 296 SNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 NE+ IR G VS Y DNRYWTMWKLPMFGC D QVL EI ACTKAFPDAY+RL Sbjct: 96 GNENCIRMGPVSSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRL 150 [15][TOP] >UniRef100_P16132 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS4_ACECL Length = 182 Score = 181 bits (458), Expect = 3e-44 Identities = 86/137 (62%), Positives = 100/137 (72%), Gaps = 2/137 (1%) Frame = +2 Query: 56 ARSSVRPMAALKPAV--KAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQV 229 ++ +P A K ++ K A + +MMVW P NNKMFETFSYLPPL+DEQI+ QV Sbjct: 13 SKGCTKPSAVPKVSINRKGFLNTAMNKKREMMVWQPFNNKMFETFSYLPPLTDEQISKQV 72 Query: 230 DYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVL 409 DYI+AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTMWKLPMFGC D QVL Sbjct: 73 DYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVL 132 Query: 410 REIVACTKAFPDAYVRL 460 EI ACTKAFPDAY+RL Sbjct: 133 SEIQACTKAFPDAYIRL 149 [16][TOP] >UniRef100_Q38692 Ribulose bisphosphate carboxylase small chain 6, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS6_ACECL Length = 182 Score = 180 bits (456), Expect = 5e-44 Identities = 88/153 (57%), Positives = 109/153 (71%), Gaps = 2/153 (1%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPV--AAPAQANQMMVWTPVNNKMFET 181 A +++K+ +S+ + +P+A K ++ V +A + +MMVW P NNKMFET Sbjct: 3 ATMMSKTIISS------KQCSKPIAPPKVSINKGFVNTSAAIKNREMMVWQPFNNKMFET 56 Query: 182 FSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWT 361 FSYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY NE+ I G V+ Y DNRYWT Sbjct: 57 FSYLPPLTDEQISKQVDYILANAWTPCLEFAASDQAYAGNENCITMGPVASTYQDNRYWT 116 Query: 362 MWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 MWKLPMFGC D QVL EI ACTKAFPDAY+RL Sbjct: 117 MWKLPMFGCTDGSQVLTEIQACTKAFPDAYIRL 149 [17][TOP] >UniRef100_P16136 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Acetabularia acetabulum RepID=RBS3_ACEAT Length = 182 Score = 179 bits (453), Expect = 1e-43 Identities = 91/154 (59%), Positives = 105/154 (68%), Gaps = 2/154 (1%) Frame = +2 Query: 5 MAAVIAKSSV--SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFE 178 MA+++ SV S A+P S P L A +A + MMVW P NNKMFE Sbjct: 1 MASIMMNKSVVLSKECAKPLAS---PKVTLNKRGFATTIATKNRG--MMVWQPFNNKMFE 55 Query: 179 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 358 TFS+LPPL+DEQI+ QVDYI+ N W PCLEFA SD+AY NE+ IR G V+ Y DNRYW Sbjct: 56 TFSFLPPLTDEQISKQVDYILINSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYW 115 Query: 359 TMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 TMWKLPMFGC D QVL EI ACTKAFPDAY+RL Sbjct: 116 TMWKLPMFGCTDASQVLSEIQACTKAFPDAYIRL 149 [18][TOP] >UniRef100_P16134 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=2 Tax=Acetabularia acetabulum RepID=RBS1_ACEAT Length = 182 Score = 179 bits (453), Expect = 1e-43 Identities = 90/154 (58%), Positives = 106/154 (68%), Gaps = 2/154 (1%) Frame = +2 Query: 5 MAAVIAKSSV--SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFE 178 MA+++ SV S A+P + P L A +A + +MMVW P NNKMFE Sbjct: 1 MASIMMNKSVVLSKECAKPLAT---PKVTLNKRGFATTIAT--KNREMMVWQPFNNKMFE 55 Query: 179 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 358 TFS+LPPL+DEQI+ QVDYI+ N W PCLEFA SD+AY NE+ IR G V+ Y DNRYW Sbjct: 56 TFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYW 115 Query: 359 TMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 TMWKLPMFGC D QVL EI ACTKAFPDAY+RL Sbjct: 116 TMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRL 149 [19][TOP] >UniRef100_P16138 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Acetabularia acetabulum RepID=RBS5_ACEAT Length = 183 Score = 177 bits (449), Expect = 3e-43 Identities = 84/133 (63%), Positives = 96/133 (72%), Gaps = 3/133 (2%) Frame = +2 Query: 71 RPMAALKPAVKAAPVAAPAQANQ---MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIV 241 +P A K + A + N+ MMVW P NNKMFETFS+LPPL+DEQI+ QVDYI+ Sbjct: 18 KPAAVPKVVMSKGGFARTSAVNKNRDMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYIL 77 Query: 242 ANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIV 421 AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTMWKLPMFGC D QVL EI Sbjct: 78 ANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQ 137 Query: 422 ACTKAFPDAYVRL 460 ACT AFPDAY+RL Sbjct: 138 ACTNAFPDAYIRL 150 [20][TOP] >UniRef100_Q30CC3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Haematococcus pluvialis RepID=Q30CC3_HAEPL Length = 141 Score = 177 bits (448), Expect = 4e-43 Identities = 76/107 (71%), Positives = 89/107 (83%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 MMVW P+NNK +ETFSYLPPL+ +QIA QVDY+V NGWIPCLEFA++ +AYVSN S +RF Sbjct: 1 MMVWQPINNKQYETFSYLPPLTSDQIARQVDYVVGNGWIPCLEFADASQAYVSNASTVRF 60 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 GSVS YYDNRYWT+WKLPMFGC DP VL EI +KAFP AY+R+ Sbjct: 61 GSVSACYYDNRYWTLWKLPMFGCTDPSAVLTEISRASKAFPQAYIRM 107 [21][TOP] >UniRef100_Q38693 Ribulose bisphosphate carboxylase small chain 7, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS7_ACECL Length = 183 Score = 177 bits (448), Expect = 4e-43 Identities = 79/107 (73%), Positives = 88/107 (82%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 MMVW P NNKMFETFSYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY NE+ IR Sbjct: 44 MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRM 103 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G V+ Y DNRYWTMWKLPMFGC D QVL ++ ACTKAFPDAY+RL Sbjct: 104 GPVASTYQDNRYWTMWKLPMFGCTDGSQVLSDMQACTKAFPDAYIRL 150 [22][TOP] >UniRef100_P16137 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Acetabularia acetabulum RepID=RBS4_ACEAT Length = 182 Score = 177 bits (448), Expect = 4e-43 Identities = 91/152 (59%), Positives = 106/152 (69%), Gaps = 1/152 (0%) Frame = +2 Query: 8 AAVIAKSSV-SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 184 AA++ KS V S +PA + P A+ VA + +MMVW P NNKMFETF Sbjct: 3 AAMMNKSVVLSKQCTKPAAT---PKVVTSKRSFASTVAN--KNREMMVWQPFNNKMFETF 57 Query: 185 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 364 S+LPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTM Sbjct: 58 SFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTM 117 Query: 365 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 WKLPMFGC D QVL EI ACT AFPDAY+RL Sbjct: 118 WKLPMFGCTDGSQVLSEIQACTNAFPDAYIRL 149 [23][TOP] >UniRef100_P17537 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Chlamydomonas moewusii RepID=RBS_CHLMO Length = 168 Score = 176 bits (446), Expect = 7e-43 Identities = 85/139 (61%), Positives = 103/139 (74%) Frame = +2 Query: 44 VARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAA 223 +A A SV AA + +AAPVAAPA A + VW PVNNK +ETFSYLPPL++++I Sbjct: 1 MASIAAKSVSLRAATR---RAAPVAAPADA-RFKVWQPVNNKQYETFSYLPPLTNQKIGR 56 Query: 224 QVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQ 403 QVDYI+ NGW PCLEFA+ ++VSN +A+R VS YYDNRYWTMWKLPMFGC DP Q Sbjct: 57 QVDYIINNGWTPCLEFADPSTSFVSNANAVRLQGVSAGYYDNRYWTMWKLPMFGCTDPSQ 116 Query: 404 VLREIVACTKAFPDAYVRL 460 VLRE+ AC AFP+ Y+RL Sbjct: 117 VLREVSACQVAFPNVYIRL 135 [24][TOP] >UniRef100_C4P6Y2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ankistrodesmus convolutus RepID=C4P6Y2_9CHLO Length = 165 Score = 175 bits (444), Expect = 1e-42 Identities = 84/133 (63%), Positives = 98/133 (73%), Gaps = 1/133 (0%) Frame = +2 Query: 65 SVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVA 244 ++R A + A KA A PA+ MVW PVNNK FETFSYLPPL+DEQIA QVDYIV Sbjct: 2 ALRLTAGSRVAAKAPVAAKPAK---FMVWQPVNNKFFETFSYLPPLNDEQIARQVDYIVN 58 Query: 245 NGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIV 421 NGW PCLEF++S AY+SN + +R + YYDNRYWT+WKLPMFGC DP QVL+EI Sbjct: 59 NGWTPCLEFSDSQTAYMSNTNVVRIQNGATANYYDNRYWTLWKLPMFGCTDPSQVLKEIA 118 Query: 422 ACTKAFPDAYVRL 460 AC KA PDAYVR+ Sbjct: 119 ACVKACPDAYVRM 131 [25][TOP] >UniRef100_Q9XFT5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas sp. HS-5 RepID=Q9XFT5_9CHLO Length = 158 Score = 175 bits (443), Expect = 2e-42 Identities = 79/120 (65%), Positives = 96/120 (80%) Frame = +2 Query: 101 KAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAES 280 KA PVAAP +A+ VW PVNNK +ETFSYLP L+ EQIA QVDY++ NG+ PCLEFA++ Sbjct: 13 KATPVAAP-RASAFKVWQPVNNKQYETFSYLPALTSEQIARQVDYVIRNGYTPCLEFADA 71 Query: 281 DKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 ++VSNE+ +RF VS YYDNRYWTMWKLPMFGC D QVL+E+ CT+AFP+AYVRL Sbjct: 72 AYSFVSNENTVRFSGVSANYYDNRYWTMWKLPMFGCTDAAQVLKEVALCTRAFPNAYVRL 131 [26][TOP] >UniRef100_P26985 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Batophora oerstedii RepID=RBS_BATOE Length = 175 Score = 170 bits (431), Expect = 4e-41 Identities = 75/112 (66%), Positives = 89/112 (79%) Frame = +2 Query: 125 AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNE 304 +++ MMVW P NNK FETFSYLPPL+D+QI QVDYI+ N W PCLEFA SD+AYV+++ Sbjct: 31 SKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFAGSDQAYVTHD 90 Query: 305 SAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 + +R G + Y DNRYWTMWKLPMFGC D QVL EI ACTKAFPDAY+RL Sbjct: 91 NTVRMGDCASTYQDNRYWTMWKLPMFGCIDGSQVLTEISACTKAFPDAYIRL 142 [27][TOP] >UniRef100_B3VSA1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Parietochloris incisa RepID=B3VSA1_9CHLO Length = 189 Score = 170 bits (430), Expect = 5e-41 Identities = 89/158 (56%), Positives = 114/158 (72%), Gaps = 6/158 (3%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQAN-----QMMVWTPVNN 166 MAA A S +SA VA A ++ R + AL PA +AA A +N QMMVW P NN Sbjct: 1 MAAACA-SLLSAPVAVVASAAPARSLKALAPA-RAATFAQKTVSNGIKTRQMMVWQPTNN 58 Query: 167 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 346 + FET S+LPPL+D+QIA QVDY++ NGW+PCLEF+E++ AYV++++ IR+G+V+ Y D Sbjct: 59 RYFETLSFLPPLTDDQIAKQVDYMINNGWVPCLEFSEANMAYVASDNCIRYGNVASGYQD 118 Query: 347 NRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 NRYWTM+KLPMFGC DP QVL EI K FPDAY+RL Sbjct: 119 NRYWTMFKLPMFGCTDPGQVLTEIANAEKCFPDAYIRL 156 [28][TOP] >UniRef100_Q68BK9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris bacillaris RepID=Q68BK9_NANBA Length = 182 Score = 165 bits (417), Expect = 2e-39 Identities = 79/152 (51%), Positives = 99/152 (65%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 184 MA+ IA S+ + VA + + A V V + M+VWTP+NNK FETF Sbjct: 1 MASTIAFSTAAVRVAPITKVNATSTKARTAFVSNGTVK---KTTAMLVWTPINNKFFETF 57 Query: 185 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 364 S+LPPLSD +I QVDYIV NGW PCLEF++ + AY+ + + +R S Y DNRYW+M Sbjct: 58 SFLPPLSDSEITKQVDYIVRNGWTPCLEFSDPEGAYIGDTNTVRLQGTSAGYQDNRYWSM 117 Query: 365 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 WKLPMFGC D QVL+EI CTKAFP AY+RL Sbjct: 118 WKLPMFGCTDGSQVLKEIAGCTKAFPGAYIRL 149 [29][TOP] >UniRef100_Q68BL0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris bacillaris RepID=Q68BL0_NANBA Length = 182 Score = 164 bits (416), Expect = 2e-39 Identities = 78/152 (51%), Positives = 99/152 (65%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 184 MA+ IA S+ + +A + + A V V + M+VWTP+NNK FETF Sbjct: 1 MASTIAISTAAVRIAPITKVNAASTKARTAFVSNGTVK---KTTAMLVWTPINNKFFETF 57 Query: 185 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 364 S+LPPLSD +I QVDYIV NGW PCLEF++ + AY+ + + +R S Y DNRYW+M Sbjct: 58 SFLPPLSDSEITKQVDYIVRNGWTPCLEFSDPEGAYIGDTNTVRLQGTSAGYQDNRYWSM 117 Query: 365 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 WKLPMFGC D QVL+EI CTKAFP AY+RL Sbjct: 118 WKLPMFGCTDGSQVLKEIAGCTKAFPGAYIRL 149 [30][TOP] >UniRef100_Q9ZRA1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Chloromonas sp. ANT3 RepID=Q9ZRA1_9CHLO Length = 140 Score = 162 bits (409), Expect = 1e-38 Identities = 70/105 (66%), Positives = 82/105 (78%) Frame = +2 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW PVNNK +ETFSYLP L+ EQIA QVDY++ NGW PCLEFA+ ++VSNE+ +RF Sbjct: 3 VWQPVNNKQYETFSYLPALTTEQIAKQVDYVIRNGWTPCLEFADPSSSFVSNENTVRFRG 62 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 S YYDNRYWTMWKLPMFGC D QVL+EI AC AFP++Y RL Sbjct: 63 ASSNYYDNRYWTMWKLPMFGCTDASQVLKEIAACNAAFPESYSRL 107 [31][TOP] >UniRef100_Q9STC5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Euglena gracilis RepID=Q9STC5_EUGGR Length = 271 Score = 162 bits (409), Expect = 1e-38 Identities = 76/128 (59%), Positives = 89/128 (69%) Frame = +2 Query: 77 MAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWI 256 MA +KP K A V M VW PVNNK FETFSYLPPLSD QIA QVD I+A G Sbjct: 116 MAMMKP--KVAAVLPFTSEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLS 173 Query: 257 PCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKA 436 PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC D QVLREI C +A Sbjct: 174 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRA 233 Query: 437 FPDAYVRL 460 +P YVRL Sbjct: 234 YPQCYVRL 241 [32][TOP] >UniRef100_P16881 Ribulose bisphosphate carboxylase small chain P8, chloroplastic n=1 Tax=Euglena gracilis RepID=RBS_EUGGR Length = 1273 Score = 162 bits (409), Expect = 1e-38 Identities = 76/128 (59%), Positives = 89/128 (69%) Frame = +2 Query: 77 MAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWI 256 MA +KP K A V M VW PVNNK FETFSYLPPLSD QIA QVD I+A G Sbjct: 116 MAMMKP--KVAAVLPFTSEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLS 173 Query: 257 PCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKA 436 PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC D QVLREI C +A Sbjct: 174 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRA 233 Query: 437 FPDAYVRL 460 +P YVRL Sbjct: 234 YPQCYVRL 241 Score = 159 bits (403), Expect = 7e-38 Identities = 77/143 (53%), Positives = 95/143 (66%) Frame = +2 Query: 32 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 211 +S V RP+ SS + + +AA +M VW PVNNK FETFSYLPPLSD Sbjct: 827 ISFVVQRPSGSS---------SSSSWGMAAMTGEKEMKVWNPVNNKKFETFSYLPPLSDA 877 Query: 212 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 391 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 878 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 937 Query: 392 DPMQVLREIVACTKAFPDAYVRL 460 D QVLREI C +A+P YVRL Sbjct: 938 DASQVLREISECRRAYPQCYVRL 960 Score = 159 bits (402), Expect = 9e-38 Identities = 77/143 (53%), Positives = 93/143 (65%) Frame = +2 Query: 32 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 211 +S V RP+ SS +AA +M VW PVNNK FETFSYLPPLSD Sbjct: 1115 ISFVVQRPSGSSSSSWG----------MAAMTGEKEMKVWNPVNNKKFETFSYLPPLSDA 1164 Query: 212 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 391 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 1165 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 1224 Query: 392 DPMQVLREIVACTKAFPDAYVRL 460 D QVLREI C +A+P YVRL Sbjct: 1225 DASQVLREISECRRAYPQCYVRL 1247 Score = 158 bits (400), Expect = 2e-37 Identities = 77/143 (53%), Positives = 92/143 (64%) Frame = +2 Query: 32 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 211 +S V RP+ SS +AA M VW PVNNK FETFSYLPPLSD Sbjct: 253 ISFVVQRPSGSSSSSWG----------MAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 302 Query: 212 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 391 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 303 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 362 Query: 392 DPMQVLREIVACTKAFPDAYVRL 460 D QVLREI C +A+P YVRL Sbjct: 363 DASQVLREISECRRAYPQCYVRL 385 Score = 158 bits (400), Expect = 2e-37 Identities = 77/143 (53%), Positives = 92/143 (64%) Frame = +2 Query: 32 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 211 +S V RP+ SS +AA M VW PVNNK FETFSYLPPLSD Sbjct: 540 ISFVVQRPSGSSSSSWG----------MAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 589 Query: 212 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 391 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 590 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 649 Query: 392 DPMQVLREIVACTKAFPDAYVRL 460 D QVLREI C +A+P YVRL Sbjct: 650 DASQVLREISECRRAYPQCYVRL 672 Score = 158 bits (400), Expect = 2e-37 Identities = 77/143 (53%), Positives = 93/143 (65%) Frame = +2 Query: 32 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 211 +S V RP+ SS + +AA M VW PVNNK FETFSYLPPLSD Sbjct: 684 ISFVVQRPSGSS-----------SSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 732 Query: 212 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 391 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 733 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 792 Query: 392 DPMQVLREIVACTKAFPDAYVRL 460 D QVLREI C +A+P YVRL Sbjct: 793 DASQVLREISECRRAYPQCYVRL 815 Score = 158 bits (400), Expect = 2e-37 Identities = 77/143 (53%), Positives = 92/143 (64%) Frame = +2 Query: 32 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 211 +S V RP+ SS +AA M VW PVNNK FETFSYLPPLSD Sbjct: 971 ISFVVQRPSGSSSSSWG----------MAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 1020 Query: 212 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 391 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 1021 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 1080 Query: 392 DPMQVLREIVACTKAFPDAYVRL 460 D QVLREI C +A+P YVRL Sbjct: 1081 DASQVLREISECRRAYPQCYVRL 1103 Score = 156 bits (395), Expect = 6e-37 Identities = 76/143 (53%), Positives = 92/143 (64%) Frame = +2 Query: 32 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 211 +S V RP+ SS + +AA M VW PVNNK FETFSYLPPLSD Sbjct: 397 ISFVVQRPSGSS-----------SSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 445 Query: 212 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 391 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDN YWTMWKLPMFGC Sbjct: 446 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNHYWTMWKLPMFGCT 505 Query: 392 DPMQVLREIVACTKAFPDAYVRL 460 D QVLREI C +A+P YVRL Sbjct: 506 DASQVLREISECRRAYPQCYVRL 528 [33][TOP] >UniRef100_Q68BK3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris bacillaris RepID=Q68BK3_NANBA Length = 180 Score = 161 bits (408), Expect = 2e-38 Identities = 82/152 (53%), Positives = 101/152 (66%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 184 MA+ +A + A+ RP + V+ A K V A + + MVWTPVNNK FETF Sbjct: 1 MASALA---FTPALVRP--TGVKTTVASKKNVFAVSNSTIKNTSAFMVWTPVNNKFFETF 55 Query: 185 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 364 S+LPPLS+ +I+ QVDY+V N + PCLEF+E + AYV + S IR S Y DNRYW M Sbjct: 56 SFLPPLSESEISKQVDYMVRNAFTPCLEFSEPENAYVGDASTIRLCGTSSGYQDNRYWPM 115 Query: 365 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 WKLPMFGC D QVL+EI ACTKAFP AY+RL Sbjct: 116 WKLPMFGCTDGSQVLKEIAACTKAFPGAYIRL 147 [34][TOP] >UniRef100_P16129 Ribulose bisphosphate carboxylase small chain 1 (Fragment) n=1 Tax=Acetabularia peniculus RepID=RBS1_ACECL Length = 126 Score = 152 bits (383), Expect = 1e-35 Identities = 68/93 (73%), Positives = 76/93 (81%) Frame = +2 Query: 182 FSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWT 361 FSYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY N++ IR G V+ Y DNRYWT Sbjct: 1 FSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNDNCIRMGPVASTYQDNRYWT 60 Query: 362 MWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 MWKLPMFGC D QVL EI ACTKAFPDAY+RL Sbjct: 61 MWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRL 93 [35][TOP] >UniRef100_C1E329 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas sp. RCC299 RepID=C1E329_9CHLO Length = 191 Score = 151 bits (382), Expect = 2e-35 Identities = 69/132 (52%), Positives = 91/132 (68%), Gaps = 4/132 (3%) Frame = +2 Query: 77 MAALKPAVKAAPVAAPAQA---NQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVAN 247 ++A+ P + APV + +A N MMVW P NK FETFS+LPPLSD+++A QV Y++ N Sbjct: 4 ISAVAPVLNKAPVVSTGKAANTNSMMVWQPHGNKFFETFSFLPPLSDQEVARQVQYLLNN 63 Query: 248 GWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVA 424 GW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC +P +VL+EI A Sbjct: 64 GWTPCIEFESAAKAYADTHGWSGLDSSVTAGYYDNRYWVMWKLPMYGCTNPEEVLQEIRA 123 Query: 425 CTKAFPDAYVRL 460 CT AFPD ++R+ Sbjct: 124 CTSAFPDCFIRV 135 [36][TOP] >UniRef100_C1N9I5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N9I5_9CHLO Length = 186 Score = 150 bits (379), Expect = 4e-35 Identities = 70/136 (51%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Frame = +2 Query: 56 ARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDY 235 A SV P+ A PAV + +++ M VW P NNK FETFS+LPPLSD++IA QV Y Sbjct: 3 ALCSVAPVVAKVPAVSTGKAS---KSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQVQY 59 Query: 236 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLR 412 ++ NGW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC P +VL Sbjct: 60 LINNGWAPCIEFEGAGKAYCDTHGWSGLDSSVNAGYYDNRYWVMWKLPMYGCTSPDEVLA 119 Query: 413 EIVACTKAFPDAYVRL 460 E+ ACT+AFPD ++R+ Sbjct: 120 EVRACTRAFPDCFIRV 135 [37][TOP] >UniRef100_C1N9I4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N9I4_9CHLO Length = 183 Score = 150 bits (379), Expect = 4e-35 Identities = 70/136 (51%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Frame = +2 Query: 56 ARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDY 235 A SV P+ A PAV + +++ M VW P NNK FETFS+LPPLSD++IA QV Y Sbjct: 3 ALCSVAPVVAKVPAVSTGKAS---KSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQVQY 59 Query: 236 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLR 412 ++ NGW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC P +VL Sbjct: 60 LINNGWAPCIEFEGAGKAYCDTHGWSGLDSSVNAGYYDNRYWVMWKLPMYGCTSPDEVLA 119 Query: 413 EIVACTKAFPDAYVRL 460 E+ ACT+AFPD ++R+ Sbjct: 120 EVRACTRAFPDCFIRV 135 [38][TOP] >UniRef100_C1N9I3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N9I3_9CHLO Length = 204 Score = 150 bits (379), Expect = 4e-35 Identities = 70/136 (51%), Positives = 90/136 (66%), Gaps = 1/136 (0%) Frame = +2 Query: 56 ARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDY 235 A SV P+ A PAV + +++ M VW P NNK FETFS+LPPLSD++IA QV Y Sbjct: 3 ALCSVAPVVAKVPAVSTGKAS---KSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQVQY 59 Query: 236 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLR 412 ++ NGW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC P +VL Sbjct: 60 LINNGWAPCIEFEGAGKAYCDTHGWSGLDSSVNAGYYDNRYWVMWKLPMYGCTSPDEVLA 119 Query: 413 EIVACTKAFPDAYVRL 460 E+ ACT+AFPD ++R+ Sbjct: 120 EVRACTRAFPDCFIRV 135 [39][TOP] >UniRef100_C1E330 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas sp. RCC299 RepID=C1E330_9CHLO Length = 179 Score = 150 bits (378), Expect = 6e-35 Identities = 68/132 (51%), Positives = 92/132 (69%), Gaps = 4/132 (3%) Frame = +2 Query: 77 MAALKPAVKAAPVAAPAQA---NQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVAN 247 ++A+ P + APV + +A N MMVW P NK FETFS+LPPLSD+++A QV Y++ N Sbjct: 4 ISAVAPVLNKAPVVSTGKAANTNSMMVWQPHGNKFFETFSFLPPLSDQEVARQVQYLLNN 63 Query: 248 GWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVA 424 GW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC +P +VL+EI A Sbjct: 64 GWTPCIEFESAAKAYADTHGWSGLDSSVTAGYYDNRYWVMWKLPMYGCTNPDEVLQEIRA 123 Query: 425 CTKAFPDAYVRL 460 CT+AFP+ ++R+ Sbjct: 124 CTQAFPECFIRV 135 [40][TOP] >UniRef100_Q33BU5 RuBisCO small subunits (Fragment) n=1 Tax=Chlorella pyrenoidosa RepID=Q33BU5_CHLPY Length = 124 Score = 147 bits (370), Expect = 5e-34 Identities = 64/91 (70%), Positives = 73/91 (80%) Frame = +2 Query: 188 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 367 YLPPL+D +I+ QVDYIV NGW PCLEFAES AY SNE+ IR + +CLYYDNRYWTMW Sbjct: 1 YLPPLTDAEISRQVDYIVNNGWTPCLEFAESTSAYASNENCIRMNNTTCLYYDNRYWTMW 60 Query: 368 KLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 KLPMFGC D QVL E+ C +AFPDAY+RL Sbjct: 61 KLPMFGCTDGHQVLAEVSNCRRAFPDAYIRL 91 [41][TOP] >UniRef100_A7Y7F5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Chlorella pyrenoidosa RepID=A7Y7F5_CHLPY Length = 82 Score = 144 bits (363), Expect = 3e-33 Identities = 64/81 (79%), Positives = 69/81 (85%) Frame = +2 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW PVNNK FETFSYLPPLS +QIA QVDYIV NGW PCLEFA+ D AYVSN+S +RFG+ Sbjct: 1 VWKPVNNKFFETFSYLPPLSGDQIARQVDYIVLNGWTPCLEFADPDCAYVSNDSCVRFGN 60 Query: 326 VSCLYYDNRYWTMWKLPMFGC 388 VS Y DNRYWTMWKLPMFGC Sbjct: 61 VSVGYQDNRYWTMWKLPMFGC 81 [42][TOP] >UniRef100_A4SA22 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4SA22_OSTLU Length = 169 Score = 142 bits (359), Expect = 9e-33 Identities = 66/134 (49%), Positives = 85/134 (63%), Gaps = 1/134 (0%) Frame = +2 Query: 62 SSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIV 241 S++ +A A A A MM+W P NKMFETFS+LPPLSD +I+ QV Y++ Sbjct: 2 SAITQASAQVAKTVAVTTGKVANAKSMMIWRPHGNKMFETFSFLPPLSDAEISKQVQYLL 61 Query: 242 ANGWIPCLEFAESDKAYVSNES-AIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 418 NGW PC+EF +S AY A S++ YYDNRYW MWKLPM+GC++P +V+ EI Sbjct: 62 NNGWTPCIEFEDSAHAYTDGHGWANMDTSINAGYYDNRYWVMWKLPMYGCQNPDEVIAEI 121 Query: 419 VACTKAFPDAYVRL 460 C K FPD YVR+ Sbjct: 122 NTCIKCFPDCYVRV 135 [43][TOP] >UniRef100_Q7M229 Ribulose bisphosphate carboxylase small chain n=1 Tax=Euglena gracilis RepID=Q7M229_EUGGR Length = 138 Score = 142 bits (358), Expect = 1e-32 Identities = 67/114 (58%), Positives = 83/114 (72%), Gaps = 7/114 (6%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFA---ESDKA----YVS 298 M VW PVNNK +ETFSYLPPLSD +IA QVD I+A GWIPCLEF+ S++A Y++ Sbjct: 1 MKVWNPVNNKFWETFSYLPPLSDREIAKQVDMIIAKGWIPCLEFSLREISERAYPCCYIA 60 Query: 299 NESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 N++ +RF + YYDNRYWTMWKLPMFGC D QVL+E+ A P+ +VRL Sbjct: 61 NDNTVRFSCTAAGYYDNRYWTMWKLPMFGCTDASQVLKELSPLEFAAPENFVRL 114 [44][TOP] >UniRef100_Q8S322 Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (Fragment) n=1 Tax=Acetabularia acetabulum RepID=Q8S322_ACEAT Length = 126 Score = 139 bits (351), Expect = 7e-32 Identities = 62/92 (67%), Positives = 72/92 (78%) Frame = +2 Query: 182 FSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWT 361 +S+LPPL+DEQI+ QVDYI+AN W CLEFA SD+AY N++ IR V+ Y DNRYWT Sbjct: 1 YSFLPPLTDEQISKQVDYILANSWTACLEFAASDQAYAGNDNCIRMRPVASTYQDNRYWT 60 Query: 362 MWKLPMFGCRDPMQVLREIVACTKAFPDAYVR 457 MWKLPMFGC D QVL EI ACT AFPDAY+R Sbjct: 61 MWKLPMFGCTDGSQVLSEIQACTNAFPDAYIR 92 [45][TOP] >UniRef100_Q00SG4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus tauri RepID=Q00SG4_OSTTA Length = 168 Score = 137 bits (345), Expect = 4e-31 Identities = 59/113 (52%), Positives = 77/113 (68%), Gaps = 1/113 (0%) Frame = +2 Query: 125 AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNE 304 A A MM+W P NKMFETFS+LPPLSD +IA Q Y++ NGW PC+EF +++ AY Sbjct: 22 ANAKSMMIWRPHGNKMFETFSFLPPLSDAEIAKQCQYLLNNGWTPCIEFEDAEHAYADGH 81 Query: 305 SAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 S++ LYYDNRYW MWKLPM+GC++ +VL E+ K FPD Y+R+ Sbjct: 82 GWSNLDSSINSLYYDNRYWVMWKLPMYGCQNTDEVLAEVNMAKKCFPDCYIRV 134 [46][TOP] >UniRef100_B6RHQ3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Miscanthus x giganteus RepID=B6RHQ3_9POAL Length = 169 Score = 136 bits (343), Expect = 6e-31 Identities = 66/149 (44%), Positives = 88/149 (59%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ + A + +S+ A +P A V+ + M VW NK FET SYL Sbjct: 5 VMASSATAVAPFQGLKSTASLPVARRPTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPL++EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKL Sbjct: 65 PPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QV +E+ ++PDAYVR+ Sbjct: 118 PMFGCTDASQVYKELQEAIASYPDAYVRI 146 [47][TOP] >UniRef100_A9TKI7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TKI7_PHYPA Length = 181 Score = 136 bits (343), Expect = 6e-31 Identities = 77/168 (45%), Positives = 97/168 (57%), Gaps = 16/168 (9%) Frame = +2 Query: 5 MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------ 139 MA+V+A S+V S+AV+ +SV+ + LK + + A + Q Sbjct: 1 MASVVATSTVVAPAAFAASSSAVSTSESTSVKAFSGLKSSTLFSSKAQSLSSVQNGSRVQ 60 Query: 140 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 316 M VW P+ FETFSYLPPLSD+ IA QVDY++ IPCLEF +D +N S Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVDYMIQQKLIPCLEFDNADGVSRTNNS--- 117 Query: 317 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 S YYD RYWTMWKLPMFGC+DP QVLREI C K FP +VR+ Sbjct: 118 ----SPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECKKTFPGCFVRV 161 [48][TOP] >UniRef100_C5Y519 Ribulose bisphosphate carboxylase small chain n=1 Tax=Sorghum bicolor RepID=C5Y519_SORBI Length = 169 Score = 133 bits (335), Expect = 5e-30 Identities = 65/149 (43%), Positives = 87/149 (58%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ + A + +S+ A + A V+ + M VW NK FET SYL Sbjct: 5 VMASSATAVAPFQGLKSTATLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPL++EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKL Sbjct: 65 PPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QV +E+ ++PDAYVR+ Sbjct: 118 PMFGCTDASQVYKELQEAIASYPDAYVRI 146 [49][TOP] >UniRef100_A9T9D5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T9D5_PHYPA Length = 182 Score = 132 bits (333), Expect = 9e-30 Identities = 72/159 (45%), Positives = 95/159 (59%), Gaps = 7/159 (4%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKP----AVKAAPVAAPAQANQ---MMVWTPVN 163 M A A ++ S+A + +SV+ + LK A KA +++ ++ M VW P+ Sbjct: 10 MVAPAAFTAASSAASTSESASVKAFSGLKSNTLFASKAQSLSSVQNGSRVQCMQVWNPIG 69 Query: 164 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 343 FETFSYLPPLSD+ IA QV+Y++ G IPCLEF V+ + R + S YY Sbjct: 70 MTKFETFSYLPPLSDDSIAKQVEYMIQQGLIPCLEFD------VNADGVSRTNNSSPGYY 123 Query: 344 DNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 D RYWTMWKLPMFGC+D QVLREI C K FP +VR+ Sbjct: 124 DGRYWTMWKLPMFGCQDSSQVLREIEECKKTFPGCFVRI 162 [50][TOP] >UniRef100_A9SCN2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCN2_PHYPA Length = 182 Score = 132 bits (333), Expect = 9e-30 Identities = 75/168 (44%), Positives = 99/168 (58%), Gaps = 16/168 (9%) Frame = +2 Query: 5 MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAV----KAAPVAAPAQANQ-- 139 MA+V+A SSV S++V+ +SV+ + LK A KA +++ ++ Sbjct: 1 MASVVAASSVVAPATFVAASSSVSNSKSNSVKAFSGLKSATLFTSKAETLSSVQNGSRVQ 60 Query: 140 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 316 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V++ R Sbjct: 61 CMQVWNPIGQTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFD------VNSNGVSR 114 Query: 317 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 + S YYD RYWTMWKLPMFGC+D QVLREI C K FP +VR+ Sbjct: 115 ANNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRV 162 [51][TOP] >UniRef100_A9PI67 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa RepID=A9PI67_POPTR Length = 170 Score = 132 bits (333), Expect = 9e-30 Identities = 68/148 (45%), Positives = 86/148 (58%), Gaps = 7/148 (4%) Frame = +2 Query: 35 SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ-------MMVWTPVNNKMFETFSYL 193 ++AVA P +R + +P VA ++ M W P+NNK FE SYL Sbjct: 8 ASAVAAPGYHGLRALPTKQPFATKNSVARSSRTVSNGSKTFCMKTWNPINNKKFEALSYL 67 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS++ IA ++DY++ GWIPCLEF E V E + G YYD RYWT+WKL Sbjct: 68 PPLSEDSIAKEIDYMMKKGWIPCLEFDEVGS--VRREHSRMPG-----YYDGRYWTLWKL 120 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVR 457 PMFGC D QVL EI C KA+PDAY+R Sbjct: 121 PMFGCTDSSQVLEEIHECKKAYPDAYIR 148 [52][TOP] >UniRef100_Q9SXH1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Physcomitrella patens RepID=Q9SXH1_PHYPA Length = 214 Score = 132 bits (332), Expect = 1e-29 Identities = 72/160 (45%), Positives = 91/160 (56%), Gaps = 8/160 (5%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAV-------KAAPVAAPAQANQMMVWTPV 160 + A +A S+ V P+ SS V+ + LK A K + V ++ M VW P+ Sbjct: 39 VVAPVALGGASSCVGAPSESSSVKAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPI 98 Query: 161 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 340 FETFSYLPPL+D+QIA QVDY++ IPC+EF +N S G+ S Y Sbjct: 99 GQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFS----GAGSSGY 154 Query: 341 YDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YD RYWTMWKLPMFGC D QVLREI C FP +VR+ Sbjct: 155 YDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRV 194 [53][TOP] >UniRef100_A9TCL7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TCL7_PHYPA Length = 184 Score = 132 bits (332), Expect = 1e-29 Identities = 74/162 (45%), Positives = 92/162 (56%), Gaps = 11/162 (6%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS----VRPMAALKPAV-------KAAPVAAPAQANQMMVWT 154 +AV A S+ AA + A S+ V+ + LKPA K V ++ M VW Sbjct: 7 SAVAAPVSLGAAASSVAASNESATVKAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWN 66 Query: 155 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 334 P+ FETFSYLPPL+D+QIA QVDY++ IPC+EF +N S G+ S Sbjct: 67 PIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFS----GAGSS 122 Query: 335 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVLREI C FP +VR+ Sbjct: 123 GYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRV 164 [54][TOP] >UniRef100_Q43832 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Spinacia oleracea RepID=RBS2_SPIOL Length = 180 Score = 132 bits (332), Expect = 1e-29 Identities = 75/164 (45%), Positives = 97/164 (59%), Gaps = 12/164 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVAR-PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMV 148 MA+ + S+ A V+R PA++S V P LK PA K +N M V Sbjct: 1 MASSVLSSAAVATVSRTPAQASMVAPFTGLKSTVGFPATKKNDDITSLASNGGRVQCMKV 60 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W N K +ET SYLPPL+ +Q+A QVDY++ N W+PCLEF E+D +V E G Sbjct: 61 WPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEF-ETDHGFVYREHHNSPG-- 117 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC DP QVL E+ C K +P+A++R+ Sbjct: 118 ---YYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRI 158 [55][TOP] >UniRef100_A9U4X7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U4X7_PHYPA Length = 182 Score = 132 bits (331), Expect = 2e-29 Identities = 75/168 (44%), Positives = 95/168 (56%), Gaps = 16/168 (9%) Frame = +2 Query: 5 MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------ 139 MA+++A S+V S+AV+ SSV+ + LK A + A + Q Sbjct: 1 MASIVAASTVVAPAAFAAASSAVSTSEASSVKAFSGLKSATLFSSKAQTLSSVQNGSRVQ 60 Query: 140 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 316 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQNLIPCLEFD------VNANGVSR 114 Query: 317 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 + S YYD RYWTMWKLPMFGC+D QVLREI C K FP +VR+ Sbjct: 115 TNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRV 162 [56][TOP] >UniRef100_A9S3R8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S3R8_PHYPA Length = 181 Score = 132 bits (331), Expect = 2e-29 Identities = 76/168 (45%), Positives = 94/168 (55%), Gaps = 16/168 (9%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS---------VRPMAALKPAV-------KAAPVAAPAQAN 136 MA+++A S+V A A A SS V+ + LK A + + V ++ N Sbjct: 1 MASIVAASTVVAPAAFAAASSGVSTSESTSVKAFSGLKSATLFSSQSQQLSSVQNGSRVN 60 Query: 137 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 316 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF S N S Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSKGVTRENNS--- 117 Query: 317 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 S YYD RYWTMWKLPMFGC+D QVLREI C K FP +VR+ Sbjct: 118 ----SPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRV 161 [57][TOP] >UniRef100_O20253 Ribulose bisphosphate carboxylase small chain n=1 Tax=Spinacia oleracea RepID=O20253_SPIOL Length = 180 Score = 131 bits (329), Expect = 3e-29 Identities = 75/164 (45%), Positives = 97/164 (59%), Gaps = 12/164 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVAR-PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMV 148 MA+ + S+ A V+R PA++S V P LK PA K +N M V Sbjct: 1 MASSVLSSARVATVSRTPAQASMVAPFTGLKSTVGFPATKKNDDITSLASNGGRVQCMKV 60 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W N K +ET SYLPPL+ +Q+A QVDY++ N W+PCLEF E+D +V E G Sbjct: 61 WPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEF-ETDHGFVYREHHNSPG-- 117 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC DP QVL E+ C K +P+A++R+ Sbjct: 118 ---YYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRI 158 [58][TOP] >UniRef100_A9U4X8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U4X8_PHYPA Length = 182 Score = 131 bits (329), Expect = 3e-29 Identities = 75/168 (44%), Positives = 94/168 (55%), Gaps = 16/168 (9%) Frame = +2 Query: 5 MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------ 139 MA+++A S+V S+AV SSV+ + LK A + A + Q Sbjct: 1 MASIVAASTVVAPAAFAAASSAVMTSEASSVKAFSGLKSATLFSSKAQTLSSVQNGSRVQ 60 Query: 140 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 316 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQNLIPCLEFD------VNANGVSR 114 Query: 317 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 + S YYD RYWTMWKLPMFGC+D QVLREI C K FP +VR+ Sbjct: 115 TNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRV 162 [59][TOP] >UniRef100_A9RG04 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RG04_PHYPA Length = 184 Score = 131 bits (329), Expect = 3e-29 Identities = 75/170 (44%), Positives = 95/170 (55%), Gaps = 18/170 (10%) Frame = +2 Query: 5 MAAVIAKSSV-----------SAAVARPARSSVRPMAALKP-------AVKAAPVAAPAQ 130 MA+V+A SS S+ V+ +SV+ + LK A K + V ++ Sbjct: 1 MASVVAASSAVAPAAAFVAASSSGVSTSEATSVKAFSGLKSTTLFSGNARKLSSVQNGSR 60 Query: 131 ANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESA 310 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V++ Sbjct: 61 VQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFD------VNSNGV 114 Query: 311 IRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 R + S YYD RYWTMWKLPMFGC+D QVLREI C K FP YVR+ Sbjct: 115 SRVNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCYVRV 164 [60][TOP] >UniRef100_A7Q6D7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Vitis vinifera RepID=A7Q6D7_VITVI Length = 169 Score = 131 bits (329), Expect = 3e-29 Identities = 59/115 (51%), Positives = 74/115 (64%) Frame = +2 Query: 113 VAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAY 292 V+ ++ + M W P+NNK FET SYLPPLSD+ IA ++DY++ GWIPCLEF E + Sbjct: 39 VSNGSKTHCMKTWNPINNKKFETLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEVGYVF 98 Query: 293 VSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVR 457 N YYD RYWT+WKLPMFGC D QVL EI C K +P+AY+R Sbjct: 99 RKNSQIPG-------YYDGRYWTLWKLPMFGCNDASQVLNEIHECKKTYPNAYIR 146 [61][TOP] >UniRef100_P08706 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Solanum lycopersicum RepID=RBS1_SOLLC Length = 181 Score = 131 bits (329), Expect = 3e-29 Identities = 69/165 (41%), Positives = 97/165 (58%), Gaps = 13/165 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVK------------AAPVAAPAQANQMM 145 MA+ I S+ +A + A++S V P LK A + + + M Sbjct: 1 MASSIVSSAAAATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQ 60 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E+++ +V E+ G Sbjct: 61 VWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETERGFVYRENNSSPG- 118 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL E+ KA+P A+VR+ Sbjct: 119 ----YYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRI 159 [62][TOP] >UniRef100_Q75WT7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=Q75WT7_PHYPA Length = 184 Score = 130 bits (328), Expect = 3e-29 Identities = 72/159 (45%), Positives = 93/159 (58%), Gaps = 7/159 (4%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKPAV-------KAAPVAAPAQANQMMVWTPVN 163 ++ +A SSV+A+ SSV+ + LK A + + V ++ M VW P+ Sbjct: 13 VSVTVASSSVAAS---RESSSVKAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIG 69 Query: 164 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 343 FETFSYLPPLSD+QIA QVDY++ IPC+EF +N S GS S YY Sbjct: 70 QPKFETFSYLPPLSDDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFS----GSGSSGYY 125 Query: 344 DNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 D RYWTMWKLPMFGC D QVLREI C ++P +VR+ Sbjct: 126 DGRYWTMWKLPMFGCTDSSQVLREIQECKTSYPSCWVRV 164 [63][TOP] >UniRef100_B6RHQ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Miscanthus x giganteus RepID=B6RHQ4_9POAL Length = 169 Score = 130 bits (328), Expect = 3e-29 Identities = 65/149 (43%), Positives = 86/149 (57%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ + A + +S+ A + A V+ + M VW NK FET SYL Sbjct: 5 VMASSATAVAPFQWLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPL++EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKL Sbjct: 65 PPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QV +E ++PDAYVR+ Sbjct: 118 PMFGCTDASQVYKEPQEAIASYPDAYVRI 146 [64][TOP] >UniRef100_Q3LFQ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Panax ginseng RepID=Q3LFQ4_PANGI Length = 183 Score = 130 bits (327), Expect = 5e-29 Identities = 74/166 (44%), Positives = 101/166 (60%), Gaps = 14/166 (8%) Frame = +2 Query: 5 MAAVIAKSSVSAAVAR--PARSS-VRPMAALKPAVKAAPV--------AAPAQANQ---M 142 MA+ + S+ AAV+R PA++S V P LK + A PV + P+ + M Sbjct: 1 MASSVISSATVAAVSRAVPAQASMVAPFTGLK-STAAFPVTRKVNDITSLPSNGGRVQCM 59 Query: 143 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 322 VW P+ K FET SYLP L+ EQ++ +VDY++ +GW+PCLEF E + +V E G Sbjct: 60 KVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEF-ELEHGFVYREHHHSPG 118 Query: 323 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL+E+ C K +P+AY+R+ Sbjct: 119 -----YYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRI 159 [65][TOP] >UniRef100_A9SRS0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SRS0_PHYPA Length = 182 Score = 130 bits (326), Expect = 6e-29 Identities = 75/168 (44%), Positives = 94/168 (55%), Gaps = 16/168 (9%) Frame = +2 Query: 5 MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------ 139 MA++IA SSV S+AV+ +SV+ + LK + A + Q Sbjct: 1 MASIIAASSVVAPAALSAASSAVSTSESTSVKAFSGLKSTTLFSSKAQTLSSVQNGSRVQ 60 Query: 140 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 316 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFD------VNANGVSR 114 Query: 317 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 + S YYD RYWTMWKLPMFGC+D QVLREI C K FP +VR+ Sbjct: 115 ANNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRV 162 [66][TOP] >UniRef100_A9RJ57 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJ57_PHYPA Length = 181 Score = 129 bits (324), Expect = 1e-28 Identities = 75/168 (44%), Positives = 96/168 (57%), Gaps = 16/168 (9%) Frame = +2 Query: 5 MAAVIAKSSVSA----AVARPARSS-----VRPMAALKPAV-------KAAPVAAPAQAN 136 MA+ +A S+V A A A PA S+ V+ + LK A ++ V ++ Sbjct: 1 MASTVAASAVVAPTAFAAASPAASTSGSTTVKAFSGLKSATVFSGKAQNSSSVQNGSRVQ 60 Query: 137 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 316 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF ++ +N S Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNANGVSRTNNS--- 117 Query: 317 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 S YYD RYWTMWKLPMFGC+D QVLREI C K FP +VR+ Sbjct: 118 ----SPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRV 161 [67][TOP] >UniRef100_A9U377 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U377_PHYPA Length = 182 Score = 129 bits (323), Expect = 1e-28 Identities = 74/168 (44%), Positives = 93/168 (55%), Gaps = 16/168 (9%) Frame = +2 Query: 5 MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------ 139 MA+V+A S++ SA+V +SV+ + LK A A + Q Sbjct: 1 MASVVAASTIVAPAAFAAASASVGSADSTSVKAFSGLKSATLFTSKAQTLSSVQNRSRVQ 60 Query: 140 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 316 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFD------VNANGVSR 114 Query: 317 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 + S YYD RYWTMWKLPMFGC+D QVLREI C K FP +VR+ Sbjct: 115 TNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRV 162 [68][TOP] >UniRef100_A9TWU8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TWU8_PHYPA Length = 183 Score = 129 bits (323), Expect = 1e-28 Identities = 71/159 (44%), Positives = 91/159 (57%), Gaps = 7/159 (4%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKP-------AVKAAPVAAPAQANQMMVWTPVN 163 + A A ++ S+AV+ SSV+ + LK A + V ++ M VW P+ Sbjct: 12 VVAPTAFAAASSAVSTSESSSVKAFSGLKSNTLFSSKAQTLSSVQNGSRVQCMQVWNPIG 71 Query: 164 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 343 FETFSYLPPLSD+ IA QV+Y++ IPCLEF ++ +N S S YY Sbjct: 72 MTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNANGVSRTNNS-------SPGYY 124 Query: 344 DNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 D RYWTMWKLPMFGC D QVLREI C K FP +VR+ Sbjct: 125 DGRYWTMWKLPMFGCNDSAQVLREIEECKKTFPGCFVRV 163 [69][TOP] >UniRef100_A9TT85 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TT85_PHYPA Length = 183 Score = 129 bits (323), Expect = 1e-28 Identities = 75/167 (44%), Positives = 93/167 (55%), Gaps = 15/167 (8%) Frame = +2 Query: 5 MAAVIAKS---SVSAAVARPAR-----SSVRPMAALKPAVKAAPVAAPAQANQ------- 139 MA+ +A S VS A A PA +SV+ + LK A + A + Q Sbjct: 1 MASAVASSVVAPVSLAAASPAAVSRDSTSVKAFSGLKSATLFSSQAQTLSSVQNGSRVQC 60 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW P+ FETFSYLPPL+D++IA QVDY++ IPC+EF +N S Sbjct: 61 MQVWNPIGQPKFETFSYLPPLTDDEIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFS---- 116 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G+ S YYD RYWTMWKLPMFGC D QVLREI C FP +VR+ Sbjct: 117 GAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTQFPSCWVRV 163 [70][TOP] >UniRef100_P19309 Ribulose bisphosphate carboxylase small chain SSU40A, chloroplastic n=1 Tax=Lemna gibba RepID=RBS3_LEMGI Length = 177 Score = 129 bits (323), Expect = 1e-28 Identities = 71/161 (44%), Positives = 93/161 (57%), Gaps = 16/161 (9%) Frame = +2 Query: 26 SSVSAAVAR--PARSSVRPMAALKPAVKAAPVAAPAQANQ--------------MMVWTP 157 +S +AAVAR PA+SS+ P A + +V P A +AN M VW P Sbjct: 7 ASTAAAVARAGPAQSSMVPFNACRSSV---PFPATRKANNNLSTLPGNGGRVSCMQVWPP 63 Query: 158 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 337 K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + S Sbjct: 64 EGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA-------SPG 116 Query: 338 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QV+ E+ KA+P+ +VR+ Sbjct: 117 YYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRI 157 [71][TOP] >UniRef100_P07179 Ribulose bisphosphate carboxylase small chain 2A, chloroplastic n=1 Tax=Solanum lycopersicum RepID=RBS2A_SOLLC Length = 180 Score = 129 bits (323), Expect = 1e-28 Identities = 71/162 (43%), Positives = 96/162 (59%), Gaps = 11/162 (6%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ------MMVWT 154 AAV +S+V+ A S V P LK P K + + A+ M VW Sbjct: 9 AAVATRSNVTQA------SMVAPFTGLKSSATFPVTKKQNLDITSIASNGGRVSCMQVWP 62 Query: 155 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 334 P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E++ +V E+ + S Sbjct: 63 PINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYREN-----NKSP 116 Query: 335 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL E+ KA+P A+VR+ Sbjct: 117 GYYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRI 158 [72][TOP] >UniRef100_Q43110 Ribulose bisphosphate carboxylase small chain n=1 Tax=Pteris vittata RepID=Q43110_PTEVI Length = 174 Score = 128 bits (322), Expect = 2e-28 Identities = 71/160 (44%), Positives = 90/160 (56%), Gaps = 8/160 (5%) Frame = +2 Query: 5 MAAVIAKSSVSA-AVARPARSSVRPMAALKPAVKAAPVAAPAQA-------NQMMVWTPV 160 MA ++A +VSA + A A S + + LK AP A A + M+VW P Sbjct: 1 MATMLAAMAVSAPSCAAAAESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPY 60 Query: 161 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 340 +NK FET SYLPPL+++QIA QV+Y+V GW PC+EF Y R Y Sbjct: 61 DNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGSVY-------REHFHGSGY 113 Query: 341 YDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YD RYW MWKLPMFGC D VLREI C K +P A++R+ Sbjct: 114 YDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRV 153 [73][TOP] >UniRef100_P16032 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS1_MESCR Length = 182 Score = 128 bits (322), Expect = 2e-28 Identities = 73/165 (44%), Positives = 95/165 (57%), Gaps = 13/165 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVAR-PARSS-VRPMAALKPAVKAAPVAAP-----------AQANQMM 145 MA+ + S+ A V R PA++S V P LK +V A PV + M Sbjct: 1 MASSMVSSAAVATVNRTPAQASMVAPFNGLK-SVAAFPVTKKNNDITSVATNGGRVQCMQ 59 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P+ K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G Sbjct: 60 VWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG- 117 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC DP QV+ E+ KA+P+A++R+ Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRI 158 [74][TOP] >UniRef100_A9YTZ8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Solanum tuberosum RepID=A9YTZ8_SOLTU Length = 181 Score = 128 bits (321), Expect = 2e-28 Identities = 66/157 (42%), Positives = 95/157 (60%), Gaps = 6/157 (3%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------MMVWTPVNNK 169 AAV +++V+ A + A + AA P + + + A+ M VW P+N K Sbjct: 9 AAVATRTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPINTK 68 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ +V E+ G YYD Sbjct: 69 KYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSPG-----YYDG 122 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLPMFGC D QVL E+ C K++P A++R+ Sbjct: 123 RYWTMWKLPMFGCTDATQVLAEVQECKKSYPQAWIRI 159 [75][TOP] >UniRef100_P18960 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Silene latifolia subsp. alba RepID=RBS_SILPR Length = 177 Score = 128 bits (321), Expect = 2e-28 Identities = 69/164 (42%), Positives = 95/164 (57%), Gaps = 12/164 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPA------------QANQMMV 148 MA++++ ++V A + V P + LK + A PV+ + + N M V Sbjct: 1 MASLMSNAAVVTASTAAQANMVAPFSGLK-STSAFPVSRKSNVDITSLATNGGRVNCMQV 59 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W P N K FET SYLP LS+E + +++Y++ GW+PCLEF E A+V E+ G Sbjct: 60 WPPRNLKKFETLSYLPTLSEESLLKEINYLLIKGWVPCLEF-EVGPAHVYRENNKSPG-- 116 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QV E+V C A+PDA+VR+ Sbjct: 117 ---YYDGRYWTMWKLPMFGCTDASQVAAEVVECKNAYPDAHVRI 157 [76][TOP] >UniRef100_Q96542 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Betula pendula RepID=RBS_BETVE Length = 182 Score = 128 bits (321), Expect = 2e-28 Identities = 76/167 (45%), Positives = 95/167 (56%), Gaps = 15/167 (8%) Frame = +2 Query: 5 MAAVIAKSSVSAAVAR--PARSS-VRPMAALKPAVKAAPVAAPA------------QANQ 139 MA + S+ AAV+R PA+SS V P LK + A PV + Sbjct: 1 MACSMISSATVAAVSRASPAQSSMVAPFTCLK-STSAFPVTQKTNNDITSIASNGGRVQC 59 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW P+ K FET SYLPPLS EQ+A +VDY++ IPCLEF E + +V E Sbjct: 60 MQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEF-ELEHGFVYREHNRSP 118 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPMFGC D QVL+E+ C KA+P A++R+ Sbjct: 119 G-----YYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRI 160 [77][TOP] >UniRef100_P26576 Ribulose bisphosphate carboxylase small chain 2B, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBSB_SOLTU Length = 180 Score = 128 bits (321), Expect = 2e-28 Identities = 71/165 (43%), Positives = 97/165 (58%), Gaps = 13/165 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP------------AQANQMM 145 MA+ I S+ A A A++S V P LK + + PV+ + M Sbjct: 1 MASSIVSSAAVATRANGAQASMVGPFTGLK-STASFPVSRKQNLDITSIASNGGRVRCMQ 59 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+ + Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYREN-----N 113 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 S YYD RYWTMWKLPMFGC D QVL E+ KA+P A++R+ Sbjct: 114 KSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRI 158 [78][TOP] >UniRef100_Q08185 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS5_MESCR Length = 182 Score = 128 bits (321), Expect = 2e-28 Identities = 68/157 (43%), Positives = 91/157 (57%), Gaps = 10/157 (6%) Frame = +2 Query: 20 AKSSVSAAVARPARSSVRPMAALKPAVKAAPV----------AAPAQANQMMVWTPVNNK 169 A ++++AA + V P LK ++ A PV A+ Q MVW P+ K Sbjct: 9 AATTMAAATTTAQANMVAPFNGLK-SISAFPVTRKNNDITSVASNGGRVQCMVWPPLGMK 67 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G YYD Sbjct: 68 KFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG-----YYDG 121 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLPMFGC DP QV+ E+ KA+P+A++R+ Sbjct: 122 RYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRI 158 [79][TOP] >UniRef100_P05349 Ribulose bisphosphate carboxylase small chain 3B, chloroplastic n=1 Tax=Solanum lycopersicum RepID=RBS3B_SOLLC Length = 180 Score = 128 bits (321), Expect = 2e-28 Identities = 70/165 (42%), Positives = 97/165 (58%), Gaps = 13/165 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP------------AQANQMM 145 MA+ I S+ A A++S V P LK + + PV+ + + M Sbjct: 1 MASSIVSSAAVATRGNGAQASMVAPFTGLK-STASFPVSRKQNLDITSIASNGGRVSCMQ 59 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E++ +V E+ G Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYRENHKSPG- 117 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL E+ KA+P A+VR+ Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRI 158 [80][TOP] >UniRef100_Q04450 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS2_MESCR Length = 180 Score = 128 bits (321), Expect = 2e-28 Identities = 68/163 (41%), Positives = 91/163 (55%), Gaps = 11/163 (6%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPA-----------QANQMMVW 151 MA++++ ++V S V P LK +V A PV + + M VW Sbjct: 1 MASMMSNAAVVGRTTPAQASMVAPFTGLK-SVSAFPVTKKSNDITSIASNGGRVQCMQVW 59 Query: 152 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 331 P+ K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G Sbjct: 60 PPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG--- 115 Query: 332 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC DP QV+ E+ KA+P+A+ R+ Sbjct: 116 --YYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFTRI 156 [81][TOP] >UniRef100_A9T3X7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T3X7_PHYPA Length = 179 Score = 127 bits (320), Expect = 3e-28 Identities = 73/164 (44%), Positives = 93/164 (56%), Gaps = 12/164 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPAR-----SSVRPMAALKPAVKAAPVAAP-------AQANQMMV 148 MA+ + S+ AA A PA SSV+ + LK +A A ++ M V Sbjct: 1 MASAVVSVSIVAA-ASPASVCRESSSVKQFSGLKSTTLSASKARRLSSVHNGSRVQCMQV 59 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W P+ FETFSYLPPL+D+QIA QVD+++ IPC+EF +N S G Sbjct: 60 WNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFS----GPG 115 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 S YYD RYWTMWKLPMFGC D QVLREI C ++FP +VR+ Sbjct: 116 SSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRV 159 [82][TOP] >UniRef100_A9T3W5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T3W5_PHYPA Length = 179 Score = 127 bits (320), Expect = 3e-28 Identities = 71/163 (43%), Positives = 93/163 (57%), Gaps = 11/163 (6%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPA----RSSVRPMAALKP-------AVKAAPVAAPAQANQMMVW 151 MA+ + S+ AA + A SSV+ + LK A + + V ++ M VW Sbjct: 1 MASAVVSVSIVAAASPAAVCRESSSVKQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVW 60 Query: 152 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 331 P+ FETFSYLPPL+D+QIA QVD+++ IPC+EF +N S G S Sbjct: 61 NPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFS----GPGS 116 Query: 332 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVLREI C ++FP +VR+ Sbjct: 117 SGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRV 159 [83][TOP] >UniRef100_P32764 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBS3_SOLTU Length = 181 Score = 127 bits (320), Expect = 3e-28 Identities = 69/165 (41%), Positives = 94/165 (56%), Gaps = 13/165 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVK------------AAPVAAPAQANQMM 145 MA+ I S+ A + A++S V P LK A + + + M Sbjct: 1 MASSIVSSAAVATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQ 60 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+ G Sbjct: 61 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSPG- 118 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL E+ KA+P A++R+ Sbjct: 119 ----YYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWIRI 159 [84][TOP] >UniRef100_Q9XGX4 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Amaranthus hypochondriacus RepID=RBS3_AMAHP Length = 180 Score = 127 bits (320), Expect = 3e-28 Identities = 67/156 (42%), Positives = 92/156 (58%), Gaps = 4/156 (2%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPA----QANQMMVWTPVNNKM 172 + AV+ S A + P + ++ +A+ K+ + + A + M VW PV K Sbjct: 10 ITAVVGASGAQANMVAPF-NGLKSIASFPVTRKSNDITSIASNGGRVQCMQVWPPVGKKK 68 Query: 173 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 352 FET SYLPPLSD Q+ AQV Y++ NGWIPC+EF E + +V E+ G Y D R Sbjct: 69 FETLSYLPPLSDAQLLAQVQYLLNNGWIPCIEF-ELEHPFVYRENHRSPG-----YQDGR 122 Query: 353 YWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YWTMWKLPM+GC DP QVL E+ KA+P A++R+ Sbjct: 123 YWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRI 158 [85][TOP] >UniRef100_P10795 Ribulose bisphosphate carboxylase small chain 1A, chloroplastic n=2 Tax=Arabidopsis thaliana RepID=RBS1A_ARATH Length = 180 Score = 127 bits (320), Expect = 3e-28 Identities = 70/162 (43%), Positives = 97/162 (59%), Gaps = 14/162 (8%) Frame = +2 Query: 17 IAKSSVSAA--VARPARSS-VRPMAALK-----PAVKAAP------VAAPAQANQMMVWT 154 +A S +S+A VA PA+++ V P LK PA + A + + N M VW Sbjct: 1 MASSMLSSATMVASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWP 60 Query: 155 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 334 P+ K FET SYLP L+D ++A +VDY++ N WIPC+EF E + +V E G Sbjct: 61 PIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEF-ELEHGFVYREHGNSPG---- 115 Query: 335 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLP+FGC D QVL+E+ C K +P+A++R+ Sbjct: 116 -YYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRI 156 [86][TOP] >UniRef100_B9S5G3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ricinus communis RepID=B9S5G3_RICCO Length = 181 Score = 127 bits (319), Expect = 4e-28 Identities = 70/158 (44%), Positives = 94/158 (59%), Gaps = 13/158 (8%) Frame = +2 Query: 26 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNN 166 SS S + + PA+++ V P LK A + PV A + M VW P+ Sbjct: 7 SSASVSRSSPAQATMVAPFTGLKSAA-SFPVTRKANNDITSIASNGGRVQCMQVWPPLGK 65 Query: 167 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 346 K FET SYLP L+DEQ+A +VDY++ GWIPCLEF E + +V E+ G YYD Sbjct: 66 KKFETLSYLPDLTDEQLAKEVDYLLRKGWIPCLEF-ELEHGFVYRENHRSPG-----YYD 119 Query: 347 NRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLPMFGC D QVL+E+ KA+P++++R+ Sbjct: 120 GRYWTMWKLPMFGCSDSTQVLKELDEAKKAYPNSFIRI 157 [87][TOP] >UniRef100_A9YTZ7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Solanum tuberosum RepID=A9YTZ7_SOLTU Length = 181 Score = 127 bits (319), Expect = 4e-28 Identities = 66/157 (42%), Positives = 95/157 (60%), Gaps = 6/157 (3%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------MMVWTPVNNK 169 AAV +++V+ A + A + AA P + + + A+ M VW P+N K Sbjct: 9 AAVATRTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPINMK 68 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ +V E+ G YYD Sbjct: 69 KYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSPG-----YYDG 122 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLPMFGC D QVL E+ C K++P A++R+ Sbjct: 123 RYWTMWKLPMFGCTDTTQVLAEVQECKKSYPQAWIRI 159 [88][TOP] >UniRef100_A9S8M6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S8M6_PHYPA Length = 182 Score = 127 bits (319), Expect = 4e-28 Identities = 75/169 (44%), Positives = 92/169 (54%), Gaps = 17/169 (10%) Frame = +2 Query: 5 MAAVIAKSSV----------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ----- 139 MA+V+A SS S+ V+ +SV+ + LK A + A + Q Sbjct: 1 MASVVAASSAVAPAAAFGAASSGVSTSEATSVKAFSGLKSATLFSGNAQTLSSVQNGSRV 60 Query: 140 --MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAI 313 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF S+ N S Sbjct: 61 QCMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSNGVSRVNNS-- 118 Query: 314 RFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 S YYD RYWTMWKLPMFGC+D QVLREI C FP YVR+ Sbjct: 119 -----SPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKTTFPGCYVRV 162 [89][TOP] >UniRef100_P26575 Ribulose bisphosphate carboxylase small chain 2A, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBSA_SOLTU Length = 180 Score = 127 bits (319), Expect = 4e-28 Identities = 70/165 (42%), Positives = 96/165 (58%), Gaps = 13/165 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP------------AQANQMM 145 MA+ + S+ A A++S V P LK A + PV+ + M Sbjct: 1 MASSVMSSAAVATRGNGAQASMVAPFTGLKSAA-SFPVSRKQNLDITSIASNGGRVRCMQ 59 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+ + Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYREN-----N 113 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 S YYD RYWTMWKLPMFGC D QVL E+ KA+P A++R+ Sbjct: 114 KSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRI 158 [90][TOP] >UniRef100_Q08186 Ribulose bisphosphate carboxylase small chain 6, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS6_MESCR Length = 186 Score = 127 bits (319), Expect = 4e-28 Identities = 70/162 (43%), Positives = 92/162 (56%), Gaps = 12/162 (7%) Frame = +2 Query: 11 AVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVA---------APAQANQ---MMVWT 154 A +A ++ S + A S V P LK +V A PV P+ + M VW Sbjct: 9 AAVATTAASRSAGAQA-SMVAPFTGLK-SVSAFPVTRKSSNDLSTVPSNGGKVQCMQVWP 66 Query: 155 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 334 P+ K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G Sbjct: 67 PLGKKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG---- 121 Query: 335 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC DP QV+ E+ KA+P+A++R+ Sbjct: 122 -YYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRI 162 [91][TOP] >UniRef100_P07180 Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic n=1 Tax=Solanum lycopersicum RepID=RBS3A_SOLLC Length = 180 Score = 127 bits (319), Expect = 4e-28 Identities = 69/165 (41%), Positives = 97/165 (58%), Gaps = 13/165 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP------------AQANQMM 145 MA+ + S+ A A++S V P LK + + PV+ + + M Sbjct: 1 MASSVMSSAAVATRGNGAQASMVAPFTGLK-STASFPVSRKQNLDITSIASNGGRVSCMQ 59 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E++ +V E+ G Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYRENHKSPG- 117 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL E+ KA+P A+VR+ Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRI 158 [92][TOP] >UniRef100_P26574 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBS1_SOLTU Length = 181 Score = 127 bits (319), Expect = 4e-28 Identities = 66/157 (42%), Positives = 95/157 (60%), Gaps = 6/157 (3%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------MMVWTPVNNK 169 AAV +++V+ A + A + AA P + + + A+ M VW P+N K Sbjct: 9 AAVATRTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPINMK 68 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ +V E+ G YYD Sbjct: 69 KYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSPG-----YYDG 122 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLPMFGC D QVL E+ C K++P A++R+ Sbjct: 123 RYWTMWKLPMFGCTDATQVLAEVQECKKSYPQAWIRI 159 [93][TOP] >UniRef100_C6T529 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=C6T529_SOYBN Length = 172 Score = 127 bits (318), Expect = 5e-28 Identities = 57/106 (53%), Positives = 68/106 (64%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M W P+NNK FET SYLPPLSDE IA ++DY++ GWIPCLEF E N Sbjct: 48 MKTWNPINNKKFETLSYLPPLSDESIAKEIDYMLKKGWIPCLEFDELGCVRRENSHMPE- 106 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVR 457 YYD RYWT+WKLPMF C D QVL+EI C + +P+AY+R Sbjct: 107 ------YYDGRYWTLWKLPMFACSDSSQVLKEIHECRRVYPNAYIR 146 [94][TOP] >UniRef100_A9TVU8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TVU8_PHYPA Length = 176 Score = 127 bits (318), Expect = 5e-28 Identities = 71/163 (43%), Positives = 94/163 (57%), Gaps = 11/163 (6%) Frame = +2 Query: 5 MAAVI----AKSSVSAAVARPARSSVRPMAALKPAV----KAAPVAAPAQANQ---MMVW 151 MA+++ A ++ S+ ++ +S + LK A KA +++ ++ M VW Sbjct: 1 MASIVVTPAAFAAASSGLSTSQSTSAKAFTGLKSATLFPSKAQTLSSVQNGSRVQCMQVW 60 Query: 152 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 331 P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF S+ N S S Sbjct: 61 NPIGQTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSNGVSRVNNS-------S 113 Query: 332 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC+D QVLREI C K FP YVR+ Sbjct: 114 PGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCYVRV 156 [95][TOP] >UniRef100_A9S8M9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S8M9_PHYPA Length = 182 Score = 127 bits (318), Expect = 5e-28 Identities = 75/169 (44%), Positives = 91/169 (53%), Gaps = 17/169 (10%) Frame = +2 Query: 5 MAAVIAKSSV----------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ----- 139 MA V+A SS S+ V+ +SV+ + LK A + A + Q Sbjct: 1 MATVVAASSAVAPAAAFGAASSGVSTSEATSVKAFSGLKSATLFSGNAQTLSSVQNGSRV 60 Query: 140 --MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAI 313 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF S+ N S Sbjct: 61 QCMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSNGVSRVNNS-- 118 Query: 314 RFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 S YYD RYWTMWKLPMFGC+D QVLREI C FP YVR+ Sbjct: 119 -----SPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKTTFPGCYVRV 162 [96][TOP] >UniRef100_Q08183 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS3_MESCR Length = 183 Score = 127 bits (318), Expect = 5e-28 Identities = 67/158 (42%), Positives = 89/158 (56%), Gaps = 11/158 (6%) Frame = +2 Query: 20 AKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP-----------AQANQMMVWTPVNN 166 A ++++AA + V P LK +V A PV + M VW P+ Sbjct: 9 AATTMAAATTTAQANMVAPFNGLK-SVSAFPVTRKNNDITSVASNGGRVQCMQVWPPLGK 67 Query: 167 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 346 K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G YYD Sbjct: 68 KKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG-----YYD 121 Query: 347 NRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLPMFGC DP QV+ E+ KA+P+A++R+ Sbjct: 122 GRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRI 159 [97][TOP] >UniRef100_P05348 Ribulose bisphosphate carboxylase small chain, chloroplastic n=2 Tax=Zea mays RepID=RBS_MAIZE Length = 170 Score = 126 bits (317), Expect = 7e-28 Identities = 63/149 (42%), Positives = 86/149 (57%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 ++A S+ + A + +S+ A + + V+ + M VW NK FET SYL Sbjct: 6 MMASSATAVAPFQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYL 65 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS + + QVDY++ NGWIPCLEF++ Y N S S YYD RYWTMWKL Sbjct: 66 PPLSTDDLLKQVDYLLRNGWIPCLEFSKVGFVYREN-------STSPCYYDGRYWTMWKL 118 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QV +E+ K++PDA+ R+ Sbjct: 119 PMFGCNDATQVYKELQEAIKSYPDAFHRV 147 [98][TOP] >UniRef100_P19310 Ribulose bisphosphate carboxylase small chain SSU40B, chloroplastic n=1 Tax=Lemna gibba RepID=RBS4_LEMGI Length = 177 Score = 126 bits (317), Expect = 7e-28 Identities = 69/161 (42%), Positives = 93/161 (57%), Gaps = 16/161 (9%) Frame = +2 Query: 26 SSVSAAVAR--PARSSVRPMAALKPAVKAAPVAAPAQANQ--------------MMVWTP 157 +S +AAVAR PA++++ P A + +V P A +AN M VW P Sbjct: 7 ASTAAAVARAGPAQTNMVPFNACRSSV---PFPATRKANNDLSTLPSNGGRVSCMQVWPP 63 Query: 158 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 337 K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + S Sbjct: 64 EGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA-------SPG 116 Query: 338 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QV+ E+ KA+P+ +VR+ Sbjct: 117 YYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRI 157 [99][TOP] >UniRef100_P22433 Ribulose bisphosphate carboxylase small chain S41, chloroplastic n=1 Tax=Nicotiana sylvestris RepID=RBS2_NICSY Length = 181 Score = 126 bits (317), Expect = 7e-28 Identities = 69/166 (41%), Positives = 95/166 (57%), Gaps = 14/166 (8%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPAR--SSVRPMAALKPAVKAAPVAAP------------AQANQM 142 MA +I S+ + A A S + P LK A + PV+ + M Sbjct: 1 MAFLIMSSAAAVATGTNAAQASMIAPFTGLKSAT-SFPVSRKQNLDITSIASNGGRVQCM 59 Query: 143 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 322 VW P+N K +ET SYLP LS+EQ+ +V+Y++ NGW+PCLEF E++ +V E+ Sbjct: 60 QVWPPINKKKYETLSYLPDLSEEQLLREVEYLLKNGWVPCLEF-ETEHGFVYREN----- 113 Query: 323 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 + S YYD RYWTMWKLPMFGC D QVL E+ KA+P A++R+ Sbjct: 114 NKSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRI 159 [100][TOP] >UniRef100_P26577 Ribulose bisphosphate carboxylase small chain 2C, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBSC_SOLTU Length = 180 Score = 126 bits (316), Expect = 9e-28 Identities = 69/165 (41%), Positives = 96/165 (58%), Gaps = 13/165 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP------------AQANQMM 145 MA+ + S+ A A++S V P LK + + PV+ + M Sbjct: 1 MASSVMSSAAVATRGNGAQASMVAPFTGLK-STASFPVSRKQNLDITSIASNGGRVRCMQ 59 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+ + Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYREN-----N 113 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 S YYD RYWTMWKLPMFGC D QVL E+ KA+P A++R+ Sbjct: 114 KSPGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRI 158 [101][TOP] >UniRef100_P19308 Ribulose bisphosphate carboxylase small chain SSU26, chloroplastic n=1 Tax=Lemna gibba RepID=RBS2_LEMGI Length = 177 Score = 126 bits (316), Expect = 9e-28 Identities = 70/165 (42%), Positives = 93/165 (56%), Gaps = 13/165 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MM 145 MA+ + S+ + A A PA+S+ V P L+ +V A P A N M Sbjct: 1 MASSMMASTAAVARAGPAQSNMVAPFNGLRSSV-AFPATRKANKNLSTLPSNGGKVSCMQ 59 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + Sbjct: 60 VWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA------ 113 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 S YYD RYWTMWKLPMFGC D QV+ E+ KA+P+ +VR+ Sbjct: 114 -SPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRI 157 [102][TOP] >UniRef100_P69250 Ribulose bisphosphate carboxylase small chain, chloroplastic n=2 Tax=Nicotiana RepID=RBS1_NICSY Length = 180 Score = 126 bits (316), Expect = 9e-28 Identities = 69/163 (42%), Positives = 95/163 (58%), Gaps = 12/163 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQMMVW 151 AAV +S+V+ A + V P LK A + PV+ + M VW Sbjct: 9 AAVATRSNVAQA------NMVAPFTGLKSAA-SFPVSRKQNLDITSIASNGGRVQCMQVW 61 Query: 152 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 331 P+N K +ET SYLP LS EQ+ ++V+Y++ NGW+PCLEF E++ +V E+ + S Sbjct: 62 PPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEF-ETEHGFVYREN-----NKS 115 Query: 332 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL E+ KA+P A++R+ Sbjct: 116 PGYYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRI 158 [103][TOP] >UniRef100_Q9SEB9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Lactuca sativa RepID=Q9SEB9_LACSA Length = 181 Score = 125 bits (315), Expect = 1e-27 Identities = 67/165 (40%), Positives = 96/165 (58%), Gaps = 13/165 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPA------------QANQMM 145 MA++ + + + + PA++S+ P LK V A PV A + M Sbjct: 1 MASISSSAVATVNRSTPAQASLAAPFTGLKSNV-AFPVTKKANNDFSSLPSNGGRVQCMK 59 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P+ K +ET SYLPPLSDE ++ ++DY++ N W+PCLEF E + +V E G Sbjct: 60 VWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEF-ELEHGFVYREHHHSPG- 117 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QV++E+ C K +P+A++R+ Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRV 158 [104][TOP] >UniRef100_Q84NG4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Flaveria bidentis RepID=Q84NG4_FLABI Length = 173 Score = 125 bits (315), Expect = 1e-27 Identities = 69/157 (43%), Positives = 92/157 (58%), Gaps = 12/157 (7%) Frame = +2 Query: 26 SSVSAAVAR-PARSSVRPMAALKPAVKAAPVAA--------PAQANQ---MMVWTPVNNK 169 +S+ A VA P + V P LK A A PV P+ + M VW PV K Sbjct: 2 ASIPATVAAVPQTNMVAPFTGLK-ANAAFPVTKKVNGFSTLPSNGGRVQCMKVWPPVGKK 60 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD Sbjct: 61 KYETLSYLPELTEAQLAKEVDYLIRNKWVPCLEF-ELEHGFVYRENASSPG-----YYDG 114 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLPMFGC D QV++E+ C K +P A++R+ Sbjct: 115 RYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRI 151 [105][TOP] >UniRef100_A0FIP7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Camellia sinensis RepID=A0FIP7_CAMSI Length = 176 Score = 125 bits (315), Expect = 1e-27 Identities = 68/161 (42%), Positives = 91/161 (56%), Gaps = 13/161 (8%) Frame = +2 Query: 17 IAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAP------------AQANQMMVWTP 157 +A S +S+AV PA++S+ P LK + A PV + M VW P Sbjct: 1 MAASIISSAVVAPAQASMAAPFTGLK-STSAFPVTRKLDTDITSLASNGGRVQCMKVWPP 59 Query: 158 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 337 + K FET SYLPPL+ Q+ +VDY++ GWIPCLEF+ V R + S Sbjct: 60 LGLKKFETLSYLPPLTQAQLGKEVDYLIRLGWIPCLEFS------VQGGFVYREHNKSPG 113 Query: 338 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL+E+ C K +P +++R+ Sbjct: 114 YYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPQSFIRI 154 [106][TOP] >UniRef100_O65194 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Medicago sativa RepID=RBS_MEDSA Length = 180 Score = 125 bits (315), Expect = 1e-27 Identities = 56/111 (50%), Positives = 76/111 (68%) Frame = +2 Query: 128 QANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNES 307 + N M VW PV K FET SYLPPL++EQ+A +V+Y++ GWIPCLEF E +K +V E+ Sbjct: 54 RVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEF-ELEKGFVYREN 112 Query: 308 AIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMW+LP+FG D QVL+E+ C +PD+++R+ Sbjct: 113 HRSPG-----YYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRI 158 [107][TOP] >UniRef100_P19311 Ribulose bisphosphate carboxylase small chain SSU5A, chloroplastic n=1 Tax=Lemna gibba RepID=RBS5_LEMGI Length = 177 Score = 125 bits (315), Expect = 1e-27 Identities = 70/165 (42%), Positives = 94/165 (56%), Gaps = 13/165 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMM 145 MA+ + S+ + A A PA+SS V P L+ +V A P A + + M Sbjct: 1 MASSMMASTAAVARAGPAQSSMVAPFNGLRSSV-AFPATRKANNDLSTLPSNGGRVSCMQ 59 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + Sbjct: 60 VWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA------ 113 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 S YYD RYWTMWKLPMFGC D QV+ E+ KA+P+ +VR+ Sbjct: 114 -SPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRI 157 [108][TOP] >UniRef100_Q08184 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS4_MESCR Length = 183 Score = 125 bits (315), Expect = 1e-27 Identities = 66/158 (41%), Positives = 89/158 (56%), Gaps = 11/158 (6%) Frame = +2 Query: 20 AKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP-----------AQANQMMVWTPVNN 166 A ++++AA + V P LK ++ A PV + M VW P+ Sbjct: 9 AATTMAAATTTAQANMVAPFNGLK-SISAFPVTRKNNDITSVASNGGRVQCMQVWPPLGM 67 Query: 167 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 346 K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G YYD Sbjct: 68 KKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG-----YYD 121 Query: 347 NRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLPMFGC DP QV+ E+ KA+P+A++R+ Sbjct: 122 GRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRI 159 [109][TOP] >UniRef100_A4SA23 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4SA23_OSTLU Length = 177 Score = 125 bits (314), Expect = 1e-27 Identities = 54/101 (53%), Positives = 71/101 (70%), Gaps = 1/101 (0%) Frame = +2 Query: 161 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG-SVSCL 337 + +MFETFS+LPPLSD +I+ QV Y++ NGW PC+EF +S AY S++ Sbjct: 43 SRRMFETFSFLPPLSDAEISKQVQYLLNNGWTPCIEFEDSAHAYTDGHGWANMDTSINAG 102 Query: 338 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYDNRYW MWKLPM+GC++P +V+ EI C K FPD YVR+ Sbjct: 103 YYDNRYWVMWKLPMYGCQNPDEVIAEINTCIKCFPDCYVRV 143 [110][TOP] >UniRef100_O48550 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Zantedeschia aethiopica RepID=RBS_ZANAE Length = 178 Score = 125 bits (314), Expect = 1e-27 Identities = 67/163 (41%), Positives = 92/163 (56%), Gaps = 11/163 (6%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ----------MMVW 151 MA+ + S+ + + PA+S+ V P A L + A +++ M VW Sbjct: 1 MASSMMVSTAAVSRTSPAQSNMVVPFAGLHSSAAFPVTRKFADSSKLPSNGLRVRCMQVW 60 Query: 152 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 331 P K FET SYLPPL+ EQ+ +VDY++ NGWIPC+EF + Y + S Sbjct: 61 PPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHN-------S 113 Query: 332 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL+E+ C+KA+PD + R+ Sbjct: 114 PGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRI 156 [111][TOP] >UniRef100_Q41351 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Stellaria longipes RepID=RBS_STELP Length = 180 Score = 125 bits (314), Expect = 1e-27 Identities = 68/164 (41%), Positives = 95/164 (57%), Gaps = 12/164 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ------MMV 148 MA+ I S+ A + A++S V P LK P + + + A+ M V Sbjct: 1 MASSIMSSAAVATRSNGAQASMVAPFTGLKSNASFPVSRKTNLDITSIASNGGRVRCMQV 60 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W P+N K +ET SYLP LS EQ+ ++++Y++ NGW+PCLEF E++ +V E G Sbjct: 61 WPPINMKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYREHTSSPG-- 117 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QV E+ KA+PDA++R+ Sbjct: 118 ---YYDGRYWTMWKLPMFGCTDATQVAAEVQEAKKAYPDAHIRI 158 [112][TOP] >UniRef100_Q39746 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS4_FLAPR Length = 178 Score = 125 bits (314), Expect = 1e-27 Identities = 68/161 (42%), Positives = 96/161 (59%), Gaps = 11/161 (6%) Frame = +2 Query: 11 AVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTP 157 A I+ + + + A PA+++ V P LK PA K A + +N M VW P Sbjct: 2 ASISSTVATVSRAAPAQANMVAPFTGLKSNAAFPATKKANDFSTLPSNGGRVQCMKVWPP 61 Query: 158 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 337 + K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G Sbjct: 62 LGKKKYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG----- 115 Query: 338 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QV++E+ C K +P A++R+ Sbjct: 116 YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRI 156 [113][TOP] >UniRef100_Q39744 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS2_FLAPR Length = 178 Score = 125 bits (314), Expect = 1e-27 Identities = 68/161 (42%), Positives = 96/161 (59%), Gaps = 11/161 (6%) Frame = +2 Query: 11 AVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTP 157 A I+ + + + A PA+++ V P LK PA K A + +N M VW P Sbjct: 2 ASISSTVATVSRAAPAQANMVAPFTGLKSNVAFPATKKANDFSTLPSNGGRVQCMKVWPP 61 Query: 158 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 337 + K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G Sbjct: 62 LGKKRYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG----- 115 Query: 338 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QV++E+ C K +P A++R+ Sbjct: 116 YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRI 156 [114][TOP] >UniRef100_Q42516 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Amaranthus hypochondriacus RepID=RBS1_AMAHP Length = 183 Score = 125 bits (314), Expect = 1e-27 Identities = 70/158 (44%), Positives = 89/158 (56%), Gaps = 11/158 (6%) Frame = +2 Query: 20 AKSSVSAAVARPARSSVRPMAALK-----PAVKAAP---VAAPAQANQ---MMVWTPVNN 166 A + +AA A S V P LK P K + + P+ + M VW PV Sbjct: 9 AAMATTAATAGAQASMVAPFNGLKSFATFPITKKSSNDFSSLPSNGGRVQCMQVWPPVGK 68 Query: 167 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 346 K FET SYLPPLSD Q+ AQV Y++ GWIPC+EF E + +V E+ G Y D Sbjct: 69 KKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEF-ELEHPFVYRENHRSPG-----YQD 122 Query: 347 NRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLPM+GC DP QVL E+ KA+P A++R+ Sbjct: 123 GRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRI 160 [115][TOP] >UniRef100_Q9ZP07 Ribulose bisphosphate carboxylase small chain n=1 Tax=Cicer arietinum RepID=Q9ZP07_CICAR Length = 181 Score = 125 bits (313), Expect = 2e-27 Identities = 65/158 (41%), Positives = 91/158 (57%), Gaps = 16/158 (10%) Frame = +2 Query: 35 SAAVARPARSSVRPMAALKPAVKAAPVAA----------------PAQANQMMVWTPVNN 166 S+AV R+S P A+ P V +A + + M VW P+ Sbjct: 8 SSAVTTVKRASSVPSGAVAPFVGLKSMAGFPVRKVNNDITSIASNGGRVHCMQVWPPIGK 67 Query: 167 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 346 K FET SYLPPL++EQ+ +V+Y++ GW+PCLEF E +K +V E G YYD Sbjct: 68 KKFETLSYLPPLTEEQLLKEVEYLLRKGWVPCLEF-ELEKGFVYREHNNSPG-----YYD 121 Query: 347 NRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLP+FGC + +QVL+E+ KA+P+A+VR+ Sbjct: 122 GRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRI 159 [116][TOP] >UniRef100_B6RHQ5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Miscanthus x giganteus RepID=B6RHQ5_9POAL Length = 121 Score = 125 bits (313), Expect = 2e-27 Identities = 56/105 (53%), Positives = 69/105 (65%) Frame = +2 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW NK FET SYLPPL++EQ+ QVDY++ N W+PCLEF++ Y N S Sbjct: 1 VWPAYGNKKFETLSYLPPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------S 53 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 S YYD RYWTMWKLPMFGC D QV +E+ ++PDAYVR+ Sbjct: 54 TSPCYYDGRYWTMWKLPMFGCTDASQVYKELQEAIASYPDAYVRI 98 [117][TOP] >UniRef100_A9NXP2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=A9NXP2_PICSI Length = 188 Score = 125 bits (313), Expect = 2e-27 Identities = 66/170 (38%), Positives = 98/170 (57%), Gaps = 19/170 (11%) Frame = +2 Query: 5 MAAVIAKSSVSAAVA---RPARSSVRPMAALKPAV---KAAPVAAPAQ------------ 130 MA+V+ S VS+ A P ++ V+ +A+ A+ K+ A A+ Sbjct: 1 MASVMMASMVSSTAALTTMPRKNGVQSLASSVSALNNLKSGSAAFSAKLEWEEKTTTNGS 60 Query: 131 -ANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNES 307 + M VW P+NN+ +ET SYLPPLS E + ++DY+++ GW+PCLEF + +N Sbjct: 61 RVHCMQVWPPINNRKYETLSYLPPLSQESLVKEIDYMISKGWVPCLEFDAVGQIQRTN-- 118 Query: 308 AIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVR 457 G + YYD RYW++WKLPMFGC + QVL E+ C KA+P+AY+R Sbjct: 119 ----GVMVPGYYDGRYWSLWKLPMFGCTNSAQVLSELEECKKAYPNAYIR 164 [118][TOP] >UniRef100_P07089 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Flaveria trinervia RepID=RBS_FLATR Length = 173 Score = 125 bits (313), Expect = 2e-27 Identities = 69/157 (43%), Positives = 92/157 (58%), Gaps = 12/157 (7%) Frame = +2 Query: 26 SSVSAAVAR-PARSSVRPMAALKPAVKAAPVAA--------PAQANQ---MMVWTPVNNK 169 +S+ A VA P + V P LK A A PV P+ + M VW PV K Sbjct: 2 ASIPATVAAVPQTNMVAPFTGLK-ANAAFPVTKKVNGFSTLPSNGGRVQCMKVWPPVGKK 60 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD Sbjct: 61 KYETLSYLPELTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENASSPG-----YYDG 114 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLPMFGC D QV++E+ C K +P A++R+ Sbjct: 115 RYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRI 151 [119][TOP] >UniRef100_P10647 Ribulose bisphosphate carboxylase small chain C, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBS0_SOLTU Length = 181 Score = 125 bits (313), Expect = 2e-27 Identities = 68/165 (41%), Positives = 92/165 (55%), Gaps = 13/165 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVK------------AAPVAAPAQANQMM 145 MA+ I S+ A + A++S V P LK A + + + M Sbjct: 1 MASSIVSSAAVATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQ 60 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E G Sbjct: 61 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYREHNSSPG- 118 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL E+ A+P A++R+ Sbjct: 119 ----YYDGRYWTMWKLPMFGCTDGTQVLAEVQEAKNAYPQAWIRI 159 [120][TOP] >UniRef100_Q43115 Ribulose bisphosphate carboxylase small chain n=1 Tax=Malus x domestica x Pyrus communis RepID=Q43115_9ROSA Length = 179 Score = 124 bits (312), Expect = 2e-27 Identities = 69/164 (42%), Positives = 93/164 (56%), Gaps = 12/164 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA-----------QANQMMV 148 MA+ + S A V+ PA++ V P LK + A PV + + M V Sbjct: 1 MASSMISSGTVATVSAPAQARMVAPFTGLKSS-SAFPVTRKSNDITSIASNGGRVQCMQV 59 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W P+ K FET SYLPPLS E +A +VDY++ W+PCLEF E + +V E+ G Sbjct: 60 WPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEF-ELEHGFVYRENNRSPG-- 116 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL+E+ KA+P +++R+ Sbjct: 117 ---YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRI 157 [121][TOP] >UniRef100_O24574 Ribulose bisphosphate carboxylase small chain n=1 Tax=Zea mays RepID=O24574_MAIZE Length = 170 Score = 124 bits (312), Expect = 2e-27 Identities = 63/149 (42%), Positives = 84/149 (56%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 ++A S+ + A + +S+ A + V+ + M VW NK FET SYL Sbjct: 6 MMASSATAVAPFQGLKSAASLPVARRSTRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYL 65 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS + + QVDY++ NGWIPCLEF++ Y N S S YYD RYWTMWKL Sbjct: 66 PPLSTDDLLKQVDYLLRNGWIPCLEFSKLGFVYREN-------STSPCYYDGRYWTMWKL 118 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QV +E+ A+PDA+ R+ Sbjct: 119 PMFGCTDATQVYKELQEAIAAYPDAFHRV 147 [122][TOP] >UniRef100_B7FHB2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Medicago truncatula RepID=B7FHB2_MEDTR Length = 180 Score = 124 bits (312), Expect = 2e-27 Identities = 67/160 (41%), Positives = 92/160 (57%), Gaps = 18/160 (11%) Frame = +2 Query: 35 SAAVARPARSS------VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPV 160 SAAV +R+S V P LK + A PV + N M VW P+ Sbjct: 6 SAAVTTVSRASSTQANLVAPFTGLKSSA-AFPVTKKTNNDITSIASNGGRVNCMQVWPPI 64 Query: 161 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 340 K FET SYLPPL++EQ+A +V+Y++ GW+PCLEF E +K +V E+ G Y Sbjct: 65 GKKKFETLSYLPPLTEEQLAKEVEYLIRKGWVPCLEF-ELEKGFVYRENHSSPG-----Y 118 Query: 341 YDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YD RYWTMWKLP+FG D QVL+E+ A+P++++R+ Sbjct: 119 YDGRYWTMWKLPLFGATDSSQVLKELAEAKAAYPESFIRI 158 [123][TOP] >UniRef100_P08705 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Helianthus annuus RepID=RBS_HELAN Length = 178 Score = 124 bits (312), Expect = 2e-27 Identities = 67/161 (41%), Positives = 95/161 (59%), Gaps = 16/161 (9%) Frame = +2 Query: 26 SSVSAAVARPARSS------VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTP 157 +S+S++VA +R++ V P LK P K A + +N M VW P Sbjct: 2 ASISSSVATVSRTAPAQANMVAPFTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPP 61 Query: 158 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 337 + K +ET SYLPPL++ Q+A +VDY++ W+PCLEF E + +V E+A G Sbjct: 62 LGLKKYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEF-ELEHGFVYRENARSPG----- 115 Query: 338 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QV++E+ C K +P A++R+ Sbjct: 116 YYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRI 156 [124][TOP] >UniRef100_P26573 Ribulose bisphosphate carboxylase small chain 8B, chloroplastic n=1 Tax=Nicotiana plumbaginifolia RepID=RBS8_NICPL Length = 180 Score = 124 bits (312), Expect = 2e-27 Identities = 68/163 (41%), Positives = 94/163 (57%), Gaps = 12/163 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQMMVW 151 AAV +S+V+ A + V P LK A + PV+ + M VW Sbjct: 9 AAVATRSNVAQA------NMVAPFTGLKSAA-SFPVSRKQNLDITSIASNGGRVQCMQVW 61 Query: 152 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 331 P+N K +ET SYLP LS EQ+ ++++Y++ +GW+PCLEF E+++ +V E G Sbjct: 62 PPINKKKYETLSYLPDLSQEQLLSEIEYLLKSGWVPCLEF-ETERGFVYREHHHSPG--- 117 Query: 332 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL E+ KA+P A+VR+ Sbjct: 118 --YYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWVRI 158 [125][TOP] >UniRef100_Q6RWD8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Capsicum annuum RepID=Q6RWD8_CAPAN Length = 180 Score = 124 bits (311), Expect = 3e-27 Identities = 55/107 (51%), Positives = 73/107 (68%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M+VW P+N K +ET SYLP LSDEQ+ +++Y++ GW+PCLEF E++ +V E Sbjct: 58 MLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEF-ETEHGFVYREHHRSP 116 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPMFGC D QVL E+ KA+P A++R+ Sbjct: 117 G-----YYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWIRI 158 [126][TOP] >UniRef100_Q5ZF97 Ribulose bisphosphate carboxylase small chain n=1 Tax=Plantago major RepID=Q5ZF97_PLAMJ Length = 177 Score = 124 bits (311), Expect = 3e-27 Identities = 68/161 (42%), Positives = 93/161 (57%), Gaps = 9/161 (5%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQ----ANQMMVWTP 157 MA+ + +S +A R + V P A LK PA + A A+ M VW P Sbjct: 1 MASSMLSTSSTAVAGRAQATMVAPYAGLKSTSVFPATRKTGNAKLARNAGKVRCMQVWPP 60 Query: 158 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 337 + K +ET SYLP L+ EQ+A ++DY++ + WIPCLEF E + +V E+ G Sbjct: 61 LGKKKYETLSYLPDLTVEQLAKEIDYLLRSKWIPCLEF-ELEHGFVYRENNRSPG----- 114 Query: 338 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QV+ E+ C K +P+A+VR+ Sbjct: 115 YYDGRYWTMWKLPMFGCTDASQVIAELEECKKEYPNAWVRI 155 [127][TOP] >UniRef100_Q00SG3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus tauri RepID=Q00SG3_OSTTA Length = 191 Score = 124 bits (311), Expect = 3e-27 Identities = 59/136 (43%), Positives = 77/136 (56%), Gaps = 24/136 (17%) Frame = +2 Query: 125 AQANQMMVWTPVNNK-----------------------MFETFSYLPPLSDEQIAAQVDY 235 A A MM+W P NK MFETFS+LPPLSD +IA Q Y Sbjct: 22 ANAKSMMIWRPHGNKYVSRKIKAHARGCVLAITRASRPMFETFSFLPPLSDAEIAKQCQY 81 Query: 236 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLR 412 ++ NGW PC+EF +++ AY S++ LYYDNRYW MWKLPM+GC++ +VL Sbjct: 82 LLNNGWTPCIEFEDAEHAYADGHGWSNLDSSINSLYYDNRYWVMWKLPMYGCQNTDEVLA 141 Query: 413 EIVACTKAFPDAYVRL 460 E+ K FPD Y+R+ Sbjct: 142 EVNMAKKCFPDCYIRV 157 [128][TOP] >UniRef100_B9T1N0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ricinus communis RepID=B9T1N0_RICCO Length = 185 Score = 124 bits (311), Expect = 3e-27 Identities = 70/166 (42%), Positives = 98/166 (59%), Gaps = 14/166 (8%) Frame = +2 Query: 5 MAAVIAKSSVSAAVAR--PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ------M 142 MA+ + ++ A++ R PA++S V P LK P + AN M Sbjct: 1 MASSMLSTATVASLNRASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCM 60 Query: 143 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 322 VW P+ K FET SYLP L+ EQ+A +V+Y++ GW+PCLEF E + +V E+A G Sbjct: 61 QVWPPLGKKKFETLSYLPDLTREQLAKEVEYLLRKGWVPCLEF-ELEHGFVYRENARSPG 119 Query: 323 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D +QVL+E+ KA+P+++VR+ Sbjct: 120 -----YYDGRYWTMWKLPMFGCSDAVQVLKELDEAIKAYPNSFVRI 160 [129][TOP] >UniRef100_A9YTZ9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Solanum tuberosum RepID=A9YTZ9_SOLTU Length = 181 Score = 124 bits (311), Expect = 3e-27 Identities = 65/157 (41%), Positives = 92/157 (58%), Gaps = 6/157 (3%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------MMVWTPVNNK 169 AAV +++V+ A + A + AA P + + + A+ M VW P+N K Sbjct: 9 AAVATRTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPINTK 68 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ V E G YYD Sbjct: 69 KYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGIVYREKHKSPG-----YYDG 122 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYW MWKLPMFGC D QVL E+ C K++P A++R+ Sbjct: 123 RYWNMWKLPMFGCTDATQVLAEVQECKKSYPQAWIRI 159 [130][TOP] >UniRef100_Q41373 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Saccharum sp. RepID=RBS_SACHY Length = 168 Score = 124 bits (311), Expect = 3e-27 Identities = 61/144 (42%), Positives = 82/144 (56%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ +AA + +S+ A + A V+ + M VW NK FET SYL Sbjct: 5 VMASSATAAAPFQGLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPL+ EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKL Sbjct: 65 PPLTQEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117 Query: 374 PMFGCRDPMQVLREIVACTKAFPD 445 PMFGC D QV +E+ ++P+ Sbjct: 118 PMFGCTDASQVYKELQEAIASYPE 141 [131][TOP] >UniRef100_O65349 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Capsicum annuum RepID=RBS_CAPAN Length = 187 Score = 124 bits (311), Expect = 3e-27 Identities = 55/107 (51%), Positives = 73/107 (68%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M+VW P+N K +ET SYLP LSDEQ+ +++Y++ GW+PCLEF E++ +V E Sbjct: 58 MLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEF-ETEHGFVYREHHRSP 116 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPMFGC D QVL E+ KA+P A++R+ Sbjct: 117 G-----YYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWIRI 158 [132][TOP] >UniRef100_B9T055 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ricinus communis RepID=B9T055_RICCO Length = 180 Score = 124 bits (310), Expect = 4e-27 Identities = 66/163 (40%), Positives = 91/163 (55%), Gaps = 12/163 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQMMVW 151 ++++ + S A P S V P LK + PV + + M VW Sbjct: 3 SSIVPSTMASLNRAAPQASMVAPFTGLKSS-SVFPVTRKQNNDITTLASNGGKVHCMQVW 61 Query: 152 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 331 PV K FET SYLPPLS+E +A +VDY++ GW+PCLEF E + +V E+ G Sbjct: 62 PPVGKKKFETLSYLPPLSEESLAKEVDYLLRMGWVPCLEF-ELEHGFVYRENHRSPG--- 117 Query: 332 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD R WTMWKLPMFGC D QVL+E+ KA+P++++R+ Sbjct: 118 --YYDGRCWTMWKLPMFGCTDSSQVLKELEEAKKAYPNSFIRI 158 [133][TOP] >UniRef100_P10797 Ribulose bisphosphate carboxylase small chain 2B, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=RBS2B_ARATH Length = 181 Score = 124 bits (310), Expect = 4e-27 Identities = 67/157 (42%), Positives = 91/157 (57%), Gaps = 13/157 (8%) Frame = +2 Query: 29 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 169 S +A V PA+++ V P LK + + PV A + + M VW P+ K Sbjct: 7 SSTAVVTSPAQATMVAPFTGLKSSA-SFPVTRKANNDITSITSNGGRVSCMKVWPPIGKK 65 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 FET SYLP LSD ++A +VDY++ N WIPC+EF E + +V E G YYD Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG-----YYDG 119 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLP+FGC D QVL+E+ C K +P A++R+ Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRI 156 [134][TOP] >UniRef100_Q9AUJ3 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Flaveria palmeri RepID=Q9AUJ3_FLAPA Length = 131 Score = 123 bits (309), Expect = 6e-27 Identities = 55/107 (51%), Positives = 73/107 (68%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW PV K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A Sbjct: 9 MKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLIRNKWVPCLEF-ELEHGFVYRENASSP 67 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPMFGC D QV++E+ C K +P A++R+ Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRI 109 [135][TOP] >UniRef100_Q9AQX3 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Flaveria palmeri RepID=Q9AQX3_FLAPA Length = 131 Score = 123 bits (309), Expect = 6e-27 Identities = 55/107 (51%), Positives = 73/107 (68%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW PV K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A Sbjct: 9 MKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLIRNKWVPCLEF-ELEHGFVYRENASSP 67 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPMFGC D QV++E+ C K +P A++R+ Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRI 109 [136][TOP] >UniRef100_Q84QE5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nicotiana tabacum RepID=Q84QE5_TOBAC Length = 180 Score = 123 bits (309), Expect = 6e-27 Identities = 63/163 (38%), Positives = 95/163 (58%), Gaps = 12/163 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQMMVW 151 ++V++ ++V+ + V P LK A + PV+ + M VW Sbjct: 3 SSVLSSAAVATRTNVAQANMVAPFTGLKSAA-SFPVSRKQNLDITSIASNGGRVQCMQVW 61 Query: 152 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 331 P K +ET SYLP LS+EQ+ ++++Y++ NGW+PCLEF E+++ +V E+ G Sbjct: 62 PPYGKKKYETLSYLPDLSEEQLLSEIEYLLKNGWVPCLEF-ETERGFVYRENNKSPG--- 117 Query: 332 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL E+ KA+P+A++R+ Sbjct: 118 --YYDGRYWTMWKLPMFGCTDATQVLAEVGEAKKAYPEAWIRI 158 [137][TOP] >UniRef100_A7LIT5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Corchorus olitorius RepID=A7LIT5_9ROSI Length = 183 Score = 123 bits (309), Expect = 6e-27 Identities = 70/165 (42%), Positives = 92/165 (55%), Gaps = 13/165 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP------------AQANQMM 145 MA+ + S+ A PA+++ V P LK A A P + M Sbjct: 1 MASAMMSSATVVNRASPAQATLVAPFTGLKSA-SAFPTTRKNNRDITSIASNGGRVQCMQ 59 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P+ K FET SYLP L+ Q+A +VDY++ +GWIPCLEF E + +V E G Sbjct: 60 VWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSGWIPCLEF-ELEHGFVYREHHHSPG- 117 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL+E+ KA+PDA++R+ Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPDAFIRI 158 [138][TOP] >UniRef100_A4SA21 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4SA21_OSTLU Length = 134 Score = 123 bits (309), Expect = 6e-27 Identities = 53/99 (53%), Positives = 70/99 (70%), Gaps = 1/99 (1%) Frame = +2 Query: 167 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG-SVSCLYY 343 +MFETFS+LPPLSD +I+ QV Y++ NGW PC+EF +S AY S++ YY Sbjct: 2 RMFETFSFLPPLSDAEISKQVQYLLNNGWTPCIEFEDSAHAYTDGHGWANMDTSINAGYY 61 Query: 344 DNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 DNRYW MWKLPM+GC++P +V+ EI C K FP+ YVR+ Sbjct: 62 DNRYWVMWKLPMYGCQNPDEVIAEINTCIKCFPECYVRV 100 [139][TOP] >UniRef100_Q40250 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Lactuca sativa RepID=RBS_LACSA Length = 181 Score = 123 bits (309), Expect = 6e-27 Identities = 55/107 (51%), Positives = 73/107 (68%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW P+ K +ET SYLPPLSDE ++ ++DY++ N WIPCLEF E + +V E Sbjct: 58 MKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEF-ELEHGFVYREHHHSP 116 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPMFGC D QV++E+ C K +P+A++R+ Sbjct: 117 G-----YYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRV 158 [140][TOP] >UniRef100_P10798 Ribulose bisphosphate carboxylase small chain 3B, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=RBS3B_ARATH Length = 181 Score = 123 bits (309), Expect = 6e-27 Identities = 67/157 (42%), Positives = 90/157 (57%), Gaps = 13/157 (8%) Frame = +2 Query: 29 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 169 S +A V PA+++ V P LK + A PV + + M VW P+ K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKK 65 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 FET SYLP LSD ++A +VDY++ N WIPC+EF E + +V E G YYD Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG-----YYDG 119 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLP+FGC D QVL+E+ C K +P A++R+ Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRI 156 [141][TOP] >UniRef100_Q9XGX5 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Amaranthus hypochondriacus RepID=RBS2_AMAHP Length = 184 Score = 123 bits (309), Expect = 6e-27 Identities = 58/107 (54%), Positives = 71/107 (66%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW PV K FET SYLPPLSD Q+ AQV Y++ GWIPC+EF E + +V E+ Sbjct: 61 MQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEF-ELEHPFVYRENHRSP 119 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G Y D RYWTMWKLPM+GC DP QVL E+ KA+P A++R+ Sbjct: 120 G-----YQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPTAFIRI 161 [142][TOP] >UniRef100_Q84NG5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Flaveria bidentis RepID=Q84NG5_FLABI Length = 173 Score = 123 bits (308), Expect = 7e-27 Identities = 67/157 (42%), Positives = 93/157 (59%), Gaps = 12/157 (7%) Frame = +2 Query: 26 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAA--------PAQANQ---MMVWTPVNNK 169 +S+ A A A+++ V P LK A A PV P+ + M VW PV K Sbjct: 2 ASIPATFATVAQANMVAPFTGLK-ANAAFPVTKKVNGFSTLPSNGGRVQCMKVWPPVGKK 60 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 +ET SYLP L++ Q+A ++DY++ N W+PCLEF E + +V E+A G YYD Sbjct: 61 KYETLSYLPELTEAQLAKEIDYLIRNKWVPCLEF-ELEHGFVYRENARSPG-----YYDG 114 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLPMFGC D QV++E+ C K +P A++R+ Sbjct: 115 RYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRI 151 [143][TOP] >UniRef100_A9TWX2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TWX2_PHYPA Length = 182 Score = 123 bits (308), Expect = 7e-27 Identities = 74/168 (44%), Positives = 92/168 (54%), Gaps = 16/168 (9%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS---------VRPMAALK-------PAVKAAPVAAPAQAN 136 MA+ +A S+V A A SS V+ LK + K + V ++ Sbjct: 1 MASTVACSTVVAPAVFAAASSSVASSDSVTVKASTCLKGPTFFASKSQKLSSVQNGSRVQ 60 Query: 137 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 316 M VW P+ FETFSYLPPLSDE IA QV+Y++ IPCLEF + K VS ++ Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDEAIAKQVEYMIQQKLIPCLEFDLNSKG-VSRDNNSS 119 Query: 317 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPMFGC D QVLREI C FP+ +VR+ Sbjct: 120 PG-----YYDGRYWTMWKLPMFGCNDSAQVLREIQECKTTFPNCWVRV 162 [144][TOP] >UniRef100_Q39745 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS3_FLAPR Length = 173 Score = 123 bits (308), Expect = 7e-27 Identities = 66/156 (42%), Positives = 92/156 (58%), Gaps = 11/156 (7%) Frame = +2 Query: 26 SSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTPVNNKM 172 +S+ A VA A+++ V P LK P K + +N M VW P+ K Sbjct: 2 ASIPATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKR 61 Query: 173 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 352 +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD R Sbjct: 62 YETLSYLPNLTESQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYDGR 115 Query: 353 YWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YWTMWKLPMFGC D QV++E+ C K +P A++R+ Sbjct: 116 YWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRI 151 [145][TOP] >UniRef100_Q39743 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS1_FLAPR Length = 173 Score = 123 bits (308), Expect = 7e-27 Identities = 68/157 (43%), Positives = 94/157 (59%), Gaps = 12/157 (7%) Frame = +2 Query: 26 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAA--------PAQANQ---MMVWTPVNNK 169 +S+ A VA A+++ V P LK A A PV P+ + M VW P+ K Sbjct: 2 ASIPATVATVAQANMVAPFTGLK-ANAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKK 60 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD Sbjct: 61 KYETLSYLPDLTEVQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYDG 114 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLPMFGC D QV++E+ C K +P A++R+ Sbjct: 115 RYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRI 151 [146][TOP] >UniRef100_C1JZ18 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Ageratina adenophora RepID=C1JZ18_9ASTR Length = 178 Score = 122 bits (307), Expect = 9e-27 Identities = 69/161 (42%), Positives = 94/161 (58%), Gaps = 11/161 (6%) Frame = +2 Query: 11 AVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTP 157 A I+ S + + A PA+++ V P LK PA K A + N M VW P Sbjct: 2 ASISSSVATVSRAAPAQANMVAPFTGLKSNAAFPATKKANDFSTLPNNGGRVQCMKVWPP 61 Query: 158 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 337 + K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E A G Sbjct: 62 LGLKKYETLSYLPTLTETQLAKEVDYLLRNKWVPCLEF-ELEHGFVYREHARSPG----- 115 Query: 338 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD R+WTMWKLPMFGC D QVL+E+ C K +P A++R+ Sbjct: 116 YYDGRHWTMWKLPMFGCTDSAQVLKEVGECKKEYPQAWIRI 156 [147][TOP] >UniRef100_B7ZYT6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Zea mays RepID=B7ZYT6_MAIZE Length = 153 Score = 122 bits (307), Expect = 9e-27 Identities = 57/108 (52%), Positives = 69/108 (63%) Frame = +2 Query: 137 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 316 +M VW NK FET SYLPPLS + + QVDY++ NGWIPCLEF++ Y N Sbjct: 30 RMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFSKLGFVYREN----- 84 Query: 317 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 S S YYD RYWTMWKLPMFGC D QV +E+ A+PDA+ R+ Sbjct: 85 --STSPCYYDGRYWTMWKLPMFGCTDATQVYKELQEAIAAYPDAFHRV 130 [148][TOP] >UniRef100_O22573 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Fritillaria agrestis RepID=RBS3_FRIAG Length = 179 Score = 122 bits (307), Expect = 9e-27 Identities = 69/163 (42%), Positives = 91/163 (55%), Gaps = 12/163 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA-----------QANQMMVW 151 +A + S +AA A PA++S V P LK A PA + M VW Sbjct: 4 SATMLSSVATAARAAPAQASMVAPFVGLKSASAFPVTQKPATGLSTLPSNGGRVQCMKVW 63 Query: 152 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 331 V K FET SYLP LS E + Q++Y++ NGW+PCLEF S + +VS ++ G Sbjct: 64 PIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEF--SLEGFVSRDNNKSPG--- 118 Query: 332 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QV++E C K +P A++R+ Sbjct: 119 --YYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRV 159 [149][TOP] >UniRef100_P10796 Ribulose bisphosphate carboxylase small chain 1B, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=RBS1B_ARATH Length = 181 Score = 122 bits (307), Expect = 9e-27 Identities = 66/157 (42%), Positives = 91/157 (57%), Gaps = 13/157 (8%) Frame = +2 Query: 29 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 169 S +A V PA+++ V P LK + + PV A + + M VW P+ K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-SFPVTRKANNDITSITSNGGRVSCMKVWPPIGKK 65 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 FET SYLP L+D ++A +VDY++ N WIPC+EF E + +V E G YYD Sbjct: 66 KFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG-----YYDG 119 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLP+FGC D QVL+E+ C K +P A++R+ Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRI 156 [150][TOP] >UniRef100_Q02980 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Malus sp. RepID=RBS_MALSP Length = 183 Score = 122 bits (306), Expect = 1e-26 Identities = 70/168 (41%), Positives = 94/168 (55%), Gaps = 16/168 (9%) Frame = +2 Query: 5 MAAVIAKSSVSAAVA--RPARSSVR---PMAALKPAVKAAPVAAPA-----------QAN 136 MA+ + S A V+ RPA + R P LK + A+PV + + Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFTGLKSS-SASPVTRKSNDITSIASNGGRVQ 59 Query: 137 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 316 M VW P+ K FET SYLPPLS E +A +VDY++ W+PCLEF E + +V E+ Sbjct: 60 CMQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEF-ELEHGFVYRENHRS 118 Query: 317 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPMFGC D QVL+E+ KA+P +++R+ Sbjct: 119 PG-----YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRI 161 [151][TOP] >UniRef100_Q39749 Ribulose bisphosphate carboxylase small chain 7, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS7_FLAPR Length = 173 Score = 122 bits (306), Expect = 1e-26 Identities = 66/156 (42%), Positives = 92/156 (58%), Gaps = 11/156 (7%) Frame = +2 Query: 26 SSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTPVNNKM 172 +S+ A VA A+++ V P LK P K + +N M VW P+ K Sbjct: 2 ASIPATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLASNGGRVQCMKVWPPLGKKR 61 Query: 173 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 352 +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD R Sbjct: 62 YETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYDGR 115 Query: 353 YWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YWTMWKLPMFGC D QV++E+ C K +P A++R+ Sbjct: 116 YWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRI 151 [152][TOP] >UniRef100_Q39747 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS5_FLAPR Length = 173 Score = 122 bits (306), Expect = 1e-26 Identities = 66/156 (42%), Positives = 92/156 (58%), Gaps = 11/156 (7%) Frame = +2 Query: 26 SSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTPVNNKM 172 +S+ A VA A+++ V P LK P K + +N M VW P+ K Sbjct: 2 ASIPATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKR 61 Query: 173 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 352 +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD R Sbjct: 62 YETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYDGR 115 Query: 353 YWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YWTMWKLPMFGC D QV++E+ C K +P A++R+ Sbjct: 116 YWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRI 151 [153][TOP] >UniRef100_Q5I8Y4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ammopiptanthus mongolicus RepID=Q5I8Y4_9FABA Length = 174 Score = 122 bits (305), Expect = 2e-26 Identities = 55/107 (51%), Positives = 72/107 (67%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M+VW P+ K FET SYLPPLS E + +V+Y++ GW+PCLEF E + +V E+ Sbjct: 50 MLVWPPLGRKKFETLSYLPPLSIESLTKEVEYLLRKGWVPCLEF-ELEHGFVYRENNRSP 108 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPMFGC D QV++E+ C K +P A+VR+ Sbjct: 109 G-----YYDGRYWTMWKLPMFGCSDASQVMKELEECKKEYPTAFVRI 150 [154][TOP] >UniRef100_P17673 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Trifolium repens RepID=RBS_TRIRP Length = 178 Score = 122 bits (305), Expect = 2e-26 Identities = 53/112 (47%), Positives = 75/112 (66%) Frame = +2 Query: 125 AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNE 304 ++ N M VW PV K FET SYLPPL+DEQ+ +V+Y++ GW+PC+EF E +K +V + Sbjct: 51 SRVNCMQVWPPVGKKKFETLSYLPPLTDEQLLKEVEYLLRKGWVPCVEF-ELEKGFVHRQ 109 Query: 305 SAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMW+LP+FG D QVL+E+ C +P+A++R+ Sbjct: 110 YNSSPG-----YYDGRYWTMWRLPLFGTTDAAQVLKEVAECKAEYPEAFIRI 156 [155][TOP] >UniRef100_P19312 Ribulose bisphosphate carboxylase small chain SSU5B, chloroplastic n=1 Tax=Lemna gibba RepID=RBS6_LEMGI Length = 177 Score = 122 bits (305), Expect = 2e-26 Identities = 67/165 (40%), Positives = 93/165 (56%), Gaps = 13/165 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMM 145 MA+ + S+ + A PA+++ V P L+ +V A P A + + M Sbjct: 1 MASSMMASTAAVARVGPAQTNMVAPFNGLRSSV-AFPATRKANNDLSTLPSNGGRVSCMQ 59 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + Sbjct: 60 VWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA------ 113 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 S YYD RYWTMWKLPMFGC D QV+ E+ KA+P+ +VR+ Sbjct: 114 -SPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRI 157 [156][TOP] >UniRef100_Q96360 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Betula pendula RepID=Q96360_BETVE Length = 110 Score = 121 bits (304), Expect = 2e-26 Identities = 58/107 (54%), Positives = 71/107 (66%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW P+ K FET SYLPPLS EQ+A +VDY++ IPCLEF E + +V E Sbjct: 4 MQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEF-ELEHGFVYREHNRSP 62 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPMFGC D QVL+E+ C KA+P A++R+ Sbjct: 63 G-----YYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRI 104 [157][TOP] >UniRef100_Q8GRJ7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Coffea arabica RepID=Q8GRJ7_COFAR Length = 181 Score = 121 bits (304), Expect = 2e-26 Identities = 69/165 (41%), Positives = 95/165 (57%), Gaps = 13/165 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVAR--PARSS-VRPMAALKPAV------KAAPVAAPA----QANQMM 145 MA+ + S+ A R PA++S V P LK A K+ + + A + M Sbjct: 1 MASSMISSAAVATTTRASPAQASMVAPFNGLKAASSFPISKKSVDITSLATNGGRVQCMQ 60 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P K +ET SYLP L+DEQ+ ++DY++ +GW+PCLEF E +K +V E G Sbjct: 61 VWPPRGLKKYETLSYLPDLTDEQLLKEIDYLIRSGWVPCLEF-ELEKGFVYREYHRSPG- 118 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPM+GC D QVL E+ C K +P+ +VR+ Sbjct: 119 ----YYDGRYWTMWKLPMYGCTDATQVLNEVGECLKEYPNCWVRI 159 [158][TOP] >UniRef100_P24007 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pyrus pyrifolia RepID=RBS_PYRPY Length = 183 Score = 121 bits (304), Expect = 2e-26 Identities = 66/167 (39%), Positives = 91/167 (54%), Gaps = 15/167 (8%) Frame = +2 Query: 5 MAAVIAKSSVSAAVA--RPARSSVRPMAALKPAVKAAPVAAPAQANQ------------- 139 MA+ + S A V+ RPA + R +A ++ ++N Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFNGLKSSSAFPVTRKSNDITSIASNGGRVQC 60 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW P+ K FET SYLPPLS E +A +VDY++ W+PCLEF E + +V E+ Sbjct: 61 MQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEF-ELETGFVYRENHRSP 119 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPMFGC D QVL+E+ KA+P +++R+ Sbjct: 120 G-----YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRI 161 [159][TOP] >UniRef100_Q39748 Ribulose bisphosphate carboxylase small chain 6, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS6_FLAPR Length = 173 Score = 121 bits (304), Expect = 2e-26 Identities = 67/157 (42%), Positives = 94/157 (59%), Gaps = 12/157 (7%) Frame = +2 Query: 26 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAA--------PAQANQ---MMVWTPVNNK 169 +S+ A VA A+++ V P LK A A PV P+ + M VW P+ K Sbjct: 2 ASIPATVAAVAQANMVAPFTGLK-ANAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKK 60 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 + T SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD Sbjct: 61 KYXTLSYLPNLTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYDG 114 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLPMFGC D +QV++E+ C K +P A++R+ Sbjct: 115 RYWTMWKLPMFGCTDSVQVMKELQECKKEYPQAWIRI 151 [160][TOP] >UniRef100_P04714 Ribulose bisphosphate carboxylase small chain SSU8, chloroplastic n=1 Tax=Petunia x hybrida RepID=RBS1_PETHY Length = 180 Score = 121 bits (304), Expect = 2e-26 Identities = 65/163 (39%), Positives = 93/163 (57%), Gaps = 12/163 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQMMVW 151 ++VI+ ++V+ S V P LK AV + PV++ + M VW Sbjct: 3 SSVISSAAVATRTNVAQASMVAPFNGLKSAV-SFPVSSKQNLDITSIASNGGRVQCMQVW 61 Query: 152 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 331 P K +ET SYLP L+DEQ+ +++Y++ GW+PCLEF E++ +V E S Sbjct: 62 PPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEF-ETEHGFVYREY-----HAS 115 Query: 332 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL E+ KA+P+A++R+ Sbjct: 116 PRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRI 158 [161][TOP] >UniRef100_Q9AUJ5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Flaveria ramosissima RepID=Q9AUJ5_FLARA Length = 131 Score = 121 bits (303), Expect = 3e-26 Identities = 54/107 (50%), Positives = 73/107 (68%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW P+ K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A Sbjct: 9 MKVWPPLGKKKYETLSYLPDLTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSP 67 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPMFGC D QV++E+ C K +P A++R+ Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRI 109 [162][TOP] >UniRef100_Q9AUJ2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Flaveria palmeri RepID=Q9AUJ2_FLAPA Length = 131 Score = 121 bits (303), Expect = 3e-26 Identities = 55/107 (51%), Positives = 72/107 (67%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW PV K +ET SYLP L++ Q+A +VDY+ N W+PCLEF E + +V E+A Sbjct: 9 MKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLHRNKWVPCLEF-ELEHGFVYRENASSP 67 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPMFGC D QV++E+ C K +P A++R+ Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRI 109 [163][TOP] >UniRef100_Q5ZF94 Ribulose bisphosphate carboxylase small chain n=1 Tax=Plantago major RepID=Q5ZF94_PLAMJ Length = 174 Score = 121 bits (303), Expect = 3e-26 Identities = 66/151 (43%), Positives = 88/151 (58%), Gaps = 9/151 (5%) Frame = +2 Query: 35 SAAVARPARSSVRPMAALK------PAVKAAPVAAPAQANQ---MMVWTPVNNKMFETFS 187 SAA S V + LK A K V++P+ + M VW P K +ET S Sbjct: 8 SAATVTAQTSMVGQFSGLKFGSTFPIAKKTGRVSSPSSGLKVRCMQVWPPTGKKKYETLS 67 Query: 188 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 367 YLP L+ EQ+A ++DY++ + WIPCLEF E + +V E+A G YYD RYWTMW Sbjct: 68 YLPDLTVEQLAKEIDYLLRSKWIPCLEF-ELEHGFVYRENARSPG-----YYDGRYWTMW 121 Query: 368 KLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 KLPMFGC D QV+ E+ C K +P+A+VR+ Sbjct: 122 KLPMFGCTDASQVIAELEECKKEYPNAWVRI 152 [164][TOP] >UniRef100_Q107A2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=Q107A2_MUSAC Length = 161 Score = 121 bits (303), Expect = 3e-26 Identities = 67/164 (40%), Positives = 94/164 (57%), Gaps = 13/164 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 148 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPGNGGRVQCMKV 59 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVGRENHRSPG-- 115 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D +QV++E+ C K +P A++R+ Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEECKKEYPKAFIRI 156 [165][TOP] >UniRef100_Q107A1 Ribulose bisphosphate carboxylase small chain (Fragment) n=3 Tax=Eumusa RepID=Q107A1_MUSAC Length = 161 Score = 121 bits (303), Expect = 3e-26 Identities = 67/164 (40%), Positives = 94/164 (57%), Gaps = 13/164 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 148 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPGNGGRVQCMKV 59 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVGRENHRSPG-- 115 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D +QV++E+ C K +P A++R+ Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEECKKEYPKAFIRI 156 [166][TOP] >UniRef100_Q106Z6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=Q106Z6_MUSAC Length = 161 Score = 121 bits (303), Expect = 3e-26 Identities = 67/164 (40%), Positives = 94/164 (57%), Gaps = 13/164 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 148 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPSNGGRVQCMKV 59 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVGRENHRSPG-- 115 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D +QV++E+ C K +P A++R+ Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEECKKEYPKAFIRI 156 [167][TOP] >UniRef100_Q106Z4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Musa acuminata RepID=Q106Z4_MUSAC Length = 180 Score = 121 bits (303), Expect = 3e-26 Identities = 67/164 (40%), Positives = 94/164 (57%), Gaps = 13/164 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 148 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 3 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPSNGGRVQCMKV 61 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 62 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVGRENHRSPG-- 117 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D +QV++E+ C K +P A++R+ Sbjct: 118 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEECKKEYPKAFIRI 158 [168][TOP] >UniRef100_P08135 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Raphanus sativus RepID=RBS_RAPSA Length = 181 Score = 121 bits (303), Expect = 3e-26 Identities = 62/146 (42%), Positives = 83/146 (56%) Frame = +2 Query: 23 KSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPL 202 KSS + V R + + +A+ V M VW P+ K FET SYLP L Sbjct: 28 KSSAAFPVTRKTNTDITSIASNGGRVSC-----------MKVWPPIGKKKFETLSYLPDL 76 Query: 203 SDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMF 382 SD ++A +VDY++ N WIPC+EF E + +V E G YYD RYWTMWKLP+F Sbjct: 77 SDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDGRYWTMWKLPLF 130 Query: 383 GCRDPMQVLREIVACTKAFPDAYVRL 460 GC D QVL+E+ C K +P+A +R+ Sbjct: 131 GCTDSAQVLKEVQECKKEYPNALIRI 156 [169][TOP] >UniRef100_O22572 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Fritillaria agrestis RepID=RBS2_FRIAG Length = 179 Score = 121 bits (303), Expect = 3e-26 Identities = 70/164 (42%), Positives = 93/164 (56%), Gaps = 13/164 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAA---------PAQANQ---MMV 148 +A + S +AA PA++S V P LK A A PV P+ + M V Sbjct: 4 SATMLSSVATAACVAPAQASMVAPFVGLKSA-SAFPVTQKTVTGLSTLPSNGGRVQCMKV 62 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W V K FET SYLP LS E + Q++Y++ NGW+PCLEF S + +VS ++ G Sbjct: 63 WPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEF--SLEGFVSRDNNKSPG-- 118 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QV++E C K +P A++R+ Sbjct: 119 ---YYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRV 159 [170][TOP] >UniRef100_Q106Y3 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa acuminata RepID=Q106Y3_MUSAC Length = 161 Score = 120 bits (302), Expect = 4e-26 Identities = 67/164 (40%), Positives = 94/164 (57%), Gaps = 13/164 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 148 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPSNGGRVQCMEV 59 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVGRENHRSPG-- 115 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D +QV++E+ C K +P A++R+ Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEECKKEYPKAFIRI 156 [171][TOP] >UniRef100_B7FMC2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Medicago truncatula RepID=B7FMC2_MEDTR Length = 181 Score = 120 bits (302), Expect = 4e-26 Identities = 67/165 (40%), Positives = 93/165 (56%), Gaps = 13/165 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPAR---SSVRPMAALK-----PAVKA-----APVAAPAQANQMM 145 MA+ + SS V R + +V P LK P K + + + N M Sbjct: 1 MASSMISSSAMTTVNRASSVQSGAVAPFVGLKSMAGFPVTKVNKDITSITSNGGRVNCMQ 60 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P+ K FET SYLPPL+ EQ+A +V+Y++ GW+ CLEF E++K +V E+ G Sbjct: 61 VWPPIGKKKFETLSYLPPLTREQLAKEVEYLIRKGWVACLEF-ETEKGFVYRENHSSPG- 118 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLP+FG D QVL+E+ A+P+A+VR+ Sbjct: 119 ----YYDGRYWTMWKLPLFGATDASQVLKELDEVVVAYPNAFVRI 159 [172][TOP] >UniRef100_Q40004 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Hordeum vulgare RepID=RBS_HORVU Length = 174 Score = 120 bits (302), Expect = 4e-26 Identities = 63/149 (42%), Positives = 85/149 (57%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ S A + +S+ + + +A V+ + M VW K FET SYL Sbjct: 5 VMASSATSVAPFQGLKSTAGLPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYL 64 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS E + QVDY++ + W+PCLEF++ + R + S YYD RYWTMWKL Sbjct: 65 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMWKL 117 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QVL E+ K +PDAYVR+ Sbjct: 118 PMFGCTDATQVLNEVEEVKKEYPDAYVRI 146 [173][TOP] >UniRef100_O24634 Ribulose bisphosphate carboxylase small chain 1/4, chloroplastic n=1 Tax=Fritillaria agrestis RepID=RBS1_FRIAG Length = 179 Score = 120 bits (302), Expect = 4e-26 Identities = 67/163 (41%), Positives = 90/163 (55%), Gaps = 12/163 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA-----------QANQMMVW 151 ++ + S +AA A PA++S V P LK PA + M VW Sbjct: 4 SSTMLSSVATAACAAPAQASMVAPFVGLKSTSAFPVTQKPATGLSTLPSNGGRVQCMKVW 63 Query: 152 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 331 V K FET SYLP LS E + Q++Y++ NGW+PCLEF S + +VS ++ G Sbjct: 64 PIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEF--SLEGFVSRDNNKSPG--- 118 Query: 332 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QV++E C K +P A++R+ Sbjct: 119 --YYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRV 159 [174][TOP] >UniRef100_Q9SDY9 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena clauda RepID=Q9SDY9_9POAL Length = 168 Score = 120 bits (301), Expect = 5e-26 Identities = 61/149 (40%), Positives = 85/149 (57%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ S A + +S+ + + A V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSASSLGSVSNGGRIRCMQVWPTEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QV++E+ K +PDAYVR+ Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRI 142 [175][TOP] >UniRef100_Q9FRZ5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum aestivum RepID=Q9FRZ5_WHEAT Length = 175 Score = 120 bits (301), Expect = 5e-26 Identities = 63/151 (41%), Positives = 86/151 (56%), Gaps = 1/151 (0%) Frame = +2 Query: 11 AVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFS 187 AV+A S+ S A + +S+ P++ V+ + +M VW K FET S Sbjct: 4 AVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRRMQVWPIEGIKKFETLS 63 Query: 188 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 367 YLPPLS E + QVDY++ + W+PCLEF++ + R + S YYD RYWTMW Sbjct: 64 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMW 116 Query: 368 KLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 KLPMFGC D QV+ E+ K +PDAYVR+ Sbjct: 117 KLPMFGCTDATQVINEVEEVKKEYPDAYVRI 147 [176][TOP] >UniRef100_Q9FRZ2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum aestivum RepID=Q9FRZ2_WHEAT Length = 175 Score = 120 bits (301), Expect = 5e-26 Identities = 64/151 (42%), Positives = 87/151 (57%), Gaps = 1/151 (0%) Frame = +2 Query: 11 AVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFS 187 AV+A S+ S A + +S+ P++ + + V+ + M VW K FET S Sbjct: 4 AVMASSATSVAPFQGLKSTAGLPVSRRSSSAGLSSVSNGGRIRCMQVWPIEGIKKFETLS 63 Query: 188 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 367 YLPPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMW Sbjct: 64 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMW 116 Query: 368 KLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 KLPMFGC D QVL E+ K +PDAYVR+ Sbjct: 117 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRV 147 [177][TOP] >UniRef100_Q8VX71 Ribulose bisphosphate carboxylase small chain n=1 Tax=Rumex obtusifolius RepID=Q8VX71_RUMOB Length = 181 Score = 120 bits (301), Expect = 5e-26 Identities = 61/154 (39%), Positives = 88/154 (57%), Gaps = 3/154 (1%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ---MMVWTPVNNKMFE 178 +A +A+ S + A + ++ +A K++ ++ P+ + M VW P FE Sbjct: 8 SATVARPSAAQATVIAPFTGLKNIATFPTTRKSSDLSFPSNGGKVRCMQVWPPEGKIKFE 67 Query: 179 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 358 T SYLPPLS+ + AQ++Y++ NGW+PCLEF V + R S YYD RYW Sbjct: 68 TLSYLPPLSEADLLAQINYLLINGWVPCLEFD------VGPGAVYREHHHSPGYYDGRYW 121 Query: 359 TMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 TMWKLPMFGC D QV+ E+ KA+P A+VR+ Sbjct: 122 TMWKLPMFGCTDATQVVAELEEAKKAYPHAFVRI 155 [178][TOP] >UniRef100_Q106Y4 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa acuminata RepID=Q106Y4_MUSAC Length = 161 Score = 120 bits (301), Expect = 5e-26 Identities = 68/164 (41%), Positives = 94/164 (57%), Gaps = 13/164 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 148 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPGNGGRVQCMKV 59 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVWRENHRSPG-- 115 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D +QV++E+ C K +P A+VR+ Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEECKKEYPKAFVRI 156 [179][TOP] >UniRef100_B3H5S2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Arabidopsis thaliana RepID=B3H5S2_ARATH Length = 186 Score = 120 bits (301), Expect = 5e-26 Identities = 65/157 (41%), Positives = 89/157 (56%), Gaps = 13/157 (8%) Frame = +2 Query: 29 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 169 S +A V PA+++ V P LK + A PV + + M VW P+ K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKK 65 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 FET SYLP LSD ++A +VDY++ N WIPC+EF E + + R + YYD Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEF-ELEVINTKHGFVYREHGNTPGYYDG 124 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLP+FGC D QVL+E+ C K +P A++R+ Sbjct: 125 RYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRI 161 [180][TOP] >UniRef100_A9U380 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U380_PHYPA Length = 156 Score = 120 bits (301), Expect = 5e-26 Identities = 68/145 (46%), Positives = 85/145 (58%), Gaps = 7/145 (4%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALKPAV-------KAAPVAAPAQANQMMVWTPVN 163 ++ +A SSV+A+ SSV+ + LK A + + V ++ M VW P+ Sbjct: 17 VSVTVASSSVAAS---RESSSVKAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIG 73 Query: 164 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 343 FETFSYLPPLSD+QIA QVDY++ IPC+EF +N S GS S YY Sbjct: 74 QPKFETFSYLPPLSDDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFS----GSGSSGYY 129 Query: 344 DNRYWTMWKLPMFGCRDPMQVLREI 418 D RYWTMWKLPMFGC D QVLREI Sbjct: 130 DGRYWTMWKLPMFGCTDSSQVLREI 154 [181][TOP] >UniRef100_O64416 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Marchantia paleacea RepID=RBS_MARPA Length = 180 Score = 120 bits (301), Expect = 5e-26 Identities = 66/158 (41%), Positives = 83/158 (52%), Gaps = 8/158 (5%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSSVRPMAALKPAV-------KAAPVAAPAQANQMMVWTPVNN 166 AAV+ + SAA + V A LK V + ++ + M VW P NN Sbjct: 8 AAVVTPFAASAASTTKSSQIVSVQAGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNN 67 Query: 167 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 346 FET SYLPPLS + +A Q+DY++ +GW PC+EF + R GS YYD Sbjct: 68 LKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQG-------TVTREGSTMPGYYD 120 Query: 347 NRYWTMWKLPMFGCRDPMQVLREIVACTKAF-PDAYVR 457 RYWTMWKLPMFGC D VLREI C K + Y+R Sbjct: 121 GRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIR 158 [182][TOP] >UniRef100_P12468 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Glycine max RepID=RBS4_SOYBN Length = 178 Score = 120 bits (301), Expect = 5e-26 Identities = 67/162 (41%), Positives = 84/162 (51%), Gaps = 10/162 (6%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 154 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGLPTRKTNNDITSIASNGGRVQCMQVWP 60 Query: 155 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 334 PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSLG---- 115 Query: 335 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL+E+ A+P+ ++R+ Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRI 156 [183][TOP] >UniRef100_P04715 Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic n=1 Tax=Petunia x hybrida RepID=RBS2_PETHY Length = 180 Score = 120 bits (301), Expect = 5e-26 Identities = 63/163 (38%), Positives = 92/163 (56%), Gaps = 12/163 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQMMVW 151 ++V++ ++V+ + S V P LK A + PV+ + M VW Sbjct: 3 SSVMSSAAVATSTNAAQASMVAPFTGLKSAA-SFPVSRKQNLDITSIASNGGRVQCMQVW 61 Query: 152 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 331 P K +ET SYLP L+DEQ+ +++Y++ GW+PCLEF E++ +V E S Sbjct: 62 PPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEF-ETEHGFVYREY-----HAS 115 Query: 332 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL E+ KA+P+A++R+ Sbjct: 116 PRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRI 158 [184][TOP] >UniRef100_Q8W2C5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Larrea tridentata RepID=Q8W2C5_LARTR Length = 107 Score = 120 bits (300), Expect = 6e-26 Identities = 55/107 (51%), Positives = 71/107 (66%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW P K ET SYLPPLS E +A +++Y + GWIPCLEF+ + +V E++ Sbjct: 2 MKVWPPRGKKKLETLSYLPPLSIESLAKEIEYFIRKGWIPCLEFS-IESGFVYRETSRMP 60 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPMFGC D +QVL E+ KA+PDA++R+ Sbjct: 61 G-----YYDGRYWTMWKLPMFGCTDAVQVLNELEEAKKAYPDAFIRI 102 [185][TOP] >UniRef100_Q6A159 Ribulose bisphosphate carboxylase small chain n=1 Tax=Limonium gibertii RepID=Q6A159_9CARY Length = 154 Score = 120 bits (300), Expect = 6e-26 Identities = 55/107 (51%), Positives = 71/107 (66%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW P K FET SYLPPL E +A ++ Y++ GW+PCLEF E +AY+ E Sbjct: 33 MQVWPPEGLKKFETLSYLPPLDREGLANEISYLMRMGWVPCLEF-EVGEAYIHREYHNLP 91 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPM+GC DP QVL+E+ C+K +P A++R+ Sbjct: 92 G-----YYDGRYWTMWKLPMYGCTDPAQVLKEVDECSKLYPHAHIRI 133 [186][TOP] >UniRef100_Q306K0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica napus RepID=Q306K0_BRANA Length = 181 Score = 120 bits (300), Expect = 6e-26 Identities = 65/157 (41%), Positives = 90/157 (57%), Gaps = 13/157 (8%) Frame = +2 Query: 29 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 169 S +A V PA+++ V P LK + A PV A + + M VW PV K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKANNDITSIASNGGRVSCMKVWPPVGKK 65 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 FET SYLP L++ ++ +VDY++ N WIPC+EF E + +V E G YYD Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDG 119 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLP+FGC D QVL+E+ C +P+A++R+ Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRI 156 [187][TOP] >UniRef100_P31333 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Gossypium hirsutum RepID=RBS_GOSHI Length = 182 Score = 120 bits (300), Expect = 6e-26 Identities = 70/167 (41%), Positives = 97/167 (58%), Gaps = 15/167 (8%) Frame = +2 Query: 5 MAAVIAKSSVSAAV--ARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQ 139 MA+ + S+ A V + PA+++ V P LK A A PV A + Sbjct: 1 MASSMISSATIATVNCSSPAQANMVAPFTGLKSA-SAFPVTRKANNDITSLASNGGRVQC 59 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW P+ K FET SYLP L+ Q+A +VDY++ + WIPCLEF E ++ +V ++ Sbjct: 60 MQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEF-ELEEGFVHR----KY 114 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 S+ YYD RYWTMWKLPMFGC D QVL E+ C K +P+A++R+ Sbjct: 115 SSLPT-YYDGRYWTMWKLPMFGCTDSAQVLEELENCKKEYPNAFIRI 160 [188][TOP] >UniRef100_O22645 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Fritillaria agrestis RepID=RBS5_FRIAG Length = 179 Score = 120 bits (300), Expect = 6e-26 Identities = 70/164 (42%), Positives = 93/164 (56%), Gaps = 13/164 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAA---------PAQANQ---MMV 148 +A + S +AA A PA++S V P LK A A PV P+ + M V Sbjct: 4 SATMLSSVATAACAAPAQASMVAPFVGLKSA-SAFPVTQKTATGLSTLPSNGGRVQCMKV 62 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W V K FET SYLP LS E + Q++Y++ NGW+PCLEF S + +VS ++ G Sbjct: 63 WPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEF--SLEGFVSRDNNKSPG-- 118 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC QV++E C K +P A++R+ Sbjct: 119 ---YYDGRYWTMWKLPMFGCTGAAQVVKEAAECKKEYPAAFIRV 159 [189][TOP] >UniRef100_P27985 Ribulose bisphosphate carboxylase small chain F1, chloroplastic n=1 Tax=Brassica napus RepID=RBS2_BRANA Length = 181 Score = 120 bits (300), Expect = 6e-26 Identities = 65/157 (41%), Positives = 90/157 (57%), Gaps = 13/157 (8%) Frame = +2 Query: 29 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 169 S +A V PA+++ V P LK + A PV A + + M VW PV K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKANNDITSIASNGGRVSCMKVWPPVGKK 65 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 FET SYLP L++ ++ +VDY++ N WIPC+EF E + +V E G YYD Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDG 119 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLP+FGC D QVL+E+ C +P+A++R+ Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRI 156 [190][TOP] >UniRef100_P00872 Ribulose bisphosphate carboxylase small chain SSU1, chloroplastic n=1 Tax=Lemna gibba RepID=RBS1_LEMGI Length = 173 Score = 120 bits (300), Expect = 6e-26 Identities = 63/156 (40%), Positives = 83/156 (53%), Gaps = 14/156 (8%) Frame = +2 Query: 35 SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ--------------MMVWTPVNNKM 172 +AAVAR + + A + A +AN M VW P K Sbjct: 5 TAAVARVRPAQTNMVGAFNGCRSSVAFPATRKANNDLSTLPSSGGRVSCMQVWPPEGLKK 64 Query: 173 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 352 FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + S YYD R Sbjct: 65 FETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYREN-------NASPGYYDGR 117 Query: 353 YWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YWTMWKLPMFGC D QV+ E+ KA+P+ +VR+ Sbjct: 118 YWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRI 153 [191][TOP] >UniRef100_P05346 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Brassica napus RepID=RBS1_BRANA Length = 181 Score = 120 bits (300), Expect = 6e-26 Identities = 65/157 (41%), Positives = 90/157 (57%), Gaps = 13/157 (8%) Frame = +2 Query: 29 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 169 S +A V PA+++ V P LK + A PV A + + M VW PV K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSS-SAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKK 65 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 FET SYLP L++ ++ +VDY++ N WIPC+EF E + +V E G YYD Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDG 119 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLP+FGC D QVL+E+ C +P+A++R+ Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRI 156 [192][TOP] >UniRef100_Q9SDY8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena clauda RepID=Q9SDY8_9POAL Length = 168 Score = 119 bits (299), Expect = 8e-26 Identities = 61/149 (40%), Positives = 85/149 (57%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ S A + +S+ + + A V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSASSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QV++E+ K +PDAYVR+ Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRI 142 [193][TOP] >UniRef100_Q9SAX2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Aegilops sharonensis RepID=Q9SAX2_9POAL Length = 165 Score = 119 bits (299), Expect = 8e-26 Identities = 61/149 (40%), Positives = 84/149 (56%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRYMQVWPIEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QVL E+ K +PDAYVR+ Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRV 142 [194][TOP] >UniRef100_Q9FEE4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum aestivum RepID=Q9FEE4_WHEAT Length = 174 Score = 119 bits (299), Expect = 8e-26 Identities = 62/150 (41%), Positives = 85/150 (56%) Frame = +2 Query: 11 AVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 190 AV+A S+ + A + +S+ + + + V+ + M VW K FET SY Sbjct: 4 AVMASSATTVAPFQGLKSTAGLPVSRRSSGSLGRVSNGGRIRCMQVWPIEGIKKFETLSY 63 Query: 191 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 370 LPPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWK Sbjct: 64 LPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SSGYYDGRYWTMWK 116 Query: 371 LPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 LPMFGC D QVL E+ K +PDAYVR+ Sbjct: 117 LPMFGCTDATQVLNEVEEVKKEYPDAYVRV 146 [195][TOP] >UniRef100_Q107B2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa AAAB Group RepID=Q107B2_MUSPR Length = 161 Score = 119 bits (299), Expect = 8e-26 Identities = 67/164 (40%), Positives = 94/164 (57%), Gaps = 13/164 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 148 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPGNGGRVQCMKV 59 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEALVKQIEYLLRSRWIPCLEF--SHEGFVWRENHRSPG-- 115 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D +QV++E+ C K +P A++R+ Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKELEECKKEYPKAFIRI 156 [196][TOP] >UniRef100_P00869 Ribulose bisphosphate carboxylase small chain 3C, chloroplastic n=1 Tax=Pisum sativum RepID=RBS2_PEA Length = 180 Score = 119 bits (299), Expect = 8e-26 Identities = 67/164 (40%), Positives = 93/164 (56%), Gaps = 12/164 (7%) Frame = +2 Query: 5 MAAVIAKSSVSAA--VARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMV 148 MA++I+ S+V+ +R ++V P LK P K +N M V Sbjct: 1 MASMISSSAVTTVSRASRGQSAAVAPFGGLKSMTGFPVKKVNTDITSITSNGGRVKCMQV 60 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W P+ K FET SYLPPL+ +Q+ +V+Y++ GW+PCLEF E +K +V E + Sbjct: 61 WPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEF-ELEKGFVYREH-----NK 114 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 S YYD RYWTMWKLPMFG D QVL+E+ A+P A+VR+ Sbjct: 115 SPGYYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRI 158 [197][TOP] >UniRef100_Q9T4H0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Manihot esculenta RepID=Q9T4H0_MANES Length = 184 Score = 119 bits (298), Expect = 1e-25 Identities = 70/167 (41%), Positives = 92/167 (55%), Gaps = 15/167 (8%) Frame = +2 Query: 5 MAAVIAKSSVSAAVAR--PARSS-VRPMAALKPAVKAAPVAAPAQANQ------------ 139 MA + ++ A++ R PA++S V P LK + A P A+ Sbjct: 1 MATSMLSTATVASINRASPAQASMVAPFTGLK-STSAFPATTKTSADITSLASNGGRVQC 59 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW K FET SYLPPLS EQ+A+++DY++ +GWIPCLEF E + +V Sbjct: 60 MQVWPTRGKKKFETLSYLPPLSREQLASEIDYLLRSGWIPCLEF-ELEHGFVYRAHGSLP 118 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPMFGC D QVL+E+ KA PD + R+ Sbjct: 119 G-----YYDGRYWTMWKLPMFGCTDSSQVLKELDELIKAHPDGFARI 160 [198][TOP] >UniRef100_Q43746 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica napus RepID=Q43746_BRANA Length = 181 Score = 119 bits (298), Expect = 1e-25 Identities = 68/163 (41%), Positives = 94/163 (57%), Gaps = 15/163 (9%) Frame = +2 Query: 17 IAKSSVSAA--VARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVW 151 +A S +S+A V+ PA+++ V P LK + A PV + N M VW Sbjct: 1 MASSMLSSATVVSSPAQAAMVAPFTGLKSSA-AFPVTRKTNTDITSIASNGGRVNCMKVW 59 Query: 152 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 331 PV K FET SYLP L+D ++A +VDY++ N WIPC+EF E + +V E G Sbjct: 60 PPVGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG--- 115 Query: 332 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 Y D RYWTMWKLP+FGC D QVL+E+ C +P+A++R+ Sbjct: 116 --YNDGRYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRI 156 [199][TOP] >UniRef100_Q107B8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa balbisiana RepID=Q107B8_MUSBA Length = 161 Score = 119 bits (298), Expect = 1e-25 Identities = 66/164 (40%), Positives = 94/164 (57%), Gaps = 13/164 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 148 ++++ S+ + + A PA+SS V P LK + A P+ A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPITRKANADLSHLPSNGGRVQCMKV 59 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEALVKQIEYLLRSRWIPCLEF--SHEGFVWRENHRSPG-- 115 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D +QV++E+ C K +P A++R+ Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKELEECKKEYPKAFIRI 156 [200][TOP] >UniRef100_Q107B7 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa balbisiana RepID=Q107B7_MUSBA Length = 161 Score = 119 bits (298), Expect = 1e-25 Identities = 66/164 (40%), Positives = 94/164 (57%), Gaps = 13/164 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 148 ++++ S+ + + A PA+SS V P LK + A P+ A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPITRKANADLSHLPSNGGRVQCMKV 59 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKRFETLSYLPTLVDEALVKQIEYLLRSRWIPCLEF--SHEGFVWRENHRSPG-- 115 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D +QV++E+ C K +P A++R+ Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKELEECKKEYPKAFIRI 156 [201][TOP] >UniRef100_Q107A5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa AAAB Group RepID=Q107A5_MUSPR Length = 161 Score = 119 bits (298), Expect = 1e-25 Identities = 66/164 (40%), Positives = 94/164 (57%), Gaps = 13/164 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 148 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPSNGGRVQCMKV 59 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W K FET SYLP L +E + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVNEPLVKQIEYLLRSKWIPCLEF--SHEGFVGRENHRSPG-- 115 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D +QV++E+ C K +P A++R+ Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEECKKEYPKAFIRI 156 [202][TOP] >UniRef100_C6SVL2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=C6SVL2_SOYBN Length = 178 Score = 119 bits (298), Expect = 1e-25 Identities = 67/162 (41%), Positives = 84/162 (51%), Gaps = 10/162 (6%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 154 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWA 60 Query: 155 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 334 PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSPG---- 115 Query: 335 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL+E+ A+P+ ++R+ Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRI 156 [203][TOP] >UniRef100_A9PJN7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa x Populus deltoides RepID=A9PJN7_9ROSI Length = 189 Score = 119 bits (298), Expect = 1e-25 Identities = 67/164 (40%), Positives = 95/164 (57%), Gaps = 13/164 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMV 148 ++VI+ ++V+ PA+++ V P LK + A PV A + M V Sbjct: 3 SSVISSAAVATVNRTPAQANMVAPFNGLK-STSAFPVTRKANNDITSIASNGGRVQCMQV 61 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W P K FET SYLP L+ EQ+A +++Y++ N W+PCLEF E +K +V E G Sbjct: 62 WPPTGLKKFETLSYLPDLTTEQLAREIEYLLRNKWVPCLEF-ELEKGWVYREHHQSPG-- 118 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC + QVL E+ KA+P+++VR+ Sbjct: 119 ---YYDGRYWTMWKLPMFGCTEASQVLIELEEAKKAYPNSFVRI 159 [204][TOP] >UniRef100_A9PJL4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa x Populus deltoides RepID=A9PJL4_9ROSI Length = 181 Score = 119 bits (298), Expect = 1e-25 Identities = 67/164 (40%), Positives = 95/164 (57%), Gaps = 13/164 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMV 148 ++VI+ ++V+ PA+++ V P LK + A PV A + M V Sbjct: 3 SSVISSAAVATVNRTPAQANMVAPFNGLK-STSAFPVTRKANNDITSIASNGGRVQCMQV 61 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W P K FET SYLP L+ EQ+A +++Y++ N W+PCLEF E +K +V E G Sbjct: 62 WPPTGLKKFETLSYLPDLTTEQLAREIEYLLRNKWVPCLEF-ELEKGWVYREHHQSPG-- 118 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC + QVL E+ KA+P+++VR+ Sbjct: 119 ---YYDGRYWTMWKLPMFGCTEASQVLIELEEAKKAYPNSFVRI 159 [205][TOP] >UniRef100_A9PG69 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa RepID=A9PG69_POPTR Length = 182 Score = 119 bits (298), Expect = 1e-25 Identities = 67/165 (40%), Positives = 98/165 (59%), Gaps = 14/165 (8%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ-------------MM 145 +++I+ ++V+ PA+++ V P LK A A PV+ +AN M Sbjct: 4 SSMISSAAVATVNRTPAQANMVAPFNGLKSAA-AFPVST-RKANDITSIASNGGRVQCMQ 61 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P K FET SYLP L++E++A ++DY++ + W+PCLEF E +K +V E G Sbjct: 62 VWPPTGLKKFETLSYLPDLTEEELAKEIDYLLRSKWVPCLEF-ELEKGWVYREHHSSPG- 119 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC + QVL E+ KA+P+A++R+ Sbjct: 120 ----YYDGRYWTMWKLPMFGCTEASQVLLELEEAKKAYPNAFIRI 160 [206][TOP] >UniRef100_P08474 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Cucumis sativus RepID=RBS_CUCSA Length = 189 Score = 119 bits (298), Expect = 1e-25 Identities = 69/166 (41%), Positives = 98/166 (59%), Gaps = 14/166 (8%) Frame = +2 Query: 5 MAAVIAKSSVSAAV--ARPARSS-VRPMAALKPA----------VKAAPVAAPAQANQMM 145 MA+ I S+ A+V A PA++S V P LK + V +A+ A Q M Sbjct: 1 MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCM 60 Query: 146 -VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 322 VW P+ + FET SYLP +S+EQ++ + DY++ NGW+PC+EF + +V E+ G Sbjct: 61 KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEF-DIGSGFVYRENHRSPG 119 Query: 323 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 +YD RYWTMWKLPMFGC D QV++EI K +PDA++R+ Sbjct: 120 -----FYDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRV 160 [207][TOP] >UniRef100_P26667 Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=1 Tax=Triticum aestivum RepID=RBS2_WHEAT Length = 175 Score = 119 bits (298), Expect = 1e-25 Identities = 63/151 (41%), Positives = 87/151 (57%), Gaps = 1/151 (0%) Frame = +2 Query: 11 AVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFS 187 AV+A S+ + A + +S+ P++ + + V+ + M VW K FET S Sbjct: 4 AVMASSATTVAPFQGLKSTAGLPISCRSGSTGLSSVSNGGRIRCMQVWPIEGIKKFETLS 63 Query: 188 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 367 YLPPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMW Sbjct: 64 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMW 116 Query: 368 KLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 KLPMFGC D QVL E+ K +PDAYVR+ Sbjct: 117 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRV 147 [208][TOP] >UniRef100_P00871 Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic n=1 Tax=Triticum aestivum RepID=RBS1_WHEAT Length = 174 Score = 119 bits (298), Expect = 1e-25 Identities = 62/150 (41%), Positives = 85/150 (56%) Frame = +2 Query: 11 AVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 190 AV+A S+ + A + +S+ + + V+ + M VW K FET SY Sbjct: 4 AVMASSATTVAPFQGLKSTAGLPVSRRSRGSLGSVSNGGRIRCMQVWPIEGIKKFETLSY 63 Query: 191 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 370 LPPLS E ++ QVDY++ + W+PCLEF++ + + S S YYD RYWTMWK Sbjct: 64 LPPLSTEALSKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWK 116 Query: 371 LPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 LPMFGC D QVL E+ K +PDAYVR+ Sbjct: 117 LPMFGCTDATQVLNEVEEVKKEYPDAYVRV 146 [209][TOP] >UniRef100_P00865 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Glycine max RepID=RBS1_SOYBN Length = 178 Score = 119 bits (298), Expect = 1e-25 Identities = 66/162 (40%), Positives = 85/162 (52%), Gaps = 10/162 (6%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 154 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWP 60 Query: 155 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 334 P+ K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E + S Sbjct: 61 PIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREH-----NRSP 114 Query: 335 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL+E+ A+P+ ++R+ Sbjct: 115 XYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRI 156 [210][TOP] >UniRef100_Q9SAW4 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Secale cereale RepID=Q9SAW4_SECCE Length = 165 Score = 119 bits (297), Expect = 1e-25 Identities = 62/149 (41%), Positives = 84/149 (56%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ S A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QVL E+ K +PDAYVR+ Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRV 142 [211][TOP] >UniRef100_Q9S7N3 Ribulose bisphosphate carboxylase small chain (Fragment) n=2 Tax=Triticeae RepID=Q9S7N3_AEGLO Length = 165 Score = 119 bits (297), Expect = 1e-25 Identities = 61/149 (40%), Positives = 84/149 (56%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QVL E+ K +PDAYVR+ Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRV 142 [212][TOP] >UniRef100_Q9FUJ5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=Q9FUJ5_SOYBN Length = 178 Score = 119 bits (297), Expect = 1e-25 Identities = 67/162 (41%), Positives = 84/162 (51%), Gaps = 10/162 (6%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 154 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDTISIASNGGRVQCMQVWP 60 Query: 155 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 334 PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSPG---- 115 Query: 335 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL+E+ A+P+ ++R+ Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRI 156 [213][TOP] >UniRef100_Q9FUJ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=Q9FUJ4_SOYBN Length = 178 Score = 119 bits (297), Expect = 1e-25 Identities = 67/162 (41%), Positives = 84/162 (51%), Gaps = 10/162 (6%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 154 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWP 60 Query: 155 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 334 PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSPG---- 115 Query: 335 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL+E+ A+P+ ++R+ Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRI 156 [214][TOP] >UniRef100_Q9FRZ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum aestivum RepID=Q9FRZ4_WHEAT Length = 175 Score = 119 bits (297), Expect = 1e-25 Identities = 63/151 (41%), Positives = 85/151 (56%), Gaps = 1/151 (0%) Frame = +2 Query: 11 AVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFS 187 AV+A S+ S A + +S+ P++ V+ + M VW K FET S Sbjct: 4 AVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLS 63 Query: 188 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 367 YLPPLS E + QVDY++ + W+PCLEF++ + R + S YYD RYWTMW Sbjct: 64 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMW 116 Query: 368 KLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 KLPMFGC D QV+ E+ K +PDAYVR+ Sbjct: 117 KLPMFGCTDATQVINEVEEVKKEYPDAYVRI 147 [215][TOP] >UniRef100_Q84LN2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Citrus limon RepID=Q84LN2_CITLI Length = 119 Score = 119 bits (297), Expect = 1e-25 Identities = 56/107 (52%), Positives = 71/107 (66%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW P K FET SYLPPLSDE + +++Y++ +GWIPCLEF E +K +V E Sbjct: 7 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLLRSGWIPCLEF-ELEKGWVYREHHRSP 65 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPMFGC D QVL+E+ K +P ++VR+ Sbjct: 66 G-----YYDGRYWTMWKLPMFGCTDATQVLKEVGEVQKEYPHSFVRI 107 [216][TOP] >UniRef100_Q6A160 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Limonium gibertii RepID=Q6A160_9CARY Length = 153 Score = 119 bits (297), Expect = 1e-25 Identities = 55/107 (51%), Positives = 71/107 (66%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW P K FET SYLPPL E +A ++ Y++ GW+PCLEF E +AY+ E Sbjct: 33 MQVWPPEGLKKFETLSYLPPLDREGLANEISYLMRMGWVPCLEF-EVGEAYIHREYHNLP 91 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPM+GC DP QVL+E+ C++ +P A+VR+ Sbjct: 92 G-----YYDGRYWTMWKLPMYGCTDPAQVLKEVDECSQLYPHAHVRI 133 [217][TOP] >UniRef100_Q39832 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=Q39832_SOYBN Length = 178 Score = 119 bits (297), Expect = 1e-25 Identities = 67/162 (41%), Positives = 84/162 (51%), Gaps = 10/162 (6%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 154 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWP 60 Query: 155 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 334 PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSPG---- 115 Query: 335 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL+E+ A+P+ ++R+ Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRI 156 [218][TOP] >UniRef100_B1PLM0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Hevea brasiliensis RepID=B1PLM0_HEVBR Length = 183 Score = 119 bits (297), Expect = 1e-25 Identities = 70/166 (42%), Positives = 92/166 (55%), Gaps = 14/166 (8%) Frame = +2 Query: 5 MAAVIAKSSVSAAVAR--PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ------M 142 MA+ + ++ A + R PA++S V P LK P + + A+ M Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCM 60 Query: 143 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 322 VW P K FETF YLPPL+ EQ+A +V+Y+ GW+PCLEF E + V E G Sbjct: 61 QVWPPRGKKFFETFLYLPPLTREQLAKEVEYLFCKGWVPCLEF-ELEHGTVYREYHRSPG 119 Query: 323 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D +QVL+E+ KA+PD Y R+ Sbjct: 120 -----YYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRI 160 [219][TOP] >UniRef100_A9XP21 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Sonneratia apetala RepID=A9XP21_9MYRT Length = 178 Score = 119 bits (297), Expect = 1e-25 Identities = 69/158 (43%), Positives = 91/158 (57%), Gaps = 13/158 (8%) Frame = +2 Query: 26 SSVSAAVAR--PARSS-VRPMAALKPAV------KAAPVAAPA----QANQMMVWTPVNN 166 SS + AV R PA++S V P LK + K A + + A + M VW P Sbjct: 2 SSATMAVNRTAPAQASMVAPFTGLKSSSAFPTTRKTADITSLASNGGRVQCMQVWPPEGL 61 Query: 167 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 346 K FET SYLP LS EQ+ +++Y++ NGW PCLEF+ AY E+ G YYD Sbjct: 62 KKFETLSYLPDLSREQLIKEIEYLIRNGWFPCLEFSCPAFAYPYRENHRSPG-----YYD 116 Query: 347 NRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLPMFGC DP+QV++E+ KA+P + R+ Sbjct: 117 GRYWTMWKLPMFGCTDPIQVIKELDEGIKAYPTYFFRI 154 [220][TOP] >UniRef100_A9PHQ1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa RepID=A9PHQ1_POPTR Length = 181 Score = 119 bits (297), Expect = 1e-25 Identities = 66/164 (40%), Positives = 95/164 (57%), Gaps = 13/164 (7%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMV 148 ++VI+ ++V+ PA+++ V P LK + A PV A + M V Sbjct: 3 SSVISSAAVATVNRTPAQANMVAPFNGLK-STSAFPVTRKANNDITSIASNGGRVQCMQV 61 Query: 149 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 328 W P K FET SYLP L+ EQ+A +++Y++ N W+PCLEF E +K +V E G Sbjct: 62 WPPTGLKKFETLSYLPDLTTEQLAQEIEYLLRNKWVPCLEF-ELEKGWVYREHHQSPG-- 118 Query: 329 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC + QVL E+ KA+P++++R+ Sbjct: 119 ---YYDGRYWTMWKLPMFGCTEASQVLIELEEAKKAYPNSFIRI 159 [221][TOP] >UniRef100_Q9SNZ6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena maroccana RepID=Q9SNZ6_9POAL Length = 168 Score = 118 bits (296), Expect = 2e-25 Identities = 61/149 (40%), Positives = 84/149 (56%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ S A + +S+ + + V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QV+RE+ K +PDAYVR+ Sbjct: 114 PMFGCTDASQVIREVEEVKKEYPDAYVRI 142 [222][TOP] >UniRef100_Q9SAX5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Aegilops speltoides RepID=Q9SAX5_AEGSP Length = 165 Score = 118 bits (296), Expect = 2e-25 Identities = 61/149 (40%), Positives = 84/149 (56%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QVL E+ K +PDAYVR+ Sbjct: 114 PMFGCTDATQVLSEVEEVKKEYPDAYVRV 142 [223][TOP] >UniRef100_C6T1Y2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=C6T1Y2_SOYBN Length = 178 Score = 118 bits (296), Expect = 2e-25 Identities = 66/162 (40%), Positives = 84/162 (51%), Gaps = 10/162 (6%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 154 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWP 60 Query: 155 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 334 P+ K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSPG---- 115 Query: 335 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL+E+ A+P+ ++R+ Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRI 156 [224][TOP] >UniRef100_Q9ZWG6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Hordeum vulgare RepID=Q9ZWG6_HORVU Length = 165 Score = 118 bits (295), Expect = 2e-25 Identities = 60/149 (40%), Positives = 84/149 (56%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPL+ E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QVL E+ K +PDAYVR+ Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRI 142 [225][TOP] >UniRef100_Q9ZSS0 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena clauda RepID=Q9ZSS0_9POAL Length = 168 Score = 118 bits (295), Expect = 2e-25 Identities = 59/149 (39%), Positives = 85/149 (57%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QV++E+ K +PDAYVR+ Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRI 142 [226][TOP] >UniRef100_Q9SNZ8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena clauda RepID=Q9SNZ8_9POAL Length = 168 Score = 118 bits (295), Expect = 2e-25 Identities = 60/149 (40%), Positives = 85/149 (57%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ + A + +S+ + + A V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSASSLGNVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QV++E+ K +PDAYVR+ Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRI 142 [227][TOP] >UniRef100_Q9AXP2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Citrus reticulata RepID=Q9AXP2_CITRE Length = 118 Score = 118 bits (295), Expect = 2e-25 Identities = 55/107 (51%), Positives = 70/107 (65%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW P K FET SYLPPLSDE + ++ Y++ +GWIPCLEF E +K +V E Sbjct: 2 MQVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEF-ELEKGWVYREHHSSP 60 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPM+GC D QVL+E+ K +P ++VR+ Sbjct: 61 G-----YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRI 102 [228][TOP] >UniRef100_Q9AUJ6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Flaveria ramosissima RepID=Q9AUJ6_FLARA Length = 131 Score = 118 bits (295), Expect = 2e-25 Identities = 53/107 (49%), Positives = 72/107 (67%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW P+ K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+ Sbjct: 9 MKVWPPLGKKKYETLSYLPNLTETQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENHRSP 67 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPMFGC D QV++E+ C K +P A++R+ Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSSQVMKELGECKKEYPQAWIRI 109 [229][TOP] >UniRef100_P29684 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Hevea brasiliensis RepID=RBS_HEVBR Length = 183 Score = 118 bits (295), Expect = 2e-25 Identities = 69/166 (41%), Positives = 93/166 (56%), Gaps = 14/166 (8%) Frame = +2 Query: 5 MAAVIAKSSVSAAVAR--PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ------M 142 MA+ + ++ A + R PA++S V P LK P + + A+ M Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCM 60 Query: 143 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 322 VW P K +ET SYLPPL+ EQ+A +V+Y++ GW+PCLEF E + V E G Sbjct: 61 QVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEF-ELEHGTVYREYHRSPG 119 Query: 323 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D +QVL+E+ KA+PD Y R+ Sbjct: 120 -----YYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRI 160 [230][TOP] >UniRef100_Q42823 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Glycine tabacina RepID=RBS_GLYTA Length = 178 Score = 118 bits (295), Expect = 2e-25 Identities = 67/162 (41%), Positives = 85/162 (52%), Gaps = 10/162 (6%) Frame = +2 Query: 5 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 154 MA+ + S V R +V P LK P K A +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGTVAPFTGLKSMAGFPTRKTNNDIASIASNGGRVQCMQVWP 60 Query: 155 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 334 K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 TTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHHRSPG---- 115 Query: 335 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC D QVL+E+ A+P+A++R+ Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNAFIRI 156 [231][TOP] >UniRef100_Q9SNZ7 Ribulose bisphosphate carboxylase small chain (Fragment) n=2 Tax=Avena RepID=Q9SNZ7_9POAL Length = 168 Score = 117 bits (294), Expect = 3e-25 Identities = 60/149 (40%), Positives = 84/149 (56%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ S A + +S+ + + V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQELKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QV++E+ K +PDAYVR+ Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRI 142 [232][TOP] >UniRef100_Q9SAW9 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Aegilops tauschii RepID=Q9SAW9_AEGTA Length = 165 Score = 117 bits (294), Expect = 3e-25 Identities = 61/149 (40%), Positives = 84/149 (56%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGIVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QVL E+ K +PDAYVR+ Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRV 142 [233][TOP] >UniRef100_Q9SAW8 Ribulose bisphosphate carboxylase small chain (Fragment) n=7 Tax=Triticeae RepID=Q9SAW8_TRITI Length = 165 Score = 117 bits (294), Expect = 3e-25 Identities = 61/149 (40%), Positives = 84/149 (56%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QVL E+ K +PDAYVR+ Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRV 142 [234][TOP] >UniRef100_Q9SAW7 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Triticum turgidum subsp. dicoccoides RepID=Q9SAW7_TRITU Length = 165 Score = 117 bits (294), Expect = 3e-25 Identities = 61/149 (40%), Positives = 84/149 (56%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVGRRSSGSLSSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QVL E+ K +PDAYVR+ Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRV 142 [235][TOP] >UniRef100_Q2V327 Ribulose bisphosphate carboxylase small chain n=1 Tax=Arabidopsis thaliana RepID=Q2V327_ARATH Length = 174 Score = 117 bits (294), Expect = 3e-25 Identities = 64/157 (40%), Positives = 87/157 (55%), Gaps = 13/157 (8%) Frame = +2 Query: 29 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 169 S +A V PA+++ V P LK + A PV + + M VW P+ K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKK 65 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 FET SYLP LSD ++A +VDY++ N WIPC+EF + G+ YYD Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFE------------LEHGNTPG-YYDG 112 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLP+FGC D QVL+E+ C K +P A++R+ Sbjct: 113 RYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRI 149 [236][TOP] >UniRef100_A9PJ78 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa x Populus deltoides RepID=A9PJ78_9ROSI Length = 182 Score = 117 bits (294), Expect = 3e-25 Identities = 66/165 (40%), Positives = 98/165 (59%), Gaps = 14/165 (8%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ-------------MM 145 +++I+ ++V+ PA+++ V P LK + A PV+ +AN M Sbjct: 4 SSMISSAAVATVHRTPAQANMVAPFNGLK-STAAFPVST-RKANDITSIASNGGRVQCMQ 61 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P K FET SYLP L++E++A ++DY++ + W+PCLEF E +K +V E G Sbjct: 62 VWPPTGLKKFETLSYLPDLTEEELAKEIDYLLRSKWVPCLEF-ELEKGWVHREHHSSPG- 119 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC + QVL E+ KA+P+A++R+ Sbjct: 120 ----YYDGRYWTMWKLPMFGCTEASQVLVELGEAKKAYPNAFIRI 160 [237][TOP] >UniRef100_A9PFS6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa RepID=A9PFS6_POPTR Length = 182 Score = 117 bits (294), Expect = 3e-25 Identities = 66/165 (40%), Positives = 97/165 (58%), Gaps = 14/165 (8%) Frame = +2 Query: 8 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ-------------MM 145 +++I+ ++V+ P +++ V P LK A A PV+ +AN M Sbjct: 4 SSMISSAAVATVNRTPVQANMVAPFNGLKSAA-AFPVST-RKANDITSIASNGGRVQCMQ 61 Query: 146 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 325 VW P K FET SYLP L++E++A ++DY++ + W+PCLEF E +K +V E G Sbjct: 62 VWPPTGLKKFETLSYLPDLTEEELAKEIDYLLRSKWVPCLEF-ELEKGWVYREHHSSPG- 119 Query: 326 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYWTMWKLPMFGC + QVL E+ KA+P+A++R+ Sbjct: 120 ----YYDGRYWTMWKLPMFGCTEASQVLLELEEAKKAYPNAFIRI 160 [238][TOP] >UniRef100_A9NZM2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=A9NZM2_PICSI Length = 159 Score = 117 bits (294), Expect = 3e-25 Identities = 60/138 (43%), Positives = 77/138 (55%), Gaps = 12/138 (8%) Frame = +2 Query: 83 ALKPAVKAAPVAAPAQANQ------------MMVWTPVNNKMFETFSYLPPLSDEQIAAQ 226 AL A VAAP + + M VW P NN FET SYLP L+ EQ+ + Sbjct: 7 ALSSTAAVAAVAAPPKTSNGNGSSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKE 66 Query: 227 VDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQV 406 V+Y++ N W+PCLEF E ++GS YYD RYW MWKLPMFGC + QV Sbjct: 67 VEYLLRNKWVPCLEFDEDGII------KRKYGSTPG-YYDGRYWVMWKLPMFGCTEASQV 119 Query: 407 LREIVACTKAFPDAYVRL 460 L E+ C KA+P A++R+ Sbjct: 120 LNEVNECAKAYPKAFIRV 137 [239][TOP] >UniRef100_A7YVW6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Actinidia chinensis RepID=A7YVW6_ACTCH Length = 176 Score = 117 bits (294), Expect = 3e-25 Identities = 62/156 (39%), Positives = 92/156 (58%), Gaps = 5/156 (3%) Frame = +2 Query: 8 AAVIAKSSVS----AAVARPARSSVRPMA-ALKPAVKAAPVAAPAQANQMMVWTPVNNKM 172 A+ I+ S+V+ A++A P P A +L +++ ++ + M VW P+ K Sbjct: 3 ASTISSSAVTSVTRASLASPFAGVKSPSAISLGRKLESGSRSSGFKVKCMQVWPPLGKKK 62 Query: 173 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 352 FET SYLPPL +E + Q+DY++ GWIPC+EF+ + +V E G YYD R Sbjct: 63 FETLSYLPPLPEEALLKQIDYLIRMGWIPCIEFSVGE-GFVYREHHHSPG-----YYDGR 116 Query: 353 YWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YWTMWKLPM+GC D QV E+ A K +PD+++R+ Sbjct: 117 YWTMWKLPMYGCTDSTQVRAEVEANKKEYPDSFIRI 152 [240][TOP] >UniRef100_A1YN03 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica rapa RepID=A1YN03_BRACM Length = 181 Score = 117 bits (294), Expect = 3e-25 Identities = 64/157 (40%), Positives = 89/157 (56%), Gaps = 13/157 (8%) Frame = +2 Query: 29 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 169 S +A V PA+++ V P LK + A PV A + + M VW PV K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSS-SAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKK 65 Query: 170 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 349 FET SYLP L++ ++ +VDY++ N WIPC+E E + +V E G YYD Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEL-ELEHGFVYREHGSTPG-----YYDG 119 Query: 350 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 RYWTMWKLP+FGC D QVL+E+ C +P+A++R+ Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRI 156 [241][TOP] >UniRef100_O22077 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Fagus crenata RepID=RBS_FAGCR Length = 182 Score = 117 bits (294), Expect = 3e-25 Identities = 68/166 (40%), Positives = 96/166 (57%), Gaps = 14/166 (8%) Frame = +2 Query: 5 MAAVIAKSSVSAAVAR--PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ------M 142 MA+ + S+ A V+R PA+++ V P LK PA + + + A+ M Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCM 60 Query: 143 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 322 VW P+ + FET SYLPPLS E +A Q++Y++ GWIPCLEF E + +V E+ G Sbjct: 61 KVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEF-ELEHPFVYRENNRSPG 119 Query: 323 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 YYD RYW MWKLPMFGC D QVL E+ +K +P +++R+ Sbjct: 120 -----YYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRI 160 [242][TOP] >UniRef100_Q9ZRS6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Secale cereale RepID=Q9ZRS6_SECCE Length = 175 Score = 117 bits (293), Expect = 4e-25 Identities = 62/151 (41%), Positives = 86/151 (56%), Gaps = 1/151 (0%) Frame = +2 Query: 11 AVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFS 187 AV+A S+ + A + +S+ P+ + + V+ + M VW K FET S Sbjct: 4 AVMASSATTVAPFQGLKSTAGLPVGRRSGSAGLSSVSNGGRIRCMQVWPIEGIKKFETLS 63 Query: 188 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 367 YLPPLS E + QVDY++ + W+PCLEF++ + + + S YYD RYWTMW Sbjct: 64 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNN-------SPGYYDGRYWTMW 116 Query: 368 KLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 KLPMFGC D QVL E+ K +PDAYVR+ Sbjct: 117 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRV 147 [243][TOP] >UniRef100_Q9TLH3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Manihot esculenta RepID=Q9TLH3_MANES Length = 184 Score = 117 bits (293), Expect = 4e-25 Identities = 56/107 (52%), Positives = 69/107 (64%) Frame = +2 Query: 140 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 319 M VW K FET SYLPPLS EQ+A+++DY++ +GWIPCLEF E + +V Sbjct: 60 MQVWPTRGKKKFETLSYLPPLSREQLASEIDYLLRSGWIPCLEF-ELEHGFVYRAHGSLP 118 Query: 320 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 G YYD RYWTMWKLPMFGC D QVL+E+ KA PD + R+ Sbjct: 119 G-----YYDGRYWTMWKLPMFGCTDSSQVLKELDELIKAHPDGFARI 160 [244][TOP] >UniRef100_Q9SP00 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena agadiriana RepID=Q9SP00_9POAL Length = 168 Score = 117 bits (293), Expect = 4e-25 Identities = 61/149 (40%), Positives = 86/149 (57%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ S A + +S+ + + V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS+E + Q+D+++ + W+PCLEF S ++ E +GS YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFRE----YGSTPG-YYDGRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QV++E+ K +PDAYVR+ Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRI 142 [245][TOP] >UniRef100_Q9SDY7 Ribulose bisphosphate carboxylase small chain (Fragment) n=2 Tax=Avena RepID=Q9SDY7_9POAL Length = 168 Score = 117 bits (293), Expect = 4e-25 Identities = 60/149 (40%), Positives = 84/149 (56%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ S A + +S+ + + V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QV++E+ K +PDAYVR+ Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRI 142 [246][TOP] >UniRef100_Q9SAX6 Ribulose bisphosphate carboxylase small chain (Fragment) n=3 Tax=Triticeae RepID=Q9SAX6_WHEAT Length = 165 Score = 117 bits (293), Expect = 4e-25 Identities = 61/149 (40%), Positives = 84/149 (56%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSGSLGRVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QVL E+ K +PDAYVR+ Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRV 142 [247][TOP] >UniRef100_Q9SAX1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Aegilops bicornis RepID=Q9SAX1_AEGBI Length = 164 Score = 117 bits (293), Expect = 4e-25 Identities = 62/149 (41%), Positives = 84/149 (56%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ S A + +S+ + + V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTGGLPVSRRSRGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD+RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDSRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QVL E+ K +PDAYVR+ Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRV 142 [248][TOP] >UniRef100_Q9S7W0 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena strigosa RepID=Q9S7W0_9POAL Length = 168 Score = 117 bits (293), Expect = 4e-25 Identities = 60/149 (40%), Positives = 84/149 (56%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 193 V+A S+ S A + +S+ + + V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 194 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 373 PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113 Query: 374 PMFGCRDPMQVLREIVACTKAFPDAYVRL 460 PMFGC D QV++E+ K +PDAYVR+ Sbjct: 114 PMFGCTDASQVIKEVEEVKKKYPDAYVRI 142 [249][TOP] >UniRef100_Q84Y16 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chrysanthemum x morifolium RepID=Q84Y16_CHRMO Length = 179 Score = 117 bits (293), Expect = 4e-25 Identities = 68/159 (42%), Positives = 90/159 (56%), Gaps = 14/159 (8%) Frame = +2 Query: 26 SSVSAAVARPAR---SSVRPMAALKPAVKAAPV--------AAPAQANQ---MMVWTPVN 163 SS A V R S V P LK V A PV + P+ + M VW P+ Sbjct: 6 SSAVATVNRTTSAQASMVAPFTGLKSNV-AFPVTKKSNDFSSLPSNGGRVQCMKVWPPLG 64 Query: 164 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 343 K +ET SYLPPL++ Q+A +V+Y++ N W+PCLEF E + + E+ G YY Sbjct: 65 LKKYETLSYLPPLTETQLAKEVEYLLRNKWVPCLEF-ELEHGFPYRENNRSPG-----YY 118 Query: 344 DNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 D RYWTMWKLPMFGC D QVL+E+ C K +P ++VR+ Sbjct: 119 DGRYWTMWKLPMFGCNDASQVLKELNECKKEYPQSWVRI 157 [250][TOP] >UniRef100_Q2QTJ7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Oryza sativa Japonica Group RepID=Q2QTJ7_ORYSJ Length = 175 Score = 117 bits (293), Expect = 4e-25 Identities = 61/150 (40%), Positives = 87/150 (58%), Gaps = 1/150 (0%) Frame = +2 Query: 14 VIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 190 V+A S+ S A + +S+ P++ + V+ + + M VW K FET SY Sbjct: 5 VMASSATSVAPFQGLKSTAGLPVSRRSNSAGLGSVSNGGRISCMQVWPIEGIKKFETLSY 64 Query: 191 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 370 LPPL+ E + Q++Y++ + W+PCLEF++ Y N S YYD RYWTMWK Sbjct: 65 LPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR-------SPGYYDGRYWTMWK 117 Query: 371 LPMFGCRDPMQVLREIVACTKAFPDAYVRL 460 LPMFGC D QVL+E+ KA+PDA+VR+ Sbjct: 118 LPMFGCTDATQVLKELEEAKKAYPDAFVRI 147