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[1][TOP]
>UniRef100_Q1WLX9 Chloroplast ATP synthase subunit II n=1 Tax=Chlamydomonas incerta
           RepID=Q1WLX9_CHLIN
          Length = 209

 Score = 83.2 bits (204), Expect = 8e-15
 Identities = 50/70 (71%), Positives = 51/70 (72%)
 Frame = +3

Query: 108 AARPLRLVVRASAQKPQQQLAQLAKPALSAIVANALMAMPCLAPMPARFSTSTLTCPSWP 287
           AARPLRLVVRASAQKPQQQLAQLAKPALSAIVANALMAMP  A     F  + LT P   
Sbjct: 20  AARPLRLVVRASAQKPQQQLAQLAKPALSAIVANALMAMPAAAEAGKIFDFN-LTLPVMA 78

Query: 288 ASSCCLMVFL 317
                LMVFL
Sbjct: 79  GEFLLLMVFL 88

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 46/89 (51%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
 Frame = +2

Query: 50  MASLLARPQQAVVRAAKPACGAP----PAPGGPRFGSEAPAAAGPAGQARSVGHCCQRPD 217
           MASLLARPQQAVVRAAKPA   P          +   +    A PA  A         P 
Sbjct: 1   MASLLARPQQAVVRAAKPAAARPLRLVVRASAQKPQQQLAQLAKPALSAIVANALMAMP- 59

Query: 218 GYALLGADAGKIFDFNLDLPVMAGEFLLL 304
                 A+AGKIFDFNL LPVMAGEFLLL
Sbjct: 60  ----AAAEAGKIFDFNLTLPVMAGEFLLL 84

[2][TOP]
>UniRef100_A8J785 ATP synthase subunit b', chloroplastic n=1 Tax=Chlamydomonas
           reinhardtii RepID=ATPX_CHLRE
          Length = 209

 Score = 83.2 bits (204), Expect = 8e-15
 Identities = 50/70 (71%), Positives = 51/70 (72%)
 Frame = +3

Query: 108 AARPLRLVVRASAQKPQQQLAQLAKPALSAIVANALMAMPCLAPMPARFSTSTLTCPSWP 287
           AARPLRLVVRASAQKPQQQLAQLAKPALSAIVANALMAMP  A     F  + LT P   
Sbjct: 20  AARPLRLVVRASAQKPQQQLAQLAKPALSAIVANALMAMPAAAEAGKIFDFN-LTLPVMA 78

Query: 288 ASSCCLMVFL 317
                LMVFL
Sbjct: 79  GEFLLLMVFL 88

 Score = 68.2 bits (165), Expect = 3e-10
 Identities = 46/89 (51%), Positives = 49/89 (55%), Gaps = 4/89 (4%)
 Frame = +2

Query: 50  MASLLARPQQAVVRAAKPACGAP----PAPGGPRFGSEAPAAAGPAGQARSVGHCCQRPD 217
           MASLLARPQQAVVRAAKPA   P          +   +    A PA  A         P 
Sbjct: 1   MASLLARPQQAVVRAAKPAAARPLRLVVRASAQKPQQQLAQLAKPALSAIVANALMAMP- 59

Query: 218 GYALLGADAGKIFDFNLDLPVMAGEFLLL 304
                 A+AGKIFDFNL LPVMAGEFLLL
Sbjct: 60  ----AAAEAGKIFDFNLTLPVMAGEFLLL 84

[3][TOP]
>UniRef100_Q9SBM3 CFO ATP synthase subunit II n=1 Tax=Volvox carteri f. nagariensis
           RepID=Q9SBM3_VOLCA
          Length = 210

 Score = 76.3 bits (186), Expect = 1e-12
 Identities = 46/79 (58%), Positives = 54/79 (68%)
 Frame = +3

Query: 81  RSSALPSRPAARPLRLVVRASAQKPQQQLAQLAKPALSAIVANALMAMPCLAPMPARFST 260
           R++A P+  AARP+RLVVRA A+KP QQLAQL KPALSA+VANAL+AMP  A     F  
Sbjct: 14  RAAAKPA--AARPMRLVVRAQAEKPSQQLAQLVKPALSAVVANALLAMPAAAEAGKIFDF 71

Query: 261 STLTCPSWPASSCCLMVFL 317
           + LT P        LMVFL
Sbjct: 72  N-LTLPVMAGEFLLLMVFL 89

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 47/90 (52%), Positives = 49/90 (54%), Gaps = 5/90 (5%)
 Frame = +2

Query: 50  MASLLARPQQAVVR-AAKPACGAPPAPGGPRFGSEAPAAAGPAGQARSVGHCCQRPDGYA 226
           MASLLARPQQA  R AAKPA   P      R    A A       A+ V          A
Sbjct: 1   MASLLARPQQAFARAAAKPAAARP-----MRLVVRAQAEKPSQQLAQLVKPALSAVVANA 55

Query: 227 LL----GADAGKIFDFNLDLPVMAGEFLLL 304
           LL     A+AGKIFDFNL LPVMAGEFLLL
Sbjct: 56  LLAMPAAAEAGKIFDFNLTLPVMAGEFLLL 85