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[1][TOP]
>UniRef100_P12852 Oxygen-evolving enhancer protein 3, chloroplastic n=2
Tax=Chlamydomonas reinhardtii RepID=PSBQ_CHLRE
Length = 199
Score = 242 bits (618), Expect = 8e-63
Identities = 128/130 (98%), Positives = 128/130 (98%)
Frame = +2
Query: 35 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD 214
MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD
Sbjct: 1 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDD 60
Query: 215 RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLHVFIQNSY 394
RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADL VFIQ SY
Sbjct: 61 RSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLDVFIQKSY 120
Query: 395 WTEAREQLRR 424
WTEAREQLRR
Sbjct: 121 WTEAREQLRR 130
[2][TOP]
>UniRef100_Q1WLV1 Chloroplast oxygen-evolving protein 3 n=1 Tax=Chlamydomonas incerta
RepID=Q1WLV1_CHLIN
Length = 200
Score = 228 bits (581), Expect = 2e-58
Identities = 122/131 (93%), Positives = 125/131 (95%), Gaps = 1/131 (0%)
Frame = +2
Query: 35 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALAL-TPVDLFD 211
MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAA A TPVDLFD
Sbjct: 1 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAAFAAATPVDLFD 60
Query: 212 DRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLHVFIQNS 391
DRS R+RGFDLIYEARDLDLPQNVREGFTQARASL+ETKKRVKESEARIDADL VFI+ S
Sbjct: 61 DRSARERGFDLIYEARDLDLPQNVREGFTQARASLEETKKRVKESEARIDADLDVFIKKS 120
Query: 392 YWTEAREQLRR 424
YWTEAREQLRR
Sbjct: 121 YWTEAREQLRR 131
[3][TOP]
>UniRef100_Q41643 Oxygen-evolving enhancer protein 3, chloroplastic n=1 Tax=Volvox
carteri RepID=PSBQ_VOLCA
Length = 202
Score = 183 bits (465), Expect = 4e-45
Identities = 100/132 (75%), Positives = 108/132 (81%), Gaps = 2/132 (1%)
Frame = +2
Query: 35 MALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAV--APKAALALTPVDLF 208
MALA KVA+RPAVASRRG VVVRAS ESRRAVLGGLLAS V A+ A KA A TPVDLF
Sbjct: 1 MALAQKVASRPAVASRRGVVVVRASVESRRAVLGGLLASTVVALTSANKAQAAATPVDLF 60
Query: 209 DDRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLHVFIQN 388
DDR VR+ GFDLIYEARDLDL Q+ R+G QAR S+D T KRVKESE RIDADL FI+
Sbjct: 61 DDRKVRETGFDLIYEARDLDLRQSARDGLDQARGSIDATIKRVKESETRIDADLEGFIKK 120
Query: 389 SYWTEAREQLRR 424
+YWTEAREQLRR
Sbjct: 121 NYWTEAREQLRR 132
[4][TOP]
>UniRef100_Q7XYI7 Oxygen-evolving enhancer protein 3 n=1 Tax=Bigelowiella natans
RepID=Q7XYI7_BIGNA
Length = 237
Score = 96.3 bits (238), Expect = 9e-19
Identities = 61/132 (46%), Positives = 78/132 (59%)
Frame = +2
Query: 29 AKMALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLF 208
+++ALA TR A S R V A+ RRAVLGGL +A A K+A AL V L
Sbjct: 45 SELALAQ---TRTAGVSCRN--VRTAAQMDRRAVLGGLFGTAAFGAA-KSAQALQDVQLI 98
Query: 209 DDRSVRDRGFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLHVFIQN 388
DDR + GF++IYEARDL L Q+ R+G TQAR L ETKKR +E ++ + F+
Sbjct: 99 DDRKAKKNGFEIIYEARDLSLDQDTRDGMTQARTGLQETKKRAIGAEKKL-TEAGSFVDK 157
Query: 389 SYWTEAREQLRR 424
YW+E R LRR
Sbjct: 158 KYWSEGRTVLRR 169
[5][TOP]
>UniRef100_B5A4I8 Photosystem II oxygen evolving enhancer protein 3 n=1
Tax=Gymnochlora stellata RepID=B5A4I8_GYMST
Length = 222
Score = 96.3 bits (238), Expect = 9e-19
Identities = 56/124 (45%), Positives = 72/124 (58%), Gaps = 1/124 (0%)
Frame = +2
Query: 56 ATRPAVASRRGAVVVRASGE-SRRAVLGGLLASAVAAVAPKAALALTPVDLFDDRSVRDR 232
ATR + R VRA + RR + GL + AV A A+T DL DDR +
Sbjct: 38 ATRASTGCRN----VRAQAQMDRRTAMTGLFGAM--AVGANKAFAVTSPDLIDDRKAKST 91
Query: 233 GFDLIYEARDLDLPQNVREGFTQARASLDETKKRVKESEARIDADLHVFIQNSYWTEARE 412
GFD+IYEARDL L Q+ R+GFTQAR+ L ETK RV ++E ++ + F+ YWTE R
Sbjct: 92 GFDIIYEARDLSLDQDTRDGFTQARSGLKETKTRVMDAEKKL-TEAGAFVDKKYWTEGRN 150
Query: 413 QLRR 424
LRR
Sbjct: 151 VLRR 154
[6][TOP]
>UniRef100_C1EI28 Oxygen-evolving enhancer protein 3, chloroplast n=1 Tax=Micromonas
sp. RCC299 RepID=C1EI28_9CHLO
Length = 205
Score = 78.6 bits (192), Expect = 2e-13
Identities = 49/143 (34%), Positives = 80/143 (55%), Gaps = 10/143 (6%)
Frame = +2
Query: 26 IAKMALASKVATRPAVASRRGA------VVVRASGESRRAVLGGLLASAVAAVAPKAALA 187
+A ++ A+ V T A+ + A V V AS ++R+A LLA+ V A+ A+A
Sbjct: 1 MAAISSAASVFTGKALVQAKTAPKAKASVAVTASADARKAA--SLLAAGVIALQATPAMA 58
Query: 188 LTPVDLFDDRSVRDRGFDLIYEARDLDLPQNVREG----FTQARASLDETKKRVKESEAR 355
L ++L D+R G LIYEARDL++ Q+VR+ F+ + + +T R ES R
Sbjct: 59 LNMIELQDERQTNKNGLQLIYEARDLNITQSVRQDGNSRFSFQKLTTAQTATRASESIKR 118
Query: 356 IDADLHVFIQNSYWTEAREQLRR 424
++ D+ ++ +YWT+A +LRR
Sbjct: 119 LNTDVGEYVGKAYWTQAANELRR 141
[7][TOP]
>UniRef100_C1N657 Oxygen-evolving enhancer protein 3, chloroplast n=1 Tax=Micromonas
pusilla CCMP1545 RepID=C1N657_9CHLO
Length = 205
Score = 72.0 bits (175), Expect = 2e-11
Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 4/128 (3%)
Frame = +2
Query: 53 VATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDDRSVRDR 232
V PAV VV + S++AV L + V A + ALAL ++L D R
Sbjct: 16 VVAAPAVRKAEKVSVVVKADMSKKAV--SLAVAGVVAFSAMPALALNQIELQDKRVTNKE 73
Query: 233 GFDLIYEARDLDLPQNVREG----FTQARASLDETKKRVKESEARIDADLHVFIQNSYWT 400
G LIYEARDL++ ++ R+ F + + ++TK R ES RI+ D+ +++ +YW+
Sbjct: 74 GLQLIYEARDLNIAESTRQDGPSRFAFQKLNSNQTKARATESLNRINKDVPEYVEKAYWS 133
Query: 401 EAREQLRR 424
+A +LRR
Sbjct: 134 QAGMELRR 141
[8][TOP]
>UniRef100_A4S8C8 PsbQ, PSII-Q, OEE3, photosystem II polypeptide, oxygen evolving
enhancer 3 n=1 Tax=Ostreococcus lucimarinus CCE9901
RepID=A4S8C8_OSTLU
Length = 204
Score = 71.6 bits (174), Expect = 2e-11
Identities = 49/133 (36%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Frame = +2
Query: 38 ALASKVATRPAVASRRGAVVVRASGESRRAVLGGLLASAVAAVAPKAALALTPVDLFDDR 217
A+A K+ T +V + VV+AS + +AV + + V + P AA A T ++L D R
Sbjct: 14 AIAQKITTSKSVKAN---TVVKAS--ANKAVSLAAVTAVVLSATP-AAFAATGIELTDKR 67
Query: 218 SVRDRGFDLIYEARDLDLPQNVREG----FTQARASLDETKKRVKESEARIDADLHVFIQ 385
G LIYEARDL+L Q R F+ + S ET R ES RI+ D+ ++
Sbjct: 68 VENQTGLQLIYEARDLELDQKPRSDGPSRFSFQKLSQKETAARATESVTRINKDVGEYVG 127
Query: 386 NSYWTEAREQLRR 424
YWT+A +LRR
Sbjct: 128 KKYWTQASNELRR 140
[9][TOP]
>UniRef100_UPI0000383963 COG0513: Superfamily II DNA and RNA helicases n=1
Tax=Magnetospirillum magnetotacticum MS-1
RepID=UPI0000383963
Length = 551
Score = 61.6 bits (148), Expect = 3e-08
Identities = 47/127 (37%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Frame = -2
Query: 407 EPQSSRSSG*TRAGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRG 228
+P S + + T A + R P+ P RPG+R+ RG+ G G GRG R+ +RG
Sbjct: 416 QPPSRQEAQETAAEEARRPPRQPQ----GRPGQRQGRPGGRGQEGRGEGRGEHRAHEARG 471
Query: 227 REPSGHRTGRRGSEQGQPWGPR-RRQRSPADRPAPRGATRRRRAQPRHPGGRP---RRGG 60
P G + G R ++ GPR QRS RP G R + A+P+ GGRP RRG
Sbjct: 472 GRPGG-QPGHRQDQRQDSRGPRPDGQRSDQRRPERAGEGRPQGARPQ--GGRPNDGRRGD 528
Query: 59 *QP*RRG 39
+P R G
Sbjct: 529 ARPARSG 535
[10][TOP]
>UniRef100_UPI0000DC1A1B UPI0000DC1A1B related cluster n=1 Tax=Rattus norvegicus
RepID=UPI0000DC1A1B
Length = 491
Score = 59.3 bits (142), Expect = 1e-07
Identities = 54/144 (37%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Frame = -2
Query: 425 GGAAAREPQSSRSS-----G*TRAGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGP 264
G + +R PQ RS G +R+ QRR ++P R WSR + G S R G
Sbjct: 193 GHSRSRSPQWRRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 252
Query: 263 GRGPRRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRR 105
R P GRSR R P S RT RR S P R R R+PA R R T RR
Sbjct: 253 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRR 312
Query: 104 RAQPRHPGGRPRRGG*QP*RRGPS 33
R++ R P R R Q R G S
Sbjct: 313 RSRTRSPVRRRSRSRSQARRSGRS 336
[11][TOP]
>UniRef100_UPI0000DA333B PREDICTED: similar to serine/arginine repetitive matrix 2 n=1
Tax=Rattus norvegicus RepID=UPI0000DA333B
Length = 2707
Score = 59.3 bits (142), Expect = 1e-07
Identities = 54/144 (37%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Frame = -2
Query: 425 GGAAAREPQSSRSS-----G*TRAGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGP 264
G + +R PQ RS G +R+ QRR ++P R WSR + G S R G
Sbjct: 500 GHSRSRSPQWRRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 559
Query: 263 GRGPRRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRR 105
R P GRSR R P S RT RR S P R R R+PA R R T RR
Sbjct: 560 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRR 619
Query: 104 RAQPRHPGGRPRRGG*QP*RRGPS 33
R++ R P R R Q R G S
Sbjct: 620 RSRTRSPVRRRSRSRSQARRSGRS 643
[12][TOP]
>UniRef100_Q2IMJ3 LigA n=1 Tax=Anaeromyxobacter dehalogenans 2CP-C RepID=Q2IMJ3_ANADE
Length = 808
Score = 59.3 bits (142), Expect = 1e-07
Identities = 49/131 (37%), Positives = 57/131 (43%), Gaps = 9/131 (6%)
Frame = -2
Query: 425 GGAAAREPQSSRSSG*TRAGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRR 246
GGA A ++ R G RAG R G + RA + R R R+GAG GR R
Sbjct: 291 GGARAARGRAGRGGGGARAGHGRGGGRPRRRARRAGGRARAGRGRRRARAGAGRGRA--R 348
Query: 245 SGRSRGREPSGH------RTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHP 84
+G RGR + H R GRR G G R R+ A A RG R R R
Sbjct: 349 AGAGRGRRAARHGRGARRRGGRRARRAGGRAGGRARRAGRAGPGARRGRGARGRGPARRR 408
Query: 83 GG---RPRRGG 60
GG PRRGG
Sbjct: 409 GGGRRAPRRGG 419
[13][TOP]
>UniRef100_Q8BTI8-3 Isoform 3 of Serine/arginine repetitive matrix protein 2 n=1
Tax=Mus musculus RepID=Q8BTI8-3
Length = 2603
Score = 59.3 bits (142), Expect = 1e-07
Identities = 54/144 (37%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Frame = -2
Query: 425 GGAAAREPQSSRSS-----G*TRAGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGP 264
G + +R PQ RS G +R+ QRR ++P R WSR + G S R G
Sbjct: 501 GHSRSRSPQWRRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 560
Query: 263 GRGPRRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRR 105
R P GRSR R P S RT RR S P R R R+PA R R T RR
Sbjct: 561 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRR 620
Query: 104 RAQPRHPGGRPRRGG*QP*RRGPS 33
R++ R P R R Q R G S
Sbjct: 621 RSRTRSPVRRRSRSRSQARRSGRS 644
[14][TOP]
>UniRef100_Q8BTI8 Serine/arginine repetitive matrix protein 2 n=2 Tax=Mus musculus
RepID=SRRM2_MOUSE
Length = 2703
Score = 59.3 bits (142), Expect = 1e-07
Identities = 54/144 (37%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Frame = -2
Query: 425 GGAAAREPQSSRSS-----G*TRAGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGP 264
G + +R PQ RS G +R+ QRR ++P R WSR + G S R G
Sbjct: 501 GHSRSRSPQWRRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 560
Query: 263 GRGPRRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRR 105
R P GRSR R P S RT RR S P R R R+PA R R T RR
Sbjct: 561 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPTRR 620
Query: 104 RAQPRHPGGRPRRGG*QP*RRGPS 33
R++ R P R R Q R G S
Sbjct: 621 RSRTRSPVRRRSRSRSQARRSGRS 644
[15][TOP]
>UniRef100_UPI0000484FB6 serine/arginine repetitive matrix 2 n=2 Tax=Mus musculus
RepID=UPI0000484FB6
Length = 2703
Score = 58.9 bits (141), Expect = 2e-07
Identities = 55/148 (37%), Positives = 67/148 (45%), Gaps = 17/148 (11%)
Frame = -2
Query: 425 GGAAAREPQSSRSS-----G*TRAGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGP 264
G + +R PQ RS G +R+ QRR ++P R WSR + G S R G
Sbjct: 501 GHSRSRSPQWRRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 560
Query: 263 GRGPRRSGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR--- 111
R P GRSR R P+ R GR S P R R R+PA R PA RG +R
Sbjct: 561 SRSPATRGRSRSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRT 616
Query: 110 --RRRAQPRHPGGRPRRGG*QP*RRGPS 33
RRR++ R P R R Q R G S
Sbjct: 617 PARRRSRTRSPVRRRSRSRSQARRSGRS 644
[16][TOP]
>UniRef100_Q3TR34 Putative uncharacterized protein (Fragment) n=1 Tax=Mus musculus
RepID=Q3TR34_MOUSE
Length = 493
Score = 57.8 bits (138), Expect = 4e-07
Identities = 51/138 (36%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Frame = -2
Query: 410 REPQSSRSSG*TRAGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGPGRGPRRSGRS 234
R +S++ G +R+ QRR ++P R WSR + G S R G R P GRS
Sbjct: 205 RRSRSAQRWGKSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 264
Query: 233 RGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR-----RRRAQPRH 87
R R P+ R GR S P R R R+PA R PA RG +R RRR++ R
Sbjct: 265 RSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTPARRRSRTRS 320
Query: 86 PGGRPRRGG*QP*RRGPS 33
P R R Q R G S
Sbjct: 321 PVRRRSRSRSQARRSGRS 338
[17][TOP]
>UniRef100_Q9UQ39 RNA binding protein (Fragment) n=1 Tax=Homo sapiens
RepID=Q9UQ39_HUMAN
Length = 956
Score = 57.4 bits (137), Expect = 5e-07
Identities = 50/133 (37%), Positives = 60/133 (45%), Gaps = 13/133 (9%)
Frame = -2
Query: 425 GGAAAREPQSSRSS-----G*TRAGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGP 264
G + +R PQ RS G +R+ QRR ++P R WSR + G S R G
Sbjct: 469 GHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 528
Query: 263 GRGPRRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRR 105
R P GRSR R P S RT RR S P R R R+PA R R T RR
Sbjct: 529 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARR 588
Query: 104 RAQPRHPGGRPRR 66
R++ R P R R
Sbjct: 589 RSRTRSPVRRRSR 601
Score = 54.3 bits (129), Expect = 4e-06
Identities = 49/131 (37%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Frame = -2
Query: 413 AREPQSSRSSG*TRAGQRRCGPQTPSRA---SWSRPGKREPG*SPRGRSGAGPGRGPRRS 243
+R P RS T A + R +TP+R + S +R SP RSG R P R
Sbjct: 561 SRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 620
Query: 242 GRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGRPRR 66
GRSR R P+ R GR S R R R+PA R R T RR R++ R R R
Sbjct: 621 GRSRSRTPA--RRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRS 678
Query: 65 GG*QP*RRGPS 33
P RRG S
Sbjct: 679 HSRTPQRRGRS 689
[18][TOP]
>UniRef100_Q9UQ35-2 Isoform 2 of Serine/arginine repetitive matrix protein 2 n=1
Tax=Homo sapiens RepID=Q9UQ35-2
Length = 2334
Score = 57.4 bits (137), Expect = 5e-07
Identities = 50/133 (37%), Positives = 60/133 (45%), Gaps = 13/133 (9%)
Frame = -2
Query: 425 GGAAAREPQSSRSS-----G*TRAGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGP 264
G + +R PQ RS G +R+ QRR ++P R WSR + G S R G
Sbjct: 504 GHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 563
Query: 263 GRGPRRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRR 105
R P GRSR R P S RT RR S P R R R+PA R R T RR
Sbjct: 564 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARR 623
Query: 104 RAQPRHPGGRPRR 66
R++ R P R R
Sbjct: 624 RSRTRSPVRRRSR 636
Score = 54.3 bits (129), Expect = 4e-06
Identities = 49/131 (37%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Frame = -2
Query: 413 AREPQSSRSSG*TRAGQRRCGPQTPSRA---SWSRPGKREPG*SPRGRSGAGPGRGPRRS 243
+R P RS T A + R +TP+R + S +R SP RSG R P R
Sbjct: 596 SRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 655
Query: 242 GRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGRPRR 66
GRSR R P+ R GR S R R R+PA R R T RR R++ R R R
Sbjct: 656 GRSRSRTPA--RRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRS 713
Query: 65 GG*QP*RRGPS 33
P RRG S
Sbjct: 714 HSRTPQRRGRS 724
[19][TOP]
>UniRef100_Q9UQ35 Serine/arginine repetitive matrix protein 2 n=1 Tax=Homo sapiens
RepID=SRRM2_HUMAN
Length = 2752
Score = 57.4 bits (137), Expect = 5e-07
Identities = 50/133 (37%), Positives = 60/133 (45%), Gaps = 13/133 (9%)
Frame = -2
Query: 425 GGAAAREPQSSRSS-----G*TRAGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGP 264
G + +R PQ RS G +R+ QRR ++P R WSR + G S R G
Sbjct: 504 GHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 563
Query: 263 GRGPRRSGRSRGREP-----SGHRT-GRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRR 105
R P GRSR R P S RT RR S P R R R+PA R R T RR
Sbjct: 564 SRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARR 623
Query: 104 RAQPRHPGGRPRR 66
R++ R P R R
Sbjct: 624 RSRTRSPVRRRSR 636
Score = 54.3 bits (129), Expect = 4e-06
Identities = 49/131 (37%), Positives = 59/131 (45%), Gaps = 4/131 (3%)
Frame = -2
Query: 413 AREPQSSRSSG*TRAGQRRCGPQTPSRA---SWSRPGKREPG*SPRGRSGAGPGRGPRRS 243
+R P RS T A + R +TP+R + S +R SP RSG R P R
Sbjct: 596 SRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 655
Query: 242 GRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGAT-RRRRAQPRHPGGRPRR 66
GRSR R P+ R GR S R R R+PA R R T RR R++ R R R
Sbjct: 656 GRSRSRTPA--RRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRS 713
Query: 65 GG*QP*RRGPS 33
P RRG S
Sbjct: 714 HSRTPQRRGRS 724
[20][TOP]
>UniRef100_UPI00015558E9 PREDICTED: similar to splicing coactivator subunit SRm300, partial
n=1 Tax=Ornithorhynchus anatinus RepID=UPI00015558E9
Length = 2677
Score = 56.6 bits (135), Expect = 8e-07
Identities = 52/153 (33%), Positives = 66/153 (43%), Gaps = 24/153 (15%)
Frame = -2
Query: 425 GGAAAREPQSSRSS-----G*TRAGQRRCGPQTPSRASWSRPGK-----REPG*SPRGRS 276
G + +R PQ RS G +R+ QRR ++P R WSR R + RGRS
Sbjct: 385 GRSRSRTPQWRRSRSPQRWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGRSRSTARRGRS 444
Query: 275 --------GAGPGRGPRRSGRSRGREPSGHR------TGRRGSEQGQPWGPRRRQRSPAD 138
G R P R GRSR R P+ R T RR + R R R+PA
Sbjct: 445 RSKTPATRGRSRSRTPARRGRSRSRTPTRRRSRSRTSTRRRSRSRTPTRRGRSRSRTPAR 504
Query: 137 RPAPRGATRRRRAQPRHPGGRPRRGG*QP*RRG 39
R + + RRR++ R P R R P RRG
Sbjct: 505 RRSRTRSPVRRRSRTRSPVRRGRSRSRTPARRG 537
[21][TOP]
>UniRef100_UPI000179CC90 UPI000179CC90 related cluster n=1 Tax=Bos taurus
RepID=UPI000179CC90
Length = 2724
Score = 56.6 bits (135), Expect = 8e-07
Identities = 51/137 (37%), Positives = 63/137 (45%), Gaps = 17/137 (12%)
Frame = -2
Query: 425 GGAAAREPQSSRSS-----G*TRAGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGP 264
G + +R PQ RS G +R+ QRR ++P R WSR + G S R G
Sbjct: 500 GHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNAQRRGRSRSARRGRSH 559
Query: 263 GRGPRRSGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR--- 111
R P GRSR R P+ R GR S P R R R+PA R PA RG +R
Sbjct: 560 SRSPATRGRSRSRTPA--RRGR--SRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRT 615
Query: 110 --RRRAQPRHPGGRPRR 66
RRR++ R P R R
Sbjct: 616 PARRRSRTRSPVRRRSR 632
[22][TOP]
>UniRef100_B8A1Z2 Putative uncharacterized protein n=1 Tax=Zea mays
RepID=B8A1Z2_MAIZE
Length = 262
Score = 56.6 bits (135), Expect = 8e-07
Identities = 46/126 (36%), Positives = 56/126 (44%), Gaps = 5/126 (3%)
Frame = -2
Query: 425 GGAAAREP--QSSRSSG*TRAGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGP 252
GG P + R +G G R + P R + R +R+PG PRG GAGPGR
Sbjct: 73 GGGRPLHPLRRDRRGAGRGGGGPGRGAARPPRRDAQQRRHQRQPGAGPRG--GAGPGRLR 130
Query: 251 RRSGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRR---RRAQPRHPG 81
R GR R R G + RG+ G P PRR+ R R G R +R Q R G
Sbjct: 131 PRHGRERPRRGGGRQA--RGARHGAP--PRRQHRVHGQRGRRAGRRRAAALQRVQGRRAG 186
Query: 80 GRPRRG 63
RRG
Sbjct: 187 PGARRG 192
[23][TOP]
>UniRef100_UPI0000F2DB84 PREDICTED: similar to splicing coactivator subunit SRm300 n=1
Tax=Monodelphis domestica RepID=UPI0000F2DB84
Length = 2785
Score = 56.2 bits (134), Expect = 1e-06
Identities = 54/145 (37%), Positives = 65/145 (44%), Gaps = 16/145 (11%)
Frame = -2
Query: 425 GGAAAREPQSSRSS-----G*TRAGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPG 261
G + +R PQ RS G +R+ QRR ++P R WSR R R RS A G
Sbjct: 512 GRSRSRTPQWRRSRSPQRWGRSRSPQRRGRSRSPQRPGWSR--SRNAQRRGRSRSAARRG 569
Query: 260 RGPRRSGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR---- 111
R RS +RGR S R S P R R R+PA R PA RG +R
Sbjct: 570 RSRSRSPATRGRSRSRTPARRGRSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRTP 629
Query: 110 -RRRAQPRHPGGRPRRGG*QP*RRG 39
RRR++ R P R R P RRG
Sbjct: 630 ARRRSRTRSPVRRRSRTR-SPARRG 653
[24][TOP]
>UniRef100_Q21155 Rnp (Rrm rna binding domain) containing protein 5, confirmed by
transcript evidence n=1 Tax=Caenorhabditis elegans
RepID=Q21155_CAEEL
Length = 289
Score = 56.2 bits (134), Expect = 1e-06
Identities = 44/115 (38%), Positives = 55/115 (47%), Gaps = 5/115 (4%)
Frame = -2
Query: 419 AAAREPQSSRSSG*TRAGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPR-RS 243
A + SS SSG + +G G ++ S +S R R SPR R P RG R RS
Sbjct: 11 ARSSSSSSSSSSGSSSSGSSSSGSRSSSSSSSGRSRSR----SPRRRDTRPPARGGRSRS 66
Query: 242 GRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPA----DRPAPRGATRRRRAQPR 90
RG P G R R + P PRRR+ SP+ DR G+ +RRRA PR
Sbjct: 67 PIRRGSPPRGARADRDRPMRPSPSPPRRRRPSPSPPRRDRRDRSGSRQRRRASPR 121
[25][TOP]
>UniRef100_C9WHI4 Circumsporozoite protein (Fragment) n=1 Tax=Plasmodium vivax
RepID=C9WHI4_PLAVI
Length = 288
Score = 56.2 bits (134), Expect = 1e-06
Identities = 42/122 (34%), Positives = 51/122 (41%)
Frame = -2
Query: 425 GGAAAREPQSSRSSG*TRAGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRR 246
G AA +P R+ G AG R G RA+ G R G P G GAG G R
Sbjct: 68 GDRAAGQPAGDRADG-QPAGDRAAGQPAGDRAAGHPAGDRADG-QPAGDRGAGQPAGDRA 125
Query: 245 SGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGRPRR 66
+G+ G GH G R + GQP G R + DR A + A R QP G +
Sbjct: 126 AGQPAGDRADGHPAGDRAA--GQPAGDRAAGQPAGDRAAGQPAGDRAAGQPAGNGAGGQA 183
Query: 65 GG 60
G
Sbjct: 184 AG 185
[26][TOP]
>UniRef100_UPI000184A2B2 Serine/arginine repetitive matrix protein 2 (Serine/arginine-rich
splicing factor-related nuclear matrix protein of 300
kDa) (Ser/Arg- related nuclear matrix protein)
(SR-related nuclear matrix protein of 300 kDa) (Splicing
coactivator subunit SRm300) (30 n=1 Tax=Canis lupus
familiaris RepID=UPI000184A2B2
Length = 2682
Score = 55.8 bits (133), Expect = 1e-06
Identities = 50/135 (37%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Frame = -2
Query: 413 AREPQSSRSSG*TRAGQRRCGPQTPSRA---SWSRPGKREPG*SPRGRSGAGPGRGPRRS 243
+R P RS T A + R +TP+R + S +R SP RSG R P R
Sbjct: 528 SRTPARRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 587
Query: 242 GRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATR-----RRRAQPRHPGG 78
GRSR R P+ RRG + + P RR RS + PA RG +R RRR++ R
Sbjct: 588 GRSRSRTPA-----RRGRSRSRT--PARRGRSRSRTPARRGRSRSRTPARRRSRSRSVVR 640
Query: 77 RPRRGG*QP*RRGPS 33
R R P RRG S
Sbjct: 641 RGRSHSRTPQRRGRS 655
Score = 55.1 bits (131), Expect = 2e-06
Identities = 49/137 (35%), Positives = 61/137 (44%), Gaps = 17/137 (12%)
Frame = -2
Query: 425 GGAAAREPQSSRSS-----G*TRAGQRRCGPQTPSRASWSRP-GKREPG*SPRGRSGAGP 264
G + +R PQ RS G +R+ QRR ++P R WSR + G S R G
Sbjct: 436 GHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSH 495
Query: 263 GRGPRRSGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADR------PAPRGATR--- 111
R P GRSR R P+ R S P R R R+PA R PA RG +R
Sbjct: 496 SRSPATRGRSRSRTPAR----RARSRSRTPARRRSRSRTPARRRSRSRTPARRGRSRSRT 551
Query: 110 --RRRAQPRHPGGRPRR 66
RRR++ R P R R
Sbjct: 552 PARRRSRTRSPVRRRSR 568
[27][TOP]
>UniRef100_P39881 Homeobox protein cut-like 1 (Fragment) n=1 Tax=Canis lupus familiaris
RepID=CUX1_CANFA
Length = 975
Score = 55.5 bits (132), Expect = 2e-06
Identities = 50/146 (34%), Positives = 61/146 (41%), Gaps = 16/146 (10%)
Frame = -2
Query: 425 GGAAAREPQSSRSSG*TRAGQRRC--------GP-------QTPSRASWSRPGKREPG*S 291
G A AR S+RSSG + + GP P+ A+ S+ G E +
Sbjct: 754 GQAGARHSPSARSSGAAPSSEGDSCDGVEAAEGPGAADAEESAPAAAAKSQGGPAEAAVA 813
Query: 290 PRGRSGAGPGRGPRRSGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRG-AT 114
P R A P +RS R RG P R G G G P P R P+ RP R
Sbjct: 814 PEEREEA-PRPAEKRSRRPRGPGPGPGRRGGGGPAPGAPAAPAAAARGPSRRPGARAKPR 872
Query: 113 RRRRAQPRHPGGRPRRGG*QP*RRGP 36
RRRR + RH G RR +P R GP
Sbjct: 873 RRRRRRRRHARGGGRRYLSRPARGGP 898
[28][TOP]
>UniRef100_B4VB08 Polyketide synthase type I n=1 Tax=Streptomyces sp. Mg1
RepID=B4VB08_9ACTO
Length = 1612
Score = 55.1 bits (131), Expect = 2e-06
Identities = 40/92 (43%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Frame = -2
Query: 335 RASWSRPGKR-EPG*SPRGRSGAGPGRGPRRSGRSRGREPSGHRTGRRGSEQGQPWGPRR 159
R + PG+R +P GR+ GPG P R R+ G P HR R G+ + +P G RR
Sbjct: 1491 RMDEAAPGRRRDPRRRAVGRTRRGPGGVPHRR-RTAGAPPRPHRAAR-GTRRRRP-GTRR 1547
Query: 158 RQRSPADRPAPRGATRRRRAQPRHPGGRPRRG 63
R R PA R PR R RR R PG RPR+G
Sbjct: 1548 RGR-PAVRDGPRRRPRGRRPDRRPPGARPRQG 1578
[29][TOP]
>UniRef100_UPI0000F2C98A PREDICTED: similar to CG9434-PA n=1 Tax=Monodelphis domestica
RepID=UPI0000F2C98A
Length = 412
Score = 54.7 bits (130), Expect = 3e-06
Identities = 46/130 (35%), Positives = 56/130 (43%), Gaps = 2/130 (1%)
Frame = -2
Query: 422 GAAAREPQSSRSSG*TRAGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRS 243
G A R + R G R R +P A W RP SPRG + PG R S
Sbjct: 116 GLAPRGAEQPRPRGAERPRPRGTNRPSPRGAGWPRPRGAGRS-SPRGANWPSPGEAERPS 174
Query: 242 -GRSRGREPSG-HRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRRRAQPRHPGGRPR 69
G + P G +R RG+EQ +P G R + +RP+PRGA R PR G
Sbjct: 175 PGGAEWPRPRGTNRPSPRGAEQPRPRGAERPRPRGTNRPSPRGAGWPR---PRGAGRSSP 231
Query: 68 RGG*QP*RRG 39
RG P RG
Sbjct: 232 RGANWPSPRG 241
[30][TOP]
>UniRef100_UPI00015DEFCE predicted gene, EG381818 n=1 Tax=Mus musculus RepID=UPI00015DEFCE
Length = 446
Score = 54.7 bits (130), Expect = 3e-06
Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 7/107 (6%)
Frame = -2
Query: 353 GPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSG---HRTGRRGSEQ 183
GPQ+P R ++ G PG P+G GP + P + G +G P G R + G++Q
Sbjct: 100 GPQSPPRPG-TQQGPPPPGPPPQG----GPQQRPPQPGNQQGPPPQGGHQQRPPQPGNQQ 154
Query: 182 GQP--WGPRRRQRSPADR--PAPRGATRRRRAQPRHPGGRPRRGG*Q 54
G P GP++R P ++ P P+G ++R QP + G P +GG Q
Sbjct: 155 GPPPQGGPQQRTPQPGNQQGPPPQGGPQQRPPQPGNQQGPPPQGGPQ 201
[31][TOP]
>UniRef100_B4V2Y2 Putative uncharacterized protein n=1 Tax=Streptomyces sp. Mg1
RepID=B4V2Y2_9ACTO
Length = 576
Score = 54.3 bits (129), Expect = 4e-06
Identities = 54/149 (36%), Positives = 62/149 (41%), Gaps = 25/149 (16%)
Frame = -2
Query: 413 AREPQSSRSSG*TRAGQRRCGPQTPSRASWSRPGKREPG*S-----PRGRSGAGP-GRGP 252
A PQ R++ R R P P A RPG+R PG + P+G GP G P
Sbjct: 14 AARPQPGRAA---RPPHRVRLPGLPPPAPPLRPGERHPGHAVHRSPPQGAPRTGPRGTRP 70
Query: 251 RRSGRSRGREPSGHRTGRRGSEQGQPWGPRR----------------RQRSPADRPAPRG 120
R+G R R P GRR +G GPRR R+R RPA R
Sbjct: 71 GRAGAPRRRRPRP-ALGRRAPARGHRPGPRRQALAAALRRADRQSGLRERRLRARPAGRA 129
Query: 119 ATR---RRRAQPRHPGGRPRRGG*QP*RR 42
A R RRR PR G RPR P RR
Sbjct: 130 ARRRDDRRRHHPRPRGRRPRPPDGHPPRR 158
[32][TOP]
>UniRef100_B5H4G2 Non-ribosomal peptide synthetase n=1 Tax=Streptomyces
pristinaespiralis ATCC 25486 RepID=B5H4G2_STRPR
Length = 3622
Score = 53.9 bits (128), Expect = 5e-06
Identities = 56/165 (33%), Positives = 64/165 (38%), Gaps = 28/165 (16%)
Frame = -2
Query: 422 GAAAREPQSSRSSG*TRAGQRRCG------PQTPSRASWSRPGKREPG*SPRGRSGAGPG 261
G P+ SR +G RR P P R R+P GR
Sbjct: 2923 GGQGPRPRLSRQAGPDLGAVRRRPVRTARQPDVPHRRPRPLAQGRQPRLPGPGRHAGEDP 2982
Query: 260 RGPRRSGRSRG--REPSGHRTGRRGSE-QGQPWGPRRRQRS---PADR------------ 135
R P R+GR RG R P G R GRRG+ QG+ P R +R P DR
Sbjct: 2983 RLPYRTGRDRGGSRGPCGGRPGRRGARPQGRHRAPGRLRRPGERPRDRDRHRARHRPRIR 3042
Query: 134 ---PAPRGATR-RRRAQPRHPGGRPRRGG*QP*RRGPSLLLG*SG 12
P P GA R RRRA R G RPRR +P P G G
Sbjct: 3043 PRCPRPAGAARARRRAAARVHGARPRRTAGRPAAADPQRQAGPQG 3087
[33][TOP]
>UniRef100_UPI00015FBA1A pseudogene n=1 Tax=Sorangium cellulosum 'So ce 56'
RepID=UPI00015FBA1A
Length = 1848
Score = 53.5 bits (127), Expect = 7e-06
Identities = 51/138 (36%), Positives = 56/138 (40%), Gaps = 6/138 (4%)
Frame = -2
Query: 422 GAAAREPQSSRSSG*TRAGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRG---- 255
GA R P R R G RR P+ R + RP R G +P + GPGR
Sbjct: 1063 GARGRLPLPRRRR---RPGHRRGAPR--DRRALVRPPARAAGAAPGPAARLGPGRPRAAR 1117
Query: 254 PRRSGRSRGREPSGHRTGRRGSEQGQPWGPRRRQRSPADRPAPRGATRRR-RAQPRHPGG 78
RR R RGR P PRRR RP G RRR R PR G
Sbjct: 1118 DRRPARGRGRSPL----------------PRRRPLDARPRPPAAGRGRRRGRGAPRSAPG 1161
Query: 77 RPRRG-G*QP*RRGPSLL 27
RPRRG G +P RR L
Sbjct: 1162 RPRRGPGARPARRADRAL 1179
[34][TOP]
>UniRef100_Q1GSH7 Kinesin K39, putative n=1 Tax=Sphingopyxis alaskensis
RepID=Q1GSH7_SPHAL
Length = 583
Score = 53.1 bits (126), Expect = 9e-06
Identities = 37/92 (40%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = -2
Query: 377 TRAGQRRCGPQTPSRASWSRPGKREPG*SPRGRSGAGPGRGPRRSGRSRGREPSGHRTGR 198
TRAG RCG + S R G R R+GAG GR RR GRS G GR
Sbjct: 178 TRAGAARCGVRDDRTTSDRRAGAR--------RAGAGAGRDARRQGRSIRVSSCGTGAGR 229
Query: 197 RGSEQGQPWGPRRRQRSPA---DRPAPRGATR 111
G+++ + W RR +R A R A RGA R
Sbjct: 230 AGADRRRTWPDRRGRRGGAASNRRGAARGAAR 261
[35][TOP]
>UniRef100_C4RIQ4 ATPase n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RIQ4_9ACTO
Length = 832
Score = 53.1 bits (126), Expect = 9e-06
Identities = 54/139 (38%), Positives = 58/139 (41%), Gaps = 19/139 (13%)
Frame = -2
Query: 419 AAAREPQSSRSSG*TRAGQRRCGPQTPSRASWSRPGKREPG*SPR-GRSGAGPG---RGP 252
A AR P G RA QRRC P R RPG+ G R G GPG RGP
Sbjct: 80 APARRPGPGGRRGIGRAAQRRCDRGGPGRRVPDRPGRGPAGHHRRPGADLPGPGQVRRGP 139
Query: 251 RRSGRSRGREPSGHRTGRRG---------SEQGQPWGPRR-RQRSPADR----PAPRGAT 114
R R R + G R G R + Q QP RR R R DR PA RG
Sbjct: 140 DRQ-RPRREDRPGDRPGLRDPSRHPGVVPAYQEQPGADRRARCRQDGDRRGPGPADRGRR 198
Query: 113 RRRRAQPRHPG-GRPRRGG 60
R R A + G RPRR G
Sbjct: 199 RARVAARQEAGFARPRRDG 217