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[1][TOP]
>UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii
RepID=A8IRZ2_CHLRE
Length = 1789
Score = 182 bits (461), Expect = 1e-44
Identities = 88/88 (100%), Positives = 88/88 (100%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA 180
VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA
Sbjct: 878 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA 937
Query: 181 VEQAMRDEMAQIKEDLRVLREEVLTNGD 264
VEQAMRDEMAQIKEDLRVLREEVLTNGD
Sbjct: 938 VEQAMRDEMAQIKEDLRVLREEVLTNGD 965
[2][TOP]
>UniRef100_Q8MX26 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cercomonas sp. ATCC
50319 RepID=Q8MX26_9EUKA
Length = 1014
Score = 70.9 bits (172), Expect = 4e-11
Identities = 34/88 (38%), Positives = 53/88 (60%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA 180
+QF YGEDGMD V IE Q + LK D A+ K Y++D +R D++ AE E L P
Sbjct: 798 IQFAYGEDGMDGVYIEKQKLDSLKMDNARFLKTYQLDVSRPEQLDFMDAEVREHLLRTPE 857
Query: 181 VEQAMRDEMAQIKEDLRVLREEVLTNGD 264
A+ E+ Q+++D ++LR+++ G+
Sbjct: 858 AHDALETELKQLRDDRQLLRDKIQPTGE 885
[3][TOP]
>UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp.
patens RepID=A9U396_PHYPA
Length = 1742
Score = 65.5 bits (158), Expect = 2e-09
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR-DMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMD+V IE Q + LK A+ ++ YR + R D PD++SAE E ++T
Sbjct: 885 IQFLYGEDGMDSVWIESQKLDSLKMKKAEFNRVYRFEIDRDDWAPDYMSAEAAEDIKTIQ 944
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ E+++++ D R + E+ G+
Sbjct: 945 EIRNVFDAEVSKLEADRRQMGLEIAPTGE 973
[4][TOP]
>UniRef100_C9SR21 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Verticillium
albo-atrum VaMs.102 RepID=C9SR21_9PEZI
Length = 1756
Score = 63.2 bits (152), Expect = 9e-09
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEY-EALRTDP 177
+QFLYGEDG+DA+ IE Q ++L K D Y++D P+ L EY + DP
Sbjct: 877 IQFLYGEDGLDAIYIEKQRMDFLNMSNKKFDDRYKLDVMDANKPEELDWLEYGNEIAGDP 936
Query: 178 AVEQAMRDEMAQIKEDLRVLRE 243
A +Q + +E + ED RV+RE
Sbjct: 937 ASQQLLDEEYEALAEDRRVVRE 958
[5][TOP]
>UniRef100_Q71ET5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nymphaea odorata
RepID=Q71ET5_NYMOD
Length = 1013
Score = 62.0 bits (149), Expect = 2e-08
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK ++ DK ++ + + P +L + E L+T
Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKFEFDDENWDPSYLQPDFVEDLKTIK 863
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
++ E+ +++ D R L E+ T GD
Sbjct: 864 ELQDVFHAEVQKLETDRRQLATEIATTGD 892
[6][TOP]
>UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351
Length = 2085
Score = 61.2 bits (147), Expect = 3e-08
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDA+ IE Q + LK A+ D +R + + P++LS + E L+T
Sbjct: 883 IQFLYGEDGMDAIWIESQKLDSLKMKKAEFDNVFRYELDDENWKPNYLSTQHAEDLKTIS 942
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ E+ +++ D L E+ T GD
Sbjct: 943 EIRNVFEAEVQKLEADRFQLGTEIATTGD 971
[7][TOP]
>UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q5WMZ9_ORYSJ
Length = 1741
Score = 61.2 bits (147), Expect = 3e-08
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDA+ IE Q + LK A+ D +R + + P++LS + E L+T
Sbjct: 830 IQFLYGEDGMDAIWIESQKLDSLKMKKAEFDNVFRYELDDENWKPNYLSTQHAEDLKTIS 889
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ E+ +++ D L E+ T GD
Sbjct: 890 EIRNVFEAEVQKLEADRFQLGTEIATTGD 918
[8][TOP]
>UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=Q0DKN9_ORYSJ
Length = 1834
Score = 61.2 bits (147), Expect = 3e-08
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDA+ IE Q + LK A+ D +R + + P++LS + E L+T
Sbjct: 883 IQFLYGEDGMDAIWIESQKLDSLKMKKAEFDNVFRYELDDENWKPNYLSTQHAEDLKTIS 942
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ E+ +++ D L E+ T GD
Sbjct: 943 EIRNVFEAEVQKLEADRFQLGTEIATTGD 971
[9][TOP]
>UniRef100_A4RMP1 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea
RepID=A4RMP1_MAGGR
Length = 1757
Score = 60.5 bits (145), Expect = 6e-08
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEY-EALRTDP 177
+QF+YGEDG+D + IE Q ++L K D Y++D P L+A EY + DP
Sbjct: 875 IQFIYGEDGLDGMAIEKQKMDHLNISNGKFDGMYKLDLMTATRPRELNALEYGNEIFGDP 934
Query: 178 AVEQAMRDEMAQIKEDLRVLRE 243
AV+Q + +E IK D +++RE
Sbjct: 935 AVQQLLDEEYDAIKADRQLIRE 956
[10][TOP]
>UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata
RepID=Q9AXN0_9RHOD
Length = 1746
Score = 59.7 bits (143), Expect = 1e-07
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT------TRDMPPDWLSAEEYEA 162
VQFLYGEDGMD +E Q L + AKL++ + +D + +L+ E +
Sbjct: 852 VQFLYGEDGMDGAMVEDQNLRTLSMNDAKLEQTFHLDPFDLDFGIGENRRSYLAQEVIDD 911
Query: 163 LRTDPAVEQAMRDEMAQIKEDLRVLREEVL 252
+R DP + +A+ DE AQIK D L+ E++
Sbjct: 912 VRNDPQLIKALEDEFAQIKLDRDRLQREII 941
[11][TOP]
>UniRef100_Q2PYS6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Polychytrium
aggregatum RepID=Q2PYS6_9FUNG
Length = 1016
Score = 59.7 bits (143), Expect = 1e-07
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTT---RDMPPDWLSAEEYEALRT 171
+QF YGEDGMD ++E Q E L AK +KAYR+D T + P L E L +
Sbjct: 805 IQFCYGEDGMDGAKVERQNLESLAMSDAKFEKAYRVDLTGGQYGLKPGVLDFRTQENLLS 864
Query: 172 DPAVEQAMRDEMAQIKEDLRVLREEVLTNG 261
D + + E Q+++D LR + +G
Sbjct: 865 DGLTQNRLDQEFEQLRKDRETLRWTIFKDG 894
[12][TOP]
>UniRef100_Q2PYR5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mortierella
verticillata RepID=Q2PYR5_9FUNG
Length = 1016
Score = 59.7 bits (143), Expect = 1e-07
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 12/100 (12%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTT------RDMPPDW------LS 144
+QF YGEDGMDA +E Q + +K A +K YRID T ++ D+
Sbjct: 796 IQFCYGEDGMDACHVEKQPLDTVKMSNAAFEKKYRIDLTDKSKSFKNGTLDYNVFKQIAE 855
Query: 145 AEEYEALRTDPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
A+E A R +P ++ + E Q+ ED +LR + T GD
Sbjct: 856 ADEEAAKRGEPDMQTLLEQEFKQLDEDRHLLRNYIFTEGD 895
[13][TOP]
>UniRef100_Q1ACT9 RNA polymerase II largest subunit (Fragment) n=1 Tax=Iresine
herbstii RepID=Q1ACT9_IREHE
Length = 240
Score = 59.3 bits (142), Expect = 1e-07
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + DK YR + D PD++ E + L+T
Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKLEFDKTYRYEFDADNWEPDYMLKEHVDDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L ++ T GD
Sbjct: 94 EFRNVFDAEVQKLEVDRCQLATDIATTGD 122
[14][TOP]
>UniRef100_O04144 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spirogyra sp.
RepID=O04144_9VIRI
Length = 613
Score = 59.3 bits (142), Expect = 1e-07
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR-DMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q +K + + D YR + + D PD++ + + +
Sbjct: 392 IQFLYGEDGMDAVWIESQSLPSMKMNKSTFDATYRYEIDQEDWSPDYMDPQFAKDAKIVA 451
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
Q M E+ Q+++D R L E+ GD
Sbjct: 452 EFRQVMDAEVLQLEQDRRTLGLEIAPTGD 480
[15][TOP]
>UniRef100_Q1ACS9 RNA polymerase II largest subunit (Fragment) n=1 Tax=Ruschia herrei
RepID=Q1ACS9_9CARY
Length = 240
Score = 58.9 bits (141), Expect = 2e-07
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK ++ DK +R + + PD++ E + L+T
Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKTFRYEFDAENWEPDYMLKEHVDDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFRNVFDAEVQKLEADRFQLGTEIATTGD 122
[16][TOP]
>UniRef100_Q71ET3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Psilotum nudum
RepID=Q71ET3_PSINU
Length = 1013
Score = 58.5 bits (140), Expect = 2e-07
Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
++FLYGEDGMDAV IE Q + +K + D+ Y + + + PD++ AE E L+T
Sbjct: 804 IEFLYGEDGMDAVWIESQKLDSMKMKTKEFDRMYMFEIDSENWNPDYMLAEHVEDLKTIQ 863
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D R L E+ +GD
Sbjct: 864 EFRNVFDAEVQKLEADRRQLCTEIAPSGD 892
[17][TOP]
>UniRef100_Q2TUN8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Taxus canadensis
RepID=Q2TUN8_TAXCA
Length = 1013
Score = 58.5 bits (140), Expect = 2e-07
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + + YR + ++ P ++ E + L+T
Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDQENWNPSYMLPEHVDDLKTIR 863
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ E+ +++ D R L E+ T GD
Sbjct: 864 EFQNVFDAELQKLESDRRQLGTEIATTGD 892
[18][TOP]
>UniRef100_Q1ACU5 RNA polymerase II largest subunit (Fragment) n=1 Tax=Dionaea
muscipula RepID=Q1ACU5_DIOMU
Length = 240
Score = 58.5 bits (140), Expect = 2e-07
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK ++ KAYR + + P ++ + E L++ P
Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKSEFLKAYRFEYDDPNWNPKYIRPDYIEDLKSIP 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+++++ D +L ++ T GD
Sbjct: 94 EFHDVFEAEISKLESDRLLLATQIATTGD 122
[19][TOP]
>UniRef100_B8BQ02 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335
RepID=B8BQ02_THAPS
Length = 1627
Score = 58.2 bits (139), Expect = 3e-07
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 6/86 (6%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTT------RDMPPDWLSAEEYEA 162
VQFLYGEDGMDAV IE Q F+ L + + D+ Y + + D +L AE E
Sbjct: 872 VQFLYGEDGMDAVWIERQSFDSLTLNKREFDERYLLHSDDPDFGYDDQNIPFLEAEVIED 931
Query: 163 LRTDPAVEQAMRDEMAQIKEDLRVLR 240
R +P V+Q + EM +KED +LR
Sbjct: 932 CRHNPEVQQMLDREMEVLKEDQAMLR 957
[20][TOP]
>UniRef100_B7SNX5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Saruma henryi
RepID=B7SNX5_SARHE
Length = 1009
Score = 58.2 bits (139), Expect = 3e-07
Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK A+ DK +R + + P ++ E E L+T
Sbjct: 800 IQFLYGEDGMDAVWIESQKLDSLKMKKAEFDKVFRYEFDDANWNPSYMLPEHVEDLKTIR 859
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 860 EFRSVFDAEVQKLEADRYQLGTEITTTGD 888
[21][TOP]
>UniRef100_B7SNX2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Papaver orientale
RepID=B7SNX2_PAPOR
Length = 1010
Score = 58.2 bits (139), Expect = 3e-07
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + DK YR + D P+++ ++ E L+
Sbjct: 801 IQFLYGEDGMDAVWIESQKLDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIR 860
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ ++ +D L E+ T GD
Sbjct: 861 EFRHVFDAEVKKLADDRLQLGTEITTTGD 889
[22][TOP]
>UniRef100_Q2PYP9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix sp.
GE13 RepID=Q2PYP9_9FUNG
Length = 813
Score = 58.2 bits (139), Expect = 3e-07
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR---DMPPDWLSAEEYEAL-R 168
+QF YGEDGMD +E Q E ++ AK +K Y+ID T + P L E L +
Sbjct: 601 IQFCYGEDGMDGTSVEKQQLESIRMSDAKFEKFYKIDLTDKDFGLKPKTLQFSILEDLAQ 660
Query: 169 TDPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
V++ + +E ++ED ++ RE + NGD
Sbjct: 661 QSNVVQEKLDEEYKSLQEDRKLFREFIFKNGD 692
[23][TOP]
>UniRef100_A1YIC6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix
frontalis RepID=A1YIC6_NEOFR
Length = 1004
Score = 58.2 bits (139), Expect = 3e-07
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR---DMPPDWLSAEEYEAL-R 168
+QF YGEDGMD +E Q E ++ AK +K Y+ID T + P L E L +
Sbjct: 787 IQFCYGEDGMDGTSVEKQQLESIRMSDAKFEKFYKIDLTDKDFGLKPKTLQFSILEDLAQ 846
Query: 169 TDPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
V++ + +E ++ED ++ RE + NGD
Sbjct: 847 QSNVVQEKLDEEYKSLQEDRKLFREFIFKNGD 878
[24][TOP]
>UniRef100_Q71ET4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Amborella trichopoda
RepID=Q71ET4_AMBTC
Length = 1013
Score = 57.8 bits (138), Expect = 4e-07
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK A+ + Y+ + ++ P ++ E E L+T
Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKRAEFENVYKYEIDQENWSPSYMLPEHVEDLKTIR 863
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ E+ +++ D L E+ T GD
Sbjct: 864 EFQNVFDAEVQKLEADRHQLGTEITTTGD 892
[25][TOP]
>UniRef100_Q1ACT4 RNA polymerase II largest subunit (Fragment) n=1 Tax=Platanus
orientalis RepID=Q1ACT4_PLAOI
Length = 240
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK ++ DK +R + + P ++ E E L+T
Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFRYEIDNENWNPSYMLPEHVEDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ E+ +++ D L E+ T GD
Sbjct: 94 EFQNVFDAEVRKLEADRYQLGTEITTMGD 122
[26][TOP]
>UniRef100_B7SNW8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drimys winteri
RepID=B7SNW8_DRIWI
Length = 1010
Score = 57.8 bits (138), Expect = 4e-07
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
+QFLYGEDGMD+V IE Q + LK A+ D +R + D P ++ E E L+T
Sbjct: 801 IQFLYGEDGMDSVWIESQKLDSLKMKKAEFDNVFRYEIDNDNWNPSYMVPEHVEDLKTIR 860
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 861 EFRNVFDAEVQKLEADRYQLGSEIATTGD 889
[27][TOP]
>UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica
RepID=Q6CBQ3_YARLI
Length = 1750
Score = 57.8 bits (138), Expect = 4e-07
Identities = 30/88 (34%), Positives = 48/88 (54%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA 180
+QF+YGEDG+D ++E Q + + ++ Y+ID L+ E + D
Sbjct: 869 IQFVYGEDGLDGAQVEKQTVDTIPGSDESFERRYKIDLMNPKTKP-LNIESGNDIVGDVE 927
Query: 181 VEQAMRDEMAQIKEDLRVLREEVLTNGD 264
V++ + +E Q+ D R+LREEV TNGD
Sbjct: 928 VQRVLDEEYNQLLTDRRLLREEVFTNGD 955
[28][TOP]
>UniRef100_Q2PYR1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spiromyces aspiralis
RepID=Q2PYR1_9FUNG
Length = 1022
Score = 57.8 bits (138), Expect = 4e-07
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRI---DTTRDMPPDWLSAEEYEALRT 171
VQF YGEDGMD+ +EGQ +++ K + Y + D+ + P L + +
Sbjct: 811 VQFTYGEDGMDSTHLEGQSVNLVRYSDKKFESTYFVDVMDSEKSFPSGTLEFSVLKNVEG 870
Query: 172 DPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ V++ + DE Q+KED +LR+ + +G+
Sbjct: 871 NDEVQRVLDDEYEQLKEDRHILRKFIARDGE 901
[29][TOP]
>UniRef100_Q1L5Z5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhododendron
macrophyllum RepID=Q1L5Z5_RHOMC
Length = 589
Score = 57.4 bits (137), Expect = 5e-07
Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK ++ DK +R + + P ++ AE E L+T
Sbjct: 391 IQFLYGEDGMDAVWIETQRLDSLKMKKSEFDKKFRYEIDDGNWNPSYMLAEHVEDLKTIR 450
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 451 EFRNVFDAEVQKLEADRLQLGTEIATTGD 479
[30][TOP]
>UniRef100_Q1ACU8 RNA polymerase II largest subunit (Fragment) n=1 Tax=Buxus
sempervirens RepID=Q1ACU8_BUXSE
Length = 240
Score = 57.4 bits (137), Expect = 5e-07
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK A DK +R + + P ++ E E L+T
Sbjct: 34 IQFLYGEDGMDAVWIEDQKLDSLKMKKADFDKVFRYEIDDENWSPSYMLPEHVEDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFRNVFDAEVQKLQADRFQLGTEIATTGD 122
[31][TOP]
>UniRef100_Q1ACT5 RNA polymerase II largest subunit (Fragment) n=1 Tax=Platanus
orientalis RepID=Q1ACT5_PLAOI
Length = 240
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK ++ DK +R + + P ++ E E L+T
Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFRYEIDNENWNPSYMLPEHVEDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFRNVFDAEVQKLEADRFQLGTEIATTGD 122
[32][TOP]
>UniRef100_Q1ACT2 RNA polymerase II largest subunit (Fragment) n=1 Tax=Nepenthes
ampullaria RepID=Q1ACT2_9CARY
Length = 240
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMD+V IE Q E LK ++ D YR + D P+++ + E L+T
Sbjct: 34 IQFLYGEDGMDSVWIESQKLESLKIKKSEFDMVYRYELNDEDWNPNYMLPDHVEDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFRNVFDAEVQKLEADRFQLATEIATTGD 122
[33][TOP]
>UniRef100_Q1ACS3 RNA polymerase II largest subunit (Fragment) n=1 Tax=Vitis
piasezkii RepID=Q1ACS3_9MAGN
Length = 240
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q E LK + D+A+R + + P+++ E E L+T
Sbjct: 34 IQFLYGEDGMDAVWIESQKLESLKMKGMEFDRAFRYEIDDENWNPNYMFREHAEDLKTIQ 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ + GD
Sbjct: 94 EFRNVFDAEVQKLEADRNQLGTEIASTGD 122
[34][TOP]
>UniRef100_A7R1R2 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A7R1R2_VITVI
Length = 429
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q E LK + D+A+R + + P+++ E E L+T
Sbjct: 139 IQFLYGEDGMDAVWIESQKLESLKMKGMEFDRAFRYEIDDENWNPNYMFREHAEDLKTIQ 198
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ + GD
Sbjct: 199 EFRNVFDAEVQKLEADRNQLGTEIASTGD 227
[35][TOP]
>UniRef100_Q7SDN0 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa
RepID=Q7SDN0_NEUCR
Length = 1752
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-TRDMPPDWLSAEEY-EALRTD 174
+QF+YGEDG+D + IE Q ++ DK YR+D ++ L A EY + L +D
Sbjct: 878 IQFVYGEDGLDGIAIENQPVDHFTISNKAFDKRYRLDVMDEEVSSGELEALEYGKELASD 937
Query: 175 PAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
P V++ + E Q+ D +LRE T G+
Sbjct: 938 PTVQELLDQEYEQLSVDRHMLREIQRTKGN 967
[36][TOP]
>UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium
discoideum RepID=RPB1_DICDI
Length = 1727
Score = 57.4 bits (137), Expect = 5e-07
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR-DMPPDWLSAEEYEALRTDP 177
+QF YGEDG+D +E Q + L+ D +L++ YR + D W+ E +R D
Sbjct: 873 IQFAYGEDGIDGCFVENQSIDSLRKDNTELERMYRHQVDKPDYGDGWMDPLVIEHVRNDS 932
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ E +IK D +LR E++ +G+
Sbjct: 933 LTRDTLEKEFERIKSDRSLLRNEIIPSGE 961
[37][TOP]
>UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis
thaliana RepID=RPB1_ARATH
Length = 1840
Score = 57.4 bits (137), Expect = 5e-07
Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK ++ D+ ++ + + P +LS E E L+
Sbjct: 884 IQFLYGEDGMDAVWIESQKLDSLKMKKSEFDRTFKYEIDDENWNPTYLSDEHLEDLKGIR 943
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ E ++++ D L E+ TNGD
Sbjct: 944 ELRDVFDAEYSKLETDRFQLGTEIATNGD 972
[38][TOP]
>UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max
RepID=Q99368_SOYBN
Length = 977
Score = 57.0 bits (136), Expect = 6e-07
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDA+ IE Q + LK + D+ +R + + P+++ E E L+T
Sbjct: 74 IQFLYGEDGMDAIWIETQKLDTLKMKKTEFDRVFRYEFDEENWKPNYMLQEPVEDLKTIR 133
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ +NGD
Sbjct: 134 EFRNVFEAEVQKLEADRHQLAIEIASNGD 162
[39][TOP]
>UniRef100_Q1ACV0 RNA polymerase II largest subunit (Fragment) n=1 Tax=Berberidopsis
beckleri RepID=Q1ACV0_9MAGN
Length = 240
Score = 57.0 bits (136), Expect = 6e-07
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-TRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + ++ +R + + P ++ E E L+T P
Sbjct: 34 IQFLYGEDGMDAVWIEFQKLDSLKMKKSDFBRVFRYEIGDENWNPTFMLPEHVEGLKTIP 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFGNVFEAEIRKLEADRYQLGTEIATTGD 122
[40][TOP]
>UniRef100_Q1ACU4 RNA polymerase II largest subunit (Fragment) n=1 Tax=Gunnera
chilensis RepID=Q1ACU4_GUNCH
Length = 240
Score = 57.0 bits (136), Expect = 6e-07
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK A+ DK ++ + + P ++ E E L+T
Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKAEFDKVFKYEIDDENWNPSYMLPEHVEDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFRNVFDAEVQKLEADRFQLGTEIATTGD 122
[41][TOP]
>UniRef100_Q1ACT1 RNA polymerase II largest subunit (Fragment) n=1 Tax=Quercus
coccinea RepID=Q1ACT1_9ROSI
Length = 240
Score = 57.0 bits (136), Expect = 6e-07
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMD+V IE Q E LK ++ +K +R + PD++ E E L+T
Sbjct: 34 IQFLYGEDGMDSVWIESQKLESLKMKKSEFNKTFRYEFDDEHWNPDYMMQEHIEDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFRNVFDAEVQKLEADRFQLGTEIATTGD 122
[42][TOP]
>UniRef100_Q1ACV3 RNA polymerase II largest subunit (Fragment) n=1 Tax=Acer palmatum
RepID=Q1ACV3_ACEPM
Length = 240
Score = 56.6 bits (135), Expect = 8e-07
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q+ + LK + +K +R + +D P+++ E + L+T
Sbjct: 34 IQFLYGEDGMDAVWIETQILDSLKIKKSDFNKTFRFEMDQDNWNPNYMLQEFIDBLKTIK 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ E+ +++ D L E+ T+GD
Sbjct: 94 ELRDVFDAEVQKLEADRYQLATEIATSGD 122
[43][TOP]
>UniRef100_Q71EU1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Zamia muricata
RepID=Q71EU1_9SPER
Length = 1013
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + + YR + + P ++ E E L+T
Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKRPEFENVYRYEIDNENWNPSYMLPEHVEDLKTIR 863
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ E+ +++ D R L E+ +GD
Sbjct: 864 EFQNVFDAEVQKLEADRRQLGTEIAPSGD 892
[44][TOP]
>UniRef100_Q2TUN9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Thuja occidentalis
RepID=Q2TUN9_THUOC
Length = 1013
Score = 56.2 bits (134), Expect = 1e-06
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + + YR + ++ P ++ E + L+T
Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKRKEFENVYRYEIDQENWNPSYMLPEHVDDLKTIR 863
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ E+ +++ D R L E+ +GD
Sbjct: 864 EFQNVFDAELQKLESDRRQLGTEIAPSGD 892
[45][TOP]
>UniRef100_Q1ACU7 RNA polymerase II largest subunit (Fragment) n=1 Tax=Cissus
tuberosa RepID=Q1ACU7_9MAGN
Length = 240
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK A+ D+ ++ + + P ++ E E L+T
Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKAEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFRNVFDAEVQKLEADRYQLGTEIATTGD 122
[46][TOP]
>UniRef100_Q1ACT3 RNA polymerase II largest subunit (Fragment) n=1 Tax=Nelumbo
nucifera RepID=Q1ACT3_NELNU
Length = 240
Score = 56.2 bits (134), Expect = 1e-06
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK ++ DK +R + + P ++ E E L+T
Sbjct: 34 IQFLYGEDGMDAVWIETQKLDSLKMRKSEFDKVFRYEIDDENWNPSYMLPEHVEDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFRNVFDAEVQKLEADRYQLGTEIATTGD 122
[47][TOP]
>UniRef100_B7SNW5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Asparagus officinalis
RepID=B7SNW5_ASPOF
Length = 1009
Score = 56.2 bits (134), Expect = 1e-06
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + + YR + P ++ E E L+T P
Sbjct: 800 IQFLYGEDGMDAVWIESQKLDSLKMKKKEFNNVYRYEIDDNQWDPSYMLPEHVEDLKTIP 859
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L ++ T GD
Sbjct: 860 EFRNVFDAEVQKLEADRFQLGTDIATTGD 888
[48][TOP]
>UniRef100_Q71EU0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cycas revoluta
RepID=Q71EU0_CYCRE
Length = 1013
Score = 55.8 bits (133), Expect = 1e-06
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK ++ + YR + + P ++ E E L+T
Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKRSEFENVYRYEIDNENWNPSYMLPEHVEDLKTIR 863
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ ++ +++ D R L E+ +GD
Sbjct: 864 EFQNVFDAQVQKLEADRRQLGTEIAPSGD 892
[49][TOP]
>UniRef100_Q71ET9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra
RepID=Q71ET9_9CONI
Length = 1013
Score = 55.8 bits (133), Expect = 1e-06
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + + Y+ + ++ P ++ E E L+T
Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYKYELDQENWNPSYMLPEHVEDLKTIR 863
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ E+ +++ D R L E+ +GD
Sbjct: 864 EFQNVFDAEVQKLESDRRQLGMEIAPSGD 892
[50][TOP]
>UniRef100_Q1ACS5 RNA polymerase II largest subunit (Fragment) n=1 Tax=Tetracentron
sinense RepID=Q1ACS5_9MAGN
Length = 240
Score = 55.8 bits (133), Expect = 1e-06
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK ++ DK +R + + P ++ E E L+T
Sbjct: 34 IQFLYGEDGMDAVWIETQKLDSLKMKKSEFDKVFRYEIDNENWNPSYMLPEHVEDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ ++ D L E+ T GD
Sbjct: 94 EFRNVFDAEVQKLAADRCQLGTEIATTGD 122
[51][TOP]
>UniRef100_Q2PYS1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum
RepID=Q2PYS1_9FUNG
Length = 1015
Score = 55.8 bits (133), Expect = 1e-06
Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT---TRDMPPDWLSAEEYEALRT 171
+QF YGEDGMD +E Q + ++ K +K+Y++D + P L + +
Sbjct: 804 IQFCYGEDGMDGCFVEKQTLDSIRMSNEKFEKSYKVDVMDKEKGFKPGVLEFNILKDVEG 863
Query: 172 DPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ + + + +E Q+ +D RVLRE + T+GD
Sbjct: 864 NDSTQMMLDEEYRQLCDDRRVLREFIFTSGD 894
[52][TOP]
>UniRef100_A7J5B1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Teloschistes exilis
RepID=A7J5B1_9LECA
Length = 1003
Score = 55.8 bits (133), Expect = 1e-06
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYE---ALRT 171
VQF+YGEDG+D IE Q + + AK +K +RID D P +SAE E +
Sbjct: 785 VQFVYGEDGLDGAHIEPQRLDIIVCSDAKFEKDFRIDLMDDNPRTTVSAEFLEQATEIAA 844
Query: 172 DPAVEQAMRDEMAQIKEDLRVLRE 243
D V+Q + +E Q+K LR+
Sbjct: 845 DGKVQQVLDEEYEQLKAAREFLRK 868
[53][TOP]
>UniRef100_A7J588 DNA-directed RNA polymerase (Fragment) n=1 Tax=Heterodermia vulgaris
RepID=A7J588_9LECA
Length = 996
Score = 55.8 bits (133), Expect = 1e-06
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 3/84 (3%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYE---ALRT 171
VQF+YGEDG+D IE Q + + AK +K +RID D P +SAE E +
Sbjct: 778 VQFVYGEDGLDGAHIEPQRLDIIVCSDAKFEKDFRIDLMDDNPRTTVSAEFLEQATEIAA 837
Query: 172 DPAVEQAMRDEMAQIKEDLRVLRE 243
D V+Q + +E Q+K LR+
Sbjct: 838 DGKVQQVLDEEYEQLKAAREFLRK 861
[54][TOP]
>UniRef100_Q1ACU9 RNA polymerase II largest subunit (Fragment) n=1 Tax=Berberidopsis
corallina RepID=Q1ACU9_9MAGN
Length = 240
Score = 55.5 bits (132), Expect = 2e-06
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-TRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + D+ +R + + P ++ E E L+T
Sbjct: 34 IQFLYGEDGMDAVGIEFQKLDSLKMKKSDFDRVFRYEIGDENWNPTYMLPEHVEGLKTIL 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFSNVFEAEIRKLEADRYQLGTEIATTGD 122
[55][TOP]
>UniRef100_B7SNX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pisum sativum
RepID=B7SNX4_PEA
Length = 1010
Score = 55.5 bits (132), Expect = 2e-06
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK D+A+R + + P ++ E E L+T
Sbjct: 801 IQFLYGEDGMDAVWIETQKLDSLKMKKTDFDRAFRYEFDDENWKPTYMLEEPVEDLKTIR 860
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ ++ D L E+ T GD
Sbjct: 861 EFRNVFEAEVQKLDADRFQLATEIATTGD 889
[56][TOP]
>UniRef100_B9PMD7 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii
RepID=B9PMD7_TOXGO
Length = 1892
Score = 55.5 bits (132), Expect = 2e-06
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
+QFLYGEDGM +E Q E + D KL + YR D ++ WLS E + TD
Sbjct: 890 LQFLYGEDGMSGEFVEDQTVELMTLDNEKLKRLYRHDVDQESYGKGWLSDELRNEILTDY 949
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
++Q + +E I+ED L + +G+
Sbjct: 950 ELQQPLEEEFEAIREDKNRLCRHIFKDGE 978
[57][TOP]
>UniRef100_B6KEC6 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49
RepID=B6KEC6_TOXGO
Length = 1892
Score = 55.5 bits (132), Expect = 2e-06
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
+QFLYGEDGM +E Q E + D KL + YR D ++ WLS E + TD
Sbjct: 890 LQFLYGEDGMSGEFVEDQTVELMTLDNEKLKRLYRHDVDQESYGKGWLSDELRNEILTDY 949
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
++Q + +E I+ED L + +G+
Sbjct: 950 ELQQPLEEEFEAIREDKNRLCRHIFKDGE 978
[58][TOP]
>UniRef100_B2AA31 DNA-directed RNA polymerase n=1 Tax=Podospora anserina
RepID=B2AA31_PODAN
Length = 1748
Score = 55.5 bits (132), Expect = 2e-06
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 2/83 (2%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEY-EALRTD 174
+QF+YGEDG+D + IE Q +++ + AK DK +R+D + L A EY + +D
Sbjct: 877 IQFVYGEDGLDGIAIEKQKVDHMNLNNAKFDKRFRLDVMDETSSAAALDALEYGREMVSD 936
Query: 175 PAVEQAMRDEMAQIKEDLRVLRE 243
PAV+ + +E Q+ D + +RE
Sbjct: 937 PAVQSLLDEEYEQLLADRKQVRE 959
[59][TOP]
>UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1
Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO
Length = 1752
Score = 55.5 bits (132), Expect = 2e-06
Identities = 29/88 (32%), Positives = 47/88 (53%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA 180
+QF YGEDG+DA +E Q+F+ L+ + +K YRID D LS ++ D +
Sbjct: 870 IQFAYGEDGLDATLVEYQVFDSLRLSTKQFEKKYRIDLMEDRS---LSLYMENSIENDSS 926
Query: 181 VEQAMRDEMAQIKEDLRVLREEVLTNGD 264
V+ + +E Q+ D +L + + GD
Sbjct: 927 VQDLLDEEYTQLVADRELLCKFIFPKGD 954
[60][TOP]
>UniRef100_Q71ET8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Welwitschia mirabilis
RepID=Q71ET8_WELMI
Length = 1013
Score = 55.1 bits (131), Expect = 2e-06
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +1
Query: 4 QFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDPA 180
QFLYGEDGMDAV IE Q + LK + D Y+ + ++ P ++ E E L+T
Sbjct: 805 QFLYGEDGMDAVWIESQKLDSLKMKKREFDDVYKYELDQENWNPGYMLPEHIEDLKTIRE 864
Query: 181 VEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ E+ ++ D R L E+ +GD
Sbjct: 865 FQNVCDAEVQHLENDRRQLGTEIAPSGD 892
[61][TOP]
>UniRef100_Q71ET7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Zea mays
RepID=Q71ET7_MAIZE
Length = 1009
Score = 55.1 bits (131), Expect = 2e-06
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + D +R + + P+++ E + L+T
Sbjct: 800 IQFLYGEDGMDAVWIESQKLDSLKMKKPEFDNVFRYELDDENWRPNYMLPEHVDDLKTIR 859
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 860 EFRNVFEAEVQKLEADRYQLGSEITTTGD 888
[62][TOP]
>UniRef100_Q2TUN7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Podocarpus
macrophyllus RepID=Q2TUN7_9CONI
Length = 1013
Score = 55.1 bits (131), Expect = 2e-06
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + + Y+ + ++ P ++ E E L+T
Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKRKEFENVYKYEVDQENWNPIYMLPEHVEDLKTIR 863
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ E+ +++ D R L E+ +GD
Sbjct: 864 EFQNVFDAEVQKLESDRRQLGTEIAPSGD 892
[63][TOP]
>UniRef100_Q1ACV2 RNA polymerase II largest subunit (Fragment) n=1 Tax=Aextoxicon
punctatum RepID=Q1ACV2_9MAGN
Length = 240
Score = 55.1 bits (131), Expect = 2e-06
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + D+ +R + + P ++ E E L+T
Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKSDFDRVFRYEIDDENWNPSYMLPEHVEDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFRNVFDAEVQKLEADRFQLGTEIATTGD 122
[64][TOP]
>UniRef100_Q1ACU1 RNA polymerase II largest subunit (Fragment) n=1 Tax=Hibbertia
scandens RepID=Q1ACU1_9MAGN
Length = 240
Score = 55.1 bits (131), Expect = 2e-06
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK ++ D+ ++ + + P ++ +E + L+T
Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKSEFDRVFKYEIDDENWNPSYMLSEHVDDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFRNVFDAEVQKLEADRYQLATEIATTGD 122
[65][TOP]
>UniRef100_B9FZ51 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group
RepID=B9FZ51_ORYSJ
Length = 1526
Score = 55.1 bits (131), Expect = 2e-06
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + D +R + + P+++ E + L+T
Sbjct: 553 IQFLYGEDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIR 612
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 613 EFRNVFEAEVQKLEADRFQLGSEIATTGD 641
[66][TOP]
>UniRef100_B8BAW1 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group
RepID=B8BAW1_ORYSI
Length = 1449
Score = 55.1 bits (131), Expect = 2e-06
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + D +R + + P+++ E + L+T
Sbjct: 852 IQFLYGEDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIR 911
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 912 EFRNVFEAEVQKLEADRFQLGSEIATTGD 940
[67][TOP]
>UniRef100_A7J592 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pyxine subcinerea
RepID=A7J592_9LECA
Length = 1015
Score = 55.1 bits (131), Expect = 2e-06
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYE---ALRT 171
VQFLYGEDG+D IE Q+ + +K A+ +K +R+D D P +SAE E +
Sbjct: 797 VQFLYGEDGLDGATIEPQLLDIIKCSDARFEKMFRVDLMEDDPRTSISAEFLEQATEVAG 856
Query: 172 DPAVEQAMRDEMAQIKEDLRVLRE 243
+ V+Q + E Q+K LR+
Sbjct: 857 NIEVQQYLDQEFEQLKAAREFLRK 880
[68][TOP]
>UniRef100_A5H2F1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tornabea scutellifera
RepID=A5H2F1_9LECA
Length = 993
Score = 55.1 bits (131), Expect = 2e-06
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMP-----PDWLSAEEYEAL 165
VQF+YGEDG+D IE Q + + AK +K +R+D + P PD+L E+ +
Sbjct: 776 VQFVYGEDGLDGAHIEPQKLDIIVCSEAKFEKDFRVDLMDNNPRTTISPDFL--EQATVI 833
Query: 166 RTDPAVEQAMRDEMAQIKEDLRVLRE 243
TD V++A+ +E Q+K LR+
Sbjct: 834 ATDQKVQKALDEEYEQLKAAREFLRK 859
[69][TOP]
>UniRef100_Q71ET6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Magnolia x soulangeana
RepID=Q71ET6_MAGSO
Length = 1010
Score = 54.7 bits (130), Expect = 3e-06
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + D +R + + P ++ E E L+T
Sbjct: 801 IQFLYGEDGMDAVWIESQKLDSLKMKKREFDNVFRYEFDNANWNPSYMLPEHVEDLKTIR 860
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 861 EFRNVFDAEVQKLEADRYQLGTEIATTGD 889
[70][TOP]
>UniRef100_Q2TUN6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba
RepID=Q2TUN6_GINBI
Length = 1013
Score = 54.7 bits (130), Expect = 3e-06
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + + Y+ + + P ++ A+ E L+T
Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKRKEFENVYKYEIDNENWNPGYMLADHVEDLKTIR 863
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D R L E+ +GD
Sbjct: 864 EFRNVFDAEVQKLEADRRQLGTEIAPSGD 892
[71][TOP]
>UniRef100_B7SNX0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Liriodendron
tulipifera RepID=B7SNX0_LIRTU
Length = 1010
Score = 54.7 bits (130), Expect = 3e-06
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + D +R + + P ++ E E L+T
Sbjct: 801 IQFLYGEDGMDAVWIESQKLDSLKMKKREFDNVFRYEFDNANWNPSYMLPEHVEDLKTIR 860
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 861 EFRNVFDAEVQKLEADRYQLGTEIATTGD 889
[72][TOP]
>UniRef100_B7SNW7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ceratophyllum demersum
RepID=B7SNW7_CERDE
Length = 1010
Score = 54.7 bits (130), Expect = 3e-06
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + D +R + + P ++ E E L+T
Sbjct: 801 IQFLYGEDGMDAVWIESQKLDSLKMKKREFDNVFRYEFDNANWNPSYMLPEHVEDLKTIR 860
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 861 EFRNVFDAEVQKLEADRYQLGTEIATTGD 889
[73][TOP]
>UniRef100_B7SNW6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Beta vulgaris
RepID=B7SNW6_BETVU
Length = 1012
Score = 54.7 bits (130), Expect = 3e-06
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + D +R + + P ++ E E L+T
Sbjct: 803 IQFLYGEDGMDAVWIESQKLDSLKMKKREFDNVFRYEFDNANWNPSYMLPEHVEDLKTIR 862
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 863 EFRNVFDAEVQKLEADRYQLGTEIATTGD 891
[74][TOP]
>UniRef100_A1YIA8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Taphrina deformans
RepID=A1YIA8_9ASCO
Length = 1001
Score = 54.7 bits (130), Expect = 3e-06
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 3/91 (3%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTT---RDMPPDWLSAEEYEALRT 171
+ F+YGEDG+DA +E Q+ + ++ A ++AYR+D T R +PP + E +
Sbjct: 787 INFVYGEDGLDAASVEYQVLDTMRLSNAAFEEAYRVDVTDPDRTIPPSFF--EPGHDIDG 844
Query: 172 DPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
D V++ + E ++ ED R L+ + +GD
Sbjct: 845 DFEVQKLLDQEFKELSEDRRDLQTLIFPSGD 875
[75][TOP]
>UniRef100_Q1ACT8 RNA polymerase II largest subunit (Fragment) n=1 Tax=Kalanchoe
tomentosa RepID=Q1ACT8_9MAGN
Length = 240
Score = 54.3 bits (129), Expect = 4e-06
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q E LK + +K +R + + P ++ E E L+T
Sbjct: 34 IQFLYGEDGMDAVWIETQKLESLKMKKKEFNKVFRYEIDDPNWNPSYMLPEHVEDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFRNVFDAEVQKLEADRYQLGTEIATTGD 122
[76][TOP]
>UniRef100_Q1ACS7 RNA polymerase II largest subunit (Fragment) n=1 Tax=Sedum burrito
RepID=Q1ACS7_9MAGN
Length = 240
Score = 54.3 bits (129), Expect = 4e-06
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q E LK + +K ++ + + P+++ +E E L+T
Sbjct: 34 IQFLYGEDGMDAVWIETQKLESLKMKKKEFNKVFKYEIDDPNWNPNYMLSEHVEDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFRNVFDAEVQKLEADRYQLGTEIATTGD 122
[77][TOP]
>UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor
RepID=C5YGY9_SORBI
Length = 1857
Score = 54.3 bits (129), Expect = 4e-06
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + D +R + + P+++ E + L+T
Sbjct: 881 IQFLYGEDGMDAVWIESQKLDSLKMKKPEFDNLFRYELDDENWRPNYMLPEHVDDLKTIR 940
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 941 EFRNVFEAEVQKLEADRYQLGTEIATTGD 969
[78][TOP]
>UniRef100_Q2PYS8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rozella allomycis
RepID=Q2PYS8_9FUNG
Length = 809
Score = 54.3 bits (129), Expect = 4e-06
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDM---PPDWLSAEEYEALRT 171
+QF YGEDGMDAV+IE Q + ++ + K + Y++D M + L E E +
Sbjct: 600 IQFKYGEDGMDAVKIEKQSLDSMRLNNKKFEIKYKVDFLNPMYGISENVLQKEIIEEILA 659
Query: 172 DPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
P + A+ E Q+ ED VLR E+ +GD
Sbjct: 660 TPVMLIALDKEYRQLTEDRNVLR-EIFKSGD 689
[79][TOP]
>UniRef100_A1YIC0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Catenaria anguillulae
RepID=A1YIC0_9FUNG
Length = 1020
Score = 54.3 bits (129), Expect = 4e-06
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 5/93 (5%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYE-----AL 165
+QFLYGEDGMD R+E Q+ E L+ +K + +R+D T P L + E +
Sbjct: 804 IQFLYGEDGMDGTRVESQVLEPLRMSDSKFETRFRVDVTEPDTPRGLRSASVEFGIMKEI 863
Query: 166 RTDPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+T V+ + DE Q++ D R ++V GD
Sbjct: 864 QT-AEVQDLLDDEFRQLQVD-RAQLQQVFKRGD 894
[80][TOP]
>UniRef100_A1YIB5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mucor hiemalis
RepID=A1YIB5_9FUNG
Length = 1009
Score = 54.3 bits (129), Expect = 4e-06
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-TRDMPPDWLSAEEYEALRTDP 177
++F YGEDGMDA+ +E Q F LK + + +K Y+ID + LS +++
Sbjct: 795 IEFCYGEDGMDALSVESQKFFSLKCNQEEFEKRYKIDVMNKGFKKGALSYNVLKSIEGSE 854
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ + E Q+ ED LR + NGD
Sbjct: 855 TAQAYLDHEFYQLTEDRNKLRTNIFKNGD 883
[81][TOP]
>UniRef100_Q1ACU6 RNA polymerase II largest subunit (Fragment) n=1 Tax=Dillenia
suffruticosa RepID=Q1ACU6_9MAGN
Length = 240
Score = 53.9 bits (128), Expect = 5e-06
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMD+V IE Q + LK ++ D+ ++ + + P ++ E E L+T
Sbjct: 34 IQFLYGEDGMDSVWIESQKLDSLKMKKSEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFRNVFDAEVQKLEADRCQLATEIATTGD 122
[82][TOP]
>UniRef100_Q1ACU3 RNA polymerase II largest subunit (Fragment) n=1 Tax=Hibbertia
cuneiformis RepID=Q1ACU3_9MAGN
Length = 240
Score = 53.9 bits (128), Expect = 5e-06
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMD+V IE Q + LK ++ D+ ++ + + P ++ +E + L+T
Sbjct: 34 IQFLYGEDGMDSVWIESQKLDSLKMKKSEFDRVFKYEIDDENWNPSYMLSEHVDDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFRNVFDAEVQKLEADRYQLATEIATTGD 122
[83][TOP]
>UniRef100_Q1ACU2 RNA polymerase II largest subunit (Fragment) n=1 Tax=Hibbertia
aspera RepID=Q1ACU2_9MAGN
Length = 240
Score = 53.9 bits (128), Expect = 5e-06
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMD+V IE Q + LK ++ D+ ++ + + P ++ E E L+T
Sbjct: 34 IQFLYGEDGMDSVWIESQKLDSLKMKKSEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFRNVFDAEVQKLEADRFQLATEIATTGD 122
[84][TOP]
>UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus
yFS275 RepID=B6JYP8_SCHJY
Length = 1748
Score = 53.9 bits (128), Expect = 5e-06
Identities = 28/88 (31%), Positives = 47/88 (53%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA 180
VQF YGEDG+DA +E Q+F+ L+ +K YRID D + ++ D A
Sbjct: 870 VQFAYGEDGLDATIVEYQVFDALRLSNVDFEKKYRIDLVEDKK---ICLHMENSIEGDVA 926
Query: 181 VEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+++ + +E +Q+ D + R + NG+
Sbjct: 927 MQELLDEEYSQLLTDRELCRGFIFPNGE 954
[85][TOP]
>UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus
RepID=A5E6J4_LODEL
Length = 1745
Score = 53.9 bits (128), Expect = 5e-06
Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-TRDMPPDWLSAEEYEALRTDP 177
+QF+YGEDG+DA ++E Q + + ++ YRID ++ E E ++ D
Sbjct: 858 IQFIYGEDGIDATQVEKQSVDTIPGSDESFERRYRIDVLEKNASISTNLLESGEEIQGDV 917
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+++ + +E Q+ ED + LR+ V NGD
Sbjct: 918 ELQKILDEEYNQLLEDRKYLRDVVFPNGD 946
[86][TOP]
>UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA
binding / DNA-directed RNA polymerase n=1 Tax=Vitis
vinifera RepID=UPI0001985649
Length = 1848
Score = 53.5 bits (127), Expect = 7e-06
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + D+ ++ + + P ++ E E L+T
Sbjct: 882 IQFLYGEDGMDAVWIETQKLDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIR 941
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 942 EFRNVFDAEVQKLEADRFQLGTEIATTGD 970
[87][TOP]
>UniRef100_Q1ACV1 RNA polymerase II largest subunit (Fragment) n=1 Tax=Berberidopsis
beckleri RepID=Q1ACV1_9MAGN
Length = 240
Score = 53.5 bits (127), Expect = 7e-06
Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + D+ +R + P ++ E E L+T
Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKSDFDRYFRYEIDDESWNPGYMLPEHVEDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFRNVFDAEVQKLEADRFQLGTEIATTGD 122
[88][TOP]
>UniRef100_Q1ACT0 RNA polymerase II largest subunit (Fragment) n=2 Tax=Cucurbitaceae
RepID=Q1ACT0_9ROSI
Length = 240
Score = 53.5 bits (127), Expect = 7e-06
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + ++ +R + + P+++ E E L+T
Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T G+
Sbjct: 94 EFRNVFEAEVQKLEADRYQLGTEITTTGE 122
[89][TOP]
>UniRef100_Q1ACS4 RNA polymerase II largest subunit (Fragment) n=1 Tax=Vitis
piasezkii RepID=Q1ACS4_9MAGN
Length = 240
Score = 53.5 bits (127), Expect = 7e-06
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + D+ ++ + + P ++ E E L+T
Sbjct: 34 IQFLYGEDGMDAVWIETQKLDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIR 93
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 94 EFRNVFDAEVQKLEADRFQLGTEIATTGD 122
[90][TOP]
>UniRef100_A7NVN7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera
RepID=A7NVN7_VITVI
Length = 1010
Score = 53.5 bits (127), Expect = 7e-06
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + D+ ++ + + P ++ E E L+T
Sbjct: 119 IQFLYGEDGMDAVWIETQKLDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIR 178
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 179 EFRNVFDAEVQKLEADRFQLGTEIATTGD 207
[91][TOP]
>UniRef100_B2W4S0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis
Pt-1C-BFP RepID=B2W4S0_PYRTR
Length = 1742
Score = 53.5 bits (127), Expect = 7e-06
Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-TRDMP--PDWLSAEEYEALRT 171
V+F+YGEDG+D IE Q + + A + AY++D T D P P W E +
Sbjct: 875 VEFIYGEDGLDGAYIEKQSMDTIMCSDADFEAAYKLDVLTTDQPEIPVW-KLEGSPMFQG 933
Query: 172 DPAVEQAMRDEMAQIKEDLRVLRE 243
D V++A+ +E QIK D VLR+
Sbjct: 934 DVDVQRALDEEFEQIKNDRAVLRD 957
[92][TOP]
>UniRef100_A1YIC4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chytriomyces hyalinus
RepID=A1YIC4_9FUNG
Length = 1003
Score = 53.5 bits (127), Expect = 7e-06
Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEA--LRTD 174
VQF YGEDGMD ++E Q F+ + + +K YR+D D S ++ A L D
Sbjct: 789 VQFCYGEDGMDGGKVEPQPFDLMNCNNRDFEKKYRVDIA-DPRYKLTSLDQKIAGDLLND 847
Query: 175 PAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
P + + E + E R+LRE+V +GD
Sbjct: 848 PGSQSLLDGEFKYLAEARRILREDVFPSGD 877
[93][TOP]
>UniRef100_A1YIB6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum
RepID=A1YIB6_9FUNG
Length = 1018
Score = 53.5 bits (127), Expect = 7e-06
Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRT--- 171
+QF YGEDGMD +E Q + ++ K +K+Y++D E+ L+
Sbjct: 802 IQFCYGEDGMDGCHVEKQTLDSIRMANDKFEKSYKVDVMDKEKGFKSGVLEFNILKDVEG 861
Query: 172 DPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ + + + +E Q+ +D RVLRE + T+GD
Sbjct: 862 NDSTQMMLDEEYRQLCDDRRVLREFIFTSGD 892
[94][TOP]
>UniRef100_Q9AXN1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Botryocladia
uvarioides RepID=Q9AXN1_9FLOR
Length = 1712
Score = 53.1 bits (126), Expect = 9e-06
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTT--------RDMPPDWLSAEEY 156
V+FLYGEDGMDA +E Q LK +L Y +D T R P +L E
Sbjct: 777 VEFLYGEDGMDATLLEDQTLRTLKMSDERLFDEYYLDPTDAKFGKDSRGRP--YLDWETC 834
Query: 157 EALRTDPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+++R D +R+E +I+ED +LR + +G+
Sbjct: 835 DSIRQDAQAHILLRNEFQRIREDRDLLRNFIAKSGE 870
[95][TOP]
>UniRef100_Q1L5Y7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Antirrhinum majus
RepID=Q1L5Y7_ANTMA
Length = 780
Score = 53.1 bits (126), Expect = 9e-06
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q E LK + + YR + + + P ++ +E E L+T
Sbjct: 559 IQFLYGEDGMDAVWIESQPLESLKLKKSDFNDMYRYEIDSSNWNPSYMLSEAVEDLKTIR 618
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ E+ +++ D L + T GD
Sbjct: 619 EIRSVFDAEVQKLEADRFQLGTGIATTGD 647
[96][TOP]
>UniRef100_B7SNX1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nicotiana tabacum
RepID=B7SNX1_TOBAC
Length = 1010
Score = 53.1 bits (126), Expect = 9e-06
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDK--AYRIDTTRDMPPDWLSAEEYEALRTD 174
+QFLYGEDGMDAV IE Q + LK + D AY ID + P ++ E E L+T
Sbjct: 801 IQFLYGEDGMDAVWIETQKLDSLKAKKSTFDDLYAYEIDDP-NWNPSYMLPEAIEDLKTI 859
Query: 175 PAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ E+ +++ D + L E+ GD
Sbjct: 860 REIRSVFDAEVQKLQADRKQLGTEIAVTGD 889
[97][TOP]
>UniRef100_B7SNW9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Illicium parviflorum
RepID=B7SNW9_ILLPA
Length = 1013
Score = 53.1 bits (126), Expect = 9e-06
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177
+QFLYGEDGMDAV IE Q + LK + + +R + D P ++ E + L+T
Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVFRYEIDNDNWNPSYMLPEHVKDLKTIR 863
Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
E+ +++ D L E+ T GD
Sbjct: 864 EFRNVFDAEVQKLEADRFQLGTEIATTGD 892
[98][TOP]
>UniRef100_B7G9I2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeodactylum
tricornutum CCAP 1055/1 RepID=B7G9I2_PHATR
Length = 1706
Score = 53.1 bits (126), Expect = 9e-06
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR------DMPPDWLSAEEYEA 162
VQFLYGEDGMDAV IE Q F+ L + +K + DT+ + +L + E
Sbjct: 810 VQFLYGEDGMDAVWIEKQNFDSLTLAKPEFNKRFLFDTSSPEFGHDEQGIPFLEPDVIEE 869
Query: 163 LRTDPAVEQAMRDEMAQIKEDLRVLR 240
R DP ++ + E+ ++ED +LR
Sbjct: 870 CRRDPDIQATLDQEIEILREDQAILR 895
[99][TOP]
>UniRef100_Q2PYQ8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Paraglomus occultum
RepID=Q2PYQ8_9GLOM
Length = 847
Score = 53.1 bits (126), Expect = 9e-06
Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 4/92 (4%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR--DMPPDWLSAEEYEALRTD 174
++F YGEDG D +E Q + L+ A +K Y ID + D+ P + ++ + D
Sbjct: 635 IRFCYGEDGTDGCYVESQTLDSLRLSDADFEKKYYIDLRKDPDLNPSLVDPRVWDRISDD 694
Query: 175 PA--VEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+ +Q + E +++ ED ++LRE + NGD
Sbjct: 695 GSDKYQQHLDQEYSKLLEDRKILREFIFPNGD 726
[100][TOP]
>UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36
RepID=B9WN64_CANDC
Length = 1735
Score = 53.1 bits (126), Expect = 9e-06
Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID--TTRDMPPDWLSAEEYEALRTD 174
+QF+YGEDG+D ++E Q + + ++ YRID T++M + L E + +R D
Sbjct: 864 IQFIYGEDGIDGTQVEKQSVDTIPGSDESFERRYRIDILDTKNMISESL-IESGKEIRGD 922
Query: 175 PAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264
+++ + +E Q+ +D + LRE NGD
Sbjct: 923 VQLQKILDEEYNQLLKDRKYLREVCFPNGD 952
[101][TOP]
>UniRef100_A7J591 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anaptychia palmatula
RepID=A7J591_9LECA
Length = 1020
Score = 53.1 bits (126), Expect = 9e-06
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMP-----PDWLSAEEYEAL 165
VQF+YGEDG+D IE Q + +K AK +K +R+D + P PD+L E+ +
Sbjct: 801 VQFVYGEDGLDGAHIEPQPIDIIKCSDAKFEKDFRVDLMEEDPKTSISPDFL--EQATEI 858
Query: 166 RTDPAVEQAMRDEMAQIKEDLRVLREE 246
+ V+Q + +E Q+K LR++
Sbjct: 859 AGNVQVQQHLDEEFEQLKAAREFLRKD 885
[102][TOP]
>UniRef100_A1YIC2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coelomomyces
stegomyiae RepID=A1YIC2_9FUNG
Length = 1014
Score = 53.1 bits (126), Expect = 9e-06
Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Frame = +1
Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-----TRDMPPDWLSAEEYEAL 165
+QF+YGEDGMDA+++E Q + L+ + ++ + YRID +PP + + +
Sbjct: 798 IQFVYGEDGMDAIQVEKQTLDSLRMNDSRFESKYRIDVMDIEGKAGLPPGCVEFGIQQEM 857
Query: 166 RTDPAVEQAMRDEMAQIKEDLRVLREEVLT 255
++ V++ + +E +Q+K+D LR+ LT
Sbjct: 858 QSID-VQKLLDEEFSQLKDDRACLRKIFLT 886