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[1][TOP] >UniRef100_A8IRZ2 DNA-directed RNA polymerase n=1 Tax=Chlamydomonas reinhardtii RepID=A8IRZ2_CHLRE Length = 1789 Score = 182 bits (461), Expect = 1e-44 Identities = 88/88 (100%), Positives = 88/88 (100%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA 180 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA Sbjct: 878 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA 937 Query: 181 VEQAMRDEMAQIKEDLRVLREEVLTNGD 264 VEQAMRDEMAQIKEDLRVLREEVLTNGD Sbjct: 938 VEQAMRDEMAQIKEDLRVLREEVLTNGD 965 [2][TOP] >UniRef100_Q8MX26 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cercomonas sp. ATCC 50319 RepID=Q8MX26_9EUKA Length = 1014 Score = 70.9 bits (172), Expect = 4e-11 Identities = 34/88 (38%), Positives = 53/88 (60%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA 180 +QF YGEDGMD V IE Q + LK D A+ K Y++D +R D++ AE E L P Sbjct: 798 IQFAYGEDGMDGVYIEKQKLDSLKMDNARFLKTYQLDVSRPEQLDFMDAEVREHLLRTPE 857 Query: 181 VEQAMRDEMAQIKEDLRVLREEVLTNGD 264 A+ E+ Q+++D ++LR+++ G+ Sbjct: 858 AHDALETELKQLRDDRQLLRDKIQPTGE 885 [3][TOP] >UniRef100_A9U396 DNA-directed RNA polymerase n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U396_PHYPA Length = 1742 Score = 65.5 bits (158), Expect = 2e-09 Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR-DMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMD+V IE Q + LK A+ ++ YR + R D PD++SAE E ++T Sbjct: 885 IQFLYGEDGMDSVWIESQKLDSLKMKKAEFNRVYRFEIDRDDWAPDYMSAEAAEDIKTIQ 944 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + E+++++ D R + E+ G+ Sbjct: 945 EIRNVFDAEVSKLEADRRQMGLEIAPTGE 973 [4][TOP] >UniRef100_C9SR21 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Verticillium albo-atrum VaMs.102 RepID=C9SR21_9PEZI Length = 1756 Score = 63.2 bits (152), Expect = 9e-09 Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 1/82 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEY-EALRTDP 177 +QFLYGEDG+DA+ IE Q ++L K D Y++D P+ L EY + DP Sbjct: 877 IQFLYGEDGLDAIYIEKQRMDFLNMSNKKFDDRYKLDVMDANKPEELDWLEYGNEIAGDP 936 Query: 178 AVEQAMRDEMAQIKEDLRVLRE 243 A +Q + +E + ED RV+RE Sbjct: 937 ASQQLLDEEYEALAEDRRVVRE 958 [5][TOP] >UniRef100_Q71ET5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nymphaea odorata RepID=Q71ET5_NYMOD Length = 1013 Score = 62.0 bits (149), Expect = 2e-08 Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK ++ DK ++ + + P +L + E L+T Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFKFEFDDENWDPSYLQPDFVEDLKTIK 863 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 ++ E+ +++ D R L E+ T GD Sbjct: 864 ELQDVFHAEVQKLETDRRQLATEIATTGD 892 [6][TOP] >UniRef100_UPI0000E12351 Os05g0151000 n=1 Tax=Oryza sativa Japonica Group RepID=UPI0000E12351 Length = 2085 Score = 61.2 bits (147), Expect = 3e-08 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDA+ IE Q + LK A+ D +R + + P++LS + E L+T Sbjct: 883 IQFLYGEDGMDAIWIESQKLDSLKMKKAEFDNVFRYELDDENWKPNYLSTQHAEDLKTIS 942 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + E+ +++ D L E+ T GD Sbjct: 943 EIRNVFEAEVQKLEADRFQLGTEIATTGD 971 [7][TOP] >UniRef100_Q5WMZ9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=Q5WMZ9_ORYSJ Length = 1741 Score = 61.2 bits (147), Expect = 3e-08 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDA+ IE Q + LK A+ D +R + + P++LS + E L+T Sbjct: 830 IQFLYGEDGMDAIWIESQKLDSLKMKKAEFDNVFRYELDDENWKPNYLSTQHAEDLKTIS 889 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + E+ +++ D L E+ T GD Sbjct: 890 EIRNVFEAEVQKLEADRFQLGTEIATTGD 918 [8][TOP] >UniRef100_Q0DKN9 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=Q0DKN9_ORYSJ Length = 1834 Score = 61.2 bits (147), Expect = 3e-08 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDA+ IE Q + LK A+ D +R + + P++LS + E L+T Sbjct: 883 IQFLYGEDGMDAIWIESQKLDSLKMKKAEFDNVFRYELDDENWKPNYLSTQHAEDLKTIS 942 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + E+ +++ D L E+ T GD Sbjct: 943 EIRNVFEAEVQKLEADRFQLGTEIATTGD 971 [9][TOP] >UniRef100_A4RMP1 DNA-directed RNA polymerase n=1 Tax=Magnaporthe grisea RepID=A4RMP1_MAGGR Length = 1757 Score = 60.5 bits (145), Expect = 6e-08 Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 1/82 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEY-EALRTDP 177 +QF+YGEDG+D + IE Q ++L K D Y++D P L+A EY + DP Sbjct: 875 IQFIYGEDGLDGMAIEKQKMDHLNISNGKFDGMYKLDLMTATRPRELNALEYGNEIFGDP 934 Query: 178 AVEQAMRDEMAQIKEDLRVLRE 243 AV+Q + +E IK D +++RE Sbjct: 935 AVQQLLDEEYDAIKADRQLIRE 956 [10][TOP] >UniRef100_Q9AXN0 DNA-directed RNA polymerase n=1 Tax=Glaucosphaera vacuolata RepID=Q9AXN0_9RHOD Length = 1746 Score = 59.7 bits (143), Expect = 1e-07 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 6/90 (6%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT------TRDMPPDWLSAEEYEA 162 VQFLYGEDGMD +E Q L + AKL++ + +D + +L+ E + Sbjct: 852 VQFLYGEDGMDGAMVEDQNLRTLSMNDAKLEQTFHLDPFDLDFGIGENRRSYLAQEVIDD 911 Query: 163 LRTDPAVEQAMRDEMAQIKEDLRVLREEVL 252 +R DP + +A+ DE AQIK D L+ E++ Sbjct: 912 VRNDPQLIKALEDEFAQIKLDRDRLQREII 941 [11][TOP] >UniRef100_Q2PYS6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Polychytrium aggregatum RepID=Q2PYS6_9FUNG Length = 1016 Score = 59.7 bits (143), Expect = 1e-07 Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 3/90 (3%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTT---RDMPPDWLSAEEYEALRT 171 +QF YGEDGMD ++E Q E L AK +KAYR+D T + P L E L + Sbjct: 805 IQFCYGEDGMDGAKVERQNLESLAMSDAKFEKAYRVDLTGGQYGLKPGVLDFRTQENLLS 864 Query: 172 DPAVEQAMRDEMAQIKEDLRVLREEVLTNG 261 D + + E Q+++D LR + +G Sbjct: 865 DGLTQNRLDQEFEQLRKDRETLRWTIFKDG 894 [12][TOP] >UniRef100_Q2PYR5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mortierella verticillata RepID=Q2PYR5_9FUNG Length = 1016 Score = 59.7 bits (143), Expect = 1e-07 Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 12/100 (12%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTT------RDMPPDW------LS 144 +QF YGEDGMDA +E Q + +K A +K YRID T ++ D+ Sbjct: 796 IQFCYGEDGMDACHVEKQPLDTVKMSNAAFEKKYRIDLTDKSKSFKNGTLDYNVFKQIAE 855 Query: 145 AEEYEALRTDPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 A+E A R +P ++ + E Q+ ED +LR + T GD Sbjct: 856 ADEEAAKRGEPDMQTLLEQEFKQLDEDRHLLRNYIFTEGD 895 [13][TOP] >UniRef100_Q1ACT9 RNA polymerase II largest subunit (Fragment) n=1 Tax=Iresine herbstii RepID=Q1ACT9_IREHE Length = 240 Score = 59.3 bits (142), Expect = 1e-07 Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + DK YR + D PD++ E + L+T Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKLEFDKTYRYEFDADNWEPDYMLKEHVDDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L ++ T GD Sbjct: 94 EFRNVFDAEVQKLEVDRCQLATDIATTGD 122 [14][TOP] >UniRef100_O04144 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spirogyra sp. RepID=O04144_9VIRI Length = 613 Score = 59.3 bits (142), Expect = 1e-07 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR-DMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q +K + + D YR + + D PD++ + + + Sbjct: 392 IQFLYGEDGMDAVWIESQSLPSMKMNKSTFDATYRYEIDQEDWSPDYMDPQFAKDAKIVA 451 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 Q M E+ Q+++D R L E+ GD Sbjct: 452 EFRQVMDAEVLQLEQDRRTLGLEIAPTGD 480 [15][TOP] >UniRef100_Q1ACS9 RNA polymerase II largest subunit (Fragment) n=1 Tax=Ruschia herrei RepID=Q1ACS9_9CARY Length = 240 Score = 58.9 bits (141), Expect = 2e-07 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK ++ DK +R + + PD++ E + L+T Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKTFRYEFDAENWEPDYMLKEHVDDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFRNVFDAEVQKLEADRFQLGTEIATTGD 122 [16][TOP] >UniRef100_Q71ET3 DNA-directed RNA polymerase (Fragment) n=1 Tax=Psilotum nudum RepID=Q71ET3_PSINU Length = 1013 Score = 58.5 bits (140), Expect = 2e-07 Identities = 31/89 (34%), Positives = 49/89 (55%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 ++FLYGEDGMDAV IE Q + +K + D+ Y + + + PD++ AE E L+T Sbjct: 804 IEFLYGEDGMDAVWIESQKLDSMKMKTKEFDRMYMFEIDSENWNPDYMLAEHVEDLKTIQ 863 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D R L E+ +GD Sbjct: 864 EFRNVFDAEVQKLEADRRQLCTEIAPSGD 892 [17][TOP] >UniRef100_Q2TUN8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Taxus canadensis RepID=Q2TUN8_TAXCA Length = 1013 Score = 58.5 bits (140), Expect = 2e-07 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + + YR + ++ P ++ E + L+T Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYRYEIDQENWNPSYMLPEHVDDLKTIR 863 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + E+ +++ D R L E+ T GD Sbjct: 864 EFQNVFDAELQKLESDRRQLGTEIATTGD 892 [18][TOP] >UniRef100_Q1ACU5 RNA polymerase II largest subunit (Fragment) n=1 Tax=Dionaea muscipula RepID=Q1ACU5_DIOMU Length = 240 Score = 58.5 bits (140), Expect = 2e-07 Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK ++ KAYR + + P ++ + E L++ P Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKSEFLKAYRFEYDDPNWNPKYIRPDYIEDLKSIP 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+++++ D +L ++ T GD Sbjct: 94 EFHDVFEAEISKLESDRLLLATQIATTGD 122 [19][TOP] >UniRef100_B8BQ02 DNA-directed RNA polymerase n=1 Tax=Thalassiosira pseudonana CCMP1335 RepID=B8BQ02_THAPS Length = 1627 Score = 58.2 bits (139), Expect = 3e-07 Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 6/86 (6%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTT------RDMPPDWLSAEEYEA 162 VQFLYGEDGMDAV IE Q F+ L + + D+ Y + + D +L AE E Sbjct: 872 VQFLYGEDGMDAVWIERQSFDSLTLNKREFDERYLLHSDDPDFGYDDQNIPFLEAEVIED 931 Query: 163 LRTDPAVEQAMRDEMAQIKEDLRVLR 240 R +P V+Q + EM +KED +LR Sbjct: 932 CRHNPEVQQMLDREMEVLKEDQAMLR 957 [20][TOP] >UniRef100_B7SNX5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Saruma henryi RepID=B7SNX5_SARHE Length = 1009 Score = 58.2 bits (139), Expect = 3e-07 Identities = 33/89 (37%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK A+ DK +R + + P ++ E E L+T Sbjct: 800 IQFLYGEDGMDAVWIESQKLDSLKMKKAEFDKVFRYEFDDANWNPSYMLPEHVEDLKTIR 859 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 860 EFRSVFDAEVQKLEADRYQLGTEITTTGD 888 [21][TOP] >UniRef100_B7SNX2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Papaver orientale RepID=B7SNX2_PAPOR Length = 1010 Score = 58.2 bits (139), Expect = 3e-07 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + DK YR + D P+++ ++ E L+ Sbjct: 801 IQFLYGEDGMDAVWIESQKLDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIR 860 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ ++ +D L E+ T GD Sbjct: 861 EFRHVFDAEVKKLADDRLQLGTEITTTGD 889 [22][TOP] >UniRef100_Q2PYP9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix sp. GE13 RepID=Q2PYP9_9FUNG Length = 813 Score = 58.2 bits (139), Expect = 3e-07 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 4/92 (4%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR---DMPPDWLSAEEYEAL-R 168 +QF YGEDGMD +E Q E ++ AK +K Y+ID T + P L E L + Sbjct: 601 IQFCYGEDGMDGTSVEKQQLESIRMSDAKFEKFYKIDLTDKDFGLKPKTLQFSILEDLAQ 660 Query: 169 TDPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 V++ + +E ++ED ++ RE + NGD Sbjct: 661 QSNVVQEKLDEEYKSLQEDRKLFREFIFKNGD 692 [23][TOP] >UniRef100_A1YIC6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Neocallimastix frontalis RepID=A1YIC6_NEOFR Length = 1004 Score = 58.2 bits (139), Expect = 3e-07 Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 4/92 (4%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR---DMPPDWLSAEEYEAL-R 168 +QF YGEDGMD +E Q E ++ AK +K Y+ID T + P L E L + Sbjct: 787 IQFCYGEDGMDGTSVEKQQLESIRMSDAKFEKFYKIDLTDKDFGLKPKTLQFSILEDLAQ 846 Query: 169 TDPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 V++ + +E ++ED ++ RE + NGD Sbjct: 847 QSNVVQEKLDEEYKSLQEDRKLFREFIFKNGD 878 [24][TOP] >UniRef100_Q71ET4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Amborella trichopoda RepID=Q71ET4_AMBTC Length = 1013 Score = 57.8 bits (138), Expect = 4e-07 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK A+ + Y+ + ++ P ++ E E L+T Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKRAEFENVYKYEIDQENWSPSYMLPEHVEDLKTIR 863 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + E+ +++ D L E+ T GD Sbjct: 864 EFQNVFDAEVQKLEADRHQLGTEITTTGD 892 [25][TOP] >UniRef100_Q1ACT4 RNA polymerase II largest subunit (Fragment) n=1 Tax=Platanus orientalis RepID=Q1ACT4_PLAOI Length = 240 Score = 57.8 bits (138), Expect = 4e-07 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK ++ DK +R + + P ++ E E L+T Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFRYEIDNENWNPSYMLPEHVEDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + E+ +++ D L E+ T GD Sbjct: 94 EFQNVFDAEVRKLEADRYQLGTEITTMGD 122 [26][TOP] >UniRef100_B7SNW8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Drimys winteri RepID=B7SNW8_DRIWI Length = 1010 Score = 57.8 bits (138), Expect = 4e-07 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177 +QFLYGEDGMD+V IE Q + LK A+ D +R + D P ++ E E L+T Sbjct: 801 IQFLYGEDGMDSVWIESQKLDSLKMKKAEFDNVFRYEIDNDNWNPSYMVPEHVEDLKTIR 860 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 861 EFRNVFDAEVQKLEADRYQLGSEIATTGD 889 [27][TOP] >UniRef100_Q6CBQ3 DNA-directed RNA polymerase n=1 Tax=Yarrowia lipolytica RepID=Q6CBQ3_YARLI Length = 1750 Score = 57.8 bits (138), Expect = 4e-07 Identities = 30/88 (34%), Positives = 48/88 (54%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA 180 +QF+YGEDG+D ++E Q + + ++ Y+ID L+ E + D Sbjct: 869 IQFVYGEDGLDGAQVEKQTVDTIPGSDESFERRYKIDLMNPKTKP-LNIESGNDIVGDVE 927 Query: 181 VEQAMRDEMAQIKEDLRVLREEVLTNGD 264 V++ + +E Q+ D R+LREEV TNGD Sbjct: 928 VQRVLDEEYNQLLTDRRLLREEVFTNGD 955 [28][TOP] >UniRef100_Q2PYR1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Spiromyces aspiralis RepID=Q2PYR1_9FUNG Length = 1022 Score = 57.8 bits (138), Expect = 4e-07 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 3/91 (3%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRI---DTTRDMPPDWLSAEEYEALRT 171 VQF YGEDGMD+ +EGQ +++ K + Y + D+ + P L + + Sbjct: 811 VQFTYGEDGMDSTHLEGQSVNLVRYSDKKFESTYFVDVMDSEKSFPSGTLEFSVLKNVEG 870 Query: 172 DPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + V++ + DE Q+KED +LR+ + +G+ Sbjct: 871 NDEVQRVLDDEYEQLKEDRHILRKFIARDGE 901 [29][TOP] >UniRef100_Q1L5Z5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rhododendron macrophyllum RepID=Q1L5Z5_RHOMC Length = 589 Score = 57.4 bits (137), Expect = 5e-07 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK ++ DK +R + + P ++ AE E L+T Sbjct: 391 IQFLYGEDGMDAVWIETQRLDSLKMKKSEFDKKFRYEIDDGNWNPSYMLAEHVEDLKTIR 450 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 451 EFRNVFDAEVQKLEADRLQLGTEIATTGD 479 [30][TOP] >UniRef100_Q1ACU8 RNA polymerase II largest subunit (Fragment) n=1 Tax=Buxus sempervirens RepID=Q1ACU8_BUXSE Length = 240 Score = 57.4 bits (137), Expect = 5e-07 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK A DK +R + + P ++ E E L+T Sbjct: 34 IQFLYGEDGMDAVWIEDQKLDSLKMKKADFDKVFRYEIDDENWSPSYMLPEHVEDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFRNVFDAEVQKLQADRFQLGTEIATTGD 122 [31][TOP] >UniRef100_Q1ACT5 RNA polymerase II largest subunit (Fragment) n=1 Tax=Platanus orientalis RepID=Q1ACT5_PLAOI Length = 240 Score = 57.4 bits (137), Expect = 5e-07 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK ++ DK +R + + P ++ E E L+T Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKSEFDKVFRYEIDNENWNPSYMLPEHVEDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFRNVFDAEVQKLEADRFQLGTEIATTGD 122 [32][TOP] >UniRef100_Q1ACT2 RNA polymerase II largest subunit (Fragment) n=1 Tax=Nepenthes ampullaria RepID=Q1ACT2_9CARY Length = 240 Score = 57.4 bits (137), Expect = 5e-07 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMD+V IE Q E LK ++ D YR + D P+++ + E L+T Sbjct: 34 IQFLYGEDGMDSVWIESQKLESLKIKKSEFDMVYRYELNDEDWNPNYMLPDHVEDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFRNVFDAEVQKLEADRFQLATEIATTGD 122 [33][TOP] >UniRef100_Q1ACS3 RNA polymerase II largest subunit (Fragment) n=1 Tax=Vitis piasezkii RepID=Q1ACS3_9MAGN Length = 240 Score = 57.4 bits (137), Expect = 5e-07 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q E LK + D+A+R + + P+++ E E L+T Sbjct: 34 IQFLYGEDGMDAVWIESQKLESLKMKGMEFDRAFRYEIDDENWNPNYMFREHAEDLKTIQ 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ + GD Sbjct: 94 EFRNVFDAEVQKLEADRNQLGTEIASTGD 122 [34][TOP] >UniRef100_A7R1R2 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7R1R2_VITVI Length = 429 Score = 57.4 bits (137), Expect = 5e-07 Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q E LK + D+A+R + + P+++ E E L+T Sbjct: 139 IQFLYGEDGMDAVWIESQKLESLKMKGMEFDRAFRYEIDDENWNPNYMFREHAEDLKTIQ 198 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ + GD Sbjct: 199 EFRNVFDAEVQKLEADRNQLGTEIASTGD 227 [35][TOP] >UniRef100_Q7SDN0 DNA-directed RNA polymerase n=1 Tax=Neurospora crassa RepID=Q7SDN0_NEUCR Length = 1752 Score = 57.4 bits (137), Expect = 5e-07 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 2/90 (2%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-TRDMPPDWLSAEEY-EALRTD 174 +QF+YGEDG+D + IE Q ++ DK YR+D ++ L A EY + L +D Sbjct: 878 IQFVYGEDGLDGIAIENQPVDHFTISNKAFDKRYRLDVMDEEVSSGELEALEYGKELASD 937 Query: 175 PAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 P V++ + E Q+ D +LRE T G+ Sbjct: 938 PTVQELLDQEYEQLSVDRHMLREIQRTKGN 967 [36][TOP] >UniRef100_P35084 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Dictyostelium discoideum RepID=RPB1_DICDI Length = 1727 Score = 57.4 bits (137), Expect = 5e-07 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR-DMPPDWLSAEEYEALRTDP 177 +QF YGEDG+D +E Q + L+ D +L++ YR + D W+ E +R D Sbjct: 873 IQFAYGEDGIDGCFVENQSIDSLRKDNTELERMYRHQVDKPDYGDGWMDPLVIEHVRNDS 932 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + E +IK D +LR E++ +G+ Sbjct: 933 LTRDTLEKEFERIKSDRSLLRNEIIPSGE 961 [37][TOP] >UniRef100_P18616 DNA-directed RNA polymerase II subunit RPB1 n=1 Tax=Arabidopsis thaliana RepID=RPB1_ARATH Length = 1840 Score = 57.4 bits (137), Expect = 5e-07 Identities = 32/89 (35%), Positives = 49/89 (55%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK ++ D+ ++ + + P +LS E E L+ Sbjct: 884 IQFLYGEDGMDAVWIESQKLDSLKMKKSEFDRTFKYEIDDENWNPTYLSDEHLEDLKGIR 943 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + E ++++ D L E+ TNGD Sbjct: 944 ELRDVFDAEYSKLETDRFQLGTEIATNGD 972 [38][TOP] >UniRef100_Q99368 DNA-directed RNA polymerase (Fragment) n=1 Tax=Glycine max RepID=Q99368_SOYBN Length = 977 Score = 57.0 bits (136), Expect = 6e-07 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDA+ IE Q + LK + D+ +R + + P+++ E E L+T Sbjct: 74 IQFLYGEDGMDAIWIETQKLDTLKMKKTEFDRVFRYEFDEENWKPNYMLQEPVEDLKTIR 133 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ +NGD Sbjct: 134 EFRNVFEAEVQKLEADRHQLAIEIASNGD 162 [39][TOP] >UniRef100_Q1ACV0 RNA polymerase II largest subunit (Fragment) n=1 Tax=Berberidopsis beckleri RepID=Q1ACV0_9MAGN Length = 240 Score = 57.0 bits (136), Expect = 6e-07 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-TRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + ++ +R + + P ++ E E L+T P Sbjct: 34 IQFLYGEDGMDAVWIEFQKLDSLKMKKSDFBRVFRYEIGDENWNPTFMLPEHVEGLKTIP 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFGNVFEAEIRKLEADRYQLGTEIATTGD 122 [40][TOP] >UniRef100_Q1ACU4 RNA polymerase II largest subunit (Fragment) n=1 Tax=Gunnera chilensis RepID=Q1ACU4_GUNCH Length = 240 Score = 57.0 bits (136), Expect = 6e-07 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK A+ DK ++ + + P ++ E E L+T Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKAEFDKVFKYEIDDENWNPSYMLPEHVEDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFRNVFDAEVQKLEADRFQLGTEIATTGD 122 [41][TOP] >UniRef100_Q1ACT1 RNA polymerase II largest subunit (Fragment) n=1 Tax=Quercus coccinea RepID=Q1ACT1_9ROSI Length = 240 Score = 57.0 bits (136), Expect = 6e-07 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMD+V IE Q E LK ++ +K +R + PD++ E E L+T Sbjct: 34 IQFLYGEDGMDSVWIESQKLESLKMKKSEFNKTFRYEFDDEHWNPDYMMQEHIEDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFRNVFDAEVQKLEADRFQLGTEIATTGD 122 [42][TOP] >UniRef100_Q1ACV3 RNA polymerase II largest subunit (Fragment) n=1 Tax=Acer palmatum RepID=Q1ACV3_ACEPM Length = 240 Score = 56.6 bits (135), Expect = 8e-07 Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q+ + LK + +K +R + +D P+++ E + L+T Sbjct: 34 IQFLYGEDGMDAVWIETQILDSLKIKKSDFNKTFRFEMDQDNWNPNYMLQEFIDBLKTIK 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + E+ +++ D L E+ T+GD Sbjct: 94 ELRDVFDAEVQKLEADRYQLATEIATSGD 122 [43][TOP] >UniRef100_Q71EU1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Zamia muricata RepID=Q71EU1_9SPER Length = 1013 Score = 56.2 bits (134), Expect = 1e-06 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + + YR + + P ++ E E L+T Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKRPEFENVYRYEIDNENWNPSYMLPEHVEDLKTIR 863 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + E+ +++ D R L E+ +GD Sbjct: 864 EFQNVFDAEVQKLEADRRQLGTEIAPSGD 892 [44][TOP] >UniRef100_Q2TUN9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Thuja occidentalis RepID=Q2TUN9_THUOC Length = 1013 Score = 56.2 bits (134), Expect = 1e-06 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + + YR + ++ P ++ E + L+T Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKRKEFENVYRYEIDQENWNPSYMLPEHVDDLKTIR 863 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + E+ +++ D R L E+ +GD Sbjct: 864 EFQNVFDAELQKLESDRRQLGTEIAPSGD 892 [45][TOP] >UniRef100_Q1ACU7 RNA polymerase II largest subunit (Fragment) n=1 Tax=Cissus tuberosa RepID=Q1ACU7_9MAGN Length = 240 Score = 56.2 bits (134), Expect = 1e-06 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK A+ D+ ++ + + P ++ E E L+T Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKAEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFRNVFDAEVQKLEADRYQLGTEIATTGD 122 [46][TOP] >UniRef100_Q1ACT3 RNA polymerase II largest subunit (Fragment) n=1 Tax=Nelumbo nucifera RepID=Q1ACT3_NELNU Length = 240 Score = 56.2 bits (134), Expect = 1e-06 Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK ++ DK +R + + P ++ E E L+T Sbjct: 34 IQFLYGEDGMDAVWIETQKLDSLKMRKSEFDKVFRYEIDDENWNPSYMLPEHVEDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFRNVFDAEVQKLEADRYQLGTEIATTGD 122 [47][TOP] >UniRef100_B7SNW5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Asparagus officinalis RepID=B7SNW5_ASPOF Length = 1009 Score = 56.2 bits (134), Expect = 1e-06 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + + YR + P ++ E E L+T P Sbjct: 800 IQFLYGEDGMDAVWIESQKLDSLKMKKKEFNNVYRYEIDDNQWDPSYMLPEHVEDLKTIP 859 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L ++ T GD Sbjct: 860 EFRNVFDAEVQKLEADRFQLGTDIATTGD 888 [48][TOP] >UniRef100_Q71EU0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Cycas revoluta RepID=Q71EU0_CYCRE Length = 1013 Score = 55.8 bits (133), Expect = 1e-06 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK ++ + YR + + P ++ E E L+T Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKRSEFENVYRYEIDNENWNPSYMLPEHVEDLKTIR 863 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + ++ +++ D R L E+ +GD Sbjct: 864 EFQNVFDAQVQKLEADRRQLGTEIAPSGD 892 [49][TOP] >UniRef100_Q71ET9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pinus nigra RepID=Q71ET9_9CONI Length = 1013 Score = 55.8 bits (133), Expect = 1e-06 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + + Y+ + ++ P ++ E E L+T Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVYKYELDQENWNPSYMLPEHVEDLKTIR 863 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + E+ +++ D R L E+ +GD Sbjct: 864 EFQNVFDAEVQKLESDRRQLGMEIAPSGD 892 [50][TOP] >UniRef100_Q1ACS5 RNA polymerase II largest subunit (Fragment) n=1 Tax=Tetracentron sinense RepID=Q1ACS5_9MAGN Length = 240 Score = 55.8 bits (133), Expect = 1e-06 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK ++ DK +R + + P ++ E E L+T Sbjct: 34 IQFLYGEDGMDAVWIETQKLDSLKMKKSEFDKVFRYEIDNENWNPSYMLPEHVEDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ ++ D L E+ T GD Sbjct: 94 EFRNVFDAEVQKLAADRCQLGTEIATTGD 122 [51][TOP] >UniRef100_Q2PYS1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum RepID=Q2PYS1_9FUNG Length = 1015 Score = 55.8 bits (133), Expect = 1e-06 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 3/91 (3%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT---TRDMPPDWLSAEEYEALRT 171 +QF YGEDGMD +E Q + ++ K +K+Y++D + P L + + Sbjct: 804 IQFCYGEDGMDGCFVEKQTLDSIRMSNEKFEKSYKVDVMDKEKGFKPGVLEFNILKDVEG 863 Query: 172 DPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + + + + +E Q+ +D RVLRE + T+GD Sbjct: 864 NDSTQMMLDEEYRQLCDDRRVLREFIFTSGD 894 [52][TOP] >UniRef100_A7J5B1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Teloschistes exilis RepID=A7J5B1_9LECA Length = 1003 Score = 55.8 bits (133), Expect = 1e-06 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 3/84 (3%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYE---ALRT 171 VQF+YGEDG+D IE Q + + AK +K +RID D P +SAE E + Sbjct: 785 VQFVYGEDGLDGAHIEPQRLDIIVCSDAKFEKDFRIDLMDDNPRTTVSAEFLEQATEIAA 844 Query: 172 DPAVEQAMRDEMAQIKEDLRVLRE 243 D V+Q + +E Q+K LR+ Sbjct: 845 DGKVQQVLDEEYEQLKAAREFLRK 868 [53][TOP] >UniRef100_A7J588 DNA-directed RNA polymerase (Fragment) n=1 Tax=Heterodermia vulgaris RepID=A7J588_9LECA Length = 996 Score = 55.8 bits (133), Expect = 1e-06 Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 3/84 (3%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYE---ALRT 171 VQF+YGEDG+D IE Q + + AK +K +RID D P +SAE E + Sbjct: 778 VQFVYGEDGLDGAHIEPQRLDIIVCSDAKFEKDFRIDLMDDNPRTTVSAEFLEQATEIAA 837 Query: 172 DPAVEQAMRDEMAQIKEDLRVLRE 243 D V+Q + +E Q+K LR+ Sbjct: 838 DGKVQQVLDEEYEQLKAAREFLRK 861 [54][TOP] >UniRef100_Q1ACU9 RNA polymerase II largest subunit (Fragment) n=1 Tax=Berberidopsis corallina RepID=Q1ACU9_9MAGN Length = 240 Score = 55.5 bits (132), Expect = 2e-06 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-TRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + D+ +R + + P ++ E E L+T Sbjct: 34 IQFLYGEDGMDAVGIEFQKLDSLKMKKSDFDRVFRYEIGDENWNPTYMLPEHVEGLKTIL 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFSNVFEAEIRKLEADRYQLGTEIATTGD 122 [55][TOP] >UniRef100_B7SNX4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pisum sativum RepID=B7SNX4_PEA Length = 1010 Score = 55.5 bits (132), Expect = 2e-06 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK D+A+R + + P ++ E E L+T Sbjct: 801 IQFLYGEDGMDAVWIETQKLDSLKMKKTDFDRAFRYEFDDENWKPTYMLEEPVEDLKTIR 860 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ ++ D L E+ T GD Sbjct: 861 EFRNVFEAEVQKLDADRFQLATEIATTGD 889 [56][TOP] >UniRef100_B9PMD7 DNA-directed RNA polymerase n=2 Tax=Toxoplasma gondii RepID=B9PMD7_TOXGO Length = 1892 Score = 55.5 bits (132), Expect = 2e-06 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177 +QFLYGEDGM +E Q E + D KL + YR D ++ WLS E + TD Sbjct: 890 LQFLYGEDGMSGEFVEDQTVELMTLDNEKLKRLYRHDVDQESYGKGWLSDELRNEILTDY 949 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 ++Q + +E I+ED L + +G+ Sbjct: 950 ELQQPLEEEFEAIREDKNRLCRHIFKDGE 978 [57][TOP] >UniRef100_B6KEC6 DNA-directed RNA polymerase n=1 Tax=Toxoplasma gondii ME49 RepID=B6KEC6_TOXGO Length = 1892 Score = 55.5 bits (132), Expect = 2e-06 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177 +QFLYGEDGM +E Q E + D KL + YR D ++ WLS E + TD Sbjct: 890 LQFLYGEDGMSGEFVEDQTVELMTLDNEKLKRLYRHDVDQESYGKGWLSDELRNEILTDY 949 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 ++Q + +E I+ED L + +G+ Sbjct: 950 ELQQPLEEEFEAIREDKNRLCRHIFKDGE 978 [58][TOP] >UniRef100_B2AA31 DNA-directed RNA polymerase n=1 Tax=Podospora anserina RepID=B2AA31_PODAN Length = 1748 Score = 55.5 bits (132), Expect = 2e-06 Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 2/83 (2%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEY-EALRTD 174 +QF+YGEDG+D + IE Q +++ + AK DK +R+D + L A EY + +D Sbjct: 877 IQFVYGEDGLDGIAIEKQKVDHMNLNNAKFDKRFRLDVMDETSSAAALDALEYGREMVSD 936 Query: 175 PAVEQAMRDEMAQIKEDLRVLRE 243 PAV+ + +E Q+ D + +RE Sbjct: 937 PAVQSLLDEEYEQLLADRKQVRE 959 [59][TOP] >UniRef100_P36594 DNA-directed RNA polymerase II subunit rpb1 n=1 Tax=Schizosaccharomyces pombe RepID=RPB1_SCHPO Length = 1752 Score = 55.5 bits (132), Expect = 2e-06 Identities = 29/88 (32%), Positives = 47/88 (53%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA 180 +QF YGEDG+DA +E Q+F+ L+ + +K YRID D LS ++ D + Sbjct: 870 IQFAYGEDGLDATLVEYQVFDSLRLSTKQFEKKYRIDLMEDRS---LSLYMENSIENDSS 926 Query: 181 VEQAMRDEMAQIKEDLRVLREEVLTNGD 264 V+ + +E Q+ D +L + + GD Sbjct: 927 VQDLLDEEYTQLVADRELLCKFIFPKGD 954 [60][TOP] >UniRef100_Q71ET8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Welwitschia mirabilis RepID=Q71ET8_WELMI Length = 1013 Score = 55.1 bits (131), Expect = 2e-06 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 1/88 (1%) Frame = +1 Query: 4 QFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDPA 180 QFLYGEDGMDAV IE Q + LK + D Y+ + ++ P ++ E E L+T Sbjct: 805 QFLYGEDGMDAVWIESQKLDSLKMKKREFDDVYKYELDQENWNPGYMLPEHIEDLKTIRE 864 Query: 181 VEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + E+ ++ D R L E+ +GD Sbjct: 865 FQNVCDAEVQHLENDRRQLGTEIAPSGD 892 [61][TOP] >UniRef100_Q71ET7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Zea mays RepID=Q71ET7_MAIZE Length = 1009 Score = 55.1 bits (131), Expect = 2e-06 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + D +R + + P+++ E + L+T Sbjct: 800 IQFLYGEDGMDAVWIESQKLDSLKMKKPEFDNVFRYELDDENWRPNYMLPEHVDDLKTIR 859 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 860 EFRNVFEAEVQKLEADRYQLGSEITTTGD 888 [62][TOP] >UniRef100_Q2TUN7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Podocarpus macrophyllus RepID=Q2TUN7_9CONI Length = 1013 Score = 55.1 bits (131), Expect = 2e-06 Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + + Y+ + ++ P ++ E E L+T Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKRKEFENVYKYEVDQENWNPIYMLPEHVEDLKTIR 863 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + E+ +++ D R L E+ +GD Sbjct: 864 EFQNVFDAEVQKLESDRRQLGTEIAPSGD 892 [63][TOP] >UniRef100_Q1ACV2 RNA polymerase II largest subunit (Fragment) n=1 Tax=Aextoxicon punctatum RepID=Q1ACV2_9MAGN Length = 240 Score = 55.1 bits (131), Expect = 2e-06 Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + D+ +R + + P ++ E E L+T Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKSDFDRVFRYEIDDENWNPSYMLPEHVEDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFRNVFDAEVQKLEADRFQLGTEIATTGD 122 [64][TOP] >UniRef100_Q1ACU1 RNA polymerase II largest subunit (Fragment) n=1 Tax=Hibbertia scandens RepID=Q1ACU1_9MAGN Length = 240 Score = 55.1 bits (131), Expect = 2e-06 Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK ++ D+ ++ + + P ++ +E + L+T Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKSEFDRVFKYEIDDENWNPSYMLSEHVDDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFRNVFDAEVQKLEADRYQLATEIATTGD 122 [65][TOP] >UniRef100_B9FZ51 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Japonica Group RepID=B9FZ51_ORYSJ Length = 1526 Score = 55.1 bits (131), Expect = 2e-06 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + D +R + + P+++ E + L+T Sbjct: 553 IQFLYGEDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIR 612 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 613 EFRNVFEAEVQKLEADRFQLGSEIATTGD 641 [66][TOP] >UniRef100_B8BAW1 DNA-directed RNA polymerase n=1 Tax=Oryza sativa Indica Group RepID=B8BAW1_ORYSI Length = 1449 Score = 55.1 bits (131), Expect = 2e-06 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + D +R + + P+++ E + L+T Sbjct: 852 IQFLYGEDGMDAVWIESQKLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIR 911 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 912 EFRNVFEAEVQKLEADRFQLGSEIATTGD 940 [67][TOP] >UniRef100_A7J592 DNA-directed RNA polymerase (Fragment) n=1 Tax=Pyxine subcinerea RepID=A7J592_9LECA Length = 1015 Score = 55.1 bits (131), Expect = 2e-06 Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 3/84 (3%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYE---ALRT 171 VQFLYGEDG+D IE Q+ + +K A+ +K +R+D D P +SAE E + Sbjct: 797 VQFLYGEDGLDGATIEPQLLDIIKCSDARFEKMFRVDLMEDDPRTSISAEFLEQATEVAG 856 Query: 172 DPAVEQAMRDEMAQIKEDLRVLRE 243 + V+Q + E Q+K LR+ Sbjct: 857 NIEVQQYLDQEFEQLKAAREFLRK 880 [68][TOP] >UniRef100_A5H2F1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Tornabea scutellifera RepID=A5H2F1_9LECA Length = 993 Score = 55.1 bits (131), Expect = 2e-06 Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 5/86 (5%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMP-----PDWLSAEEYEAL 165 VQF+YGEDG+D IE Q + + AK +K +R+D + P PD+L E+ + Sbjct: 776 VQFVYGEDGLDGAHIEPQKLDIIVCSEAKFEKDFRVDLMDNNPRTTISPDFL--EQATVI 833 Query: 166 RTDPAVEQAMRDEMAQIKEDLRVLRE 243 TD V++A+ +E Q+K LR+ Sbjct: 834 ATDQKVQKALDEEYEQLKAAREFLRK 859 [69][TOP] >UniRef100_Q71ET6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Magnolia x soulangeana RepID=Q71ET6_MAGSO Length = 1010 Score = 54.7 bits (130), Expect = 3e-06 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + D +R + + P ++ E E L+T Sbjct: 801 IQFLYGEDGMDAVWIESQKLDSLKMKKREFDNVFRYEFDNANWNPSYMLPEHVEDLKTIR 860 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 861 EFRNVFDAEVQKLEADRYQLGTEIATTGD 889 [70][TOP] >UniRef100_Q2TUN6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ginkgo biloba RepID=Q2TUN6_GINBI Length = 1013 Score = 54.7 bits (130), Expect = 3e-06 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + + Y+ + + P ++ A+ E L+T Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKRKEFENVYKYEIDNENWNPGYMLADHVEDLKTIR 863 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D R L E+ +GD Sbjct: 864 EFRNVFDAEVQKLEADRRQLGTEIAPSGD 892 [71][TOP] >UniRef100_B7SNX0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Liriodendron tulipifera RepID=B7SNX0_LIRTU Length = 1010 Score = 54.7 bits (130), Expect = 3e-06 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + D +R + + P ++ E E L+T Sbjct: 801 IQFLYGEDGMDAVWIESQKLDSLKMKKREFDNVFRYEFDNANWNPSYMLPEHVEDLKTIR 860 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 861 EFRNVFDAEVQKLEADRYQLGTEIATTGD 889 [72][TOP] >UniRef100_B7SNW7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Ceratophyllum demersum RepID=B7SNW7_CERDE Length = 1010 Score = 54.7 bits (130), Expect = 3e-06 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + D +R + + P ++ E E L+T Sbjct: 801 IQFLYGEDGMDAVWIESQKLDSLKMKKREFDNVFRYEFDNANWNPSYMLPEHVEDLKTIR 860 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 861 EFRNVFDAEVQKLEADRYQLGTEIATTGD 889 [73][TOP] >UniRef100_B7SNW6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Beta vulgaris RepID=B7SNW6_BETVU Length = 1012 Score = 54.7 bits (130), Expect = 3e-06 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + D +R + + P ++ E E L+T Sbjct: 803 IQFLYGEDGMDAVWIESQKLDSLKMKKREFDNVFRYEFDNANWNPSYMLPEHVEDLKTIR 862 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 863 EFRNVFDAEVQKLEADRYQLGTEIATTGD 891 [74][TOP] >UniRef100_A1YIA8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Taphrina deformans RepID=A1YIA8_9ASCO Length = 1001 Score = 54.7 bits (130), Expect = 3e-06 Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 3/91 (3%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTT---RDMPPDWLSAEEYEALRT 171 + F+YGEDG+DA +E Q+ + ++ A ++AYR+D T R +PP + E + Sbjct: 787 INFVYGEDGLDAASVEYQVLDTMRLSNAAFEEAYRVDVTDPDRTIPPSFF--EPGHDIDG 844 Query: 172 DPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 D V++ + E ++ ED R L+ + +GD Sbjct: 845 DFEVQKLLDQEFKELSEDRRDLQTLIFPSGD 875 [75][TOP] >UniRef100_Q1ACT8 RNA polymerase II largest subunit (Fragment) n=1 Tax=Kalanchoe tomentosa RepID=Q1ACT8_9MAGN Length = 240 Score = 54.3 bits (129), Expect = 4e-06 Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q E LK + +K +R + + P ++ E E L+T Sbjct: 34 IQFLYGEDGMDAVWIETQKLESLKMKKKEFNKVFRYEIDDPNWNPSYMLPEHVEDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFRNVFDAEVQKLEADRYQLGTEIATTGD 122 [76][TOP] >UniRef100_Q1ACS7 RNA polymerase II largest subunit (Fragment) n=1 Tax=Sedum burrito RepID=Q1ACS7_9MAGN Length = 240 Score = 54.3 bits (129), Expect = 4e-06 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q E LK + +K ++ + + P+++ +E E L+T Sbjct: 34 IQFLYGEDGMDAVWIETQKLESLKMKKKEFNKVFKYEIDDPNWNPNYMLSEHVEDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFRNVFDAEVQKLEADRYQLGTEIATTGD 122 [77][TOP] >UniRef100_C5YGY9 DNA-directed RNA polymerase n=1 Tax=Sorghum bicolor RepID=C5YGY9_SORBI Length = 1857 Score = 54.3 bits (129), Expect = 4e-06 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + D +R + + P+++ E + L+T Sbjct: 881 IQFLYGEDGMDAVWIESQKLDSLKMKKPEFDNLFRYELDDENWRPNYMLPEHVDDLKTIR 940 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 941 EFRNVFEAEVQKLEADRYQLGTEIATTGD 969 [78][TOP] >UniRef100_Q2PYS8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Rozella allomycis RepID=Q2PYS8_9FUNG Length = 809 Score = 54.3 bits (129), Expect = 4e-06 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 3/91 (3%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDM---PPDWLSAEEYEALRT 171 +QF YGEDGMDAV+IE Q + ++ + K + Y++D M + L E E + Sbjct: 600 IQFKYGEDGMDAVKIEKQSLDSMRLNNKKFEIKYKVDFLNPMYGISENVLQKEIIEEILA 659 Query: 172 DPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 P + A+ E Q+ ED VLR E+ +GD Sbjct: 660 TPVMLIALDKEYRQLTEDRNVLR-EIFKSGD 689 [79][TOP] >UniRef100_A1YIC0 DNA-directed RNA polymerase (Fragment) n=1 Tax=Catenaria anguillulae RepID=A1YIC0_9FUNG Length = 1020 Score = 54.3 bits (129), Expect = 4e-06 Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 5/93 (5%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYE-----AL 165 +QFLYGEDGMD R+E Q+ E L+ +K + +R+D T P L + E + Sbjct: 804 IQFLYGEDGMDGTRVESQVLEPLRMSDSKFETRFRVDVTEPDTPRGLRSASVEFGIMKEI 863 Query: 166 RTDPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 +T V+ + DE Q++ D R ++V GD Sbjct: 864 QT-AEVQDLLDDEFRQLQVD-RAQLQQVFKRGD 894 [80][TOP] >UniRef100_A1YIB5 DNA-directed RNA polymerase (Fragment) n=1 Tax=Mucor hiemalis RepID=A1YIB5_9FUNG Length = 1009 Score = 54.3 bits (129), Expect = 4e-06 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-TRDMPPDWLSAEEYEALRTDP 177 ++F YGEDGMDA+ +E Q F LK + + +K Y+ID + LS +++ Sbjct: 795 IEFCYGEDGMDALSVESQKFFSLKCNQEEFEKRYKIDVMNKGFKKGALSYNVLKSIEGSE 854 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + + E Q+ ED LR + NGD Sbjct: 855 TAQAYLDHEFYQLTEDRNKLRTNIFKNGD 883 [81][TOP] >UniRef100_Q1ACU6 RNA polymerase II largest subunit (Fragment) n=1 Tax=Dillenia suffruticosa RepID=Q1ACU6_9MAGN Length = 240 Score = 53.9 bits (128), Expect = 5e-06 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMD+V IE Q + LK ++ D+ ++ + + P ++ E E L+T Sbjct: 34 IQFLYGEDGMDSVWIESQKLDSLKMKKSEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFRNVFDAEVQKLEADRCQLATEIATTGD 122 [82][TOP] >UniRef100_Q1ACU3 RNA polymerase II largest subunit (Fragment) n=1 Tax=Hibbertia cuneiformis RepID=Q1ACU3_9MAGN Length = 240 Score = 53.9 bits (128), Expect = 5e-06 Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMD+V IE Q + LK ++ D+ ++ + + P ++ +E + L+T Sbjct: 34 IQFLYGEDGMDSVWIESQKLDSLKMKKSEFDRVFKYEIDDENWNPSYMLSEHVDDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFRNVFDAEVQKLEADRYQLATEIATTGD 122 [83][TOP] >UniRef100_Q1ACU2 RNA polymerase II largest subunit (Fragment) n=1 Tax=Hibbertia aspera RepID=Q1ACU2_9MAGN Length = 240 Score = 53.9 bits (128), Expect = 5e-06 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMD+V IE Q + LK ++ D+ ++ + + P ++ E E L+T Sbjct: 34 IQFLYGEDGMDSVWIESQKLDSLKMKKSEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFRNVFDAEVQKLEADRFQLATEIATTGD 122 [84][TOP] >UniRef100_B6JYP8 DNA-directed RNA polymerase n=1 Tax=Schizosaccharomyces japonicus yFS275 RepID=B6JYP8_SCHJY Length = 1748 Score = 53.9 bits (128), Expect = 5e-06 Identities = 28/88 (31%), Positives = 47/88 (53%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRTDPA 180 VQF YGEDG+DA +E Q+F+ L+ +K YRID D + ++ D A Sbjct: 870 VQFAYGEDGLDATIVEYQVFDALRLSNVDFEKKYRIDLVEDKK---ICLHMENSIEGDVA 926 Query: 181 VEQAMRDEMAQIKEDLRVLREEVLTNGD 264 +++ + +E +Q+ D + R + NG+ Sbjct: 927 MQELLDEEYSQLLTDRELCRGFIFPNGE 954 [85][TOP] >UniRef100_A5E6J4 DNA-directed RNA polymerase n=1 Tax=Lodderomyces elongisporus RepID=A5E6J4_LODEL Length = 1745 Score = 53.9 bits (128), Expect = 5e-06 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-TRDMPPDWLSAEEYEALRTDP 177 +QF+YGEDG+DA ++E Q + + ++ YRID ++ E E ++ D Sbjct: 858 IQFIYGEDGIDATQVEKQSVDTIPGSDESFERRYRIDVLEKNASISTNLLESGEEIQGDV 917 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 +++ + +E Q+ ED + LR+ V NGD Sbjct: 918 ELQKILDEEYNQLLEDRKYLRDVVFPNGD 946 [86][TOP] >UniRef100_UPI0001985649 PREDICTED: similar to NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA binding / DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=UPI0001985649 Length = 1848 Score = 53.5 bits (127), Expect = 7e-06 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + D+ ++ + + P ++ E E L+T Sbjct: 882 IQFLYGEDGMDAVWIETQKLDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIR 941 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 942 EFRNVFDAEVQKLEADRFQLGTEIATTGD 970 [87][TOP] >UniRef100_Q1ACV1 RNA polymerase II largest subunit (Fragment) n=1 Tax=Berberidopsis beckleri RepID=Q1ACV1_9MAGN Length = 240 Score = 53.5 bits (127), Expect = 7e-06 Identities = 31/89 (34%), Positives = 45/89 (50%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + D+ +R + P ++ E E L+T Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKSDFDRYFRYEIDDESWNPGYMLPEHVEDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFRNVFDAEVQKLEADRFQLGTEIATTGD 122 [88][TOP] >UniRef100_Q1ACT0 RNA polymerase II largest subunit (Fragment) n=2 Tax=Cucurbitaceae RepID=Q1ACT0_9ROSI Length = 240 Score = 53.5 bits (127), Expect = 7e-06 Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + ++ +R + + P+++ E E L+T Sbjct: 34 IQFLYGEDGMDAVWIESQKLDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T G+ Sbjct: 94 EFRNVFEAEVQKLEADRYQLGTEITTTGE 122 [89][TOP] >UniRef100_Q1ACS4 RNA polymerase II largest subunit (Fragment) n=1 Tax=Vitis piasezkii RepID=Q1ACS4_9MAGN Length = 240 Score = 53.5 bits (127), Expect = 7e-06 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + D+ ++ + + P ++ E E L+T Sbjct: 34 IQFLYGEDGMDAVWIETQKLDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIR 93 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 94 EFRNVFDAEVQKLEADRFQLGTEIATTGD 122 [90][TOP] >UniRef100_A7NVN7 DNA-directed RNA polymerase n=1 Tax=Vitis vinifera RepID=A7NVN7_VITVI Length = 1010 Score = 53.5 bits (127), Expect = 7e-06 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + D+ ++ + + P ++ E E L+T Sbjct: 119 IQFLYGEDGMDAVWIETQKLDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIR 178 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 179 EFRNVFDAEVQKLEADRFQLGTEIATTGD 207 [91][TOP] >UniRef100_B2W4S0 DNA-directed RNA polymerase n=1 Tax=Pyrenophora tritici-repentis Pt-1C-BFP RepID=B2W4S0_PYRTR Length = 1742 Score = 53.5 bits (127), Expect = 7e-06 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 3/84 (3%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-TRDMP--PDWLSAEEYEALRT 171 V+F+YGEDG+D IE Q + + A + AY++D T D P P W E + Sbjct: 875 VEFIYGEDGLDGAYIEKQSMDTIMCSDADFEAAYKLDVLTTDQPEIPVW-KLEGSPMFQG 933 Query: 172 DPAVEQAMRDEMAQIKEDLRVLRE 243 D V++A+ +E QIK D VLR+ Sbjct: 934 DVDVQRALDEEFEQIKNDRAVLRD 957 [92][TOP] >UniRef100_A1YIC4 DNA-directed RNA polymerase (Fragment) n=1 Tax=Chytriomyces hyalinus RepID=A1YIC4_9FUNG Length = 1003 Score = 53.5 bits (127), Expect = 7e-06 Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 2/90 (2%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEA--LRTD 174 VQF YGEDGMD ++E Q F+ + + +K YR+D D S ++ A L D Sbjct: 789 VQFCYGEDGMDGGKVEPQPFDLMNCNNRDFEKKYRVDIA-DPRYKLTSLDQKIAGDLLND 847 Query: 175 PAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 P + + E + E R+LRE+V +GD Sbjct: 848 PGSQSLLDGEFKYLAEARRILREDVFPSGD 877 [93][TOP] >UniRef100_A1YIB6 DNA-directed RNA polymerase (Fragment) n=1 Tax=Basidiobolus ranarum RepID=A1YIB6_9FUNG Length = 1018 Score = 53.5 bits (127), Expect = 7e-06 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 3/91 (3%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMPPDWLSAEEYEALRT--- 171 +QF YGEDGMD +E Q + ++ K +K+Y++D E+ L+ Sbjct: 802 IQFCYGEDGMDGCHVEKQTLDSIRMANDKFEKSYKVDVMDKEKGFKSGVLEFNILKDVEG 861 Query: 172 DPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + + + + +E Q+ +D RVLRE + T+GD Sbjct: 862 NDSTQMMLDEEYRQLCDDRRVLREFIFTSGD 892 [94][TOP] >UniRef100_Q9AXN1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Botryocladia uvarioides RepID=Q9AXN1_9FLOR Length = 1712 Score = 53.1 bits (126), Expect = 9e-06 Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 8/96 (8%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTT--------RDMPPDWLSAEEY 156 V+FLYGEDGMDA +E Q LK +L Y +D T R P +L E Sbjct: 777 VEFLYGEDGMDATLLEDQTLRTLKMSDERLFDEYYLDPTDAKFGKDSRGRP--YLDWETC 834 Query: 157 EALRTDPAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 +++R D +R+E +I+ED +LR + +G+ Sbjct: 835 DSIRQDAQAHILLRNEFQRIREDRDLLRNFIAKSGE 870 [95][TOP] >UniRef100_Q1L5Y7 DNA-directed RNA polymerase (Fragment) n=1 Tax=Antirrhinum majus RepID=Q1L5Y7_ANTMA Length = 780 Score = 53.1 bits (126), Expect = 9e-06 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID-TTRDMPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q E LK + + YR + + + P ++ +E E L+T Sbjct: 559 IQFLYGEDGMDAVWIESQPLESLKLKKSDFNDMYRYEIDSSNWNPSYMLSEAVEDLKTIR 618 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + E+ +++ D L + T GD Sbjct: 619 EIRSVFDAEVQKLEADRFQLGTGIATTGD 647 [96][TOP] >UniRef100_B7SNX1 DNA-directed RNA polymerase (Fragment) n=1 Tax=Nicotiana tabacum RepID=B7SNX1_TOBAC Length = 1010 Score = 53.1 bits (126), Expect = 9e-06 Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 2/90 (2%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDK--AYRIDTTRDMPPDWLSAEEYEALRTD 174 +QFLYGEDGMDAV IE Q + LK + D AY ID + P ++ E E L+T Sbjct: 801 IQFLYGEDGMDAVWIETQKLDSLKAKKSTFDDLYAYEIDDP-NWNPSYMLPEAIEDLKTI 859 Query: 175 PAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + E+ +++ D + L E+ GD Sbjct: 860 REIRSVFDAEVQKLQADRKQLGTEIAVTGD 889 [97][TOP] >UniRef100_B7SNW9 DNA-directed RNA polymerase (Fragment) n=1 Tax=Illicium parviflorum RepID=B7SNW9_ILLPA Length = 1013 Score = 53.1 bits (126), Expect = 9e-06 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 1/89 (1%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRD-MPPDWLSAEEYEALRTDP 177 +QFLYGEDGMDAV IE Q + LK + + +R + D P ++ E + L+T Sbjct: 804 IQFLYGEDGMDAVWIESQKLDSLKMKKKEFENVFRYEIDNDNWNPSYMLPEHVKDLKTIR 863 Query: 178 AVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 E+ +++ D L E+ T GD Sbjct: 864 EFRNVFDAEVQKLEADRFQLGTEIATTGD 892 [98][TOP] >UniRef100_B7G9I2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Phaeodactylum tricornutum CCAP 1055/1 RepID=B7G9I2_PHATR Length = 1706 Score = 53.1 bits (126), Expect = 9e-06 Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 6/86 (6%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR------DMPPDWLSAEEYEA 162 VQFLYGEDGMDAV IE Q F+ L + +K + DT+ + +L + E Sbjct: 810 VQFLYGEDGMDAVWIEKQNFDSLTLAKPEFNKRFLFDTSSPEFGHDEQGIPFLEPDVIEE 869 Query: 163 LRTDPAVEQAMRDEMAQIKEDLRVLR 240 R DP ++ + E+ ++ED +LR Sbjct: 870 CRRDPDIQATLDQEIEILREDQAILR 895 [99][TOP] >UniRef100_Q2PYQ8 DNA-directed RNA polymerase (Fragment) n=1 Tax=Paraglomus occultum RepID=Q2PYQ8_9GLOM Length = 847 Score = 53.1 bits (126), Expect = 9e-06 Identities = 28/92 (30%), Positives = 49/92 (53%), Gaps = 4/92 (4%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTR--DMPPDWLSAEEYEALRTD 174 ++F YGEDG D +E Q + L+ A +K Y ID + D+ P + ++ + D Sbjct: 635 IRFCYGEDGTDGCYVESQTLDSLRLSDADFEKKYYIDLRKDPDLNPSLVDPRVWDRISDD 694 Query: 175 PA--VEQAMRDEMAQIKEDLRVLREEVLTNGD 264 + +Q + E +++ ED ++LRE + NGD Sbjct: 695 GSDKYQQHLDQEYSKLLEDRKILREFIFPNGD 726 [100][TOP] >UniRef100_B9WN64 DNA-directed RNA polymerase n=1 Tax=Candida dubliniensis CD36 RepID=B9WN64_CANDC Length = 1735 Score = 53.1 bits (126), Expect = 9e-06 Identities = 29/90 (32%), Positives = 51/90 (56%), Gaps = 2/90 (2%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRID--TTRDMPPDWLSAEEYEALRTD 174 +QF+YGEDG+D ++E Q + + ++ YRID T++M + L E + +R D Sbjct: 864 IQFIYGEDGIDGTQVEKQSVDTIPGSDESFERRYRIDILDTKNMISESL-IESGKEIRGD 922 Query: 175 PAVEQAMRDEMAQIKEDLRVLREEVLTNGD 264 +++ + +E Q+ +D + LRE NGD Sbjct: 923 VQLQKILDEEYNQLLKDRKYLREVCFPNGD 952 [101][TOP] >UniRef100_A7J591 DNA-directed RNA polymerase (Fragment) n=1 Tax=Anaptychia palmatula RepID=A7J591_9LECA Length = 1020 Score = 53.1 bits (126), Expect = 9e-06 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 5/87 (5%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDTTRDMP-----PDWLSAEEYEAL 165 VQF+YGEDG+D IE Q + +K AK +K +R+D + P PD+L E+ + Sbjct: 801 VQFVYGEDGLDGAHIEPQPIDIIKCSDAKFEKDFRVDLMEEDPKTSISPDFL--EQATEI 858 Query: 166 RTDPAVEQAMRDEMAQIKEDLRVLREE 246 + V+Q + +E Q+K LR++ Sbjct: 859 AGNVQVQQHLDEEFEQLKAAREFLRKD 885 [102][TOP] >UniRef100_A1YIC2 DNA-directed RNA polymerase (Fragment) n=1 Tax=Coelomomyces stegomyiae RepID=A1YIC2_9FUNG Length = 1014 Score = 53.1 bits (126), Expect = 9e-06 Identities = 28/90 (31%), Positives = 53/90 (58%), Gaps = 5/90 (5%) Frame = +1 Query: 1 VQFLYGEDGMDAVRIEGQMFEYLKWDPAKLDKAYRIDT-----TRDMPPDWLSAEEYEAL 165 +QF+YGEDGMDA+++E Q + L+ + ++ + YRID +PP + + + Sbjct: 798 IQFVYGEDGMDAIQVEKQTLDSLRMNDSRFESKYRIDVMDIEGKAGLPPGCVEFGIQQEM 857 Query: 166 RTDPAVEQAMRDEMAQIKEDLRVLREEVLT 255 ++ V++ + +E +Q+K+D LR+ LT Sbjct: 858 QSID-VQKLLDEEFSQLKDDRACLRKIFLT 886