AV634980 ( HC040d07_r )

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[1][TOP]
>UniRef100_A8J8B2 Plastid-specific ribosomal protein 1 n=1 Tax=Chlamydomonas
           reinhardtii RepID=A8J8B2_CHLRE
          Length = 286

 Score =  289 bits (739), Expect = 1e-76
 Identities = 150/150 (100%), Positives = 150/150 (100%)
 Frame = +1

Query: 79  MALTLHQQRMAQIACRQQASGRVSVRPVLQLASTRVPVPYGPNMAVVATRPARSGLVVRA 258
           MALTLHQQRMAQIACRQQASGRVSVRPVLQLASTRVPVPYGPNMAVVATRPARSGLVVRA
Sbjct: 1   MALTLHQQRMAQIACRQQASGRVSVRPVLQLASTRVPVPYGPNMAVVATRPARSGLVVRA 60

Query: 259 QSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGT 438
           QSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGT
Sbjct: 61  QSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGT 120

Query: 439 HGKKEQKVEVTIYTLRNGVVRVEDAENNLY 528
           HGKKEQKVEVTIYTLRNGVVRVEDAENNLY
Sbjct: 121 HGKKEQKVEVTIYTLRNGVVRVEDAENNLY 150

[2][TOP]
>UniRef100_Q5MCR1 Chloroplast-specific ribosome-associated protein n=1 Tax=Volvox
           carteri f. nagariensis RepID=Q5MCR1_VOLCA
          Length = 232

 Score =  174 bits (442), Expect = 3e-42
 Identities = 104/157 (66%), Positives = 118/157 (75%), Gaps = 7/157 (4%)
 Frame = +1

Query: 79  MALTLHQQRMAQIACRQQA---SGRVSVRPVLQLASTRVPVPY----GPNMAVVATRPAR 237
           MAL L QQ++A   C+++A    G V  RP +  ASTR P  +    G    V A RP+R
Sbjct: 1   MALLL-QQQVAHGLCKKRAVGPCGAVLHRPCVTPASTRPPSTFQSVEGLAPVVGAGRPSR 59

Query: 238 SGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSA 417
           SG VV A  A   A TVRIIIQGRKLPVT+AIK YVEEKVAKA+ NF+HTLKEVDVTLSA
Sbjct: 60  SGFVVHA--AAKTASTVRIIIQGRKLPVTNAIKEYVEEKVAKAIQNFAHTLKEVDVTLSA 117

Query: 418 RGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLY 528
           RGGDTGTHGKKEQKV+VTI+TLRNGVVRVED E+NLY
Sbjct: 118 RGGDTGTHGKKEQKVDVTIFTLRNGVVRVEDRESNLY 154

[3][TOP]
>UniRef100_P19954 30S ribosomal protein 1, chloroplastic n=1 Tax=Spinacia oleracea
           RepID=RR30_SPIOL
          Length = 302

 Score = 89.0 bits (219), Expect = 2e-16
 Identities = 48/110 (43%), Positives = 74/110 (67%)
 Frame = +1

Query: 199 GPNMAVVATRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANF 378
           G N+AV + + +R+   V   S      +V++I+QGR L V+D ++ +VE+KV K+VA  
Sbjct: 46  GLNVAVKSVQISRNKPNVVCMSWDGPLSSVKLILQGRNLEVSDNVRSHVEDKVGKSVAKH 105

Query: 379 SHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLY 528
           SH ++EVDV LSARGGD  + G K ++ EVT++T R+GV+R E+   +LY
Sbjct: 106 SHLVREVDVRLSARGGDL-SKGPKLRRCEVTLFTKRHGVIRAEEDAESLY 154

[4][TOP]
>UniRef100_A9TA00 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9TA00_PHYPA
          Length = 297

 Score = 88.2 bits (217), Expect = 3e-16
 Identities = 48/95 (50%), Positives = 66/95 (69%), Gaps = 3/95 (3%)
 Frame = +1

Query: 253 RAQSAKAAAGT---VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARG 423
           R  +  A  GT   VR++IQG+ L +TDAIK YVEEKV  AV N S  +KEVDV +S RG
Sbjct: 74  RVTTCMAWGGTLAGVRLVIQGKHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRG 133

Query: 424 GDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLY 528
           G+TG  G++ Q+ EVT++T ++GVVR E+   ++Y
Sbjct: 134 GETG-RGERLQRCEVTLFTKKHGVVRAEEEAESMY 167

[5][TOP]
>UniRef100_A9RWK9 Predicted protein n=1 Tax=Physcomitrella patens subsp. patens
           RepID=A9RWK9_PHYPA
          Length = 221

 Score = 87.8 bits (216), Expect = 4e-16
 Identities = 46/85 (54%), Positives = 61/85 (71%)
 Frame = +1

Query: 274 AAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKE 453
           A   VR++IQG+ L +TDAIK YVEEKV  AV N S  +KEVDV +S RGG+TG  G K 
Sbjct: 6   ALAGVRLVIQGKHLELTDAIKQYVEEKVGNAVHNQSALVKEVDVRMSVRGGETG-RGGKL 64

Query: 454 QKVEVTIYTLRNGVVRVEDAENNLY 528
           Q+ EVT++T ++GVVR E+   ++Y
Sbjct: 65  QRCEVTLFTKKHGVVRAEEEAESMY 89

[6][TOP]
>UniRef100_C1EFG3 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EFG3_9CHLO
          Length = 284

 Score = 83.6 bits (205), Expect = 8e-15
 Identities = 52/103 (50%), Positives = 71/103 (68%), Gaps = 2/103 (1%)
 Frame = +1

Query: 226 RPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANF-SHTLKEVD 402
           R A S  VV   S +A+A T ++I+QGR L +TD+I+ Y EEK+ KAVA+F  H ++EVD
Sbjct: 63  RAAGSNRVV--VSVEASAST-KVIVQGRHLEITDSIREYAEEKINKAVAHFDQHDVREVD 119

Query: 403 VTLSARGG-DTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLY 528
           V  S+RGG D  T G   QK EVT+YT RNG++R E+  ++LY
Sbjct: 120 VRCSSRGGADKKTPGGALQKTEVTVYT-RNGIIRSEEEADDLY 161

[7][TOP]
>UniRef100_B9I297 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9I297_POPTR
          Length = 306

 Score = 83.2 bits (204), Expect = 1e-14
 Identities = 49/115 (42%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
 Frame = +1

Query: 199 GPNMAVVAT-RPARSGLVVRAQSAKAA----AGTVRIIIQGRKLPVTDAIKLYVEEKVAK 363
           G NM+ +   R AR+ L     S K +      +V++IIQG+ L +TD +K +VE+KV K
Sbjct: 52  GKNMSFIELGRTARTPLTHGGCSVKMSWDGPLHSVKLIIQGKNLELTDTVKRHVEDKVGK 111

Query: 364 AVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLY 528
           AV   SH ++EVDV LS RGG+ G  G + ++ EVT++T R+GVVR E+    +Y
Sbjct: 112 AVQKHSHLVREVDVRLSVRGGELG-KGPRIRRCEVTLFTNRHGVVRAEEDAETIY 165

[8][TOP]
>UniRef100_C6TFU4 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6TFU4_SOYBN
          Length = 208

 Score = 82.8 bits (203), Expect = 1e-14
 Identities = 40/82 (48%), Positives = 58/82 (70%)
 Frame = +1

Query: 283 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 462
           +V++IIQG+ L +TDA+K +VE+KV KAV   SH ++EVDV LS RGG     G + ++ 
Sbjct: 69  SVKLIIQGKNLELTDAVKRHVEDKVGKAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRC 128

Query: 463 EVTIYTLRNGVVRVEDAENNLY 528
           EVT++T R+GVVR E+   + Y
Sbjct: 129 EVTLFTKRHGVVRAEEDAESTY 150

[9][TOP]
>UniRef100_UPI0001984F94 PREDICTED: hypothetical protein n=1 Tax=Vitis vinifera
           RepID=UPI0001984F94
          Length = 298

 Score = 82.0 bits (201), Expect = 2e-14
 Identities = 46/103 (44%), Positives = 65/103 (63%)
 Frame = +1

Query: 220 ATRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEV 399
           AT      L VR  S      +V++I+QG+ L +TD ++ +VEEKV KAV   SH ++EV
Sbjct: 57  ATTRQTKPLAVR-MSWDGPLSSVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREV 115

Query: 400 DVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLY 528
           DV LS RGG+ G  G K ++ EVT++T ++GVVR E+    LY
Sbjct: 116 DVRLSIRGGELG-KGPKIRRCEVTLFTKKHGVVRAEEHAETLY 157

[10][TOP]
>UniRef100_B9SEK8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative n=1
           Tax=Ricinus communis RepID=B9SEK8_RICCO
          Length = 311

 Score = 82.0 bits (201), Expect = 2e-14
 Identities = 44/114 (38%), Positives = 68/114 (59%)
 Frame = +1

Query: 187 PVPYGPNMAVVATRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKA 366
           P+  G N+     +  R   V    S +    +V++I QG+ L +TD +K +VE+KV KA
Sbjct: 57  PLKLGSNVKYFENKRGRRSAV--RMSWEGPLSSVKLITQGKNLELTDTVKKHVEDKVGKA 114

Query: 367 VANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLY 528
           V   SH ++EVDV LS RGG+ G  G K ++ EVT++T ++GV+R E+    +Y
Sbjct: 115 VQKHSHLVREVDVRLSVRGGEFG-KGPKIRRCEVTLFTKKHGVIRAEEDAETIY 167

[11][TOP]
>UniRef100_A7QEV5 Chromosome chr16 scaffold_86, whole genome shotgun sequence n=1
           Tax=Vitis vinifera RepID=A7QEV5_VITVI
          Length = 230

 Score = 81.6 bits (200), Expect = 3e-14
 Identities = 40/82 (48%), Positives = 59/82 (71%)
 Frame = +1

Query: 283 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 462
           +V++I+QG+ L +TD ++ +VEEKV KAV   SH ++EVDV LS RGG+ G  G K ++ 
Sbjct: 9   SVKLILQGKNLELTDTVRSHVEEKVGKAVQKHSHLVREVDVRLSIRGGELG-KGPKIRRC 67

Query: 463 EVTIYTLRNGVVRVEDAENNLY 528
           EVT++T ++GVVR E+    LY
Sbjct: 68  EVTLFTKKHGVVRAEEHAETLY 89

[12][TOP]
>UniRef100_C6T7E3 Putative uncharacterized protein n=1 Tax=Glycine max
           RepID=C6T7E3_SOYBN
          Length = 291

 Score = 80.9 bits (198), Expect = 5e-14
 Identities = 39/82 (47%), Positives = 57/82 (69%)
 Frame = +1

Query: 283 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 462
           +V++ IQG+ L +TDA+K +VE+KV KAV   SH ++EVDV LS RGG     G + ++ 
Sbjct: 69  SVKLTIQGKNLELTDAVKQHVEDKVGKAVQKHSHLVREVDVRLSIRGGGEFGRGPRTRRC 128

Query: 463 EVTIYTLRNGVVRVEDAENNLY 528
           EVT++T R+GVVR E+   + Y
Sbjct: 129 EVTLFTKRHGVVRAEEDAESTY 150

[13][TOP]
>UniRef100_C9EFD1 Chloroplast ribosomal protein (Fragment) n=1 Tax=Solanum tuberosum
           RepID=C9EFD1_SOLTU
          Length = 280

 Score = 80.5 bits (197), Expect = 7e-14
 Identities = 39/82 (47%), Positives = 59/82 (71%)
 Frame = +1

Query: 283 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 462
           +V++I+QG+ L +T A+K YVEEK+ KAV   SH  +EVDV LS RGG+ G  G K ++ 
Sbjct: 56  SVKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGGELG-KGPKIRRC 114

Query: 463 EVTIYTLRNGVVRVEDAENNLY 528
           EVT++T ++GV+R E+   ++Y
Sbjct: 115 EVTLFTKKHGVIRAEEDAESIY 136

[14][TOP]
>UniRef100_Q672Q2 Chloroplast-specific ribosomal protein n=1 Tax=Solanum lycopersicum
           RepID=Q672Q2_SOLLC
          Length = 311

 Score = 80.1 bits (196), Expect = 9e-14
 Identities = 39/82 (47%), Positives = 59/82 (71%)
 Frame = +1

Query: 283 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 462
           +V++I+QG+ L +T A+K YVEEK+ KAV   SH  +EVDV LS RGG+ G  G K ++ 
Sbjct: 84  SVKLILQGKNLELTPAVKDYVEEKLGKAVQKHSHLAREVDVRLSVRGGELG-KGPKIRRC 142

Query: 463 EVTIYTLRNGVVRVEDAENNLY 528
           EVT++T ++GV+R E+   ++Y
Sbjct: 143 EVTLFTKKHGVIRAEEDGESIY 164

[15][TOP]
>UniRef100_B8LMC5 Putative uncharacterized protein n=1 Tax=Picea sitchensis
           RepID=B8LMC5_PICSI
          Length = 321

 Score = 79.7 bits (195), Expect = 1e-13
 Identities = 39/82 (47%), Positives = 58/82 (70%)
 Frame = +1

Query: 283 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 462
           +VR+IIQG+   +TDA+K Y+EEKV  AV   ++ ++EVDV LS RGG+ G  G K ++ 
Sbjct: 87  SVRLIIQGKNFQLTDAVKAYIEEKVGIAVQKHANLVREVDVRLSIRGGEVG-KGPKIRRC 145

Query: 463 EVTIYTLRNGVVRVEDAENNLY 528
           EVT++T ++GVVR E+    +Y
Sbjct: 146 EVTLFTKKHGVVRAEEEAETIY 167

[16][TOP]
>UniRef100_Q9FLV3 Similarity to ribosomal protein 30S subunit n=2 Tax=Arabidopsis
           thaliana RepID=Q9FLV3_ARATH
          Length = 365

 Score = 79.0 bits (193), Expect = 2e-13
 Identities = 43/98 (43%), Positives = 65/98 (66%)
 Frame = +1

Query: 235 RSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLS 414
           RS L V+  S      +V++IIQG+ L +++ IK +VEEKV K+V   SH ++EVDV LS
Sbjct: 123 RSSLAVK-MSWDGPLASVKLIIQGKNLELSEPIKQHVEEKVGKSVQKHSHLVREVDVRLS 181

Query: 415 ARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLY 528
            RGG+ G  G + ++ EVT++T ++GVVR E+    +Y
Sbjct: 182 VRGGEFG-KGPRIRRCEVTLFTKKHGVVRAEEDAETVY 218

[17][TOP]
>UniRef100_B6TYP8 Plastid-specific 30S ribosomal protein 1 n=1 Tax=Zea mays
           RepID=B6TYP8_MAIZE
          Length = 309

 Score = 77.4 bits (189), Expect = 6e-13
 Identities = 42/107 (39%), Positives = 68/107 (63%)
 Frame = +1

Query: 208 MAVVATRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHT 387
           +AV ATR  R  + VR  +      +VR+I+Q R   +++ +K ++E+KV +AV+   H 
Sbjct: 47  VAVDATRRRRVSVSVR-MAWDGPLSSVRLIMQSRNAKLSEKLKEHIEDKVGRAVSKHCHL 105

Query: 388 LKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLY 528
           ++EVDV LSARGG+ G  G K  + E+T++T R+GV+R E+   + Y
Sbjct: 106 VREVDVRLSARGGELG-RGPKTSRCEITLFTKRHGVLRAEEDAESTY 151

[18][TOP]
>UniRef100_Q84M68 Os03g0856500 protein n=3 Tax=Oryza sativa RepID=Q84M68_ORYSJ
          Length = 309

 Score = 77.0 bits (188), Expect = 8e-13
 Identities = 41/105 (39%), Positives = 64/105 (60%)
 Frame = +1

Query: 214 VVATRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLK 393
           ++A    RS  V    S      +VR+I+QGR + + + +K ++EEK  +AVA  S  +K
Sbjct: 57  LLAAESRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVK 116

Query: 394 EVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLY 528
           EVDV LSARGG+  + G K  + E+T++T R+GV+R E+   + Y
Sbjct: 117 EVDVRLSARGGEL-SRGPKICRCEITLFTKRHGVIRAEEDAESTY 160

[19][TOP]
>UniRef100_Q10AC8 Plastid-specific 30S ribosomal protein 1, chloroplast, putative,
           expressed n=1 Tax=Oryza sativa Japonica Group
           RepID=Q10AC8_ORYSJ
          Length = 241

 Score = 77.0 bits (188), Expect = 8e-13
 Identities = 41/105 (39%), Positives = 64/105 (60%)
 Frame = +1

Query: 214 VVATRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLK 393
           ++A    RS  V    S      +VR+I+QGR + + + +K ++EEK  +AVA  S  +K
Sbjct: 57  LLAAESRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVK 116

Query: 394 EVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLY 528
           EVDV LSARGG+  + G K  + E+T++T R+GV+R E+   + Y
Sbjct: 117 EVDVRLSARGGEL-SRGPKICRCEITLFTKRHGVIRAEEDAESTY 160

[20][TOP]
>UniRef100_C6YXL0 Protein kinase n=1 Tax=Oryza sativa Japonica Group
           RepID=C6YXL0_ORYSJ
          Length = 321

 Score = 77.0 bits (188), Expect = 8e-13
 Identities = 41/105 (39%), Positives = 64/105 (60%)
 Frame = +1

Query: 214 VVATRPARSGLVVRAQSAKAAAGTVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLK 393
           ++A    RS  V    S      +VR+I+QGR + + + +K ++EEK  +AVA  S  +K
Sbjct: 57  LLAAESRRSSAVSVRMSWDGPLSSVRLIMQGRNVKLNEKVKEHIEEKAGRAVAKHSQLVK 116

Query: 394 EVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLY 528
           EVDV LSARGG+  + G K  + E+T++T R+GV+R E+   + Y
Sbjct: 117 EVDVRLSARGGEL-SRGPKICRCEITLFTKRHGVIRAEEDAESTY 160

[21][TOP]
>UniRef100_A9PJW3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa x
           Populus deltoides RepID=A9PJW3_9ROSI
          Length = 268

 Score = 77.0 bits (188), Expect = 8e-13
 Identities = 38/82 (46%), Positives = 58/82 (70%)
 Frame = +1

Query: 283 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 462
           +V++IIQG+ L ++D +K +VE+KV KAV   SH ++ VDV LS RGG+ G  G + ++ 
Sbjct: 84  SVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGGELG-KGPRIRRC 142

Query: 463 EVTIYTLRNGVVRVEDAENNLY 528
           EVT++T R+GVVR E+    +Y
Sbjct: 143 EVTLFTKRHGVVRAEEDAETIY 164

[22][TOP]
>UniRef100_C5WRX8 Putative uncharacterized protein Sb01g000590 n=1 Tax=Sorghum
           bicolor RepID=C5WRX8_SORBI
          Length = 310

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 35/82 (42%), Positives = 59/82 (71%)
 Frame = +1

Query: 283 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 462
           +VR+I+QGR + ++D +K ++E+KV +AV+   H ++EVDV LSARGG+ G  G K  + 
Sbjct: 71  SVRLIMQGRNVKLSDKLKEHIEDKVGRAVSKHCHLVREVDVRLSARGGELG-RGPKTSRC 129

Query: 463 EVTIYTLRNGVVRVEDAENNLY 528
           E+T+++ R+GV+R E+   + Y
Sbjct: 130 EITLFSKRHGVLRAEEDAESTY 151

[23][TOP]
>UniRef100_C1N7A9 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
           RepID=C1N7A9_9CHLO
          Length = 245

 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 46/97 (47%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
 Frame = +1

Query: 250 VRAQSAKAAAGTVR---IIIQGRKLPVTDAIKLYVEEKVAKAVANFS-HTLKEVDVTLSA 417
           VRA  A+A A   +   +I+QGR L +T+AI+ Y E+K+ KAV++F  H ++EVDVT SA
Sbjct: 31  VRASGARAMAAPAKGTKVIVQGRHLEITEAIRDYCEQKINKAVSHFDMHDVREVDVTCSA 90

Query: 418 RGGDTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLY 528
           R       G   Q  +VT+YT RNGVVR E+  +NLY
Sbjct: 91  R--SEKQQGGDLQMTQVTVYT-RNGVVRSEEEADNLY 124

[24][TOP]
>UniRef100_B9IDE9 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9IDE9_POPTR
          Length = 231

 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 40/79 (50%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
 Frame = +1

Query: 283 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 462
           +V++IIQG+ L ++D +K +VE+KV KAV   SH ++ VDV LS RGG+ G  G + ++ 
Sbjct: 9   SVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGGELG-KGPRIRRC 67

Query: 463 EVTIYTLRNGVVRV-EDAE 516
           EVT++T R+GVVR  EDAE
Sbjct: 68  EVTLFTKRHGVVRAEEDAE 86

[25][TOP]
>UniRef100_A9PHY3 Putative uncharacterized protein n=1 Tax=Populus trichocarpa
           RepID=A9PHY3_POPTR
          Length = 306

 Score = 75.1 bits (183), Expect = 3e-12
 Identities = 40/79 (50%), Positives = 58/79 (73%), Gaps = 1/79 (1%)
 Frame = +1

Query: 283 TVRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKV 462
           +V++IIQG+ L ++D +K +VE+KV KAV   SH ++ VDV LS RGG+ G  G + ++ 
Sbjct: 84  SVKLIIQGKHLELSDTVKKHVEDKVGKAVQKSSHLVRGVDVRLSVRGGELG-KGPRIRRC 142

Query: 463 EVTIYTLRNGVVRV-EDAE 516
           EVT++T R+GVVR  EDAE
Sbjct: 143 EVTLFTKRHGVVRAEEDAE 161

[26][TOP]
>UniRef100_Q00W70 Chloroplast-specific ribosomal protein (ISS) n=1 Tax=Ostreococcus
           tauri RepID=Q00W70_OSTTA
          Length = 184

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
 Frame = +1

Query: 253 RAQSAKAAAGT-VRIIIQGRKLPVTDAIKLYVEEKVAKAVANF-SHTLKEVDVTLSARGG 426
           RA   KA+  T V++++QG  L +T AI  YV  K+ +A ++  S  ++EVDV  SARGG
Sbjct: 38  RAVQTKASTNTDVKMLVQGLHLEITPAIDEYVRSKIGRACSHVDSRDIREVDVRCSARGG 97

Query: 427 DTGTHGKKEQKVEVTIYTLRNGVVRVEDAENNLY 528
           + G+ G  E K EVT+   R   +  +    NLY
Sbjct: 98  E-GSKGGVEHKTEVTVLMTRGPTLHADGVGENLY 130

[27][TOP]
>UniRef100_Q2JIS4 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
           JA-2-3B'a(2-13) RepID=Q2JIS4_SYNJB
          Length = 190

 Score = 60.8 bits (146), Expect = 6e-08
 Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
 Frame = +1

Query: 289 RIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEV 468
           +++IQG+ + +TDAI+ YV+EK+ +AV++F+    EVDV LS             Q  EV
Sbjct: 3   KLVIQGKNVEITDAIRSYVQEKIERAVSHFAQITSEVDVNLSVA---RNPRISASQSAEV 59

Query: 469 TIYTLRNG-VVRVEDAENNLY 528
           T+Y   NG V+R E++  NLY
Sbjct: 60  TVYA--NGTVIRAEESSENLY 78

[28][TOP]
>UniRef100_UPI00017F5F53 putative RNA-binding protein n=1 Tax=Clostridium difficile
           QCD-23m63 RepID=UPI00017F5F53
          Length = 183

 Score = 60.5 bits (145), Expect = 7e-08
 Identities = 34/81 (41%), Positives = 51/81 (62%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 465
           + III G+++ +TDAIK  +E K++K + N+ H   +V VT+SAR        K  QK+E
Sbjct: 1   MNIIISGKQIELTDAIKNKIESKLSK-LDNYIHPDTDVKVTVSAR--------KARQKIE 51

Query: 466 VTIYTLRNGVVRVEDAENNLY 528
           VTI T+   ++R ED + NLY
Sbjct: 52  VTIATVNGPIIRAEDMQENLY 72

[29][TOP]
>UniRef100_B5VV76 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Arthrospira maxima CS-328 RepID=B5VV76_SPIMA
          Length = 212

 Score = 60.5 bits (145), Expect = 7e-08
 Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 465
           ++++IQG+ L +TDAI  YV++K+AKAV++F     EVDV LS             Q  E
Sbjct: 1   MKLVIQGKNLEITDAIHEYVQQKIAKAVSHFQQLTNEVDVHLSVA---RNPRINPRQTAE 57

Query: 466 VTIYTLRNG-VVRVEDAENNLY 528
           VTIY   NG V+R +++  NLY
Sbjct: 58  VTIYA--NGTVIRAQESSENLY 77

[30][TOP]
>UniRef100_B0A7Y1 Putative uncharacterized protein n=1 Tax=Clostridium bartlettii DSM
           16795 RepID=B0A7Y1_9CLOT
          Length = 187

 Score = 60.5 bits (145), Expect = 7e-08
 Identities = 34/81 (41%), Positives = 52/81 (64%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 465
           ++I+I G+K+ +TD IK  VE+K++K +  + H   EV VT+SAR        K +QK+E
Sbjct: 7   MKILITGKKIELTDGIKGAVEDKLSK-LDRYLHEDTEVKVTVSAR--------KAKQKIE 57

Query: 466 VTIYTLRNGVVRVEDAENNLY 528
           VTI  +   ++R ED+E NLY
Sbjct: 58  VTIIPINGPIIRAEDSEENLY 78

[31][TOP]
>UniRef100_C9XIR4 Putative RNA-binding protein n=3 Tax=Clostridium difficile
           RepID=C9XIR4_CLODI
          Length = 183

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 34/81 (41%), Positives = 51/81 (62%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 465
           + III G+++ +TDAIK  +E K++K + N+ H   +V VT+SAR        K  QK+E
Sbjct: 1   MNIIISGKQIELTDAIKNKIETKLSK-LDNYIHPDTDVKVTVSAR--------KARQKIE 51

Query: 466 VTIYTLRNGVVRVEDAENNLY 528
           VTI T+   ++R ED + NLY
Sbjct: 52  VTIATVNGPIIRAEDMQENLY 72

[32][TOP]
>UniRef100_Q2JS19 Ribosomal subunit interface protein n=1 Tax=Synechococcus sp.
           JA-3-3Ab RepID=Q2JS19_SYNJA
          Length = 191

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = +1

Query: 289 RIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEV 468
           +++IQG+ + +TDAI+ YV+EK+ +AV +F+    EVDV LS             Q  EV
Sbjct: 3   KLVIQGKNVEITDAIRSYVQEKIERAVKHFAQITSEVDVNLSVA---RNPRISANQSAEV 59

Query: 469 TIYTLRNG-VVRVEDAENNLY 528
           T+Y   NG V+R E++  NLY
Sbjct: 60  TVYA--NGTVIRAEESSENLY 78

[33][TOP]
>UniRef100_Q18CN1 Putative RNA-binding protein n=1 Tax=Clostridium difficile 630
           RepID=Q18CN1_CLOD6
          Length = 183

 Score = 60.1 bits (144), Expect = 1e-07
 Identities = 34/81 (41%), Positives = 51/81 (62%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 465
           + III G+++ +TDAIK  +E K++K + N+ H   +V VT+SAR        K  QK+E
Sbjct: 1   MNIIISGKQIELTDAIKNKIETKLSK-LDNYIHPDTDVKVTVSAR--------KARQKIE 51

Query: 466 VTIYTLRNGVVRVEDAENNLY 528
           VTI T+   ++R ED + NLY
Sbjct: 52  VTIATVNGPIIRAEDMQENLY 72

[34][TOP]
>UniRef100_Q8YSA5 Light-repressed protein n=1 Tax=Nostoc sp. PCC 7120
           RepID=Q8YSA5_ANASP
          Length = 213

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKV 462
           ++++I G+ + +TDAI+ YV +K+ KAV +F +   EVDV LS AR     T     Q  
Sbjct: 1   MKLVIHGKNIEITDAIREYVHQKIEKAVNHFQNITNEVDVHLSVARNPRINT----RQAA 56

Query: 463 EVTIYTLRNGVVRVEDAENNLY 528
           EVTIY     V+R E++  NLY
Sbjct: 57  EVTIYA-NGSVIRAEESSENLY 77

[35][TOP]
>UniRef100_Q3M699 SSU ribosomal protein S30P / sigma 54 modulation protein n=1
           Tax=Anabaena variabilis ATCC 29413 RepID=Q3M699_ANAVT
          Length = 213

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 34/82 (41%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKV 462
           ++++I G+ + +TDAI+ YV +K+ KAV +F +   EVDV LS AR     T     Q  
Sbjct: 1   MKLVIHGKNIEITDAIREYVHQKIEKAVNHFQNITNEVDVHLSVARNPRINT----RQAA 56

Query: 463 EVTIYTLRNGVVRVEDAENNLY 528
           EVTIY     V+R E++  NLY
Sbjct: 57  EVTIYA-NGSVIRAEESSENLY 77

[36][TOP]
>UniRef100_A0ZCI5 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Nodularia spumigena CCY9414 RepID=A0ZCI5_NODSP
          Length = 213

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 31/81 (38%), Positives = 49/81 (60%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 465
           ++++I G+ + +TDAI+ YV +K+ KAV++F +   EVDV LS       T    +Q  E
Sbjct: 1   MKLVIHGKNIEITDAIREYVHQKIEKAVSHFQNITNEVDVHLSVARNPRIT---TKQAAE 57

Query: 466 VTIYTLRNGVVRVEDAENNLY 528
           VTI+     V+R E++  NLY
Sbjct: 58  VTIFA-NGSVIRAEESSENLY 77

[37][TOP]
>UniRef100_B8HK26 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Cyanothece sp. PCC 7425 RepID=B8HK26_CYAP4
          Length = 209

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 30/81 (37%), Positives = 48/81 (59%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 465
           ++++I G+ + +TDAI+ YV++K+ KA  +F +   E+DV LS            +Q  E
Sbjct: 1   MKLVIHGKNIEITDAIRDYVQQKIEKAANHFQNLTTEIDVHLSVA---RNPRINPKQTAE 57

Query: 466 VTIYTLRNGVVRVEDAENNLY 528
           VTIYT    V+R E++  NLY
Sbjct: 58  VTIYT-NGSVIRAEESSENLY 77

[38][TOP]
>UniRef100_B4WNT9 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Synechococcus sp. PCC 7335 RepID=B4WNT9_9SYNE
          Length = 224

 Score = 57.4 bits (137), Expect = 6e-07
 Identities = 30/81 (37%), Positives = 51/81 (62%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 465
           ++++IQG+ + +TDAI+ +V +K+ KA A+F   + +VDV LS +          +Q  E
Sbjct: 1   MKLVIQGKNIEITDAIRSHVHQKIEKATAHFQTLINKVDVCLSVQ---NNPRIAPKQTAE 57

Query: 466 VTIYTLRNGVVRVEDAENNLY 528
           VT++ L N VVR E++  +LY
Sbjct: 58  VTVF-LNNVVVRAEESSESLY 77

[39][TOP]
>UniRef100_Q8DKM6 LrtA protein n=1 Tax=Thermosynechococcus elongatus BP-1
           RepID=Q8DKM6_THEEB
          Length = 209

 Score = 57.0 bits (136), Expect = 8e-07
 Identities = 29/82 (35%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKV 462
           +R++I G+ + +TD I+ Y+ +K+ +A ++F + + EVDV LS AR   T      +Q  
Sbjct: 1   MRLVIHGKNIDITDGIRSYLNQKIERATSHFQNVINEVDVHLSVARNRSTA----PKQTA 56

Query: 463 EVTIYTLRNGVVRVEDAENNLY 528
           EVT++ +   V+R E++  NLY
Sbjct: 57  EVTVF-VNGSVIRAEESSENLY 77

[40][TOP]
>UniRef100_B9NF07 Predicted protein n=1 Tax=Populus trichocarpa RepID=B9NF07_POPTR
          Length = 127

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 30/72 (41%), Positives = 42/72 (58%)
 Frame = +1

Query: 313 LPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVEVTIYTLRNG 492
           + +TD +K +VE+KV KAV  FSH ++EVD  LS RGG+ G   +        I   R+G
Sbjct: 1   MQLTDTVKEHVEDKVGKAVQKFSHLVREVDARLSVRGGELGKGPR--------IRKCRHG 52

Query: 493 VVRVEDAENNLY 528
           VVR E+    +Y
Sbjct: 53  VVRAEEDSETIY 64

[41][TOP]
>UniRef100_B4VJW0 Sigma 54 modulation protein / S30EA ribosomal protein n=1
           Tax=Microcoleus chthonoplastes PCC 7420
           RepID=B4VJW0_9CYAN
          Length = 215

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 32/82 (39%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKV 462
           ++++IQG+ + +TD+I+ YV +K+ KAV +F +   EVDV LS AR     T    +Q  
Sbjct: 1   MKLVIQGKNIEITDSIREYVNQKIEKAVNHFQNMTTEVDVHLSVARNPRINT----KQTA 56

Query: 463 EVTIYTLRNGVVRVEDAENNLY 528
           EVTIY  +  V+R +++  +LY
Sbjct: 57  EVTIYANKT-VIRAQESSEDLY 77

[42][TOP]
>UniRef100_P74518 Light repressed protein A homolog n=1 Tax=Synechocystis sp. PCC
           6803 RepID=LRTA_SYNY3
          Length = 191

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 465
           ++++IQG  + VT+AI  YVEEKV +AV +F +   +VDV LS       T+   + K E
Sbjct: 1   MKLLIQGNNITVTEAIHDYVEEKVERAVKHFQNLTTKVDVHLSVARNARITN---KHKAE 57

Query: 466 VTIYTLRNG-VVRVEDAENNLY 528
           VT+Y   NG V+R ++   NLY
Sbjct: 58  VTVYA--NGTVIRAQEGSENLY 77

[43][TOP]
>UniRef100_B2IVM1 Sigma 54 modulation protein/ribosomal protein S30EA n=1 Tax=Nostoc
           punctiforme PCC 73102 RepID=B2IVM1_NOSP7
          Length = 214

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKV 462
           ++++I  + + +TDAI+ YV +K+ KA ++F     EVDV LS AR     T     Q  
Sbjct: 1   MKLVIHSKNIEITDAIREYVHQKIEKAASHFQSITNEVDVHLSVARNPRINT----RQAA 56

Query: 463 EVTIYTLRNGVVRVEDAENNLY 528
           EVTIY     V+R E++  NLY
Sbjct: 57  EVTIYA-NGSVIRAEESSENLY 77

[44][TOP]
>UniRef100_A0YIH4 Light-repressed protein n=1 Tax=Lyngbya sp. PCC 8106
           RepID=A0YIH4_9CYAN
          Length = 212

 Score = 55.1 bits (131), Expect = 3e-06
 Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 465
           +++++QG+ L +T+AI  YV +K+ KAV+++     EVDV LS            +Q  E
Sbjct: 1   MKLVVQGKNLEITEAIHEYVHQKITKAVSHYQQLTNEVDVHLSIA---RNPRINPKQTAE 57

Query: 466 VTIYTLRNG-VVRVEDAENNLY 528
           VTIY   NG V+R +++  NLY
Sbjct: 58  VTIYA--NGTVIRAQESSENLY 77

[45][TOP]
>UniRef100_UPI00017F60C6 putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
           QCD-23m63 RepID=UPI00017F60C6
          Length = 185

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 31/81 (38%), Positives = 50/81 (61%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 465
           ++II+ GR++ +TD IK YV+ K+++ +  +     EV VT+SA+        K  QKVE
Sbjct: 1   MQIIVSGRQMKLTDGIKGYVDGKLSR-LEKYLDPESEVKVTVSAK--------KDRQKVE 51

Query: 466 VTIYTLRNGVVRVEDAENNLY 528
           VTI  +   ++R ED E++LY
Sbjct: 52  VTIIPINGQIIRAEDVEDDLY 72

[46][TOP]
>UniRef100_UPI00017F5ACC putative sigma 54 modulation protein n=1 Tax=Clostridium difficile
           ATCC 43255 RepID=UPI00017F5ACC
          Length = 185

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 31/81 (38%), Positives = 50/81 (61%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 465
           ++II+ GR++ +TD IK YV+ K+++ +  +     EV VT+SA+        K  QKVE
Sbjct: 1   MQIIVSGRQMKLTDGIKGYVDGKLSR-LEKYLDPESEVKVTVSAK--------KDRQKVE 51

Query: 466 VTIYTLRNGVVRVEDAENNLY 528
           VTI  +   ++R ED E++LY
Sbjct: 52  VTIIPINGQIIRAEDVEDDLY 72

[47][TOP]
>UniRef100_Q10ZL6 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Trichodesmium erythraeum IMS101 RepID=Q10ZL6_TRIEI
          Length = 215

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 465
           ++++IQG+ + +TD+I  YV +K+ KAV +F     EVDV LS            +Q  E
Sbjct: 1   MKLVIQGKNIEITDSIHEYVNQKIEKAVNHFQQLTTEVDVHLSVA---RNPRINPKQTAE 57

Query: 466 VTIYTLRNG-VVRVEDAENNLY 528
           VTIY   NG V+R +++  NLY
Sbjct: 58  VTIYA--NGTVIRAQESSENLY 77

[48][TOP]
>UniRef100_C9XLM7 Putative sigma 54 modulation protein n=3 Tax=Clostridium difficile
           RepID=C9XLM7_CLODI
          Length = 187

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 31/81 (38%), Positives = 50/81 (61%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKKEQKVE 465
           ++II+ GR++ +TD IK YV+ K+++ +  +     EV VT+SA+        K  QKVE
Sbjct: 1   MQIIVSGRQMKLTDGIKGYVDGKLSR-LEKYLDPESEVKVTVSAK--------KDRQKVE 51

Query: 466 VTIYTLRNGVVRVEDAENNLY 528
           VTI  +   ++R ED E++LY
Sbjct: 52  VTIIPINGQIIRAEDVEDDLY 72

[49][TOP]
>UniRef100_B4AWR2 Sigma 54 modulation protein/ribosomal protein S30EA n=1
           Tax=Cyanothece sp. PCC 7822 RepID=B4AWR2_9CHRO
          Length = 199

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLS-ARGGDTGTHGKKEQKV 462
           ++++IQG  + VT+AI  YV+EK+ KAV +F     +VDV LS A+ G      + + K 
Sbjct: 1   MKLLIQGNNITVTEAIHDYVQEKLEKAVKHFQAITTKVDVHLSVAKNGRV----QNKHKA 56

Query: 463 EVTIYTLRNGVVRVEDAENNLY 528
           EVT+Y     V+R ++   NLY
Sbjct: 57  EVTVYA-NGAVIRAQEGSENLY 77

[50][TOP]
>UniRef100_Q5N179 Light repressed protein A homolog n=1 Tax=Synechococcus elongatus
           PCC 6301 RepID=Q5N179_SYNP6
          Length = 207

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKK--EQK 459
           +++++QG  + VT AI  YV++K+ KAV+++   L E+DV LS        H K    Q 
Sbjct: 1   MKLVVQGTNIDVTAAIHDYVQQKLDKAVSHYQSFLTEIDVHLS-----VAKHAKSNPRQT 55

Query: 460 VEVTIYTLRNG-VVRVEDAENNLY 528
            EVTIY   NG V+R E+   NLY
Sbjct: 56  AEVTIYA--NGTVIRAEECNENLY 77

[51][TOP]
>UniRef100_Q31KN7 Sigma 54 modulation protein / SSU ribosomal protein S30P n=1
           Tax=Synechococcus elongatus PCC 7942 RepID=Q31KN7_SYNE7
          Length = 207

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
 Frame = +1

Query: 286 VRIIIQGRKLPVTDAIKLYVEEKVAKAVANFSHTLKEVDVTLSARGGDTGTHGKK--EQK 459
           +++++QG  + VT AI  YV++K+ KAV+++   L E+DV LS        H K    Q 
Sbjct: 1   MKLVVQGTNIDVTAAIHDYVQQKLDKAVSHYQSFLTEIDVHLS-----VAKHAKSNPRQT 55

Query: 460 VEVTIYTLRNG-VVRVEDAENNLY 528
            EVTIY   NG V+R E+   NLY
Sbjct: 56  AEVTIYA--NGTVIRAEECNENLY 77