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[1][TOP]
>UniRef100_A8JCL9 Predicted protein n=1 Tax=Chlamydomonas reinhardtii
RepID=A8JCL9_CHLRE
Length = 398
Score = 241 bits (614), Expect = 3e-62
Identities = 118/118 (100%), Positives = 118/118 (100%)
Frame = +3
Query: 3 GISTQRATQEGLPLDQVLDELMSAIQRWNCGVIVAHNLKYDLNVILSELYRRNRAQDVAR 182
GISTQRATQEGLPLDQVLDELMSAIQRWNCGVIVAHNLKYDLNVILSELYRRNRAQDVAR
Sbjct: 281 GISTQRATQEGLPLDQVLDELMSAIQRWNCGVIVAHNLKYDLNVILSELYRRNRAQDVAR 340
Query: 183 LERMEGVCTANCSKFYLGRYHKQAELLKALTDEDMRVAHDAECDAEACAKCYVALLQA 356
LERMEGVCTANCSKFYLGRYHKQAELLKALTDEDMRVAHDAECDAEACAKCYVALLQA
Sbjct: 341 LERMEGVCTANCSKFYLGRYHKQAELLKALTDEDMRVAHDAECDAEACAKCYVALLQA 398
[2][TOP]
>UniRef100_A0M5S7 DNA polymerase III subunit alpha-1 n=1 Tax=Gramella forsetii KT0803
RepID=A0M5S7_GRAFK
Length = 1461
Score = 62.0 bits (149), Expect = 3e-08
Identities = 44/125 (35%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Frame = +3
Query: 3 GISTQRATQEGLPLDQVLDELMSAIQRWNCGVIVAHNLKYDLNVILSELYRR---NRAQD 173
GIST A ++G+PLD+VL++ A+Q+ +V N+ +DLN++ +E RR N Q+
Sbjct: 67 GISTDLAKEQGVPLDEVLEKFNIALQK--SKFVVGQNVGFDLNIMGAEFIRRDFENSLQE 124
Query: 174 VARLERMEGVCTANCSKFYLGRYHK-----QAELLKALTDEDMRVAHDAECDAEACAKCY 338
+ L+ V TAN K GR K EL + L +E AH+A D EA +C+
Sbjct: 125 MPVLDTCTEV-TANLCKIPGGRGGKFKLPTLTELHEFLFEEAFGEAHNATADVEATTRCF 183
Query: 339 VALLQ 353
+ L++
Sbjct: 184 LELIR 188
[3][TOP]
>UniRef100_Q8QNF3 EsV-1-126 n=1 Tax=Ectocarpus siliculosus virus 1 RepID=Q8QNF3_ESV1
Length = 206
Score = 58.5 bits (140), Expect = 3e-07
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 8/125 (6%)
Frame = +3
Query: 3 GISTQRATQEGLPLDQVLDELMSAIQRWNCGVIVAHNLKYDLNVILSELYRRNRAQDVAR 182
GIS + + G VL + M+ + R + IVAHNL +D +V+ +EL+R + D R
Sbjct: 68 GISREVMDRYGNATKVVLSDFMADVDRSD--KIVAHNLDFDRSVVSAELFRMGSSDDARR 125
Query: 183 LERMEGVCTANC--------SKFYLGRYHKQAELLKALTDEDMRVAHDAECDAEACAKCY 338
L + +CT + + ++ K EL + L AH A CD +A KCY
Sbjct: 126 LMSFKSLCTMKSTTNLVRIPNSYGSYKWPKLEELHEFLFGHVFENAHHAMCDVDAMVKCY 185
Query: 339 VALLQ 353
LL+
Sbjct: 186 FTLLE 190
[4][TOP]
>UniRef100_Q26G93 DNA polymerase III n=1 Tax=Flavobacteria bacterium BBFL7
RepID=Q26G93_9BACT
Length = 1450
Score = 57.4 bits (137), Expect = 7e-07
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Frame = +3
Query: 3 GISTQRATQEGLPLDQVLDELMSAIQRWNCGVIVAHNLKYDLNVILSELYRRNRAQDVAR 182
GIST A Q+G+PL+++L E A+ + +V NLK+DLNV +E R A D+
Sbjct: 67 GISTALADQQGVPLEEMLSEFNIALSK--AKFVVGQNLKFDLNVTGAEFERTQIANDLQE 124
Query: 183 LERMEGVCTANCSKFYL---GRYHK-----QAELLKALTDEDMRVAHDAECDAEACAKCY 338
+ ++ CT + ++ GR K EL + L ++ AH+A D EA +C+
Sbjct: 125 IPVLD-TCTEHTAQLCQIPGGRGGKFKLPTLTELHQFLFNQPFGEAHNATADVEATTRCF 183
Query: 339 VALLQ 353
+ L++
Sbjct: 184 LELIR 188
[5][TOP]
>UniRef100_A4CGM1 DNA polymerase III, alpha subunit n=1 Tax=Robiginitalea biformata
HTCC2501 RepID=A4CGM1_9FLAO
Length = 1453
Score = 56.6 bits (135), Expect = 1e-06
Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 10/127 (7%)
Frame = +3
Query: 3 GISTQRATQEGLPLDQVLDELMSAIQRWNCGVIVAHNLKYDLNVILSELYRRNRAQDVAR 182
GIST A +EGLPL++VL+ A+ R +V N+ +D+NV+ +E Y R D
Sbjct: 67 GISTDLAREEGLPLEEVLEAFRGALSRTQ--FLVGQNVGFDINVMGAEFY---RVADEDP 121
Query: 183 LERMEGVCTANCSKFYL-----GRYHK-----QAELLKALTDEDMRVAHDAECDAEACAK 332
LE+ + T S L GR K EL L E AH+A D EA A+
Sbjct: 122 LEKFPVLDTCTESTAELCQLPGGRGGKFKLPTLTELHLHLFGEPFEEAHNATADVEATAR 181
Query: 333 CYVALLQ 353
C++ LL+
Sbjct: 182 CFLELLR 188
[6][TOP]
>UniRef100_B4SAW0 Exonuclease RNase T and DNA polymerase III n=1 Tax=Pelodictyon
phaeoclathratiforme BU-1 RepID=B4SAW0_PELPB
Length = 190
Score = 55.8 bits (133), Expect = 2e-06
Identities = 40/119 (33%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Frame = +3
Query: 3 GISTQRATQEGLPLDQVLDELMSAIQRWNCGVIVAHNLKYDLNVILSELYRRNRAQDVAR 182
GISTQRA EG PL QVL + + V+VAHN+ +D ++ SEL R
Sbjct: 67 GISTQRALLEGKPLGQVLQSFYELVA--DAEVLVAHNISFDEKIVGSELIRAGMPNS--- 121
Query: 183 LERMEGVCTANCSKF-------YLGRYHKQAELLKALTDEDMRVAHDAECDAEACAKCY 338
L +CT + Y ++ K +EL L AH+A D +A AKC+
Sbjct: 122 LPSKRKICTMESTTDFCAIKGPYGNKWPKLSELYFQLFGTVFNEAHNAASDIQATAKCF 180
[7][TOP]
>UniRef100_A8UJ80 DNA polymerase III, alpha subunit n=1 Tax=Flavobacteriales
bacterium ALC-1 RepID=A8UJ80_9FLAO
Length = 1128
Score = 55.5 bits (132), Expect = 3e-06
Identities = 38/125 (30%), Positives = 67/125 (53%), Gaps = 8/125 (6%)
Frame = +3
Query: 3 GISTQRATQEGLPLDQVLDELMSAIQRWNCGVIVAHNLKYDLNVILSELYRRNRAQDVAR 182
GIST+ A ++G+ L +VL++ +A+ + +V N+K+DLN++ +E R + A +
Sbjct: 67 GISTELAQEQGVSLSEVLEKFNTALSKTK--FVVGQNVKFDLNIMGAEFVREDVANPLQE 124
Query: 183 LERMEGVC---TANCSKFYLGRYHK-----QAELLKALTDEDMRVAHDAECDAEACAKCY 338
L ++ C TA+ + GRY K EL + L + AH+A D EA +C+
Sbjct: 125 LPVLD-TCTEHTASLCQIPGGRYGKFKLPTLTELHQFLFNTPFGEAHNATADVEATTRCF 183
Query: 339 VALLQ 353
L++
Sbjct: 184 FELIR 188
[8][TOP]
>UniRef100_Q2FLJ5 Exonuclease n=1 Tax=Methanospirillum hungatei JF-1
RepID=Q2FLJ5_METHJ
Length = 215
Score = 55.5 bits (132), Expect = 3e-06
Identities = 36/122 (29%), Positives = 60/122 (49%), Gaps = 7/122 (5%)
Frame = +3
Query: 3 GISTQRATQEGLPLDQVLDELMSAIQRWNCGVIVAHNLKYDLNVILSELYRRNRAQDVAR 182
GI+ +RA +EG P+ +VL +I++ V+V HN+ +D +++ SE R + +
Sbjct: 67 GITNERAREEGKPVLEVLSVFSESIKQ--ADVLVGHNVSFDRSIVTSEYSRAKLNAPILK 124
Query: 183 L------ERMEGVCTANCSKFYLG-RYHKQAELLKALTDEDMRVAHDAECDAEACAKCYV 341
L + VC G ++ +EL + L +E AHDA D AC +CY+
Sbjct: 125 LPYHCTMKTSTEVCKLPAKGGRRGYKWPSLSELHQFLFEEPFEHAHDASADVRACMRCYL 184
Query: 342 AL 347
L
Sbjct: 185 EL 186
[9][TOP]
>UniRef100_C6Y295 DNA polymerase III, alpha subunit n=1 Tax=Pedobacter heparinus DSM
2366 RepID=C6Y295_PEDHD
Length = 1476
Score = 54.7 bits (130), Expect = 4e-06
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Frame = +3
Query: 3 GISTQRATQEGLPLDQVLDELMSAIQRWNCGVIVAHNLKYDLNVILSELYRRNRAQDVAR 182
GIST+ AT++G+ L +VL++ A+ + +V N+ +D+N++ ELYR +A+
Sbjct: 67 GISTELATEQGIELAEVLEKFNIALSK--AKFVVGQNIGFDVNIMGCELYRLGVESPMAQ 124
Query: 183 LERMEGVC--TANCSKFYLGRYHK-----QAELLKALTDEDMRVAHDAECDAEACAKCYV 341
+ ++ TA K GR K EL + L E AH+A D EA +C++
Sbjct: 125 MPVLDTCTEITAELLKLPGGRGGKFKLPNLTELHQYLFGEPFAEAHNATADVEATTRCFL 184
Query: 342 ALLQ 353
L++
Sbjct: 185 QLIK 188
[10][TOP]
>UniRef100_UPI0001B4DF4F DNA polymerase III subunit epsilon n=1 Tax=Streptomyces lividans
TK24 RepID=UPI0001B4DF4F
Length = 244
Score = 54.3 bits (129), Expect = 6e-06
Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 10/125 (8%)
Frame = +3
Query: 3 GISTQRATQEGLPLDQVLDELMSA-IQRWNCGV-IVAHNLKYDLNVILSELYRRNRAQDV 176
GIS +RA +EG P DQV D + + + W GV +VA+N +DL ++ +EL RR+ +
Sbjct: 61 GISNERAAREGRPADQVADAIATVLVDHWKAGVPVVAYNAAFDLTLLAAEL-RRHALPSL 119
Query: 177 ARLERMEGVCTANCSKFY-----LGRYHKQAELLKALTDE---DMRVAHDAECDAEACAK 332
ER+ G+ A Y + RY + L+A+ E + AHDA DA A A+
Sbjct: 120 R--ERLGGLDPAPVIDPYTIDRSVDRYRRGKRNLEAVCREYGVRLDAAHDATADALAAAR 177
Query: 333 CYVAL 347
A+
Sbjct: 178 LACAI 182
[11][TOP]
>UniRef100_Q9ADH9 Putative DNA polymerase n=1 Tax=Streptomyces coelicolor
RepID=Q9ADH9_STRCO
Length = 244
Score = 54.3 bits (129), Expect = 6e-06
Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 10/125 (8%)
Frame = +3
Query: 3 GISTQRATQEGLPLDQVLDELMSA-IQRWNCGV-IVAHNLKYDLNVILSELYRRNRAQDV 176
GIS +RA +EG P DQV D + + + W GV +VA+N +DL ++ +EL RR+ +
Sbjct: 61 GISNERAAREGRPADQVADAIATVLVDHWKAGVPVVAYNAAFDLTLLAAEL-RRHALPSL 119
Query: 177 ARLERMEGVCTANCSKFY-----LGRYHKQAELLKALTDE---DMRVAHDAECDAEACAK 332
ER+ G+ A Y + RY + L+A+ E + AHDA DA A A+
Sbjct: 120 R--ERLGGLDPAPVIDPYTIDRSVDRYRRGKRNLEAVCREYGVRLDAAHDATADALAAAR 177
Query: 333 CYVAL 347
A+
Sbjct: 178 LACAI 182
[12][TOP]
>UniRef100_A3J3Y0 DNA polymerase III, alpha subunit n=1 Tax=Flavobacteria bacterium
BAL38 RepID=A3J3Y0_9FLAO
Length = 1512
Score = 54.3 bits (129), Expect = 6e-06
Identities = 36/124 (29%), Positives = 67/124 (54%), Gaps = 7/124 (5%)
Frame = +3
Query: 3 GISTQRATQEGLPLDQVLDELMSAIQRWNCGVIVAHNLKYDLNVILSELYRRNRAQDVAR 182
GIST+ A ++G+ L +VL++ A+ + IV N+ +D+N++ E +R N D+++
Sbjct: 67 GISTELALEQGILLSEVLEKFNIALSKTK--FIVGQNVGFDVNIMGCEFHRLNFGSDLSK 124
Query: 183 LERMEGVC--TANCSKFYLGRYHK-----QAELLKALTDEDMRVAHDAECDAEACAKCYV 341
+ ++ TAN K GR + EL + L ++ AH+A D EA +C++
Sbjct: 125 MPVLDTCTEVTANLLKLPGGRGGRFKLPTLTELHQYLFNQPFAEAHNATADVEATTRCFL 184
Query: 342 ALLQ 353
L++
Sbjct: 185 ELIK 188
[13][TOP]
>UniRef100_A6GWI1 Probable DNA polymerase III, alpha and epsilon subunits n=1
Tax=Flavobacterium psychrophilum JIP02/86
RepID=A6GWI1_FLAPJ
Length = 1508
Score = 53.9 bits (128), Expect = 7e-06
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 7/124 (5%)
Frame = +3
Query: 3 GISTQRATQEGLPLDQVLDELMSAIQRWNCGVIVAHNLKYDLNVILSELYRRNRAQDVAR 182
GIST+ A ++G+ L +VL++ A+ + IV N+ +D+N++ E YR N + D+ +
Sbjct: 67 GISTELAIEQGVSLQEVLEQFNIALSKTK--FIVGQNVGFDVNIMGCEFYRANISSDMVK 124
Query: 183 LERMEGVCTANCSKFYL-----GRYH--KQAELLKALTDEDMRVAHDAECDAEACAKCYV 341
+ ++ S L GR+ EL + L AH+A D EA +C++
Sbjct: 125 MPVLDTCTEVTASLLKLPGGRGGRFKLPTLTELHQYLFQIPFSEAHNATADVEATTRCFL 184
Query: 342 ALLQ 353
L++
Sbjct: 185 ELIK 188