AV633393 ( HC020c10_r )

[UP]


BLASTX 2.2.22 [Sep-27-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AV633393  HC020c10_r
         (397 letters)

Database: uniref100 
           9,526,577 sequences; 3,332,566,763 total letters

Searching..................................................done

significant alignments:[graphical|details]

UniRef100_Q93WL4 Light-harvesting chlorophyll-a/b binding protei...    67   6e-10
UniRef100_Q8S3U0 Major light-harvesting complex II protein m10 n...    67   6e-10
UniRef100_Q8S3T8 Major light-harvesting complex II protein m7 n=...    67   6e-10
UniRef100_Q1WLW0 Chloroplast light-harvesting chlorophyll-a/b bi...    67   8e-10
UniRef100_Q8S3T9 Chlorophyll a-b binding protein of LHCII n=1 Ta...    65   2e-09
UniRef100_A8J287 Chloropyll a-b binding protein of LHCII type I,...    65   2e-09
UniRef100_A8J264 Chloropyll a-b binding protein of LHCII n=1 Tax...    65   2e-09
UniRef100_A2SY48 Light-harvesting chlorophyll-a/b binding protei...    65   2e-09
UniRef100_A2SY47 Light-harvesting chlorophyll-a/b binding protei...    65   2e-09
UniRef100_P14273 Chlorophyll a-b binding protein of LHCII type I...    65   2e-09
UniRef100_Q9ZSJ5 Light harvesting complex II protein n=1 Tax=Chl...    65   2e-09
UniRef100_A8J270 Chlorophyll a-b binding protein of LHCII n=1 Ta...    65   2e-09
UniRef100_Q9AXF6 Light-harvesting complex II protein n=1 Tax=Chl...    60   1e-07
UniRef100_Q93WE0 Light-harvesting chlorophyll-a/b binding protei...    60   1e-07
UniRef100_A2SY45 Light-harvesting chlorophyll-a/b binding protei...    60   1e-07
UniRef100_A2SY44 Light-harvesting chlorophyll-a/b binding protei...    60   1e-07
UniRef100_Q5S3H0 Chloroplast major light-harvesting complex II p...    58   4e-07
UniRef100_Q93VE0 Light-harvesting chlorophyll-a/b binding protei...    57   8e-07
UniRef100_A2SY43 Light-harvesting chlorophyll-a/b binding protei...    57   8e-07
UniRef100_P22686 Chlorophyll a-b binding protein of LHCII type I...    56   1e-06
UniRef100_A8BDJ0 Major light-harvesting chlorophyll a/b protein ...    55   2e-06
UniRef100_P20865 Chlorophyll a-b binding protein of LHCII type I...    55   2e-06
UniRef100_A1XKU7 Major light-harvesting chlorophyll a/b protein ...    55   3e-06
UniRef100_A1XKU6 Major light-harvesting chlorophyll a/b protein ...    55   3e-06
UniRef100_P15195 Chlorophyll a-b binding protein type 1 member F...    54   5e-06
graphical overview:
alignment
UniRef100_Q93WL4 UniRef100_Q93WL4 UniRef100_Q8S3U0 UniRef100_Q8S3U0 UniRef100_Q8S3T8 UniRef100_Q8S3T8 UniRef100_Q1WLW0 UniRef100_Q1WLW0 UniRef100_Q8S3T9 UniRef100_Q8S3T9 UniRef100_A8J287 UniRef100_A8J287 UniRef100_A8J264 UniRef100_A8J264 UniRef100_A2SY48 UniRef100_A2SY48 UniRef100_A2SY47 UniRef100_A2SY47 UniRef100_P14273 UniRef100_P14273 UniRef100_Q9ZSJ5 UniRef100_Q9ZSJ5 UniRef100_A8J270 UniRef100_A8J270 UniRef100_Q9AXF6 UniRef100_Q9AXF6 UniRef100_Q93WE0 UniRef100_Q93WE0 UniRef100_A2SY45 UniRef100_A2SY45 UniRef100_A2SY44 UniRef100_A2SY44 UniRef100_Q5S3H0 UniRef100_Q5S3H0 UniRef100_Q93VE0 UniRef100_Q93VE0 UniRef100_A2SY43 UniRef100_A2SY43 UniRef100_P22686 UniRef100_P22686 UniRef100_A8BDJ0 UniRef100_A8BDJ0 UniRef100_P20865 UniRef100_P20865 UniRef100_A1XKU7 UniRef100_A1XKU7 UniRef100_A1XKU6 UniRef100_A1XKU6