[UP]
[1][TOP]
>UniRef100_A8J094 Chitinase-related protein n=1 Tax=Chlamydomonas reinhardtii
RepID=A8J094_CHLRE
Length = 202
Score = 302 bits (774), Expect = 7e-81
Identities = 157/157 (100%), Positives = 157/157 (100%)
Frame = +1
Query: 28 MQSLRASPRLSSVRACSSRQRLVVKAASFDVRPYTLRKGDTLESIAKKRSVTVDQILGIN 207
MQSLRASPRLSSVRACSSRQRLVVKAASFDVRPYTLRKGDTLESIAKKRSVTVDQILGIN
Sbjct: 1 MQSLRASPRLSSVRACSSRQRLVVKAASFDVRPYTLRKGDTLESIAKKRSVTVDQILGIN 60
Query: 208 PDVKPGKVVEGQTILLPAQKLSDRDREILGGIGTTYRVYPIRAGETLSEVLSKRGISTDE 387
PDVKPGKVVEGQTILLPAQKLSDRDREILGGIGTTYRVYPIRAGETLSEVLSKRGISTDE
Sbjct: 61 PDVKPGKVVEGQTILLPAQKLSDRDREILGGIGTTYRVYPIRAGETLSEVLSKRGISTDE 120
Query: 388 FLRLNPGVDMKAVKDNQVIKLPIDKFTVREREMLIGS 498
FLRLNPGVDMKAVKDNQVIKLPIDKFTVREREMLIGS
Sbjct: 121 FLRLNPGVDMKAVKDNQVIKLPIDKFTVREREMLIGS 157
Score = 54.7 bits (130), Expect = 3e-06
Identities = 28/77 (36%), Positives = 41/77 (53%)
Frame = +1
Query: 76 SSRQRLVVKAASFDVRPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILL 255
S R R ++ R Y +R G+TL + KR ++ D+ L +NP V V + Q I L
Sbjct: 82 SDRDREILGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKL 141
Query: 256 PAQKLSDRDREILGGIG 306
P K + R+RE+L G G
Sbjct: 142 PIDKFTVREREMLIGSG 158
[2][TOP]
>UniRef100_C1EIQ5 Predicted protein n=1 Tax=Micromonas sp. RCC299 RepID=C1EIQ5_9CHLO
Length = 236
Score = 129 bits (324), Expect = 1e-28
Identities = 73/155 (47%), Positives = 104/155 (67%), Gaps = 3/155 (1%)
Frame = +1
Query: 40 RASPRLSSVRACSSRQRLVVKAASFDVRPYTLRKGDTLESIAKKRSVTVDQILGINPDVK 219
RA+PR ++R R VV A ++RPYTLRKGDTLE+IA+KRS+ VD+I IN +
Sbjct: 28 RAAPR-------AARARRVVTRAQGNLRPYTLRKGDTLETIAQKRSMKVDEIRKINSKLS 80
Query: 220 PGKVVE-GQTILLPAQKLSDRDREILGGIGTTY--RVYPIRAGETLSEVLSKRGISTDEF 390
G + G TILLPA KLS RD++I+ GI R+YP R GE++ +++ RGI+ ++
Sbjct: 81 SGAEAKVGDTILLPAGKLSARDKDIIDGITKINQPRIYPTRKGESIMDIIEPRGIAFEDV 140
Query: 391 LRLNPGVDMKAVKDNQVIKLPIDKFTVREREMLIG 495
+LNPGV++ + + +KLP K+TVRE+EML G
Sbjct: 141 KKLNPGVNLGTFTNGEKLKLPPGKYTVREKEMLQG 175
[3][TOP]
>UniRef100_C1N067 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1N067_9CHLO
Length = 259
Score = 122 bits (305), Expect = 2e-26
Identities = 76/170 (44%), Positives = 100/170 (58%), Gaps = 5/170 (2%)
Frame = +1
Query: 1 VYTKPTRTTMQSLRASPRLSSVRACSSRQRLVVKAASFDVRPYTLRKGDTLESIAKKRSV 180
V TR + R VR R+ LVV A +VRPYT+RKGDTL SIA KR +
Sbjct: 31 VVVAATRRATATATLPRRDGVVRRTVPRRALVVVA---NVRPYTVRKGDTLASIASKRGM 87
Query: 181 TVDQILGINPDVKPG---KVVEGQTILLPAQKLSDRDREILGGIGTTY--RVYPIRAGET 345
+V+++ N P +V G+TILLPA KLS RD EI+ GI R YP R GET
Sbjct: 88 SVEEVKRNNKGRSPSPDAEVKPGETILLPAGKLSKRDSEIIAGITKINQPREYPTRKGET 147
Query: 346 LSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDKFTVREREMLIG 495
+ E++ +RGIS ++ RLNPGV++ + +KLP K+T RE+EML G
Sbjct: 148 IGEIIGQRGISFEDVQRLNPGVNLGTFNAGERLKLPPGKYTTREKEMLQG 197
[4][TOP]
>UniRef100_A4S758 Predicted protein (Fragment) n=1 Tax=Ostreococcus lucimarinus
CCE9901 RepID=A4S758_OSTLU
Length = 187
Score = 109 bits (272), Expect = 1e-22
Identities = 62/128 (48%), Positives = 84/128 (65%), Gaps = 2/128 (1%)
Frame = +1
Query: 118 VRPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILG 297
VRPYT+RKGDTLESIA KRS++ ++ N ++ + G TILLPA ++S RD+EI+
Sbjct: 1 VRPYTVRKGDTLESIASKRSMSAGEVKKYNKSLRGEGLAPGTTILLPANRVSKRDQEIID 60
Query: 298 GIG--TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDKFTV 471
GI RVYP R GE+L++++ R IS E RLNP + A+K + LP K+TV
Sbjct: 61 GIRGVNEPRVYPCRGGESLNDIIEPRKISKAEVERLNP--KLGALKAGTKVLLPPGKYTV 118
Query: 472 REREMLIG 495
RE+EML G
Sbjct: 119 REKEMLQG 126
[5][TOP]
>UniRef100_Q00VD3 Chromosome 15 contig 1, DNA sequence n=1 Tax=Ostreococcus tauri
RepID=Q00VD3_OSTTA
Length = 188
Score = 107 bits (268), Expect = 3e-22
Identities = 63/129 (48%), Positives = 83/129 (64%), Gaps = 3/129 (2%)
Frame = +1
Query: 118 VRPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVE-GQTILLPAQKLSDRDREIL 294
+RPYT+RKGDT+ESIA KRS+ + +N + G E G TILLP+ LS RDREI+
Sbjct: 1 MRPYTVRKGDTVESIASKRSMKATDVRRLNTSLAGGGEPEAGSTILLPSMNLSARDREII 60
Query: 295 GGIG--TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDKFT 468
GI RVYP+RAGE+L +++ R I+ + RLNP + A+K + LP K+T
Sbjct: 61 DGIKGVNAPRVYPVRAGESLEDIIGSRKIARADVERLNP--KLGALKPGMKLLLPPGKYT 118
Query: 469 VREREMLIG 495
VREREML G
Sbjct: 119 VREREMLQG 127
[6][TOP]
>UniRef100_A8MI50 Peptidoglycan-binding LysM n=1 Tax=Alkaliphilus oremlandii OhILAs
RepID=A8MI50_ALKOO
Length = 713
Score = 72.0 bits (175), Expect = 2e-11
Identities = 41/111 (36%), Positives = 62/111 (55%)
Frame = +1
Query: 124 PYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGI 303
PYT++ GDT+ SIA+K + TVD IL NP + P + GQ I +P + I
Sbjct: 251 PYTVKAGDTIFSIAQKHNTTVDAILRANPGLNPNNLQIGQVICIPMGTPPQQ-----CPI 305
Query: 304 GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPI 456
GTT Y ++AG+T+ + K + D LR NPG++ ++ QVI +P+
Sbjct: 306 GTT--PYTVKAGDTIFSIAQKHNTTVDAILRANPGLNPNNLQIGQVICIPM 354
Score = 71.6 bits (174), Expect = 3e-11
Identities = 41/111 (36%), Positives = 62/111 (55%)
Frame = +1
Query: 124 PYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGI 303
PYT++ GDT+ SIA+K + TVD IL NP + P + GQ I +P + I
Sbjct: 193 PYTVKAGDTIFSIAQKHNTTVDAILRANPGLNPNNLQIGQIICIPMGTPPQQ-----CPI 247
Query: 304 GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPI 456
GTT Y ++AG+T+ + K + D LR NPG++ ++ QVI +P+
Sbjct: 248 GTT--PYTVKAGDTIFSIAQKHNTTVDAILRANPGLNPNNLQIGQVICIPM 296
Score = 68.9 bits (167), Expect = 2e-10
Identities = 40/111 (36%), Positives = 61/111 (54%)
Frame = +1
Query: 124 PYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGI 303
PYT++ GDT+ SIA+K + TVD IL NP + P + GQ I +P + I
Sbjct: 367 PYTVKAGDTIFSIAQKHNTTVDAILRANPGLNPNNLQIGQVICIPMGTPPQQ-----CPI 421
Query: 304 GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPI 456
GTT Y ++AG+T+ + K + D LR NP ++ ++ QVI +P+
Sbjct: 422 GTT--PYTVKAGDTIFSIAQKHNTTVDAILRANPELNPNNLQIGQVICIPM 470
Score = 68.6 bits (166), Expect = 2e-10
Identities = 37/111 (33%), Positives = 62/111 (55%)
Frame = +1
Query: 124 PYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGI 303
PY +R GDT SIA++ +++VD ++ NP+V P + GQ I +P + I
Sbjct: 135 PYIVRPGDTFFSIARRYNISVDALIAANPNVNPDNLQIGQQICIPMGTPPQK-----CPI 189
Query: 304 GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPI 456
GTT Y ++AG+T+ + K + D LR NPG++ ++ Q+I +P+
Sbjct: 190 GTT--PYTVKAGDTIFSIAQKHNTTVDAILRANPGLNPNNLQIGQIICIPM 238
Score = 65.9 bits (159), Expect = 1e-09
Identities = 40/110 (36%), Positives = 59/110 (53%)
Frame = +1
Query: 124 PYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGI 303
PYT++ GDT+ SIA+K + TVD IL NP++ P + GQ I +P +
Sbjct: 425 PYTVKAGDTIFSIAQKHNTTVDAILRANPELNPNNLQIGQVICIPMGTPPQQ-----CPA 479
Query: 304 GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
GTT Y IR+G+T + + + + R NPGVD ++ QVI +P
Sbjct: 480 GTT--PYTIRSGDTFYLLAQRYNTTVEAIQRANPGVDPNNLQIGQVICMP 527
Score = 59.3 bits (142), Expect = 1e-07
Identities = 34/110 (30%), Positives = 58/110 (52%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
YT++ GDT SIA++ +++VD ++ NP+V P + GQ I +P + +G
Sbjct: 77 YTVKAGDTFFSIARRYNISVDALIAANPNVNPDALYVGQVICIPKTTPPPQTCP----VG 132
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPI 456
TT Y +R G+T + + IS D + NP V+ ++ Q I +P+
Sbjct: 133 TT--PYIVRPGDTFFSIARRYNISVDALIAANPNVNPDNLQIGQQICIPM 180
Score = 57.8 bits (138), Expect = 4e-07
Identities = 35/110 (31%), Positives = 56/110 (50%)
Frame = +1
Query: 124 PYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGI 303
PY ++ GDT +IA + + TV ++ NP+V P + GQ I +P + +
Sbjct: 17 PYMVKAGDTFYNIAIRCNTTVAALMAANPNVNPNSLYIGQIICVPMSQPQPQP----PCP 72
Query: 304 GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
G TY Y ++AG+T + + IS D + NP V+ A+ QVI +P
Sbjct: 73 GGTY--YTVKAGDTFFSIARRYNISVDALIAANPNVNPDALYVGQVICIP 120
Score = 57.4 bits (137), Expect = 5e-07
Identities = 34/110 (30%), Positives = 54/110 (49%)
Frame = +1
Query: 124 PYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGI 303
PYT+R GDT +A++ + TV+ I NP V P + GQ I +P + G
Sbjct: 483 PYTIRSGDTFYLLAQRYNTTVEAIQRANPGVDPNNLQIGQVICMPGTPPTPPP----SGC 538
Query: 304 GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
T Y I++G+T + + + + R NPGV+ ++ QVI +P
Sbjct: 539 PTGTTPYTIKSGDTFYLLAQRYNTTVEAIQRANPGVNPNNLQIGQVICMP 588
Score = 56.6 bits (135), Expect = 9e-07
Identities = 33/110 (30%), Positives = 55/110 (50%)
Frame = +1
Query: 124 PYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGI 303
PYT++ GDT +A++ + TV+ I NP V P + GQ I +P + G
Sbjct: 605 PYTIKSGDTFYLLAQRYNTTVEAIQKANPGVNPNNLQIGQVICMPGTPPTTPPPS---GC 661
Query: 304 GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
T Y I++G+TL + K + + + NPG++ ++ QVI +P
Sbjct: 662 PTGTTPYTIKSGDTLYLLAKKFNTTVEAIEKANPGINPNNLQIGQVICIP 711
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/110 (29%), Positives = 54/110 (49%)
Frame = +1
Query: 124 PYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGI 303
PYT++ GDT +A++ + TV+ I NP V P + GQ I +P + G
Sbjct: 544 PYTIKSGDTFYLLAQRYNTTVEAIQRANPGVNPNNLQIGQVICMPGTPPTPPP----SGC 599
Query: 304 GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
T Y I++G+T + + + + + NPGV+ ++ QVI +P
Sbjct: 600 PTGTTPYTIKSGDTFYLLAQRYNTTVEAIQKANPGVNPNNLQIGQVICMP 649
[7][TOP]
>UniRef100_B5JQM0 LysM domain protein n=1 Tax=Verrucomicrobiae bacterium DG1235
RepID=B5JQM0_9BACT
Length = 419
Score = 70.1 bits (170), Expect = 8e-11
Identities = 38/146 (26%), Positives = 75/146 (51%)
Frame = +1
Query: 19 RTTMQSLRASPRLSSVRACSSRQRLVVKAASFDVRPYTLRKGDTLESIAKKRSVTVDQIL 198
+ T+++++++ ++++ + Q+L + AA+ V Y +R+GD L IAKK ++ ++
Sbjct: 99 KVTVEAIKSANQITNANQIVAGQQLTIPAAAPSVIEYKIRRGDNLSDIAKKYGASLSELK 158
Query: 199 GINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIGTTYRVYPIRAGETLSEVLSKRGIS 378
+N K+ GQ I +P S + T Y Y IR G++LS++ G+S
Sbjct: 159 ALNAIRNSNKISIGQVIRIPVSAGSPTASQPSAPAPTQYIDYKIRRGDSLSDIAKTYGVS 218
Query: 379 TDEFLRLNPGVDMKAVKDNQVIKLPI 456
LN + ++ QVI++P+
Sbjct: 219 LSSLKTLNAIRNSNKIRIGQVIRIPV 244
Score = 59.3 bits (142), Expect = 1e-07
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 6/152 (3%)
Frame = +1
Query: 19 RTTMQSLRASPRLSSVRACSSRQRLVVKAASFDVRPYT------LRKGDTLESIAKKRSV 180
+ T Q+++ + ++S+ Q L + S D T +RKG+TL IA+ V
Sbjct: 41 KVTAQAIKNANKISNANRIKVGQELTIPVPSSDTVETTATTAHRVRKGETLTEIAQAYKV 100
Query: 181 TVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIGTTYRVYPIRAGETLSEVL 360
TV+ I N ++V GQ + +PA S + Y IR G+ LS++
Sbjct: 101 TVEAIKSANQITNANQIVAGQQLTIPAAAPSVIE-------------YKIRRGDNLSDIA 147
Query: 361 SKRGISTDEFLRLNPGVDMKAVKDNQVIKLPI 456
K G S E LN + + QVI++P+
Sbjct: 148 KKYGASLSELKALNAIRNSNKISIGQVIRIPV 179
[8][TOP]
>UniRef100_C7HEG2 ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Clostridium thermocellum
DSM 2360 RepID=C7HEG2_CLOTM
Length = 289
Score = 68.6 bits (166), Expect = 2e-10
Identities = 40/124 (32%), Positives = 60/124 (48%)
Frame = +1
Query: 103 AASFDVRPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRD 282
A PY ++ GDTL IA K + TV IL NP + P K+ GQ I +P K +
Sbjct: 67 ACPIGTSPYEIKSGDTLSKIAAKFNTTVGDILNANPGIIPEKLYVGQKICIPQPKSENPG 126
Query: 283 REILGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDK 462
T Y I+ G+TLS + ++ + + NPG++ A+ QVI +P+
Sbjct: 127 -------CPTMNYYVIQKGDTLSAIAKIFNVTVQQLINANPGINPNALYVGQVICIPVAP 179
Query: 463 FTVR 474
+VR
Sbjct: 180 SSVR 183
Score = 58.9 bits (141), Expect = 2e-07
Identities = 38/112 (33%), Positives = 61/112 (54%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
YT+R GDTL IA + + TV+ IL NP + P ++ GQ I +P + + IG
Sbjct: 16 YTVRAGDTLYLIAGRFNTTVEAILAANPGIVPERLYIGQVICVPYA----QPPQPACPIG 71
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDK 462
T+ Y I++G+TLS++ +K + + L NPG+ + + Q I +P K
Sbjct: 72 TS--PYEIKSGDTLSKIAAKFNTTVGDILNANPGIIPEKLYVGQKICIPQPK 121
[9][TOP]
>UniRef100_B4BFI9 ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Clostridium thermocellum
DSM 4150 RepID=B4BFI9_CLOTM
Length = 289
Score = 68.6 bits (166), Expect = 2e-10
Identities = 40/124 (32%), Positives = 60/124 (48%)
Frame = +1
Query: 103 AASFDVRPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRD 282
A PY ++ GDTL IA K + TV IL NP + P K+ GQ I +P K +
Sbjct: 67 ACPIGTSPYEIKSGDTLSKIAAKFNTTVGDILNANPGIIPEKLYVGQKICIPQPKSENPG 126
Query: 283 REILGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDK 462
T Y I+ G+TLS + ++ + + NPG++ A+ QVI +P+
Sbjct: 127 -------CPTMNYYVIQKGDTLSAIAKIFNVTVQQLINANPGINPNALYVGQVICIPVAP 179
Query: 463 FTVR 474
+VR
Sbjct: 180 SSVR 183
Score = 60.1 bits (144), Expect = 8e-08
Identities = 38/112 (33%), Positives = 62/112 (55%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
YT+R GDTL IA + ++TV+ IL NP + P ++ GQ I +P + + IG
Sbjct: 16 YTVRAGDTLYLIAGRFNITVEAILAANPGIVPERLYIGQVICVPYA----QPPQPACPIG 71
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDK 462
T+ Y I++G+TLS++ +K + + L NPG+ + + Q I +P K
Sbjct: 72 TS--PYEIKSGDTLSKIAAKFNTTVGDILNANPGIIPEKLYVGQKICIPQPK 121
[10][TOP]
>UniRef100_A3DJS3 ErfK/YbiS/YcfS/YnhG n=1 Tax=Clostridium thermocellum ATCC 27405
RepID=A3DJS3_CLOTH
Length = 289
Score = 66.6 bits (161), Expect = 8e-10
Identities = 39/124 (31%), Positives = 59/124 (47%)
Frame = +1
Query: 103 AASFDVRPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRD 282
A PY ++ GDTL IA K + TV IL NP + P K+ GQ I +P K +
Sbjct: 67 ACPIGTSPYEIKSGDTLSKIAAKFNTTVGDILNANPGIIPEKLYVGQKICIPQPKSENPG 126
Query: 283 REILGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDK 462
T Y I+ G+TL + ++ + + NPG++ A+ QVI +P+
Sbjct: 127 -------CPTMNYYVIQKGDTLPAIAKIFNVTVQQLINANPGINPNALYVGQVICIPVAP 179
Query: 463 FTVR 474
+VR
Sbjct: 180 SSVR 183
Score = 58.9 bits (141), Expect = 2e-07
Identities = 38/112 (33%), Positives = 61/112 (54%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
YT+R GDTL IA + + TV+ IL NP + P ++ GQ I +P + + IG
Sbjct: 16 YTVRAGDTLYLIAGRFNTTVEAILAANPGIVPERLYIGQVICVPYA----QPPQPACPIG 71
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDK 462
T+ Y I++G+TLS++ +K + + L NPG+ + + Q I +P K
Sbjct: 72 TS--PYEIKSGDTLSKIAAKFNTTVGDILNANPGIIPEKLYVGQKICIPQPK 121
[11][TOP]
>UniRef100_A7C3H3 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS
RepID=A7C3H3_9GAMM
Length = 274
Score = 66.2 bits (160), Expect = 1e-09
Identities = 37/108 (34%), Positives = 54/108 (50%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
+T++ G+TL IA ++VDQ+L +NP + P GQTI L + S
Sbjct: 4 HTIKTGETLYHIATTNGLSVDQLLKMNPGLDPNHYHAGQTINLSSSSPSTSSHS-----S 58
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKL 450
Y I+AGETL + + G+S D+ L +NPG+D Q I L
Sbjct: 59 NQSTTYAIKAGETLYHIATTHGLSVDQLLEMNPGLDSNHYSAGQTINL 106
[12][TOP]
>UniRef100_A7C2A7 Putative uncharacterized protein n=1 Tax=Beggiatoa sp. PS
RepID=A7C2A7_9GAMM
Length = 285
Score = 66.2 bits (160), Expect = 1e-09
Identities = 36/109 (33%), Positives = 57/109 (52%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
YTL GDTL S+A+ ++++Q+L INP + P GQ I + A +
Sbjct: 4 YTLNAGDTLYSLARNNGISLNQLLEINPGLDPNNYHVGQIINVSASNTTPSAPSSTS--S 61
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
T+ + Y I+AGETL + + G+S ++ L + PG+D Q I +P
Sbjct: 62 TSTKTYTIKAGETLYRIATIHGLSLNQLLEMTPGLDPNNYHVGQTINIP 110
[13][TOP]
>UniRef100_Q73N59 LysM domain/M23/M37 peptidase domain protein n=1 Tax=Treponema
denticola RepID=Q73N59_TREDE
Length = 301
Score = 63.9 bits (154), Expect = 5e-09
Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 2/121 (1%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
+ + KGDTL SI+KK + +D IL N P K+ GQ +++P + + D++ G
Sbjct: 26 HIIEKGDTLYSISKKYNTPIDSILKKNNLSDPSKIKIGQKLIIPVESSAKNDKKTNAKTG 85
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDKF--TVRER 480
+ + I+ G+TL + K G+ + L+LN + +K Q++K+P K T +E+
Sbjct: 86 SEEITHVIQKGDTLYALAKKFGVKFSDILKLNGLNEKTPLKIGQILKIPQGKSQGTAQEQ 145
Query: 481 E 483
E
Sbjct: 146 E 146
[14][TOP]
>UniRef100_O65213 Chitinase n=1 Tax=Volvox carteri f. nagariensis RepID=O65213_VOLCA
Length = 309
Score = 63.9 bits (154), Expect = 5e-09
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 9/118 (7%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
YT++ GDT +IA++R TVD I +NP V P ++ GQ I +P GG G
Sbjct: 42 YTIQPGDTFWAIAQRRGTTVDVIQSLNPGVVPTRLQVGQVINVPCS----------GGGG 91
Query: 307 TTYR---------VYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
+T Y I+ G+T + +RG + D LNPGV+ ++ QVI +P
Sbjct: 92 STPTSTAPPARGCTYTIQPGDTFWAIAQRRGTTVDVIQSLNPGVNPARLQVGQVINVP 149
[15][TOP]
>UniRef100_C8W5E0 Peptidoglycan-binding LysM n=1 Tax=Desulfotomaculum acetoxidans DSM
771 RepID=C8W5E0_9FIRM
Length = 179
Score = 62.0 bits (149), Expect = 2e-08
Identities = 35/109 (32%), Positives = 58/109 (53%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
YT+R GD+L S+A + + TV+ I NP + P + GQ I +P + + + + GG
Sbjct: 19 YTIRPGDSLLSLASRFNTTVEAITNANPGIVPTNLQIGQQICIPVKPVPGKCQ---GGF- 74
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
+Y I+ G+T + ++ GI+ D + NPGVD + Q I +P
Sbjct: 75 ----LYSIKPGDTFYNLANRFGIAVDSLIAANPGVDFNKLAVGQEICIP 119
[16][TOP]
>UniRef100_A6TKQ0 Peptidoglycan-binding domain 1 protein n=1 Tax=Alkaliphilus
metalliredigens QYMF RepID=A6TKQ0_ALKMQ
Length = 320
Score = 61.2 bits (147), Expect = 3e-08
Identities = 36/109 (33%), Positives = 56/109 (51%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
YT++ GDT +IA+ ++++D +L NP V P +++ GQ I +P +G
Sbjct: 15 YTIQSGDTFYAIARAYNISLDVLLAANPGVNPDRLMVGQRICIPISTPPSTGCP----VG 70
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
T Y IRAG+T + + I D L NPGV+ + QVI +P
Sbjct: 71 TV--PYTIRAGDTFYSIATTNNIPLDALLTANPGVNPDRLMVGQVICVP 117
[17][TOP]
>UniRef100_Q5L0E3 Peptidoglycan hydrolase (DL-endopeptidase II family) (Cell
wall-binding protein) n=1 Tax=Geobacillus kaustophilus
RepID=Q5L0E3_GEOKA
Length = 341
Score = 60.5 bits (145), Expect = 6e-08
Identities = 38/126 (30%), Positives = 63/126 (50%), Gaps = 2/126 (1%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDV-KPGKVVEGQTILLPAQKLSDRDREILGGI 303
YT+ GDTL IA+K S TVD +L +NP + P + GQ + + ++ +
Sbjct: 81 YTVEPGDTLSGIARKFSTTVDALLKLNPSITNPDFIRAGQKLQVAGEQERSNTYNVQPAA 140
Query: 304 GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGV-DMKAVKDNQVIKLPIDKFTVRER 480
T Y ++AG+TL E+ +K + D L LNP + + ++ Q IK+ VRE
Sbjct: 141 VPTSGRYIVQAGDTLLEIANKFQTTVDRLLALNPQITNPNTIRIGQAIKVAGGTTDVREA 200
Query: 481 EMLIGS 498
+ + +
Sbjct: 201 KQQVSA 206
[18][TOP]
>UniRef100_A6TS07 Peptidoglycan-binding LysM n=1 Tax=Alkaliphilus metalliredigens
QYMF RepID=A6TS07_ALKMQ
Length = 232
Score = 60.5 bits (145), Expect = 6e-08
Identities = 33/110 (30%), Positives = 59/110 (53%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
Y ++ GDT +IA++ ++ V+ ++ NPDV P + GQ + +PA R G+
Sbjct: 71 YVIQSGDTFFNIARRYNIAVEALIAANPDVNPDALQIGQEVCVPAV----RPPAPCPGV- 125
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPI 456
Y IRAG+T + + G++ ++ +NP VD + ++ Q I LP+
Sbjct: 126 ----TYTIRAGDTFYSIAIRYGVTVEQLRAVNPNVDPERLQIGQRICLPV 171
Score = 53.1 bits (126), Expect = 1e-05
Identities = 35/110 (31%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
YT+R GDT SIA + VTV+Q+ +NP+V P ++ GQ I LP GGI
Sbjct: 127 YTIRAGDTFYSIAIRYGVTVEQLRAVNPNVDPERLQIGQRICLPVG--VPGPIPCPGGI- 183
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGV-DMKAVKDNQVIKLP 453
+Y +++G+TL + + G++ + NP + D ++ ++I +P
Sbjct: 184 ----LYTVQSGDTLYLIARRYGMTVAQLTIANPQLTDPNQLRVGEIICIP 229
[19][TOP]
>UniRef100_C4XN11 Putative uncharacterized protein n=1 Tax=Desulfovibrio magneticus
RS-1 RepID=C4XN11_DESMR
Length = 835
Score = 59.7 bits (143), Expect = 1e-07
Identities = 29/114 (25%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Frame = +1
Query: 115 DVRPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREIL 294
D Y + GDTL ++++ V+++++L +N +V P ++ GQ + +PA+
Sbjct: 623 DAGLYPVAPGDTLWGLSRRFGVSLEEMLAVNGEVDPSRLRVGQLVTVPAE---------- 672
Query: 295 GGIGTT-YRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
GG+ + ++P+ AG++L + + +S + NPGVD +++ Q +++P
Sbjct: 673 GGLASAEMLLFPVSAGDSLWSIAKRFDVSVEALTAANPGVDPLRLREGQTLRVP 726
Score = 57.0 bits (136), Expect = 7e-07
Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 7/116 (6%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLP-------AQKLSDRDR 285
+T+ GD S+A++ SVTV + NP V P ++ GQ + LP A+ + +
Sbjct: 490 HTVADGDNFWSVARQHSVTVAALTEANPGVDPTRLRIGQPLALPAAASATAARPAAGKQH 549
Query: 286 EILGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
L G G Y + G+ + + G+S D+ RLN G+D ++ QV+ +P
Sbjct: 550 AALDGAG-----YVVADGDNFWSIAKRLGVSADDLTRLNAGLDPLRLQPGQVLAVP 600
Score = 55.1 bits (131), Expect = 3e-06
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 5/154 (3%)
Frame = +1
Query: 13 PTRTTMQSLRASPRLSSVRACSSRQRLVVKAASFDVRPYTLRKGDTLESIAKKRSVTVDQ 192
PTR + A P +S A ++R + A+ D Y + GD SIAK+ V+ D
Sbjct: 521 PTRLRIGQPLALPAAAS--ATAARPAAGKQHAALDGAGYVVADGDNFWSIAKRLGVSADD 578
Query: 193 ILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIGTTYRV-----YPIRAGETLSEV 357
+ +N + P ++ GQ + +P ++ T V YP+ G+TL +
Sbjct: 579 LTRLNAGLDPLRLQPGQVLAVPDNARAEALAAPAPAAAETRTVSDAGLYPVAPGDTLWGL 638
Query: 358 LSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPID 459
+ G+S +E L +N VD ++ Q++ +P +
Sbjct: 639 SRRFGVSLEEMLAVNGEVDPSRLRVGQLVTVPAE 672
[20][TOP]
>UniRef100_B8CX65 Peptidoglycan-binding LysM n=1 Tax=Halothermothrix orenii H 168
RepID=B8CX65_HALOH
Length = 173
Score = 58.9 bits (141), Expect = 2e-07
Identities = 32/114 (28%), Positives = 59/114 (51%)
Frame = +1
Query: 115 DVRPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREIL 294
+ RPYT++ GDT S+A++ ++++ I+ NP+ P + GQ I +P Q+ E
Sbjct: 8 NTRPYTIKAGDTFYSLARRFNISLSAIISANPEADPESLRIGQRICIPRQEYYPPCPE-- 65
Query: 295 GGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPI 456
Y I+ G+TL + + +S D+ L NP + + ++ VI +P+
Sbjct: 66 ------GNFYTIKRGDTLYSIAQRFSVSLDDLLEANPFIVPENLEVGTVICIPL 113
[21][TOP]
>UniRef100_B0TES9 Putative uncharacterized protein n=1 Tax=Heliobacterium
modesticaldum Ice1 RepID=B0TES9_HELMI
Length = 573
Score = 58.9 bits (141), Expect = 2e-07
Identities = 33/113 (29%), Positives = 58/113 (51%)
Frame = +1
Query: 115 DVRPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREIL 294
D YT++ GD+L IA + VTV ++ N ++ G + GQT+ +P +
Sbjct: 332 DTNTYTVKAGDSLWRIANSQGVTVTDLMKAN-NLTSGTIYPGQTLQIPVAAAGE------ 384
Query: 295 GGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
Y + +G+T+ ++ +K GIS + ++ NPGVD + QV+K+P
Sbjct: 385 ---------YRVVSGDTMWKIANKLGISLNSLIQANPGVDANQLYVGQVLKIP 428
[22][TOP]
>UniRef100_C9S0H5 NLP/P60 protein n=2 Tax=Geobacillus RepID=C9S0H5_9BACI
Length = 341
Score = 58.9 bits (141), Expect = 2e-07
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 2/126 (1%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDV-KPGKVVEGQTILLPAQKLSDRDREILGGI 303
YT+ GDTL IA+K TVD +L +NP + P + GQ + + ++ +
Sbjct: 81 YTVEPGDTLSGIARKFGTTVDALLKLNPSITNPDFIRAGQKLQVAGEQERSNTYNVQPAA 140
Query: 304 GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGV-DMKAVKDNQVIKLPIDKFTVRER 480
T Y ++AG+TL E+ +K + D L LNP + + ++ Q IK+ VRE
Sbjct: 141 VPTSGRYIVQAGDTLLEIANKFQTTVDRLLALNPQITNPNTIRIGQAIKVAGGTTDVREA 200
Query: 481 EMLIGS 498
+ + +
Sbjct: 201 KQQVSA 206
[23][TOP]
>UniRef100_A9E2S9 CTP synthetase n=1 Tax=Kordia algicida OT-1 RepID=A9E2S9_9FLAO
Length = 647
Score = 58.9 bits (141), Expect = 2e-07
Identities = 35/112 (31%), Positives = 59/112 (52%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
YT++ +T IA +T++++ INP++K G + GQ I LP +K +
Sbjct: 162 YTVKAKETKWGIAHSYGLTIEELEDINPEIKEGLKI-GQEIKLPIRKEKPKVAS-----A 215
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDK 462
Y Y ++ +T+ + K G+S DE +RLNP + +K V+KLP+ K
Sbjct: 216 ANYVFYDVKPKQTMYTLTRKLGVSEDELIRLNPAL-KDGLKAGMVLKLPVKK 266
Score = 56.6 bits (135), Expect = 9e-07
Identities = 29/117 (24%), Positives = 63/117 (53%)
Frame = +1
Query: 103 AASFDVRPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRD 282
A + + + + +G+T+ESIA + ++T D I+ +NP+ + G V +++P++ +
Sbjct: 18 ATAQQYKSHKVSRGETVESIAAQYNITADDIIRLNPEARRG-VRRNNVLVIPSKSI---- 72
Query: 283 REILGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
++ + T+ + +R ETL + K G++ D+ L+ N V + +K I +P
Sbjct: 73 -KVSKDVDVTFTNHKVRRKETLYSISKKYGVTVDDILKFNEKVAKEGLKKGDRIAIP 128
[24][TOP]
>UniRef100_C9LFW0 Putative LysM domain protein n=1 Tax=Prevotella tannerae ATCC 51259
RepID=C9LFW0_9BACT
Length = 498
Score = 57.8 bits (138), Expect = 4e-07
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Frame = +1
Query: 124 PYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGI 303
P+ ++ G+TL S+A+ T+D+IL INP + + GQTILLP GG
Sbjct: 32 PHVVQGGETLYSLARLHHTTIDKILSINPGLTVESLQAGQTILLPT-----------GGA 80
Query: 304 GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMK--AVKDNQVIKLP 453
+ + + G+T+ + + I+ DE + +NP + + +K VI +P
Sbjct: 81 AGSPTTHVVSKGDTMWNIAKRYNITVDELVAVNPAMRQEDYKLKKGSVINIP 132
[25][TOP]
>UniRef100_A8UB08 Polysaccharide deacetylase family protein n=1 Tax=Carnobacterium
sp. AT7 RepID=A8UB08_9LACT
Length = 386
Score = 57.8 bits (138), Expect = 4e-07
Identities = 36/143 (25%), Positives = 66/143 (46%)
Frame = +1
Query: 25 TMQSLRASPRLSSVRACSSRQRLVVKAASFDVRPYTLRKGDTLESIAKKRSVTVDQILGI 204
T+Q L + +L+++ Q L++ + YT++ GD L IAK +VTV Q++
Sbjct: 259 TVQQLTTANQLTNMNLIRVGQLLIIPTTN-----YTVKAGDILIKIAKAHNVTVQQLVDT 313
Query: 205 NPDVKPGKVVEGQTILLPAQKLSDRDREILGGIGTTYRVYPIRAGETLSEVLSKRGISTD 384
N P + GQ + +PA+ + T Y +++G+TL + +K G+
Sbjct: 314 NKLTNPNLLKIGQILKIPAK------------LAATTMNYKVKSGDTLYSIANKYGVKVQ 361
Query: 385 EFLRLNPGVDMKAVKDNQVIKLP 453
+ N + QV+K+P
Sbjct: 362 SIVTANKLASANVITVGQVLKIP 384
[26][TOP]
>UniRef100_C6PA68 Peptidoglycan-binding LysM n=1 Tax=Thermoanaerobacterium
thermosaccharolyticum DSM 571 RepID=C6PA68_CLOTS
Length = 116
Score = 57.4 bits (137), Expect = 5e-07
Identities = 37/111 (33%), Positives = 57/111 (51%)
Frame = +1
Query: 121 RPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGG 300
R YT+ GDTL I++K + V+ I+ NP + P +++ GQ I LP + E G
Sbjct: 8 RYYTIAPGDTLWLISQKINRPVEDIIKENPGIDPNRLMVGQVICLPPIIPYGKTTECPTG 67
Query: 301 IGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
I + + G+TL ++ G + D+ L LNP +D + QVI LP
Sbjct: 68 I-----YWEVAPGDTLYKIAKTVGTTVDKILALNPYIDPDNLMVGQVICLP 113
[27][TOP]
>UniRef100_C3QYS0 LysM-repeat domain-containing protein n=1 Tax=Bacteroides sp. 2_2_4
RepID=C3QYS0_9BACE
Length = 588
Score = 57.4 bits (137), Expect = 5e-07
Identities = 37/112 (33%), Positives = 59/112 (52%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
+T+ KG +L SI+K +VT I+ +NP K+ GQTI +P K S + G
Sbjct: 32 HTIEKGQSLYSISKMYNVTTSDIIRLNPGCDE-KIYAGQTIKIPTGKESQK--------G 82
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDK 462
T+ + I+AGETL ++ + +S + NPG+ + + QVI +P K
Sbjct: 83 ETF--HTIQAGETLYKLTTMYNVSAKDICEANPGLSAENFRIGQVILIPQKK 132
[28][TOP]
>UniRef100_C3QGH4 LysM-repeat protein n=1 Tax=Bacteroides sp. D1 RepID=C3QGH4_9BACE
Length = 588
Score = 57.4 bits (137), Expect = 5e-07
Identities = 37/112 (33%), Positives = 59/112 (52%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
+T+ KG +L SI+K +VT I+ +NP K+ GQTI +P K S + G
Sbjct: 32 HTIEKGQSLYSISKMYNVTTSDIIRLNPGCDE-KIYAGQTIKIPTGKESQK--------G 82
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDK 462
T+ + I+AGETL ++ + +S + NPG+ + + QVI +P K
Sbjct: 83 ETF--HTIQAGETLYKLTTMYNVSAKDICEANPGLSAENFRIGQVILIPQKK 132
[29][TOP]
>UniRef100_A7M0S3 Putative uncharacterized protein n=1 Tax=Bacteroides ovatus ATCC
8483 RepID=A7M0S3_BACOV
Length = 225
Score = 57.4 bits (137), Expect = 5e-07
Identities = 37/112 (33%), Positives = 59/112 (52%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
+T+ KG +L SI+K +VT I+ +NP K+ GQTI +P K S + G
Sbjct: 32 HTIEKGQSLYSISKMYNVTTSDIIRLNPGCDE-KIYAGQTIKIPTGKESQK--------G 82
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDK 462
T+ + I+AGETL ++ + +S + NPG+ + + QVI +P K
Sbjct: 83 ETF--HTIQAGETLYKLTTMYNVSAKDICEANPGLSAENFRIGQVILIPQKK 132
[30][TOP]
>UniRef100_A5ZDI5 Putative uncharacterized protein n=1 Tax=Bacteroides caccae ATCC
43185 RepID=A5ZDI5_9BACE
Length = 586
Score = 57.4 bits (137), Expect = 5e-07
Identities = 36/112 (32%), Positives = 60/112 (53%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
+T+ KG +L SI+K +VT I+ +NP K+ GQTI +P K + + G
Sbjct: 32 HTIEKGQSLYSISKMYNVTTSDIIRLNPGCDE-KIYAGQTIKIPKGKDTQK--------G 82
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDK 462
T+ + I+AGETL ++ + +S NPG+ + + QVI +P++K
Sbjct: 83 ETF--HTIQAGETLYKLTTMYNVSAKAICEANPGLSAENFRIGQVILIPLEK 132
[31][TOP]
>UniRef100_C9KW75 LysM domain protein n=1 Tax=Bacteroides finegoldii DSM 17565
RepID=C9KW75_9BACE
Length = 587
Score = 57.0 bits (136), Expect = 7e-07
Identities = 37/109 (33%), Positives = 58/109 (53%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
+T+ KG +L SI+K +VT I+ +NP K+ GQTI +P K S + G
Sbjct: 32 HTIEKGQSLYSISKMYNVTTSDIIHLNPGCDE-KIYAGQTIKIPKGKESQK--------G 82
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
T+ + I+AGETL ++ + IS + NPG+ + + QVI +P
Sbjct: 83 ETF--HTIQAGETLYKLTTMYNISAKDICEANPGLSAENFRIGQVILIP 129
[32][TOP]
>UniRef100_Q8AA88 LysM-repeat protein n=1 Tax=Bacteroides thetaiotaomicron
RepID=Q8AA88_BACTN
Length = 588
Score = 56.6 bits (135), Expect = 9e-07
Identities = 37/112 (33%), Positives = 60/112 (53%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
+T+ KG +L SIAK +VT + I+ +NP K+ GQ I +P K S + G
Sbjct: 32 HTIEKGQSLYSIAKMYNVTTNDIIRLNPGCDE-KIYAGQAIKIPKGKESQK--------G 82
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDK 462
T+ + I+AGETL ++ + IS NPG+ + + QVI +P+++
Sbjct: 83 ETF--HTIQAGETLYKLTTIYNISAKAICEANPGLSAENFRIGQVILIPLEQ 132
[33][TOP]
>UniRef100_C6IH17 LysM-repeat protein n=1 Tax=Bacteroides sp. 1_1_6
RepID=C6IH17_9BACE
Length = 588
Score = 56.6 bits (135), Expect = 9e-07
Identities = 37/112 (33%), Positives = 60/112 (53%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
+T+ KG +L SIAK +VT + I+ +NP K+ GQ I +P K S + G
Sbjct: 32 HTIEKGQSLYSIAKMYNVTTNDIIRLNPGCDE-KIYAGQAIKIPKGKESQK--------G 82
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDK 462
T+ + I+AGETL ++ + IS NPG+ + + QVI +P+++
Sbjct: 83 ETF--HTIQAGETLYKLTTIYNISAKAICEANPGLSAENFRIGQVILIPLEQ 132
[34][TOP]
>UniRef100_Q3SIA9 Peptidoglycan-binding protein LysM n=1 Tax=Thiobacillus
denitrificans ATCC 25259 RepID=Q3SIA9_THIDA
Length = 501
Score = 56.2 bits (134), Expect = 1e-06
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 5/124 (4%)
Frame = +1
Query: 121 RPYTLRKGDTLESIAKKRSVTVDQILGINP-DVKPGKVVEGQTILLPAQKLSDRDREILG 297
+PY RKG+ E IA++ V+V ++ N ++ G++ QT+L+P ++ RD I
Sbjct: 341 QPYAARKGERPEEIARRFKVSVARLAEHNQFKLRRGRLARAQTVLVPVKR---RDTGIAA 397
Query: 298 GIGTTYRVYP----IRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDKF 465
+ R P ++AGETL V + G+S E NPGV + ++ QV++L I
Sbjct: 398 NQSGSRRPAPTEHEVKAGETLYGVARRYGLSARELADANPGVGAR-LRPGQVLQLAIPVS 456
Query: 466 TVRE 477
+ RE
Sbjct: 457 SPRE 460
[35][TOP]
>UniRef100_A3DJS4 ErfK/YbiS/YcfS/YnhG n=3 Tax=Clostridium thermocellum
RepID=A3DJS4_CLOTH
Length = 230
Score = 56.2 bits (134), Expect = 1e-06
Identities = 34/111 (30%), Positives = 56/111 (50%)
Frame = +1
Query: 124 PYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGI 303
PYT++ GDTL +IA+ TV I+ NPD+ P + GQ I +P +I
Sbjct: 15 PYTIKAGDTLAAIARIYGTTVQDIINANPDIDPYYLRVGQQICIPL------TMQIYPSC 68
Query: 304 GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPI 456
TT Y +R +TL + + I+ + L N G+D + +Q++ +P+
Sbjct: 69 PTT-NYYVVRPEDTLESIAAYFNITPQQLLYSNYGIDPTDLYVDQILCIPV 118
[36][TOP]
>UniRef100_C4XNJ9 Putative uncharacterized protein n=1 Tax=Desulfovibrio magneticus
RS-1 RepID=C4XNJ9_DESMR
Length = 458
Score = 55.8 bits (133), Expect = 1e-06
Identities = 42/151 (27%), Positives = 66/151 (43%), Gaps = 14/151 (9%)
Frame = +1
Query: 10 KPTRTTMQSLRASPRLSSVRACSSRQRLVVKAASFDVRPYTLRKGDTLESIAKKRSVTVD 189
+PT ++ A R ++ +S A S YT++KGD+L IA K V+VD
Sbjct: 97 EPTSPKERAAEARDREKEKKSATSSTGAPAPAPSGHGGSYTVKKGDSLGGIAAKHGVSVD 156
Query: 190 QILGINPDVKPGKVVEGQTILL--------------PAQKLSDRDREILGGIGTTYRVYP 327
+L N ++KP K++ G ++L P +K S + + T +
Sbjct: 157 DLLKANKNLKPNKMLIGDVLVLPGGAPAKADHAKPEPGEKPSAKSAKSTESHDATIS-HT 215
Query: 328 IRAGETLSEVLSKRGISTDEFLRLNPGVDMK 420
+R ET V + IS E RLNP + K
Sbjct: 216 VRKNETPDSVAKRYHISVKELARLNPDMGKK 246
[37][TOP]
>UniRef100_A9WRF5 Putative endopeptidase lytE n=1 Tax=Renibacterium salmoninarum ATCC
33209 RepID=A9WRF5_RENSM
Length = 462
Score = 55.8 bits (133), Expect = 1e-06
Identities = 35/119 (29%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Frame = +1
Query: 97 VKAASFDVRPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSD 276
+K A+ YT+R GDT+ SIA + + V+ +L +N + + GQ I L +
Sbjct: 96 IKPAAPSSSTYTVRAGDTISSIAARNGLNVNDVLSLNSLGQTSLIFPGQQIKLTGVAAAA 155
Query: 277 RDREILGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKA-VKDNQVIKL 450
+ Y +RAG+T+S + +K G+ ++ LRLN G+ M + ++ QV++L
Sbjct: 156 APAAGPSAPASGTASYTVRAGDTVSAIAAKNGLKLNDVLRLN-GLGMTSIIRPGQVLQL 213
[38][TOP]
>UniRef100_Q2RJ04 Peptidoglycan-binding LysM n=1 Tax=Moorella thermoacetica ATCC
39073 RepID=Q2RJ04_MOOTA
Length = 307
Score = 55.1 bits (131), Expect = 3e-06
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVK-PGKVVEGQTILLPAQKLSDRDREILGGI 303
YT++ GDT+ +IA+K +V++D ++ NP +K P + GQ + +PA
Sbjct: 86 YTVQPGDTMYTIAQKFNVSLDALIAANPQIKDPNLIYPGQVLCIPASAPVTCPNGF---- 141
Query: 304 GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGV-DMKAVKDNQVIKLPI 456
+Y +R G+TLS + S G + D+ + NP + D + Q + +P+
Sbjct: 142 -----IYVVRPGDTLSGIASMFGTTVDQIMAANPHIKDPNLIYPGQRLCIPL 188
[39][TOP]
>UniRef100_Q5KX83 Spore peptidoglycan hydrolase (N-acetylglucosaminidase) n=1
Tax=Geobacillus kaustophilus RepID=Q5KX83_GEOKA
Length = 470
Score = 54.7 bits (130), Expect = 3e-06
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 10/154 (6%)
Frame = +1
Query: 52 RLSSVRACSSRQRLVVKAASFDVRPY---TLRKGDTLESIAKKRSVTVDQILGINPDVKP 222
R+ + S RL V A PY T+R G+TL IA++ V V+ I+ N P
Sbjct: 25 RIVAANELSDPNRLAVGQALVIPVPYRYHTVRTGETLWQIARQYGVAVEAIIQANRITNP 84
Query: 223 GKVVEGQTILLPAQKLSDRDREILGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLN 402
+ G T+ +PA R++ +R+GETL+++ S G++ + + +N
Sbjct: 85 SLLYPGTTLFIPA------------------RIHTVRSGETLAQIASFYGVTVQQLIEVN 126
Query: 403 PGVDMKAVKDNQVIKLP-------IDKFTVRERE 483
D + Q + +P ++ FTV + E
Sbjct: 127 DITDPNRIAPGQRLIIPPAKPLIEVNAFTVDQGE 160
[40][TOP]
>UniRef100_C6J4P5 Peptidoglycan-binding LysM n=1 Tax=Paenibacillus sp. oral taxon 786
str. D14 RepID=C6J4P5_9BACL
Length = 226
Score = 54.7 bits (130), Expect = 3e-06
Identities = 33/110 (30%), Positives = 54/110 (49%)
Frame = +1
Query: 124 PYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGI 303
PYT++ GDTL IA + +V +IL NP + P + GQ I +P+ + R
Sbjct: 16 PYTVQPGDTLNIIAFRLESSVTRILAANPGLDPNNLQIGQVISIPSCPPNHVSR------ 69
Query: 304 GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
I G+TL ++ + G++ L NPGVD +++ Q + +P
Sbjct: 70 -------IIERGDTLYQIAQEYGVTVASILEANPGVDPNSLRVGQRLCIP 112
[41][TOP]
>UniRef100_B7R8M4 LysM domain protein n=2 Tax=Thermoanaerobacteraceae
RepID=B7R8M4_9THEO
Length = 324
Score = 54.7 bits (130), Expect = 3e-06
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 2/125 (1%)
Frame = +1
Query: 85 QRLVVKAASFDVRPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQ 264
QRL++ YT++ GDT+ SIA+K +V + I+ IN P + GQ + +P
Sbjct: 46 QRLIIPVQG---NYYTVQPGDTVYSIAQKFNVPYESIIYINNLSYPYNIYPGQRLFIPGI 102
Query: 265 KLSDRDREI--LGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQ 438
++ + + G + Y ++ G+TL + K GIS DE +R N V+ + Q
Sbjct: 103 SMNYPPSPVPPIPSSGPCPKYYTVQPGDTLWSIAQKFGISIDELIRANYLVNPGMIYPGQ 162
Query: 439 VIKLP 453
+ +P
Sbjct: 163 TLIIP 167
[42][TOP]
>UniRef100_B6W054 Putative uncharacterized protein n=1 Tax=Bacteroides dorei DSM
17855 RepID=B6W054_9BACE
Length = 621
Score = 54.7 bits (130), Expect = 3e-06
Identities = 37/142 (26%), Positives = 77/142 (54%)
Frame = +1
Query: 28 MQSLRASPRLSSVRACSSRQRLVVKAASFDVRPYTLRKGDTLESIAKKRSVTVDQILGIN 207
M+ +RA ++++ A S+ ++++ + + +T+ KG +L SIA +VT I+ +N
Sbjct: 20 MKFIRALYLIAALSASSTGMMAQIQSSGYFL--HTITKGQSLYSIASMYNVTTGDIVKMN 77
Query: 208 PDVKPGKVVEGQTILLPAQKLSDRDREILGGIGTTYRVYPIRAGETLSEVLSKRGISTDE 387
P K+ G+T+ +P QK S ++++ + I++GETL ++ + G++
Sbjct: 78 PG-SDQKIKTGETLKIP-QKNSGTEQQMF---------HTIQSGETLYKLTQRYGVTAQR 126
Query: 388 FLRLNPGVDMKAVKDNQVIKLP 453
+ NPG+ + + QVI +P
Sbjct: 127 ICQANPGLSAENFRIGQVIVIP 148
[43][TOP]
>UniRef100_B3JFZ6 Putative uncharacterized protein n=1 Tax=Bacteroides coprocola DSM
17136 RepID=B3JFZ6_9BACE
Length = 592
Score = 54.7 bits (130), Expect = 3e-06
Identities = 35/119 (29%), Positives = 61/119 (51%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
+T+ KG +L SIA V+VD I+ +NP K ++ GQ + +P + S+ D +
Sbjct: 33 HTVTKGQSLYSIASMYHVSVDDIVRLNPGSKE-QIRAGQALKIPQAQYSNEDGK------ 85
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDKFTVRERE 483
+ + I+AGETL ++ K ++ + NPG+ + + QVI +P T + E
Sbjct: 86 ---QFHTIQAGETLYQLTLKYHVTAQAICKANPGLSAENFRIGQVIVIPAQDNTPAQTE 141
[44][TOP]
>UniRef100_C4XNT8 Putative uncharacterized protein n=1 Tax=Desulfovibrio magneticus
RS-1 RepID=C4XNT8_DESMR
Length = 326
Score = 54.3 bits (129), Expect = 4e-06
Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 1/113 (0%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
Y ++KGD+LE IAK + TV I NP + + TI LP + ++ +
Sbjct: 194 YRVKKGDSLERIAKTQGTTVAAIEAANPGLTDKNLKADATIKLPGKSGDKPAKKPAAPLP 253
Query: 307 T-TYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDK 462
Y Y ++ GE LS+V + G + + + NP ++ ++ V+++P+ K
Sbjct: 254 PGQYIEYTVKEGEILSKVANAHGARSRDVIAANPDIEPDNIRPGTVLRIPVKK 306
[45][TOP]
>UniRef100_C9RZ52 Peptidoglycan-binding lysin domain protein n=2 Tax=Geobacillus
RepID=C9RZ52_9BACI
Length = 470
Score = 54.3 bits (129), Expect = 4e-06
Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 10/154 (6%)
Frame = +1
Query: 52 RLSSVRACSSRQRLVVKAASFDVRPY---TLRKGDTLESIAKKRSVTVDQILGINPDVKP 222
R+ + S RL V A PY T+R G+TL IA++ V V+ I+ N P
Sbjct: 25 RIVAANELSDPNRLAVGQALVIPVPYRYHTVRTGETLWQIARQYGVAVEAIIQANRITNP 84
Query: 223 GKVVEGQTILLPAQKLSDRDREILGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLN 402
+ G T+ +PA R++ +R+GETL+++ S G++ + + +N
Sbjct: 85 SLLYPGTTLFIPA------------------RIHTVRSGETLAQIASFYGVTVQQLIEVN 126
Query: 403 PGVDMKAVKDNQVIKLP-------IDKFTVRERE 483
D + Q + +P ++ FTV + E
Sbjct: 127 DITDPNRIVPGQRLIIPPAKPLIEVNAFTVDQGE 160
[46][TOP]
>UniRef100_B5EFL3 NLP/P60 protein n=1 Tax=Geobacter bemidjiensis Bem
RepID=B5EFL3_GEOBB
Length = 342
Score = 53.9 bits (128), Expect = 6e-06
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 1/121 (0%)
Frame = +1
Query: 91 LVVKAASFDVRPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTIL-LPAQK 267
L V + +F + + ++K +TL S+AKK VTV+++ N V G V+ + +L +PA+
Sbjct: 15 LSVPSLAFAAKTHRVKKHETLYSLAKKYHVTVEELKAANNLV--GNSVKPRVVLVIPARS 72
Query: 268 LSDRDREILGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIK 447
+S+ E T Y ++ E+LS + K G+S E RLN G+ VK +V+
Sbjct: 73 VSEGRNETASSDAT----YKVKKSESLSRISKKTGVSVAELKRLN-GLSSSRVKAGKVLV 127
Query: 448 L 450
L
Sbjct: 128 L 128
[47][TOP]
>UniRef100_C0CTG0 Putative uncharacterized protein n=1 Tax=Clostridium asparagiforme
DSM 15981 RepID=C0CTG0_9CLOT
Length = 385
Score = 53.9 bits (128), Expect = 6e-06
Identities = 32/109 (29%), Positives = 50/109 (45%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
YT+R GDTL +IA++ TV ++ N P + GQ + +P G
Sbjct: 238 YTVRPGDTLWAIARRFGTTVQDLVRANNIADPNLIYPGQVLTIP-------------GHD 284
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
VY +R G+TL + + G + E + LN D + QV++LP
Sbjct: 285 DMQAVYTVRPGDTLWAIAQRFGTTVQELVNLNGIADPDLIYPGQVLRLP 333
[48][TOP]
>UniRef100_C3Q0P9 LysM-repeat domain-containing protein n=2 Tax=Bacteroides
RepID=C3Q0P9_9BACE
Length = 602
Score = 53.5 bits (127), Expect = 7e-06
Identities = 37/142 (26%), Positives = 76/142 (53%)
Frame = +1
Query: 28 MQSLRASPRLSSVRACSSRQRLVVKAASFDVRPYTLRKGDTLESIAKKRSVTVDQILGIN 207
M+ +RA ++++ A S+ +++ + + +T+ KG +L SIA +VT I+ +N
Sbjct: 1 MKFIRALYLIAALSASSTGMMAQTQSSGYFL--HTITKGQSLYSIASMYNVTTGDIVKMN 58
Query: 208 PDVKPGKVVEGQTILLPAQKLSDRDREILGGIGTTYRVYPIRAGETLSEVLSKRGISTDE 387
P K+ G+T+ +P QK S ++++ + I++GETL ++ + G++
Sbjct: 59 PG-SDQKIKTGETLKIP-QKNSGTEQQMF---------HTIQSGETLYKLTQRYGVTAQR 107
Query: 388 FLRLNPGVDMKAVKDNQVIKLP 453
+ NPG+ + + QVI +P
Sbjct: 108 ICQANPGLSAENFRIGQVIVIP 129
[49][TOP]
>UniRef100_C2EUJ4 N-acetylmuramoyl-L-alanine amidase (Cell wall hydrolase)
(Autolysin) n=1 Tax=Lactobacillus vaginalis ATCC 49540
RepID=C2EUJ4_9LACO
Length = 652
Score = 53.5 bits (127), Expect = 7e-06
Identities = 29/108 (26%), Positives = 53/108 (49%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
YT++ GDTL IA K + + +N P ++ GQ + L A + +
Sbjct: 417 YTVQSGDTLSGIANKFGTNYESLASLNNISNPNRIYVGQVLKLSANSTTANSTHQVTTST 476
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKL 450
T+ Y ++AG++LS + ++ G+S + RLN + + QV++L
Sbjct: 477 TSAGSYTVKAGDSLSAIAARYGMSYETLARLNNIANPNRIYVGQVLRL 524
Score = 53.1 bits (126), Expect = 1e-05
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 4/128 (3%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGI- 303
YT++ GDTL IA + S TV+ + +N P ++ GQ +L+ Q S +
Sbjct: 348 YTVQSGDTLSGIANRYSTTVNHLASLNDISNPNRIYVGQRLLVRQQASSQTNTNTSSNTA 407
Query: 304 ---GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPIDKFTVR 474
+ Y +++G+TLS + +K G + + LN + + QV+KL + T
Sbjct: 408 NISSSATGTYTVQSGDTLSGIANKFGTNYESLASLNNISNPNRIYVGQVLKLSANSTTAN 467
Query: 475 EREMLIGS 498
+ S
Sbjct: 468 STHQVTTS 475
[50][TOP]
>UniRef100_A6ESK5 LysM-repeat protein n=1 Tax=unidentified eubacterium SCB49
RepID=A6ESK5_9BACT
Length = 669
Score = 53.5 bits (127), Expect = 7e-06
Identities = 34/111 (30%), Positives = 59/111 (53%)
Frame = +1
Query: 121 RPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGG 300
R + + G+T+ +I+KK +V+ IL +NPD K G V E I+LP + D G
Sbjct: 56 RSHIVENGETISTISKKYNVSEKAILKLNPDAKDG-VREHAVIILP-----NNDVIAKPG 109
Query: 301 IGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
G ++ V+ +R ETL + + +S D+ + N + + ++ N IK+P
Sbjct: 110 SGISFVVHKVRRKETLFSLSKEYNVSIDDIKKYNKQLYSENLRKNDRIKIP 160
[51][TOP]
>UniRef100_A4CNA8 LysM-repeat protein n=1 Tax=Robiginitalea biformata HTCC2501
RepID=A4CNA8_9FLAO
Length = 713
Score = 53.5 bits (127), Expect = 7e-06
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 10/141 (7%)
Frame = +1
Query: 97 VKAASFDVRPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTIL-------- 252
VKA F + +++G+TL SIA++ V+ ++L N +V P + TIL
Sbjct: 21 VKAQQFST--HAVKRGETLYSIARQYQVSPQELLKYNKEVDPDGTLRPNTILVIPGRAGN 78
Query: 253 --LPAQKLSDRDREILGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAV 426
L +SD D + T+R + +R ETL + + +S +E R NP + + +
Sbjct: 79 TVLNRPTVSDPDSTAREQV--TFRTHRVRRKETLFSITQRYQVSEEEVKRYNPDLYSRPL 136
Query: 427 KDNQVIKLPIDKFTVREREML 489
+ V+++P + RE E L
Sbjct: 137 QRGMVLRIPQFSESYREAEAL 157
Score = 53.5 bits (127), Expect = 7e-06
Identities = 34/113 (30%), Positives = 60/113 (53%), Gaps = 2/113 (1%)
Frame = +1
Query: 121 RPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGG 300
R + +R+ +TL SI ++ V+ +++ NPD+ + G + +P S R+ E L
Sbjct: 100 RTHRVRRKETLFSITQRYQVSEEEVKRYNPDLYSRPLQRGMVLRIPQFSESYREAEALEE 159
Query: 301 IGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKA--VKDNQVIKLP 453
+ TTY V +A ET + K GI+ D L+LNPG+ + + Q +++P
Sbjct: 160 LLTTYTV---QAKETRWSIAHKYGITIDSLLQLNPGLPRSTSYLAEGQELQVP 209
[52][TOP]
>UniRef100_A3XNA1 LysM-repeat protein n=1 Tax=Leeuwenhoekiella blandensis MED217
RepID=A3XNA1_9FLAO
Length = 658
Score = 53.5 bits (127), Expect = 7e-06
Identities = 30/109 (27%), Positives = 60/109 (55%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
+ +R+G+T+ +IA K +VTV +I +NP+ K K+ G ++LP K + E+
Sbjct: 28 HQVREGETVSTIANKYNVTVYEIYRLNPEAK-AKLYPGLVLILPGGKSAPGGSEL--SAD 84
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLP 453
+ ++ + GETL ++ K +S E R N + +++ +++K+P
Sbjct: 85 GKFVLHTVAKGETLYKLSKKYDVSESEIKRYNKHLYSAELRNGEIVKIP 133
[53][TOP]
>UniRef100_B7SSN6 Lysozyme n=1 Tax=Bacillus phage Nf RepID=B7SSN6_BPNF
Length = 262
Score = 53.5 bits (127), Expect = 7e-06
Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 1/96 (1%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVK-PGKVVEGQTILLPAQKLSDRDREILGGI 303
Y + KGD+L IA K TV+++L +NP +K P K+ GQ I + +
Sbjct: 165 YVVEKGDSLSEIATKNKTTVERLLRLNPHIKNPNKIYVGQNINTGSP------------V 212
Query: 304 GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGV 411
+T + Y I+ GETLS V K + + ++LNP +
Sbjct: 213 KSTLK-YKIKRGETLSGVAKKNKTTVSQLMKLNPSI 247
[54][TOP]
>UniRef100_Q65PK4 Glycoside hydrolase, family 18, YaaH n=1 Tax=Bacillus licheniformis
ATCC 14580 RepID=Q65PK4_BACLD
Length = 439
Score = 53.1 bits (126), Expect = 1e-05
Identities = 31/102 (30%), Positives = 54/102 (52%)
Frame = +1
Query: 97 VKAASFDVRPYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSD 276
++ +F ++ Y +++GDTL IA + TV++I+ N P ++V GQTI++P
Sbjct: 1 MRKEAFPIQIYVVKRGDTLYQIANRYRTTVNEIVATNEIPNPNRLVVGQTIVIP------ 54
Query: 277 RDREILGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLN 402
I G Y +R G+TL+ + ++ IS E R+N
Sbjct: 55 ----IAG------EFYEVRQGDTLASIGARFNISPAELARIN 86
[55][TOP]
>UniRef100_C1DVB3 Lipoprotein n=1 Tax=Sulfurihydrogenibium azorense Az-Fu1
RepID=C1DVB3_SULAA
Length = 440
Score = 53.1 bits (126), Expect = 1e-05
Identities = 33/110 (30%), Positives = 57/110 (51%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEGQTILLPAQKLSDRDREILGGIG 306
Y ++KGDTLE IAKK +V+++ I N K+ EG + +P + ++ + +
Sbjct: 25 YEVKKGDTLEKIAKKYNVSIEDIKKANNIKDEKKLREGMKLKIPVKTSKQEKKKKVEVVE 84
Query: 307 TTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMKAVKDNQVIKLPI 456
TY V + G+TL + K GI+ E + N D K ++ +K+P+
Sbjct: 85 ETYTV---KKGDTLETIAKKYGITVKEIMDYNNMKDEKIFAGDE-LKIPL 130
[56][TOP]
>UniRef100_B8E5A3 MLTD_N domain protein n=1 Tax=Shewanella baltica OS223
RepID=B8E5A3_SHEB2
Length = 515
Score = 53.1 bits (126), Expect = 1e-05
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 3/134 (2%)
Frame = +1
Query: 70 ACSSRQRLVVK--AASFDVR-PYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEG 240
A S++Q+L K AA+ + Y ++ GDTL IA+ VTV Q+ N K K+ G
Sbjct: 383 ALSTQQQLPKKSHAATESTKIAYQVKSGDTLSEIAQAHKVTVKQLSVWNKLGKSDKLQNG 442
Query: 241 QTILLPAQKLSDRDREILGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMK 420
Q +++ A K ++ +I Y +++G++L+ + SK ++ E L N +
Sbjct: 443 QKLVILAPKNLEQTAQI------RTVSYKVKSGDSLARIASKFNVTVAELLEWNSLAQSQ 496
Query: 421 AVKDNQVIKLPIDK 462
++ QVIKL +D+
Sbjct: 497 YLQPGQVIKLVVDE 510
[57][TOP]
>UniRef100_A9L0E8 MLTD_N domain protein n=1 Tax=Shewanella baltica OS195
RepID=A9L0E8_SHEB9
Length = 515
Score = 53.1 bits (126), Expect = 1e-05
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 3/134 (2%)
Frame = +1
Query: 70 ACSSRQRLVVK--AASFDVR-PYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEG 240
A S++Q+L K AA+ + Y ++ GDTL IA+ VTV Q+ N K K+ G
Sbjct: 383 ALSNQQQLPKKSHAATESTKIAYQVKSGDTLSEIAQAHKVTVKQLSVWNKLGKSDKLQNG 442
Query: 241 QTILLPAQKLSDRDREILGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMK 420
Q +++ A K ++ +I Y +++G++L+ + SK ++ E L N +
Sbjct: 443 QKLVILAPKNLEQTAQI------RTVSYKVKSGDSLARIASKFNVTVAELLEWNSLAQSQ 496
Query: 421 AVKDNQVIKLPIDK 462
++ QVIKL +D+
Sbjct: 497 YLQPGQVIKLVVDE 510
[58][TOP]
>UniRef100_A6WMW4 MLTD_N domain protein n=1 Tax=Shewanella baltica OS185
RepID=A6WMW4_SHEB8
Length = 515
Score = 53.1 bits (126), Expect = 1e-05
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 3/134 (2%)
Frame = +1
Query: 70 ACSSRQRLVVK--AASFDVR-PYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEG 240
A S++Q+L K AA+ + Y ++ GDTL IA+ VTV Q+ N K K+ G
Sbjct: 383 ALSTQQQLPKKSHAATESTKIAYQVKSGDTLSEIAQAHKVTVKQLSVWNKLGKSDKLQNG 442
Query: 241 QTILLPAQKLSDRDREILGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMK 420
Q +++ A K ++ +I Y +++G++L+ + SK ++ E L N +
Sbjct: 443 QQLVILAPKNLEQTAQI------RTVSYKVKSGDSLARIASKFNVTVAELLEWNSLAQSQ 496
Query: 421 AVKDNQVIKLPIDK 462
++ QVIKL +D+
Sbjct: 497 YLQPGQVIKLVVDE 510
[59][TOP]
>UniRef100_A6L4R8 LysM-repeat domain-containing protein n=1 Tax=Bacteroides vulgatus
ATCC 8482 RepID=A6L4R8_BACV8
Length = 621
Score = 53.1 bits (126), Expect = 1e-05
Identities = 37/143 (25%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Frame = +1
Query: 28 MQSLRASPRLSSVRACSSRQRLVVKAASFDVRPYTLRKGDTLESIAKKRSVTVDQILGIN 207
M+ +RA ++++ A S+ +++ + + +T+ KG +L SIA +VT I+ +N
Sbjct: 20 MKFIRALYLIAALSASSTGMMAQTQSSGYFL--HTITKGQSLYSIASMYNVTTGDIVKMN 77
Query: 208 PDVKPGKVVEGQTILLPAQKLSDRDREILGGIGTTYRVY-PIRAGETLSEVLSKRGISTD 384
P K+ G+T+ +P + IGT +++ I++GETL ++ + G++
Sbjct: 78 PG-SDQKIKTGETLKIPQK-----------NIGTEQQMFHTIQSGETLYKLTQRYGVTAQ 125
Query: 385 EFLRLNPGVDMKAVKDNQVIKLP 453
+ NPG+ + + QVI +P
Sbjct: 126 RICQANPGLSAENFRIGQVIVIP 148
[60][TOP]
>UniRef100_A3D436 MLTD_N domain protein n=1 Tax=Shewanella baltica OS155
RepID=A3D436_SHEB5
Length = 519
Score = 53.1 bits (126), Expect = 1e-05
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 3/134 (2%)
Frame = +1
Query: 70 ACSSRQRLVVK--AASFDVR-PYTLRKGDTLESIAKKRSVTVDQILGINPDVKPGKVVEG 240
A S++Q+L K AA+ + Y ++ GDTL IA+ VTV Q+ N K K+ G
Sbjct: 387 ALSTQQQLPKKSHAATESTKIAYQVKSGDTLSEIAQAHKVTVKQLSVWNKLGKSDKLQNG 446
Query: 241 QTILLPAQKLSDRDREILGGIGTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGVDMK 420
Q +++ A K ++ +I Y +++G++L+ + SK ++ E L N +
Sbjct: 447 QKLVILAPKNLEQTAQI------RTVSYKVKSGDSLARIASKFNVTVAELLEWNSLAQSQ 500
Query: 421 AVKDNQVIKLPIDK 462
++ QVIKL +D+
Sbjct: 501 YLQPGQVIKLVVDE 514
[61][TOP]
>UniRef100_C6Z9R9 LysM-repeat domain-containing protein n=1 Tax=Bacteroides sp.
4_3_47FAA RepID=C6Z9R9_9BACE
Length = 602
Score = 53.1 bits (126), Expect = 1e-05
Identities = 37/143 (25%), Positives = 75/143 (52%), Gaps = 1/143 (0%)
Frame = +1
Query: 28 MQSLRASPRLSSVRACSSRQRLVVKAASFDVRPYTLRKGDTLESIAKKRSVTVDQILGIN 207
M+ +RA ++++ A S+ +++ + + +T+ KG +L SIA +VT I+ +N
Sbjct: 1 MKFIRALYLIAALSASSTGMMAQTQSSGYFL--HTITKGQSLYSIASMYNVTTGDIVKMN 58
Query: 208 PDVKPGKVVEGQTILLPAQKLSDRDREILGGIGTTYRVY-PIRAGETLSEVLSKRGISTD 384
P K+ G+T+ +P + IGT +++ I++GETL ++ + G++
Sbjct: 59 PG-SDQKIKTGETLKIPQK-----------NIGTEQQMFHTIQSGETLYKLTQRYGVTAQ 106
Query: 385 EFLRLNPGVDMKAVKDNQVIKLP 453
+ NPG+ + + QVI +P
Sbjct: 107 RICQANPGLSAENFRIGQVIVIP 129
[62][TOP]
>UniRef100_A4IMI2 Phosphatase-associated protein n=2 Tax=Geobacillus
RepID=A4IMI2_GEOTN
Length = 347
Score = 53.1 bits (126), Expect = 1e-05
Identities = 34/121 (28%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Frame = +1
Query: 127 YTLRKGDTLESIAKKRSVTVDQILGINPDV-KPGKVVEGQTILLPAQKLSDRDREILGGI 303
YT++ GDTL IAKK TV+ ++ +NP + P + +GQ + + + + +
Sbjct: 81 YTVQLGDTLSGIAKKFGTTVEALVKLNPSITNPDFIRDGQVLKVTGGQENTNTYTVRPAA 140
Query: 304 GTTYRVYPIRAGETLSEVLSKRGISTDEFLRLNPGV-DMKAVKDNQVIKLPIDKFTVRER 480
Y + G+TLSE+ +K + D L LNP + + ++ Q IK+ VR
Sbjct: 141 TAVNGQYIAQKGDTLSEIANKFQTTVDRLLSLNPQITNPNMIRVGQAIKVTGGTTAVRTE 200
Query: 481 E 483
+
Sbjct: 201 Q 201