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[1][TOP] >UniRef100_P08475 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Chlamydomonas reinhardtii RepID=RBS2_CHLRE Length = 185 Score = 327 bits (838), Expect = 2e-88 Identities = 161/161 (100%), Positives = 161/161 (100%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 186 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF Sbjct: 1 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 60 Query: 187 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 366 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM Sbjct: 61 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 120 Query: 367 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV Sbjct: 121 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 161 [2][TOP] >UniRef100_P00873 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=2 Tax=Chlamydomonas reinhardtii RepID=RBS1_CHLRE Length = 185 Score = 325 bits (832), Expect = 1e-87 Identities = 159/161 (98%), Positives = 161/161 (100%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 186 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF Sbjct: 1 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 60 Query: 187 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 366 SYLPPL+DEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNESAIRFGSVSCLYYDNRYWTM Sbjct: 61 SYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTM 120 Query: 367 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV Sbjct: 121 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 161 [3][TOP] >UniRef100_Q84U90 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox carteri RepID=Q84U90_VOLCA Length = 185 Score = 310 bits (794), Expect = 3e-83 Identities = 148/161 (91%), Positives = 156/161 (96%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 186 MAA++AKSSV+A VARPARSSVRP+A LKPAVKAAPVAAPAQAN+MMVWTPVNNKMFETF Sbjct: 1 MAAIVAKSSVAAVVARPARSSVRPVAGLKPAVKAAPVAAPAQANKMMVWTPVNNKMFETF 60 Query: 187 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 366 SYLPPL+DEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNES +RFG VSCLYYDNRYWTM Sbjct: 61 SYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRFGPVSCLYYDNRYWTM 120 Query: 367 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDN KQV Sbjct: 121 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNVKQV 161 [4][TOP] >UniRef100_Q84U92 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox carteri RepID=Q84U92_VOLCA Length = 185 Score = 307 bits (786), Expect = 3e-82 Identities = 145/161 (90%), Positives = 155/161 (96%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 186 MAA++AKSSV+ AV RPARSSVRP+A LKPA+KAAPVA+PAQAN+MMVWTPVNNKMFETF Sbjct: 1 MAAIVAKSSVATAVVRPARSSVRPVAVLKPAIKAAPVASPAQANKMMVWTPVNNKMFETF 60 Query: 187 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 366 SYLPPL+DEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNES +RFG VSCLYYDNRYWTM Sbjct: 61 SYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRFGPVSCLYYDNRYWTM 120 Query: 367 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDN KQV Sbjct: 121 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNVKQV 161 [5][TOP] >UniRef100_Q84U91 Ribulose bisphosphate carboxylase small chain n=1 Tax=Volvox carteri RepID=Q84U91_VOLCA Length = 185 Score = 303 bits (777), Expect = 3e-81 Identities = 145/161 (90%), Positives = 152/161 (94%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 186 MAAVIAKSSV+ AVARPARS VRP+A LKP+V+A PVA P QAN+MMVWTPVNNKMFETF Sbjct: 1 MAAVIAKSSVATAVARPARSGVRPVAVLKPSVRATPVATPTQANKMMVWTPVNNKMFETF 60 Query: 187 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 366 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAE+DKAYVSNES +RFG VSCLYYDNRYWTM Sbjct: 61 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESTVRFGPVSCLYYDNRYWTM 120 Query: 367 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDN KQV Sbjct: 121 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNVKQV 161 [6][TOP] >UniRef100_A8JGP8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas reinhardtii RepID=A8JGP8_CHLRE Length = 188 Score = 217 bits (553), Expect(2) = 5e-80 Identities = 110/110 (100%), Positives = 110/110 (100%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 186 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF Sbjct: 1 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 60 Query: 187 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 336 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC Sbjct: 61 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 110 Score = 104 bits (259), Expect(2) = 5e-80 Identities = 48/48 (100%), Positives = 48/48 (100%) Frame = +3 Query: 345 RQPLLDHVEAAHVRLPRPHAGAARDRRLHQGLPRCLRAPGGLRQPEAG 488 RQPLLDHVEAAHVRLPRPHAGAARDRRLHQGLPRCLRAPGGLRQPEAG Sbjct: 111 RQPLLDHVEAAHVRLPRPHAGAARDRRLHQGLPRCLRAPGGLRQPEAG 158 [7][TOP] >UniRef100_A8JGP5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas reinhardtii RepID=A8JGP5_CHLRE Length = 139 Score = 245 bits (626), Expect = 1e-63 Identities = 115/115 (100%), Positives = 115/115 (100%) Frame = +1 Query: 145 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 324 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG Sbjct: 1 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 60 Query: 325 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV Sbjct: 61 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 115 [8][TOP] >UniRef100_Q5VBK1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Dunaliella tertiolecta RepID=Q5VBK1_DUNTE Length = 189 Score = 235 bits (600), Expect = 1e-60 Identities = 111/162 (68%), Positives = 137/162 (84%), Gaps = 1/162 (0%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPA-QANQMMVWTPVNNKMFET 183 MAA++AKS+ A +A+ +R++ + A+LKPAV+AAP A PA +ANQMMVW P+NNK FET Sbjct: 1 MAALLAKSASVAPMAKASRTATKVQASLKPAVRAAPKAQPAVRANQMMVWNPINNKQFET 60 Query: 184 FSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWT 363 FSYLPPL+ +QIA QVDYIV NGW PCLEFAE ++AYVS++SA+RFG+VS YYDNRYWT Sbjct: 61 FSYLPPLTADQIAKQVDYIVNNGWTPCLEFAEQNQAYVSSDSAVRFGAVSANYYDNRYWT 120 Query: 364 MWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 MWKLPMFGC DP QVL EI C++AFP++Y RLVAFDN+KQV Sbjct: 121 MWKLPMFGCTDPSQVLSEINKCSRAFPESYQRLVAFDNKKQV 162 [9][TOP] >UniRef100_Q5VBK0 Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit n=1 Tax=Dunaliella tertiolecta RepID=Q5VBK0_DUNTE Length = 188 Score = 226 bits (577), Expect = 5e-58 Identities = 113/163 (69%), Positives = 135/163 (82%), Gaps = 2/163 (1%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVA-APA-QANQMMVWTPVNNKMFE 180 MA++IAKS+ A VA +R+S + A+LKPAV+A P A APA +ANQMMVW P+NNK FE Sbjct: 1 MASLIAKSASVAPVA--SRTSTKVQASLKPAVRAVPKAQAPAVRANQMMVWQPINNKQFE 58 Query: 181 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 360 TFSYLPPL+ +QIA QVDYIV NGW PCLEFAE +AYVS++SA+RFG+VS YYDNRYW Sbjct: 59 TFSYLPPLTADQIARQVDYIVENGWTPCLEFAEEGQAYVSSDSAVRFGAVSANYYDNRYW 118 Query: 361 TMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 TMWKLPMFGC DP QVL EI C++AFP++Y RLVAFDN+KQV Sbjct: 119 TMWKLPMFGCTDPSQVLSEINKCSRAFPNSYQRLVAFDNKKQV 161 [10][TOP] >UniRef100_Q5XR40 Ribulose bisphosphate carboxylase small chain n=1 Tax=Dunaliella salina RepID=Q5XR40_DUNSA Length = 190 Score = 214 bits (545), Expect = 2e-54 Identities = 113/165 (68%), Positives = 129/165 (78%), Gaps = 4/165 (2%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARP-ARSSVRPMAALKPAV-KAAPVA-APA-QANQMMVWTPVNNKM 174 MAA+IAK+ AVA P +R S + A+LKPAV + AP A APA + NQMMVW PVNNK Sbjct: 1 MAALIAKTC--PAVATPISRGSTKVQASLKPAVTRPAPKAQAPAVRTNQMMVWRPVNNKQ 58 Query: 175 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 354 FETFSYLPPL+ +QIA QVDYIV NGWIPCLEF+E AYV+N + RFG VS YYDNR Sbjct: 59 FETFSYLPPLTADQIARQVDYIVGNGWIPCLEFSEESYAYVANTNTARFGPVSNNYYDNR 118 Query: 355 YWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YWTMWKLPMFGC DP QVL EI C++AFP+AY RLVAFDN+KQV Sbjct: 119 YWTMWKLPMFGCTDPAQVLMEIQKCSRAFPEAYQRLVAFDNKKQV 163 [11][TOP] >UniRef100_C7FF11 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlorella pyrenoidosa RepID=C7FF11_CHLPY Length = 184 Score = 204 bits (520), Expect = 2e-51 Identities = 102/161 (63%), Positives = 118/161 (73%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 186 MA+ I+ S V A VA RS ++P AV + + + MMVWTPVNNK FETF Sbjct: 1 MASTISASLVKAPVATTQRSVLKPAGKTFKAVTVSN-GNVQKTSAMMVWTPVNNKFFETF 59 Query: 187 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 366 SYLPPLS +QIA QVDYIV NGW PCLEFA+ D AYVSN+S +RFG+VS Y DNRYWTM Sbjct: 60 SYLPPLSGDQIARQVDYIVLNGWTPCLEFADPDCAYVSNDSCVRFGNVSVGYQDNRYWTM 119 Query: 367 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 WKLPMFGC DP QVL+EI C +AFPDAY+RLVAFD +QV Sbjct: 120 WKLPMFGCTDPSQVLKEISNCERAFPDAYIRLVAFDAIRQV 160 [12][TOP] >UniRef100_P16133 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS5_ACECL Length = 184 Score = 197 bits (501), Expect = 3e-49 Identities = 98/161 (60%), Positives = 114/161 (70%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 186 MAA + ++ + ARSS P A A+ VA ++ +MMVW P NNKMFETF Sbjct: 1 MAAAMMNKTIVVSKDGCARSSSIPKVATNKMGFASAVAMK-KSREMMVWQPFNNKMFETF 59 Query: 187 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 366 SYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTM Sbjct: 60 SYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTM 119 Query: 367 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 WKLPMFGC D QVL EI ACTKAFPDAY+RLV FD +QV Sbjct: 120 WKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQV 160 [13][TOP] >UniRef100_C7FF10 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlorella pyrenoidosa RepID=C7FF10_CHLPY Length = 181 Score = 194 bits (493), Expect = 3e-48 Identities = 91/157 (57%), Positives = 112/157 (71%), Gaps = 5/157 (3%) Frame = +1 Query: 34 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQAN-----QMMVWTPVNNKMFETFSYLP 198 ++ +A A +VRP+A LK A + + + M VWTP+NNKMFETFSYLP Sbjct: 1 MACTMAAIAPVAVRPVAGLKQAKNTSAARTVSNGSIQKTTAMQVWTPINNKMFETFSYLP 60 Query: 199 PLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLP 378 PL+D +I+ QVDYIV NGW PCLEFAES AY SNE+ IR + +CLYYDNRYWTMWKLP Sbjct: 61 PLTDAEISRQVDYIVNNGWTPCLEFAESASAYASNENCIRMNNTTCLYYDNRYWTMWKLP 120 Query: 379 MFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 MFGC D QVL+E+ C +AFPDAY+R+V FD +QV Sbjct: 121 MFGCTDGHQVLQEVANCRRAFPDAYIRMVGFDPIRQV 157 [14][TOP] >UniRef100_P16131 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS3_ACECL Length = 183 Score = 192 bits (488), Expect = 1e-47 Identities = 89/124 (71%), Positives = 97/124 (78%) Frame = +1 Query: 118 AAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYV 297 AA + MMVW P NNKMFETFSYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY Sbjct: 36 AAVQKCRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYA 95 Query: 298 SNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDN 477 NE+ IR G VS Y DNRYWTMWKLPMFGC D QVL EI ACTKAFPDAY+RLV FD Sbjct: 96 GNENCIRMGPVSSTYQDNRYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDA 155 Query: 478 QKQV 489 +QV Sbjct: 156 NRQV 159 [15][TOP] >UniRef100_P17537 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Chlamydomonas moewusii RepID=RBS_CHLMO Length = 168 Score = 191 bits (484), Expect = 3e-47 Identities = 93/148 (62%), Positives = 111/148 (75%) Frame = +1 Query: 46 VARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAA 225 +A A SV AA + +AAPVAAPA A + VW PVNNK +ETFSYLPPL++++I Sbjct: 1 MASIAAKSVSLRAATR---RAAPVAAPADA-RFKVWQPVNNKQYETFSYLPPLTNQKIGR 56 Query: 226 QVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQ 405 QVDYI+ NGW PCLEFA+ ++VSN +A+R VS YYDNRYWTMWKLPMFGC DP Q Sbjct: 57 QVDYIINNGWTPCLEFADPSTSFVSNANAVRLQGVSAGYYDNRYWTMWKLPMFGCTDPSQ 116 Query: 406 VLREIVACTKAFPDAYVRLVAFDNQKQV 489 VLRE+ AC AFP+ Y+RLVAFDN KQV Sbjct: 117 VLREVSACQVAFPNVYIRLVAFDNVKQV 144 [16][TOP] >UniRef100_Q30CC3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Haematococcus pluvialis RepID=Q30CC3_HAEPL Length = 141 Score = 190 bits (483), Expect = 4e-47 Identities = 83/116 (71%), Positives = 97/116 (83%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 MMVW P+NNK +ETFSYLPPL+ +QIA QVDY+V NGWIPCLEFA++ +AYVSN S +RF Sbjct: 1 MMVWQPINNKQYETFSYLPPLTSDQIARQVDYVVGNGWIPCLEFADASQAYVSNASTVRF 60 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 GSVS YYDNRYWT+WKLPMFGC DP VL EI +KAFP AY+R+VAFDN +QV Sbjct: 61 GSVSACYYDNRYWTLWKLPMFGCTDPSAVLTEISRASKAFPQAYIRMVAFDNVRQV 116 [17][TOP] >UniRef100_P16132 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS4_ACECL Length = 182 Score = 190 bits (483), Expect = 4e-47 Identities = 91/146 (62%), Positives = 106/146 (72%), Gaps = 2/146 (1%) Frame = +1 Query: 58 ARSSVRPMAALKPAV--KAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQV 231 ++ +P A K ++ K A + +MMVW P NNKMFETFSYLPPL+DEQI+ QV Sbjct: 13 SKGCTKPSAVPKVSINRKGFLNTAMNKKREMMVWQPFNNKMFETFSYLPPLTDEQISKQV 72 Query: 232 DYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVL 411 DYI+AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTMWKLPMFGC D QVL Sbjct: 73 DYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVL 132 Query: 412 REIVACTKAFPDAYVRLVAFDNQKQV 489 EI ACTKAFPDAY+RLV FD +QV Sbjct: 133 SEIQACTKAFPDAYIRLVCFDANRQV 158 [18][TOP] >UniRef100_Q9XFT5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chlamydomonas sp. HS-5 RepID=Q9XFT5_9CHLO Length = 158 Score = 190 bits (482), Expect = 5e-47 Identities = 87/129 (67%), Positives = 104/129 (80%) Frame = +1 Query: 103 KAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAES 282 KA PVAAP +A+ VW PVNNK +ETFSYLP L+ EQIA QVDY++ NG+ PCLEFA++ Sbjct: 13 KATPVAAP-RASAFKVWQPVNNKQYETFSYLPALTSEQIARQVDYVIRNGYTPCLEFADA 71 Query: 283 DKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRL 462 ++VSNE+ +RF VS YYDNRYWTMWKLPMFGC D QVL+E+ CT+AFP+AYVRL Sbjct: 72 AYSFVSNENTVRFSGVSANYYDNRYWTMWKLPMFGCTDAAQVLKEVALCTRAFPNAYVRL 131 Query: 463 VAFDNQKQV 489 VAFDN KQV Sbjct: 132 VAFDNTKQV 140 [19][TOP] >UniRef100_Q38692 Ribulose bisphosphate carboxylase small chain 6, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS6_ACECL Length = 182 Score = 189 bits (481), Expect = 6e-47 Identities = 93/162 (57%), Positives = 115/162 (70%), Gaps = 2/162 (1%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPV--AAPAQANQMMVWTPVNNKMFET 183 A +++K+ +S+ + +P+A K ++ V +A + +MMVW P NNKMFET Sbjct: 3 ATMMSKTIISS------KQCSKPIAPPKVSINKGFVNTSAAIKNREMMVWQPFNNKMFET 56 Query: 184 FSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWT 363 FSYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY NE+ I G V+ Y DNRYWT Sbjct: 57 FSYLPPLTDEQISKQVDYILANAWTPCLEFAASDQAYAGNENCITMGPVASTYQDNRYWT 116 Query: 364 MWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 MWKLPMFGC D QVL EI ACTKAFPDAY+RLV FD +QV Sbjct: 117 MWKLPMFGCTDGSQVLTEIQACTKAFPDAYIRLVCFDANRQV 158 [20][TOP] >UniRef100_P16136 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Acetabularia acetabulum RepID=RBS3_ACEAT Length = 182 Score = 188 bits (478), Expect = 1e-46 Identities = 96/163 (58%), Positives = 111/163 (68%), Gaps = 2/163 (1%) Frame = +1 Query: 7 MAAVIAKSSV--SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFE 180 MA+++ SV S A+P S P L A +A + MMVW P NNKMFE Sbjct: 1 MASIMMNKSVVLSKECAKPLAS---PKVTLNKRGFATTIATKNRG--MMVWQPFNNKMFE 55 Query: 181 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 360 TFS+LPPL+DEQI+ QVDYI+ N W PCLEFA SD+AY NE+ IR G V+ Y DNRYW Sbjct: 56 TFSFLPPLTDEQISKQVDYILINSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYW 115 Query: 361 TMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 TMWKLPMFGC D QVL EI ACTKAFPDAY+RLV FD +QV Sbjct: 116 TMWKLPMFGCTDASQVLSEIQACTKAFPDAYIRLVCFDANRQV 158 [21][TOP] >UniRef100_P16134 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=2 Tax=Acetabularia acetabulum RepID=RBS1_ACEAT Length = 182 Score = 188 bits (478), Expect = 1e-46 Identities = 95/163 (58%), Positives = 112/163 (68%), Gaps = 2/163 (1%) Frame = +1 Query: 7 MAAVIAKSSV--SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFE 180 MA+++ SV S A+P + P L A +A + +MMVW P NNKMFE Sbjct: 1 MASIMMNKSVVLSKECAKPLAT---PKVTLNKRGFATTIAT--KNREMMVWQPFNNKMFE 55 Query: 181 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 360 TFS+LPPL+DEQI+ QVDYI+ N W PCLEFA SD+AY NE+ IR G V+ Y DNRYW Sbjct: 56 TFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYW 115 Query: 361 TMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 TMWKLPMFGC D QVL EI ACTKAFPDAY+RLV FD +QV Sbjct: 116 TMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQV 158 [22][TOP] >UniRef100_P16138 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Acetabularia acetabulum RepID=RBS5_ACEAT Length = 183 Score = 187 bits (474), Expect = 4e-46 Identities = 89/142 (62%), Positives = 102/142 (71%), Gaps = 3/142 (2%) Frame = +1 Query: 73 RPMAALKPAVKAAPVAAPAQANQ---MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIV 243 +P A K + A + N+ MMVW P NNKMFETFS+LPPL+DEQI+ QVDYI+ Sbjct: 18 KPAAVPKVVMSKGGFARTSAVNKNRDMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYIL 77 Query: 244 ANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIV 423 AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTMWKLPMFGC D QVL EI Sbjct: 78 ANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTMWKLPMFGCTDGSQVLSEIQ 137 Query: 424 ACTKAFPDAYVRLVAFDNQKQV 489 ACT AFPDAY+RLV FD +QV Sbjct: 138 ACTNAFPDAYIRLVCFDANRQV 159 [23][TOP] >UniRef100_Q38693 Ribulose bisphosphate carboxylase small chain 7, chloroplastic n=1 Tax=Acetabularia peniculus RepID=RBS7_ACECL Length = 183 Score = 186 bits (473), Expect = 5e-46 Identities = 84/116 (72%), Positives = 94/116 (81%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 MMVW P NNKMFETFSYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY NE+ IR Sbjct: 44 MMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRM 103 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G V+ Y DNRYWTMWKLPMFGC D QVL ++ ACTKAFPDAY+RLV FD +QV Sbjct: 104 GPVASTYQDNRYWTMWKLPMFGCTDGSQVLSDMQACTKAFPDAYIRLVCFDANRQV 159 [24][TOP] >UniRef100_P16137 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Acetabularia acetabulum RepID=RBS4_ACEAT Length = 182 Score = 186 bits (473), Expect = 5e-46 Identities = 96/161 (59%), Positives = 112/161 (69%), Gaps = 1/161 (0%) Frame = +1 Query: 10 AAVIAKSSV-SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 186 AA++ KS V S +PA + P A+ VA + +MMVW P NNKMFETF Sbjct: 3 AAMMNKSVVLSKQCTKPAAT---PKVVTSKRSFASTVAN--KNREMMVWQPFNNKMFETF 57 Query: 187 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 366 S+LPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY NE+ IR G V+ Y DNRYWTM Sbjct: 58 SFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCIRMGPVASTYQDNRYWTM 117 Query: 367 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 WKLPMFGC D QVL EI ACT AFPDAY+RLV FD +QV Sbjct: 118 WKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQV 158 [25][TOP] >UniRef100_C4P6Y2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ankistrodesmus convolutus RepID=C4P6Y2_9CHLO Length = 165 Score = 185 bits (469), Expect = 2e-45 Identities = 89/142 (62%), Positives = 104/142 (73%), Gaps = 1/142 (0%) Frame = +1 Query: 67 SVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVA 246 ++R A + A KA A PA+ MVW PVNNK FETFSYLPPL+DEQIA QVDYIV Sbjct: 2 ALRLTAGSRVAAKAPVAAKPAK---FMVWQPVNNKFFETFSYLPPLNDEQIARQVDYIVN 58 Query: 247 NGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIV 423 NGW PCLEF++S AY+SN + +R + YYDNRYWT+WKLPMFGC DP QVL+EI Sbjct: 59 NGWTPCLEFSDSQTAYMSNTNVVRIQNGATANYYDNRYWTLWKLPMFGCTDPSQVLKEIA 118 Query: 424 ACTKAFPDAYVRLVAFDNQKQV 489 AC KA PDAYVR+ AFD +QV Sbjct: 119 ACVKACPDAYVRMAAFDANRQV 140 [26][TOP] >UniRef100_Q68BK9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris bacillaris RepID=Q68BK9_NANBA Length = 182 Score = 182 bits (462), Expect = 1e-44 Identities = 88/161 (54%), Positives = 108/161 (67%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 186 MA+ IA S+ + VA + + A V V + M+VWTP+NNK FETF Sbjct: 1 MASTIAFSTAAVRVAPITKVNATSTKARTAFVSNGTVK---KTTAMLVWTPINNKFFETF 57 Query: 187 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 366 S+LPPLSD +I QVDYIV NGW PCLEF++ + AY+ + + +R S Y DNRYW+M Sbjct: 58 SFLPPLSDSEITKQVDYIVRNGWTPCLEFSDPEGAYIGDTNTVRLQGTSAGYQDNRYWSM 117 Query: 367 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 WKLPMFGC D QVL+EI CTKAFP AY+RLVAFDNQKQV Sbjct: 118 WKLPMFGCTDGSQVLKEIAGCTKAFPGAYIRLVAFDNQKQV 158 [27][TOP] >UniRef100_Q68BL0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris bacillaris RepID=Q68BL0_NANBA Length = 182 Score = 182 bits (461), Expect = 1e-44 Identities = 87/161 (54%), Positives = 108/161 (67%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 186 MA+ IA S+ + +A + + A V V + M+VWTP+NNK FETF Sbjct: 1 MASTIAISTAAVRIAPITKVNAASTKARTAFVSNGTVK---KTTAMLVWTPINNKFFETF 57 Query: 187 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 366 S+LPPLSD +I QVDYIV NGW PCLEF++ + AY+ + + +R S Y DNRYW+M Sbjct: 58 SFLPPLSDSEITKQVDYIVRNGWTPCLEFSDPEGAYIGDTNTVRLQGTSAGYQDNRYWSM 117 Query: 367 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 WKLPMFGC D QVL+EI CTKAFP AY+RLVAFDNQKQV Sbjct: 118 WKLPMFGCTDGSQVLKEIAGCTKAFPGAYIRLVAFDNQKQV 158 [28][TOP] >UniRef100_B3VSA1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Parietochloris incisa RepID=B3VSA1_9CHLO Length = 189 Score = 181 bits (458), Expect = 3e-44 Identities = 95/166 (57%), Positives = 120/166 (72%), Gaps = 6/166 (3%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQAN-----QMMVWTPVNN 168 MAA A S +SA VA A ++ R + AL PA +AA A +N QMMVW P NN Sbjct: 1 MAAACA-SLLSAPVAVVASAAPARSLKALAPA-RAATFAQKTVSNGIKTRQMMVWQPTNN 58 Query: 169 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 348 + FET S+LPPL+D+QIA QVDY++ NGW+PCLEF+E++ AYV++++ IR+G+V+ Y D Sbjct: 59 RYFETLSFLPPLTDDQIAKQVDYMINNGWVPCLEFSEANMAYVASDNCIRYGNVASGYQD 118 Query: 349 NRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQ 486 NRYWTM+KLPMFGC DP QVL EI K FPDAY+RLVAFDN Q Sbjct: 119 NRYWTMFKLPMFGCTDPGQVLTEIANAEKCFPDAYIRLVAFDNVTQ 164 [29][TOP] >UniRef100_P26985 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Batophora oerstedii RepID=RBS_BATOE Length = 175 Score = 180 bits (456), Expect = 5e-44 Identities = 80/121 (66%), Positives = 95/121 (78%) Frame = +1 Query: 127 AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNE 306 +++ MMVW P NNK FETFSYLPPL+D+QI QVDYI+ N W PCLEFA SD+AYV+++ Sbjct: 31 SKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFAGSDQAYVTHD 90 Query: 307 SAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQ 486 + +R G + Y DNRYWTMWKLPMFGC D QVL EI ACTKAFPDAY+RLV FD +Q Sbjct: 91 NTVRMGDCASTYQDNRYWTMWKLPMFGCIDGSQVLTEISACTKAFPDAYIRLVCFDANRQ 150 Query: 487 V 489 V Sbjct: 151 V 151 [30][TOP] >UniRef100_Q9ZRA1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Chloromonas sp. ANT3 RepID=Q9ZRA1_9CHLO Length = 140 Score = 177 bits (449), Expect = 3e-43 Identities = 78/114 (68%), Positives = 90/114 (78%) Frame = +1 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW PVNNK +ETFSYLP L+ EQIA QVDY++ NGW PCLEFA+ ++VSNE+ +RF Sbjct: 3 VWQPVNNKQYETFSYLPALTTEQIAKQVDYVIRNGWTPCLEFADPSSSFVSNENTVRFRG 62 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 S YYDNRYWTMWKLPMFGC D QVL+EI AC AFP++Y RLVAFDN KQV Sbjct: 63 ASSNYYDNRYWTMWKLPMFGCTDASQVLKEIAACNAAFPESYSRLVAFDNNKQV 116 [31][TOP] >UniRef100_Q9STC5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Euglena gracilis RepID=Q9STC5_EUGGR Length = 271 Score = 173 bits (438), Expect = 6e-42 Identities = 82/137 (59%), Positives = 96/137 (70%) Frame = +1 Query: 79 MAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWI 258 MA +KP K A V M VW PVNNK FETFSYLPPLSD QIA QVD I+A G Sbjct: 116 MAMMKP--KVAAVLPFTSEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLS 173 Query: 259 PCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKA 438 PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC D QVLREI C +A Sbjct: 174 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRA 233 Query: 439 FPDAYVRLVAFDNQKQV 489 +P YVRL AFD+ KQV Sbjct: 234 YPQCYVRLAAFDSVKQV 250 [32][TOP] >UniRef100_P16881 Ribulose bisphosphate carboxylase small chain P8, chloroplastic n=1 Tax=Euglena gracilis RepID=RBS_EUGGR Length = 1273 Score = 173 bits (438), Expect = 6e-42 Identities = 82/137 (59%), Positives = 96/137 (70%) Frame = +1 Query: 79 MAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWI 258 MA +KP K A V M VW PVNNK FETFSYLPPLSD QIA QVD I+A G Sbjct: 116 MAMMKP--KVAAVLPFTSEKDMKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLS 173 Query: 259 PCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKA 438 PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC D QVLREI C +A Sbjct: 174 PCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCTDASQVLREISECRRA 233 Query: 439 FPDAYVRLVAFDNQKQV 489 +P YVRL AFD+ KQV Sbjct: 234 YPQCYVRLAAFDSVKQV 250 Score = 170 bits (431), Expect = 4e-41 Identities = 83/152 (54%), Positives = 100/152 (65%) Frame = +1 Query: 34 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 213 +S V RP+ SS +AA +M VW PVNNK FETFSYLPPLSD Sbjct: 1115 ISFVVQRPSGSSSSSWG----------MAAMTGEKEMKVWNPVNNKKFETFSYLPPLSDA 1164 Query: 214 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 393 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 1165 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 1224 Query: 394 DPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 D QVLREI C +A+P YVRL AFD+ KQV Sbjct: 1225 DASQVLREISECRRAYPQCYVRLAAFDSVKQV 1256 Score = 169 bits (429), Expect = 7e-41 Identities = 83/152 (54%), Positives = 99/152 (65%) Frame = +1 Query: 34 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 213 +S V RP+ SS +AA M VW PVNNK FETFSYLPPLSD Sbjct: 253 ISFVVQRPSGSSSSSWG----------MAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 302 Query: 214 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 393 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 303 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 362 Query: 394 DPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 D QVLREI C +A+P YVRL AFD+ KQV Sbjct: 363 DASQVLREISECRRAYPQCYVRLAAFDSVKQV 394 Score = 169 bits (429), Expect = 7e-41 Identities = 83/152 (54%), Positives = 99/152 (65%) Frame = +1 Query: 34 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 213 +S V RP+ SS +AA M VW PVNNK FETFSYLPPLSD Sbjct: 540 ISFVVQRPSGSSSSSWG----------MAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 589 Query: 214 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 393 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 590 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 649 Query: 394 DPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 D QVLREI C +A+P YVRL AFD+ KQV Sbjct: 650 DASQVLREISECRRAYPQCYVRLAAFDSVKQV 681 Score = 169 bits (429), Expect = 7e-41 Identities = 83/152 (54%), Positives = 100/152 (65%) Frame = +1 Query: 34 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 213 +S V RP+ SS + +AA M VW PVNNK FETFSYLPPLSD Sbjct: 684 ISFVVQRPSGSS-----------SSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 732 Query: 214 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 393 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 733 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 792 Query: 394 DPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 D QVLREI C +A+P YVRL AFD+ KQV Sbjct: 793 DASQVLREISECRRAYPQCYVRLAAFDSVKQV 824 Score = 169 bits (429), Expect = 7e-41 Identities = 83/152 (54%), Positives = 99/152 (65%) Frame = +1 Query: 34 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 213 +S V RP+ SS +AA M VW PVNNK FETFSYLPPLSD Sbjct: 971 ISFVVQRPSGSSSSSWG----------MAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 1020 Query: 214 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 393 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 1021 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 1080 Query: 394 DPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 D QVLREI C +A+P YVRL AFD+ KQV Sbjct: 1081 DASQVLREISECRRAYPQCYVRLAAFDSVKQV 1112 Score = 167 bits (424), Expect = 3e-40 Identities = 82/152 (53%), Positives = 99/152 (65%) Frame = +1 Query: 34 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 213 +S V RP+ SS + +AA M VW PVNNK FETFSYLPPLSD Sbjct: 397 ISFVVQRPSGSS-----------SSWGMAAMTGEKDMKVWNPVNNKKFETFSYLPPLSDA 445 Query: 214 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 393 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDN YWTMWKLPMFGC Sbjct: 446 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNHYWTMWKLPMFGCT 505 Query: 394 DPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 D QVLREI C +A+P YVRL AFD+ KQV Sbjct: 506 DASQVLREISECRRAYPQCYVRLAAFDSVKQV 537 Score = 166 bits (420), Expect = 7e-40 Identities = 83/152 (54%), Positives = 102/152 (67%) Frame = +1 Query: 34 VSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDE 213 +S V RP+ SS + + +AA +M VW PVNNK FETFSYLPPLSD Sbjct: 827 ISFVVQRPSGSS---------SSSSWGMAAMTGEKEMKVWNPVNNKKFETFSYLPPLSDA 877 Query: 214 QIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCR 393 QIA QVD I+A G PCLEFA + ++++N++ +RF + YYDNRYWTMWKLPMFGC Sbjct: 878 QIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRFSGTAAGYYDNRYWTMWKLPMFGCT 937 Query: 394 DPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 D QVLREI C +A+P YVRL AFD+ KQV Sbjct: 938 DASQVLREISECRRAYPQCYVRL-AFDSVKQV 968 [33][TOP] >UniRef100_Q68BK3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nannochloris bacillaris RepID=Q68BK3_NANBA Length = 180 Score = 172 bits (437), Expect = 8e-42 Identities = 88/161 (54%), Positives = 108/161 (67%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETF 186 MA+ +A + A+ RP + V+ A K V A + + MVWTPVNNK FETF Sbjct: 1 MASALA---FTPALVRP--TGVKTTVASKKNVFAVSNSTIKNTSAFMVWTPVNNKFFETF 55 Query: 187 SYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTM 366 S+LPPLS+ +I+ QVDY+V N + PCLEF+E + AYV + S IR S Y DNRYW M Sbjct: 56 SFLPPLSESEISKQVDYMVRNAFTPCLEFSEPENAYVGDASTIRLCGTSSGYQDNRYWPM 115 Query: 367 WKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 WKLPMFGC D QVL+EI ACTKAFP AY+RLVAFD +QV Sbjct: 116 WKLPMFGCTDGSQVLKEIAACTKAFPGAYIRLVAFDASRQV 156 [34][TOP] >UniRef100_C1E329 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas sp. RCC299 RepID=C1E329_9CHLO Length = 191 Score = 162 bits (411), Expect = 8e-39 Identities = 75/141 (53%), Positives = 97/141 (68%), Gaps = 4/141 (2%) Frame = +1 Query: 79 MAALKPAVKAAPVAAPAQA---NQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVAN 249 ++A+ P + APV + +A N MMVW P NK FETFS+LPPLSD+++A QV Y++ N Sbjct: 4 ISAVAPVLNKAPVVSTGKAANTNSMMVWQPHGNKFFETFSFLPPLSDQEVARQVQYLLNN 63 Query: 250 GWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVA 426 GW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC +P +VL+EI A Sbjct: 64 GWTPCIEFESAAKAYADTHGWSGLDSSVTAGYYDNRYWVMWKLPMYGCTNPEEVLQEIRA 123 Query: 427 CTKAFPDAYVRLVAFDNQKQV 489 CT AFPD ++R+ FDN KQV Sbjct: 124 CTSAFPDCFIRVAGFDNIKQV 144 [35][TOP] >UniRef100_C1N9I5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N9I5_9CHLO Length = 186 Score = 161 bits (408), Expect = 2e-38 Identities = 76/145 (52%), Positives = 96/145 (66%), Gaps = 1/145 (0%) Frame = +1 Query: 58 ARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDY 237 A SV P+ A PAV + +++ M VW P NNK FETFS+LPPLSD++IA QV Y Sbjct: 3 ALCSVAPVVAKVPAVSTGKAS---KSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQVQY 59 Query: 238 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLR 414 ++ NGW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC P +VL Sbjct: 60 LINNGWAPCIEFEGAGKAYCDTHGWSGLDSSVNAGYYDNRYWVMWKLPMYGCTSPDEVLA 119 Query: 415 EIVACTKAFPDAYVRLVAFDNQKQV 489 E+ ACT+AFPD ++R+ FDN KQV Sbjct: 120 EVRACTRAFPDCFIRVAGFDNIKQV 144 [36][TOP] >UniRef100_C1N9I4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N9I4_9CHLO Length = 183 Score = 161 bits (408), Expect = 2e-38 Identities = 76/145 (52%), Positives = 96/145 (66%), Gaps = 1/145 (0%) Frame = +1 Query: 58 ARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDY 237 A SV P+ A PAV + +++ M VW P NNK FETFS+LPPLSD++IA QV Y Sbjct: 3 ALCSVAPVVAKVPAVSTGKAS---KSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQVQY 59 Query: 238 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLR 414 ++ NGW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC P +VL Sbjct: 60 LINNGWAPCIEFEGAGKAYCDTHGWSGLDSSVNAGYYDNRYWVMWKLPMYGCTSPDEVLA 119 Query: 415 EIVACTKAFPDAYVRLVAFDNQKQV 489 E+ ACT+AFPD ++R+ FDN KQV Sbjct: 120 EVRACTRAFPDCFIRVAGFDNIKQV 144 [37][TOP] >UniRef100_C1N9I3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas pusilla CCMP1545 RepID=C1N9I3_9CHLO Length = 204 Score = 161 bits (408), Expect = 2e-38 Identities = 76/145 (52%), Positives = 96/145 (66%), Gaps = 1/145 (0%) Frame = +1 Query: 58 ARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDY 237 A SV P+ A PAV + +++ M VW P NNK FETFS+LPPLSD++IA QV Y Sbjct: 3 ALCSVAPVVAKVPAVSTGKAS---KSSAMQVWNPTNNKFFETFSFLPPLSDQEIARQVQY 59 Query: 238 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLR 414 ++ NGW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC P +VL Sbjct: 60 LINNGWAPCIEFEGAGKAYCDTHGWSGLDSSVNAGYYDNRYWVMWKLPMYGCTSPDEVLA 119 Query: 415 EIVACTKAFPDAYVRLVAFDNQKQV 489 E+ ACT+AFPD ++R+ FDN KQV Sbjct: 120 EVRACTRAFPDCFIRVAGFDNIKQV 144 [38][TOP] >UniRef100_P16129 Ribulose bisphosphate carboxylase small chain 1 (Fragment) n=1 Tax=Acetabularia peniculus RepID=RBS1_ACECL Length = 126 Score = 161 bits (408), Expect = 2e-38 Identities = 73/102 (71%), Positives = 82/102 (80%) Frame = +1 Query: 184 FSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWT 363 FSYLPPL+DEQI+ QVDYI+AN W PCLEFA SD+AY N++ IR G V+ Y DNRYWT Sbjct: 1 FSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNDNCIRMGPVASTYQDNRYWT 60 Query: 364 MWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 MWKLPMFGC D QVL EI ACTKAFPDAY+RLV FD +QV Sbjct: 61 MWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQV 102 [39][TOP] >UniRef100_C1E330 Ribulose bisphosphate carboxylase small chain n=1 Tax=Micromonas sp. RCC299 RepID=C1E330_9CHLO Length = 179 Score = 161 bits (407), Expect = 2e-38 Identities = 74/141 (52%), Positives = 98/141 (69%), Gaps = 4/141 (2%) Frame = +1 Query: 79 MAALKPAVKAAPVAAPAQA---NQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVAN 249 ++A+ P + APV + +A N MMVW P NK FETFS+LPPLSD+++A QV Y++ N Sbjct: 4 ISAVAPVLNKAPVVSTGKAANTNSMMVWQPHGNKFFETFSFLPPLSDQEVARQVQYLLNN 63 Query: 250 GWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVA 426 GW PC+EF + KAY SV+ YYDNRYW MWKLPM+GC +P +VL+EI A Sbjct: 64 GWTPCIEFESAAKAYADTHGWSGLDSSVTAGYYDNRYWVMWKLPMYGCTNPDEVLQEIRA 123 Query: 427 CTKAFPDAYVRLVAFDNQKQV 489 CT+AFP+ ++R+ FDN KQV Sbjct: 124 CTQAFPECFIRVAGFDNIKQV 144 [40][TOP] >UniRef100_Q33BU5 RuBisCO small subunits (Fragment) n=1 Tax=Chlorella pyrenoidosa RepID=Q33BU5_CHLPY Length = 124 Score = 155 bits (393), Expect = 1e-36 Identities = 69/100 (69%), Positives = 79/100 (79%) Frame = +1 Query: 190 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 369 YLPPL+D +I+ QVDYIV NGW PCLEFAES AY SNE+ IR + +CLYYDNRYWTMW Sbjct: 1 YLPPLTDAEISRQVDYIVNNGWTPCLEFAESTSAYASNENCIRMNNTTCLYYDNRYWTMW 60 Query: 370 KLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 KLPMFGC D QVL E+ C +AFPDAY+RLV FD +QV Sbjct: 61 KLPMFGCTDGHQVLAEVSNCRRAFPDAYIRLVGFDPVRQV 100 [41][TOP] >UniRef100_A4SA22 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4SA22_OSTLU Length = 169 Score = 154 bits (388), Expect = 4e-36 Identities = 71/143 (49%), Positives = 90/143 (62%), Gaps = 1/143 (0%) Frame = +1 Query: 64 SSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIV 243 S++ +A A A A MM+W P NKMFETFS+LPPLSD +I+ QV Y++ Sbjct: 2 SAITQASAQVAKTVAVTTGKVANAKSMMIWRPHGNKMFETFSFLPPLSDAEISKQVQYLL 61 Query: 244 ANGWIPCLEFAESDKAYVSNESAIRFG-SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREI 420 NGW PC+EF +S AY S++ YYDNRYW MWKLPM+GC++P +V+ EI Sbjct: 62 NNGWTPCIEFEDSAHAYTDGHGWANMDTSINAGYYDNRYWVMWKLPMYGCQNPDEVIAEI 121 Query: 421 VACTKAFPDAYVRLVAFDNQKQV 489 C K FPD YVR+ FDN KQV Sbjct: 122 NTCIKCFPDCYVRVAGFDNIKQV 144 [42][TOP] >UniRef100_Q7M229 Ribulose bisphosphate carboxylase small chain n=1 Tax=Euglena gracilis RepID=Q7M229_EUGGR Length = 138 Score = 153 bits (387), Expect = 5e-36 Identities = 73/123 (59%), Positives = 90/123 (73%), Gaps = 7/123 (5%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAE---SDKAY----VS 300 M VW PVNNK +ETFSYLPPLSD +IA QVD I+A GWIPCLEF+ S++AY ++ Sbjct: 1 MKVWNPVNNKFWETFSYLPPLSDREIAKQVDMIIAKGWIPCLEFSLREISERAYPCCYIA 60 Query: 301 NESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQ 480 N++ +RF + YYDNRYWTMWKLPMFGC D QVL+E+ A P+ +VRL AFD+ Sbjct: 61 NDNTVRFSCTAAGYYDNRYWTMWKLPMFGCTDASQVLKELSPLEFAAPENFVRLAAFDSV 120 Query: 481 KQV 489 KQV Sbjct: 121 KQV 123 [43][TOP] >UniRef100_Q00SG4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus tauri RepID=Q00SG4_OSTTA Length = 168 Score = 150 bits (378), Expect = 5e-35 Identities = 66/122 (54%), Positives = 84/122 (68%), Gaps = 1/122 (0%) Frame = +1 Query: 127 AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNE 306 A A MM+W P NKMFETFS+LPPLSD +IA Q Y++ NGW PC+EF +++ AY Sbjct: 22 ANAKSMMIWRPHGNKMFETFSFLPPLSDAEIAKQCQYLLNNGWTPCIEFEDAEHAYADGH 81 Query: 307 SAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQK 483 S++ LYYDNRYW MWKLPM+GC++ +VL E+ K FPD Y+R+V FDN K Sbjct: 82 GWSNLDSSINSLYYDNRYWVMWKLPMYGCQNTDEVLAEVNMAKKCFPDCYIRVVGFDNIK 141 Query: 484 QV 489 QV Sbjct: 142 QV 143 [44][TOP] >UniRef100_Q8S322 Ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (Fragment) n=1 Tax=Acetabularia acetabulum RepID=Q8S322_ACEAT Length = 126 Score = 149 bits (375), Expect = 1e-34 Identities = 67/102 (65%), Positives = 78/102 (76%) Frame = +1 Query: 184 FSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWT 363 +S+LPPL+DEQI+ QVDYI+AN W CLEFA SD+AY N++ IR V+ Y DNRYWT Sbjct: 1 YSFLPPLTDEQISKQVDYILANSWTACLEFAASDQAYAGNDNCIRMRPVASTYQDNRYWT 60 Query: 364 MWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 MWKLPMFGC D QVL EI ACT AFPDAY+R V FD +QV Sbjct: 61 MWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRFVCFDAYRQV 102 [45][TOP] >UniRef100_A9TKI7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TKI7_PHYPA Length = 181 Score = 148 bits (374), Expect = 2e-34 Identities = 83/177 (46%), Positives = 104/177 (58%), Gaps = 16/177 (9%) Frame = +1 Query: 7 MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------ 141 MA+V+A S+V S+AV+ +SV+ + LK + + A + Q Sbjct: 1 MASVVATSTVVAPAAFAASSSAVSTSESTSVKAFSGLKSSTLFSSKAQSLSSVQNGSRVQ 60 Query: 142 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 318 M VW P+ FETFSYLPPLSD+ IA QVDY++ IPCLEF +D +N S Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVDYMIQQKLIPCLEFDNADGVSRTNNS--- 117 Query: 319 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 S YYD RYWTMWKLPMFGC+DP QVLREI C K FP +VR++ FDN KQV Sbjct: 118 ----SPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECKKTFPGCFVRVLGFDNVKQV 170 [46][TOP] >UniRef100_B6RHQ3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Miscanthus x giganteus RepID=B6RHQ3_9POAL Length = 169 Score = 145 bits (366), Expect = 1e-33 Identities = 70/157 (44%), Positives = 94/157 (59%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ + A + +S+ A +P A V+ + M VW NK FET SYL Sbjct: 5 VMASSATAVAPFQGLKSTASLPVARRPTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPL++EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKL Sbjct: 65 PPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQ 486 PMFGC D QV +E+ ++PDAYVR++ FDN +Q Sbjct: 118 PMFGCTDASQVYKELQEAIASYPDAYVRILGFDNIRQ 154 [47][TOP] >UniRef100_A9T9D5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T9D5_PHYPA Length = 182 Score = 144 bits (364), Expect = 2e-33 Identities = 78/168 (46%), Positives = 102/168 (60%), Gaps = 7/168 (4%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKP----AVKAAPVAAPAQANQ---MMVWTPVN 165 M A A ++ S+A + +SV+ + LK A KA +++ ++ M VW P+ Sbjct: 10 MVAPAAFTAASSAASTSESASVKAFSGLKSNTLFASKAQSLSSVQNGSRVQCMQVWNPIG 69 Query: 166 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 345 FETFSYLPPLSD+ IA QV+Y++ G IPCLEF V+ + R + S YY Sbjct: 70 MTKFETFSYLPPLSDDSIAKQVEYMIQQGLIPCLEFD------VNADGVSRTNNSSPGYY 123 Query: 346 DNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 D RYWTMWKLPMFGC+D QVLREI C K FP +VR++ FDN KQV Sbjct: 124 DGRYWTMWKLPMFGCQDSSQVLREIEECKKTFPGCFVRILGFDNVKQV 171 [48][TOP] >UniRef100_A9SCN2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SCN2_PHYPA Length = 182 Score = 144 bits (364), Expect = 2e-33 Identities = 81/177 (45%), Positives = 106/177 (59%), Gaps = 16/177 (9%) Frame = +1 Query: 7 MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAV----KAAPVAAPAQANQ-- 141 MA+V+A SSV S++V+ +SV+ + LK A KA +++ ++ Sbjct: 1 MASVVAASSVVAPATFVAASSSVSNSKSNSVKAFSGLKSATLFTSKAETLSSVQNGSRVQ 60 Query: 142 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 318 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V++ R Sbjct: 61 CMQVWNPIGQTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFD------VNSNGVSR 114 Query: 319 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 + S YYD RYWTMWKLPMFGC+D QVLREI C K FP +VR++ FDN KQV Sbjct: 115 ANNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRVLGFDNVKQV 171 [49][TOP] >UniRef100_A7Y7F5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Chlorella pyrenoidosa RepID=A7Y7F5_CHLPY Length = 82 Score = 144 bits (363), Expect = 3e-33 Identities = 64/81 (79%), Positives = 69/81 (85%) Frame = +1 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW PVNNK FETFSYLPPLS +QIA QVDYIV NGW PCLEFA+ D AYVSN+S +RFG+ Sbjct: 1 VWKPVNNKFFETFSYLPPLSGDQIARQVDYIVLNGWTPCLEFADPDCAYVSNDSCVRFGN 60 Query: 328 VSCLYYDNRYWTMWKLPMFGC 390 VS Y DNRYWTMWKLPMFGC Sbjct: 61 VSVGYQDNRYWTMWKLPMFGC 81 [50][TOP] >UniRef100_A9U4X7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U4X7_PHYPA Length = 182 Score = 144 bits (362), Expect = 4e-33 Identities = 81/177 (45%), Positives = 102/177 (57%), Gaps = 16/177 (9%) Frame = +1 Query: 7 MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------ 141 MA+++A S+V S+AV+ SSV+ + LK A + A + Q Sbjct: 1 MASIVAASTVVAPAAFAAASSAVSTSEASSVKAFSGLKSATLFSSKAQTLSSVQNGSRVQ 60 Query: 142 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 318 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQNLIPCLEFD------VNANGVSR 114 Query: 319 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 + S YYD RYWTMWKLPMFGC+D QVLREI C K FP +VR++ FDN KQV Sbjct: 115 TNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRVLGFDNVKQV 171 [51][TOP] >UniRef100_A9S3R8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S3R8_PHYPA Length = 181 Score = 144 bits (362), Expect = 4e-33 Identities = 82/177 (46%), Positives = 101/177 (57%), Gaps = 16/177 (9%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS---------VRPMAALKPAV-------KAAPVAAPAQAN 138 MA+++A S+V A A A SS V+ + LK A + + V ++ N Sbjct: 1 MASIVAASTVVAPAAFAAASSGVSTSESTSVKAFSGLKSATLFSSQSQQLSSVQNGSRVN 60 Query: 139 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 318 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF S N S Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSKGVTRENNS--- 117 Query: 319 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 S YYD RYWTMWKLPMFGC+D QVLREI C K FP +VR++ FDN KQV Sbjct: 118 ----SPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRVLGFDNVKQV 170 [52][TOP] >UniRef100_Q9SXH1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Physcomitrella patens RepID=Q9SXH1_PHYPA Length = 214 Score = 143 bits (361), Expect = 5e-33 Identities = 77/169 (45%), Positives = 99/169 (58%), Gaps = 8/169 (4%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAV-------KAAPVAAPAQANQMMVWTPV 162 + A +A S+ V P+ SS V+ + LK A K + V ++ M VW P+ Sbjct: 39 VVAPVALGGASSCVGAPSESSSVKAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPI 98 Query: 163 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 342 FETFSYLPPL+D+QIA QVDY++ IPC+EF +N S G+ S Y Sbjct: 99 GQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFS----GAGSSGY 154 Query: 343 YDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YD RYWTMWKLPMFGC D QVLREI C FP +VR++ FD++KQV Sbjct: 155 YDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQV 203 [53][TOP] >UniRef100_C5Y519 Ribulose bisphosphate carboxylase small chain n=1 Tax=Sorghum bicolor RepID=C5Y519_SORBI Length = 169 Score = 143 bits (361), Expect = 5e-33 Identities = 70/157 (44%), Positives = 93/157 (59%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ + A + +S+ A + A V+ + M VW NK FET SYL Sbjct: 5 VMASSATAVAPFQGLKSTATLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPL++EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKL Sbjct: 65 PPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQ 486 PMFGC D QV +E+ ++PDAYVR++ FDN KQ Sbjct: 118 PMFGCTDASQVYKELQEAIASYPDAYVRILGFDNIKQ 154 [54][TOP] >UniRef100_A9TCL7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TCL7_PHYPA Length = 184 Score = 143 bits (361), Expect = 5e-33 Identities = 79/171 (46%), Positives = 100/171 (58%), Gaps = 11/171 (6%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSS----VRPMAALKPAV-------KAAPVAAPAQANQMMVWT 156 +AV A S+ AA + A S+ V+ + LKPA K V ++ M VW Sbjct: 7 SAVAAPVSLGAAASSVAASNESATVKAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWN 66 Query: 157 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 336 P+ FETFSYLPPL+D+QIA QVDY++ IPC+EF +N S G+ S Sbjct: 67 PIGQPKFETFSYLPPLTDDQIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFS----GAGSS 122 Query: 337 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVLREI C FP +VR++ FD++KQV Sbjct: 123 GYYDGRYWTMWKLPMFGCTDSSQVLREIQECKSQFPSCWVRVLGFDSKKQV 173 [55][TOP] >UniRef100_A9U4X8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U4X8_PHYPA Length = 182 Score = 143 bits (360), Expect = 7e-33 Identities = 81/177 (45%), Positives = 101/177 (57%), Gaps = 16/177 (9%) Frame = +1 Query: 7 MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------ 141 MA+++A S+V S+AV SSV+ + LK A + A + Q Sbjct: 1 MASIVAASTVVAPAAFAAASSAVMTSEASSVKAFSGLKSATLFSSKAQTLSSVQNGSRVQ 60 Query: 142 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 318 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQNLIPCLEFD------VNANGVSR 114 Query: 319 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 + S YYD RYWTMWKLPMFGC+D QVLREI C K FP +VR++ FDN KQV Sbjct: 115 TNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRVLGFDNVKQV 171 [56][TOP] >UniRef100_A9RG04 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RG04_PHYPA Length = 184 Score = 143 bits (360), Expect = 7e-33 Identities = 81/179 (45%), Positives = 102/179 (56%), Gaps = 18/179 (10%) Frame = +1 Query: 7 MAAVIAKSSV-----------SAAVARPARSSVRPMAALKP-------AVKAAPVAAPAQ 132 MA+V+A SS S+ V+ +SV+ + LK A K + V ++ Sbjct: 1 MASVVAASSAVAPAAAFVAASSSGVSTSEATSVKAFSGLKSTTLFSGNARKLSSVQNGSR 60 Query: 133 ANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESA 312 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V++ Sbjct: 61 VQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFD------VNSNGV 114 Query: 313 IRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 R + S YYD RYWTMWKLPMFGC+D QVLREI C K FP YVR++ FDN KQV Sbjct: 115 SRVNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCYVRVLGFDNVKQV 173 [57][TOP] >UniRef100_A9PI67 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa RepID=A9PI67_POPTR Length = 170 Score = 143 bits (360), Expect = 7e-33 Identities = 73/157 (46%), Positives = 93/157 (59%), Gaps = 7/157 (4%) Frame = +1 Query: 37 SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ-------MMVWTPVNNKMFETFSYL 195 ++AVA P +R + +P VA ++ M W P+NNK FE SYL Sbjct: 8 ASAVAAPGYHGLRALPTKQPFATKNSVARSSRTVSNGSKTFCMKTWNPINNKKFEALSYL 67 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS++ IA ++DY++ GWIPCLEF E V E + G YYD RYWT+WKL Sbjct: 68 PPLSEDSIAKEIDYMMKKGWIPCLEFDEVGS--VRREHSRMPG-----YYDGRYWTLWKL 120 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQ 486 PMFGC D QVL EI C KA+PDAY+R +AFDN+ Q Sbjct: 121 PMFGCTDSSQVLEEIHECKKAYPDAYIRCLAFDNKHQ 157 [58][TOP] >UniRef100_Q43832 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Spinacia oleracea RepID=RBS2_SPIOL Length = 180 Score = 142 bits (359), Expect = 9e-33 Identities = 79/173 (45%), Positives = 104/173 (60%), Gaps = 12/173 (6%) Frame = +1 Query: 7 MAAVIAKSSVSAAVAR-PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMV 150 MA+ + S+ A V+R PA++S V P LK PA K +N M V Sbjct: 1 MASSVLSSAAVATVSRTPAQASMVAPFTGLKSTVGFPATKKNDDITSLASNGGRVQCMKV 60 Query: 151 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 330 W N K +ET SYLPPL+ +Q+A QVDY++ N W+PCLEF E+D +V E G Sbjct: 61 WPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEF-ETDHGFVYREHHNSPG-- 117 Query: 331 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC DP QVL E+ C K +P+A++R++ FD+ +QV Sbjct: 118 ---YYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNRQV 167 [59][TOP] >UniRef100_P08706 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Solanum lycopersicum RepID=RBS1_SOLLC Length = 181 Score = 142 bits (359), Expect = 9e-33 Identities = 74/174 (42%), Positives = 104/174 (59%), Gaps = 13/174 (7%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVK------------AAPVAAPAQANQMM 147 MA+ I S+ +A + A++S V P LK A + + + M Sbjct: 1 MASSIVSSAAAATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQ 60 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E+++ +V E+ G Sbjct: 61 VWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETERGFVYRENNSSPG- 118 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL E+ KA+P A+VR++ FDN +QV Sbjct: 119 ----YYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQV 168 [60][TOP] >UniRef100_Q75WT7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=Q75WT7_PHYPA Length = 184 Score = 142 bits (357), Expect = 1e-32 Identities = 77/168 (45%), Positives = 101/168 (60%), Gaps = 7/168 (4%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKPAV-------KAAPVAAPAQANQMMVWTPVN 165 ++ +A SSV+A+ SSV+ + LK A + + V ++ M VW P+ Sbjct: 13 VSVTVASSSVAAS---RESSSVKAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIG 69 Query: 166 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 345 FETFSYLPPLSD+QIA QVDY++ IPC+EF +N S GS S YY Sbjct: 70 QPKFETFSYLPPLSDDQIARQVDYMIQQNLIPCIEFDTVGAVSRTNFS----GSGSSGYY 125 Query: 346 DNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 D RYWTMWKLPMFGC D QVLREI C ++P +VR++ FD++KQV Sbjct: 126 DGRYWTMWKLPMFGCTDSSQVLREIQECKTSYPSCWVRVLGFDSKKQV 173 [61][TOP] >UniRef100_Q3LFQ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Panax ginseng RepID=Q3LFQ4_PANGI Length = 183 Score = 142 bits (357), Expect = 1e-32 Identities = 79/175 (45%), Positives = 108/175 (61%), Gaps = 14/175 (8%) Frame = +1 Query: 7 MAAVIAKSSVSAAVAR--PARSS-VRPMAALKPAVKAAPV--------AAPAQANQ---M 144 MA+ + S+ AAV+R PA++S V P LK + A PV + P+ + M Sbjct: 1 MASSVISSATVAAVSRAVPAQASMVAPFTGLK-STAAFPVTRKVNDITSLPSNGGRVQCM 59 Query: 145 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 324 VW P+ K FET SYLP L+ EQ++ +VDY++ +GW+PCLEF E + +V E G Sbjct: 60 KVWPPLGLKKFETLSYLPQLTQEQLSKEVDYLLRSGWVPCLEF-ELEHGFVYREHHHSPG 118 Query: 325 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL+E+ C K +P+AY+R++ FDN +QV Sbjct: 119 -----YYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPNAYIRIIGFDNVRQV 168 [62][TOP] >UniRef100_A9SRS0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9SRS0_PHYPA Length = 182 Score = 142 bits (357), Expect = 1e-32 Identities = 81/177 (45%), Positives = 101/177 (57%), Gaps = 16/177 (9%) Frame = +1 Query: 7 MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------ 141 MA++IA SSV S+AV+ +SV+ + LK + A + Q Sbjct: 1 MASIIAASSVVAPAALSAASSAVSTSESTSVKAFSGLKSTTLFSSKAQTLSSVQNGSRVQ 60 Query: 142 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 318 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFD------VNANGVSR 114 Query: 319 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 + S YYD RYWTMWKLPMFGC+D QVLREI C K FP +VR++ FDN KQV Sbjct: 115 ANNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRVLGFDNVKQV 171 [63][TOP] >UniRef100_A7Q6D7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Vitis vinifera RepID=A7Q6D7_VITVI Length = 169 Score = 142 bits (357), Expect = 1e-32 Identities = 64/124 (51%), Positives = 81/124 (65%) Frame = +1 Query: 115 VAAPAQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAY 294 V+ ++ + M W P+NNK FET SYLPPLSD+ IA ++DY++ GWIPCLEF E + Sbjct: 39 VSNGSKTHCMKTWNPINNKKFETLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEVGYVF 98 Query: 295 VSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFD 474 N YYD RYWT+WKLPMFGC D QVL EI C K +P+AY+R +AFD Sbjct: 99 RKNSQIPG-------YYDGRYWTLWKLPMFGCNDASQVLNEIHECKKTYPNAYIRCLAFD 151 Query: 475 NQKQ 486 N+ Q Sbjct: 152 NEHQ 155 [64][TOP] >UniRef100_O20253 Ribulose bisphosphate carboxylase small chain n=1 Tax=Spinacia oleracea RepID=O20253_SPIOL Length = 180 Score = 141 bits (356), Expect = 2e-32 Identities = 79/173 (45%), Positives = 104/173 (60%), Gaps = 12/173 (6%) Frame = +1 Query: 7 MAAVIAKSSVSAAVAR-PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMV 150 MA+ + S+ A V+R PA++S V P LK PA K +N M V Sbjct: 1 MASSVLSSARVATVSRTPAQASMVAPFTGLKSTVGFPATKKNDDITSLASNGGRVQCMKV 60 Query: 151 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 330 W N K +ET SYLPPL+ +Q+A QVDY++ N W+PCLEF E+D +V E G Sbjct: 61 WPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEF-ETDHGFVYREHHNSPG-- 117 Query: 331 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC DP QVL E+ C K +P+A++R++ FD+ +QV Sbjct: 118 ---YYDGRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGFDSNRQV 167 [65][TOP] >UniRef100_P19309 Ribulose bisphosphate carboxylase small chain SSU40A, chloroplastic n=1 Tax=Lemna gibba RepID=RBS3_LEMGI Length = 177 Score = 141 bits (356), Expect = 2e-32 Identities = 76/170 (44%), Positives = 101/170 (59%), Gaps = 16/170 (9%) Frame = +1 Query: 28 SSVSAAVAR--PARSSVRPMAALKPAVKAAPVAAPAQANQ--------------MMVWTP 159 +S +AAVAR PA+SS+ P A + +V P A +AN M VW P Sbjct: 7 ASTAAAVARAGPAQSSMVPFNACRSSV---PFPATRKANNNLSTLPGNGGRVSCMQVWPP 63 Query: 160 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 339 K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + S Sbjct: 64 EGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA-------SPG 116 Query: 340 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QV+ E+ KA+P+ +VR++ FDN++QV Sbjct: 117 YYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQV 166 [66][TOP] >UniRef100_A9RJ57 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9RJ57_PHYPA Length = 181 Score = 141 bits (355), Expect = 3e-32 Identities = 81/177 (45%), Positives = 103/177 (58%), Gaps = 16/177 (9%) Frame = +1 Query: 7 MAAVIAKSSVSA----AVARPARSS-----VRPMAALKPAV-------KAAPVAAPAQAN 138 MA+ +A S+V A A A PA S+ V+ + LK A ++ V ++ Sbjct: 1 MASTVAASAVVAPTAFAAASPAASTSGSTTVKAFSGLKSATVFSGKAQNSSSVQNGSRVQ 60 Query: 139 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 318 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF ++ +N S Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNANGVSRTNNS--- 117 Query: 319 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 S YYD RYWTMWKLPMFGC+D QVLREI C K FP +VR++ FDN KQV Sbjct: 118 ----SPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRVLGFDNVKQV 170 [67][TOP] >UniRef100_A9U377 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9U377_PHYPA Length = 182 Score = 140 bits (354), Expect = 3e-32 Identities = 80/177 (45%), Positives = 100/177 (56%), Gaps = 16/177 (9%) Frame = +1 Query: 7 MAAVIAKSSV---------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------ 141 MA+V+A S++ SA+V +SV+ + LK A A + Q Sbjct: 1 MASVVAASTIVAPAAFAAASASVGSADSTSVKAFSGLKSATLFTSKAQTLSSVQNRSRVQ 60 Query: 142 -MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 318 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF V+ R Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFD------VNANGVSR 114 Query: 319 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 + S YYD RYWTMWKLPMFGC+D QVLREI C K FP +VR++ FDN KQV Sbjct: 115 TNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCFVRVLGFDNVKQV 171 [68][TOP] >UniRef100_A9TWU8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TWU8_PHYPA Length = 183 Score = 140 bits (354), Expect = 3e-32 Identities = 77/168 (45%), Positives = 98/168 (58%), Gaps = 7/168 (4%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKP-------AVKAAPVAAPAQANQMMVWTPVN 165 + A A ++ S+AV+ SSV+ + LK A + V ++ M VW P+ Sbjct: 12 VVAPTAFAAASSAVSTSESSSVKAFSGLKSNTLFSSKAQTLSSVQNGSRVQCMQVWNPIG 71 Query: 166 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 345 FETFSYLPPLSD+ IA QV+Y++ IPCLEF ++ +N S S YY Sbjct: 72 MTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNANGVSRTNNS-------SPGYY 124 Query: 346 DNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 D RYWTMWKLPMFGC D QVLREI C K FP +VR++ FDN KQV Sbjct: 125 DGRYWTMWKLPMFGCNDSAQVLREIEECKKTFPGCFVRVLGFDNVKQV 172 [69][TOP] >UniRef100_P18960 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Silene latifolia subsp. alba RepID=RBS_SILPR Length = 177 Score = 140 bits (354), Expect = 3e-32 Identities = 74/173 (42%), Positives = 103/173 (59%), Gaps = 12/173 (6%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPA------------QANQMMV 150 MA++++ ++V A + V P + LK + A PV+ + + N M V Sbjct: 1 MASLMSNAAVVTASTAAQANMVAPFSGLK-STSAFPVSRKSNVDITSLATNGGRVNCMQV 59 Query: 151 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 330 W P N K FET SYLP LS+E + +++Y++ GW+PCLEF E A+V E+ G Sbjct: 60 WPPRNLKKFETLSYLPTLSEESLLKEINYLLIKGWVPCLEF-EVGPAHVYRENNKSPG-- 116 Query: 331 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QV E+V C A+PDA+VR++ FDN++QV Sbjct: 117 ---YYDGRYWTMWKLPMFGCTDASQVAAEVVECKNAYPDAHVRIIGFDNKRQV 166 [70][TOP] >UniRef100_Q96542 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Betula pendula RepID=RBS_BETVE Length = 182 Score = 140 bits (354), Expect = 3e-32 Identities = 81/176 (46%), Positives = 103/176 (58%), Gaps = 15/176 (8%) Frame = +1 Query: 7 MAAVIAKSSVSAAVAR--PARSS-VRPMAALKPAVKAAPVAAPA------------QANQ 141 MA + S+ AAV+R PA+SS V P LK + A PV + Sbjct: 1 MACSMISSATVAAVSRASPAQSSMVAPFTCLK-STSAFPVTQKTNNDITSIASNGGRVQC 59 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M VW P+ K FET SYLPPLS EQ+A +VDY++ IPCLEF E + +V E Sbjct: 60 MQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEF-ELEHGFVYREHNRSP 118 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QVL+E+ C KA+P A++R++ FDN++QV Sbjct: 119 G-----YYDGRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGFDNKRQV 169 [71][TOP] >UniRef100_P07179 Ribulose bisphosphate carboxylase small chain 2A, chloroplastic n=1 Tax=Solanum lycopersicum RepID=RBS2A_SOLLC Length = 180 Score = 140 bits (354), Expect = 3e-32 Identities = 76/174 (43%), Positives = 103/174 (59%), Gaps = 11/174 (6%) Frame = +1 Query: 1 LKMAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ------MM 147 + AAV +S+V+ A S V P LK P K + + A+ M Sbjct: 6 ISSAAVATRSNVTQA------SMVAPFTGLKSSATFPVTKKQNLDITSIASNGGRVSCMQ 59 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E++ +V E+ G Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYRENNKSPG- 117 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL E+ KA+P A+VR++ FDN +QV Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQV 167 [72][TOP] >UniRef100_Q9XGX4 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Amaranthus hypochondriacus RepID=RBS3_AMAHP Length = 180 Score = 140 bits (353), Expect = 4e-32 Identities = 72/165 (43%), Positives = 100/165 (60%), Gaps = 4/165 (2%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPA----QANQMMVWTPVNNKM 174 + AV+ S A + P + ++ +A+ K+ + + A + M VW PV K Sbjct: 10 ITAVVGASGAQANMVAPF-NGLKSIASFPVTRKSNDITSIASNGGRVQCMQVWPPVGKKK 68 Query: 175 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 354 FET SYLPPLSD Q+ AQV Y++ NGWIPC+EF E + +V E+ G Y D R Sbjct: 69 FETLSYLPPLSDAQLLAQVQYLLNNGWIPCIEF-ELEHPFVYRENHRSPG-----YQDGR 122 Query: 355 YWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YWTMWKLPM+GC DP QVL E+ KA+P A++R++ FDN++QV Sbjct: 123 YWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQV 167 [73][TOP] >UniRef100_B9S5G3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ricinus communis RepID=B9S5G3_RICCO Length = 181 Score = 140 bits (352), Expect = 6e-32 Identities = 75/167 (44%), Positives = 102/167 (61%), Gaps = 13/167 (7%) Frame = +1 Query: 28 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNN 168 SS S + + PA+++ V P LK A + PV A + M VW P+ Sbjct: 7 SSASVSRSSPAQATMVAPFTGLKSAA-SFPVTRKANNDITSIASNGGRVQCMQVWPPLGK 65 Query: 169 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 348 K FET SYLP L+DEQ+A +VDY++ GWIPCLEF E + +V E+ G YYD Sbjct: 66 KKFETLSYLPDLTDEQLAKEVDYLLRKGWIPCLEF-ELEHGFVYRENHRSPG-----YYD 119 Query: 349 NRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLPMFGC D QVL+E+ KA+P++++R++ FDN++QV Sbjct: 120 GRYWTMWKLPMFGCSDSTQVLKELDEAKKAYPNSFIRIIGFDNRRQV 166 [74][TOP] >UniRef100_A9YTZ8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Solanum tuberosum RepID=A9YTZ8_SOLTU Length = 181 Score = 140 bits (352), Expect = 6e-32 Identities = 71/169 (42%), Positives = 103/169 (60%), Gaps = 6/169 (3%) Frame = +1 Query: 1 LKMAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------MMVWTPV 162 + AAV +++V+ A + A + AA P + + + A+ M VW P+ Sbjct: 6 ISSAAVATRTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPI 65 Query: 163 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 342 N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ +V E+ G Y Sbjct: 66 NTKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSPG-----Y 119 Query: 343 YDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YD RYWTMWKLPMFGC D QVL E+ C K++P A++R++ FDN +QV Sbjct: 120 YDGRYWTMWKLPMFGCTDATQVLAEVQECKKSYPQAWIRIIGFDNVRQV 168 [75][TOP] >UniRef100_A9TT85 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TT85_PHYPA Length = 183 Score = 140 bits (352), Expect = 6e-32 Identities = 80/176 (45%), Positives = 101/176 (57%), Gaps = 15/176 (8%) Frame = +1 Query: 7 MAAVIAKS---SVSAAVARPAR-----SSVRPMAALKPAVKAAPVAAPAQANQ------- 141 MA+ +A S VS A A PA +SV+ + LK A + A + Q Sbjct: 1 MASAVASSVVAPVSLAAASPAAVSRDSTSVKAFSGLKSATLFSSQAQTLSSVQNGSRVQC 60 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M VW P+ FETFSYLPPL+D++IA QVDY++ IPC+EF +N S Sbjct: 61 MQVWNPIGQPKFETFSYLPPLTDDEIAKQVDYMIQQNLIPCIEFDTVGSVSRTNFS---- 116 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G+ S YYD RYWTMWKLPMFGC D QVLREI C FP +VR++ FD++KQV Sbjct: 117 GAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQECKTQFPSCWVRVLGFDSKKQV 172 [76][TOP] >UniRef100_P16032 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS1_MESCR Length = 182 Score = 140 bits (352), Expect = 6e-32 Identities = 78/174 (44%), Positives = 102/174 (58%), Gaps = 13/174 (7%) Frame = +1 Query: 7 MAAVIAKSSVSAAVAR-PARSS-VRPMAALKPAVKAAPVAAP-----------AQANQMM 147 MA+ + S+ A V R PA++S V P LK +V A PV + M Sbjct: 1 MASSMVSSAAVATVNRTPAQASMVAPFNGLK-SVAAFPVTKKNNDITSVATNGGRVQCMQ 59 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P+ K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G Sbjct: 60 VWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG- 117 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC DP QV+ E+ KA+P+A++R++ FDN +QV Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQV 167 [77][TOP] >UniRef100_B6RHQ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Miscanthus x giganteus RepID=B6RHQ4_9POAL Length = 169 Score = 139 bits (351), Expect = 7e-32 Identities = 69/157 (43%), Positives = 92/157 (58%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ + A + +S+ A + A V+ + M VW NK FET SYL Sbjct: 5 VMASSATAVAPFQWLKSTASLPVARRSTTSLAKVSNGGRIRCMQVWPAYGNKKFETLSYL 64 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPL++EQ+ QVDY++ N W+PCLEF++ Y N S S YYD RYWTMWKL Sbjct: 65 PPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------STSPCYYDGRYWTMWKL 117 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQ 486 PMFGC D QV +E ++PDAYVR++ FDN +Q Sbjct: 118 PMFGCTDASQVYKEPQEAIASYPDAYVRILGFDNIRQ 154 [78][TOP] >UniRef100_P26576 Ribulose bisphosphate carboxylase small chain 2B, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBSB_SOLTU Length = 180 Score = 139 bits (351), Expect = 7e-32 Identities = 76/174 (43%), Positives = 103/174 (59%), Gaps = 13/174 (7%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP------------AQANQMM 147 MA+ I S+ A A A++S V P LK + + PV+ + M Sbjct: 1 MASSIVSSAAVATRANGAQASMVGPFTGLK-STASFPVSRKQNLDITSIASNGGRVRCMQ 59 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+ G Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENNKSPG- 117 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL E+ KA+P A++R++ FDN +QV Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQV 167 [79][TOP] >UniRef100_Q08185 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS5_MESCR Length = 182 Score = 139 bits (351), Expect = 7e-32 Identities = 73/166 (43%), Positives = 98/166 (59%), Gaps = 10/166 (6%) Frame = +1 Query: 22 AKSSVSAAVARPARSSVRPMAALKPAVKAAPV----------AAPAQANQMMVWTPVNNK 171 A ++++AA + V P LK ++ A PV A+ Q MVW P+ K Sbjct: 9 AATTMAAATTTAQANMVAPFNGLK-SISAFPVTRKNNDITSVASNGGRVQCMVWPPLGMK 67 Query: 172 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 351 FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G YYD Sbjct: 68 KFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG-----YYDG 121 Query: 352 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLPMFGC DP QV+ E+ KA+P+A++R++ FDN +QV Sbjct: 122 RYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQV 167 [80][TOP] >UniRef100_P05349 Ribulose bisphosphate carboxylase small chain 3B, chloroplastic n=1 Tax=Solanum lycopersicum RepID=RBS3B_SOLLC Length = 180 Score = 139 bits (351), Expect = 7e-32 Identities = 75/174 (43%), Positives = 104/174 (59%), Gaps = 13/174 (7%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP------------AQANQMM 147 MA+ I S+ A A++S V P LK + + PV+ + + M Sbjct: 1 MASSIVSSAAVATRGNGAQASMVAPFTGLK-STASFPVSRKQNLDITSIASNGGRVSCMQ 59 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E++ +V E+ G Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYRENHKSPG- 117 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL E+ KA+P A+VR++ FDN +QV Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQV 167 [81][TOP] >UniRef100_Q04450 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS2_MESCR Length = 180 Score = 139 bits (351), Expect = 7e-32 Identities = 73/172 (42%), Positives = 98/172 (56%), Gaps = 11/172 (6%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPA-----------QANQMMVW 153 MA++++ ++V S V P LK +V A PV + + M VW Sbjct: 1 MASMMSNAAVVGRTTPAQASMVAPFTGLK-SVSAFPVTKKSNDITSIASNGGRVQCMQVW 59 Query: 154 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 333 P+ K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G Sbjct: 60 PPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG--- 115 Query: 334 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC DP QV+ E+ KA+P+A+ R++ FDN +QV Sbjct: 116 --YYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFTRIIGFDNVRQV 165 [82][TOP] >UniRef100_P10795 Ribulose bisphosphate carboxylase small chain 1A, chloroplastic n=2 Tax=Arabidopsis thaliana RepID=RBS1A_ARATH Length = 180 Score = 139 bits (351), Expect = 7e-32 Identities = 75/171 (43%), Positives = 104/171 (60%), Gaps = 14/171 (8%) Frame = +1 Query: 19 IAKSSVSAA--VARPARSS-VRPMAALK-----PAVKAAP------VAAPAQANQMMVWT 156 +A S +S+A VA PA+++ V P LK PA + A + + N M VW Sbjct: 1 MASSMLSSATMVASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWP 60 Query: 157 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 336 P+ K FET SYLP L+D ++A +VDY++ N WIPC+EF E + +V E G Sbjct: 61 PIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEF-ELEHGFVYREHGNSPG---- 115 Query: 337 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLP+FGC D QVL+E+ C K +P+A++R++ FDN +QV Sbjct: 116 -YYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQV 165 [83][TOP] >UniRef100_A9YTZ7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Solanum tuberosum RepID=A9YTZ7_SOLTU Length = 181 Score = 139 bits (350), Expect = 1e-31 Identities = 71/169 (42%), Positives = 103/169 (60%), Gaps = 6/169 (3%) Frame = +1 Query: 1 LKMAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------MMVWTPV 162 + AAV +++V+ A + A + AA P + + + A+ M VW P+ Sbjct: 6 ISSAAVATRTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPI 65 Query: 163 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 342 N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ +V E+ G Y Sbjct: 66 NMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSPG-----Y 119 Query: 343 YDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YD RYWTMWKLPMFGC D QVL E+ C K++P A++R++ FDN +QV Sbjct: 120 YDGRYWTMWKLPMFGCTDTTQVLAEVQECKKSYPQAWIRIIGFDNVRQV 168 [84][TOP] >UniRef100_A9S8M6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S8M6_PHYPA Length = 182 Score = 139 bits (350), Expect = 1e-31 Identities = 81/178 (45%), Positives = 99/178 (55%), Gaps = 17/178 (9%) Frame = +1 Query: 7 MAAVIAKSSV----------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ----- 141 MA+V+A SS S+ V+ +SV+ + LK A + A + Q Sbjct: 1 MASVVAASSAVAPAAAFGAASSGVSTSEATSVKAFSGLKSATLFSGNAQTLSSVQNGSRV 60 Query: 142 --MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAI 315 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF S+ N S Sbjct: 61 QCMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSNGVSRVNNS-- 118 Query: 316 RFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 S YYD RYWTMWKLPMFGC+D QVLREI C FP YVR++ FDN KQV Sbjct: 119 -----SPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKTTFPGCYVRVLGFDNVKQV 171 [85][TOP] >UniRef100_P19310 Ribulose bisphosphate carboxylase small chain SSU40B, chloroplastic n=1 Tax=Lemna gibba RepID=RBS4_LEMGI Length = 177 Score = 139 bits (350), Expect = 1e-31 Identities = 74/170 (43%), Positives = 101/170 (59%), Gaps = 16/170 (9%) Frame = +1 Query: 28 SSVSAAVAR--PARSSVRPMAALKPAVKAAPVAAPAQANQ--------------MMVWTP 159 +S +AAVAR PA++++ P A + +V P A +AN M VW P Sbjct: 7 ASTAAAVARAGPAQTNMVPFNACRSSV---PFPATRKANNDLSTLPSNGGRVSCMQVWPP 63 Query: 160 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 339 K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + S Sbjct: 64 EGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA-------SPG 116 Query: 340 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QV+ E+ KA+P+ +VR++ FDN++QV Sbjct: 117 YYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQV 166 [86][TOP] >UniRef100_P32764 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBS3_SOLTU Length = 181 Score = 139 bits (350), Expect = 1e-31 Identities = 74/174 (42%), Positives = 101/174 (58%), Gaps = 13/174 (7%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVK------------AAPVAAPAQANQMM 147 MA+ I S+ A + A++S V P LK A + + + M Sbjct: 1 MASSIVSSAAVATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQ 60 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+ G Sbjct: 61 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSPG- 118 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL E+ KA+P A++R++ FDN +QV Sbjct: 119 ----YYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWIRIIGFDNVRQV 168 [87][TOP] >UniRef100_P26574 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBS1_SOLTU Length = 181 Score = 139 bits (350), Expect = 1e-31 Identities = 71/169 (42%), Positives = 103/169 (60%), Gaps = 6/169 (3%) Frame = +1 Query: 1 LKMAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------MMVWTPV 162 + AAV +++V+ A + A + AA P + + + A+ M VW P+ Sbjct: 6 ISSAAVATRTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPI 65 Query: 163 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 342 N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ +V E+ G Y Sbjct: 66 NMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENHKSPG-----Y 119 Query: 343 YDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YD RYWTMWKLPMFGC D QVL E+ C K++P A++R++ FDN +QV Sbjct: 120 YDGRYWTMWKLPMFGCTDATQVLAEVQECKKSYPQAWIRIIGFDNVRQV 168 [88][TOP] >UniRef100_A9TVU8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TVU8_PHYPA Length = 176 Score = 139 bits (349), Expect = 1e-31 Identities = 77/172 (44%), Positives = 101/172 (58%), Gaps = 11/172 (6%) Frame = +1 Query: 7 MAAVI----AKSSVSAAVARPARSSVRPMAALKPAV----KAAPVAAPAQANQ---MMVW 153 MA+++ A ++ S+ ++ +S + LK A KA +++ ++ M VW Sbjct: 1 MASIVVTPAAFAAASSGLSTSQSTSAKAFTGLKSATLFPSKAQTLSSVQNGSRVQCMQVW 60 Query: 154 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 333 P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF S+ N S S Sbjct: 61 NPIGQTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSNGVSRVNNS-------S 113 Query: 334 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC+D QVLREI C K FP YVR++ FDN KQV Sbjct: 114 PGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKKTFPGCYVRVLGFDNVKQV 165 [89][TOP] >UniRef100_A9T3X7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T3X7_PHYPA Length = 179 Score = 139 bits (349), Expect = 1e-31 Identities = 78/173 (45%), Positives = 101/173 (58%), Gaps = 12/173 (6%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPAR-----SSVRPMAALKPAVKAAPVAAP-------AQANQMMV 150 MA+ + S+ AA A PA SSV+ + LK +A A ++ M V Sbjct: 1 MASAVVSVSIVAA-ASPASVCRESSSVKQFSGLKSTTLSASKARRLSSVHNGSRVQCMQV 59 Query: 151 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 330 W P+ FETFSYLPPL+D+QIA QVD+++ IPC+EF +N S G Sbjct: 60 WNPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFS----GPG 115 Query: 331 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 S YYD RYWTMWKLPMFGC D QVLREI C ++FP +VR++ FD++KQV Sbjct: 116 SSGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQV 168 [90][TOP] >UniRef100_A9T3W5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9T3W5_PHYPA Length = 179 Score = 139 bits (349), Expect = 1e-31 Identities = 76/172 (44%), Positives = 101/172 (58%), Gaps = 11/172 (6%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPA----RSSVRPMAALKP-------AVKAAPVAAPAQANQMMVW 153 MA+ + S+ AA + A SSV+ + LK A + + V ++ M VW Sbjct: 1 MASAVVSVSIVAAASPAAVCRESSSVKQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVW 60 Query: 154 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 333 P+ FETFSYLPPL+D+QIA QVD+++ IPC+EF +N S G S Sbjct: 61 NPIGQPKFETFSYLPPLTDDQIAKQVDFMIQQNLIPCIEFDTVGSVSRTNFS----GPGS 116 Query: 334 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVLREI C ++FP +VR++ FD++KQV Sbjct: 117 SGYYDGRYWTMWKLPMFGCTDSAQVLREIQECKQSFPSCWVRVLGFDSKKQV 168 [91][TOP] >UniRef100_A9S8M9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9S8M9_PHYPA Length = 182 Score = 139 bits (349), Expect = 1e-31 Identities = 81/178 (45%), Positives = 98/178 (55%), Gaps = 17/178 (9%) Frame = +1 Query: 7 MAAVIAKSSV----------SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ----- 141 MA V+A SS S+ V+ +SV+ + LK A + A + Q Sbjct: 1 MATVVAASSAVAPAAAFGAASSGVSTSEATSVKAFSGLKSATLFSGNAQTLSSVQNGSRV 60 Query: 142 --MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAI 315 M VW P+ FETFSYLPPLSD+ IA QV+Y++ IPCLEF S+ N S Sbjct: 61 QCMQVWNPIGMTKFETFSYLPPLSDDAIAKQVEYMIQQKLIPCLEFDNSNGVSRVNNS-- 118 Query: 316 RFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 S YYD RYWTMWKLPMFGC+D QVLREI C FP YVR++ FDN KQV Sbjct: 119 -----SPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECKTTFPGCYVRVLGFDNVKQV 171 [92][TOP] >UniRef100_P26575 Ribulose bisphosphate carboxylase small chain 2A, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBSA_SOLTU Length = 180 Score = 139 bits (349), Expect = 1e-31 Identities = 75/174 (43%), Positives = 102/174 (58%), Gaps = 13/174 (7%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP------------AQANQMM 147 MA+ + S+ A A++S V P LK A + PV+ + M Sbjct: 1 MASSVMSSAAVATRGNGAQASMVAPFTGLKSAA-SFPVSRKQNLDITSIASNGGRVRCMQ 59 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+ G Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENNKSPG- 117 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL E+ KA+P A++R++ FDN +QV Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQV 167 [93][TOP] >UniRef100_Q08186 Ribulose bisphosphate carboxylase small chain 6, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS6_MESCR Length = 186 Score = 139 bits (349), Expect = 1e-31 Identities = 75/171 (43%), Positives = 99/171 (57%), Gaps = 12/171 (7%) Frame = +1 Query: 13 AVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVA---------APAQANQ---MMVWT 156 A +A ++ S + A S V P LK +V A PV P+ + M VW Sbjct: 9 AAVATTAASRSAGAQA-SMVAPFTGLK-SVSAFPVTRKSSNDLSTVPSNGGKVQCMQVWP 66 Query: 157 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 336 P+ K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G Sbjct: 67 PLGKKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG---- 121 Query: 337 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC DP QV+ E+ KA+P+A++R++ FDN +QV Sbjct: 122 -YYDGRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQV 171 [94][TOP] >UniRef100_P07180 Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic n=1 Tax=Solanum lycopersicum RepID=RBS3A_SOLLC Length = 180 Score = 139 bits (349), Expect = 1e-31 Identities = 74/174 (42%), Positives = 104/174 (59%), Gaps = 13/174 (7%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP------------AQANQMM 147 MA+ + S+ A A++S V P LK + + PV+ + + M Sbjct: 1 MASSVMSSAAVATRGNGAQASMVAPFTGLK-STASFPVSRKQNLDITSIASNGGRVSCMQ 59 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P+N K +ET SYLP LSDEQ+ ++++Y++ NGW+PCLEF E++ +V E+ G Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYRENHKSPG- 117 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL E+ KA+P A+VR++ FDN +QV Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGFDNVRQV 167 [95][TOP] >UniRef100_P19308 Ribulose bisphosphate carboxylase small chain SSU26, chloroplastic n=1 Tax=Lemna gibba RepID=RBS2_LEMGI Length = 177 Score = 139 bits (349), Expect = 1e-31 Identities = 75/174 (43%), Positives = 101/174 (58%), Gaps = 13/174 (7%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MM 147 MA+ + S+ + A A PA+S+ V P L+ +V A P A N M Sbjct: 1 MASSMMASTAAVARAGPAQSNMVAPFNGLRSSV-AFPATRKANKNLSTLPSNGGKVSCMQ 59 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + Sbjct: 60 VWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA------ 113 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 S YYD RYWTMWKLPMFGC D QV+ E+ KA+P+ +VR++ FDN++QV Sbjct: 114 -SPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQV 166 [96][TOP] >UniRef100_P69250 Ribulose bisphosphate carboxylase small chain, chloroplastic n=2 Tax=Nicotiana RepID=RBS1_NICSY Length = 180 Score = 139 bits (349), Expect = 1e-31 Identities = 75/175 (42%), Positives = 102/175 (58%), Gaps = 12/175 (6%) Frame = +1 Query: 1 LKMAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQM 144 L AAV +S+V+ A + V P LK A + PV+ + M Sbjct: 6 LSSAAVATRSNVAQA------NMVAPFTGLKSAA-SFPVSRKQNLDITSIASNGGRVQCM 58 Query: 145 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 324 VW P+N K +ET SYLP LS EQ+ ++V+Y++ NGW+PCLEF E++ +V E+ G Sbjct: 59 QVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEF-ETEHGFVYRENNKSPG 117 Query: 325 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL E+ KA+P A++R++ FDN +QV Sbjct: 118 -----YYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQV 167 [97][TOP] >UniRef100_C6T529 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=C6T529_SOYBN Length = 172 Score = 138 bits (348), Expect = 2e-31 Identities = 62/116 (53%), Positives = 76/116 (65%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M W P+NNK FET SYLPPLSDE IA ++DY++ GWIPCLEF E N Sbjct: 48 MKTWNPINNKKFETLSYLPPLSDESIAKEIDYMLKKGWIPCLEFDELGCVRRENSHMPE- 106 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWT+WKLPMF C D QVL+EI C + +P+AY+R +AFDNQ+ + Sbjct: 107 ------YYDGRYWTLWKLPMFACSDSSQVLKEIHECRRVYPNAYIRCLAFDNQRHM 156 [98][TOP] >UniRef100_A0FIP7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Camellia sinensis RepID=A0FIP7_CAMSI Length = 176 Score = 138 bits (348), Expect = 2e-31 Identities = 73/170 (42%), Positives = 99/170 (58%), Gaps = 13/170 (7%) Frame = +1 Query: 19 IAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAP------------AQANQMMVWTP 159 +A S +S+AV PA++S+ P LK + A PV + M VW P Sbjct: 1 MAASIISSAVVAPAQASMAAPFTGLK-STSAFPVTRKLDTDITSLASNGGRVQCMKVWPP 59 Query: 160 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 339 + K FET SYLPPL+ Q+ +VDY++ GWIPCLEF+ V R + S Sbjct: 60 LGLKKFETLSYLPPLTQAQLGKEVDYLIRLGWIPCLEFS------VQGGFVYREHNKSPG 113 Query: 340 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL+E+ C K +P +++R++ FDN++QV Sbjct: 114 YYDGRYWTMWKLPMFGCTDSSQVLKEVEECKKEYPQSFIRIIGFDNKRQV 163 [99][TOP] >UniRef100_P19311 Ribulose bisphosphate carboxylase small chain SSU5A, chloroplastic n=1 Tax=Lemna gibba RepID=RBS5_LEMGI Length = 177 Score = 138 bits (348), Expect = 2e-31 Identities = 75/174 (43%), Positives = 102/174 (58%), Gaps = 13/174 (7%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMM 147 MA+ + S+ + A A PA+SS V P L+ +V A P A + + M Sbjct: 1 MASSMMASTAAVARAGPAQSSMVAPFNGLRSSV-AFPATRKANNDLSTLPSNGGRVSCMQ 59 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + Sbjct: 60 VWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA------ 113 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 S YYD RYWTMWKLPMFGC D QV+ E+ KA+P+ +VR++ FDN++QV Sbjct: 114 -SPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQV 166 [100][TOP] >UniRef100_Q08183 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS3_MESCR Length = 183 Score = 138 bits (348), Expect = 2e-31 Identities = 72/167 (43%), Positives = 96/167 (57%), Gaps = 11/167 (6%) Frame = +1 Query: 22 AKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP-----------AQANQMMVWTPVNN 168 A ++++AA + V P LK +V A PV + M VW P+ Sbjct: 9 AATTMAAATTTAQANMVAPFNGLK-SVSAFPVTRKNNDITSVASNGGRVQCMQVWPPLGK 67 Query: 169 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 348 K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G YYD Sbjct: 68 KKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG-----YYD 121 Query: 349 NRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLPMFGC DP QV+ E+ KA+P+A++R++ FDN +QV Sbjct: 122 GRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQV 168 [101][TOP] >UniRef100_P22433 Ribulose bisphosphate carboxylase small chain S41, chloroplastic n=1 Tax=Nicotiana sylvestris RepID=RBS2_NICSY Length = 181 Score = 138 bits (347), Expect = 2e-31 Identities = 74/175 (42%), Positives = 101/175 (57%), Gaps = 14/175 (8%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPAR--SSVRPMAALKPAVKAAPVAAP------------AQANQM 144 MA +I S+ + A A S + P LK A + PV+ + M Sbjct: 1 MAFLIMSSAAAVATGTNAAQASMIAPFTGLKSAT-SFPVSRKQNLDITSIASNGGRVQCM 59 Query: 145 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 324 VW P+N K +ET SYLP LS+EQ+ +V+Y++ NGW+PCLEF E++ +V E+ G Sbjct: 60 QVWPPINKKKYETLSYLPDLSEEQLLREVEYLLKNGWVPCLEF-ETEHGFVYRENNKSPG 118 Query: 325 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL E+ KA+P A++R++ FDN +QV Sbjct: 119 -----YYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQV 168 [102][TOP] >UniRef100_Q42516 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Amaranthus hypochondriacus RepID=RBS1_AMAHP Length = 183 Score = 138 bits (347), Expect = 2e-31 Identities = 75/167 (44%), Positives = 97/167 (58%), Gaps = 11/167 (6%) Frame = +1 Query: 22 AKSSVSAAVARPARSSVRPMAALK-----PAVKAAP---VAAPAQANQ---MMVWTPVNN 168 A + +AA A S V P LK P K + + P+ + M VW PV Sbjct: 9 AAMATTAATAGAQASMVAPFNGLKSFATFPITKKSSNDFSSLPSNGGRVQCMQVWPPVGK 68 Query: 169 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 348 K FET SYLPPLSD Q+ AQV Y++ GWIPC+EF E + +V E+ G Y D Sbjct: 69 KKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEF-ELEHPFVYRENHRSPG-----YQD 122 Query: 349 NRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLPM+GC DP QVL E+ KA+P A++R++ FDN++QV Sbjct: 123 GRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGFDNKRQV 169 [103][TOP] >UniRef100_P26577 Ribulose bisphosphate carboxylase small chain 2C, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBSC_SOLTU Length = 180 Score = 137 bits (346), Expect = 3e-31 Identities = 74/174 (42%), Positives = 102/174 (58%), Gaps = 13/174 (7%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP------------AQANQMM 147 MA+ + S+ A A++S V P LK + + PV+ + M Sbjct: 1 MASSVMSSAAVATRGNGAQASMVAPFTGLK-STASFPVSRKQNLDITSIASNGGRVRCMQ 59 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E+ G Sbjct: 60 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYRENNKSPG- 117 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL E+ KA+P A++R++ FDN +QV Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGFDNVRQV 167 [104][TOP] >UniRef100_Q84NG4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Flaveria bidentis RepID=Q84NG4_FLABI Length = 173 Score = 137 bits (345), Expect = 4e-31 Identities = 74/166 (44%), Positives = 99/166 (59%), Gaps = 12/166 (7%) Frame = +1 Query: 28 SSVSAAVAR-PARSSVRPMAALKPAVKAAPVAA--------PAQANQ---MMVWTPVNNK 171 +S+ A VA P + V P LK A A PV P+ + M VW PV K Sbjct: 2 ASIPATVAAVPQTNMVAPFTGLK-ANAAFPVTKKVNGFSTLPSNGGRVQCMKVWPPVGKK 60 Query: 172 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 351 +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD Sbjct: 61 KYETLSYLPELTEAQLAKEVDYLIRNKWVPCLEF-ELEHGFVYRENASSPG-----YYDG 114 Query: 352 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLPMFGC D QV++E+ C K +P A++R++ FDN +QV Sbjct: 115 RYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQV 160 [105][TOP] >UniRef100_Q43110 Ribulose bisphosphate carboxylase small chain n=1 Tax=Pteris vittata RepID=Q43110_PTEVI Length = 174 Score = 137 bits (345), Expect = 4e-31 Identities = 74/169 (43%), Positives = 97/169 (57%), Gaps = 8/169 (4%) Frame = +1 Query: 7 MAAVIAKSSVSA-AVARPARSSVRPMAALKPAVKAAPVAAPAQA-------NQMMVWTPV 162 MA ++A +VSA + A A S + + LK AP A A + M+VW P Sbjct: 1 MATMLAAMAVSAPSCAAAAESLSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPY 60 Query: 163 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 342 +NK FET SYLPPL+++QIA QV+Y+V GW PC+EF Y + Y Sbjct: 61 DNKKFETLSYLPPLTNDQIAKQVEYMVRKGWTPCIEFDTIGSVYREHFHGSG-------Y 113 Query: 343 YDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YD RYW MWKLPMFGC D VLREI C K +P A++R++ FD ++QV Sbjct: 114 YDGRYWIMWKLPMFGCTDSGSVLREIAECAKEYPTAFIRVLGFDAKRQV 162 [106][TOP] >UniRef100_O48550 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Zantedeschia aethiopica RepID=RBS_ZANAE Length = 178 Score = 137 bits (345), Expect = 4e-31 Identities = 72/172 (41%), Positives = 99/172 (57%), Gaps = 11/172 (6%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ----------MMVW 153 MA+ + S+ + + PA+S+ V P A L + A +++ M VW Sbjct: 1 MASSMMVSTAAVSRTSPAQSNMVVPFAGLHSSAAFPVTRKFADSSKLPSNGLRVRCMQVW 60 Query: 154 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 333 P K FET SYLPPL+ EQ+ +VDY++ NGWIPC+EF + Y + S Sbjct: 61 PPEGKKKFETLSYLPPLTREQLGQEVDYLIRNGWIPCIEFCKVGFVYREYHN-------S 113 Query: 334 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL+E+ C+KA+PD + R++ FDN +QV Sbjct: 114 PGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSKAYPDYFNRIIGFDNTRQV 165 [107][TOP] >UniRef100_O65194 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Medicago sativa RepID=RBS_MEDSA Length = 180 Score = 137 bits (345), Expect = 4e-31 Identities = 61/120 (50%), Positives = 83/120 (69%) Frame = +1 Query: 130 QANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNES 309 + N M VW PV K FET SYLPPL++EQ+A +V+Y++ GWIPCLEF E +K +V E+ Sbjct: 54 RVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEF-ELEKGFVYREN 112 Query: 310 AIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMW+LP+FG D QVL+E+ C +PD+++R++ FDN +QV Sbjct: 113 HRSPG-----YYDGRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRIIGFDNVRQV 167 [108][TOP] >UniRef100_P05348 Ribulose bisphosphate carboxylase small chain, chloroplastic n=2 Tax=Zea mays RepID=RBS_MAIZE Length = 170 Score = 137 bits (345), Expect = 4e-31 Identities = 68/157 (43%), Positives = 92/157 (58%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 ++A S+ + A + +S+ A + + V+ + M VW NK FET SYL Sbjct: 6 MMASSATAVAPFQGLKSTASLPVARRSSRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYL 65 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS + + QVDY++ NGWIPCLEF++ Y N S S YYD RYWTMWKL Sbjct: 66 PPLSTDDLLKQVDYLLRNGWIPCLEFSKVGFVYREN-------STSPCYYDGRYWTMWKL 118 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQ 486 PMFGC D QV +E+ K++PDA+ R++ FDN KQ Sbjct: 119 PMFGCNDATQVYKELQEAIKSYPDAFHRVIGFDNIKQ 155 [109][TOP] >UniRef100_P26573 Ribulose bisphosphate carboxylase small chain 8B, chloroplastic n=1 Tax=Nicotiana plumbaginifolia RepID=RBS8_NICPL Length = 180 Score = 137 bits (345), Expect = 4e-31 Identities = 74/175 (42%), Positives = 102/175 (58%), Gaps = 12/175 (6%) Frame = +1 Query: 1 LKMAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQM 144 L AAV +S+V+ A + V P LK A + PV+ + M Sbjct: 6 LSSAAVATRSNVAQA------NMVAPFTGLKSAA-SFPVSRKQNLDITSIASNGGRVQCM 58 Query: 145 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 324 VW P+N K +ET SYLP LS EQ+ ++++Y++ +GW+PCLEF E+++ +V E G Sbjct: 59 QVWPPINKKKYETLSYLPDLSQEQLLSEIEYLLKSGWVPCLEF-ETERGFVYREHHHSPG 117 Query: 325 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL E+ KA+P A+VR++ FDN +QV Sbjct: 118 -----YYDGRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWVRIIGFDNVRQV 167 [110][TOP] >UniRef100_Q08184 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Mesembryanthemum crystallinum RepID=RBS4_MESCR Length = 183 Score = 137 bits (345), Expect = 4e-31 Identities = 71/167 (42%), Positives = 96/167 (57%), Gaps = 11/167 (6%) Frame = +1 Query: 22 AKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP-----------AQANQMMVWTPVNN 168 A ++++AA + V P LK ++ A PV + M VW P+ Sbjct: 9 AATTMAAATTTAQANMVAPFNGLK-SISAFPVTRKNNDITSVASNGGRVQCMQVWPPLGM 67 Query: 169 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 348 K FET SYLPPLS+E + +V Y++ NGW+PCLEF E +V E G YYD Sbjct: 68 KKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEF-EPTHGFVYREHGNTPG-----YYD 121 Query: 349 NRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLPMFGC DP QV+ E+ KA+P+A++R++ FDN +QV Sbjct: 122 GRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGFDNVRQV 168 [111][TOP] >UniRef100_Q00SG3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus tauri RepID=Q00SG3_OSTTA Length = 191 Score = 137 bits (344), Expect = 5e-31 Identities = 66/145 (45%), Positives = 84/145 (57%), Gaps = 24/145 (16%) Frame = +1 Query: 127 AQANQMMVWTPVNNK-----------------------MFETFSYLPPLSDEQIAAQVDY 237 A A MM+W P NK MFETFS+LPPLSD +IA Q Y Sbjct: 22 ANAKSMMIWRPHGNKYVSRKIKAHARGCVLAITRASRPMFETFSFLPPLSDAEIAKQCQY 81 Query: 238 IVANGWIPCLEFAESDKAYVSNESAIRF-GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLR 414 ++ NGW PC+EF +++ AY S++ LYYDNRYW MWKLPM+GC++ +VL Sbjct: 82 LLNNGWTPCIEFEDAEHAYADGHGWSNLDSSINSLYYDNRYWVMWKLPMYGCQNTDEVLA 141 Query: 415 EIVACTKAFPDAYVRLVAFDNQKQV 489 E+ K FPD Y+R+V FDN KQV Sbjct: 142 EVNMAKKCFPDCYIRVVGFDNIKQV 166 [112][TOP] >UniRef100_Q41351 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Stellaria longipes RepID=RBS_STELP Length = 180 Score = 137 bits (344), Expect = 5e-31 Identities = 73/173 (42%), Positives = 102/173 (58%), Gaps = 12/173 (6%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ------MMV 150 MA+ I S+ A + A++S V P LK P + + + A+ M V Sbjct: 1 MASSIMSSAAVATRSNGAQASMVAPFTGLKSNASFPVSRKTNLDITSIASNGGRVRCMQV 60 Query: 151 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 330 W P+N K +ET SYLP LS EQ+ ++++Y++ NGW+PCLEF E++ +V E G Sbjct: 61 WPPINMKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEF-ETEHGFVYREHTSSPG-- 117 Query: 331 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QV E+ KA+PDA++R++ FDN +QV Sbjct: 118 ---YYDGRYWTMWKLPMFGCTDATQVAAEVQEAKKAYPDAHIRIIGFDNVRQV 167 [113][TOP] >UniRef100_Q39746 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS4_FLAPR Length = 178 Score = 137 bits (344), Expect = 5e-31 Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 11/170 (6%) Frame = +1 Query: 13 AVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTP 159 A I+ + + + A PA+++ V P LK PA K A + +N M VW P Sbjct: 2 ASISSTVATVSRAAPAQANMVAPFTGLKSNAAFPATKKANDFSTLPSNGGRVQCMKVWPP 61 Query: 160 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 339 + K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G Sbjct: 62 LGKKKYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG----- 115 Query: 340 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QV++E+ C K +P A++R++ FDN +QV Sbjct: 116 YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQV 165 [114][TOP] >UniRef100_Q39744 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS2_FLAPR Length = 178 Score = 137 bits (344), Expect = 5e-31 Identities = 73/170 (42%), Positives = 103/170 (60%), Gaps = 11/170 (6%) Frame = +1 Query: 13 AVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTP 159 A I+ + + + A PA+++ V P LK PA K A + +N M VW P Sbjct: 2 ASISSTVATVSRAAPAQANMVAPFTGLKSNVAFPATKKANDFSTLPSNGGRVQCMKVWPP 61 Query: 160 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 339 + K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G Sbjct: 62 LGKKRYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG----- 115 Query: 340 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QV++E+ C K +P A++R++ FDN +QV Sbjct: 116 YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQV 165 [115][TOP] >UniRef100_Q9ZP07 Ribulose bisphosphate carboxylase small chain n=1 Tax=Cicer arietinum RepID=Q9ZP07_CICAR Length = 181 Score = 136 bits (343), Expect = 6e-31 Identities = 70/167 (41%), Positives = 98/167 (58%), Gaps = 16/167 (9%) Frame = +1 Query: 37 SAAVARPARSSVRPMAALKPAVKAAPVAA----------------PAQANQMMVWTPVNN 168 S+AV R+S P A+ P V +A + + M VW P+ Sbjct: 8 SSAVTTVKRASSVPSGAVAPFVGLKSMAGFPVRKVNNDITSIASNGGRVHCMQVWPPIGK 67 Query: 169 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 348 K FET SYLPPL++EQ+ +V+Y++ GW+PCLEF E +K +V E G YYD Sbjct: 68 KKFETLSYLPPLTEEQLLKEVEYLLRKGWVPCLEF-ELEKGFVYREHNNSPG-----YYD 121 Query: 349 NRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLP+FGC + +QVL+E+ KA+P+A+VR++ FDN +QV Sbjct: 122 GRYWTMWKLPLFGCTEAVQVLKELQEVVKAYPNAFVRIIGFDNVRQV 168 [116][TOP] >UniRef100_B9T055 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ricinus communis RepID=B9T055_RICCO Length = 180 Score = 136 bits (343), Expect = 6e-31 Identities = 71/172 (41%), Positives = 99/172 (57%), Gaps = 12/172 (6%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQMMVW 153 ++++ + S A P S V P LK + PV + + M VW Sbjct: 3 SSIVPSTMASLNRAAPQASMVAPFTGLKSS-SVFPVTRKQNNDITTLASNGGKVHCMQVW 61 Query: 154 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 333 PV K FET SYLPPLS+E +A +VDY++ GW+PCLEF E + +V E+ G Sbjct: 62 PPVGKKKFETLSYLPPLSEESLAKEVDYLLRMGWVPCLEF-ELEHGFVYRENHRSPG--- 117 Query: 334 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD R WTMWKLPMFGC D QVL+E+ KA+P++++R++ FDN++QV Sbjct: 118 --YYDGRCWTMWKLPMFGCTDSSQVLKELEEAKKAYPNSFIRIIGFDNKRQV 167 [117][TOP] >UniRef100_A4SA23 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4SA23_OSTLU Length = 177 Score = 136 bits (343), Expect = 6e-31 Identities = 60/110 (54%), Positives = 77/110 (70%), Gaps = 1/110 (0%) Frame = +1 Query: 163 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG-SVSCL 339 + +MFETFS+LPPLSD +I+ QV Y++ NGW PC+EF +S AY S++ Sbjct: 43 SRRMFETFSFLPPLSDAEISKQVQYLLNNGWTPCIEFEDSAHAYTDGHGWANMDTSINAG 102 Query: 340 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYDNRYW MWKLPM+GC++P +V+ EI C K FPD YVR+ FDN KQV Sbjct: 103 YYDNRYWVMWKLPMYGCQNPDEVIAEINTCIKCFPDCYVRVAGFDNIKQV 152 [118][TOP] >UniRef100_P07089 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Flaveria trinervia RepID=RBS_FLATR Length = 173 Score = 136 bits (343), Expect = 6e-31 Identities = 74/166 (44%), Positives = 99/166 (59%), Gaps = 12/166 (7%) Frame = +1 Query: 28 SSVSAAVAR-PARSSVRPMAALKPAVKAAPVAA--------PAQANQ---MMVWTPVNNK 171 +S+ A VA P + V P LK A A PV P+ + M VW PV K Sbjct: 2 ASIPATVAAVPQTNMVAPFTGLK-ANAAFPVTKKVNGFSTLPSNGGRVQCMKVWPPVGKK 60 Query: 172 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 351 +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD Sbjct: 61 KYETLSYLPELTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENASSPG-----YYDG 114 Query: 352 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLPMFGC D QV++E+ C K +P A++R++ FDN +QV Sbjct: 115 RYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQV 160 [119][TOP] >UniRef100_P10647 Ribulose bisphosphate carboxylase small chain C, chloroplastic n=1 Tax=Solanum tuberosum RepID=RBS0_SOLTU Length = 181 Score = 136 bits (343), Expect = 6e-31 Identities = 73/174 (41%), Positives = 99/174 (56%), Gaps = 13/174 (7%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVK------------AAPVAAPAQANQMM 147 MA+ I S+ A + A++S V P LK A + + + M Sbjct: 1 MASSIVSSAAVATRSNVAQASMVAPFTGLKSAASFPVTKKNNNVDITSLASNGGRVRCMQ 60 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P+N K +ET SYLP LSDEQ+ +V+Y++ NGW+PCLEF E++ +V E G Sbjct: 61 VWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEF-ETEHGFVYREHNSSPG- 118 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL E+ A+P A++R++ FDN +QV Sbjct: 119 ----YYDGRYWTMWKLPMFGCTDGTQVLAEVQEAKNAYPQAWIRIIGFDNVRQV 168 [120][TOP] >UniRef100_Q43115 Ribulose bisphosphate carboxylase small chain n=1 Tax=Malus x domestica x Pyrus communis RepID=Q43115_9ROSA Length = 179 Score = 136 bits (342), Expect = 8e-31 Identities = 74/173 (42%), Positives = 100/173 (57%), Gaps = 12/173 (6%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA-----------QANQMMV 150 MA+ + S A V+ PA++ V P LK + A PV + + M V Sbjct: 1 MASSMISSGTVATVSAPAQARMVAPFTGLKSS-SAFPVTRKSNDITSIASNGGRVQCMQV 59 Query: 151 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 330 W P+ K FET SYLPPLS E +A +VDY++ W+PCLEF E + +V E+ G Sbjct: 60 WPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEF-ELEHGFVYRENNRSPG-- 116 Query: 331 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL+E+ KA+P +++R++ FDN +QV Sbjct: 117 ---YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQV 166 [121][TOP] >UniRef100_B7FHB2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Medicago truncatula RepID=B7FHB2_MEDTR Length = 180 Score = 136 bits (342), Expect = 8e-31 Identities = 72/169 (42%), Positives = 99/169 (58%), Gaps = 18/169 (10%) Frame = +1 Query: 37 SAAVARPARSS------VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPV 162 SAAV +R+S V P LK + A PV + N M VW P+ Sbjct: 6 SAAVTTVSRASSTQANLVAPFTGLKSSA-AFPVTKKTNNDITSIASNGGRVNCMQVWPPI 64 Query: 163 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 342 K FET SYLPPL++EQ+A +V+Y++ GW+PCLEF E +K +V E+ G Y Sbjct: 65 GKKKFETLSYLPPLTEEQLAKEVEYLIRKGWVPCLEF-ELEKGFVYRENHSSPG-----Y 118 Query: 343 YDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YD RYWTMWKLP+FG D QVL+E+ A+P++++R++ FDN +QV Sbjct: 119 YDGRYWTMWKLPLFGATDSSQVLKELAEAKAAYPESFIRIIGFDNVRQV 167 [122][TOP] >UniRef100_A9YTZ9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Solanum tuberosum RepID=A9YTZ9_SOLTU Length = 181 Score = 136 bits (342), Expect = 8e-31 Identities = 70/169 (41%), Positives = 100/169 (59%), Gaps = 6/169 (3%) Frame = +1 Query: 1 LKMAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ------MMVWTPV 162 + AAV +++V+ A + A + AA P + + + A+ M VW P+ Sbjct: 6 ISSAAVATRTNVTQAGSMIAPFTGLKSAATFPVSRKQNLDITSIASNGGRVRCMQVWPPI 65 Query: 163 NNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLY 342 N K +ET SYLP L+DEQ+ +V+Y++ NGW+PCLEF E++ V E G Y Sbjct: 66 NTKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEF-ETEHGIVYREKHKSPG-----Y 119 Query: 343 YDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YD RYW MWKLPMFGC D QVL E+ C K++P A++R++ FDN +QV Sbjct: 120 YDGRYWNMWKLPMFGCTDATQVLAEVQECKKSYPQAWIRIIGFDNVRQV 168 [123][TOP] >UniRef100_A7LIT5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Corchorus olitorius RepID=A7LIT5_9ROSI Length = 183 Score = 136 bits (342), Expect = 8e-31 Identities = 75/174 (43%), Positives = 100/174 (57%), Gaps = 13/174 (7%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAP------------AQANQMM 147 MA+ + S+ A PA+++ V P LK A A P + M Sbjct: 1 MASAMMSSATVVNRASPAQATLVAPFTGLKSA-SAFPTTRKNNRDITSIASNGGRVQCMQ 59 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P+ K FET SYLP L+ Q+A +VDY++ +GWIPCLEF E + +V E G Sbjct: 60 VWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSGWIPCLEF-ELEHGFVYREHHHSPG- 117 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL+E+ KA+PDA++R++ FDN++QV Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPDAFIRIIGFDNRRQV 167 [124][TOP] >UniRef100_P08705 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Helianthus annuus RepID=RBS_HELAN Length = 178 Score = 136 bits (342), Expect = 8e-31 Identities = 72/170 (42%), Positives = 102/170 (60%), Gaps = 16/170 (9%) Frame = +1 Query: 28 SSVSAAVARPARSS------VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTP 159 +S+S++VA +R++ V P LK P K A + +N M VW P Sbjct: 2 ASISSSVATVSRTAPAQANMVAPFTGLKSNAAFPTTKKANDFSTLPSNGGRVQCMKVWPP 61 Query: 160 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 339 + K +ET SYLPPL++ Q+A +VDY++ W+PCLEF E + +V E+A G Sbjct: 62 LGLKKYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEF-ELEHGFVYRENARSPG----- 115 Query: 340 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QV++E+ C K +P A++R++ FDN +QV Sbjct: 116 YYDGRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRIIGFDNVRQV 165 [125][TOP] >UniRef100_Q9XGX5 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Amaranthus hypochondriacus RepID=RBS2_AMAHP Length = 184 Score = 136 bits (342), Expect = 8e-31 Identities = 63/116 (54%), Positives = 79/116 (68%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M VW PV K FET SYLPPLSD Q+ AQV Y++ GWIPC+EF E + +V E+ Sbjct: 61 MQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEF-ELEHPFVYRENHRSP 119 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G Y D RYWTMWKLPM+GC DP QVL E+ KA+P A++R++ FDN++QV Sbjct: 120 G-----YQDGRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPTAFIRIIGFDNKRQV 170 [126][TOP] >UniRef100_Q84QE5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Nicotiana tabacum RepID=Q84QE5_TOBAC Length = 180 Score = 135 bits (341), Expect = 1e-30 Identities = 72/175 (41%), Positives = 103/175 (58%), Gaps = 12/175 (6%) Frame = +1 Query: 1 LKMAAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQM 144 L AAV +++V+ A + V P LK A + PV+ + M Sbjct: 6 LSSAAVATRTNVAQA------NMVAPFTGLKSAA-SFPVSRKQNLDITSIASNGGRVQCM 58 Query: 145 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 324 VW P K +ET SYLP LS+EQ+ ++++Y++ NGW+PCLEF E+++ +V E+ G Sbjct: 59 QVWPPYGKKKYETLSYLPDLSEEQLLSEIEYLLKNGWVPCLEF-ETERGFVYRENNKSPG 117 Query: 325 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL E+ KA+P+A++R++ FDN +QV Sbjct: 118 -----YYDGRYWTMWKLPMFGCTDATQVLAEVGEAKKAYPEAWIRIIGFDNVRQV 167 [127][TOP] >UniRef100_Q6RWD8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Capsicum annuum RepID=Q6RWD8_CAPAN Length = 180 Score = 135 bits (341), Expect = 1e-30 Identities = 60/116 (51%), Positives = 80/116 (68%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M+VW P+N K +ET SYLP LSDEQ+ +++Y++ GW+PCLEF E++ +V E Sbjct: 58 MLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEF-ETEHGFVYREHHRSP 116 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QVL E+ KA+P A++R++ FDN +QV Sbjct: 117 G-----YYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWIRIIGFDNVRQV 167 [128][TOP] >UniRef100_Q5ZF97 Ribulose bisphosphate carboxylase small chain n=1 Tax=Plantago major RepID=Q5ZF97_PLAMJ Length = 177 Score = 135 bits (341), Expect = 1e-30 Identities = 73/170 (42%), Positives = 100/170 (58%), Gaps = 9/170 (5%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQ----ANQMMVWTP 159 MA+ + +S +A R + V P A LK PA + A A+ M VW P Sbjct: 1 MASSMLSTSSTAVAGRAQATMVAPYAGLKSTSVFPATRKTGNAKLARNAGKVRCMQVWPP 60 Query: 160 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 339 + K +ET SYLP L+ EQ+A ++DY++ + WIPCLEF E + +V E+ G Sbjct: 61 LGKKKYETLSYLPDLTVEQLAKEIDYLLRSKWIPCLEF-ELEHGFVYRENNRSPG----- 114 Query: 340 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QV+ E+ C K +P+A+VR++ FDN +QV Sbjct: 115 YYDGRYWTMWKLPMFGCTDASQVIAELEECKKEYPNAWVRIIGFDNVRQV 164 [129][TOP] >UniRef100_B9T1N0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ricinus communis RepID=B9T1N0_RICCO Length = 185 Score = 135 bits (341), Expect = 1e-30 Identities = 75/175 (42%), Positives = 105/175 (60%), Gaps = 14/175 (8%) Frame = +1 Query: 7 MAAVIAKSSVSAAVAR--PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ------M 144 MA+ + ++ A++ R PA++S V P LK P + AN M Sbjct: 1 MASSMLSTATVASLNRASPAQASMVAPFTGLKSTSAFPVTRKTNTDITTLANNGGRVQCM 60 Query: 145 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 324 VW P+ K FET SYLP L+ EQ+A +V+Y++ GW+PCLEF E + +V E+A G Sbjct: 61 QVWPPLGKKKFETLSYLPDLTREQLAKEVEYLLRKGWVPCLEF-ELEHGFVYRENARSPG 119 Query: 325 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D +QVL+E+ KA+P+++VR++ FDN +QV Sbjct: 120 -----YYDGRYWTMWKLPMFGCSDAVQVLKELDEAIKAYPNSFVRIIGFDNVRQV 169 [130][TOP] >UniRef100_O65349 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Capsicum annuum RepID=RBS_CAPAN Length = 187 Score = 135 bits (341), Expect = 1e-30 Identities = 60/116 (51%), Positives = 80/116 (68%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M+VW P+N K +ET SYLP LSDEQ+ +++Y++ GW+PCLEF E++ +V E Sbjct: 58 MLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEF-ETEHGFVYREHHRSP 116 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QVL E+ KA+P A++R++ FDN +QV Sbjct: 117 G-----YYDGRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWIRIIGFDNVRQV 167 [131][TOP] >UniRef100_P10797 Ribulose bisphosphate carboxylase small chain 2B, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=RBS2B_ARATH Length = 181 Score = 135 bits (341), Expect = 1e-30 Identities = 72/166 (43%), Positives = 98/166 (59%), Gaps = 13/166 (7%) Frame = +1 Query: 31 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 171 S +A V PA+++ V P LK + + PV A + + M VW P+ K Sbjct: 7 SSTAVVTSPAQATMVAPFTGLKSSA-SFPVTRKANNDITSITSNGGRVSCMKVWPPIGKK 65 Query: 172 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 351 FET SYLP LSD ++A +VDY++ N WIPC+EF E + +V E G YYD Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG-----YYDG 119 Query: 352 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLP+FGC D QVL+E+ C K +P A++R++ FDN +QV Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQV 165 [132][TOP] >UniRef100_Q9SEB9 Ribulose bisphosphate carboxylase small chain n=1 Tax=Lactuca sativa RepID=Q9SEB9_LACSA Length = 181 Score = 135 bits (340), Expect = 1e-30 Identities = 71/174 (40%), Positives = 103/174 (59%), Gaps = 13/174 (7%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPA------------QANQMM 147 MA++ + + + + PA++S+ P LK V A PV A + M Sbjct: 1 MASISSSAVATVNRSTPAQASLAAPFTGLKSNV-AFPVTKKANNDFSSLPSNGGRVQCMK 59 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P+ K +ET SYLPPLSDE ++ ++DY++ N W+PCLEF E + +V E G Sbjct: 60 VWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWVPCLEF-ELEHGFVYREHHHSPG- 117 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QV++E+ C K +P+A++R++ FD+ +QV Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDSVRQV 167 [133][TOP] >UniRef100_P10798 Ribulose bisphosphate carboxylase small chain 3B, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=RBS3B_ARATH Length = 181 Score = 135 bits (340), Expect = 1e-30 Identities = 72/166 (43%), Positives = 97/166 (58%), Gaps = 13/166 (7%) Frame = +1 Query: 31 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 171 S +A V PA+++ V P LK + A PV + + M VW P+ K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKK 65 Query: 172 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 351 FET SYLP LSD ++A +VDY++ N WIPC+EF E + +V E G YYD Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG-----YYDG 119 Query: 352 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLP+FGC D QVL+E+ C K +P A++R++ FDN +QV Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQV 165 [134][TOP] >UniRef100_Q9AUJ3 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Flaveria palmeri RepID=Q9AUJ3_FLAPA Length = 131 Score = 135 bits (339), Expect = 2e-30 Identities = 60/116 (51%), Positives = 80/116 (68%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M VW PV K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A Sbjct: 9 MKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLIRNKWVPCLEF-ELEHGFVYRENASSP 67 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QV++E+ C K +P A++R++ FDN +QV Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQV 118 [135][TOP] >UniRef100_Q9AQX3 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Flaveria palmeri RepID=Q9AQX3_FLAPA Length = 131 Score = 135 bits (339), Expect = 2e-30 Identities = 60/116 (51%), Positives = 80/116 (68%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M VW PV K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A Sbjct: 9 MKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLIRNKWVPCLEF-ELEHGFVYRENASSP 67 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QV++E+ C K +P A++R++ FDN +QV Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQV 118 [136][TOP] >UniRef100_A9TWX2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Physcomitrella patens subsp. patens RepID=A9TWX2_PHYPA Length = 182 Score = 135 bits (339), Expect = 2e-30 Identities = 80/177 (45%), Positives = 99/177 (55%), Gaps = 16/177 (9%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS---------VRPMAALK-------PAVKAAPVAAPAQAN 138 MA+ +A S+V A A SS V+ LK + K + V ++ Sbjct: 1 MASTVACSTVVAPAVFAAASSSVASSDSVTVKASTCLKGPTFFASKSQKLSSVQNGSRVQ 60 Query: 139 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 318 M VW P+ FETFSYLPPLSDE IA QV+Y++ IPCLEF + K VS ++ Sbjct: 61 CMQVWNPIGMTKFETFSYLPPLSDEAIAKQVEYMIQQKLIPCLEFDLNSKG-VSRDNNSS 119 Query: 319 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QVLREI C FP+ +VR++ FDN KQV Sbjct: 120 PG-----YYDGRYWTMWKLPMFGCNDSAQVLREIQECKTTFPNCWVRVLGFDNVKQV 171 [137][TOP] >UniRef100_A9NXP2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=A9NXP2_PICSI Length = 188 Score = 135 bits (339), Expect = 2e-30 Identities = 70/179 (39%), Positives = 105/179 (58%), Gaps = 19/179 (10%) Frame = +1 Query: 7 MAAVIAKSSVSAAVA---RPARSSVRPMAALKPAV---KAAPVAAPAQ------------ 132 MA+V+ S VS+ A P ++ V+ +A+ A+ K+ A A+ Sbjct: 1 MASVMMASMVSSTAALTTMPRKNGVQSLASSVSALNNLKSGSAAFSAKLEWEEKTTTNGS 60 Query: 133 -ANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNES 309 + M VW P+NN+ +ET SYLPPLS E + ++DY+++ GW+PCLEF + +N Sbjct: 61 RVHCMQVWPPINNRKYETLSYLPPLSQESLVKEIDYMISKGWVPCLEFDAVGQIQRTN-- 118 Query: 310 AIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQ 486 G + YYD RYW++WKLPMFGC + QVL E+ C KA+P+AY+R + FDN++Q Sbjct: 119 ----GVMVPGYYDGRYWSLWKLPMFGCTNSAQVLSELEECKKAYPNAYIRCLGFDNKRQ 173 [138][TOP] >UniRef100_Q84NG5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Flaveria bidentis RepID=Q84NG5_FLABI Length = 173 Score = 134 bits (338), Expect = 2e-30 Identities = 72/166 (43%), Positives = 100/166 (60%), Gaps = 12/166 (7%) Frame = +1 Query: 28 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAA--------PAQANQ---MMVWTPVNNK 171 +S+ A A A+++ V P LK A A PV P+ + M VW PV K Sbjct: 2 ASIPATFATVAQANMVAPFTGLK-ANAAFPVTKKVNGFSTLPSNGGRVQCMKVWPPVGKK 60 Query: 172 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 351 +ET SYLP L++ Q+A ++DY++ N W+PCLEF E + +V E+A G YYD Sbjct: 61 KYETLSYLPELTEAQLAKEIDYLIRNKWVPCLEF-ELEHGFVYRENARSPG-----YYDG 114 Query: 352 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLPMFGC D QV++E+ C K +P A++R++ FDN +QV Sbjct: 115 RYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQV 160 [139][TOP] >UniRef100_Q5I8Y4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Ammopiptanthus mongolicus RepID=Q5I8Y4_9FABA Length = 174 Score = 134 bits (338), Expect = 2e-30 Identities = 60/116 (51%), Positives = 80/116 (68%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M+VW P+ K FET SYLPPLS E + +V+Y++ GW+PCLEF E + +V E+ Sbjct: 50 MLVWPPLGRKKFETLSYLPPLSIESLTKEVEYLLRKGWVPCLEF-ELEHGFVYRENNRSP 108 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QV++E+ C K +P A+VR++ FDN++QV Sbjct: 109 G-----YYDGRYWTMWKLPMFGCSDASQVMKELEECKKEYPTAFVRIIGFDNKRQV 159 [140][TOP] >UniRef100_O24574 Ribulose bisphosphate carboxylase small chain n=1 Tax=Zea mays RepID=O24574_MAIZE Length = 170 Score = 134 bits (338), Expect = 2e-30 Identities = 67/157 (42%), Positives = 90/157 (57%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 ++A S+ + A + +S+ A + V+ + M VW NK FET SYL Sbjct: 6 MMASSATAVAPFQGLKSAASLPVARRSTRSLGNVSNGGRIRCMQVWPAYGNKKFETLSYL 65 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS + + QVDY++ NGWIPCLEF++ Y N S S YYD RYWTMWKL Sbjct: 66 PPLSTDDLLKQVDYLLRNGWIPCLEFSKLGFVYREN-------STSPCYYDGRYWTMWKL 118 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQ 486 PMFGC D QV +E+ A+PDA+ R++ FDN +Q Sbjct: 119 PMFGCTDATQVYKELQEAIAAYPDAFHRVIGFDNVRQ 155 [141][TOP] >UniRef100_A4SA21 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Ostreococcus lucimarinus CCE9901 RepID=A4SA21_OSTLU Length = 134 Score = 134 bits (338), Expect = 2e-30 Identities = 59/108 (54%), Positives = 76/108 (70%), Gaps = 1/108 (0%) Frame = +1 Query: 169 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG-SVSCLYY 345 +MFETFS+LPPLSD +I+ QV Y++ NGW PC+EF +S AY S++ YY Sbjct: 2 RMFETFSFLPPLSDAEISKQVQYLLNNGWTPCIEFEDSAHAYTDGHGWANMDTSINAGYY 61 Query: 346 DNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 DNRYW MWKLPM+GC++P +V+ EI C K FP+ YVR+ FDN KQV Sbjct: 62 DNRYWVMWKLPMYGCQNPDEVIAEINTCIKCFPECYVRVAGFDNIKQV 109 [142][TOP] >UniRef100_Q40250 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Lactuca sativa RepID=RBS_LACSA Length = 181 Score = 134 bits (338), Expect = 2e-30 Identities = 60/116 (51%), Positives = 80/116 (68%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M VW P+ K +ET SYLPPLSDE ++ ++DY++ N WIPCLEF E + +V E Sbjct: 58 MKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEF-ELEHGFVYREHHHSP 116 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QV++E+ C K +P+A++R++ FDN +QV Sbjct: 117 G-----YYDGRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGFDNIRQV 167 [143][TOP] >UniRef100_P19312 Ribulose bisphosphate carboxylase small chain SSU5B, chloroplastic n=1 Tax=Lemna gibba RepID=RBS6_LEMGI Length = 177 Score = 134 bits (338), Expect = 2e-30 Identities = 72/174 (41%), Positives = 101/174 (58%), Gaps = 13/174 (7%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMM 147 MA+ + S+ + A PA+++ V P L+ +V A P A + + M Sbjct: 1 MASSMMASTAAVARVGPAQTNMVAPFNGLRSSV-AFPATRKANNDLSTLPSNGGRVSCMQ 59 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P K FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + Sbjct: 60 VWPPEGLKKFETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENHA------ 113 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 S YYD RYWTMWKLPMFGC D QV+ E+ KA+P+ +VR++ FDN++QV Sbjct: 114 -SPGYYDGRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQV 166 [144][TOP] >UniRef100_Q39745 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS3_FLAPR Length = 173 Score = 134 bits (338), Expect = 2e-30 Identities = 71/165 (43%), Positives = 99/165 (60%), Gaps = 11/165 (6%) Frame = +1 Query: 28 SSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTPVNNKM 174 +S+ A VA A+++ V P LK P K + +N M VW P+ K Sbjct: 2 ASIPATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKR 61 Query: 175 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 354 +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD R Sbjct: 62 YETLSYLPNLTESQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYDGR 115 Query: 355 YWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YWTMWKLPMFGC D QV++E+ C K +P A++R++ FDN +QV Sbjct: 116 YWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQV 160 [145][TOP] >UniRef100_Q39743 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS1_FLAPR Length = 173 Score = 134 bits (338), Expect = 2e-30 Identities = 73/166 (43%), Positives = 101/166 (60%), Gaps = 12/166 (7%) Frame = +1 Query: 28 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAA--------PAQANQ---MMVWTPVNNK 171 +S+ A VA A+++ V P LK A A PV P+ + M VW P+ K Sbjct: 2 ASIPATVATVAQANMVAPFTGLK-ANAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKK 60 Query: 172 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 351 +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD Sbjct: 61 KYETLSYLPDLTEVQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYDG 114 Query: 352 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLPMFGC D QV++E+ C K +P A++R++ FDN +QV Sbjct: 115 RYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQV 160 [146][TOP] >UniRef100_P10796 Ribulose bisphosphate carboxylase small chain 1B, chloroplastic n=1 Tax=Arabidopsis thaliana RepID=RBS1B_ARATH Length = 181 Score = 134 bits (338), Expect = 2e-30 Identities = 71/166 (42%), Positives = 98/166 (59%), Gaps = 13/166 (7%) Frame = +1 Query: 31 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 171 S +A V PA+++ V P LK + + PV A + + M VW P+ K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-SFPVTRKANNDITSITSNGGRVSCMKVWPPIGKK 65 Query: 172 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 351 FET SYLP L+D ++A +VDY++ N WIPC+EF E + +V E G YYD Sbjct: 66 KFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG-----YYDG 119 Query: 352 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLP+FGC D QVL+E+ C K +P A++R++ FDN +QV Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQV 165 [147][TOP] >UniRef100_C1JZ18 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Ageratina adenophora RepID=C1JZ18_9ASTR Length = 178 Score = 134 bits (337), Expect = 3e-30 Identities = 74/170 (43%), Positives = 101/170 (59%), Gaps = 11/170 (6%) Frame = +1 Query: 13 AVIAKSSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTP 159 A I+ S + + A PA+++ V P LK PA K A + N M VW P Sbjct: 2 ASISSSVATVSRAAPAQANMVAPFTGLKSNAAFPATKKANDFSTLPNNGGRVQCMKVWPP 61 Query: 160 VNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCL 339 + K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E A G Sbjct: 62 LGLKKYETLSYLPTLTETQLAKEVDYLLRNKWVPCLEF-ELEHGFVYREHARSPG----- 115 Query: 340 YYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD R+WTMWKLPMFGC D QVL+E+ C K +P A++R++ FDN +QV Sbjct: 116 YYDGRHWTMWKLPMFGCTDSAQVLKEVGECKKEYPQAWIRIIGFDNVRQV 165 [148][TOP] >UniRef100_O22573 Ribulose bisphosphate carboxylase small chain 3, chloroplastic n=1 Tax=Fritillaria agrestis RepID=RBS3_FRIAG Length = 179 Score = 134 bits (337), Expect = 3e-30 Identities = 74/172 (43%), Positives = 98/172 (56%), Gaps = 12/172 (6%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA-----------QANQMMVW 153 +A + S +AA A PA++S V P LK A PA + M VW Sbjct: 4 SATMLSSVATAARAAPAQASMVAPFVGLKSASAFPVTQKPATGLSTLPSNGGRVQCMKVW 63 Query: 154 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 333 V K FET SYLP LS E + Q++Y++ NGW+PCLEF S + +VS ++ G Sbjct: 64 PIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEF--SLEGFVSRDNNKSPG--- 118 Query: 334 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QV++E C K +P A++R++ FDN +QV Sbjct: 119 --YYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQV 168 [149][TOP] >UniRef100_B6RHQ5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Miscanthus x giganteus RepID=B6RHQ5_9POAL Length = 121 Score = 134 bits (336), Expect = 4e-30 Identities = 60/113 (53%), Positives = 75/113 (66%) Frame = +1 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW NK FET SYLPPL++EQ+ QVDY++ N W+PCLEF++ Y N S Sbjct: 1 VWPAYGNKKFETLSYLPPLTEEQLLKQVDYLLRNNWVPCLEFSKEGFVYREN-------S 53 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQ 486 S YYD RYWTMWKLPMFGC D QV +E+ ++PDAYVR++ FDN +Q Sbjct: 54 TSPCYYDGRYWTMWKLPMFGCTDASQVYKELQEAIASYPDAYVRILGFDNIRQ 106 [150][TOP] >UniRef100_Q02980 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Malus sp. RepID=RBS_MALSP Length = 183 Score = 134 bits (336), Expect = 4e-30 Identities = 75/177 (42%), Positives = 101/177 (57%), Gaps = 16/177 (9%) Frame = +1 Query: 7 MAAVIAKSSVSAAVA--RPARSSVR---PMAALKPAVKAAPVAAPA-----------QAN 138 MA+ + S A V+ RPA + R P LK + A+PV + + Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFTGLKSS-SASPVTRKSNDITSIASNGGRVQ 59 Query: 139 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 318 M VW P+ K FET SYLPPLS E +A +VDY++ W+PCLEF E + +V E+ Sbjct: 60 CMQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEF-ELEHGFVYRENHRS 118 Query: 319 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QVL+E+ KA+P +++R++ FDN +QV Sbjct: 119 PG-----YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQV 170 [151][TOP] >UniRef100_Q39749 Ribulose bisphosphate carboxylase small chain 7, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS7_FLAPR Length = 173 Score = 134 bits (336), Expect = 4e-30 Identities = 71/165 (43%), Positives = 99/165 (60%), Gaps = 11/165 (6%) Frame = +1 Query: 28 SSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTPVNNKM 174 +S+ A VA A+++ V P LK P K + +N M VW P+ K Sbjct: 2 ASIPATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLASNGGRVQCMKVWPPLGKKR 61 Query: 175 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 354 +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD R Sbjct: 62 YETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYDGR 115 Query: 355 YWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YWTMWKLPMFGC D QV++E+ C K +P A++R++ FDN +QV Sbjct: 116 YWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQV 160 [152][TOP] >UniRef100_Q39747 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS5_FLAPR Length = 173 Score = 134 bits (336), Expect = 4e-30 Identities = 71/165 (43%), Positives = 99/165 (60%), Gaps = 11/165 (6%) Frame = +1 Query: 28 SSVSAAVARPARSS-VRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWTPVNNKM 174 +S+ A VA A+++ V P LK P K + +N M VW P+ K Sbjct: 2 ASIPATVATVAQANMVAPFTGLKSNAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKKR 61 Query: 175 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 354 +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD R Sbjct: 62 YETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYDGR 115 Query: 355 YWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YWTMWKLPMFGC D QV++E+ C K +P A++R++ FDN +QV Sbjct: 116 YWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQV 160 [153][TOP] >UniRef100_Q106Z4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Musa acuminata RepID=Q106Z4_MUSAC Length = 180 Score = 133 bits (335), Expect = 5e-30 Identities = 72/173 (41%), Positives = 101/173 (58%), Gaps = 13/173 (7%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 150 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 3 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPSNGGRVQCMKV 61 Query: 151 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 330 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 62 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVGRENHRSPG-- 117 Query: 331 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D +QV++E+ C K +P A++R++ FDN +QV Sbjct: 118 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEECKKEYPKAFIRIIGFDNNRQV 167 [154][TOP] >UniRef100_P17673 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Trifolium repens RepID=RBS_TRIRP Length = 178 Score = 133 bits (335), Expect = 5e-30 Identities = 58/121 (47%), Positives = 82/121 (67%) Frame = +1 Query: 127 AQANQMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNE 306 ++ N M VW PV K FET SYLPPL+DEQ+ +V+Y++ GW+PC+EF E +K +V + Sbjct: 51 SRVNCMQVWPPVGKKKFETLSYLPPLTDEQLLKEVEYLLRKGWVPCVEF-ELEKGFVHRQ 109 Query: 307 SAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQ 486 G YYD RYWTMW+LP+FG D QVL+E+ C +P+A++R++ FDN +Q Sbjct: 110 YNSSPG-----YYDGRYWTMWRLPLFGTTDAAQVLKEVAECKAEYPEAFIRIIGFDNVRQ 164 Query: 487 V 489 V Sbjct: 165 V 165 [155][TOP] >UniRef100_P08135 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Raphanus sativus RepID=RBS_RAPSA Length = 181 Score = 133 bits (335), Expect = 5e-30 Identities = 67/155 (43%), Positives = 90/155 (58%) Frame = +1 Query: 25 KSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPL 204 KSS + V R + + +A+ V M VW P+ K FET SYLP L Sbjct: 28 KSSAAFPVTRKTNTDITSIASNGGRVSC-----------MKVWPPIGKKKFETLSYLPDL 76 Query: 205 SDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMF 384 SD ++A +VDY++ N WIPC+EF E + +V E G YYD RYWTMWKLP+F Sbjct: 77 SDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDGRYWTMWKLPLF 130 Query: 385 GCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 GC D QVL+E+ C K +P+A +R++ FDN +QV Sbjct: 131 GCTDSAQVLKEVQECKKEYPNALIRIIGFDNNRQV 165 [156][TOP] >UniRef100_Q8GRJ7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Coffea arabica RepID=Q8GRJ7_COFAR Length = 181 Score = 133 bits (334), Expect = 7e-30 Identities = 74/174 (42%), Positives = 102/174 (58%), Gaps = 13/174 (7%) Frame = +1 Query: 7 MAAVIAKSSVSAAVAR--PARSS-VRPMAALKPAV------KAAPVAAPA----QANQMM 147 MA+ + S+ A R PA++S V P LK A K+ + + A + M Sbjct: 1 MASSMISSAAVATTTRASPAQASMVAPFNGLKAASSFPISKKSVDITSLATNGGRVQCMQ 60 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P K +ET SYLP L+DEQ+ ++DY++ +GW+PCLEF E +K +V E G Sbjct: 61 VWPPRGLKKYETLSYLPDLTDEQLLKEIDYLIRSGWVPCLEF-ELEKGFVYREYHRSPG- 118 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPM+GC D QVL E+ C K +P+ +VR++ FDN +QV Sbjct: 119 ----YYDGRYWTMWKLPMYGCTDATQVLNEVGECLKEYPNCWVRIIGFDNVRQV 168 [157][TOP] >UniRef100_P24007 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Pyrus pyrifolia RepID=RBS_PYRPY Length = 183 Score = 133 bits (334), Expect = 7e-30 Identities = 71/176 (40%), Positives = 98/176 (55%), Gaps = 15/176 (8%) Frame = +1 Query: 7 MAAVIAKSSVSAAVA--RPARSSVRPMAALKPAVKAAPVAAPAQANQ------------- 141 MA+ + S A V+ RPA + R +A ++ ++N Sbjct: 1 MASSMISSGTVATVSADRPAPAQARMVAPFNGLKSSSAFPVTRKSNDITSIASNGGRVQC 60 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M VW P+ K FET SYLPPLS E +A +VDY++ W+PCLEF E + +V E+ Sbjct: 61 MQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEF-ELETGFVYRENHRSP 119 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QVL+E+ KA+P +++R++ FDN +QV Sbjct: 120 G-----YYDGRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGFDNVRQV 170 [158][TOP] >UniRef100_Q40004 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Hordeum vulgare RepID=RBS_HORVU Length = 174 Score = 133 bits (334), Expect = 7e-30 Identities = 68/158 (43%), Positives = 92/158 (58%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ S A + +S+ + + +A V+ + M VW K FET SYL Sbjct: 5 VMASSATSVAPFQGLKSTAGLPVSRRSNASSASVSNGGRIRCMQVWPIEGIKKFETLSYL 64 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS E + QVDY++ + W+PCLEF++ + R + S YYD RYWTMWKL Sbjct: 65 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMWKL 117 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 118 PMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNMRQV 155 [159][TOP] >UniRef100_Q39748 Ribulose bisphosphate carboxylase small chain 6, chloroplastic n=1 Tax=Flaveria pringlei RepID=RBS6_FLAPR Length = 173 Score = 133 bits (334), Expect = 7e-30 Identities = 72/166 (43%), Positives = 101/166 (60%), Gaps = 12/166 (7%) Frame = +1 Query: 28 SSVSAAVARPARSS-VRPMAALKPAVKAAPVAA--------PAQANQ---MMVWTPVNNK 171 +S+ A VA A+++ V P LK A A PV P+ + M VW P+ K Sbjct: 2 ASIPATVAAVAQANMVAPFTGLK-ANAAFPVTKKVNDFSTLPSNGGRVQCMKVWPPLGKK 60 Query: 172 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 351 + T SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A G YYD Sbjct: 61 KYXTLSYLPNLTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSPG-----YYDG 114 Query: 352 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLPMFGC D +QV++E+ C K +P A++R++ FDN +QV Sbjct: 115 RYWTMWKLPMFGCTDSVQVMKELQECKKEYPQAWIRIIGFDNVRQV 160 [160][TOP] >UniRef100_P04714 Ribulose bisphosphate carboxylase small chain SSU8, chloroplastic n=1 Tax=Petunia x hybrida RepID=RBS1_PETHY Length = 180 Score = 133 bits (334), Expect = 7e-30 Identities = 70/172 (40%), Positives = 100/172 (58%), Gaps = 12/172 (6%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQMMVW 153 ++VI+ ++V+ S V P LK AV + PV++ + M VW Sbjct: 3 SSVISSAAVATRTNVAQASMVAPFNGLKSAV-SFPVSSKQNLDITSIASNGGRVQCMQVW 61 Query: 154 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 333 P K +ET SYLP L+DEQ+ +++Y++ GW+PCLEF E++ +V E S Sbjct: 62 PPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEF-ETEHGFVYREY-----HAS 115 Query: 334 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL E+ KA+P+A++R++ FDN +QV Sbjct: 116 PRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQV 167 [161][TOP] >UniRef100_Q9FRZ5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum aestivum RepID=Q9FRZ5_WHEAT Length = 175 Score = 132 bits (333), Expect = 9e-30 Identities = 68/160 (42%), Positives = 93/160 (58%), Gaps = 1/160 (0%) Frame = +1 Query: 13 AVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFS 189 AV+A S+ S A + +S+ P++ V+ + +M VW K FET S Sbjct: 4 AVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRRMQVWPIEGIKKFETLS 63 Query: 190 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 369 YLPPLS E + QVDY++ + W+PCLEF++ + R + S YYD RYWTMW Sbjct: 64 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMW 116 Query: 370 KLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 KLPMFGC D QV+ E+ K +PDAYVR++ FDN +QV Sbjct: 117 KLPMFGCTDATQVINEVEEVKKEYPDAYVRIIGFDNMRQV 156 [162][TOP] >UniRef100_Q9AUJ5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Flaveria ramosissima RepID=Q9AUJ5_FLARA Length = 131 Score = 132 bits (333), Expect = 9e-30 Identities = 59/116 (50%), Positives = 80/116 (68%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M VW P+ K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+A Sbjct: 9 MKVWPPLGKKKYETLSYLPDLTEAQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENARSP 67 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QV++E+ C K +P A++R++ FDN +QV Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQV 118 [163][TOP] >UniRef100_Q9AUJ2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Flaveria palmeri RepID=Q9AUJ2_FLAPA Length = 131 Score = 132 bits (333), Expect = 9e-30 Identities = 60/116 (51%), Positives = 79/116 (68%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M VW PV K +ET SYLP L++ Q+A +VDY+ N W+PCLEF E + +V E+A Sbjct: 9 MKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLHRNKWVPCLEF-ELEHGFVYRENASSP 67 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QV++E+ C K +P A++R++ FDN +QV Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGFDNVRQV 118 [164][TOP] >UniRef100_Q5ZF94 Ribulose bisphosphate carboxylase small chain n=1 Tax=Plantago major RepID=Q5ZF94_PLAMJ Length = 174 Score = 132 bits (333), Expect = 9e-30 Identities = 71/160 (44%), Positives = 95/160 (59%), Gaps = 9/160 (5%) Frame = +1 Query: 37 SAAVARPARSSVRPMAALK------PAVKAAPVAAPAQANQ---MMVWTPVNNKMFETFS 189 SAA S V + LK A K V++P+ + M VW P K +ET S Sbjct: 8 SAATVTAQTSMVGQFSGLKFGSTFPIAKKTGRVSSPSSGLKVRCMQVWPPTGKKKYETLS 67 Query: 190 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 369 YLP L+ EQ+A ++DY++ + WIPCLEF E + +V E+A G YYD RYWTMW Sbjct: 68 YLPDLTVEQLAKEIDYLLRSKWIPCLEF-ELEHGFVYRENARSPG-----YYDGRYWTMW 121 Query: 370 KLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 KLPMFGC D QV+ E+ C K +P+A+VR++ FDN +QV Sbjct: 122 KLPMFGCTDASQVIAELEECKKEYPNAWVRIIGFDNVRQV 161 [165][TOP] >UniRef100_B7ZYT6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Zea mays RepID=B7ZYT6_MAIZE Length = 153 Score = 132 bits (333), Expect = 9e-30 Identities = 61/116 (52%), Positives = 75/116 (64%) Frame = +1 Query: 139 QMMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIR 318 +M VW NK FET SYLPPLS + + QVDY++ NGWIPCLEF++ Y N Sbjct: 30 RMQVWPAYGNKKFETLSYLPPLSTDDLLKQVDYLLRNGWIPCLEFSKLGFVYREN----- 84 Query: 319 FGSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQ 486 S S YYD RYWTMWKLPMFGC D QV +E+ A+PDA+ R++ FDN +Q Sbjct: 85 --STSPCYYDGRYWTMWKLPMFGCTDATQVYKELQEAIAAYPDAFHRVIGFDNVRQ 138 [166][TOP] >UniRef100_O22572 Ribulose bisphosphate carboxylase small chain 2, chloroplastic n=1 Tax=Fritillaria agrestis RepID=RBS2_FRIAG Length = 179 Score = 132 bits (333), Expect = 9e-30 Identities = 75/173 (43%), Positives = 100/173 (57%), Gaps = 13/173 (7%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAA---------PAQANQ---MMV 150 +A + S +AA PA++S V P LK A A PV P+ + M V Sbjct: 4 SATMLSSVATAACVAPAQASMVAPFVGLKSA-SAFPVTQKTVTGLSTLPSNGGRVQCMKV 62 Query: 151 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 330 W V K FET SYLP LS E + Q++Y++ NGW+PCLEF S + +VS ++ G Sbjct: 63 WPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEF--SLEGFVSRDNNKSPG-- 118 Query: 331 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QV++E C K +P A++R++ FDN +QV Sbjct: 119 ---YYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQV 168 [167][TOP] >UniRef100_P00872 Ribulose bisphosphate carboxylase small chain SSU1, chloroplastic n=1 Tax=Lemna gibba RepID=RBS1_LEMGI Length = 173 Score = 132 bits (333), Expect = 9e-30 Identities = 68/165 (41%), Positives = 91/165 (55%), Gaps = 14/165 (8%) Frame = +1 Query: 37 SAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ--------------MMVWTPVNNKM 174 +AAVAR + + A + A +AN M VW P K Sbjct: 5 TAAVARVRPAQTNMVGAFNGCRSSVAFPATRKANNDLSTLPSSGGRVSCMQVWPPEGLKK 64 Query: 175 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 354 FET SYLPPLS E +A +VDY++ N W+PC+EF++ Y N + S YYD R Sbjct: 65 FETLSYLPPLSVEDLAKEVDYLLRNDWVPCIEFSKEGFVYRENNA-------SPGYYDGR 117 Query: 355 YWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YWTMWKLPMFGC D QV+ E+ KA+P+ +VR++ FDN++QV Sbjct: 118 YWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFDNKRQV 162 [168][TOP] >UniRef100_Q306K0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica napus RepID=Q306K0_BRANA Length = 181 Score = 132 bits (332), Expect = 1e-29 Identities = 70/166 (42%), Positives = 97/166 (58%), Gaps = 13/166 (7%) Frame = +1 Query: 31 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 171 S +A V PA+++ V P LK + A PV A + + M VW PV K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKANNDITSIASNGGRVSCMKVWPPVGKK 65 Query: 172 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 351 FET SYLP L++ ++ +VDY++ N WIPC+EF E + +V E G YYD Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDG 119 Query: 352 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLP+FGC D QVL+E+ C +P+A++R++ FDN +QV Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQV 165 [169][TOP] >UniRef100_B7FMC2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Medicago truncatula RepID=B7FMC2_MEDTR Length = 181 Score = 132 bits (332), Expect = 1e-29 Identities = 72/174 (41%), Positives = 100/174 (57%), Gaps = 13/174 (7%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPAR---SSVRPMAALK-----PAVKA-----APVAAPAQANQMM 147 MA+ + SS V R + +V P LK P K + + + N M Sbjct: 1 MASSMISSSAMTTVNRASSVQSGAVAPFVGLKSMAGFPVTKVNKDITSITSNGGRVNCMQ 60 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P+ K FET SYLPPL+ EQ+A +V+Y++ GW+ CLEF E++K +V E+ G Sbjct: 61 VWPPIGKKKFETLSYLPPLTREQLAKEVEYLIRKGWVACLEF-ETEKGFVYRENHSSPG- 118 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLP+FG D QVL+E+ A+P+A+VR++ FDN +QV Sbjct: 119 ----YYDGRYWTMWKLPLFGATDASQVLKELDEVVVAYPNAFVRIIGFDNVRQV 168 [170][TOP] >UniRef100_B3H5S2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Arabidopsis thaliana RepID=B3H5S2_ARATH Length = 186 Score = 132 bits (332), Expect = 1e-29 Identities = 70/166 (42%), Positives = 96/166 (57%), Gaps = 13/166 (7%) Frame = +1 Query: 31 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 171 S +A V PA+++ V P LK + A PV + + M VW P+ K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKK 65 Query: 172 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 351 FET SYLP LSD ++A +VDY++ N WIPC+EF E + + R + YYD Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEF-ELEVINTKHGFVYREHGNTPGYYDG 124 Query: 352 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLP+FGC D QVL+E+ C K +P A++R++ FDN +QV Sbjct: 125 RYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQV 170 [171][TOP] >UniRef100_P27985 Ribulose bisphosphate carboxylase small chain F1, chloroplastic n=1 Tax=Brassica napus RepID=RBS2_BRANA Length = 181 Score = 132 bits (332), Expect = 1e-29 Identities = 70/166 (42%), Positives = 97/166 (58%), Gaps = 13/166 (7%) Frame = +1 Query: 31 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 171 S +A V PA+++ V P LK + A PV A + + M VW PV K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKANNDITSIASNGGRVSCMKVWPPVGKK 65 Query: 172 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 351 FET SYLP L++ ++ +VDY++ N WIPC+EF E + +V E G YYD Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDG 119 Query: 352 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLP+FGC D QVL+E+ C +P+A++R++ FDN +QV Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQV 165 [172][TOP] >UniRef100_O24634 Ribulose bisphosphate carboxylase small chain 1/4, chloroplastic n=1 Tax=Fritillaria agrestis RepID=RBS1_FRIAG Length = 179 Score = 132 bits (332), Expect = 1e-29 Identities = 72/172 (41%), Positives = 97/172 (56%), Gaps = 12/172 (6%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA-----------QANQMMVW 153 ++ + S +AA A PA++S V P LK PA + M VW Sbjct: 4 SSTMLSSVATAACAAPAQASMVAPFVGLKSTSAFPVTQKPATGLSTLPSNGGRVQCMKVW 63 Query: 154 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 333 V K FET SYLP LS E + Q++Y++ NGW+PCLEF S + +VS ++ G Sbjct: 64 PIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEF--SLEGFVSRDNNKSPG--- 118 Query: 334 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QV++E C K +P A++R++ FDN +QV Sbjct: 119 --YYDGRYWTMWKLPMFGCTDAAQVVKEAAECKKEYPAAFIRVIGFDNVRQV 168 [173][TOP] >UniRef100_P05346 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Brassica napus RepID=RBS1_BRANA Length = 181 Score = 132 bits (332), Expect = 1e-29 Identities = 70/166 (42%), Positives = 97/166 (58%), Gaps = 13/166 (7%) Frame = +1 Query: 31 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 171 S +A V PA+++ V P LK + A PV A + + M VW PV K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSS-SAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKK 65 Query: 172 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 351 FET SYLP L++ ++ +VDY++ N WIPC+EF E + +V E G YYD Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDG 119 Query: 352 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLP+FGC D QVL+E+ C +P+A++R++ FDN +QV Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQV 165 [174][TOP] >UniRef100_Q9FRZ2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum aestivum RepID=Q9FRZ2_WHEAT Length = 175 Score = 132 bits (331), Expect = 2e-29 Identities = 69/160 (43%), Positives = 94/160 (58%), Gaps = 1/160 (0%) Frame = +1 Query: 13 AVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFS 189 AV+A S+ S A + +S+ P++ + + V+ + M VW K FET S Sbjct: 4 AVMASSATSVAPFQGLKSTAGLPVSRRSSSAGLSSVSNGGRIRCMQVWPIEGIKKFETLS 63 Query: 190 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 369 YLPPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMW Sbjct: 64 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMW 116 Query: 370 KLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 KLPMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 117 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQV 156 [175][TOP] >UniRef100_Q8VX71 Ribulose bisphosphate carboxylase small chain n=1 Tax=Rumex obtusifolius RepID=Q8VX71_RUMOB Length = 181 Score = 132 bits (331), Expect = 2e-29 Identities = 66/163 (40%), Positives = 95/163 (58%), Gaps = 3/163 (1%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQ---MMVWTPVNNKMFE 180 +A +A+ S + A + ++ +A K++ ++ P+ + M VW P FE Sbjct: 8 SATVARPSAAQATVIAPFTGLKNIATFPTTRKSSDLSFPSNGGKVRCMQVWPPEGKIKFE 67 Query: 181 TFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYW 360 T SYLPPLS+ + AQ++Y++ NGW+PCLEF V + R S YYD RYW Sbjct: 68 TLSYLPPLSEADLLAQINYLLINGWVPCLEFD------VGPGAVYREHHHSPGYYDGRYW 121 Query: 361 TMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 TMWKLPMFGC D QV+ E+ KA+P A+VR++ FDN +QV Sbjct: 122 TMWKLPMFGCTDATQVVAELEEAKKAYPHAFVRIIGFDNVRQV 164 [176][TOP] >UniRef100_Q6A159 Ribulose bisphosphate carboxylase small chain n=1 Tax=Limonium gibertii RepID=Q6A159_9CARY Length = 154 Score = 132 bits (331), Expect = 2e-29 Identities = 60/116 (51%), Positives = 79/116 (68%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M VW P K FET SYLPPL E +A ++ Y++ GW+PCLEF E +AY+ E Sbjct: 33 MQVWPPEGLKKFETLSYLPPLDREGLANEISYLMRMGWVPCLEF-EVGEAYIHREYHNLP 91 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPM+GC DP QVL+E+ C+K +P A++R++ FDN++QV Sbjct: 92 G-----YYDGRYWTMWKLPMYGCTDPAQVLKEVDECSKLYPHAHIRILGFDNKRQV 142 [177][TOP] >UniRef100_P12468 Ribulose bisphosphate carboxylase small chain 4, chloroplastic n=1 Tax=Glycine max RepID=RBS4_SOYBN Length = 178 Score = 132 bits (331), Expect = 2e-29 Identities = 72/171 (42%), Positives = 91/171 (53%), Gaps = 10/171 (5%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 156 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGLPTRKTNNDITSIASNGGRVQCMQVWP 60 Query: 157 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 336 PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSLG---- 115 Query: 337 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL+E+ A+P+ ++R++ FDN +QV Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQV 165 [178][TOP] >UniRef100_P04715 Ribulose bisphosphate carboxylase small chain SSU11A, chloroplastic n=1 Tax=Petunia x hybrida RepID=RBS2_PETHY Length = 180 Score = 132 bits (331), Expect = 2e-29 Identities = 68/172 (39%), Positives = 99/172 (57%), Gaps = 12/172 (6%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAP------------AQANQMMVW 153 ++V++ ++V+ + S V P LK A + PV+ + M VW Sbjct: 3 SSVMSSAAVATSTNAAQASMVAPFTGLKSAA-SFPVSRKQNLDITSIASNGGRVQCMQVW 61 Query: 154 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 333 P K +ET SYLP L+DEQ+ +++Y++ GW+PCLEF E++ +V E S Sbjct: 62 PPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEF-ETEHGFVYREY-----HAS 115 Query: 334 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL E+ KA+P+A++R++ FDN +QV Sbjct: 116 PRYYDGRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGFDNVRQV 167 [179][TOP] >UniRef100_Q9SDY9 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena clauda RepID=Q9SDY9_9POAL Length = 168 Score = 131 bits (330), Expect = 2e-29 Identities = 66/158 (41%), Positives = 92/158 (58%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ S A + +S+ + + A V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSASSLGSVSNGGRIRCMQVWPTEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QV++E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRIIGFDNIRQV 151 [180][TOP] >UniRef100_Q84LN2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Citrus limon RepID=Q84LN2_CITLI Length = 119 Score = 131 bits (330), Expect = 2e-29 Identities = 61/116 (52%), Positives = 79/116 (68%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M VW P K FET SYLPPLSDE + +++Y++ +GWIPCLEF E +K +V E Sbjct: 7 MKVWPPTGLKKFETLSYLPPLSDEALLKEINYLLRSGWIPCLEF-ELEKGWVYREHHRSP 65 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QVL+E+ K +P ++VR++ FDN++QV Sbjct: 66 G-----YYDGRYWTMWKLPMFGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQV 116 [181][TOP] >UniRef100_Q43746 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica napus RepID=Q43746_BRANA Length = 181 Score = 131 bits (330), Expect = 2e-29 Identities = 73/172 (42%), Positives = 101/172 (58%), Gaps = 15/172 (8%) Frame = +1 Query: 19 IAKSSVSAA--VARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVW 153 +A S +S+A V+ PA+++ V P LK + A PV + N M VW Sbjct: 1 MASSMLSSATVVSSPAQAAMVAPFTGLKSSA-AFPVTRKTNTDITSIASNGGRVNCMKVW 59 Query: 154 TPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVS 333 PV K FET SYLP L+D ++A +VDY++ N WIPC+EF E + +V E G Sbjct: 60 PPVGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEF-ELEHGFVYREHGNTPG--- 115 Query: 334 CLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 Y D RYWTMWKLP+FGC D QVL+E+ C +P+A++R++ FDN +QV Sbjct: 116 --YNDGRYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQV 165 [182][TOP] >UniRef100_P31333 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Gossypium hirsutum RepID=RBS_GOSHI Length = 182 Score = 131 bits (330), Expect = 2e-29 Identities = 75/176 (42%), Positives = 104/176 (59%), Gaps = 15/176 (8%) Frame = +1 Query: 7 MAAVIAKSSVSAAV--ARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQ 141 MA+ + S+ A V + PA+++ V P LK A A PV A + Sbjct: 1 MASSMISSATIATVNCSSPAQANMVAPFTGLKSA-SAFPVTRKANNDITSLASNGGRVQC 59 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M VW P+ K FET SYLP L+ Q+A +VDY++ + WIPCLEF E ++ +V ++ Sbjct: 60 MQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEF-ELEEGFVHR----KY 114 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 S+ YYD RYWTMWKLPMFGC D QVL E+ C K +P+A++R++ FDN +QV Sbjct: 115 SSLPT-YYDGRYWTMWKLPMFGCTDSAQVLEELENCKKEYPNAFIRIIGFDNVRQV 169 [183][TOP] >UniRef100_O22645 Ribulose bisphosphate carboxylase small chain 5, chloroplastic n=1 Tax=Fritillaria agrestis RepID=RBS5_FRIAG Length = 179 Score = 131 bits (330), Expect = 2e-29 Identities = 75/173 (43%), Positives = 100/173 (57%), Gaps = 13/173 (7%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAA---------PAQANQ---MMV 150 +A + S +AA A PA++S V P LK A A PV P+ + M V Sbjct: 4 SATMLSSVATAACAAPAQASMVAPFVGLKSA-SAFPVTQKTATGLSTLPSNGGRVQCMKV 62 Query: 151 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 330 W V K FET SYLP LS E + Q++Y++ NGW+PCLEF S + +VS ++ G Sbjct: 63 WPIVGLKKFETLSYLPTLSVESLLKQIEYLIRNGWVPCLEF--SLEGFVSRDNNKSPG-- 118 Query: 331 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC QV++E C K +P A++R++ FDN +QV Sbjct: 119 ---YYDGRYWTMWKLPMFGCTGAAQVVKEAAECKKEYPAAFIRVIGFDNVRQV 168 [184][TOP] >UniRef100_P26667 Ribulose bisphosphate carboxylase small chain PW9, chloroplastic n=1 Tax=Triticum aestivum RepID=RBS2_WHEAT Length = 175 Score = 131 bits (330), Expect = 2e-29 Identities = 68/160 (42%), Positives = 94/160 (58%), Gaps = 1/160 (0%) Frame = +1 Query: 13 AVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFS 189 AV+A S+ + A + +S+ P++ + + V+ + M VW K FET S Sbjct: 4 AVMASSATTVAPFQGLKSTAGLPISCRSGSTGLSSVSNGGRIRCMQVWPIEGIKKFETLS 63 Query: 190 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 369 YLPPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMW Sbjct: 64 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMW 116 Query: 370 KLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 KLPMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 117 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNMRQV 156 [185][TOP] >UniRef100_Q9SAX2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Aegilops sharonensis RepID=Q9SAX2_9POAL Length = 165 Score = 131 bits (329), Expect = 3e-29 Identities = 66/158 (41%), Positives = 91/158 (57%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRYMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQV 151 [186][TOP] >UniRef100_Q9FRZ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum aestivum RepID=Q9FRZ4_WHEAT Length = 175 Score = 131 bits (329), Expect = 3e-29 Identities = 68/160 (42%), Positives = 92/160 (57%), Gaps = 1/160 (0%) Frame = +1 Query: 13 AVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFS 189 AV+A S+ S A + +S+ P++ V+ + M VW K FET S Sbjct: 4 AVMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLS 63 Query: 190 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 369 YLPPLS E + QVDY++ + W+PCLEF++ + R + S YYD RYWTMW Sbjct: 64 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMW 116 Query: 370 KLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 KLPMFGC D QV+ E+ K +PDAYVR++ FDN +QV Sbjct: 117 KLPMFGCTDATQVINEVEEVKKEYPDAYVRIIGFDNMRQV 156 [187][TOP] >UniRef100_Q9FEE4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Triticum aestivum RepID=Q9FEE4_WHEAT Length = 174 Score = 131 bits (329), Expect = 3e-29 Identities = 67/159 (42%), Positives = 92/159 (57%) Frame = +1 Query: 13 AVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 192 AV+A S+ + A + +S+ + + + V+ + M VW K FET SY Sbjct: 4 AVMASSATTVAPFQGLKSTAGLPVSRRSSGSLGRVSNGGRIRCMQVWPIEGIKKFETLSY 63 Query: 193 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 372 LPPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWK Sbjct: 64 LPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SSGYYDGRYWTMWK 116 Query: 373 LPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 LPMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 117 LPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQV 155 [188][TOP] >UniRef100_A9PJL4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa x Populus deltoides RepID=A9PJL4_9ROSI Length = 181 Score = 131 bits (329), Expect = 3e-29 Identities = 72/173 (41%), Positives = 102/173 (58%), Gaps = 13/173 (7%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMV 150 ++VI+ ++V+ PA+++ V P LK + A PV A + M V Sbjct: 3 SSVISSAAVATVNRTPAQANMVAPFNGLK-STSAFPVTRKANNDITSIASNGGRVQCMQV 61 Query: 151 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 330 W P K FET SYLP L+ EQ+A +++Y++ N W+PCLEF E +K +V E G Sbjct: 62 WPPTGLKKFETLSYLPDLTTEQLAREIEYLLRNKWVPCLEF-ELEKGWVYREHHQSPG-- 118 Query: 331 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC + QVL E+ KA+P+++VR++ FDN +QV Sbjct: 119 ---YYDGRYWTMWKLPMFGCTEASQVLIELEEAKKAYPNSFVRIIGFDNTRQV 168 [189][TOP] >UniRef100_A9PG69 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa RepID=A9PG69_POPTR Length = 182 Score = 131 bits (329), Expect = 3e-29 Identities = 72/174 (41%), Positives = 105/174 (60%), Gaps = 14/174 (8%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ-------------MM 147 +++I+ ++V+ PA+++ V P LK A A PV+ +AN M Sbjct: 4 SSMISSAAVATVNRTPAQANMVAPFNGLKSAA-AFPVST-RKANDITSIASNGGRVQCMQ 61 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P K FET SYLP L++E++A ++DY++ + W+PCLEF E +K +V E G Sbjct: 62 VWPPTGLKKFETLSYLPDLTEEELAKEIDYLLRSKWVPCLEF-ELEKGWVYREHHSSPG- 119 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC + QVL E+ KA+P+A++R++ FDN +QV Sbjct: 120 ----YYDGRYWTMWKLPMFGCTEASQVLLELEEAKKAYPNAFIRIIGFDNTRQV 169 [190][TOP] >UniRef100_O64416 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Marchantia paleacea RepID=RBS_MARPA Length = 180 Score = 131 bits (329), Expect = 3e-29 Identities = 71/168 (42%), Positives = 90/168 (53%), Gaps = 8/168 (4%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSSVRPMAALKPAV-------KAAPVAAPAQANQMMVWTPVNN 168 AAV+ + SAA + V A LK V + ++ + M VW P NN Sbjct: 8 AAVVTPFAASAASTTKSSQIVSVQAGLKAGVFGGKSEWQTKTQTNGSRVSCMQVWEPYNN 67 Query: 169 KMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYD 348 FET SYLPPLS + +A Q+DY++ +GW PC+EF + R GS YYD Sbjct: 68 LKFETLSYLPPLSQDALAKQIDYVIKSGWAPCIEFDVQG-------TVTREGSTMPGYYD 120 Query: 349 NRYWTMWKLPMFGCRDPMQVLREIVACTKAF-PDAYVRLVAFDNQKQV 489 RYWTMWKLPMFGC D VLREI C K + Y+R + FDN +QV Sbjct: 121 GRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIRCLGFDNTRQV 168 [191][TOP] >UniRef100_P00869 Ribulose bisphosphate carboxylase small chain 3C, chloroplastic n=1 Tax=Pisum sativum RepID=RBS2_PEA Length = 180 Score = 131 bits (329), Expect = 3e-29 Identities = 72/173 (41%), Positives = 99/173 (57%), Gaps = 12/173 (6%) Frame = +1 Query: 7 MAAVIAKSSVSAA--VARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMV 150 MA++I+ S+V+ +R ++V P LK P K +N M V Sbjct: 1 MASMISSSAVTTVSRASRGQSAAVAPFGGLKSMTGFPVKKVNTDITSITSNGGRVKCMQV 60 Query: 151 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 330 W P+ K FET SYLPPL+ +Q+ +V+Y++ GW+PCLEF E +K +V E G Sbjct: 61 WPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEF-ELEKGFVYREHNKSPG-- 117 Query: 331 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFG D QVL+E+ A+P A+VR++ FDN +QV Sbjct: 118 ---YYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQV 167 [192][TOP] >UniRef100_Q9T4H0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Manihot esculenta RepID=Q9T4H0_MANES Length = 184 Score = 130 bits (328), Expect = 3e-29 Identities = 75/176 (42%), Positives = 99/176 (56%), Gaps = 15/176 (8%) Frame = +1 Query: 7 MAAVIAKSSVSAAVAR--PARSS-VRPMAALKPAVKAAPVAAPAQANQ------------ 141 MA + ++ A++ R PA++S V P LK + A P A+ Sbjct: 1 MATSMLSTATVASINRASPAQASMVAPFTGLK-STSAFPATTKTSADITSLASNGGRVQC 59 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M VW K FET SYLPPLS EQ+A+++DY++ +GWIPCLEF E + +V Sbjct: 60 MQVWPTRGKKKFETLSYLPPLSREQLASEIDYLLRSGWIPCLEF-ELEHGFVYRAHGSLP 118 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QVL+E+ KA PD + R++ FDN +QV Sbjct: 119 G-----YYDGRYWTMWKLPMFGCTDSSQVLKELDELIKAHPDGFARIIGFDNVRQV 169 [193][TOP] >UniRef100_Q9SDY8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena clauda RepID=Q9SDY8_9POAL Length = 168 Score = 130 bits (328), Expect = 3e-29 Identities = 66/158 (41%), Positives = 92/158 (58%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ S A + +S+ + + A V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSASSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QV++E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRIIGFDNIRQV 151 [194][TOP] >UniRef100_Q9AXP2 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Citrus reticulata RepID=Q9AXP2_CITRE Length = 118 Score = 130 bits (328), Expect = 3e-29 Identities = 60/116 (51%), Positives = 78/116 (67%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M VW P K FET SYLPPLSDE + ++ Y++ +GWIPCLEF E +K +V E Sbjct: 2 MQVWPPTGLKKFETLSYLPPLSDEALLKEISYLLRSGWIPCLEF-ELEKGWVYREHHSSP 60 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPM+GC D QVL+E+ K +P ++VR++ FDN++QV Sbjct: 61 G-----YYDGRYWTMWKLPMYGCTDATQVLKEVGEVQKEYPHSFVRIIGFDNKRQV 111 [195][TOP] >UniRef100_Q6A160 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Limonium gibertii RepID=Q6A160_9CARY Length = 153 Score = 130 bits (328), Expect = 3e-29 Identities = 60/116 (51%), Positives = 79/116 (68%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M VW P K FET SYLPPL E +A ++ Y++ GW+PCLEF E +AY+ E Sbjct: 33 MQVWPPEGLKKFETLSYLPPLDREGLANEISYLMRMGWVPCLEF-EVGEAYIHREYHNLP 91 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPM+GC DP QVL+E+ C++ +P A+VR++ FDN++QV Sbjct: 92 G-----YYDGRYWTMWKLPMYGCTDPAQVLKEVDECSQLYPHAHVRILGFDNKRQV 142 [196][TOP] >UniRef100_C6SVL2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=C6SVL2_SOYBN Length = 178 Score = 130 bits (328), Expect = 3e-29 Identities = 72/171 (42%), Positives = 91/171 (53%), Gaps = 10/171 (5%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 156 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWA 60 Query: 157 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 336 PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSPG---- 115 Query: 337 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL+E+ A+P+ ++R++ FDN +QV Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQV 165 [197][TOP] >UniRef100_A9PHQ1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa RepID=A9PHQ1_POPTR Length = 181 Score = 130 bits (328), Expect = 3e-29 Identities = 71/173 (41%), Positives = 102/173 (58%), Gaps = 13/173 (7%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMV 150 ++VI+ ++V+ PA+++ V P LK + A PV A + M V Sbjct: 3 SSVISSAAVATVNRTPAQANMVAPFNGLK-STSAFPVTRKANNDITSIASNGGRVQCMQV 61 Query: 151 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 330 W P K FET SYLP L+ EQ+A +++Y++ N W+PCLEF E +K +V E G Sbjct: 62 WPPTGLKKFETLSYLPDLTTEQLAQEIEYLLRNKWVPCLEF-ELEKGWVYREHHQSPG-- 118 Query: 331 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC + QVL E+ KA+P++++R++ FDN +QV Sbjct: 119 ---YYDGRYWTMWKLPMFGCTEASQVLIELEEAKKAYPNSFIRIIGFDNTRQV 168 [198][TOP] >UniRef100_P08474 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Cucumis sativus RepID=RBS_CUCSA Length = 189 Score = 130 bits (328), Expect = 3e-29 Identities = 74/175 (42%), Positives = 105/175 (60%), Gaps = 14/175 (8%) Frame = +1 Query: 7 MAAVIAKSSVSAAV--ARPARSS-VRPMAALKPA----------VKAAPVAAPAQANQMM 147 MA+ I S+ A+V A PA++S V P LK + V +A+ A Q M Sbjct: 1 MASSILSSAAVASVNSASPAQASMVAPFTGLKSSAGFPITRKNNVDITTLASNAGKVQCM 60 Query: 148 -VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 324 VW P+ + FET SYLP +S+EQ++ + DY++ NGW+PC+EF + +V E+ G Sbjct: 61 KVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEF-DIGSGFVYRENHRSPG 119 Query: 325 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 +YD RYWTMWKLPMFGC D QV++EI K +PDA++R++ FDN +QV Sbjct: 120 -----FYDGRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGFDNVRQV 169 [199][TOP] >UniRef100_P00871 Ribulose bisphosphate carboxylase small chain PWS4.3, chloroplastic n=1 Tax=Triticum aestivum RepID=RBS1_WHEAT Length = 174 Score = 130 bits (328), Expect = 3e-29 Identities = 67/159 (42%), Positives = 92/159 (57%) Frame = +1 Query: 13 AVIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 192 AV+A S+ + A + +S+ + + V+ + M VW K FET SY Sbjct: 4 AVMASSATTVAPFQGLKSTAGLPVSRRSRGSLGSVSNGGRIRCMQVWPIEGIKKFETLSY 63 Query: 193 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 372 LPPLS E ++ QVDY++ + W+PCLEF++ + + S S YYD RYWTMWK Sbjct: 64 LPPLSTEALSKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWK 116 Query: 373 LPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 LPMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 117 LPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQV 155 [200][TOP] >UniRef100_P00865 Ribulose bisphosphate carboxylase small chain 1, chloroplastic n=1 Tax=Glycine max RepID=RBS1_SOYBN Length = 178 Score = 130 bits (328), Expect = 3e-29 Identities = 71/171 (41%), Positives = 92/171 (53%), Gaps = 10/171 (5%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 156 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWP 60 Query: 157 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 336 P+ K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E + S Sbjct: 61 PIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREH-----NRSP 114 Query: 337 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL+E+ A+P+ ++R++ FDN +QV Sbjct: 115 XYYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQV 165 [201][TOP] >UniRef100_Q9SAW4 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Secale cereale RepID=Q9SAW4_SECCE Length = 165 Score = 130 bits (327), Expect = 4e-29 Identities = 67/158 (42%), Positives = 91/158 (57%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ S A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQV 151 [202][TOP] >UniRef100_Q9S7N3 Ribulose bisphosphate carboxylase small chain (Fragment) n=2 Tax=Triticeae RepID=Q9S7N3_AEGLO Length = 165 Score = 130 bits (327), Expect = 4e-29 Identities = 66/158 (41%), Positives = 91/158 (57%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQV 151 [203][TOP] >UniRef100_Q9FUJ5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=Q9FUJ5_SOYBN Length = 178 Score = 130 bits (327), Expect = 4e-29 Identities = 72/171 (42%), Positives = 91/171 (53%), Gaps = 10/171 (5%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 156 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDTISIASNGGRVQCMQVWP 60 Query: 157 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 336 PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSPG---- 115 Query: 337 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL+E+ A+P+ ++R++ FDN +QV Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQV 165 [204][TOP] >UniRef100_Q9FUJ4 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=Q9FUJ4_SOYBN Length = 178 Score = 130 bits (327), Expect = 4e-29 Identities = 72/171 (42%), Positives = 91/171 (53%), Gaps = 10/171 (5%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 156 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWP 60 Query: 157 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 336 PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSPG---- 115 Query: 337 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL+E+ A+P+ ++R++ FDN +QV Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQV 165 [205][TOP] >UniRef100_Q39832 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=Q39832_SOYBN Length = 178 Score = 130 bits (327), Expect = 4e-29 Identities = 72/171 (42%), Positives = 91/171 (53%), Gaps = 10/171 (5%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 156 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWP 60 Query: 157 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 336 PV K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSPG---- 115 Query: 337 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL+E+ A+P+ ++R++ FDN +QV Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQV 165 [206][TOP] >UniRef100_B1PLM0 Ribulose bisphosphate carboxylase small chain n=1 Tax=Hevea brasiliensis RepID=B1PLM0_HEVBR Length = 183 Score = 130 bits (327), Expect = 4e-29 Identities = 75/175 (42%), Positives = 99/175 (56%), Gaps = 14/175 (8%) Frame = +1 Query: 7 MAAVIAKSSVSAAVAR--PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ------M 144 MA+ + ++ A + R PA++S V P LK P + + A+ M Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCM 60 Query: 145 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 324 VW P K FETF YLPPL+ EQ+A +V+Y+ GW+PCLEF E + V E G Sbjct: 61 QVWPPRGKKFFETFLYLPPLTREQLAKEVEYLFCKGWVPCLEF-ELEHGTVYREYHRSPG 119 Query: 325 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D +QVL+E+ KA+PD Y R++ FDN +QV Sbjct: 120 -----YYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQV 169 [207][TOP] >UniRef100_A7YVW6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Actinidia chinensis RepID=A7YVW6_ACTCH Length = 176 Score = 130 bits (327), Expect = 4e-29 Identities = 67/165 (40%), Positives = 100/165 (60%), Gaps = 5/165 (3%) Frame = +1 Query: 10 AAVIAKSSVS----AAVARPARSSVRPMA-ALKPAVKAAPVAAPAQANQMMVWTPVNNKM 174 A+ I+ S+V+ A++A P P A +L +++ ++ + M VW P+ K Sbjct: 3 ASTISSSAVTSVTRASLASPFAGVKSPSAISLGRKLESGSRSSGFKVKCMQVWPPLGKKK 62 Query: 175 FETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNR 354 FET SYLPPL +E + Q+DY++ GWIPC+EF+ + +V E G YYD R Sbjct: 63 FETLSYLPPLPEEALLKQIDYLIRMGWIPCIEFSVGE-GFVYREHHHSPG-----YYDGR 116 Query: 355 YWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YWTMWKLPM+GC D QV E+ A K +PD+++R++ FDN++QV Sbjct: 117 YWTMWKLPMYGCTDSTQVRAEVEANKKEYPDSFIRIIGFDNKRQV 161 [208][TOP] >UniRef100_O22077 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Fagus crenata RepID=RBS_FAGCR Length = 182 Score = 130 bits (327), Expect = 4e-29 Identities = 73/175 (41%), Positives = 104/175 (59%), Gaps = 14/175 (8%) Frame = +1 Query: 7 MAAVIAKSSVSAAVAR--PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ------M 144 MA+ + S+ A V+R PA+++ V P LK PA + + + A+ M Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATRKSNNDITSLASNGGRVQCM 60 Query: 145 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 324 VW P+ + FET SYLPPLS E +A Q++Y++ GWIPCLEF E + +V E+ G Sbjct: 61 KVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEF-ELEHPFVYRENNRSPG 119 Query: 325 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYW MWKLPMFGC D QVL E+ +K +P +++R++ FDN++QV Sbjct: 120 -----YYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRIIGFDNKRQV 169 [209][TOP] >UniRef100_Q9SAX5 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Aegilops speltoides RepID=Q9SAX5_AEGSP Length = 165 Score = 130 bits (326), Expect = 6e-29 Identities = 66/158 (41%), Positives = 91/158 (57%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDATQVLSEVEEVKKEYPDAYVRVIGFDNLRQV 151 [210][TOP] >UniRef100_C6T1Y2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Glycine max RepID=C6T1Y2_SOYBN Length = 178 Score = 130 bits (326), Expect = 6e-29 Identities = 71/171 (41%), Positives = 91/171 (53%), Gaps = 10/171 (5%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 156 MA+ + S V R V P LK P K +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGMVAPFTGLKSMAGFPTRKTNNDITSIASNGGRVQCMQVWP 60 Query: 157 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 336 P+ K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 PIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHNRSPG---- 115 Query: 337 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL+E+ A+P+ ++R++ FDN +QV Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGFDNVRQV 165 [211][TOP] >UniRef100_A1YN03 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica rapa RepID=A1YN03_BRACM Length = 181 Score = 130 bits (326), Expect = 6e-29 Identities = 69/166 (41%), Positives = 96/166 (57%), Gaps = 13/166 (7%) Frame = +1 Query: 31 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 171 S +A V PA+++ V P LK + A PV A + + M VW PV K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSS-SAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKK 65 Query: 172 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 351 FET SYLP L++ ++ +VDY++ N WIPC+E E + +V E G YYD Sbjct: 66 KFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEL-ELEHGFVYREHGSTPG-----YYDG 119 Query: 352 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLP+FGC D QVL+E+ C +P+A++R++ FDN +QV Sbjct: 120 RYWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQV 165 [212][TOP] >UniRef100_Q9ZWG6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Hordeum vulgare RepID=Q9ZWG6_HORVU Length = 165 Score = 129 bits (325), Expect = 8e-29 Identities = 65/158 (41%), Positives = 91/158 (57%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPL+ E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLTTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRIIGFDNLRQV 151 [213][TOP] >UniRef100_Q9ZRS6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Secale cereale RepID=Q9ZRS6_SECCE Length = 175 Score = 129 bits (325), Expect = 8e-29 Identities = 67/160 (41%), Positives = 93/160 (58%), Gaps = 1/160 (0%) Frame = +1 Query: 13 AVIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFS 189 AV+A S+ + A + +S+ P+ + + V+ + M VW K FET S Sbjct: 4 AVMASSATTVAPFQGLKSTAGLPVGRRSGSAGLSSVSNGGRIRCMQVWPIEGIKKFETLS 63 Query: 190 YLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMW 369 YLPPLS E + QVDY++ + W+PCLEF++ + + + S YYD RYWTMW Sbjct: 64 YLPPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNN-------SPGYYDGRYWTMW 116 Query: 370 KLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 KLPMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 117 KLPMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNMRQV 156 [214][TOP] >UniRef100_Q9SNZ6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena maroccana RepID=Q9SNZ6_9POAL Length = 168 Score = 129 bits (325), Expect = 8e-29 Identities = 66/158 (41%), Positives = 91/158 (57%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ S A + +S+ + + V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QV+RE+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDASQVIREVEEVKKEYPDAYVRIIGFDNIRQV 151 [215][TOP] >UniRef100_Q9AUJ6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Flaveria ramosissima RepID=Q9AUJ6_FLARA Length = 131 Score = 129 bits (325), Expect = 8e-29 Identities = 58/116 (50%), Positives = 79/116 (68%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M VW P+ K +ET SYLP L++ Q+A +VDY++ N W+PCLEF E + +V E+ Sbjct: 9 MKVWPPLGKKKYETLSYLPNLTETQLAKEVDYLLRNKWVPCLEF-ELEHGFVYRENHRSP 67 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QV++E+ C K +P A++R++ FDN +QV Sbjct: 68 G-----YYDGRYWTMWKLPMFGCTDSSQVMKELGECKKEYPQAWIRIIGFDNVRQV 118 [216][TOP] >UniRef100_Q64FQ1 Ribulose bisphosphate carboxylase small chain n=1 Tax=Fagus sylvatica RepID=Q64FQ1_FAGSY Length = 181 Score = 129 bits (325), Expect = 8e-29 Identities = 73/175 (41%), Positives = 104/175 (59%), Gaps = 14/175 (8%) Frame = +1 Query: 7 MAAVIAKSSVSAAVAR--PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ------M 144 MA+ + S+ A V+R PA+++ V P LK PA + + + A+ M Sbjct: 1 MASSMISSATVATVSRATPAQATMVAPFTGLKSTAAFPATQKSNNDITSLASNGGRVQCM 60 Query: 145 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 324 VW P+ + FET SYLPPLS E +A Q++Y++ GWIPCLEF E + +V E+ G Sbjct: 61 KVWPPLGLQKFETLSYLPPLSLESLAKQIEYLILKGWIPCLEF-ELEHPFVYRENNRSPG 119 Query: 325 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYW MWKLPMFGC D QVL E+ +K +P +++R++ FDN++QV Sbjct: 120 -----YYDGRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRIIGFDNKRQV 169 [217][TOP] >UniRef100_Q2V327 Ribulose bisphosphate carboxylase small chain n=1 Tax=Arabidopsis thaliana RepID=Q2V327_ARATH Length = 174 Score = 129 bits (325), Expect = 8e-29 Identities = 69/166 (41%), Positives = 94/166 (56%), Gaps = 13/166 (7%) Frame = +1 Query: 31 SVSAAVARPARSS-VRPMAALKPAVKAAPVAAPA------------QANQMMVWTPVNNK 171 S +A V PA+++ V P LK + A PV + + M VW P+ K Sbjct: 7 SSAAVVTSPAQATMVAPFTGLKSSA-AFPVTRKTNKDITSIASNGGRVSCMKVWPPIGKK 65 Query: 172 MFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDN 351 FET SYLP LSD ++A +VDY++ N WIPC+EF + G+ YYD Sbjct: 66 KFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFE------------LEHGNTPG-YYDG 112 Query: 352 RYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 RYWTMWKLP+FGC D QVL+E+ C K +P A++R++ FDN +QV Sbjct: 113 RYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQV 158 [218][TOP] >UniRef100_Q106Z3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Musa acuminata RepID=Q106Z3_MUSAC Length = 181 Score = 129 bits (325), Expect = 8e-29 Identities = 77/176 (43%), Positives = 100/176 (56%), Gaps = 15/176 (8%) Frame = +1 Query: 7 MAAVIAKSSVSAAVAR--PARSS-VRPMAALKPAVKAAPVAAPAQANQ------------ 141 MA+ + SS +A V+R PA+SS V P LK + A PV A A+ Sbjct: 1 MASSVMVSSAAAVVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPSNGGRVQC 59 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M VW K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ Sbjct: 60 MKVWPIEGKKKFETLSYLPTLVDEVLLKQIEYLLRSKWIPCLEF--SHEGFVWRENHRSP 117 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QV +E+ C K +P A+V ++ FDN +QV Sbjct: 118 G-----YYDGRYWTMWKLPMFGCTDATQVAKELEECKKEYPRAFVGIIGFDNNRQV 168 [219][TOP] >UniRef100_A9PJ78 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa x Populus deltoides RepID=A9PJ78_9ROSI Length = 182 Score = 129 bits (325), Expect = 8e-29 Identities = 71/174 (40%), Positives = 105/174 (60%), Gaps = 14/174 (8%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ-------------MM 147 +++I+ ++V+ PA+++ V P LK + A PV+ +AN M Sbjct: 4 SSMISSAAVATVHRTPAQANMVAPFNGLK-STAAFPVST-RKANDITSIASNGGRVQCMQ 61 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P K FET SYLP L++E++A ++DY++ + W+PCLEF E +K +V E G Sbjct: 62 VWPPTGLKKFETLSYLPDLTEEELAKEIDYLLRSKWVPCLEF-ELEKGWVHREHHSSPG- 119 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC + QVL E+ KA+P+A++R++ FDN +QV Sbjct: 120 ----YYDGRYWTMWKLPMFGCTEASQVLVELGEAKKAYPNAFIRIIGFDNTRQV 169 [220][TOP] >UniRef100_A9PFS6 Ribulose bisphosphate carboxylase small chain n=1 Tax=Populus trichocarpa RepID=A9PFS6_POPTR Length = 182 Score = 129 bits (325), Expect = 8e-29 Identities = 71/174 (40%), Positives = 104/174 (59%), Gaps = 14/174 (8%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ-------------MM 147 +++I+ ++V+ P +++ V P LK A A PV+ +AN M Sbjct: 4 SSMISSAAVATVNRTPVQANMVAPFNGLKSAA-AFPVST-RKANDITSIASNGGRVQCMQ 61 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW P K FET SYLP L++E++A ++DY++ + W+PCLEF E +K +V E G Sbjct: 62 VWPPTGLKKFETLSYLPDLTEEELAKEIDYLLRSKWVPCLEF-ELEKGWVYREHHSSPG- 119 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC + QVL E+ KA+P+A++R++ FDN +QV Sbjct: 120 ----YYDGRYWTMWKLPMFGCTEASQVLLELEEAKKAYPNAFIRIIGFDNTRQV 169 [221][TOP] >UniRef100_P29684 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Hevea brasiliensis RepID=RBS_HEVBR Length = 183 Score = 129 bits (325), Expect = 8e-29 Identities = 74/175 (42%), Positives = 100/175 (57%), Gaps = 14/175 (8%) Frame = +1 Query: 7 MAAVIAKSSVSAAVAR--PARSS-VRPMAALK-----PAVKAAPVAAPAQANQ------M 144 MA+ + ++ A + R PA++S V P LK P + + A+ M Sbjct: 1 MASSMLSTAAVACINRASPAQASMVAPFTGLKSTSAFPTTRKTTTDITSIASNGGRVQCM 60 Query: 145 MVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFG 324 VW P K +ET SYLPPL+ EQ+A +V+Y++ GW+PCLEF E + V E G Sbjct: 61 QVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEF-ELEHGTVYREYHRSPG 119 Query: 325 SVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D +QVL+E+ KA+PD Y R++ FDN +QV Sbjct: 120 -----YYDGRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGFDNVRQV 169 [222][TOP] >UniRef100_Q42823 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Glycine tabacina RepID=RBS_GLYTA Length = 178 Score = 129 bits (325), Expect = 8e-29 Identities = 72/171 (42%), Positives = 92/171 (53%), Gaps = 10/171 (5%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMVWT 156 MA+ + S V R +V P LK P K A +N M VW Sbjct: 1 MASSMISSPAVTTVNRAGAGTVAPFTGLKSMAGFPTRKTNNDIASIASNGGRVQCMQVWP 60 Query: 157 PVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSC 336 K FET SYLP L D Q+A +V+Y++ GWIPCLEF E + +V E G Sbjct: 61 TTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEF-ELEHGFVYREHHRSPG---- 115 Query: 337 LYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D QVL+E+ A+P+A++R++ FDN +QV Sbjct: 116 -YYDGRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNAFIRIIGFDNVRQV 165 [223][TOP] >UniRef100_Q9ZSS0 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena clauda RepID=Q9ZSS0_9POAL Length = 168 Score = 129 bits (324), Expect = 1e-28 Identities = 64/158 (40%), Positives = 92/158 (58%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSASLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QV++E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRIIGFDNIRQV 151 [224][TOP] >UniRef100_Q9SNZ8 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena clauda RepID=Q9SNZ8_9POAL Length = 168 Score = 129 bits (324), Expect = 1e-28 Identities = 65/158 (41%), Positives = 92/158 (58%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ + A + +S+ + + A V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSASSLGNVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QV++E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRIIGFDNIRQV 151 [225][TOP] >UniRef100_Q9SAW9 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Aegilops tauschii RepID=Q9SAW9_AEGTA Length = 165 Score = 129 bits (324), Expect = 1e-28 Identities = 66/158 (41%), Positives = 91/158 (57%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGIVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQV 151 [226][TOP] >UniRef100_Q9SAW8 Ribulose bisphosphate carboxylase small chain (Fragment) n=7 Tax=Triticeae RepID=Q9SAW8_TRITI Length = 165 Score = 129 bits (324), Expect = 1e-28 Identities = 66/158 (41%), Positives = 91/158 (57%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQV 151 [227][TOP] >UniRef100_Q9SAW7 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Triticum turgidum subsp. dicoccoides RepID=Q9SAW7_TRITU Length = 165 Score = 129 bits (324), Expect = 1e-28 Identities = 66/158 (41%), Positives = 91/158 (57%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVGRRSSGSLSSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQV 151 [228][TOP] >UniRef100_Q107A1 Ribulose bisphosphate carboxylase small chain (Fragment) n=3 Tax=Eumusa RepID=Q107A1_MUSAC Length = 161 Score = 129 bits (324), Expect = 1e-28 Identities = 70/169 (41%), Positives = 98/169 (57%), Gaps = 13/169 (7%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 150 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPGNGGRVQCMKV 59 Query: 151 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 330 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVGRENHRSPG-- 115 Query: 331 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDN 477 YYD RYWTMWKLPMFGC D +QV++E+ C K +P A++R++ FDN Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEECKKEYPKAFIRIIGFDN 161 [229][TOP] >UniRef100_Q106Z6 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa acuminata AAA Group RepID=Q106Z6_MUSAC Length = 161 Score = 129 bits (324), Expect = 1e-28 Identities = 70/169 (41%), Positives = 98/169 (57%), Gaps = 13/169 (7%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 150 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPSNGGRVQCMKV 59 Query: 151 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 330 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVGRENHRSPG-- 115 Query: 331 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDN 477 YYD RYWTMWKLPMFGC D +QV++E+ C K +P A++R++ FDN Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEECKKEYPKAFIRIIGFDN 161 [230][TOP] >UniRef100_A9NZM2 Ribulose bisphosphate carboxylase small chain n=1 Tax=Picea sitchensis RepID=A9NZM2_PICSI Length = 159 Score = 129 bits (324), Expect = 1e-28 Identities = 65/147 (44%), Positives = 84/147 (57%), Gaps = 12/147 (8%) Frame = +1 Query: 85 ALKPAVKAAPVAAPAQANQ------------MMVWTPVNNKMFETFSYLPPLSDEQIAAQ 228 AL A VAAP + + M VW P NN FET SYLP L+ EQ+ + Sbjct: 7 ALSSTAAVAAVAAPPKTSNGNGSSNGGRVRCMQVWPPYNNPKFETLSYLPRLTQEQLLKE 66 Query: 229 VDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMFGCRDPMQV 408 V+Y++ N W+PCLEF E ++GS YYD RYW MWKLPMFGC + QV Sbjct: 67 VEYLLRNKWVPCLEFDEDGII------KRKYGSTPG-YYDGRYWVMWKLPMFGCTEASQV 119 Query: 409 LREIVACTKAFPDAYVRLVAFDNQKQV 489 L E+ C KA+P A++R++ FDN +QV Sbjct: 120 LNEVNECAKAYPKAFIRVIGFDNVRQV 146 [231][TOP] >UniRef100_A1YMW8 Ribulose bisphosphate carboxylase small chain n=1 Tax=Brassica rapa RepID=A1YMW8_BRACM Length = 162 Score = 129 bits (324), Expect = 1e-28 Identities = 64/155 (41%), Positives = 91/155 (58%) Frame = +1 Query: 25 KSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYLPPL 204 KSS + V R A + + + V+ + + M VW PV K FET SYLP L Sbjct: 9 KSSSAFPVTRKANNDITSI-----------VSNGGRVSCMKVWPPVGKKKFETLSYLPDL 57 Query: 205 SDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMF 384 ++ ++ +VDY++ N WIPC+EF E + +V E G YYD RYWTMWKLP+F Sbjct: 58 TEVELGKEVDYLLRNKWIPCVEF-ELEHGFVYREHGSTPG-----YYDGRYWTMWKLPLF 111 Query: 385 GCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 GC D QVL+E+ C +P+A++R++ FDN +QV Sbjct: 112 GCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQV 146 [232][TOP] >UniRef100_Q9TLH3 Ribulose bisphosphate carboxylase small chain n=1 Tax=Manihot esculenta RepID=Q9TLH3_MANES Length = 184 Score = 129 bits (323), Expect = 1e-28 Identities = 61/116 (52%), Positives = 76/116 (65%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 M VW K FET SYLPPLS EQ+A+++DY++ +GWIPCLEF E + +V Sbjct: 60 MQVWPTRGKKKFETLSYLPPLSREQLASEIDYLLRSGWIPCLEF-ELEHGFVYRAHGSLP 118 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QVL+E+ KA PD + R++ FDN +QV Sbjct: 119 G-----YYDGRYWTMWKLPMFGCTDSSQVLKELDELIKAHPDGFARIIGFDNVRQV 169 [233][TOP] >UniRef100_Q9SNZ7 Ribulose bisphosphate carboxylase small chain (Fragment) n=2 Tax=Avena RepID=Q9SNZ7_9POAL Length = 168 Score = 129 bits (323), Expect = 1e-28 Identities = 65/158 (41%), Positives = 91/158 (57%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ S A + +S+ + + V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQELKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QV++E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRIIGFDNIRQV 151 [234][TOP] >UniRef100_Q9SAX6 Ribulose bisphosphate carboxylase small chain (Fragment) n=3 Tax=Triticeae RepID=Q9SAX6_WHEAT Length = 165 Score = 129 bits (323), Expect = 1e-28 Identities = 66/158 (41%), Positives = 91/158 (57%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSGSLGRVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQV 151 [235][TOP] >UniRef100_Q9SAX1 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Aegilops bicornis RepID=Q9SAX1_AEGBI Length = 164 Score = 129 bits (323), Expect = 1e-28 Identities = 67/158 (42%), Positives = 91/158 (57%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ S A + +S+ + + V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTGGLPVSRRSRGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD+RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDSRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQV 151 [236][TOP] >UniRef100_Q84Y16 Ribulose bisphosphate carboxylase small chain n=1 Tax=Chrysanthemum x morifolium RepID=Q84Y16_CHRMO Length = 179 Score = 129 bits (323), Expect = 1e-28 Identities = 73/168 (43%), Positives = 97/168 (57%), Gaps = 14/168 (8%) Frame = +1 Query: 28 SSVSAAVARPAR---SSVRPMAALKPAVKAAPV--------AAPAQANQ---MMVWTPVN 165 SS A V R S V P LK V A PV + P+ + M VW P+ Sbjct: 6 SSAVATVNRTTSAQASMVAPFTGLKSNV-AFPVTKKSNDFSSLPSNGGRVQCMKVWPPLG 64 Query: 166 NKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYY 345 K +ET SYLPPL++ Q+A +V+Y++ N W+PCLEF E + + E+ G YY Sbjct: 65 LKKYETLSYLPPLTETQLAKEVEYLLRNKWVPCLEF-ELEHGFPYRENNRSPG-----YY 118 Query: 346 DNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 D RYWTMWKLPMFGC D QVL+E+ C K +P ++VR++ FDN +QV Sbjct: 119 DGRYWTMWKLPMFGCNDASQVLKELNECKKEYPQSWVRIIGFDNVRQV 166 [237][TOP] >UniRef100_Q2QTJ7 Ribulose bisphosphate carboxylase small chain n=1 Tax=Oryza sativa Japonica Group RepID=Q2QTJ7_ORYSJ Length = 175 Score = 129 bits (323), Expect = 1e-28 Identities = 66/159 (41%), Positives = 94/159 (59%), Gaps = 1/159 (0%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 192 V+A S+ S A + +S+ P++ + V+ + + M VW K FET SY Sbjct: 5 VMASSATSVAPFQGLKSTAGLPVSRRSNSAGLGSVSNGGRISCMQVWPIEGIKKFETLSY 64 Query: 193 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 372 LPPL+ E + Q++Y++ + W+PCLEF++ Y N S YYD RYWTMWK Sbjct: 65 LPPLTVEDLLKQIEYLLRSKWVPCLEFSKVGFVYRENHR-------SPGYYDGRYWTMWK 117 Query: 373 LPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 LPMFGC D QVL+E+ KA+PDA+VR++ FDN +QV Sbjct: 118 LPMFGCTDATQVLKELEEAKKAYPDAFVRIIGFDNVRQV 156 [238][TOP] >UniRef100_Q106Y3 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa acuminata RepID=Q106Y3_MUSAC Length = 161 Score = 129 bits (323), Expect = 1e-28 Identities = 70/169 (41%), Positives = 98/169 (57%), Gaps = 13/169 (7%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 150 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPSNGGRVQCMEV 59 Query: 151 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 330 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVGRENHRSPG-- 115 Query: 331 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDN 477 YYD RYWTMWKLPMFGC D +QV++E+ C K +P A++R++ FDN Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEECKKEYPKAFIRIIGFDN 161 [239][TOP] >UniRef100_A5JPN4 Ribulose bisphosphate carboxylase small chain n=2 Tax=Musa acuminata RepID=A5JPN4_MUSAC Length = 180 Score = 129 bits (323), Expect = 1e-28 Identities = 72/174 (41%), Positives = 98/174 (56%), Gaps = 13/174 (7%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MM 147 +++++ S+ + A PA+SS V P LK A A PV A+ M Sbjct: 2 VSSMMVSSAATFTRASPAQSSMVAPFTGLKSA-SAFPVTRKPNADLSHLPSNGGRVQCMK 60 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW K FET SYLP L DE + Q++Y++ + WIPCLEF K +V E+ G Sbjct: 61 VWPIEGLKKFETLSYLPTLKDEALLKQIEYLLRSKWIPCLEFCP--KGFVWRENHRSPG- 117 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D +QV +E+ C K +P A++R++ FDN +QV Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDAVQVAKEVEECKKEYPHAFIRIIGFDNNRQV 167 [240][TOP] >UniRef100_P07689 Ribulose bisphosphate carboxylase small chain 3A, chloroplastic n=1 Tax=Pisum sativum RepID=RBS3_PEA Length = 180 Score = 129 bits (323), Expect = 1e-28 Identities = 71/173 (41%), Positives = 98/173 (56%), Gaps = 12/173 (6%) Frame = +1 Query: 7 MAAVIAKSSVSAA--VARPARSSVRPMAALK-----PAVKAAPVAAPAQANQ-----MMV 150 MA++I+ S+V+ + ++V P LK P K +N M V Sbjct: 1 MASMISSSAVTTVSRASTVQSAAVAPFGGLKSMTGFPVKKVNTDITSITSNGGRVKCMQV 60 Query: 151 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 330 W P+ K FET SYLPPL+ +Q+ +V+Y++ GW+PCLEF E +K +V E G Sbjct: 61 WPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEF-ELEKGFVYREHNKSPG-- 117 Query: 331 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFG D QVL+E+ A+P A+VR++ FDN +QV Sbjct: 118 ---YYDGRYWTMWKLPMFGTTDASQVLKELDEVVAAYPQAFVRIIGFDNVRQV 167 [241][TOP] >UniRef100_Q9ZWG9 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Triticum timopheevii subsp. armeniacum RepID=Q9ZWG9_TRITI Length = 165 Score = 128 bits (322), Expect = 2e-28 Identities = 66/158 (41%), Positives = 91/158 (57%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSGSLGRVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDATQVLSEVEEVKKEYPDAYVRVIGFDNLRQV 151 [242][TOP] >UniRef100_Q9ZWG3 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Triticum urartu RepID=Q9ZWG3_9POAL Length = 165 Score = 128 bits (322), Expect = 2e-28 Identities = 66/158 (41%), Positives = 91/158 (57%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ + A + +S+ + + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVSRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHYS-------SPGYYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDATQVLNEVEEVKKEYPDAYVRVIGFDNLRQV 151 [243][TOP] >UniRef100_Q9ZRS5 Ribulose bisphosphate carboxylase small chain n=1 Tax=Secale cereale RepID=Q9ZRS5_SECCE Length = 175 Score = 128 bits (322), Expect = 2e-28 Identities = 66/159 (41%), Positives = 91/159 (57%), Gaps = 1/159 (0%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVR-PMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSY 192 V+A S+ S A + +S+ P++ V+ + M VW K FET SY Sbjct: 5 VMASSATSVAPFQGLKSTAGLPVSRRSNGASLGSVSNGGRIRCMQVWPIEGIKKFETLSY 64 Query: 193 LPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWK 372 LPPL+ E + QVDY++ + W+PCLEF++ + R + S YYD RYWTMWK Sbjct: 65 LPPLTTEALLKQVDYLIRSKWVPCLEFSKVGFIF-------REHNASPGYYDGRYWTMWK 117 Query: 373 LPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 LPMFGC D QV+ E+ K +PDAYVR++ FDN +QV Sbjct: 118 LPMFGCTDATQVINEVEEVKKEYPDAYVRIIGFDNMRQV 156 [244][TOP] >UniRef100_Q9SP00 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Avena agadiriana RepID=Q9SP00_9POAL Length = 168 Score = 128 bits (322), Expect = 2e-28 Identities = 66/158 (41%), Positives = 93/158 (58%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ S A + +S+ + + V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS+E + Q+D+++ + W+PCLEF S ++ E +GS YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFRE----YGSTPG-YYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QV++E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRIIGFDNIRQV 151 [245][TOP] >UniRef100_Q9SDY7 Ribulose bisphosphate carboxylase small chain (Fragment) n=2 Tax=Avena RepID=Q9SDY7_9POAL Length = 168 Score = 128 bits (322), Expect = 2e-28 Identities = 65/158 (41%), Positives = 91/158 (57%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ S A + +S+ + + V+ + M VW K FET SYL Sbjct: 1 VMASSATSVAPFQGLKSTAGLPVSRRSNAGLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS+E + Q+D+++ + W+PCLEF S ++ E G YYD RYWTMWKL Sbjct: 61 PPLSEEALLKQIDFLIRSKWVPCLEF--SKVGFIFREHGSTPG-----YYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QV++E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDASQVIKEVEEVKKEYPDAYVRIIGFDNIRQV 151 [246][TOP] >UniRef100_Q9SAX3 Ribulose bisphosphate carboxylase small chain (Fragment) n=2 Tax=Aegilops speltoides RepID=Q9SAX3_AEGSP Length = 165 Score = 128 bits (322), Expect = 2e-28 Identities = 66/158 (41%), Positives = 90/158 (56%) Frame = +1 Query: 16 VIAKSSVSAAVARPARSSVRPMAALKPAVKAAPVAAPAQANQMMVWTPVNNKMFETFSYL 195 V+A S+ + A + +S+ + + V+ + M VW K FET SYL Sbjct: 1 VMASSATTVAPFQGLKSTAGLPVGRRSSGSLGSVSNGGRIRCMQVWPIEGIKKFETLSYL 60 Query: 196 PPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSVSCLYYDNRYWTMWKL 375 PPLS E + QVDY++ + W+PCLEF++ + + S S YYD RYWTMWKL Sbjct: 61 PPLSTEALLKQVDYLIRSKWVPCLEFSKVGFVFREHNS-------SPGYYDGRYWTMWKL 113 Query: 376 PMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 PMFGC D QVL E+ K +PDAYVR++ FDN +QV Sbjct: 114 PMFGCTDATQVLSEVEEVKKEYPDAYVRVIGFDNLRQV 151 [247][TOP] >UniRef100_Q7DM38 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Phaseolus vulgaris RepID=Q7DM38_PHAVU Length = 135 Score = 128 bits (322), Expect = 2e-28 Identities = 59/116 (50%), Positives = 76/116 (65%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 + VW V K FET SYLPPL+ +Q+A +VDY++ GW+PCLEF E + +V E Sbjct: 13 IQVWPTVGKKKFETLSYLPPLTKQQLAKEVDYLLRKGWVPCLEF-ELEHGFVYREHNKSP 71 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QVL+E+ A PD ++R++ FDN +QV Sbjct: 72 G-----YYDGRYWTMWKLPMFGCTDSSQVLKELYEAQTAHPDGFIRIIGFDNVRQV 122 [248][TOP] >UniRef100_Q43874 Ribulose bisphosphate carboxylase small chain n=1 Tax=Phaseolus vulgaris RepID=Q43874_PHAVU Length = 180 Score = 128 bits (322), Expect = 2e-28 Identities = 59/116 (50%), Positives = 76/116 (65%) Frame = +1 Query: 142 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 321 + VW V K FET SYLPPL+ +Q+A +VDY++ GW+PCLEF E + +V E Sbjct: 58 IQVWPTVGKKKFETLSYLPPLTKQQLAKEVDYLLRKGWVPCLEF-ELEHGFVYREHNKSP 116 Query: 322 GSVSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 G YYD RYWTMWKLPMFGC D QVL+E+ A PD ++R++ FDN +QV Sbjct: 117 G-----YYDGRYWTMWKLPMFGCTDSSQVLKELYEAQTAHPDGFIRIIGFDNVRQV 167 [249][TOP] >UniRef100_Q106Y4 Ribulose bisphosphate carboxylase small chain (Fragment) n=1 Tax=Musa acuminata RepID=Q106Y4_MUSAC Length = 161 Score = 128 bits (322), Expect = 2e-28 Identities = 71/169 (42%), Positives = 98/169 (57%), Gaps = 13/169 (7%) Frame = +1 Query: 10 AAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MMV 150 ++++ S+ + + A PA+SS V P LK + A PV A A+ M V Sbjct: 1 SSMMVSSAATVSRASPAQSSMVAPFTGLK-STSAFPVTRKANADLSHLPGNGGRVQCMKV 59 Query: 151 WTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGSV 330 W K FET SYLP L DE + Q++Y++ + WIPCLEF S + +V E+ G Sbjct: 60 WPIEGKKKFETLSYLPTLVDEPLVKQIEYLLRSKWIPCLEF--SHEGFVWRENHRSPG-- 115 Query: 331 SCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDN 477 YYD RYWTMWKLPMFGC D +QV++E+ C K +P A+VR++ FDN Sbjct: 116 ---YYDGRYWTMWKLPMFGCTDAVQVVKEVEECKKEYPKAFVRIIGFDN 161 [250][TOP] >UniRef100_O24045 Ribulose bisphosphate carboxylase small chain, chloroplastic n=1 Tax=Musa acuminata RepID=RBS_MUSAC Length = 180 Score = 128 bits (322), Expect = 2e-28 Identities = 71/174 (40%), Positives = 98/174 (56%), Gaps = 13/174 (7%) Frame = +1 Query: 7 MAAVIAKSSVSAAVARPARSS-VRPMAALKPAVKAAPVAAPAQANQ------------MM 147 +++++ S+ + A PA+SS V P LK A A PV A+ M Sbjct: 2 VSSMMVSSAATFTRASPAQSSMVAPFTGLKSA-SAFPVTRKPNADLSHLPSNGGRVQCMK 60 Query: 148 VWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRFGS 327 VW K FET SYLP + DE + Q++Y++ + WIPCLEF K +V E+ G Sbjct: 61 VWPIEGVKKFETLSYLPTMKDEALVKQIEYLLRSKWIPCLEFCP--KGFVWRENHRSPG- 117 Query: 328 VSCLYYDNRYWTMWKLPMFGCRDPMQVLREIVACTKAFPDAYVRLVAFDNQKQV 489 YYD RYWTMWKLPMFGC D +QV +E+ C K +P A++R++ FDN +QV Sbjct: 118 ----YYDGRYWTMWKLPMFGCTDAVQVAKEVEECKKEYPHAFIRIIGFDNNRQV 167