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[1][TOP]
>UniRef100_A8JB55 Predicted protein n=1 Tax=Chlamydomonas reinhardtii
RepID=A8JB55_CHLRE
Length = 970
Score = 278 bits (712), Expect = 1e-73
Identities = 133/134 (99%), Positives = 133/134 (99%)
Frame = +2
Query: 2 FARAADNNTPMATTSKHGGHASGRGGAGAGAIGAGGTPLPGGFMPPLDRLDQNHYGGTPT 181
FARAADNNTPMATTSKHGGHASGRGGAGAGAIGAGGTPLPGGFMPPLDRLDQNHYGGTPT
Sbjct: 521 FARAADNNTPMATTSKHGGHASGRGGAGAGAIGAGGTPLPGGFMPPLDRLDQNHYGGTPT 580
Query: 182 PGAGAVAGTGGFGVSGATPSPAGGMTAHAGHTPGPRLALDFQSPAPSPAPSLRPSAGQDA 361
PGAGAVAGTGGFGVSGATPSPAGGMTAHAGHTPGPRLALDFQSPAPSPAPSLRPSAGQDA
Sbjct: 581 PGAGAVAGTGGFGVSGATPSPAGGMTAHAGHTPGPRLALDFQSPAPSPAPSLRPSAGQDA 640
Query: 362 GASPAPAKSGASGA 403
GASPAPAKSGAS A
Sbjct: 641 GASPAPAKSGASAA 654
[2][TOP]
>UniRef100_A8JB92 Predicted protein n=1 Tax=Chlamydomonas reinhardtii
RepID=A8JB92_CHLRE
Length = 969
Score = 271 bits (693), Expect = 2e-71
Identities = 129/134 (96%), Positives = 131/134 (97%)
Frame = +2
Query: 2 FARAADNNTPMATTSKHGGHASGRGGAGAGAIGAGGTPLPGGFMPPLDRLDQNHYGGTPT 181
FARAADNNTPMATTSKHGGHASGRGGAGAGA+GAGGTPLPGGFMPPLD LDQNHYGGTPT
Sbjct: 524 FARAADNNTPMATTSKHGGHASGRGGAGAGAVGAGGTPLPGGFMPPLDWLDQNHYGGTPT 583
Query: 182 PGAGAVAGTGGFGVSGATPSPAGGMTAHAGHTPGPRLALDFQSPAPSPAPSLRPSAGQDA 361
PGAGAV GTGGFGVSGATPSPAGGMTAHAGHT GPRLALDFQSPAPSPAPSLRPSAGQDA
Sbjct: 584 PGAGAVGGTGGFGVSGATPSPAGGMTAHAGHTSGPRLALDFQSPAPSPAPSLRPSAGQDA 643
Query: 362 GASPAPAKSGASGA 403
GASPAPA+SGASGA
Sbjct: 644 GASPAPAQSGASGA 657
[3][TOP]
>UniRef100_UPI0001B4E4AC transcriptional regulator, SARP family protein n=1 Tax=Streptomyces
hygroscopicus ATCC 53653 RepID=UPI0001B4E4AC
Length = 1279
Score = 63.2 bits (152), Expect = 9e-09
Identities = 42/129 (32%), Positives = 51/129 (39%), Gaps = 1/129 (0%)
Frame = +2
Query: 17 DNNTPMATTSKHGGHASGRGGAGAGAIGAGGTPLPGGFMPPLDRLDQNHY-GGTPTPGAG 193
D + P A + GHA G G G G+G P PG P D H GG PGAG
Sbjct: 266 DGSAPGAAYASGAGHAPGDGTGPGGGYGSGARPGPGVGHVPGDGAGAGHVPGGRTAPGAG 325
Query: 194 AVAGTGGFGVSGATPSPAGGMTAHAGHTPGPRLALDFQSPAPSPAPSLRPSAGQDAGASP 373
G+G G +GA G AG+ PG R P P + + G AGA
Sbjct: 326 HAPGSGAGGAAGARAGSGTGHDPGAGYDPGAR-----------PGPEVGHAPGDGAGAGH 374
Query: 374 APAKSGASG 400
G +G
Sbjct: 375 VSEAGGRTG 383
[4][TOP]
>UniRef100_Q5ZPC7 Putative uncharacterized protein n=1 Tax=Angiococcus disciformis
RepID=Q5ZPC7_9DELT
Length = 417
Score = 61.2 bits (147), Expect = 3e-08
Identities = 40/119 (33%), Positives = 49/119 (41%), Gaps = 4/119 (3%)
Frame = -3
Query: 399 PLAPDFAGAGLAPASWPALGRSEGAGDGAGLWKSRAKRGPGVWPACAVMPPAGDGV---- 232
P AP A G+ + P + R G G G + GPG+ P + P G G+
Sbjct: 126 PGAPTAARPGIPQGTQPGVPRPPGPGMPPGAPGAPRPPGPGMPPGPGMARPPGPGMPPPG 185
Query: 231 APDTPNPPVPATAPAPGVGVPP*WFWSSRSSGGMKPPGSGVPPAPIAPAPAPPRPLAWP 55
AP P PP P P PG+ PP GM PPG+ P P P PP A P
Sbjct: 186 APGAPRPPGPGMPPGPGMARPP--------GPGMPPPGAPGAPRPPGPGMPPPGAAARP 236
[5][TOP]
>UniRef100_UPI0000222BCC Hypothetical protein CBG04553 n=1 Tax=Caenorhabditis briggsae AF16
RepID=UPI0000222BCC
Length = 723
Score = 60.5 bits (145), Expect = 6e-08
Identities = 43/133 (32%), Positives = 55/133 (41%), Gaps = 17/133 (12%)
Frame = +2
Query: 53 GGHASGRGGAGAG---AIGAGGTPLPGGFMPPLDRLDQNHYGGTPTPGAGAVAGTGGFGV 223
GG+ASG GG G G A G GG GG+ P GG + G G+ G GG G
Sbjct: 103 GGYASGGGGGGGGGGYASGGGGGVSSGGYAKPSGG-GGGSSGGGYSSGGGSSGGGGGGGY 161
Query: 224 SGATPSPA--------------GGMTAHAGHTPGPRLALDFQSPAPSPAPSLRPSAGQDA 361
S + P+PA GG + G +PAP+PAP+ PS G +
Sbjct: 162 SQSAPAPAAAPAPAPAPAPAPSGGYASSGGGGGSSGGGYSQSAPAPAPAPAPAPSGGYAS 221
Query: 362 GASPAPAKSGASG 400
G + G G
Sbjct: 222 GGGAGGSSGGGGG 234
Score = 53.1 bits (126), Expect = 9e-06
Identities = 40/131 (30%), Positives = 55/131 (41%), Gaps = 1/131 (0%)
Frame = +2
Query: 2 FARAADNNTPMATTSKHGGHASGRGGAGAGAIGAGGTPLPGGFMPPLDR-LDQNHYGGTP 178
++++A P + GG+ASG GGAG + G GG PP + P
Sbjct: 200 YSQSAPAPAPAPAPAPSGGYASG-GGAGGSSGGGGGYSQSAPPPPPQPAPAPEPAPAPAP 258
Query: 179 TPGAGAVAGTGGFGVSGATPSPAGGMTAHAGHTPGPRLALDFQSPAPSPAPSLRPSAGQD 358
P G + GG G SG S GG + G + P P+PAP+ P+
Sbjct: 259 APSGGYASSGGGGGSSGGGYSSGGGSSGGGGGGSSGGYSQSAPPPPPAPAPAPAPA---- 314
Query: 359 AGASPAPAKSG 391
+PAPA SG
Sbjct: 315 --PAPAPAPSG 323
[6][TOP]
>UniRef100_UPI0001B4695D PE-PGRS family protein n=1 Tax=Mycobacterium tuberculosis '98-R604
INH-RIF-EM' RepID=UPI0001B4695D
Length = 505
Score = 59.7 bits (143), Expect = 1e-07
Identities = 50/141 (35%), Positives = 58/141 (41%), Gaps = 28/141 (19%)
Frame = +2
Query: 62 ASGRGGAGAGAI-GAGGTPLPGGFMPPLDRLDQNHYGGTPTPGAGAVAGTGGFGV----- 223
A G GGAG G+ GAGGT GG + GG GAGA G GG GV
Sbjct: 42 AGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAAGGAGGSGVLIGNG 101
Query: 224 ----SGATPSPAGGMTAHAGHTPGPRLALD-FQSPAPSPAPSL----------------- 337
SG T +PAG TA AG G L D F +PA +P +L
Sbjct: 102 GNGGSGGTGAPAG--TAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILNAINEPTQALTG 159
Query: 338 RPSAGQDAGASPAPAKSGASG 400
RP G A +P G +G
Sbjct: 160 RPLIGNGANGTPGTGADGGAG 180
[7][TOP]
>UniRef100_Q7U2D6 PE-PGRS FAMILY PROTEIN n=1 Tax=Mycobacterium bovis
RepID=Q7U2D6_MYCBO
Length = 831
Score = 59.7 bits (143), Expect = 1e-07
Identities = 50/141 (35%), Positives = 58/141 (41%), Gaps = 28/141 (19%)
Frame = +2
Query: 62 ASGRGGAGAGAI-GAGGTPLPGGFMPPLDRLDQNHYGGTPTPGAGAVAGTGGFGV----- 223
A G GGAG G+ GAGGT GG + GG GAGA G GG GV
Sbjct: 371 AGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAAGGAGGSGVLIGNG 430
Query: 224 ----SGATPSPAGGMTAHAGHTPGPRLALD-FQSPAPSPAPSL----------------- 337
SG T +PAG TA AG G L D F +PA +P +L
Sbjct: 431 GNGGSGGTGAPAG--TAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILNAINEPTQALTG 488
Query: 338 RPSAGQDAGASPAPAKSGASG 400
RP G A +P G +G
Sbjct: 489 RPLIGNGANGTPGTGADGGAG 509
[8][TOP]
>UniRef100_Q79FY9 PE-PGRS FAMILY PROTEIN n=1 Tax=Mycobacterium tuberculosis
RepID=Q79FY9_MYCTU
Length = 837
Score = 59.7 bits (143), Expect = 1e-07
Identities = 50/141 (35%), Positives = 58/141 (41%), Gaps = 28/141 (19%)
Frame = +2
Query: 62 ASGRGGAGAGAI-GAGGTPLPGGFMPPLDRLDQNHYGGTPTPGAGAVAGTGGFGV----- 223
A G GGAG G+ GAGGT GG + GG GAGA G GG GV
Sbjct: 374 AGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAAGGAGGSGVLIGNG 433
Query: 224 ----SGATPSPAGGMTAHAGHTPGPRLALD-FQSPAPSPAPSL----------------- 337
SG T +PAG TA AG G L D F +PA +P +L
Sbjct: 434 GNGGSGGTGAPAG--TAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILNAINEPTQALTG 491
Query: 338 RPSAGQDAGASPAPAKSGASG 400
RP G A +P G +G
Sbjct: 492 RPLIGNGANGTPGTGADGGAG 512
[9][TOP]
>UniRef100_C1AJV7 PE-PGRS family protein n=1 Tax=Mycobacterium bovis BCG str. Tokyo
172 RepID=C1AJV7_MYCBT
Length = 834
Score = 59.7 bits (143), Expect = 1e-07
Identities = 50/141 (35%), Positives = 58/141 (41%), Gaps = 28/141 (19%)
Frame = +2
Query: 62 ASGRGGAGAGAI-GAGGTPLPGGFMPPLDRLDQNHYGGTPTPGAGAVAGTGGFGV----- 223
A G GGAG G+ GAGGT GG + GG GAGA G GG GV
Sbjct: 371 AGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAAGGAGGSGVLIGNG 430
Query: 224 ----SGATPSPAGGMTAHAGHTPGPRLALD-FQSPAPSPAPSL----------------- 337
SG T +PAG TA AG G L D F +PA +P +L
Sbjct: 431 GNGGSGGTGAPAG--TAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILNAINEPTQALTG 488
Query: 338 RPSAGQDAGASPAPAKSGASG 400
RP G A +P G +G
Sbjct: 489 RPLIGNGANGTPGTGADGGAG 509
[10][TOP]
>UniRef100_A5TZ06 PE-PGRS family protein n=1 Tax=Mycobacterium tuberculosis H37Ra
RepID=A5TZ06_MYCTA
Length = 837
Score = 59.7 bits (143), Expect = 1e-07
Identities = 50/141 (35%), Positives = 58/141 (41%), Gaps = 28/141 (19%)
Frame = +2
Query: 62 ASGRGGAGAGAI-GAGGTPLPGGFMPPLDRLDQNHYGGTPTPGAGAVAGTGGFGV----- 223
A G GGAG G+ GAGGT GG + GG GAGA G GG GV
Sbjct: 374 AGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAAGGAGGSGVLIGNG 433
Query: 224 ----SGATPSPAGGMTAHAGHTPGPRLALD-FQSPAPSPAPSL----------------- 337
SG T +PAG TA AG G L D F +PA +P +L
Sbjct: 434 GNGGSGGTGAPAG--TAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILNAINEPTQALTG 491
Query: 338 RPSAGQDAGASPAPAKSGASG 400
RP G A +P G +G
Sbjct: 492 RPLIGNGANGTPGTGADGGAG 512
[11][TOP]
>UniRef100_A1KFA2 PE-PGRS family protein n=1 Tax=Mycobacterium bovis BCG str. Pasteur
1173P2 RepID=A1KFA2_MYCBP
Length = 834
Score = 59.7 bits (143), Expect = 1e-07
Identities = 50/141 (35%), Positives = 58/141 (41%), Gaps = 28/141 (19%)
Frame = +2
Query: 62 ASGRGGAGAGAI-GAGGTPLPGGFMPPLDRLDQNHYGGTPTPGAGAVAGTGGFGV----- 223
A G GGAG G+ GAGGT GG + GG GAGA G GG GV
Sbjct: 371 AGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAAGGAGGSGVLIGNG 430
Query: 224 ----SGATPSPAGGMTAHAGHTPGPRLALD-FQSPAPSPAPSL----------------- 337
SG T +PAG TA AG G L D F +PA +P +L
Sbjct: 431 GNGGSGGTGAPAG--TAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILNAINEPTQALTG 488
Query: 338 RPSAGQDAGASPAPAKSGASG 400
RP G A +P G +G
Sbjct: 489 RPLIGNGANGTPGTGADGGAG 509
[12][TOP]
>UniRef100_C6DS73 PE-PGRS family protein n=1 Tax=Mycobacterium tuberculosis KZN 1435
RepID=C6DS73_MYCTU
Length = 844
Score = 59.7 bits (143), Expect = 1e-07
Identities = 50/141 (35%), Positives = 58/141 (41%), Gaps = 28/141 (19%)
Frame = +2
Query: 62 ASGRGGAGAGAI-GAGGTPLPGGFMPPLDRLDQNHYGGTPTPGAGAVAGTGGFGV----- 223
A G GGAG G+ GAGGT GG + GG GAGA G GG GV
Sbjct: 381 AGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAAGGAGGSGVLIGNG 440
Query: 224 ----SGATPSPAGGMTAHAGHTPGPRLALD-FQSPAPSPAPSL----------------- 337
SG T +PAG TA AG G L D F +PA +P +L
Sbjct: 441 GNGGSGGTGAPAG--TAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILNAINEPTQALTG 498
Query: 338 RPSAGQDAGASPAPAKSGASG 400
RP G A +P G +G
Sbjct: 499 RPLIGNGANGTPGTGADGGAG 519
[13][TOP]
>UniRef100_A5WIZ0 PE-PGRS family protein n=1 Tax=Mycobacterium tuberculosis F11
RepID=A5WIZ0_MYCTF
Length = 837
Score = 59.7 bits (143), Expect = 1e-07
Identities = 50/141 (35%), Positives = 58/141 (41%), Gaps = 28/141 (19%)
Frame = +2
Query: 62 ASGRGGAGAGAI-GAGGTPLPGGFMPPLDRLDQNHYGGTPTPGAGAVAGTGGFGV----- 223
A G GGAG G+ GAGGT GG + GG GAGA G GG GV
Sbjct: 374 AGGAGGAGGGSFAGAGGTGGAGGAPGLVGNAGNGGNGGASANGAGAAGGAGGSGVLIGNG 433
Query: 224 ----SGATPSPAGGMTAHAGHTPGPRLALD-FQSPAPSPAPSL----------------- 337
SG T +PAG TA AG G L D F +PA +P +L
Sbjct: 434 GNGGSGGTGAPAG--TAGAGGLGGQLLGRDGFNAPASTPLHTLQQQILNAINEPTQALTG 491
Query: 338 RPSAGQDAGASPAPAKSGASG 400
RP G A +P G +G
Sbjct: 492 RPLIGNGANGTPGTGADGGAG 512
[14][TOP]
>UniRef100_Q1D3Z1 Response regulator n=1 Tax=Myxococcus xanthus DK 1622
RepID=Q1D3Z1_MYXXD
Length = 420
Score = 58.9 bits (141), Expect = 2e-07
Identities = 51/128 (39%), Positives = 56/128 (43%), Gaps = 12/128 (9%)
Frame = -3
Query: 399 PLAPDFAGAGLAPASWPALGRSEGAGDGAGLWKSRAKRGPGVWPACAV-----MPPAGDG 235
P P A G+ P P + R GAG GPG+ P A MPP G
Sbjct: 159 PAPPPGARPGVPPG--PGVPRPPGAGVPP---PGARPPGPGMPPGMARPPGPGMPPPG-- 211
Query: 234 VAPDTPNPPVPATAPA----PGVGVPP*WFWSSRSSGGMKPPGS--GVPPAPIAPAPA-P 76
AP P PP P P PG GVPP +R G PPG+ GVPP P PAP P
Sbjct: 212 -APGAPRPPGPGMPPGMARPPGPGVPP----GARPPGPGMPPGARPGVPPPPGGPAPGLP 266
Query: 75 PRPLAWPP 52
PRP PP
Sbjct: 267 PRP-GMPP 273
[15][TOP]
>UniRef100_Q73T97 Putative uncharacterized protein n=1 Tax=Mycobacterium avium subsp.
paratuberculosis RepID=Q73T97_MYCPA
Length = 690
Score = 58.5 bits (140), Expect = 2e-07
Identities = 46/127 (36%), Positives = 52/127 (40%), Gaps = 3/127 (2%)
Frame = +2
Query: 29 PMATTSKHGGHASGRGGAGAGAIGAGGTPLPGGFMPPLDRLDQNHYGGTPTPGAGAV-AG 205
P T GGH G G G G P+PG P + G PTPGAG G
Sbjct: 554 PGGTGGSGGGHVPTPGAGTPGGSGGGHLPIPGAGSTP----GGSGGGHLPTPGAGTPGGG 609
Query: 206 TGGFGVSGATPSPAGGMTAH-AGHTPGPRLALDFQSPAPSPAPSLRPSAGQDAGASPAPA 382
GGFG G P+P GG+ GH P P L +PAP G G +PAP
Sbjct: 610 LGGFG-GGHAPAPGGGLGGFGGGHAPAPGGGLGGFGGGHAPAPG-GGLGGFGGGHAPAPG 667
Query: 383 KS-GASG 400
G SG
Sbjct: 668 GGLGGSG 674
Score = 55.5 bits (132), Expect = 2e-06
Identities = 46/130 (35%), Positives = 51/130 (39%), Gaps = 14/130 (10%)
Frame = +2
Query: 53 GGHASGRGGAGAGAIGAGGTPLPG-----GFMPPLDRLDQNHYGGTPTPGAGAVAGTGGF 217
GGHA G G+G G G P PG G P + G PTPGAG GTGG
Sbjct: 501 GGHAPTPGAGGSGGSGGGHVPTPGAGGSGGGHVPTPGAGGSGGGHVPTPGAGGPGGTGGS 560
Query: 218 GVSGATPSPAGGMT--AHAGHTPGPRLALDFQSPAPSPAPSL-RPSAGQDA------GAS 370
G G P+P G + GH P P +P S L P AG G
Sbjct: 561 G-GGHVPTPGAGTPGGSGGGHLPIPGAG---STPGGSGGGHLPTPGAGTPGGGLGGFGGG 616
Query: 371 PAPAKSGASG 400
APA G G
Sbjct: 617 HAPAPGGGLG 626
[16][TOP]
>UniRef100_UPI00015B6192 PREDICTED: similar to GA13432-PA n=1 Tax=Nasonia vitripennis
RepID=UPI00015B6192
Length = 655
Score = 57.8 bits (138), Expect = 4e-07
Identities = 46/144 (31%), Positives = 56/144 (38%), Gaps = 11/144 (7%)
Frame = +2
Query: 2 FARAADNNTPMATTSKHGGHASGRG------GAGAGAIGAGGTPLPGG--FMPPLDRLDQ 157
F+ TP S G ++G GAG + GG P ++PP +
Sbjct: 113 FSSTPGFTTPRPNYSPTNGGSTGYNYPQSTFGAGGSSPSYGGYPASSSTTYLPPPSQPPT 172
Query: 158 NHYGGTPTPGAGAVAGTGGFGVSGATPSPAGGMTAHAGHTPGPR---LALDFQSPAPSPA 328
+ G P P G T GF G PSPA G G PGPR PAP PA
Sbjct: 173 SIGPGYPYPSPGN-RPTPGFPTPGGRPSPAPGPRPTPGPAPGPRPEPAPGPAPGPAPGPA 231
Query: 329 PSLRPSAGQDAGASPAPAKSGASG 400
P P+ G G +P PA A G
Sbjct: 232 PGPAPAPGPAPGPAPGPAPGPAPG 255
[17][TOP]
>UniRef100_A4WT66 TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Rhodobacter
sphaeroides ATCC 17025 RepID=A4WT66_RHOS5
Length = 656
Score = 57.8 bits (138), Expect = 4e-07
Identities = 49/113 (43%), Positives = 57/113 (50%), Gaps = 11/113 (9%)
Frame = -3
Query: 378 GAGL-APASWPALGRSEGAGDGAGLWKSRAKRGPGVWPACA---VMPPAGDGV----APD 223
G GL AP PA G G G GL + A GPGV P A P G GV AP
Sbjct: 545 GGGLGAPGGLPAPGAG-GLGTPPGLAPAPAPGGPGVPPGLAPPNAPAPGGLGVPPGLAPP 603
Query: 222 TPNPPVPATAPAP-GVGVPP*WFWSSRSSGGMKPP--GSGVPPAPIAPAPAPP 73
TP P PA APAP G+GVPP + ++G + PP G G+ P + P APP
Sbjct: 604 TPTAPAPA-APAPGGLGVPP--GLAPPATGEVTPPDAGPGLAPGGVPPGLAPP 653
[18][TOP]
>UniRef100_A0QM14 Putative uncharacterized protein n=1 Tax=Mycobacterium avium 104
RepID=A0QM14_MYCA1
Length = 644
Score = 56.2 bits (134), Expect = 1e-06
Identities = 34/87 (39%), Positives = 37/87 (42%), Gaps = 1/87 (1%)
Frame = +2
Query: 29 PMATTSKHGGHASGRGGAGAGAIGAGGTPLPGGFMPPLDRLDQNHYGGTPTPGAGAV-AG 205
P T GGH G G G G P PG P + G PTPGAG G
Sbjct: 539 PGGTGGSGGGHVPTPGAGTPGGSGGGHLPFPGAGSTP----GGSGGGHLPTPGAGTPGGG 594
Query: 206 TGGFGVSGATPSPAGGMTAHAGHTPGP 286
GGFG G P+P GG+ GH P P
Sbjct: 595 LGGFG-GGHAPAPGGGLGGGGGHAPAP 620
[19][TOP]
>UniRef100_Q9RKL5 DNA polymerase III subunit gamma n=1 Tax=Streptomyces coelicolor
RepID=Q9RKL5_STRCO
Length = 784
Score = 55.5 bits (132), Expect = 2e-06
Identities = 42/124 (33%), Positives = 50/124 (40%), Gaps = 15/124 (12%)
Frame = -3
Query: 378 GAGLAPASWPALGRSEGAGDGAGLWKSRAKRGPGVWPACA---VMPPAGDGV---APDTP 217
GAG P P+ + GAGDGAG A G P P + D AP +P
Sbjct: 435 GAGTPPGGDPSADVAAGAGDGAGAGTGPASDAGGAPPGGGHPQAAPSSADVAPVPAPPSP 494
Query: 216 NPPVPATAPAPG-VGVPP*WFWSSRSSGGMK--------PPGSGVPPAPIAPAPAPPRPL 64
P PA APAP P W ++ + GG + P G G P P APA P
Sbjct: 495 ATPSPAAAPAPAPASAPGAWPSAAPAGGGRRPGGWPTATPAGGGQPRTPAAPASGPAATA 554
Query: 63 AWPP 52
A P
Sbjct: 555 AQAP 558
[20][TOP]
>UniRef100_A8E463 HrpW n=1 Tax=Pseudomonas viridiflava RepID=A8E463_PSEVI
Length = 568
Score = 55.5 bits (132), Expect = 2e-06
Identities = 43/136 (31%), Positives = 52/136 (38%), Gaps = 13/136 (9%)
Frame = +2
Query: 29 PMATTSKHGGHASGRGGAGA----GAIGAGGTPLPGGFMPPLDRLDQNHYGGTPTPGAGA 196
P SK GG G GG G G G GG P GG GG+P+ G G
Sbjct: 242 PSDGASKGGGGGGGGGGGGGVAPTGTGGGGGAPSVGG----------GGGGGSPSVGGGG 291
Query: 197 VAGTGGFGVSGATPSPAGG----MTAHAGHTPGPRLALDFQSPAP-----SPAPSLRPSA 349
G GG G G TPS GG G TP P +P P +P+P+
Sbjct: 292 GGGGGGGGGGGGTPSLGGGGGTPSIGGGGSTPAPTPGAGGGTPTPTGPTGTPSPTGPTGT 351
Query: 350 GQDAGASPAPAKSGAS 397
G A+P + +S
Sbjct: 352 GTSGSATPVSFPTASS 367
[21][TOP]
>UniRef100_Q5YNH6 Putative uncharacterized protein n=1 Tax=Nocardia farcinica
RepID=Q5YNH6_NOCFA
Length = 615
Score = 55.1 bits (131), Expect = 2e-06
Identities = 43/124 (34%), Positives = 52/124 (41%), Gaps = 3/124 (2%)
Frame = +2
Query: 38 TTSKHGGHA-SGRGGAGAGAIGAG--GTPLPGGFMPPLDRLDQNHYGGTPTPGAGAVAGT 208
T + GG A +G GG GA + A G GG P + + GG P PG A G
Sbjct: 447 TVAGTGGAAPAGSGGTGAANVPAADPGAATSGGSNPVPGQPGSSPTGGVPAPGTAAANGA 506
Query: 209 GGFGVSGATPSPAGGMTAHAGHTPGPRLALDFQSPAPSPAPSLRPSAGQDAGASPAPAKS 388
GV PA G TA PG +PAP+PAP+ P G +PAP
Sbjct: 507 PTAGV------PAPGDTA-VQPQPGQPAPAPAPAPAPAPAPAPSPGGGYTPPPAPAPPTG 559
Query: 389 GASG 400
G G
Sbjct: 560 GGVG 563
[22][TOP]
>UniRef100_C1MMP7 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MMP7_9CHLO
Length = 2567
Score = 55.1 bits (131), Expect = 2e-06
Identities = 31/75 (41%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Frame = +2
Query: 53 GGHASGRGGAGAGAIGAGGTPLPGG--------FMPPLDRLDQNHYGGTPTPGAGAVAGT 208
GG SG G G G GA GTP GG P + +G TPGAG G
Sbjct: 2468 GGGGSGAFGGGGGGSGAFGTPGGGGGGGFGGGSAASPFGAAPASPFGAAATPGAGGFGGV 2527
Query: 209 GGFGVSGATPSPAGG 253
GGFG S T P+GG
Sbjct: 2528 GGFGASPLTSQPSGG 2542
[23][TOP]
>UniRef100_B2VTH2 Putative uncharacterized protein n=1 Tax=Pyrenophora
tritici-repentis Pt-1C-BFP RepID=B2VTH2_PYRTR
Length = 601
Score = 54.7 bits (130), Expect = 3e-06
Identities = 43/129 (33%), Positives = 49/129 (37%), Gaps = 22/129 (17%)
Frame = +2
Query: 53 GGHASGRGGAG--------AGAIGAGGTPLP--------GGF-----MPPLDRLDQNHYG 169
GG+ S GG G AG G G TP P GG+ PP YG
Sbjct: 95 GGYGSSNGGYGNTPPPPPPAGNGGYGNTPPPPPPPPAGNGGYGNTPPPPPPPPAGNGGYG 154
Query: 170 GTPTPGAGAVAGTGGFG-VSGATPSPAGGMTAHAGHTPGPRLALDFQSPAPSPAPSLRPS 346
TP P AG GG+G P P G + PGP A Q PAP P P+ P
Sbjct: 155 NTPPPPPPPPAGNGGYGNTPPPPPPPPAGNGGYGSPAPGP--APGGQGPAPGPGPAPGPV 212
Query: 347 AGQDAGASP 373
G+ P
Sbjct: 213 PAPTQGSGP 221
[24][TOP]
>UniRef100_Q01851 POU domain, class 4, transcription factor 1 n=1 Tax=Homo sapiens
RepID=PO4F1_HUMAN
Length = 420
Score = 54.7 bits (130), Expect = 3e-06
Identities = 47/136 (34%), Positives = 53/136 (38%), Gaps = 24/136 (17%)
Frame = +2
Query: 65 SGRGGAGAGAIGAGGTPLPGGFMPPLDRLDQNHYGGTPTPGAGAVAGTGGFGVSGATPSP 244
+G GGAGA A G G PGG P GG PG G G GG G G P
Sbjct: 129 AGAGGAGAAAGGGGAHDGPGGGGGP---------GGGGGPGGGGPGGGGGGGPGGGGGGP 179
Query: 245 AGGM---TAH-------AGHTPGPRLALDFQSPAPSPAPSL--------------RPSAG 352
GG+ +AH GH P A P+ P P L +AG
Sbjct: 180 GGGLLGGSAHPHPHMHSLGHLSHPAAAAAMNMPSGLPHPGLVAAAAHHGAAAAAAAAAAG 239
Query: 353 QDAGASPAPAKSGASG 400
Q A AS A A GA+G
Sbjct: 240 QVAAASAAAAVVGAAG 255
[25][TOP]
>UniRef100_Q9NZ56 Formin-2 n=2 Tax=Homo sapiens RepID=FMN2_HUMAN
Length = 1722
Score = 54.3 bits (129), Expect = 4e-06
Identities = 35/109 (32%), Positives = 47/109 (43%)
Frame = -3
Query: 399 PLAPDFAGAGLAPASWPALGRSEGAGDGAGLWKSRAKRGPGVWPACAVMPPAGDGVAPDT 220
P P GAG+ P P L GAG+ G G+ P +P G P
Sbjct: 1152 PPPPPLPGAGIPPP--PPL-------PGAGIPPPPPLPGVGI-PPPPPLPGVGIPPPPPL 1201
Query: 219 PNPPVPATAPAPGVGVPP*WFWSSRSSGGMKPPGSGVPPAPIAPAPAPP 73
P +P P PG+G+PP + + PPG+G+PP P+ P PP
Sbjct: 1202 PGAGIPPPPPLPGMGIPP------APAPPLPPPGTGIPPPPLLPVSGPP 1244
Score = 53.1 bits (126), Expect = 9e-06
Identities = 41/124 (33%), Positives = 50/124 (40%), Gaps = 4/124 (3%)
Frame = -3
Query: 399 PLAPDFAGAGLAPASWPALGRSEGAGDGAGLWKSRAKRGPGVWPACAVMPPAGDGVAPDT 220
P P GAG+ P P L R G+ G G+ P +P AG P
Sbjct: 1130 PPPPPLPGAGIPPP--PPLPR-------VGIPPPPPLPGAGI-PPPPPLPGAGIPPPPPL 1179
Query: 219 PNPPVPATAPAPGVGVPP*WFWSSRSSGGMKPP----GSGVPPAPIAPAPAPPRPLAWPP 52
P +P P PGVG+PP G+ PP G G+PPAP P P P + PP
Sbjct: 1180 PGVGIPPPPPLPGVGIPPP---PPLPGAGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPP 1236
Query: 51 CFEV 40
V
Sbjct: 1237 LLPV 1240
[26][TOP]
>UniRef100_A9GHQ0 Cellulose synthase 1 operon protein C n=1 Tax=Sorangium cellulosum
'So ce 56' RepID=A9GHQ0_SORC5
Length = 2239
Score = 54.3 bits (129), Expect = 4e-06
Identities = 41/103 (39%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +2
Query: 83 GAGAIGAGGTPLPGGFMPPLDRLDQNHYGGTPTPGAGAVAGTGGFGVSGATPSPAGGMTA 262
GA A A TPLPGG P GG PTPGA GG GAT +P G+T
Sbjct: 378 GAHAPSATRTPLPGGAHAP-SATRTPLPGGAPTPGAPRAPLPGGAPTPGATRTPIPGVTP 436
Query: 263 HAGHTPGPRLALDFQSPAPSPAPSL----RPSAGQDAGASPAP 379
A H PG A +PA S A + PSA A AP
Sbjct: 437 SAAHAPGATPAPSTAAPAQSAAHAATVLHTPSAAHAATVLQAP 479
[27][TOP]
>UniRef100_Q08YB2 Response regulator n=1 Tax=Stigmatella aurantiaca DW4/3-1
RepID=Q08YB2_STIAU
Length = 413
Score = 54.3 bits (129), Expect = 4e-06
Identities = 45/119 (37%), Positives = 50/119 (42%), Gaps = 9/119 (7%)
Frame = -3
Query: 381 AGAGLAPASWPALGRSEGAGDGAGLWKSRAKRGPGVWPACAVMPPAGDGVAPDTPNPPVP 202
AG G AP P + AG GPG+ P PP G P P P P
Sbjct: 139 AGPGAAPQPPPP---AAAAGPRPPPGAVPRPPGPGMPPGPGAPPP---GARPPGPGAPPP 192
Query: 201 ATAPAPGVGVPP*WFWSSRSSG------GM-KPPGSGVPPAPIAPAPA--PPRPLAWPP 52
A PG G PP +R G GM +PPG G+PP P AP P PP P A PP
Sbjct: 193 GMARPPGPGAPPP---GARPPGPGAPPPGMARPPGPGMPPGPGAPPPGARPPGPGAPPP 248
Score = 53.9 bits (128), Expect = 5e-06
Identities = 33/74 (44%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Frame = -3
Query: 267 ACAVMPPAGDGVAPDTPNPPVPATAPAPGVGVPP*WFWSSRSSGGMKPPGSGVPPAPIAP 88
A VM PAG G AP P PP A P P G P +PPG G+PP P AP
Sbjct: 132 ATQVMRPAGPGAAPQPP-PPAAAAGPRPPPGAVP------------RPPGPGMPPGPGAP 178
Query: 87 APA--PPRPLAWPP 52
P PP P A PP
Sbjct: 179 PPGARPPGPGAPPP 192
[28][TOP]
>UniRef100_A6GEI9 Putative uncharacterized protein n=1 Tax=Plesiocystis pacifica
SIR-1 RepID=A6GEI9_9DELT
Length = 534
Score = 54.3 bits (129), Expect = 4e-06
Identities = 47/139 (33%), Positives = 54/139 (38%), Gaps = 13/139 (9%)
Frame = +2
Query: 5 ARAADNNTPMATTSKHGGHASGRGGAGAGAIGAGGTPLP--------GGFMPPLDRLDQN 160
A AA P S GG G GG+ G G G P P GG+ PP
Sbjct: 313 AEAAPPPAPAQPASTGGGGRRGGGGSRGGGGGGGSKPAPKSSPLNPFGGYTPP------- 365
Query: 161 HYGGTPTPG-----AGAVAGTGGFGVSGATPSPAGGMTAHAGHTPGPRLALDFQSPAPSP 325
G P P GA GT P+PAGG A G PG + PAP+P
Sbjct: 366 --GENPAPAPTNGQGGAQPGTQPGTQPAPAPAPAGG-GAQPGTQPGTQ-------PAPAP 415
Query: 326 APSLRPSAGQDAGASPAPA 382
AP+ + GA PAPA
Sbjct: 416 APA-------EGGAQPAPA 427
[29][TOP]
>UniRef100_C0UBN0 DNA polymerase III, subunit gamma/tau n=1 Tax=Geodermatophilus
obscurus DSM 43160 RepID=C0UBN0_9ACTO
Length = 583
Score = 53.9 bits (128), Expect = 5e-06
Identities = 36/94 (38%), Positives = 40/94 (42%), Gaps = 5/94 (5%)
Frame = -3
Query: 294 AKRGPGVWPACAVMP-----PAGDGVAPDTPNPPVPATAPAPGVGVPP*WFWSSRSSGGM 130
A + P V PA P P AP+ P PP P A A V P +
Sbjct: 439 AAQAPSV-PAAPAQPAPRPAPEPPRAAPERPEPPRPEPARAEPVAARPP---ADDGWPET 494
Query: 129 KPPGSGVPPAPIAPAPAPPRPLAWPPCFEVVAIG 28
PPGSG PP P APA PP P A PP A+G
Sbjct: 495 TPPGSGAPPRPPAPAATPPTPAATPPAAAPAAVG 528
[30][TOP]
>UniRef100_C1MZS3 Predicted protein n=1 Tax=Micromonas pusilla CCMP1545
RepID=C1MZS3_9CHLO
Length = 3282
Score = 53.9 bits (128), Expect = 5e-06
Identities = 26/60 (43%), Positives = 29/60 (48%)
Frame = -3
Query: 252 PPAGDGVAPDTPNPPVPATAPAPGVGVPP*WFWSSRSSGGMKPPGSGVPPAPIAPAPAPP 73
PP G APD P+PP P PAP PP PP G+PP P AP+P PP
Sbjct: 1043 PPPGRPPAPDAPSPPPPGRPPAPDAPSPPPPSPPPPRPDAPSPPPPGLPPRPAAPSPPPP 1102
Score = 53.5 bits (127), Expect = 7e-06
Identities = 28/62 (45%), Positives = 31/62 (50%)
Frame = -3
Query: 252 PPAGDGVAPDTPNPPVPATAPAPGVGVPP*WFWSSRSSGGMKPPGSGVPPAPIAPAPAPP 73
PP G APD P+PP P PAP PP + PP G PPAP AP+P PP
Sbjct: 1015 PPPGRPPAPDAPSPPPPGRPPAPDAPSPPPP-GRPPAPDAPSPPPPGRPPAPDAPSPPPP 1073
Query: 72 RP 67
P
Sbjct: 1074 SP 1075
Score = 53.5 bits (127), Expect = 7e-06
Identities = 33/87 (37%), Positives = 41/87 (47%), Gaps = 15/87 (17%)
Frame = -3
Query: 252 PPAGDGVAPDTPNPPVPATAPA-------PGVGVPP*WFWSSRSSGGMKPPGSGVPPAPI 94
PP G APD P+PP P+ P P G+PP PP G PPAP
Sbjct: 1057 PPPGRPPAPDAPSPPPPSPPPPRPDAPSPPPPGLPP-------RPAAPSPPPPGQPPAPA 1109
Query: 93 APAPAPP-RPLA-------WPPCFEVV 37
AP+P PP +PLA PPC +++
Sbjct: 1110 APSPPPPGQPLAPIRVVTPEPPCLQLL 1136
[31][TOP]
>UniRef100_Q9GUB5 Heavy-chain fibroin (Fragment) n=1 Tax=Galleria mellonella
RepID=Q9GUB5_GALME
Length = 1468
Score = 53.9 bits (128), Expect = 5e-06
Identities = 48/129 (37%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Frame = +2
Query: 17 DNNTPMATTSKHGGHASGRGGAGAGAIGA-GGTPLPGGFMPPLDRLDQNHYGGTPTPGAG 193
D+ + A+ + ASG GG G G +G GG L G + L GG T GA
Sbjct: 424 DDRSSAASAAAASSGASGLGGLGLGGLGPYGGIGLNG--VSSASALGAG-LGGVGTAGAS 480
Query: 194 AVAGTGGFGVSGATPSPAGGMTAHAGHTPGPRLALDFQSPAPSPAPSLRPSAGQDAGASP 373
+ G GG GVS P+ AG AG + G A S PAP + G A AS
Sbjct: 481 GLGGLGGAGVSAVGPAGAGLGGVGAGGSSGSS-AASAASARSGPAPVIVIEDGSSA-ASA 538
Query: 374 APAKSGASG 400
A A SGASG
Sbjct: 539 AAAGSGASG 547
[32][TOP]
>UniRef100_A8E493 HrpW n=1 Tax=Pseudomonas viridiflava RepID=A8E493_PSEVI
Length = 557
Score = 53.5 bits (127), Expect = 7e-06
Identities = 40/128 (31%), Positives = 49/128 (38%), Gaps = 5/128 (3%)
Frame = +2
Query: 29 PMATTSKHGGHASGRGGAGAGAIGAGGTPLPGGFMPPLDRLDQNHYGGTPTPGAGAVAGT 208
P K GG G G A G G GG P GG GG+P+ G G GT
Sbjct: 242 PSDGAGKGGGGGGGGGVAPTGTGGGGGAPSVGG--------GGGGGGGSPSVGGGGGGGT 293
Query: 209 GGFGVSGATPSPAGGMTAHAGHTPGPRLALDFQSPAP-----SPAPSLRPSAGQDAGASP 373
G G TPS GG G TP P +P P +P+P+ G A+P
Sbjct: 294 PSLGGGGGTPSIGGG-----GGTPAPTPGAGGGTPTPTGPTGTPSPTGPTGTGTSGSATP 348
Query: 374 APAKSGAS 397
+ +S
Sbjct: 349 VSFPTASS 356
[33][TOP]
>UniRef100_A8E443 HrpW n=1 Tax=Pseudomonas viridiflava RepID=A8E443_PSEVI
Length = 567
Score = 53.5 bits (127), Expect = 7e-06
Identities = 45/136 (33%), Positives = 52/136 (38%), Gaps = 13/136 (9%)
Frame = +2
Query: 23 NTPMATTSKHGGHASGRGGAGAGAIGAGGTPL--PGGFMPPLDRLDQNHYGGTPTPGAGA 196
N P K GG + G G G G GGTP GG L GGTP+ G G
Sbjct: 242 NQPSDAAGKGGGGGTPSLGGGGGGGGGGGTPSVGGGGGGGGTPSLGGGGGGGTPSVGGGG 301
Query: 197 VAGTGGFGV---------SGATPSPAGGMTAHAGHTPGPRLALDFQSPAPSPAPSLRPSA 349
G GG G+ G TPS GG G TP P P +P+P+
Sbjct: 302 GGGGGGGGIPSVGGGGGGGGGTPSIGGG-----GGTPAP------TGPTGTPSPTGPTGT 350
Query: 350 GQDAGASPA--PAKSG 391
G A+P P SG
Sbjct: 351 GTSGSATPVSFPTASG 366
[34][TOP]
>UniRef100_Q1B7N1 Putative uncharacterized protein n=1 Tax=Mycobacterium sp. MCS
RepID=Q1B7N1_MYCSS
Length = 771
Score = 53.1 bits (126), Expect = 9e-06
Identities = 47/125 (37%), Positives = 52/125 (41%), Gaps = 13/125 (10%)
Frame = -3
Query: 402 APLAPDFA----GAGLAPASWPALGRSEGAGDGAGLWKSRAKRGPGVWPACAVMPPAGDG 235
AP AP AG P + A+G G GAG A P PA V P AG
Sbjct: 52 APAAPPAGVVQPAAGAVPPAPSAVGAPAGGSGGAG-----APAAPPAPPAAVVEPAAG-A 105
Query: 234 VAPDTPNPPVPATAPAPGVG--VPP*WFWSSRSSGG-MKPPGSGVPPAPIA-PA-----P 82
P P PP PA GV PP + SGG + PPG PPA + PA P
Sbjct: 106 TPPAPPAPPAAVVEPASGVTPPAPPAPGGPAGGSGGAVTPPGPPAPPAAVVEPASGVTPP 165
Query: 81 APPRP 67
APP P
Sbjct: 166 APPAP 170
[35][TOP]
>UniRef100_A8ZKH4 Putative uncharacterized protein n=1 Tax=Acaryochloris marina
MBIC11017 RepID=A8ZKH4_ACAM1
Length = 509
Score = 53.1 bits (126), Expect = 9e-06
Identities = 42/108 (38%), Positives = 46/108 (42%)
Frame = -3
Query: 366 APASWPALGRSEGAGDGAGLWKSRAKRGPGVWPACAVMPPAGDGVAPDTPNPPVPATAPA 187
APA PA + S A P PA A P AP PP PA APA
Sbjct: 411 APAPAPAPAPAPAPAPAPAPIPSSAP-APAPAPAPAPAPAPAPAPAPVYVPPPAPAPAPA 469
Query: 186 PGVGVPP*WFWSSRSSGGMKPPGSGVPPAPIAPAPAPPRPLAWPPCFE 43
P V VPP + P + VPP APAPAPP P+A PP E
Sbjct: 470 P-VYVPP-------PAPAPAPAPAYVPPPAPAPAPAPPPPMAPPPTLE 509
[36][TOP]
>UniRef100_A8E4E5 HrpW n=1 Tax=Pseudomonas viridiflava RepID=A8E4E5_PSEVI
Length = 562
Score = 53.1 bits (126), Expect = 9e-06
Identities = 38/120 (31%), Positives = 47/120 (39%), Gaps = 5/120 (4%)
Frame = +2
Query: 53 GGHASGRGGAGAGAIGAGGTPLPGGFMPPLDRLDQNHYGGTPTPGAGAVAGTGGFGVSGA 232
GG G GG G G G T GG P GG+P+ G G GT G G
Sbjct: 247 GGGGGGGGGGGGGGGGVAPTGTGGGGGAPSVGGGGGGGGGSPSVGGGGGGGTPSLGGGGG 306
Query: 233 TPSPAGGMTAHAGHTPGPRLALDFQSPAP-----SPAPSLRPSAGQDAGASPAPAKSGAS 397
TPS GG G TP P +P P +P+P+ G A+P + +S
Sbjct: 307 TPSIGGG-----GGTPAPTPGAGGGTPTPTGPTGTPSPTGPTGTGTSGSATPVSFPTASS 361
[37][TOP]
>UniRef100_A8E431 HrpW n=1 Tax=Pseudomonas viridiflava RepID=A8E431_PSEVI
Length = 572
Score = 53.1 bits (126), Expect = 9e-06
Identities = 43/129 (33%), Positives = 48/129 (37%), Gaps = 7/129 (5%)
Frame = +2
Query: 26 TPMATTSKHGGHASGRGGAGAGAIGAGGTPLPGGFMPPLDRLDQNHYGGTPTPGAGAVAG 205
TP GG G G G G GGTP GG GGTP+ G G G
Sbjct: 261 TPSVGGGGGGGGGGGTPSVGGGGGGGGGTPSVGG--------GGGGGGGTPSVGGGGGGG 312
Query: 206 -----TGGFGVSGATPSPAGGMTAHAGHTPGPRLALDFQSPAPSPAPSLRPSAGQDAGAS 370
GG G G TPS GG G TP P P +P+P+ G A+
Sbjct: 313 GGTPSVGGGGGGGGTPSVGGG----GGGTPAP------TGPTGTPSPTGPTGTGTSGSAT 362
Query: 371 PA--PAKSG 391
P P SG
Sbjct: 363 PVSFPTASG 371