AV629727 ( LCL064f10_r )

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[1][TOP]
>UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
            RepID=A8IRZ2_CHLRE
          Length = 1789

 Score =  182 bits (461), Expect = 1e-44
 Identities = 88/88 (100%), Positives = 88/88 (100%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA 180
            VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA
Sbjct: 878  VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA 937

Query: 181  VEQAMRDEMAQIKEDLRVLREEVLTNGD 264
            VEQAMRDEMAQIKEDLRVLREEVLTNGD
Sbjct: 938  VEQAMRDEMAQIKEDLRVLREEVLTNGD 965

[2][TOP]
>UniRef100_Q8MX26 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cercomonas sp. ATCC
            50319 RepID=Q8MX26_9EUKA
          Length = 1014

 Score = 70.9 bits (172), Expect = 4e-11
 Identities = 34/88 (38%), Positives = 53/88 (60%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA 180
            +QF YGEDGMD V IE Q  + LK D A+  K Y++D +R    D++ AE  E L   P 
Sbjct: 798  IQFAYGEDGMDGVYIEKQKLDSLKMDNARFLKTYQLDVSRPEQLDFMDAEVREHLLRTPE 857

Query: 181  VEQAMRDEMAQIKEDLRVLREEVLTNGD 264
               A+  E+ Q+++D ++LR+++   G+
Sbjct: 858  AHDALETELKQLRDDRQLLRDKIQPTGE 885

[3][TOP]
>UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
            patens RepID=A9U396_PHYPA
          Length = 1742

 Score = 65.5 bits (158), Expect = 2e-09
 Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR-DMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMD+V IE Q  + LK   A+ ++ YR +  R D  PD++SAE  E ++T  
Sbjct: 885  IQFLYGEDGMDSVWIESQKLDSLKMKKAEFNRVYRFEIDRDDWAPDYMSAEAAEDIKTIQ 944

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
             +      E+++++ D R +  E+   G+
Sbjct: 945  EIRNVFDAEVSKLEADRRQMGLEIAPTGE 973

[4][TOP]
>UniRef100_C9SR21 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Verticillium
            albo-atrum VaMs.102 RepID=C9SR21_9PEZI
          Length = 1756

 Score = 63.2 bits (152), Expect = 9e-09
 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEY-EALRTDP 177
            +QFLYGEDG+DA+ IE Q  ++L     K D  Y++D      P+ L   EY   +  DP
Sbjct: 877  IQFLYGEDGLDAIYIEKQRMDFLNMSNKKFDDRYKLDVMDANKPEELDWLEYGNEIAGDP 936

Query: 178  AVEQAMRDEMAQIKEDLRVLRE 243
            A +Q + +E   + ED RV+RE
Sbjct: 937  ASQQLLDEEYEALAEDRRVVRE 958

[5][TOP]
>UniRef100_Q71ET5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nymphaea odorata
            RepID=Q71ET5_NYMOD
          Length = 1013

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK   ++ DK ++ +    +  P +L  +  E L+T  
Sbjct: 804  IQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKFEFDDENWDPSYLQPDFVEDLKTIK 863

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
             ++     E+ +++ D R L  E+ T GD
Sbjct: 864  ELQDVFHAEVQKLETDRRQLATEIATTGD 892

[6][TOP]
>UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351
          Length = 2085

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDA+ IE Q  + LK   A+ D  +R +    +  P++LS +  E L+T  
Sbjct: 883  IQFLYGEDGMDAIWIESQKLDSLKMKKAEFDNVFRYELDDENWKPNYLSTQHAEDLKTIS 942

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
             +      E+ +++ D   L  E+ T GD
Sbjct: 943  EIRNVFEAEVQKLEADRFQLGTEIATTGD 971

[7][TOP]
>UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
            RepID=Q5WMZ9_ORYSJ
          Length = 1741

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDA+ IE Q  + LK   A+ D  +R +    +  P++LS +  E L+T  
Sbjct: 830  IQFLYGEDGMDAIWIESQKLDSLKMKKAEFDNVFRYELDDENWKPNYLSTQHAEDLKTIS 889

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
             +      E+ +++ D   L  E+ T GD
Sbjct: 890  EIRNVFEAEVQKLEADRFQLGTEIATTGD 918

[8][TOP]
>UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
            RepID=Q0DKN9_ORYSJ
          Length = 1834

 Score = 61.2 bits (147), Expect = 3e-08
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDA+ IE Q  + LK   A+ D  +R +    +  P++LS +  E L+T  
Sbjct: 883  IQFLYGEDGMDAIWIESQKLDSLKMKKAEFDNVFRYELDDENWKPNYLSTQHAEDLKTIS 942

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
             +      E+ +++ D   L  E+ T GD
Sbjct: 943  EIRNVFEAEVQKLEADRFQLGTEIATTGD 971

[9][TOP]
>UniRef100_A4RMP1 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
            RepID=A4RMP1_MAGGR
          Length = 1757

 Score = 60.5 bits (145), Expect = 6e-08
 Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEY-EALRTDP 177
            +QF+YGEDG+D + IE Q  ++L     K D  Y++D      P  L+A EY   +  DP
Sbjct: 875  IQFIYGEDGLDGMAIEKQKMDHLNISNGKFDGMYKLDLMTATRPRELNALEYGNEIFGDP 934

Query: 178  AVEQAMRDEMAQIKEDLRVLRE 243
            AV+Q + +E   IK D +++RE
Sbjct: 935  AVQQLLDEEYDAIKADRQLIRE 956

[10][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
            RepID=Q9AXN0_9RHOD
          Length = 1746

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT------TRDMPPDWLSAEEYEA 162
            VQFLYGEDGMD   +E Q    L  + AKL++ + +D         +    +L+ E  + 
Sbjct: 852  VQFLYGEDGMDGAMVEDQNLRTLSMNDAKLEQTFHLDPFDLDFGIGENRRSYLAQEVIDD 911

Query: 163  LRTDPAVEQAMRDEMAQIKEDLRVLREEVL 252
            +R DP + +A+ DE AQIK D   L+ E++
Sbjct: 912  VRNDPQLIKALEDEFAQIKLDRDRLQREII 941

[11][TOP]
>UniRef100_Q2PYS6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Polychytrium
            aggregatum RepID=Q2PYS6_9FUNG
          Length = 1016

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTT---RDMPPDWLSAEEYEALRT 171
            +QF YGEDGMD  ++E Q  E L    AK +KAYR+D T     + P  L     E L +
Sbjct: 805  IQFCYGEDGMDGAKVERQNLESLAMSDAKFEKAYRVDLTGGQYGLKPGVLDFRTQENLLS 864

Query: 172  DPAVEQAMRDEMAQIKEDLRVLREEVLTNG 261
            D   +  +  E  Q+++D   LR  +  +G
Sbjct: 865  DGLTQNRLDQEFEQLRKDRETLRWTIFKDG 894

[12][TOP]
>UniRef100_Q2PYR5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mortierella
            verticillata RepID=Q2PYR5_9FUNG
          Length = 1016

 Score = 59.7 bits (143), Expect = 1e-07
 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTT------RDMPPDW------LS 144
            +QF YGEDGMDA  +E Q  + +K   A  +K YRID T      ++   D+        
Sbjct: 796  IQFCYGEDGMDACHVEKQPLDTVKMSNAAFEKKYRIDLTDKSKSFKNGTLDYNVFKQIAE 855

Query: 145  AEEYEALRTDPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
            A+E  A R +P ++  +  E  Q+ ED  +LR  + T GD
Sbjct: 856  ADEEAAKRGEPDMQTLLEQEFKQLDEDRHLLRNYIFTEGD 895

[13][TOP]
>UniRef100_Q1ACT9 RNA polymerase II largest subunit (Fragment) n=1 Tax=Iresine
           herbstii RepID=Q1ACT9_IREHE
          Length = 240

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK    + DK YR +   D   PD++  E  + L+T  
Sbjct: 34  IQFLYGEDGMDAVWIESQKLDSLKMKKLEFDKTYRYEFDADNWEPDYMLKEHVDDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  ++ T GD
Sbjct: 94  EFRNVFDAEVQKLEVDRCQLATDIATTGD 122

[14][TOP]
>UniRef100_O04144 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spirogyra sp.
           RepID=O04144_9VIRI
          Length = 613

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR-DMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q    +K + +  D  YR +  + D  PD++  +  +  +   
Sbjct: 392 IQFLYGEDGMDAVWIESQSLPSMKMNKSTFDATYRYEIDQEDWSPDYMDPQFAKDAKIVA 451

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
              Q M  E+ Q+++D R L  E+   GD
Sbjct: 452 EFRQVMDAEVLQLEQDRRTLGLEIAPTGD 480

[15][TOP]
>UniRef100_Q1ACS9 RNA polymerase II largest subunit (Fragment) n=1 Tax=Ruschia herrei
           RepID=Q1ACS9_9CARY
          Length = 240

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK   ++ DK +R +    +  PD++  E  + L+T  
Sbjct: 34  IQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKTFRYEFDAENWEPDYMLKEHVDDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFRNVFDAEVQKLEADRFQLGTEIATTGD 122

[16][TOP]
>UniRef100_Q71ET3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Psilotum nudum
            RepID=Q71ET3_PSINU
          Length = 1013

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            ++FLYGEDGMDAV IE Q  + +K    + D+ Y  +  + +  PD++ AE  E L+T  
Sbjct: 804  IEFLYGEDGMDAVWIESQKLDSMKMKTKEFDRMYMFEIDSENWNPDYMLAEHVEDLKTIQ 863

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                    E+ +++ D R L  E+  +GD
Sbjct: 864  EFRNVFDAEVQKLEADRRQLCTEIAPSGD 892

[17][TOP]
>UniRef100_Q2TUN8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Taxus canadensis
            RepID=Q2TUN8_TAXCA
          Length = 1013

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK    + +  YR +  ++   P ++  E  + L+T  
Sbjct: 804  IQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDQENWNPSYMLPEHVDDLKTIR 863

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
              +     E+ +++ D R L  E+ T GD
Sbjct: 864  EFQNVFDAELQKLESDRRQLGTEIATTGD 892

[18][TOP]
>UniRef100_Q1ACU5 RNA polymerase II largest subunit (Fragment) n=1 Tax=Dionaea
           muscipula RepID=Q1ACU5_DIOMU
          Length = 240

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK   ++  KAYR +    +  P ++  +  E L++ P
Sbjct: 34  IQFLYGEDGMDAVWIESQKLDSLKMKKSEFLKAYRFEYDDPNWNPKYIRPDYIEDLKSIP 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+++++ D  +L  ++ T GD
Sbjct: 94  EFHDVFEAEISKLESDRLLLATQIATTGD 122

[19][TOP]
>UniRef100_B8BQ02 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335
            RepID=B8BQ02_THAPS
          Length = 1627

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTT------RDMPPDWLSAEEYEA 162
            VQFLYGEDGMDAV IE Q F+ L  +  + D+ Y + +        D    +L AE  E 
Sbjct: 872  VQFLYGEDGMDAVWIERQSFDSLTLNKREFDERYLLHSDDPDFGYDDQNIPFLEAEVIED 931

Query: 163  LRTDPAVEQAMRDEMAQIKEDLRVLR 240
             R +P V+Q +  EM  +KED  +LR
Sbjct: 932  CRHNPEVQQMLDREMEVLKEDQAMLR 957

[20][TOP]
>UniRef100_B7SNX5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Saruma henryi
            RepID=B7SNX5_SARHE
          Length = 1009

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK   A+ DK +R +    +  P ++  E  E L+T  
Sbjct: 800  IQFLYGEDGMDAVWIESQKLDSLKMKKAEFDKVFRYEFDDANWNPSYMLPEHVEDLKTIR 859

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                    E+ +++ D   L  E+ T GD
Sbjct: 860  EFRSVFDAEVQKLEADRYQLGTEITTTGD 888

[21][TOP]
>UniRef100_B7SNX2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Papaver orientale
            RepID=B7SNX2_PAPOR
          Length = 1010

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK    + DK YR +   D   P+++ ++  E L+   
Sbjct: 801  IQFLYGEDGMDAVWIESQKLDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIR 860

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                    E+ ++ +D   L  E+ T GD
Sbjct: 861  EFRHVFDAEVKKLADDRLQLGTEITTTGD 889

[22][TOP]
>UniRef100_Q2PYP9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix sp.
           GE13 RepID=Q2PYP9_9FUNG
          Length = 813

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR---DMPPDWLSAEEYEAL-R 168
           +QF YGEDGMD   +E Q  E ++   AK +K Y+ID T     + P  L     E L +
Sbjct: 601 IQFCYGEDGMDGTSVEKQQLESIRMSDAKFEKFYKIDLTDKDFGLKPKTLQFSILEDLAQ 660

Query: 169 TDPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
               V++ + +E   ++ED ++ RE +  NGD
Sbjct: 661 QSNVVQEKLDEEYKSLQEDRKLFREFIFKNGD 692

[23][TOP]
>UniRef100_A1YIC6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix
            frontalis RepID=A1YIC6_NEOFR
          Length = 1004

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR---DMPPDWLSAEEYEAL-R 168
            +QF YGEDGMD   +E Q  E ++   AK +K Y+ID T     + P  L     E L +
Sbjct: 787  IQFCYGEDGMDGTSVEKQQLESIRMSDAKFEKFYKIDLTDKDFGLKPKTLQFSILEDLAQ 846

Query: 169  TDPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                V++ + +E   ++ED ++ RE +  NGD
Sbjct: 847  QSNVVQEKLDEEYKSLQEDRKLFREFIFKNGD 878

[24][TOP]
>UniRef100_Q71ET4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Amborella trichopoda
            RepID=Q71ET4_AMBTC
          Length = 1013

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK   A+ +  Y+ +  ++   P ++  E  E L+T  
Sbjct: 804  IQFLYGEDGMDAVWIESQKLDSLKMKRAEFENVYKYEIDQENWSPSYMLPEHVEDLKTIR 863

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
              +     E+ +++ D   L  E+ T GD
Sbjct: 864  EFQNVFDAEVQKLEADRHQLGTEITTTGD 892

[25][TOP]
>UniRef100_Q1ACT4 RNA polymerase II largest subunit (Fragment) n=1 Tax=Platanus
           orientalis RepID=Q1ACT4_PLAOI
          Length = 240

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK   ++ DK +R +    +  P ++  E  E L+T  
Sbjct: 34  IQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFRYEIDNENWNPSYMLPEHVEDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
             +     E+ +++ D   L  E+ T GD
Sbjct: 94  EFQNVFDAEVRKLEADRYQLGTEITTMGD 122

[26][TOP]
>UniRef100_B7SNW8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drimys winteri
            RepID=B7SNW8_DRIWI
          Length = 1010

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMD+V IE Q  + LK   A+ D  +R +   D   P ++  E  E L+T  
Sbjct: 801  IQFLYGEDGMDSVWIESQKLDSLKMKKAEFDNVFRYEIDNDNWNPSYMVPEHVEDLKTIR 860

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                    E+ +++ D   L  E+ T GD
Sbjct: 861  EFRNVFDAEVQKLEADRYQLGSEIATTGD 889

[27][TOP]
>UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
            RepID=Q6CBQ3_YARLI
          Length = 1750

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 30/88 (34%), Positives = 48/88 (54%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA 180
            +QF+YGEDG+D  ++E Q  + +       ++ Y+ID         L+ E    +  D  
Sbjct: 869  IQFVYGEDGLDGAQVEKQTVDTIPGSDESFERRYKIDLMNPKTKP-LNIESGNDIVGDVE 927

Query: 181  VEQAMRDEMAQIKEDLRVLREEVLTNGD 264
            V++ + +E  Q+  D R+LREEV TNGD
Sbjct: 928  VQRVLDEEYNQLLTDRRLLREEVFTNGD 955

[28][TOP]
>UniRef100_Q2PYR1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spiromyces aspiralis
            RepID=Q2PYR1_9FUNG
          Length = 1022

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRI---DTTRDMPPDWLSAEEYEALRT 171
            VQF YGEDGMD+  +EGQ    +++   K +  Y +   D+ +  P   L     + +  
Sbjct: 811  VQFTYGEDGMDSTHLEGQSVNLVRYSDKKFESTYFVDVMDSEKSFPSGTLEFSVLKNVEG 870

Query: 172  DPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
            +  V++ + DE  Q+KED  +LR+ +  +G+
Sbjct: 871  NDEVQRVLDDEYEQLKEDRHILRKFIARDGE 901

[29][TOP]
>UniRef100_Q1L5Z5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhododendron
           macrophyllum RepID=Q1L5Z5_RHOMC
          Length = 589

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK   ++ DK +R +    +  P ++ AE  E L+T  
Sbjct: 391 IQFLYGEDGMDAVWIETQRLDSLKMKKSEFDKKFRYEIDDGNWNPSYMLAEHVEDLKTIR 450

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 451 EFRNVFDAEVQKLEADRLQLGTEIATTGD 479

[30][TOP]
>UniRef100_Q1ACU8 RNA polymerase II largest subunit (Fragment) n=1 Tax=Buxus
           sempervirens RepID=Q1ACU8_BUXSE
          Length = 240

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK   A  DK +R +    +  P ++  E  E L+T  
Sbjct: 34  IQFLYGEDGMDAVWIEDQKLDSLKMKKADFDKVFRYEIDDENWSPSYMLPEHVEDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFRNVFDAEVQKLQADRFQLGTEIATTGD 122

[31][TOP]
>UniRef100_Q1ACT5 RNA polymerase II largest subunit (Fragment) n=1 Tax=Platanus
           orientalis RepID=Q1ACT5_PLAOI
          Length = 240

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK   ++ DK +R +    +  P ++  E  E L+T  
Sbjct: 34  IQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFRYEIDNENWNPSYMLPEHVEDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFRNVFDAEVQKLEADRFQLGTEIATTGD 122

[32][TOP]
>UniRef100_Q1ACT2 RNA polymerase II largest subunit (Fragment) n=1 Tax=Nepenthes
           ampullaria RepID=Q1ACT2_9CARY
          Length = 240

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMD+V IE Q  E LK   ++ D  YR +    D  P+++  +  E L+T  
Sbjct: 34  IQFLYGEDGMDSVWIESQKLESLKIKKSEFDMVYRYELNDEDWNPNYMLPDHVEDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFRNVFDAEVQKLEADRFQLATEIATTGD 122

[33][TOP]
>UniRef100_Q1ACS3 RNA polymerase II largest subunit (Fragment) n=1 Tax=Vitis
           piasezkii RepID=Q1ACS3_9MAGN
          Length = 240

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  E LK    + D+A+R +    +  P+++  E  E L+T  
Sbjct: 34  IQFLYGEDGMDAVWIESQKLESLKMKGMEFDRAFRYEIDDENWNPNYMFREHAEDLKTIQ 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ + GD
Sbjct: 94  EFRNVFDAEVQKLEADRNQLGTEIASTGD 122

[34][TOP]
>UniRef100_A7R1R2 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
           RepID=A7R1R2_VITVI
          Length = 429

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  E LK    + D+A+R +    +  P+++  E  E L+T  
Sbjct: 139 IQFLYGEDGMDAVWIESQKLESLKMKGMEFDRAFRYEIDDENWNPNYMFREHAEDLKTIQ 198

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ + GD
Sbjct: 199 EFRNVFDAEVQKLEADRNQLGTEIASTGD 227

[35][TOP]
>UniRef100_Q7SDN0 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
            RepID=Q7SDN0_NEUCR
          Length = 1752

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-TRDMPPDWLSAEEY-EALRTD 174
            +QF+YGEDG+D + IE Q  ++        DK YR+D    ++    L A EY + L +D
Sbjct: 878  IQFVYGEDGLDGIAIENQPVDHFTISNKAFDKRYRLDVMDEEVSSGELEALEYGKELASD 937

Query: 175  PAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
            P V++ +  E  Q+  D  +LRE   T G+
Sbjct: 938  PTVQELLDQEYEQLSVDRHMLREIQRTKGN 967

[36][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
            discoideum RepID=RPB1_DICDI
          Length = 1727

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR-DMPPDWLSAEEYEALRTDP 177
            +QF YGEDG+D   +E Q  + L+ D  +L++ YR    + D    W+     E +R D 
Sbjct: 873  IQFAYGEDGIDGCFVENQSIDSLRKDNTELERMYRHQVDKPDYGDGWMDPLVIEHVRNDS 932

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                 +  E  +IK D  +LR E++ +G+
Sbjct: 933  LTRDTLEKEFERIKSDRSLLRNEIIPSGE 961

[37][TOP]
>UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis
            thaliana RepID=RPB1_ARATH
          Length = 1840

 Score = 57.4 bits (137), Expect = 5e-07
 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK   ++ D+ ++ +    +  P +LS E  E L+   
Sbjct: 884  IQFLYGEDGMDAVWIESQKLDSLKMKKSEFDRTFKYEIDDENWNPTYLSDEHLEDLKGIR 943

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
             +      E ++++ D   L  E+ TNGD
Sbjct: 944  ELRDVFDAEYSKLETDRFQLGTEIATNGD 972

[38][TOP]
>UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
           RepID=Q99368_SOYBN
          Length = 977

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDA+ IE Q  + LK    + D+ +R +    +  P+++  E  E L+T  
Sbjct: 74  IQFLYGEDGMDAIWIETQKLDTLKMKKTEFDRVFRYEFDEENWKPNYMLQEPVEDLKTIR 133

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ +NGD
Sbjct: 134 EFRNVFEAEVQKLEADRHQLAIEIASNGD 162

[39][TOP]
>UniRef100_Q1ACV0 RNA polymerase II largest subunit (Fragment) n=1 Tax=Berberidopsis
           beckleri RepID=Q1ACV0_9MAGN
          Length = 240

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-TRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK   +  ++ +R +    +  P ++  E  E L+T P
Sbjct: 34  IQFLYGEDGMDAVWIEFQKLDSLKMKKSDFBRVFRYEIGDENWNPTFMLPEHVEGLKTIP 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFGNVFEAEIRKLEADRYQLGTEIATTGD 122

[40][TOP]
>UniRef100_Q1ACU4 RNA polymerase II largest subunit (Fragment) n=1 Tax=Gunnera
           chilensis RepID=Q1ACU4_GUNCH
          Length = 240

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK   A+ DK ++ +    +  P ++  E  E L+T  
Sbjct: 34  IQFLYGEDGMDAVWIESQKLDSLKMKKAEFDKVFKYEIDDENWNPSYMLPEHVEDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFRNVFDAEVQKLEADRFQLGTEIATTGD 122

[41][TOP]
>UniRef100_Q1ACT1 RNA polymerase II largest subunit (Fragment) n=1 Tax=Quercus
           coccinea RepID=Q1ACT1_9ROSI
          Length = 240

 Score = 57.0 bits (136), Expect = 6e-07
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMD+V IE Q  E LK   ++ +K +R +       PD++  E  E L+T  
Sbjct: 34  IQFLYGEDGMDSVWIESQKLESLKMKKSEFNKTFRYEFDDEHWNPDYMMQEHIEDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFRNVFDAEVQKLEADRFQLGTEIATTGD 122

[42][TOP]
>UniRef100_Q1ACV3 RNA polymerase II largest subunit (Fragment) n=1 Tax=Acer palmatum
           RepID=Q1ACV3_ACEPM
          Length = 240

 Score = 56.6 bits (135), Expect = 8e-07
 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q+ + LK   +  +K +R +  +D   P+++  E  + L+T  
Sbjct: 34  IQFLYGEDGMDAVWIETQILDSLKIKKSDFNKTFRFEMDQDNWNPNYMLQEFIDBLKTIK 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
            +      E+ +++ D   L  E+ T+GD
Sbjct: 94  ELRDVFDAEVQKLEADRYQLATEIATSGD 122

[43][TOP]
>UniRef100_Q71EU1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Zamia muricata
            RepID=Q71EU1_9SPER
          Length = 1013

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK    + +  YR +    +  P ++  E  E L+T  
Sbjct: 804  IQFLYGEDGMDAVWIESQKLDSLKMKRPEFENVYRYEIDNENWNPSYMLPEHVEDLKTIR 863

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
              +     E+ +++ D R L  E+  +GD
Sbjct: 864  EFQNVFDAEVQKLEADRRQLGTEIAPSGD 892

[44][TOP]
>UniRef100_Q2TUN9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Thuja occidentalis
            RepID=Q2TUN9_THUOC
          Length = 1013

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK    + +  YR +  ++   P ++  E  + L+T  
Sbjct: 804  IQFLYGEDGMDAVWIESQKLDSLKMKRKEFENVYRYEIDQENWNPSYMLPEHVDDLKTIR 863

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
              +     E+ +++ D R L  E+  +GD
Sbjct: 864  EFQNVFDAELQKLESDRRQLGTEIAPSGD 892

[45][TOP]
>UniRef100_Q1ACU7 RNA polymerase II largest subunit (Fragment) n=1 Tax=Cissus
           tuberosa RepID=Q1ACU7_9MAGN
          Length = 240

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK   A+ D+ ++ +    +  P ++  E  E L+T  
Sbjct: 34  IQFLYGEDGMDAVWIESQKLDSLKMKKAEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFRNVFDAEVQKLEADRYQLGTEIATTGD 122

[46][TOP]
>UniRef100_Q1ACT3 RNA polymerase II largest subunit (Fragment) n=1 Tax=Nelumbo
           nucifera RepID=Q1ACT3_NELNU
          Length = 240

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK   ++ DK +R +    +  P ++  E  E L+T  
Sbjct: 34  IQFLYGEDGMDAVWIETQKLDSLKMRKSEFDKVFRYEIDDENWNPSYMLPEHVEDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFRNVFDAEVQKLEADRYQLGTEIATTGD 122

[47][TOP]
>UniRef100_B7SNW5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Asparagus officinalis
            RepID=B7SNW5_ASPOF
          Length = 1009

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK    + +  YR +       P ++  E  E L+T P
Sbjct: 800  IQFLYGEDGMDAVWIESQKLDSLKMKKKEFNNVYRYEIDDNQWDPSYMLPEHVEDLKTIP 859

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                    E+ +++ D   L  ++ T GD
Sbjct: 860  EFRNVFDAEVQKLEADRFQLGTDIATTGD 888

[48][TOP]
>UniRef100_Q71EU0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cycas revoluta
            RepID=Q71EU0_CYCRE
          Length = 1013

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK   ++ +  YR +    +  P ++  E  E L+T  
Sbjct: 804  IQFLYGEDGMDAVWIESQKLDSLKMKRSEFENVYRYEIDNENWNPSYMLPEHVEDLKTIR 863

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
              +     ++ +++ D R L  E+  +GD
Sbjct: 864  EFQNVFDAQVQKLEADRRQLGTEIAPSGD 892

[49][TOP]
>UniRef100_Q71ET9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra
            RepID=Q71ET9_9CONI
          Length = 1013

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK    + +  Y+ +  ++   P ++  E  E L+T  
Sbjct: 804  IQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYKYELDQENWNPSYMLPEHVEDLKTIR 863

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
              +     E+ +++ D R L  E+  +GD
Sbjct: 864  EFQNVFDAEVQKLESDRRQLGMEIAPSGD 892

[50][TOP]
>UniRef100_Q1ACS5 RNA polymerase II largest subunit (Fragment) n=1 Tax=Tetracentron
           sinense RepID=Q1ACS5_9MAGN
          Length = 240

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK   ++ DK +R +    +  P ++  E  E L+T  
Sbjct: 34  IQFLYGEDGMDAVWIETQKLDSLKMKKSEFDKVFRYEIDNENWNPSYMLPEHVEDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ ++  D   L  E+ T GD
Sbjct: 94  EFRNVFDAEVQKLAADRCQLGTEIATTGD 122

[51][TOP]
>UniRef100_Q2PYS1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum
            RepID=Q2PYS1_9FUNG
          Length = 1015

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT---TRDMPPDWLSAEEYEALRT 171
            +QF YGEDGMD   +E Q  + ++    K +K+Y++D     +   P  L     + +  
Sbjct: 804  IQFCYGEDGMDGCFVEKQTLDSIRMSNEKFEKSYKVDVMDKEKGFKPGVLEFNILKDVEG 863

Query: 172  DPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
            + + +  + +E  Q+ +D RVLRE + T+GD
Sbjct: 864  NDSTQMMLDEEYRQLCDDRRVLREFIFTSGD 894

[52][TOP]
>UniRef100_A7J5B1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Teloschistes exilis
            RepID=A7J5B1_9LECA
          Length = 1003

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYE---ALRT 171
            VQF+YGEDG+D   IE Q  + +    AK +K +RID   D P   +SAE  E    +  
Sbjct: 785  VQFVYGEDGLDGAHIEPQRLDIIVCSDAKFEKDFRIDLMDDNPRTTVSAEFLEQATEIAA 844

Query: 172  DPAVEQAMRDEMAQIKEDLRVLRE 243
            D  V+Q + +E  Q+K     LR+
Sbjct: 845  DGKVQQVLDEEYEQLKAAREFLRK 868

[53][TOP]
>UniRef100_A7J588 DNA-directed RNA polymerase (Fragment) n=1 Tax=Heterodermia vulgaris
            RepID=A7J588_9LECA
          Length = 996

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYE---ALRT 171
            VQF+YGEDG+D   IE Q  + +    AK +K +RID   D P   +SAE  E    +  
Sbjct: 778  VQFVYGEDGLDGAHIEPQRLDIIVCSDAKFEKDFRIDLMDDNPRTTVSAEFLEQATEIAA 837

Query: 172  DPAVEQAMRDEMAQIKEDLRVLRE 243
            D  V+Q + +E  Q+K     LR+
Sbjct: 838  DGKVQQVLDEEYEQLKAAREFLRK 861

[54][TOP]
>UniRef100_Q1ACU9 RNA polymerase II largest subunit (Fragment) n=1 Tax=Berberidopsis
           corallina RepID=Q1ACU9_9MAGN
          Length = 240

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-TRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK   +  D+ +R +    +  P ++  E  E L+T  
Sbjct: 34  IQFLYGEDGMDAVGIEFQKLDSLKMKKSDFDRVFRYEIGDENWNPTYMLPEHVEGLKTIL 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFSNVFEAEIRKLEADRYQLGTEIATTGD 122

[55][TOP]
>UniRef100_B7SNX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pisum sativum
            RepID=B7SNX4_PEA
          Length = 1010

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK      D+A+R +    +  P ++  E  E L+T  
Sbjct: 801  IQFLYGEDGMDAVWIETQKLDSLKMKKTDFDRAFRYEFDDENWKPTYMLEEPVEDLKTIR 860

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                    E+ ++  D   L  E+ T GD
Sbjct: 861  EFRNVFEAEVQKLDADRFQLATEIATTGD 889

[56][TOP]
>UniRef100_B9PMD7 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii
            RepID=B9PMD7_TOXGO
          Length = 1892

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
            +QFLYGEDGM    +E Q  E +  D  KL + YR D  ++     WLS E    + TD 
Sbjct: 890  LQFLYGEDGMSGEFVEDQTVELMTLDNEKLKRLYRHDVDQESYGKGWLSDELRNEILTDY 949

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
             ++Q + +E   I+ED   L   +  +G+
Sbjct: 950  ELQQPLEEEFEAIREDKNRLCRHIFKDGE 978

[57][TOP]
>UniRef100_B6KEC6 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
            RepID=B6KEC6_TOXGO
          Length = 1892

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
            +QFLYGEDGM    +E Q  E +  D  KL + YR D  ++     WLS E    + TD 
Sbjct: 890  LQFLYGEDGMSGEFVEDQTVELMTLDNEKLKRLYRHDVDQESYGKGWLSDELRNEILTDY 949

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
             ++Q + +E   I+ED   L   +  +G+
Sbjct: 950  ELQQPLEEEFEAIREDKNRLCRHIFKDGE 978

[58][TOP]
>UniRef100_B2AA31 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
            RepID=B2AA31_PODAN
          Length = 1748

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEY-EALRTD 174
            +QF+YGEDG+D + IE Q  +++  + AK DK +R+D   +      L A EY   + +D
Sbjct: 877  IQFVYGEDGLDGIAIEKQKVDHMNLNNAKFDKRFRLDVMDETSSAAALDALEYGREMVSD 936

Query: 175  PAVEQAMRDEMAQIKEDLRVLRE 243
            PAV+  + +E  Q+  D + +RE
Sbjct: 937  PAVQSLLDEEYEQLLADRKQVRE 959

[59][TOP]
>UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1
            Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO
          Length = 1752

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 29/88 (32%), Positives = 47/88 (53%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA 180
            +QF YGEDG+DA  +E Q+F+ L+    + +K YRID   D     LS     ++  D +
Sbjct: 870  IQFAYGEDGLDATLVEYQVFDSLRLSTKQFEKKYRIDLMEDRS---LSLYMENSIENDSS 926

Query: 181  VEQAMRDEMAQIKEDLRVLREEVLTNGD 264
            V+  + +E  Q+  D  +L + +   GD
Sbjct: 927  VQDLLDEEYTQLVADRELLCKFIFPKGD 954

[60][TOP]
>UniRef100_Q71ET8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Welwitschia mirabilis
            RepID=Q71ET8_WELMI
          Length = 1013

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
 Frame = +1

Query: 4    QFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDPA 180
            QFLYGEDGMDAV IE Q  + LK    + D  Y+ +  ++   P ++  E  E L+T   
Sbjct: 805  QFLYGEDGMDAVWIESQKLDSLKMKKREFDDVYKYELDQENWNPGYMLPEHIEDLKTIRE 864

Query: 181  VEQAMRDEMAQIKEDLRVLREEVLTNGD 264
             +     E+  ++ D R L  E+  +GD
Sbjct: 865  FQNVCDAEVQHLENDRRQLGTEIAPSGD 892

[61][TOP]
>UniRef100_Q71ET7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Zea mays
            RepID=Q71ET7_MAIZE
          Length = 1009

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK    + D  +R +    +  P+++  E  + L+T  
Sbjct: 800  IQFLYGEDGMDAVWIESQKLDSLKMKKPEFDNVFRYELDDENWRPNYMLPEHVDDLKTIR 859

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                    E+ +++ D   L  E+ T GD
Sbjct: 860  EFRNVFEAEVQKLEADRYQLGSEITTTGD 888

[62][TOP]
>UniRef100_Q2TUN7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Podocarpus
            macrophyllus RepID=Q2TUN7_9CONI
          Length = 1013

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK    + +  Y+ +  ++   P ++  E  E L+T  
Sbjct: 804  IQFLYGEDGMDAVWIESQKLDSLKMKRKEFENVYKYEVDQENWNPIYMLPEHVEDLKTIR 863

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
              +     E+ +++ D R L  E+  +GD
Sbjct: 864  EFQNVFDAEVQKLESDRRQLGTEIAPSGD 892

[63][TOP]
>UniRef100_Q1ACV2 RNA polymerase II largest subunit (Fragment) n=1 Tax=Aextoxicon
           punctatum RepID=Q1ACV2_9MAGN
          Length = 240

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK   +  D+ +R +    +  P ++  E  E L+T  
Sbjct: 34  IQFLYGEDGMDAVWIESQKLDSLKMKKSDFDRVFRYEIDDENWNPSYMLPEHVEDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFRNVFDAEVQKLEADRFQLGTEIATTGD 122

[64][TOP]
>UniRef100_Q1ACU1 RNA polymerase II largest subunit (Fragment) n=1 Tax=Hibbertia
           scandens RepID=Q1ACU1_9MAGN
          Length = 240

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK   ++ D+ ++ +    +  P ++ +E  + L+T  
Sbjct: 34  IQFLYGEDGMDAVWIESQKLDSLKMKKSEFDRVFKYEIDDENWNPSYMLSEHVDDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFRNVFDAEVQKLEADRYQLATEIATTGD 122

[65][TOP]
>UniRef100_B9FZ51 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
           RepID=B9FZ51_ORYSJ
          Length = 1526

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK    + D  +R +    +  P+++  E  + L+T  
Sbjct: 553 IQFLYGEDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIR 612

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 613 EFRNVFEAEVQKLEADRFQLGSEIATTGD 641

[66][TOP]
>UniRef100_B8BAW1 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
            RepID=B8BAW1_ORYSI
          Length = 1449

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK    + D  +R +    +  P+++  E  + L+T  
Sbjct: 852  IQFLYGEDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIR 911

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                    E+ +++ D   L  E+ T GD
Sbjct: 912  EFRNVFEAEVQKLEADRFQLGSEIATTGD 940

[67][TOP]
>UniRef100_A7J592 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pyxine subcinerea
            RepID=A7J592_9LECA
          Length = 1015

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYE---ALRT 171
            VQFLYGEDG+D   IE Q+ + +K   A+ +K +R+D   D P   +SAE  E    +  
Sbjct: 797  VQFLYGEDGLDGATIEPQLLDIIKCSDARFEKMFRVDLMEDDPRTSISAEFLEQATEVAG 856

Query: 172  DPAVEQAMRDEMAQIKEDLRVLRE 243
            +  V+Q +  E  Q+K     LR+
Sbjct: 857  NIEVQQYLDQEFEQLKAAREFLRK 880

[68][TOP]
>UniRef100_A5H2F1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tornabea scutellifera
            RepID=A5H2F1_9LECA
          Length = 993

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMP-----PDWLSAEEYEAL 165
            VQF+YGEDG+D   IE Q  + +    AK +K +R+D   + P     PD+L  E+   +
Sbjct: 776  VQFVYGEDGLDGAHIEPQKLDIIVCSEAKFEKDFRVDLMDNNPRTTISPDFL--EQATVI 833

Query: 166  RTDPAVEQAMRDEMAQIKEDLRVLRE 243
             TD  V++A+ +E  Q+K     LR+
Sbjct: 834  ATDQKVQKALDEEYEQLKAAREFLRK 859

[69][TOP]
>UniRef100_Q71ET6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Magnolia x soulangeana
            RepID=Q71ET6_MAGSO
          Length = 1010

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK    + D  +R +    +  P ++  E  E L+T  
Sbjct: 801  IQFLYGEDGMDAVWIESQKLDSLKMKKREFDNVFRYEFDNANWNPSYMLPEHVEDLKTIR 860

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                    E+ +++ D   L  E+ T GD
Sbjct: 861  EFRNVFDAEVQKLEADRYQLGTEIATTGD 889

[70][TOP]
>UniRef100_Q2TUN6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba
            RepID=Q2TUN6_GINBI
          Length = 1013

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK    + +  Y+ +    +  P ++ A+  E L+T  
Sbjct: 804  IQFLYGEDGMDAVWIESQKLDSLKMKRKEFENVYKYEIDNENWNPGYMLADHVEDLKTIR 863

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                    E+ +++ D R L  E+  +GD
Sbjct: 864  EFRNVFDAEVQKLEADRRQLGTEIAPSGD 892

[71][TOP]
>UniRef100_B7SNX0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Liriodendron
            tulipifera RepID=B7SNX0_LIRTU
          Length = 1010

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK    + D  +R +    +  P ++  E  E L+T  
Sbjct: 801  IQFLYGEDGMDAVWIESQKLDSLKMKKREFDNVFRYEFDNANWNPSYMLPEHVEDLKTIR 860

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                    E+ +++ D   L  E+ T GD
Sbjct: 861  EFRNVFDAEVQKLEADRYQLGTEIATTGD 889

[72][TOP]
>UniRef100_B7SNW7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ceratophyllum demersum
            RepID=B7SNW7_CERDE
          Length = 1010

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK    + D  +R +    +  P ++  E  E L+T  
Sbjct: 801  IQFLYGEDGMDAVWIESQKLDSLKMKKREFDNVFRYEFDNANWNPSYMLPEHVEDLKTIR 860

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                    E+ +++ D   L  E+ T GD
Sbjct: 861  EFRNVFDAEVQKLEADRYQLGTEIATTGD 889

[73][TOP]
>UniRef100_B7SNW6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Beta vulgaris
            RepID=B7SNW6_BETVU
          Length = 1012

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK    + D  +R +    +  P ++  E  E L+T  
Sbjct: 803  IQFLYGEDGMDAVWIESQKLDSLKMKKREFDNVFRYEFDNANWNPSYMLPEHVEDLKTIR 862

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                    E+ +++ D   L  E+ T GD
Sbjct: 863  EFRNVFDAEVQKLEADRYQLGTEIATTGD 891

[74][TOP]
>UniRef100_A1YIA8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Taphrina deformans
            RepID=A1YIA8_9ASCO
          Length = 1001

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTT---RDMPPDWLSAEEYEALRT 171
            + F+YGEDG+DA  +E Q+ + ++   A  ++AYR+D T   R +PP +   E    +  
Sbjct: 787  INFVYGEDGLDAASVEYQVLDTMRLSNAAFEEAYRVDVTDPDRTIPPSFF--EPGHDIDG 844

Query: 172  DPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
            D  V++ +  E  ++ ED R L+  +  +GD
Sbjct: 845  DFEVQKLLDQEFKELSEDRRDLQTLIFPSGD 875

[75][TOP]
>UniRef100_Q1ACT8 RNA polymerase II largest subunit (Fragment) n=1 Tax=Kalanchoe
           tomentosa RepID=Q1ACT8_9MAGN
          Length = 240

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  E LK    + +K +R +    +  P ++  E  E L+T  
Sbjct: 34  IQFLYGEDGMDAVWIETQKLESLKMKKKEFNKVFRYEIDDPNWNPSYMLPEHVEDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFRNVFDAEVQKLEADRYQLGTEIATTGD 122

[76][TOP]
>UniRef100_Q1ACS7 RNA polymerase II largest subunit (Fragment) n=1 Tax=Sedum burrito
           RepID=Q1ACS7_9MAGN
          Length = 240

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  E LK    + +K ++ +    +  P+++ +E  E L+T  
Sbjct: 34  IQFLYGEDGMDAVWIETQKLESLKMKKKEFNKVFKYEIDDPNWNPNYMLSEHVEDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFRNVFDAEVQKLEADRYQLGTEIATTGD 122

[77][TOP]
>UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
            RepID=C5YGY9_SORBI
          Length = 1857

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK    + D  +R +    +  P+++  E  + L+T  
Sbjct: 881  IQFLYGEDGMDAVWIESQKLDSLKMKKPEFDNLFRYELDDENWRPNYMLPEHVDDLKTIR 940

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                    E+ +++ D   L  E+ T GD
Sbjct: 941  EFRNVFEAEVQKLEADRYQLGTEIATTGD 969

[78][TOP]
>UniRef100_Q2PYS8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rozella allomycis
           RepID=Q2PYS8_9FUNG
          Length = 809

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDM---PPDWLSAEEYEALRT 171
           +QF YGEDGMDAV+IE Q  + ++ +  K +  Y++D    M     + L  E  E +  
Sbjct: 600 IQFKYGEDGMDAVKIEKQSLDSMRLNNKKFEIKYKVDFLNPMYGISENVLQKEIIEEILA 659

Query: 172 DPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
            P +  A+  E  Q+ ED  VLR E+  +GD
Sbjct: 660 TPVMLIALDKEYRQLTEDRNVLR-EIFKSGD 689

[79][TOP]
>UniRef100_A1YIC0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Catenaria anguillulae
            RepID=A1YIC0_9FUNG
          Length = 1020

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYE-----AL 165
            +QFLYGEDGMD  R+E Q+ E L+   +K +  +R+D T    P  L +   E      +
Sbjct: 804  IQFLYGEDGMDGTRVESQVLEPLRMSDSKFETRFRVDVTEPDTPRGLRSASVEFGIMKEI 863

Query: 166  RTDPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
            +T   V+  + DE  Q++ D R   ++V   GD
Sbjct: 864  QT-AEVQDLLDDEFRQLQVD-RAQLQQVFKRGD 894

[80][TOP]
>UniRef100_A1YIB5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mucor hiemalis
            RepID=A1YIB5_9FUNG
          Length = 1009

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-TRDMPPDWLSAEEYEALRTDP 177
            ++F YGEDGMDA+ +E Q F  LK +  + +K Y+ID   +      LS    +++    
Sbjct: 795  IEFCYGEDGMDALSVESQKFFSLKCNQEEFEKRYKIDVMNKGFKKGALSYNVLKSIEGSE 854

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
              +  +  E  Q+ ED   LR  +  NGD
Sbjct: 855  TAQAYLDHEFYQLTEDRNKLRTNIFKNGD 883

[81][TOP]
>UniRef100_Q1ACU6 RNA polymerase II largest subunit (Fragment) n=1 Tax=Dillenia
           suffruticosa RepID=Q1ACU6_9MAGN
          Length = 240

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMD+V IE Q  + LK   ++ D+ ++ +    +  P ++  E  E L+T  
Sbjct: 34  IQFLYGEDGMDSVWIESQKLDSLKMKKSEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFRNVFDAEVQKLEADRCQLATEIATTGD 122

[82][TOP]
>UniRef100_Q1ACU3 RNA polymerase II largest subunit (Fragment) n=1 Tax=Hibbertia
           cuneiformis RepID=Q1ACU3_9MAGN
          Length = 240

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMD+V IE Q  + LK   ++ D+ ++ +    +  P ++ +E  + L+T  
Sbjct: 34  IQFLYGEDGMDSVWIESQKLDSLKMKKSEFDRVFKYEIDDENWNPSYMLSEHVDDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFRNVFDAEVQKLEADRYQLATEIATTGD 122

[83][TOP]
>UniRef100_Q1ACU2 RNA polymerase II largest subunit (Fragment) n=1 Tax=Hibbertia
           aspera RepID=Q1ACU2_9MAGN
          Length = 240

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMD+V IE Q  + LK   ++ D+ ++ +    +  P ++  E  E L+T  
Sbjct: 34  IQFLYGEDGMDSVWIESQKLDSLKMKKSEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFRNVFDAEVQKLEADRFQLATEIATTGD 122

[84][TOP]
>UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
            yFS275 RepID=B6JYP8_SCHJY
          Length = 1748

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 28/88 (31%), Positives = 47/88 (53%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA 180
            VQF YGEDG+DA  +E Q+F+ L+      +K YRID   D     +      ++  D A
Sbjct: 870  VQFAYGEDGLDATIVEYQVFDALRLSNVDFEKKYRIDLVEDKK---ICLHMENSIEGDVA 926

Query: 181  VEQAMRDEMAQIKEDLRVLREEVLTNGD 264
            +++ + +E +Q+  D  + R  +  NG+
Sbjct: 927  MQELLDEEYSQLLTDRELCRGFIFPNGE 954

[85][TOP]
>UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
            RepID=A5E6J4_LODEL
          Length = 1745

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-TRDMPPDWLSAEEYEALRTDP 177
            +QF+YGEDG+DA ++E Q  + +       ++ YRID   ++        E  E ++ D 
Sbjct: 858  IQFIYGEDGIDATQVEKQSVDTIPGSDESFERRYRIDVLEKNASISTNLLESGEEIQGDV 917

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
             +++ + +E  Q+ ED + LR+ V  NGD
Sbjct: 918  ELQKILDEEYNQLLEDRKYLRDVVFPNGD 946

[86][TOP]
>UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA
            binding / DNA-directed RNA polymerase n=1 Tax=Vitis
            vinifera RepID=UPI0001985649
          Length = 1848

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK    + D+ ++ +    +  P ++  E  E L+T  
Sbjct: 882  IQFLYGEDGMDAVWIETQKLDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIR 941

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                    E+ +++ D   L  E+ T GD
Sbjct: 942  EFRNVFDAEVQKLEADRFQLGTEIATTGD 970

[87][TOP]
>UniRef100_Q1ACV1 RNA polymerase II largest subunit (Fragment) n=1 Tax=Berberidopsis
           beckleri RepID=Q1ACV1_9MAGN
          Length = 240

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK   +  D+ +R +       P ++  E  E L+T  
Sbjct: 34  IQFLYGEDGMDAVWIESQKLDSLKMKKSDFDRYFRYEIDDESWNPGYMLPEHVEDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFRNVFDAEVQKLEADRFQLGTEIATTGD 122

[88][TOP]
>UniRef100_Q1ACT0 RNA polymerase II largest subunit (Fragment) n=2 Tax=Cucurbitaceae
           RepID=Q1ACT0_9ROSI
          Length = 240

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK    + ++ +R +    +  P+++  E  E L+T  
Sbjct: 34  IQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T G+
Sbjct: 94  EFRNVFEAEVQKLEADRYQLGTEITTTGE 122

[89][TOP]
>UniRef100_Q1ACS4 RNA polymerase II largest subunit (Fragment) n=1 Tax=Vitis
           piasezkii RepID=Q1ACS4_9MAGN
          Length = 240

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK    + D+ ++ +    +  P ++  E  E L+T  
Sbjct: 34  IQFLYGEDGMDAVWIETQKLDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIR 93

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 94  EFRNVFDAEVQKLEADRFQLGTEIATTGD 122

[90][TOP]
>UniRef100_A7NVN7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
           RepID=A7NVN7_VITVI
          Length = 1010

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  + LK    + D+ ++ +    +  P ++  E  E L+T  
Sbjct: 119 IQFLYGEDGMDAVWIETQKLDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIR 178

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                   E+ +++ D   L  E+ T GD
Sbjct: 179 EFRNVFDAEVQKLEADRFQLGTEIATTGD 207

[91][TOP]
>UniRef100_B2W4S0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
            Pt-1C-BFP RepID=B2W4S0_PYRTR
          Length = 1742

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-TRDMP--PDWLSAEEYEALRT 171
            V+F+YGEDG+D   IE Q  + +    A  + AY++D  T D P  P W   E     + 
Sbjct: 875  VEFIYGEDGLDGAYIEKQSMDTIMCSDADFEAAYKLDVLTTDQPEIPVW-KLEGSPMFQG 933

Query: 172  DPAVEQAMRDEMAQIKEDLRVLRE 243
            D  V++A+ +E  QIK D  VLR+
Sbjct: 934  DVDVQRALDEEFEQIKNDRAVLRD 957

[92][TOP]
>UniRef100_A1YIC4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chytriomyces hyalinus
            RepID=A1YIC4_9FUNG
          Length = 1003

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEA--LRTD 174
            VQF YGEDGMD  ++E Q F+ +  +    +K YR+D   D      S ++  A  L  D
Sbjct: 789  VQFCYGEDGMDGGKVEPQPFDLMNCNNRDFEKKYRVDIA-DPRYKLTSLDQKIAGDLLND 847

Query: 175  PAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
            P  +  +  E   + E  R+LRE+V  +GD
Sbjct: 848  PGSQSLLDGEFKYLAEARRILREDVFPSGD 877

[93][TOP]
>UniRef100_A1YIB6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum
            RepID=A1YIB6_9FUNG
          Length = 1018

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRT--- 171
            +QF YGEDGMD   +E Q  + ++    K +K+Y++D             E+  L+    
Sbjct: 802  IQFCYGEDGMDGCHVEKQTLDSIRMANDKFEKSYKVDVMDKEKGFKSGVLEFNILKDVEG 861

Query: 172  DPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
            + + +  + +E  Q+ +D RVLRE + T+GD
Sbjct: 862  NDSTQMMLDEEYRQLCDDRRVLREFIFTSGD 892

[94][TOP]
>UniRef100_Q9AXN1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Botryocladia
            uvarioides RepID=Q9AXN1_9FLOR
          Length = 1712

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTT--------RDMPPDWLSAEEY 156
            V+FLYGEDGMDA  +E Q    LK    +L   Y +D T        R  P  +L  E  
Sbjct: 777  VEFLYGEDGMDATLLEDQTLRTLKMSDERLFDEYYLDPTDAKFGKDSRGRP--YLDWETC 834

Query: 157  EALRTDPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
            +++R D      +R+E  +I+ED  +LR  +  +G+
Sbjct: 835  DSIRQDAQAHILLRNEFQRIREDRDLLRNFIAKSGE 870

[95][TOP]
>UniRef100_Q1L5Y7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Antirrhinum majus
           RepID=Q1L5Y7_ANTMA
          Length = 780

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
           +QFLYGEDGMDAV IE Q  E LK   +  +  YR +  + +  P ++ +E  E L+T  
Sbjct: 559 IQFLYGEDGMDAVWIESQPLESLKLKKSDFNDMYRYEIDSSNWNPSYMLSEAVEDLKTIR 618

Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
            +      E+ +++ D   L   + T GD
Sbjct: 619 EIRSVFDAEVQKLEADRFQLGTGIATTGD 647

[96][TOP]
>UniRef100_B7SNX1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nicotiana tabacum
            RepID=B7SNX1_TOBAC
          Length = 1010

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDK--AYRIDTTRDMPPDWLSAEEYEALRTD 174
            +QFLYGEDGMDAV IE Q  + LK   +  D   AY ID   +  P ++  E  E L+T 
Sbjct: 801  IQFLYGEDGMDAVWIETQKLDSLKAKKSTFDDLYAYEIDDP-NWNPSYMLPEAIEDLKTI 859

Query: 175  PAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
              +      E+ +++ D + L  E+   GD
Sbjct: 860  REIRSVFDAEVQKLQADRKQLGTEIAVTGD 889

[97][TOP]
>UniRef100_B7SNW9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Illicium parviflorum
            RepID=B7SNW9_ILLPA
          Length = 1013

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
            +QFLYGEDGMDAV IE Q  + LK    + +  +R +   D   P ++  E  + L+T  
Sbjct: 804  IQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVFRYEIDNDNWNPSYMLPEHVKDLKTIR 863

Query: 178  AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
                    E+ +++ D   L  E+ T GD
Sbjct: 864  EFRNVFDAEVQKLEADRFQLGTEIATTGD 892

[98][TOP]
>UniRef100_B7G9I2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeodactylum
            tricornutum CCAP 1055/1 RepID=B7G9I2_PHATR
          Length = 1706

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR------DMPPDWLSAEEYEA 162
            VQFLYGEDGMDAV IE Q F+ L     + +K +  DT+       +    +L  +  E 
Sbjct: 810  VQFLYGEDGMDAVWIEKQNFDSLTLAKPEFNKRFLFDTSSPEFGHDEQGIPFLEPDVIEE 869

Query: 163  LRTDPAVEQAMRDEMAQIKEDLRVLR 240
             R DP ++  +  E+  ++ED  +LR
Sbjct: 870  CRRDPDIQATLDQEIEILREDQAILR 895

[99][TOP]
>UniRef100_Q2PYQ8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Paraglomus occultum
           RepID=Q2PYQ8_9GLOM
          Length = 847

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
 Frame = +1

Query: 1   VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR--DMPPDWLSAEEYEALRTD 174
           ++F YGEDG D   +E Q  + L+   A  +K Y ID  +  D+ P  +    ++ +  D
Sbjct: 635 IRFCYGEDGTDGCYVESQTLDSLRLSDADFEKKYYIDLRKDPDLNPSLVDPRVWDRISDD 694

Query: 175 PA--VEQAMRDEMAQIKEDLRVLREEVLTNGD 264
            +   +Q +  E +++ ED ++LRE +  NGD
Sbjct: 695 GSDKYQQHLDQEYSKLLEDRKILREFIFPNGD 726

[100][TOP]
>UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
            RepID=B9WN64_CANDC
          Length = 1735

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID--TTRDMPPDWLSAEEYEALRTD 174
            +QF+YGEDG+D  ++E Q  + +       ++ YRID   T++M  + L  E  + +R D
Sbjct: 864  IQFIYGEDGIDGTQVEKQSVDTIPGSDESFERRYRIDILDTKNMISESL-IESGKEIRGD 922

Query: 175  PAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
              +++ + +E  Q+ +D + LRE    NGD
Sbjct: 923  VQLQKILDEEYNQLLKDRKYLREVCFPNGD 952

[101][TOP]
>UniRef100_A7J591 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anaptychia palmatula
            RepID=A7J591_9LECA
          Length = 1020

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMP-----PDWLSAEEYEAL 165
            VQF+YGEDG+D   IE Q  + +K   AK +K +R+D   + P     PD+L  E+   +
Sbjct: 801  VQFVYGEDGLDGAHIEPQPIDIIKCSDAKFEKDFRVDLMEEDPKTSISPDFL--EQATEI 858

Query: 166  RTDPAVEQAMRDEMAQIKEDLRVLREE 246
              +  V+Q + +E  Q+K     LR++
Sbjct: 859  AGNVQVQQHLDEEFEQLKAAREFLRKD 885

[102][TOP]
>UniRef100_A1YIC2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coelomomyces
            stegomyiae RepID=A1YIC2_9FUNG
          Length = 1014

 Score = 53.1 bits (126), Expect = 9e-06
 Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
 Frame = +1

Query: 1    VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-----TRDMPPDWLSAEEYEAL 165
            +QF+YGEDGMDA+++E Q  + L+ + ++ +  YRID         +PP  +     + +
Sbjct: 798  IQFVYGEDGMDAIQVEKQTLDSLRMNDSRFESKYRIDVMDIEGKAGLPPGCVEFGIQQEM 857

Query: 166  RTDPAVEQAMRDEMAQIKEDLRVLREEVLT 255
            ++   V++ + +E +Q+K+D   LR+  LT
Sbjct: 858  QSID-VQKLLDEEFSQLKDDRACLRKIFLT 886